4015 190 42 32 chr10 1524 2418 -140314347 + L1MB4 LINE L1 5277 6179 -1 516 80 67 0 chr10 2434 2509 -140314256 + L1MB8 LINE L1 6099 6178 0 756 234 81 5 chr10 2950 3159 -140313606 - L1MB3 LINE L1 0 6183 5959 609 98 6 58 chr10 3583 3757 -140313008 + (CCCTAA)n Simple_repeat Simple_repeat 4 168 0 1523 195 0 27 chr10 4029 4321 -140312444 + AluSx SINE Alu 6 289 -23 2299 94 0 7 chr10 4609 4906 -140311859 + AluSq SINE Alu 1 295 -18 2233 102 7 0 chr10 5270 5565 -140311200 - AluSx SINE Alu -15 297 1 283 81 0 0 chr10 7295 7332 -140309433 + Alu SINE Alu 1 37 -262 2245 109 0 7 chr10 8393 8695 -140308070 - AluSx SINE Alu -12 300 1 422 188 12 0 chr10 8766 8846 -140307919 + AluJ/FRAM SINE Alu 231 311 -1 2379 100 0 0 chr10 8869 9180 -140307585 - AluSx SINE Alu -1 311 1 849 171 38 13 chr10 9180 9338 -140307427 - AluJb SINE Alu -8 304 143 1904 131 13 36 chr10 11525 11831 -140304934 - AluSx SINE Alu -13 299 1 185 108 27 0 chr10 12351 12388 -140304377 + (TAAG)n Simple_repeat Simple_repeat 2 39 0 1743 179 0 7 chr10 12865 13162 -140303603 + AluSx SINE Alu 1 295 -17 23 0 0 0 chr10 13162 13185 -140303580 + AT_rich Low_complexity Low_complexity 1 23 0 415 287 87 41 chr10 13641 13836 -140302929 + MIR SINE MIR 11 214 -48 1953 155 147 5 chr10 14043 14418 -140302347 + MSTA LTR MaLR 1 428 0 351 132 15 44 chr10 14609 14677 -140302088 + MER116 DNA Mariner 3 68 -12 29 0 0 0 chr10 14730 14759 -140302006 + AT_rich Low_complexity Low_complexity 1 29 0 1186 129 0 43 chr10 14762 14948 -140301817 + AluSx SINE Alu 1 178 -134 1523 136 143 8 chr10 15243 15508 -140301257 - AluSx SINE Alu -11 301 1 184 313 0 15 chr10 16010 16077 -140300688 - MIR SINE MIR 0 262 197 2063 130 20 0 chr10 16107 16407 -140300358 - AluSx SINE Alu -6 306 1 201 74 0 0 chr10 16502 16529 -140300236 + (CA)n Simple_repeat Simple_repeat 2 28 0 199 341 154 11 chr10 17676 17767 -140298998 - L2 LINE L2 -19 3253 3150 505 135 27 0 chr10 17805 17879 -140298886 + FRAM SINE Alu 49 124 -52 1315 217 71 0 chr10 18508 18789 -140297976 - AluJb SINE Alu 0 302 2 33 43 0 0 chr10 19125 19172 -140297593 + AT_rich Low_complexity Low_complexity 1 47 0 2409 61 0 0 chr10 19377 19673 -140297092 - AluY SINE Alu -15 296 1 187 194 81 48 chr10 19944 20006 -140296759 - L2 LINE L2 -618 2696 2633 28 29 0 0 chr10 22670 22705 -140294060 + AT_rich Low_complexity Low_complexity 1 35 0 204 198 209 55 chr10 23143 23234 -140293531 + L2 LINE L2 1860 1964 -1350 24802 39 8 0 chr10 23343 26978 -140289787 - L1PA4 LINE L1 -11 6144 2486 930 186 6 6 chr10 27092 27253 -140289512 - AluJb SINE Alu -15 297 137 1085 318 54 23 chr10 27262 27747 -140289018 + L2 LINE L2 2069 2568 -746 2245 234 114 76 chr10 28199 28504 -140288261 - L1M4 LINE L1 -408 5770 5478 1924 131 13 19 chr10 28504 28818 -140287947 - AluJb SINE Alu 0 312 1 2245 234 114 76 chr10 28818 30228 -140286537 - L1M4 LINE L1 -700 5478 3952 13169 160 42 23 chr10 30228 32601 -140284164 - Tigger1 DNA MER2_type 0 2418 1 2245 234 114 76 chr10 32601 32869 -140283896 - L1M4 LINE L1 -2226 3952 3696 800 255 200 43 chr10 32912 33476 -140283289 - HAL1 LINE L1 -571 1936 1284 893 210 99 67 chr10 33513 33885 -140282880 - HAL1 LINE L1 -1320 1187 804 246 333 114 21 chr10 34173 34408 -140282357 + L2 LINE L2 2732 2987 -285 1025 277 41 32 chr10 34442 34781 -140281984 - MLT1I LTR MaLR -6 403 62 240 258 52 0 chr10 34926 35023 -140281742 + HAL1 LINE L1 2331 2432 -75 672 289 213 49 chr10 35103 35774 -140280991 + L2 LINE L2 1718 2498 -816 1932 206 29 55 chr10 35907 36417 -140280348 + L1M4 LINE L1 4726 5222 -924 660 179 49 24 chr10 37547 37670 -140279095 + FLAM_A SINE Alu 1 126 -7 2683 172 25 25 chr10 37809 38298 -140278467 + L1MCa LINE L1 26 514 -5912 3316 206 47 47 chr10 38458 39396 -140277369 - MER52A LTR ERV1 -656 1099 85 4003 170 30 30 chr10 39735 40452 -140276313 - MER4E LTR ERV1 -3 776 57 4147 153 9 8 chr10 40452 41086 -140275679 - MER41B LTR ERV1 0 635 1 4003 170 30 30 chr10 41086 41144 -140275621 - MER4E LTR ERV1 -721 58 1 223 196 22 0 chr10 41464 41510 -140275255 + GA-rich Low_complexity Low_complexity 2 48 0 46 19 0 0 chr10 42284 42337 -140274428 + AT_rich Low_complexity Low_complexity 1 53 0 2313 112 0 0 chr10 42445 42748 -140274017 - AluSx SINE Alu -9 303 1 2039 111 7 7 chr10 42819 43099 -140273666 - AluSq SINE Alu -33 280 1 707 219 128 27 chr10 43291 43478 -140273287 - MER3 DNA MER1_type -3 206 1 2075 134 0 0 chr10 44243 44560 -140272205 - AluSx SINE Alu 0 317 1 2202 137 137 8 chr10 44631 45010 -140271755 - MSTA LTR MaLR 0 428 1 207 250 19 0 chr10 45401 45453 -140271312 + (TA)n Simple_repeat Simple_repeat 2 54 0 4335 85 15 102 chr10 45717 46444 -140270321 + MER4A LTR ERV1 1 664 0 1097 153 0 0 chr10 47315 47485 -140269280 - FRAM SINE Alu -6 170 1 2267 91 0 0 chr10 48198 48496 -140268269 + AluSc SINE Alu 1 298 -11 373 246 65 36 chr10 49138 49276 -140267489 - MIR3 SINE MIR -6 202 61 194 0 39 0 chr10 49305 49331 -140267434 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 791 245 50 10 chr10 49685 49885 -140266880 - MIR SINE MIR -37 225 18 239 297 228 0 chr10 49892 49993 -140266772 - MIR SINE MIR -134 128 5 1862 141 14 0 chr10 50005 50296 -140266469 + AluJb SINE Alu 1 295 -17 1560 177 0 11 chr10 50719 50996 -140265769 - AluJo SINE Alu -38 274 1 398 164 0 0 chr10 51360 51433 -140265332 + LTR30 LTR ERV1 552 624 -98 36 40 0 0 chr10 51437 51487 -140265278 + AT_rich Low_complexity Low_complexity 1 50 0 1348 176 33 0 chr10 53219 53464 -140263301 - Tigger7 DNA MER2_type -22 2469 2217 31 44 0 0 chr10 54083 54128 -140262637 + GC_rich Low_complexity Low_complexity 1 45 0 385 144 70 0 chr10 54368 54457 -140262308 + AluJ/FRAM SINE Alu 219 298 -4 1294 239 12 60 chr10 54459 54881 -140261884 - L1M4 LINE L1 -1293 4853 4455 1880 149 0 3 chr10 54881 55190 -140261575 - AluY SINE Alu -3 308 1 1294 239 12 60 chr10 55190 55248 -140261517 - L1M4 LINE L1 -1691 4455 4396 901 214 25 5 chr10 55248 55449 -140261316 - AluJo SINE Alu -21 291 87 290 56 0 0 chr10 55470 55506 -140261259 - MER31-int LTR ERV1 -3839 1097 1062 691 132 0 0 chr10 55506 55612 -140261153 + MLT2B3 LTR ERVL 1 106 -448 227 343 36 0 chr10 56408 56548 -140260217 - L1MC4 LINE L1 -524 7518 7374 215 339 27 18 chr10 56557 56669 -140260096 + L2 LINE L2 2687 2799 -515 1150 165 148 8 chr10 57108 57351 -140259414 + AluJb SINE Alu 1 277 -35 302 203 130 0 chr10 57362 57431 -140259334 + LTR35 LTR ERV1 453 530 -88 441 169 26 0 chr10 57492 57569 -140259196 + LTR35 LTR ERV1 540 618 0 21 0 0 0 chr10 57615 57636 -140259129 + AT_rich Low_complexity Low_complexity 1 21 0 1479 45 0 0 chr10 57746 57922 -140258843 - L1PA3 LINE L1 -2 6153 5978 1781 133 10 20 chr10 58031 58333 -140258432 + AluSx SINE Alu 13 311 -1 1945 144 0 10 chr10 58491 58804 -140257961 + AluSx SINE Alu 1 310 -2 1768 107 50 7 chr10 58812 59092 -140257673 + AluSq SINE Alu 1 292 -21 1529 169 61 0 chr10 59106 59385 -140257380 + AluJo SINE Alu 1 296 -16 1842 146 3 34 chr10 59405 59728 -140257037 + AluSq SINE Alu 1 313 0 2038 101 3 14 chr10 59734 60031 -140256734 + AluSx SINE Alu 1 294 -18 1931 125 3 13 chr10 60033 60345 -140256420 + AluSg1 SINE Alu 1 309 0 432 127 0 13 chr10 60666 60745 -140256020 - AluJ/FRAM SINE Alu -3 309 232 2247 75 3 10 chr10 60821 61128 -140255637 + AluSp SINE Alu 1 305 -8 2190 90 0 0 chr10 61841 62131 -140254634 + AluSq SINE Alu 15 304 -9 394 82 0 0 chr10 62785 62834 -140253931 + Alu SINE Alu 15 63 -240 800 192 0 0 chr10 64302 64458 -140252307 + AluSg/x SINE Alu 146 301 -11 1680 177 0 10 chr10 64647 64958 -140251807 - AluJb SINE Alu -4 308 1 198 0 0 0 chr10 65077 65099 -140251666 + (T)n Simple_repeat Simple_repeat 1 22 0 188 200 67 0 chr10 65108 65153 -140251612 + MER5B DNA MER1_type 84 131 -47 6384 154 24 75 chr10 65176 67115 -140249650 - L1MA4A LINE L1 -7 6147 4373 2720 98 0 6 chr10 67115 67481 -140249284 + THE1B LTR MaLR 1 364 0 6384 154 24 75 chr10 67481 67863 -140248902 - L1MA4A LINE L1 -1781 4373 3973 288 330 17 0 chr10 69600 69718 -140247047 - L1MEc LINE L1 -6068 328 209 402 21 0 0 chr10 69719 69766 -140246999 + (TTA)n Simple_repeat Simple_repeat 2 48 0 1978 58 0 0 chr10 69775 70015 -140246750 - AluY SINE Alu -37 274 35 5520 42 0 0 chr10 70312 70987 -140245778 - L1P LINE L1 -2255 3891 3217 19034 70 11 0 chr10 70988 73434 -140243331 + L1P LINE L1 449 2921 -3225 485 205 197 0 chr10 74087 74204 -140242561 + MER82 DNA MER2_type 4 143 -510 1861 216 28 56 chr10 74648 75112 -140241653 + MER82 DNA MER2_type 200 650 -3 662 126 0 0 chr10 75293 75380 -140241385 - 5S rRNA rRNA -31 90 4 828 145 0 0 chr10 75806 75930 -140240835 + FLAM_C SINE Alu 1 124 -19 21 0 0 0 chr10 76185 76206 -140240559 + AT_rich Low_complexity Low_complexity 1 21 0 634 273 45 0 chr10 76475 76651 -140240114 + MER20 DNA MER1_type 7 190 -29 424 290 3 30 chr10 76790 77164 -140239601 + G-rich Low_complexity Low_complexity 1 363 0 * 511 251 17 33 chr10 77100 77370 -140239395 + GA-rich Low_complexity Low_complexity 1 265 0 444 164 0 0 chr10 77440 77507 -140239258 - AluJ/FLAM SINE Alu -240 72 6 770 146 0 49 chr10 77535 77679 -140239086 - FLAM_C SINE Alu 0 143 7 266 256 31 19 chr10 77712 77872 -140238893 + L1M4 LINE L1 4348 4509 -1637 1646 232 96 15 chr10 77911 78497 -140238268 + L1M4 LINE L1 4740 5372 -774 1795 156 3 0 chr10 78501 78789 -140237976 + AluSx SINE Alu 3 291 -21 296 242 110 11 chr10 78801 78886 -140237879 + MLT1D LTR MaLR 278 371 -134 349 230 80 35 chr10 78886 78999 -140237766 + LTR35 LTR ERV1 1 118 -500 327 253 11 11 chr10 79126 79217 -140237548 + LTR58 LTR ERV1 350 440 -239 468 254 51 0 chr10 79374 79492 -140237273 + LTR35 LTR ERV1 495 618 0 * 734 176 0 14 chr10 79492 79610 -140237155 + MLT1C LTR MaLR 280 467 0 747 50 0 0 chr10 81499 81599 -140235166 + (CA)n Simple_repeat Simple_repeat 2 101 0 202 179 54 0 chr10 83131 83187 -140233578 + (CATCC)n Simple_repeat Simple_repeat 4 62 0 246 264 0 0 chr10 84287 84393 -140232372 + (CA)n Simple_repeat Simple_repeat 1 106 0 205 211 0 22 chr10 84564 84654 -140232111 + (CA)n Simple_repeat Simple_repeat 1 88 0 331 246 57 74 chr10 86822 86944 -140229821 - MIR SINE MIR -62 200 81 1980 129 0 13 chr10 86958 87267 -140229498 - AluSx SINE Alu -7 305 1 234 148 113 0 chr10 88417 88473 -140228292 - MIR SINE MIR -61 147 91 373 172 21 86 chr10 88719 88812 -140227953 + AluSg/x SINE Alu 204 290 -10 184 312 75 65 chr10 88821 88914 -140227851 + MIR3 SINE MIR 113 206 -2 360 77 0 0 chr10 89435 89487 -140227278 + (CA)n Simple_repeat Simple_repeat 2 53 0 559 206 89 48 chr10 89914 90060 -140226705 - FAM SINE Alu -20 165 14 815 176 14 0 chr10 91043 91171 -140225594 + AluJb SINE Alu 2 134 -178 2050 139 0 0 chr10 91171 91473 -140225292 + AluSx SINE Alu 1 302 -10 815 176 14 0 chr10 91473 91486 -140225279 + AluJb SINE Alu 134 145 -167 4144 195 84 5 chr10 91488 92819 -140223946 - MER52A LTR ERV1 -2 1753 177 325 326 11 80 chr10 93492 93667 -140223098 + L1MC5 LINE L1 7769 7931 -30 444 37 0 0 chr10 93961 94015 -140222750 + (CA)n Simple_repeat Simple_repeat 2 55 0 1828 139 75 33 chr10 94823 95182 -140221583 - THE1C LTR MaLR -1 374 1 2199 92 3 22 chr10 95183 95500 -140221265 - THE1C-int LTR MaLR -1 1579 1269 283 100 0 83 chr10 95506 95566 -140221199 - L1PA10 LINE L1 -4 6164 6110 819 131 0 0 chr10 95576 95706 -140221059 - L1M2 LINE L1 -818 5473 5344 739 153 6 102 chr10 95705 95882 -140220883 + L1 LINE L1 3802 3961 -2185 * 456 196 140 0 chr10 96001 96108 -140220657 + L1 LINE L1 3975 4096 -2050 655 149 53 0 chr10 96108 96222 -140220543 - MSTB1 LTR MaLR 0 432 313 7497 126 8 68 chr10 96222 97647 -140219118 - THE1C-int LTR MaLR -299 1352 1 1684 145 99 34 chr10 97647 97999 -140218766 - THE1C LTR MaLR 0 375 1 1084 149 99 27 chr10 98270 98492 -140218273 + MER4B LTR ERV1 1 238 -372 10215 92 3 8 chr10 98494 98664 -140218101 - HERVL-A2 LTR ERVL -4306 1348 1179 2142 112 0 0 chr10 98664 98968 -140217797 - AluY SINE Alu -7 304 1 10215 92 3 8 chr10 98968 100152 -140216613 - HERVL-A2 LTR ERVL -4475 1179 1 2911 110 50 11 chr10 100152 100588 -140216177 - MLT2A2 LTR ERVL 0 453 1 2214 106 0 0 chr10 100755 101058 -140215707 - AluSx SINE Alu -9 303 1 23 78 0 0 chr10 101111 101162 -140215603 + AT_rich Low_complexity Low_complexity 1 51 0 1492 180 71 4 chr10 101166 101433 -140215332 + AluJb SINE Alu 4 288 -24 1310 194 110 68 chr10 101585 101940 -140214825 + MLT1A2 LTR MaLR 1 370 -4 239 316 61 10 chr10 102340 102438 -140214327 + MIR SINE MIR 82 184 -78 1797 150 83 107 chr10 102807 103057 -140213708 + MER4B LTR ERV1 3 239 -371 2331 82 0 7 chr10 103057 103361 -140213404 + AluY SINE Alu 10 311 0 1797 150 83 107 chr10 103361 103570 -140213195 + MER4B LTR ERV1 239 451 -159 2837 177 58 6 chr10 104006 104521 -140212244 - MER52A LTR ERV1 0 1755 1214 4907 192 76 14 chr10 104652 105913 -140210852 + L1MC1 LINE L1 570 1751 -4675 318 50 0 0 chr10 105913 105953 -140210812 + (TG)n Simple_repeat Simple_repeat 1 40 0 4907 192 76 14 chr10 105953 107120 -140209645 + L1MC1 LINE L1 1751 3246 -3180 4661 235 24 47 chr10 107116 107366 -140209399 + L1MC1 LINE L1 4164 4418 -2008 * 1840 184 16 27 chr10 107366 107735 -140209030 - MLT1A1 LTR MaLR 0 365 1 4661 235 24 47 chr10 107735 108967 -140207798 + L1MC1 LINE L1 4418 5612 -814 1221 183 48 28 chr10 108967 109219 -140207546 + AluJo SINE Alu 45 301 -11 4305 166 23 7 chr10 109222 109995 -140206770 + L1MC1 LINE L1 5595 6380 -233 1612 134 7 29 chr10 110499 110775 -140205990 + L1MC1 LINE L1 6056 6325 -8 2063 100 0 4 chr10 110804 111085 -140205680 + AluSq SINE Alu 30 309 -4 24 0 0 0 chr10 111236 111260 -140205505 + AT_rich Low_complexity Low_complexity 1 24 0 182 298 43 32 chr10 112294 112388 -140204377 - L2 LINE L2 -291 2981 2887 427 298 16 8 chr10 112546 112670 -140204095 + L2 LINE L2 3189 3313 0 1072 245 14 34 chr10 113236 113587 -140203178 - L1MEc LINE L1 -4286 2110 1767 23 54 0 0 chr10 114071 114108 -140202657 + AT_rich Low_complexity Low_complexity 1 37 0 2180 99 0 7 chr10 115896 116190 -140200575 - AluSg SINE Alu -18 292 1 1770 154 7 3 chr10 116831 117116 -140199649 + AluSx SINE Alu 5 290 -22 1523 231 111 55 chr10 118676 119655 -140197110 - L1MC5 LINE L1 -449 7512 6476 2219 110 7 3 chr10 121026 121334 -140195431 + AluSq SINE Alu 5 313 0 586 200 0 8 chr10 121496 121626 -140195139 - AluSg/x SINE Alu -7 302 174 398 316 172 5 chr10 122413 122628 -140194137 - MIR SINE MIR 0 262 12 327 260 102 16 chr10 122716 122843 -140193922 - MIR SINE MIR -65 197 60 500 288 112 0 chr10 123292 123462 -140193303 - MIR SINE MIR -66 196 8 311 313 51 28 chr10 124113 124547 -140192218 - L1M4 LINE L1 -748 5398 4955 233 261 52 96 chr10 124715 124830 -140191935 + L2 LINE L2 3197 3306 -7 193 288 51 0 chr10 124913 124972 -140191793 + MIR SINE MIR 64 125 -83 1762 202 93 134 chr10 124985 125305 -140191460 - L1ME1 LINE L1 -88 6078 5747 1654 149 4 39 chr10 125305 125586 -140191179 - AluJb SINE Alu -21 291 21 559 138 0 0 chr10 125586 125673 -140191092 - AluJ/FLAM SINE Alu -225 87 1 1762 202 93 134 chr10 125673 126125 -140190640 - L1ME1 LINE L1 -417 5749 5254 437 351 69 48 chr10 126149 126568 -140190197 + HAL1 LINE L1 1236 1663 -844 640 241 73 5 chr10 126750 126941 -140189824 + L1ME3A LINE L1 5746 5949 -221 535 143 9 9 chr10 130544 130656 -140186109 + CT-rich Low_complexity Low_complexity 2 113 0 246 253 118 51 chr10 130700 130766 -140185999 - L1ME LINE L1 -213 5908 5848 1431 193 39 18 chr10 130766 131051 -140185714 - AluJb SINE Alu -21 291 1 246 253 118 51 chr10 131051 131162 -140185603 - L1ME LINE L1 -273 5848 5719 1239 127 0 0 chr10 131185 131350 -140185415 - AluJ SINE Alu -14 298 134 235 237 0 0 chr10 131484 131522 -140185243 - FLAM_C SINE Alu 0 170 133 180 0 0 0 chr10 131524 131544 -140185221 + (TG)n Simple_repeat Simple_repeat 2 21 0 535 104 72 13 chr10 131547 131771 -140184994 + (TA)n Simple_repeat Simple_repeat 1 237 0 803 154 24 0 chr10 131771 131894 -140184871 - FLAM_C SINE Alu -6 127 2 314 298 130 19 chr10 131946 132154 -140184611 - L1ME LINE L1 -479 5642 5412 189 0 0 0 chr10 132904 132925 -140183840 + (CA)n Simple_repeat Simple_repeat 2 22 0 21 36 0 0 chr10 134374 134402 -140182363 + AT_rich Low_complexity Low_complexity 1 28 0 283 358 0 0 chr10 134432 134541 -140182224 + L1M4 LINE L1 4031 4139 -2007 366 293 37 16 chr10 134615 134803 -140181962 + L1M4 LINE L1 4334 4525 -1621 252 291 0 0 chr10 134841 134927 -140181838 + L1M4 LINE L1 4616 4701 -1445 296 331 37 25 chr10 135258 135421 -140181344 - L1MC/D LINE L1 -1983 5825 5661 348 246 129 75 chr10 135604 135884 -140180881 - L1 LINE L1 -1646 4500 4206 432 331 106 51 chr10 135973 136541 -140180224 - L1 LINE L1 -2139 4007 3409 1784 184 3 0 chr10 136727 137031 -140179734 + AluJb SINE Alu 1 305 -7 2278 91 0 0 chr10 137397 137684 -140179081 + AluSx SINE Alu 1 287 -25 21 0 0 0 chr10 138140 138161 -140178604 + AT_rich Low_complexity Low_complexity 1 21 0 6255 37 5 0 chr10 138161 138914 -140177851 - L1PA3 LINE L1 0 6155 5399 * 7906 31 5 0 chr10 138905 139866 -140176899 + L1PA3 LINE L1 4430 5395 -751 490 197 88 15 chr10 140139 140276 -140176489 - HAL1b LINE L1 -853 495 349 273 163 0 0 chr10 140322 140371 -140176394 + (TATATG)n Simple_repeat Simple_repeat 5 53 0 1767 123 12 108 chr10 142200 142533 -140174232 + AluJo SINE Alu 1 301 -11 445 311 41 18 chr10 143804 144012 -140172753 + MIR SINE MIR 3 209 -53 514 265 15 103 chr10 144439 144643 -140172122 + MER91B DNA MER1_type 4 189 -1 713 189 8 0 chr10 145645 145767 -140170998 + FLAM_A SINE Alu 1 123 -10 2025 149 0 0 chr10 146871 147173 -140169592 - AluJo SINE Alu -5 307 6 32 26 0 0 chr10 148180 148219 -140168546 + AT_rich Low_complexity Low_complexity 1 39 0 1727 146 79 7 chr10 148574 148854 -140167911 + AluSx SINE Alu 1 300 -12 757 296 71 0 chr10 148984 149224 -140167541 - MIR SINE MIR 0 262 6 2147 108 0 29 chr10 154355 154661 -140162104 - AluSx SINE Alu -15 297 1 180 125 0 0 chr10 154746 154778 -140161987 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 1556 191 16 3 chr10 156666 156969 -140159796 - AluJo SINE Alu -5 307 1 355 241 259 0 chr10 157215 157381 -140159384 + MER3 DNA MER1_type 1 209 0 322 157 0 0 chr10 157342 157393 -140159372 - MER3 DNA MER1_type -123 86 36 * 311 297 78 99 chr10 161439 161516 -140155249 + MER5A DNA MER1_type 2 79 -110 2359 99 0 0 chr10 161516 161819 -140154946 + AluSg SINE Alu 3 305 -5 311 297 78 99 chr10 161819 161933 -140154832 + MER5A DNA MER1_type 79 189 0 224 330 187 0 chr10 162165 162256 -140154509 - L2 LINE L2 -8 3305 3198 1341 198 53 14 chr10 162276 162559 -140154206 + MER58B DNA MER1_type 48 341 0 389 259 9 36 chr10 164409 164521 -140152244 + MER5B DNA MER1_type 15 123 -55 397 259 103 73 chr10 164533 164765 -140152000 - L1ME2 LINE L1 -10 6154 5916 288 0 0 0 chr10 166300 166332 -140150433 + (TG)n Simple_repeat Simple_repeat 1 32 0 229 70 23 93 chr10 166348 166391 -140150374 + L1MA8 LINE L1 6120 6159 -132 376 172 103 11 chr10 166393 166480 -140150285 + L1MA8 LINE L1 6191 6285 -6 * 437 266 87 17 chr10 166449 166690 -140150075 - L1MC4a LINE L1 -1341 6467 6210 1028 95 0 0 chr10 168682 168819 -140147946 + FLAM_C SINE Alu 1 137 -6 26 0 0 0 chr10 169592 169618 -140147147 + AT_rich Low_complexity Low_complexity 1 26 0 1846 152 10 3 chr10 169895 170191 -140146574 + AluJo SINE Alu 13 310 -2 2548 44 0 0 chr10 170290 170587 -140146178 + AluY SINE Alu 1 297 -14 30 0 0 0 chr10 171088 171118 -140145647 + AT_rich Low_complexity Low_complexity 1 30 0 1943 147 3 20 chr10 171242 171548 -140145217 + AluJb SINE Alu 1 301 -11 338 283 0 0 chr10 173802 173894 -140142871 + L1MC4 LINE L1 6610 6701 -1341 * 342 299 0 0 chr10 173827 173914 -140142851 - L1MC4 LINE L1 -1340 6702 6616 304 234 10 15 chr10 173923 174028 -140142737 + L1MC4 LINE L1 1995 6983 -1339 863 159 12 40 chr10 174032 174245 -140142520 - L1P4 LINE L1 -355 5801 5604 26 64 0 0 chr10 174281 174328 -140142437 + AT_rich Low_complexity Low_complexity 1 47 0 8205 84 5 7 chr10 175081 176199 -140140566 + L1P LINE L1 1655 2769 -3377 2448 62 0 13 chr10 176357 176661 -140140104 - AluY SINE Alu -11 300 1 23 54 0 0 chr10 176967 177004 -140139761 + AT_rich Low_complexity Low_complexity 1 37 0 180 0 0 0 chr10 178230 178250 -140138515 + (T)n Simple_repeat Simple_repeat 1 20 0 201 74 0 0 chr10 179941 179968 -140136797 + (TCC)n Simple_repeat Simple_repeat 1 27 0 807 11 0 0 chr10 184647 184737 -140132028 - 5S rRNA rRNA -31 90 1 229 299 143 0 chr10 186821 186898 -140129867 + L2 LINE L2 3160 3247 -25 1965 211 70 2 chr10 187008 187496 -140129269 + L1MA9 LINE L1 5792 6312 0 717 191 140 0 chr10 189637 189773 -140126992 - AluJb SINE Alu -11 301 147 186 43 0 0 chr10 190281 190304 -140126461 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1128 237 110 52 chr10 190314 190761 -140126004 + MLT1J LTR MaLR 1 473 -38 1565 207 7 10 chr10 191807 192102 -140124663 - AluJb SINE Alu -18 294 1 2634 40 0 0 chr10 194899 195200 -140121565 - AluY SINE Alu -10 301 1 22 0 0 0 chr10 195482 195504 -140121261 + AT_rich Low_complexity Low_complexity 1 22 0 2371 92 0 0 chr10 196769 197064 -140119701 + AluSc SINE Alu 2 296 -13 2168 119 0 7 chr10 197729 198023 -140118742 - AluJb SINE Alu -19 293 2 234 167 37 19 chr10 198244 198298 -140118467 - MER5A DNA MER1_type -122 67 13 364 228 20 30 chr10 199739 199840 -140116925 + MIR SINE MIR 162 261 -1 2264 90 0 0 chr10 200131 200419 -140116346 + AluY SINE Alu 1 288 -23 24 77 0 0 chr10 200721 200773 -140115992 + AT_rich Low_complexity Low_complexity 1 52 0 248 323 156 49 chr10 202127 202390 -140114375 + L2 LINE L2 2894 3184 -88 423 152 0 0 chr10 203060 203126 -140113639 - MADE1 DNA Mariner -14 66 1 528 240 14 4 chr10 206559 206768 -140109997 - MER65C LTR ERV1 -159 302 1 826 201 0 13 chr10 206827 206981 -140109784 + FRAM SINE Alu 1 152 -14 1391 201 47 0 chr10 209273 209552 -140107213 + AluJb SINE Alu 21 312 0 23 0 0 0 chr10 209643 209666 -140107099 + AT_rich Low_complexity Low_complexity 1 23 0 1226 133 55 62 chr10 209688 210030 -140106735 + L1MA5A LINE L1 5083 5427 -743 580 165 0 10 chr10 210043 210146 -140106619 - MER41B LTR ERV1 -88 547 446 1225 112 0 51 chr10 210146 210208 -140106557 + L1MA5A LINE L1 5413 5477 -820 2425 71 0 0 chr10 210208 210518 -140106247 + AluY SINE Alu 1 310 -1 1225 112 0 51 chr10 210518 210652 -140106113 + L1MA5A LINE L1 5477 5599 -698 796 115 0 18 chr10 210658 210771 -140105994 + AluSg SINE Alu 37 147 -163 3399 46 2 0 chr10 210771 211202 -140105563 - L1PA5 LINE L1 -748 5398 4967 6157 51 0 0 chr10 211202 211946 -140104819 + L1PA5 LINE L1 5410 6154 0 968 99 56 0 chr10 211946 212113 -140104652 + AluSg SINE Alu 134 308 0 294 29 0 0 chr10 212132 212167 -140104598 + (CA)n Simple_repeat Simple_repeat 1 35 0 3365 169 75 5 chr10 212168 212823 -140103942 + L1MA5A LINE L1 5596 6296 -1 1552 250 136 8 chr10 212824 213420 -140103345 - L1MC3 LINE L1 -3 7782 7111 895 238 117 67 chr10 213895 214357 -140102408 - L1MC4 LINE L1 -6 8036 7552 22 0 0 0 chr10 214368 214390 -140102375 + AT_rich Low_complexity Low_complexity 1 22 0 3486 186 49 47 chr10 214390 215415 -140101350 + L1MB3 LINE L1 4985 6028 -155 180 320 0 13 chr10 215896 215974 -140100791 - L2 LINE L2 -1279 2035 1959 378 328 143 0 chr10 217069 217258 -140099507 - MIR SINE MIR -16 246 31 1510 237 105 5 chr10 217418 217819 -140098946 - Tigger3b DNA MER2_type 0 1231 791 245 222 19 0 chr10 217915 217969 -140098796 - Tigger3b DNA MER2_type -386 845 791 * 270 178 0 0 chr10 217966 218011 -140098754 - Tigger3b DNA MER2_type -386 846 802 2822 193 97 50 chr10 218172 218396 -140098369 - Tigger3b DNA MER2_type -2184 844 632 2380 78 3 0 chr10 218396 218705 -140098060 - AluSp SINE Alu -3 310 1 2822 193 97 50 chr10 218705 219285 -140097480 - Tigger3b DNA MER2_type -2396 632 2 204 320 51 0 chr10 219408 219486 -140097279 + (CATG)n Simple_repeat Simple_repeat 1 82 0 376 255 27 20 chr10 219537 219686 -140097079 + (CA)n Simple_repeat Simple_repeat 1 150 0 319 320 11 22 chr10 220047 220225 -140096540 + (CA)n Simple_repeat Simple_repeat 1 176 0 1488 203 0 7 chr10 220530 220811 -140095954 - AluJo SINE Alu -20 292 14 29 0 0 0 chr10 220848 220877 -140095888 + AT_rich Low_complexity Low_complexity 1 29 0 1710 193 97 0 chr10 221751 222124 -140094641 + MSTB1 LTR MaLR 24 432 0 297 248 116 16 chr10 223758 223879 -140092886 - MER20 DNA MER1_type -60 159 27 1886 136 27 0 chr10 224431 224725 -140092040 - AluSx SINE Alu -10 302 1 1538 195 82 0 chr10 228282 228600 -140088165 - MER2 DNA MER2_type 0 344 1 831 208 72 22 chr10 229537 229804 -140086961 - MLT1A1 LTR MaLR -7 367 1 492 303 123 44 chr10 230010 230350 -140086415 - L1MCc LINE L1 -4410 2712 2346 644 287 82 51 chr10 230481 231114 -140085651 - L1MCc LINE L1 -4887 1536 1252 331 317 127 17 chr10 231583 231883 -140084882 - L1MCc LINE L1 -6074 349 17 22 0 0 0 chr10 231885 231907 -140084858 + AT_rich Low_complexity Low_complexity 1 22 0 320 284 23 0 chr10 232117 232205 -140084560 + MER58 DNA MER1_type 177 266 -2154 1941 133 0 29 chr10 233717 234026 -140082739 - AluSx SINE Alu -12 300 1 1851 110 0 4 chr10 235076 235339 -140081426 + AluSg SINE Alu 36 297 -13 843 152 0 14 chr10 235450 235595 -140081170 + FLAM_C SINE Alu 1 143 0 305 212 169 8 chr10 237441 237559 -140079206 + L1ME4a LINE L1 5985 6121 0 2040 121 0 0 chr10 238798 239103 -140077662 + AluY SINE Alu 1 305 -6 1820 131 12 44 chr10 239714 240034 -140076731 + AluJb SINE Alu 1 310 -2 679 195 0 17 chr10 241396 241514 -140075251 - FLAM_A SINE Alu -17 116 1 489 151 244 34 chr10 243859 243978 -140072787 + MER58A DNA MER1_type 46 189 -35 600 209 118 13 chr10 244536 244689 -140072076 - MER20 DNA MER1_type -9 210 42 568 252 167 9 chr10 244689 244899 -140071866 - L2 LINE L2 -1366 1948 1706 24 0 0 0 chr10 245507 245531 -140071234 + AT_rich Low_complexity Low_complexity 1 24 0 2066 93 3 23 chr10 248103 248404 -140068361 + AluSx SINE Alu 1 295 -17 190 380 120 9 chr10 248836 248944 -140067821 - MIR SINE MIR -141 121 2 380 159 439 8 chr10 249167 249299 -140067466 - MER5A DNA MER1_type 0 189 1 367 235 161 37 chr10 249525 249687 -140067078 - MER5A DNA MER1_type 0 189 8 854 197 175 11 chr10 249758 250027 -140066738 - MER33 DNA MER1_type 0 324 12 269 282 27 45 chr10 250609 250719 -140066046 - L2 LINE L2 -24 3289 3182 203 273 0 0 chr10 251440 251484 -140065281 + (TATG)n Simple_repeat Simple_repeat 4 47 0 742 186 0 0 chr10 251544 251668 -140065097 + FLAM_C SINE Alu 5 128 -5 3003 163 61 40 chr10 252292 252919 -140063846 - LTR49-int LTR ERV1 -3127 3204 2565 2404 82 0 25 chr10 252924 253243 -140063522 + AluY SINE Alu 1 311 0 2133 127 14 0 chr10 253271 253563 -140063202 - AluSg1 SINE Alu -13 296 1 1764 227 52 22 chr10 253563 254070 -140062695 - LTR49-int LTR ERV1 -3858 2473 1517 601 150 74 104 chr10 254144 254298 -140062467 - LTR49-int LTR ERV1 -2645 2235 2078 2062 113 46 0 chr10 254298 254580 -140062185 + AluSc SINE Alu 3 297 -12 601 150 74 104 chr10 254580 254671 -140062094 - LTR49-int LTR ERV1 -2802 2078 1501 250 146 0 36 chr10 254670 254725 -140062040 - LTR49-int LTR ERV1 -4996 1335 1283 * 254 268 42 0 chr10 254725 254796 -140061969 - tRNA-Glu-GAG tRNA tRNA 0 75 2 261 244 13 13 chr10 254818 254896 -140061869 - LTR49-int LTR ERV1 -5138 1193 1116 322 172 0 31 chr10 255022 255086 -140061679 - LTR49-int LTR ERV1 -3690 1181 1120 3244 134 10 4 chr10 255839 256333 -140060432 - LOR1a LTR ERV1 0 497 1 1330 157 19 83 chr10 256504 256637 -140060128 - LTR56 LTR ERV1 -1 444 304 2307 128 0 0 chr10 256637 256949 -140059816 - AluSx SINE Alu 0 312 1 1330 157 19 83 chr10 256949 257127 -140059638 - LTR56 LTR ERV1 -141 304 153 888 198 20 20 chr10 258068 258270 -140058495 - LTR56 LTR ERV1 -234 211 10 7473 37 6 7 chr10 258271 259491 -140057274 + L1PA5 LINE L1 4932 6151 -3 439 191 64 0 chr10 259502 259612 -140057153 - LTR37A LTR ERV1 -264 162 46 449 262 162 80 chr10 259698 260339 -140056426 + L1MC4a LINE L1 5326 6019 -1789 945 260 60 0 chr10 261718 261999 -140054766 + MER58B DNA MER1_type 34 331 -10 275 327 27 9 chr10 262661 262771 -140053994 - MER5A DNA MER1_type -74 115 4 2108 128 3 0 chr10 264832 265129 -140051636 + AluSc SINE Alu 1 298 -11 529 308 174 49 chr10 368608 369219 -139947546 + HAL1 LINE L1 1417 2103 -404 24 96 0 0 chr10 370491 370564 -139946201 + AT_rich Low_complexity Low_complexity 1 73 0 1214 115 6 22 chr10 371568 371751 -139945014 + AluSq SINE Alu 124 303 -10 257 250 15 15 chr10 372651 372719 -139944046 - MIR SINE MIR -114 148 81 319 296 30 24 chr10 373299 373468 -139943297 + (TCTA)n Simple_repeat Simple_repeat 3 172 0 284 318 34 0 chr10 373513 373601 -139943164 + L2 LINE L2 3182 3272 -41 208 403 86 0 chr10 373641 373827 -139942938 - L2 LINE L2 -457 2857 2656 2262 123 0 0 chr10 373885 374186 -139942579 + AluSx SINE Alu 1 301 -11 2125 108 3 48 chr10 374709 375023 -139941742 - AluSp SINE Alu -13 300 1 2727 87 0 3 chr10 375543 375923 -139940842 - L1PA7 LINE L1 -7 6147 5769 1877 85 60 0 chr10 375927 375959 -139940806 - L1P5 LINE L1 -334 5822 5793 16146 31 3 0 chr10 375959 378732 -139938033 - L1PA2 LINE L1 -2 6153 3372 1877 85 60 0 chr10 378732 379000 -139937765 - L1P5 LINE L1 -363 5793 5498 2059 144 3 7 chr10 379570 379875 -139936890 - AluSg SINE Alu -6 304 1 1810 150 28 0 chr10 384064 384350 -139932415 - AluJo SINE Alu -18 294 1 2561 68 10 0 chr10 387809 388117 -139928648 - AluY SINE Alu 0 311 1 193 279 15 29 chr10 388645 388713 -139928052 - MIR SINE MIR -118 144 78 246 67 133 0 chr10 392807 392852 -139923913 + Alu SINE Alu 238 288 -14 2750 209 39 46 chr10 394981 395697 -139921068 + L1MA9 LINE L1 5495 6205 -107 653 227 85 0 chr10 395842 396018 -139920747 + MER2 DNA MER2_type 1 191 -154 238 279 58 0 chr10 396241 396327 -139920438 + MER2 DNA MER2_type 101 191 -154 248 260 52 0 chr10 396639 396716 -139920049 + MER2 DNA MER2_type 101 181 -164 280 264 46 0 chr10 396880 396967 -139919798 + MER2 DNA MER2_type 101 191 -154 251 263 66 0 chr10 396960 397036 -139919729 + MER2 DNA MER2_type 101 181 -164 * 781 245 46 33 chr10 397039 397084 -139919681 + MER2 DNA MER2_type 101 144 -201 2198 103 0 3 chr10 397084 397366 -139919399 + AluY SINE Alu 1 281 -30 180 0 0 0 chr10 397368 397388 -139919377 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 781 245 46 33 chr10 397388 397580 -139919185 + MER2 DNA MER2_type 144 344 -1 1704 176 25 0 chr10 398123 398407 -139918358 - AluJb SINE Alu -21 291 1 942 167 12 153 chr10 399588 400037 -139916728 - THE1B LTR MaLR 0 364 1 180 217 87 0 chr10 400767 400813 -139915952 - L2 LINE L2 -2 3311 3262 314 314 34 17 chr10 401984 402102 -139914663 - L2 LINE L2 0 3313 3194 1770 180 18 7 chr10 402104 402388 -139914377 + AluJb SINE Alu 1 287 -25 464 299 61 30 chr10 402590 402754 -139914011 + L1M4 LINE L1 2921 3089 -3057 472 319 91 7 chr10 402769 403172 -139913593 + L1M4 LINE L1 4160 4607 -1539 226 235 99 0 chr10 403562 403643 -139913122 + L1M LINE L1 5301 5389 -970 231 36 0 0 chr10 405212 405240 -139911525 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 317 222 103 34 chr10 409544 409661 -139907104 - MIR SINE MIR -115 147 23 263 324 131 14 chr10 410374 410519 -139906246 - MIR SINE MIR -1 261 100 1632 158 9 85 chr10 412519 412848 -139903917 + AluJb SINE Alu 1 304 -8 2171 122 6 16 chr10 412875 413186 -139903579 + AluSq SINE Alu 1 308 -5 1967 159 3 7 chr10 415682 415991 -139900774 + AluSx SINE Alu 1 308 -4 348 117 39 0 chr10 416582 416659 -139900106 + G-rich Low_complexity Low_complexity 1 80 0 1070 206 81 12 chr10 418692 419012 -139897753 + MLT1A1 LTR MaLR 23 364 -1 184 266 47 0 chr10 421748 421812 -139894953 + MIR SINE MIR 45 111 -97 3886 242 67 1 chr10 422029 423084 -139893681 - L1MC1 LINE L1 -1 6332 5208 244 304 20 0 chr10 424684 424786 -139891979 + (TA)n Simple_repeat Simple_repeat 1 104 0 223 200 246 0 chr10 426098 426208 -139890557 - MER5A DNA MER1_type -18 171 35 230 289 60 0 chr10 428326 428409 -139888356 + MLT1J LTR MaLR 346 433 -78 743 173 7 14 chr10 430048 430187 -139886578 - AluJb SINE Alu -19 293 156 960 134 0 0 chr10 430802 430936 -139885829 + FLAM_C SINE Alu 6 139 -4 244 114 23 23 chr10 431001 431045 -139885720 + MER101B LTR ERV1 13 56 -514 642 273 84 8 chr10 431247 431485 -139885280 + LTR51 LTR ERV1 228 483 -188 369 316 0 0 chr10 432820 433057 -139883708 + GA-rich Low_complexity Low_complexity 1 237 0 699 166 0 64 chr10 433064 433281 -139883484 - AluJb SINE Alu -36 276 1 767 157 40 26 chr10 433801 434029 -139882736 + MER4A LTR ERV1 1 303 -361 363 140 10 194 chr10 434035 434166 -139882599 + MER4B LTR ERV1 517 610 0 2914 13 0 0 chr10 434927 435237 -139881528 - AluYb8 SINE Alu -8 310 1 816 262 112 29 chr10 436267 436652 -139880113 - MLT1C LTR MaLR -4 463 47 257 241 108 0 chr10 436784 436867 -139879898 - MLT1C LTR MaLR -366 101 10 1978 132 10 3 chr10 438055 438351 -139878414 - AluSx SINE Alu -14 298 1 1505 189 22 11 chr10 438429 438704 -139878061 - AluJo SINE Alu -22 290 13 1216 241 89 0 chr10 439523 439826 -139876939 - MER2 DNA MER2_type -14 331 2 567 212 196 6 chr10 440806 440985 -139875780 + L1MB3 LINE L1 5970 6182 -1 975 260 19 11 chr10 443987 444256 -139872509 - L1MB7 LINE L1 -19 6165 5895 2257 207 105 25 chr10 444459 445256 -139871509 - L1MB7 LINE L1 -274 5904 5020 987 210 75 68 chr10 445256 445399 -139871366 + MLT1B LTR MaLR 1 141 -249 2056 125 57 0 chr10 445399 445695 -139871070 - AluSq SINE Alu 0 313 1 987 210 75 68 chr10 445695 445936 -139870829 + MLT1B LTR MaLR 141 388 -2 2257 207 105 25 chr10 445936 446057 -139870708 - L1MB7 LINE L1 -1158 5020 4910 331 167 121 0 chr10 446161 446227 -139870538 - Charlie1 DNA MER1_type 0 2761 2688 2091 127 13 16 chr10 446234 446542 -139870223 + AluSx SINE Alu 1 307 -5 1347 292 155 4 chr10 446542 447278 -139869487 - Charlie1 DNA MER1_type -150 2611 1765 267 168 20 10 chr10 448684 448785 -139867980 + (CAGG)n Simple_repeat Simple_repeat 2 103 0 243 0 0 0 chr10 449151 449178 -139867587 + (A)n Simple_repeat Simple_repeat 1 27 0 416 280 40 40 chr10 449443 449618 -139867147 - MER106A DNA MER1_type -16 220 46 434 245 83 31 chr10 450210 450246 -139866519 - MER3 DNA MER1_type -1 208 175 2198 129 7 0 chr10 450246 450549 -139866216 - AluSx SINE Alu -7 305 1 434 245 83 31 chr10 450549 450704 -139866061 - MER3 DNA MER1_type -34 175 7 2349 83 3 0 chr10 452808 453096 -139863669 + AluY SINE Alu 1 289 -22 184 321 19 0 chr10 455911 455964 -139860801 + MER5A DNA MER1_type 67 120 -69 247 252 28 19 chr10 459117 459224 -139857541 + CT-rich Low_complexity Low_complexity 2 109 0 2234 164 108 24 chr10 459868 460427 -139856338 + MER4B LTR ERV1 1 903 0 2372 238 81 49 chr10 462624 463456 -139853309 + Cheshire DNA MER1_type 509 1366 -1054 459 248 153 0 chr10 463544 463681 -139853084 - L1MEc LINE L1 -6201 195 38 443 328 66 6 chr10 463725 463908 -139852857 + MIR SINE MIR 48 241 -21 251 284 31 102 chr10 466214 466341 -139850424 + MER5A DNA MER1_type 9 126 -52 1948 130 0 11 chr10 466347 466617 -139850148 - AluSg SINE Alu -7 303 37 1735 156 43 0 chr10 466811 467093 -139849672 - AluSx SINE Alu -18 294 1 2718 36 3 0 chr10 467649 467955 -139848810 + AluY SINE Alu 1 307 -4 266 234 52 0 chr10 468312 468389 -139848376 + MER58C DNA MER1_type 117 197 -18 232 323 83 0 chr10 469389 469485 -139847280 - MIR SINE MIR -58 204 101 378 242 24 24 chr10 470597 470721 -139846044 + CT-rich Low_complexity Low_complexity 4 127 0 1723 170 0 3 chr10 472578 472861 -139843904 - AluJb SINE Alu -25 287 6 1807 154 7 36 chr10 475783 476089 -139840676 + AluSx SINE Alu 1 297 -15 203 114 23 0 chr10 476948 476992 -139839773 + T-rich Low_complexity Low_complexity 3 47 0 266 254 10 83 chr10 477862 478055 -139838710 + (CATA)n Simple_repeat Simple_repeat 1 179 0 288 287 25 32 chr10 478347 478504 -139838261 + (CATA)n Simple_repeat Simple_repeat 3 158 0 266 297 22 33 chr10 478570 478752 -139838013 + (CATA)n Simple_repeat Simple_repeat 1 180 0 329 253 28 55 chr10 478862 479044 -139837721 + (CATA)n Simple_repeat Simple_repeat 3 179 0 * 355 251 40 29 chr10 478923 479098 -139837667 + (CATATA)n Simple_repeat Simple_repeat 4 180 0 346 264 22 50 chr10 479220 479402 -139837363 + (CATATA)n Simple_repeat Simple_repeat 3 179 0 246 325 24 30 chr10 479343 479509 -139837256 + (TATG)n Simple_repeat Simple_repeat 1 165 0 * 300 314 23 29 chr10 479521 479696 -139837069 + (CATATA)n Simple_repeat Simple_repeat 4 177 0 208 307 12 49 chr10 479665 479828 -139836937 + (CATA)n Simple_repeat Simple_repeat 1 157 0 * 1392 156 59 103 chr10 481028 481368 -139835397 - MER1B DNA MER1_type 0 339 15 1209 183 0 9 chr10 481542 481761 -139835004 + AluJo SINE Alu 89 305 -7 230 143 0 36 chr10 484814 484870 -139831895 - L1MA4 LINE L1 -295 6005 5952 235 321 36 0 chr10 486448 486532 -139830233 + MIR SINE MIR 86 172 -90 210 325 37 0 chr10 487262 487425 -139829340 + (CCCCAG)n Simple_repeat Simple_repeat 3 171 0 1079 296 83 33 chr10 487968 488761 -139828004 - L1ME LINE L1 -465 5699 4863 2261 101 0 10 chr10 490274 490580 -139826185 - AluSx SINE Alu -9 303 1 307 273 84 56 chr10 491560 491703 -139825062 + L1ME2 LINE L1 5731 5877 -289 270 111 44 0 chr10 492231 492276 -139824489 + Alu SINE Alu 1 47 -254 199 271 9 75 chr10 492648 492755 -139824010 + L2 LINE L2 2994 3093 -179 240 319 129 0 chr10 492926 493042 -139823723 + L2 LINE L2 3133 3263 -9 337 228 13 0 chr10 494466 494545 -139822220 - MER116 DNA Mariner 0 80 1 666 234 119 23 chr10 494775 494993 -139821772 + MER8 DNA MER2_type 1 239 0 2180 107 47 0 chr10 495383 495681 -139821084 + AluSq SINE Alu 2 313 0 667 284 147 29 chr10 496102 496552 -139820213 + MLT2B2 LTR ERVL 9 511 -4 224 267 0 0 chr10 497696 497756 -139819009 + C-rich Low_complexity Low_complexity 2 61 0 971 258 192 2 chr10 500858 501312 -139815453 - MER92B LTR ERV1 -96 540 1 769 232 135 12 chr10 501546 501805 -139814960 + MLT1A1 LTR MaLR 2 292 -73 958 110 0 7 chr10 502349 502485 -139814280 + AluSg/x SINE Alu 175 309 -1 272 164 119 0 chr10 502873 502952 -139813813 - MLT1D LTR MaLR 0 505 464 228 274 71 0 chr10 503033 503146 -139813619 + (CCCCAG)n Simple_repeat Simple_repeat 4 124 0 216 0 0 0 chr10 504979 505003 -139811762 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 746 146 132 6 chr10 506756 506961 -139809804 - MER61D LTR ERV1 -216 218 1 245 215 11 0 chr10 506973 507066 -139809699 + (TATAG)n Simple_repeat Simple_repeat 1 94 0 2115 122 3 3 chr10 508440 508752 -139808013 - AluSx SINE Alu 0 312 1 953 238 36 0 chr10 509815 510038 -139806727 - MER8 DNA MER2_type 0 239 9 351 310 0 26 chr10 516711 516824 -139799941 - HAL1b LINE L1 -863 485 376 2302 78 3 3 chr10 518379 518685 -139798080 - AluY SINE Alu -5 306 1 1934 107 7 52 chr10 518687 518996 -139797769 - AluSx SINE Alu -17 295 1 276 254 82 45 chr10 519546 519680 -139797085 + MER5A DNA MER1_type 51 189 0 1554 142 38 11 chr10 519871 520138 -139796627 - AluJo SINE Alu -6 306 33 431 345 0 0 chr10 521162 521339 -139795426 + C-rich Low_complexity Low_complexity 2 178 0 192 305 105 11 chr10 522105 522200 -139794565 + MIR SINE MIR 68 171 -91 1668 188 47 9 chr10 524240 524580 -139792185 + MLT1A1 LTR MaLR 13 365 0 294 236 0 42 chr10 524587 524659 -139792106 + MLT1A1 LTR MaLR 297 365 0 283 250 0 42 chr10 524666 524738 -139792027 + MLT1A1 LTR MaLR 297 365 0 291 307 24 8 chr10 525494 525621 -139791144 + L1MC4 LINE L1 7914 8042 0 1395 127 5 5 chr10 527136 527348 -139789417 - AluSq SINE Alu 0 313 102 29 28 0 0 chr10 530682 530718 -139786047 + AT_rich Low_complexity Low_complexity 1 36 0 234 343 0 0 chr10 531809 531882 -139784883 - MIR3 SINE MIR -12 196 124 240 167 179 12 chr10 533010 533094 -139783671 + MER20 DNA MER1_type 67 164 -55 594 234 60 43 chr10 533480 533664 -139783101 - LTR55 LTR ERV -361 187 1 266 316 105 7 chr10 533735 533887 -139782878 + MIR SINE MIR 51 217 -45 247 265 0 33 chr10 538176 538457 -139778308 + CT-rich Low_complexity Low_complexity 1 271 0 216 324 29 0 chr10 539040 539108 -139777657 + L2 LINE L2 3195 3264 -8 182 211 26 0 chr10 540156 540194 -139776571 - L3b LINE CR1 -123 1460 1422 187 354 152 15 chr10 540231 540429 -139776336 - L3b LINE CR1 -250 1333 1109 295 214 14 28 chr10 544211 544356 -139772409 + (TATG)n Simple_repeat Simple_repeat 4 146 0 394 273 48 12 chr10 544392 544557 -139772208 + (TATG)n Simple_repeat Simple_repeat 2 172 0 266 180 16 0 chr10 544590 544651 -139772114 + (TG)n Simple_repeat Simple_repeat 1 62 0 210 367 0 0 chr10 545200 545377 -139771388 + (CCCCAG)n Simple_repeat Simple_repeat 4 180 0 200 246 35 0 chr10 547218 547275 -139769490 + (AATAG)n Simple_repeat Simple_repeat 1 59 0 24607 92 22 3 chr10 547424 551322 -139765443 - L1P3 LINE L1 -673 5499 1527 298 325 62 19 chr10 552571 552780 -139763985 + Charlie1 DNA MER1_type 20 237 -2524 * 357 273 94 0 chr10 552766 552894 -139763871 + Charlie1 DNA MER1_type 2622 2761 0 1586 176 20 3 chr10 554064 554359 -139762406 + AluJo SINE Alu 1 300 -12 497 348 86 0 chr10 554506 554693 -139762072 + L1M4 LINE L1 2946 3148 -2998 551 252 32 13 chr10 554706 554861 -139761904 + L1MCa LINE L1 19 176 -6250 * 569 197 61 0 chr10 554859 554991 -139761774 + L1MCa LINE L1 988 1127 -5299 287 208 69 0 chr10 554978 555050 -139761715 + L1MCa LINE L1 1857 1933 -4493 * 242 296 82 10 chr10 555744 555842 -139760923 - MIR SINE MIR -65 197 93 387 216 0 34 chr10 559247 559335 -139757430 - Tigger5 DNA MER2_type -3 2320 2236 232 260 41 27 chr10 559393 559466 -139757299 - Tigger5 DNA MER2_type -2249 74 1 368 201 88 0 chr10 560276 560435 -139756330 + (CA)n Simple_repeat Simple_repeat 2 174 0 299 186 32 85 chr10 560346 560534 -139756231 + (CACAA)n Simple_repeat Simple_repeat 2 179 0 * 368 355 0 0 chr10 561933 562040 -139754725 + (CA)n Simple_repeat Simple_repeat 1 107 0 543 276 0 0 chr10 562065 562235 -139754530 + (CA)n Simple_repeat Simple_repeat 1 170 0 423 316 60 57 chr10 563008 563290 -139753475 - L1MC/D LINE L1 -2222 5586 5304 2095 120 11 0 chr10 564156 564440 -139752325 + AluSx SINE Alu 1 287 -25 751 325 21 23 chr10 564510 564894 -139751871 + L1MEc LINE L1 1627 2009 -4387 350 365 72 51 chr10 564958 565251 -139751514 + L1MDa LINE L1 51 349 -6191 343 244 194 49 chr10 565411 565735 -139751030 - L1M2 LINE L1 -5723 1126 756 24 0 0 0 chr10 566540 566564 -139750201 + AT_rich Low_complexity Low_complexity 1 24 0 2465 87 0 3 chr10 568718 569029 -139747736 + AluSq SINE Alu 1 310 -3 402 21 0 0 chr10 569029 569076 -139747689 + (TA)n Simple_repeat Simple_repeat 1 47 0 180 0 0 0 chr10 569520 569540 -139747225 + (TAA)n Simple_repeat Simple_repeat 2 21 0 2081 131 10 0 chr10 569549 569846 -139746919 + AluSx SINE Alu 3 302 -10 2292 99 0 7 chr10 574087 574379 -139742386 + AluSg SINE Alu 1 290 -20 303 28 0 0 chr10 574379 574415 -139742350 + (TA)n Simple_repeat Simple_repeat 2 37 0 2287 109 0 3 chr10 580622 580926 -139735839 - AluSx SINE Alu -9 303 1 264 54 0 27 chr10 580967 581004 -139735761 + U6 snRNA snRNA 1 36 -71 1355 219 61 48 chr10 581013 581080 -139735685 - MLT1C LTR MaLR 0 467 402 1409 174 77 43 chr10 581080 581379 -139735386 + AluJo SINE Alu 1 309 -3 1355 219 61 48 chr10 581379 581772 -139734993 - MLT1C LTR MaLR -65 402 1 234 247 26 13 chr10 582558 582712 -139734053 + (TG)n Simple_repeat Simple_repeat 1 156 0 317 269 150 57 chr10 582932 583125 -139733640 + HAL1 LINE L1 1912 2122 -385 413 248 113 28 chr10 583133 583274 -139733491 - L1ME LINE L1 -4142 2254 2102 1264 292 112 45 chr10 583289 584339 -139732426 - L1ME LINE L1 -4452 1944 765 4210 126 31 19 chr10 584339 584508 -139732257 - L1MA3 LINE L1 0 6305 6140 2297 103 3 3 chr10 584508 584808 -139731957 - AluSq SINE Alu -9 304 5 4210 126 31 19 chr10 584808 585368 -139731397 - L1MA3 LINE L1 -165 6140 5567 1264 292 112 45 chr10 585368 585475 -139731290 - L1ME LINE L1 -5631 765 667 316 309 78 78 chr10 585812 586042 -139730723 - L1ME LINE L1 -5992 404 175 2115 155 0 0 chr10 586077 586387 -139730378 - AluSg SINE Alu 0 310 1 429 210 89 85 chr10 586591 586852 -139729913 + HAL1 LINE L1 1860 2243 -264 972 121 0 0 chr10 586852 586984 -139729781 + FLAM_C SINE Alu 1 132 -1 429 210 89 85 chr10 586984 587088 -139729677 + HAL1 LINE L1 2243 2345 -162 2565 84 0 0 chr10 587091 587402 -139729363 + AluY SINE Alu 1 311 0 303 254 25 82 chr10 587695 587817 -139728948 - L1ME3 LINE L1 -83 6062 5948 394 215 91 59 chr10 587865 588099 -139728666 - L1ME2 LINE L1 -214 5939 5682 705 268 59 74 chr10 588218 588878 -139727887 - L1ME2 LINE L1 -1317 4812 4163 3506 226 121 15 chr10 588881 589905 -139726860 - MSTD-int LTR MaLR -601 1134 2 641 114 5 0 chr10 589915 590019 -139726746 - ALR/Alpha Satellite centromeric -20 151 47 1571 149 221 0 chr10 590019 590327 -139726438 - MSTD LTR MaLR -20 376 1 224 196 0 39 chr10 590529 590580 -139726185 + A-rich Low_complexity Low_complexity 2 50 0 1262 283 78 60 chr10 590777 591060 -139725705 - L1ME2 LINE L1 -2406 3723 3447 929 73 0 22 chr10 591060 591196 -139725569 - L1PA4 LINE L1 0 6155 6023 1262 283 78 60 chr10 591196 592313 -139724452 - L1ME2 LINE L1 -2682 3447 2297 471 268 63 123 chr10 592326 592471 -139724294 - L1ME2 LINE L1 -5073 1046 894 1579 186 0 11 chr10 592471 592735 -139724030 - AluJo SINE Alu -51 261 1 471 268 63 123 chr10 592735 592940 -139723825 - L1ME2 LINE L1 -5225 894 717 306 295 72 66 chr10 593125 593291 -139723474 - L1ME2 LINE L1 -5508 611 445 1389 159 4 35 chr10 593669 593816 -139722949 + AluJb SINE Alu 1 140 -172 2563 100 22 14 chr10 593816 594177 -139722588 + THE1B LTR MaLR 1 364 0 1389 159 4 35 chr10 594177 594261 -139722504 + AluJb SINE Alu 140 225 -87 232 254 0 0 chr10 594261 594320 -139722445 + AluSg/x SINE Alu 178 236 -66 647 200 0 33 chr10 594354 594474 -139722291 + AluSg/x SINE Alu 173 288 -21 286 263 106 73 chr10 594832 595011 -139721754 - MIR3 SINE MIR -1 207 23 330 325 132 15 chr10 595461 595658 -139721107 - L1ME3A LINE L1 -28 6142 5923 906 127 0 0 chr10 595747 595873 -139720892 - FLAM_C SINE Alu -17 126 1 1075 294 54 43 chr10 595881 596740 -139720025 - L1ME3A LINE L1 -264 5906 5032 539 272 83 74 chr10 596788 597355 -139719410 + L1ME LINE L1 24 595 -5475 449 364 79 38 chr10 597504 597564 -139719201 - L1ME3A LINE L1 -1123 5023 4967 2109 123 13 7 chr10 597564 597874 -139718891 - AluSx SINE Alu 0 312 1 449 364 79 38 chr10 597874 598258 -139718507 - L1ME3A LINE L1 -1179 4967 4561 1402 307 74 33 chr10 598323 598474 -139718291 - L1ME3A LINE L1 -1611 4535 4392 2156 124 0 0 chr10 598474 598765 -139718000 - AluSc SINE Alu -18 291 1 1402 307 74 33 chr10 598765 599544 -139717221 - L1ME3A LINE L1 -1754 4392 3567 2155 109 0 0 chr10 601407 601682 -139715083 + AluSx SINE Alu 1 275 -37 180 0 0 0 chr10 601685 601705 -139715060 + (TAA)n Simple_repeat Simple_repeat 2 21 0 186 196 59 0 chr10 602956 603007 -139713758 + L2 LINE L2 3255 3308 -5 23 0 0 0 chr10 603192 603215 -139713550 + AT_rich Low_complexity Low_complexity 1 23 0 458 239 43 0 chr10 603482 603599 -139713166 + L1 LINE L1 5113 5234 -912 * 2763 23 0 0 chr10 603599 603900 -139712865 - AluY SINE Alu -10 301 1 763 185 53 21 chr10 603900 604079 -139712686 + L1MA9 LINE L1 6125 6312 0 311 315 19 9 chr10 604248 604356 -139712409 - L1ME LINE L1 -382 5739 5631 403 321 46 8 chr10 605063 605194 -139711571 - L2 LINE L2 -1 3271 3136 333 283 20 30 chr10 606263 606362 -139710403 - L2 LINE L2 -1 3271 3174 1999 104 11 11 chr10 606631 606761 -139710004 + AluSq SINE Alu 4 281 -32 2168 137 12 41 chr10 606761 607213 -139709552 + AluSp SINE Alu 1 309 -4 194 0 39 0 chr10 607213 607239 -139709526 + (TAAAA)n Simple_repeat Simple_repeat 5 31 0 240 345 0 47 chr10 608554 608725 -139708040 + (CCCA)n Simple_repeat Simple_repeat 3 165 0 360 307 0 45 chr10 608740 608916 -139707849 + (CCCA)n Simple_repeat Simple_repeat 3 170 0 2010 138 6 3 chr10 610073 610384 -139706381 + AluSx SINE Alu 1 312 0 372 295 35 0 chr10 610786 610959 -139705806 + (CCCTG)n Simple_repeat Simple_repeat 2 180 0 382 278 35 0 chr10 611045 611218 -139705547 + (CCCTG)n Simple_repeat Simple_repeat 2 180 0 232 347 13 0 chr10 611278 611353 -139705412 - MER91B DNA MER1_type -60 130 55 2406 75 0 0 chr10 612094 612399 -139704366 - AluSc SINE Alu -4 305 1 1801 195 7 0 chr10 613381 613688 -139703077 + AluJo SINE Alu 1 309 -3 2136 88 15 0 chr10 613809 614176 -139702589 - AluSx SINE Alu 0 375 5 262 241 37 0 chr10 614332 614386 -139702379 + MER5A DNA MER1_type 109 164 -25 230 257 40 0 chr10 616091 616165 -139700600 + LTR16C LTR ERVL 408 484 -7 729 224 52 5 chr10 619024 619216 -139697549 + L1MB3 LINE L1 5470 5670 -501 1618 184 14 20 chr10 619216 619367 -139697398 - AluJo SINE Alu -16 296 146 2733 95 16 0 chr10 619367 619736 -139697029 + THE1C LTR MaLR 1 375 0 1618 184 14 20 chr10 619736 619877 -139696888 - AluJo SINE Alu -166 146 6 1715 211 136 0 chr10 619877 620332 -139696433 + L1MB3 LINE L1 5657 6173 -10 884 181 6 6 chr10 623947 624107 -139692658 - AluJb SINE Alu -22 290 131 326 300 154 11 chr10 624692 624952 -139691813 + MLT1A2 LTR MaLR 26 322 -52 2424 75 0 3 chr10 625211 625518 -139691247 - AluSx SINE Alu -4 308 3 1231 144 229 0 chr10 628171 628407 -139688358 + AluJo SINE Alu 1 290 -22 322 317 0 0 chr10 629246 629639 -139687126 + (TG)n Simple_repeat Simple_repeat 1 393 0 1113 166 0 10 chr10 630183 630376 -139686389 + AluJb SINE Alu 116 306 -6 307 222 218 56 chr10 631052 631286 -139685479 + L1M4 LINE L1 4297 4568 -1578 463 264 88 0 chr10 631925 632073 -139684692 + L1M4 LINE L1 4552 4712 -1434 6084 138 36 12 chr10 632074 632761 -139684004 + L1P4 LINE L1 1190 1916 -4933 2121 181 89 26 chr10 632761 633220 -139683545 + LTR2B LTR ERV1 3 490 0 6084 138 36 12 chr10 633220 633659 -139683106 + L1P4 LINE L1 1916 2343 -4506 2574 116 6 3 chr10 633660 634023 -139682742 + THE1B LTR MaLR 1 364 0 4692 106 83 60 chr10 634023 634938 -139681827 + THE1B-int LTR MaLR 1 936 -644 3902 122 47 56 chr10 634907 635614 -139681151 - THE1B-int LTR MaLR -833 747 46 * 2061 120 3 20 chr10 635614 635915 -139680850 - AluSq SINE Alu -17 296 1 3902 122 47 56 chr10 635915 635960 -139680805 - THE1B-int LTR MaLR -1534 46 2 2516 107 19 25 chr10 635961 636326 -139680439 - THE1B LTR MaLR 0 364 2 4836 241 106 8 chr10 636334 636391 -139680374 + L1P4 LINE L1 2348 2398 -4451 405 0 0 0 chr10 636391 636436 -139680329 + (CA)n Simple_repeat Simple_repeat 2 46 0 4836 241 106 8 chr10 636436 638217 -139678548 + L1P4 LINE L1 2398 4371 -2478 3716 160 28 58 chr10 638216 638430 -139678335 + L1P4 LINE L1 5036 5255 -1614 * 2273 82 0 16 chr10 638430 638735 -139678030 - AluY SINE Alu -10 301 2 3716 160 28 58 chr10 638735 639698 -139677067 + L1P4 LINE L1 5255 6163 -706 1779 175 0 7 chr10 639698 639990 -139676775 - AluJo SINE Alu -22 290 1 3716 160 28 58 chr10 639990 640079 -139676686 + L1P4 LINE L1 6163 6253 -616 235 227 82 27 chr10 640446 640556 -139676209 + Charlie5 DNA MER1_type 2402 2517 -95 237 263 53 0 chr10 641702 641778 -139674987 + MER116 DNA Mariner 1 80 0 184 227 23 0 chr10 642394 642438 -139674327 + L2 LINE L2 1877 1921 -1393 228 252 151 58 chr10 643877 644016 -139672749 + MLT1L LTR MaLR 41 192 -423 421 314 76 22 chr10 644546 644833 -139671932 + L1MEc LINE L1 2219 2525 -3690 335 321 28 0 chr10 645926 646032 -139670733 - L2 LINE L2 -10 3262 3154 347 380 20 64 chr10 646102 646352 -139670413 + L1M4 LINE L1 4777 5015 -1131 474 189 0 0 chr10 646677 646788 -139669977 + GA-rich Low_complexity Low_complexity 3 113 0 312 277 127 11 chr10 647591 647858 -139668907 + L1M4 LINE L1 5062 5359 -787 21 0 0 0 chr10 648308 648329 -139668436 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr10 650589 650629 -139666136 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr10 651789 651812 -139664953 + GC_rich Low_complexity Low_complexity 1 23 0 2104 114 0 7 chr10 652599 652898 -139663867 - AluSc SINE Alu -12 297 1 191 59 0 29 chr10 652902 652936 -139663829 + (TTA)n Simple_repeat Simple_repeat 1 33 0 311 286 36 19 chr10 654334 654484 -139662281 - MIR SINE MIR -36 172 17 2140 119 0 0 chr10 654744 655037 -139661728 + AluSx SINE Alu 1 293 -19 195 374 24 0 chr10 656417 656500 -139660265 + MIR SINE MIR 178 262 0 24 0 0 0 chr10 657258 657282 -139659483 + AT_rich Low_complexity Low_complexity 1 24 0 493 293 55 6 chr10 660533 660697 -139656068 + ERVL LTR ERVL 3223 3394 -2370 291 288 159 6 chr10 662244 662414 -139654351 + LTR50 LTR ERVL 14 209 -586 1757 183 0 0 chr10 663007 663322 -139653443 + AluJo SINE Alu 1 315 0 26 0 0 0 chr10 663798 663824 -139652941 + AT_rich Low_complexity Low_complexity 1 26 0 2355 71 0 7 chr10 665789 666086 -139650679 + AluY SINE Alu 1 295 -16 189 0 0 0 chr10 670073 670094 -139646671 + (T)n Simple_repeat Simple_repeat 1 21 0 348 247 113 20 chr10 670124 670274 -139646491 + L1ME1 LINE L1 36 199 -6197 1624 208 124 47 chr10 670346 670828 -139645937 + L1ME1 LINE L1 469 1007 -5389 2623 58 0 0 chr10 670828 671139 -139645626 - AluY SINE Alu 0 311 1 1624 208 124 47 chr10 671139 671253 -139645512 + L1ME1 LINE L1 1007 1111 -5285 1292 242 138 23 chr10 671335 671848 -139644917 + L1ME1 LINE L1 1408 1979 -4417 1386 104 0 45 chr10 671942 672164 -139644601 + MER30 DNA MER1_type 2 213 -17 1260 198 87 43 chr10 672174 672406 -139644359 + L1ME1 LINE L1 2057 2277 -4119 2295 105 3 0 chr10 672406 672710 -139644055 + AluSc SINE Alu 1 305 -4 1260 198 87 43 chr10 672710 672916 -139643849 + L1ME1 LINE L1 2277 2514 -3882 386 22 0 0 chr10 673665 673711 -139643054 + AluSg SINE Alu 1 46 -256 1132 79 0 0 chr10 673711 673851 -139642914 + AluSg/x SINE Alu 158 297 -15 1895 108 0 0 chr10 674495 674745 -139642020 + AluSg SINE Alu 47 296 -14 28 61 0 0 chr10 674915 674964 -139641801 + AT_rich Low_complexity Low_complexity 1 49 0 415 292 60 0 chr10 675848 676016 -139640749 + L1ME1 LINE L1 3337 3514 -2701 947 292 73 10 chr10 676055 676463 -139640302 + L1ME1 LINE L1 4492 4925 -1290 704 258 55 19 chr10 676509 676780 -139639985 + L1ME1 LINE L1 5026 5306 -909 6119 181 34 6 chr10 676831 678232 -139638533 + L1MC1 LINE L1 4885 6328 -5 2217 233 110 31 chr10 678243 679053 -139637712 + L1ME1 LINE L1 5355 6228 -7 24 32 0 0 chr10 679260 679291 -139637474 + AT_rich Low_complexity Low_complexity 1 31 0 1939 152 3 7 chr10 679665 679961 -139636804 + AluSx SINE Alu 1 295 -17 2087 132 3 3 chr10 680995 681291 -139635474 - AluSc SINE Alu -13 296 1 2360 103 0 0 chr10 682212 682514 -139634251 + AluSq SINE Alu 1 302 -11 331 303 114 56 chr10 684975 685388 -139631377 - L2 LINE L2 -9 3263 2827 290 319 184 23 chr10 685598 685902 -139630863 - L2 LINE L2 -1155 2159 1807 604 308 81 39 chr10 686166 686313 -139630452 + L1MC1 LINE L1 40 179 -6217 2317 80 0 39 chr10 686313 686624 -139630141 - AluSg SINE Alu -11 299 1 604 308 81 39 chr10 686624 686995 -139629770 + L1MC1 LINE L1 179 580 -5816 1634 255 103 7 chr10 686997 687581 -139629184 + L1MC1 LINE L1 607 1246 -5150 549 332 40 12 chr10 687618 687940 -139628825 + L1MC1 LINE L1 1760 2090 -4306 1456 175 183 99 chr10 688012 688380 -139628385 + L1MD3 LINE L1 6701 7036 -959 255 253 0 13 chr10 688380 688455 -139628310 + MLT1F1 LTR MaLR 52 125 -442 1456 175 183 99 chr10 688455 688978 -139627787 + L1MD3 LINE L1 7036 7983 -12 6053 254 108 29 chr10 688982 689976 -139626789 + L1MC1 LINE L1 2179 3094 -3121 2228 114 0 0 chr10 689976 690275 -139626490 - AluSx SINE Alu -9 303 5 6053 254 108 29 chr10 690275 690582 -139626183 + L1MC1 LINE L1 3094 3376 -2839 1752 164 4 4 chr10 690582 690857 -139625908 + AluJb SINE Alu 5 279 -33 6053 254 108 29 chr10 690857 691991 -139624774 + L1MC1 LINE L1 3376 4853 -1362 13341 144 49 15 chr10 691991 692197 -139624568 - Tigger1 DNA MER2_type 0 2418 2220 2016 158 0 0 chr10 692197 692500 -139624265 + AluSx SINE Alu 1 303 -9 13341 144 49 15 chr10 692500 694629 -139622136 - Tigger1 DNA MER2_type -198 2220 4 6053 254 108 29 chr10 694629 694916 -139621849 + L1MC1 LINE L1 4853 5116 -1099 345 239 147 0 chr10 695032 695141 -139621624 + L1MC1 LINE L1 5323 5447 -2407 4869 194 49 12 chr10 695151 696203 -139620562 + L1MCa LINE L1 30 1120 -5306 338 85 0 0 chr10 696221 696268 -139620497 + MER39B LTR ERV1 1 47 -606 1175 133 133 18 chr10 696280 696506 -139620259 + LTR49-int LTR ERV1 375 626 -5705 * 1519 167 141 95 chr10 696504 696988 -139619777 + LTR49-int LTR ERV1 751 1256 -5075 2124 216 62 4 chr10 696990 697665 -139619100 + L1M3 LINE L1 4788 5491 -692 987 118 0 0 chr10 697665 697800 -139618965 + AluSq/x SINE Alu 1 135 -177 2059 118 28 0 chr10 697800 698087 -139618678 + AluSg SINE Alu 1 295 -15 935 141 0 25 chr10 698088 698251 -139618514 + L1M3 LINE L1 5483 5641 -542 4660 152 6 17 chr10 698251 699020 -139617745 + L1MC1 LINE L1 5632 6402 0 1655 234 58 29 chr10 699021 699537 -139617228 + L1ME2 LINE L1 5390 5920 -244 238 200 83 0 chr10 699537 699597 -139617168 + FRAM/FAM SINE Alu 15 79 -87 2385 82 0 0 chr10 699670 699964 -139616801 + AluY SINE Alu 1 294 -17 225 0 0 0 chr10 701052 701077 -139615688 + (A)n Simple_repeat Simple_repeat 1 25 0 2032 97 8 0 chr10 701313 701580 -139615185 + AluY SINE Alu 40 308 -3 2463 43 3 23 chr10 702022 702324 -139614441 - AluY SINE Alu -15 296 1 21 0 0 0 chr10 702472 702493 -139614272 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 703213 703234 -139613531 + AT_rich Low_complexity Low_complexity 1 21 0 2235 103 7 0 chr10 703467 703769 -139612996 + AluSx SINE Alu 1 304 -8 264 281 94 41 chr10 704175 704346 -139612419 + L2 LINE L2 2723 2902 -412 21 36 0 0 chr10 705814 705842 -139610923 + AT_rich Low_complexity Low_complexity 1 28 0 309 295 116 0 chr10 706042 706171 -139610594 - MIR SINE MIR -27 235 92 2270 123 0 3 chr10 706374 706682 -139610083 + AluSx SINE Alu 1 307 -5 21 0 0 0 chr10 707172 707193 -139609572 + AT_rich Low_complexity Low_complexity 1 21 0 1805 116 27 62 chr10 708401 708700 -139608065 + AluSx SINE Alu 1 288 -24 424 0 0 0 chr10 708700 708747 -139608018 + (TAA)n Simple_repeat Simple_repeat 2 180 0 180 339 18 18 chr10 709271 709327 -139607438 + L3 LINE CR1 570 625 -952 258 326 11 0 chr10 712591 712683 -139604082 + L1MC4 LINE L1 7826 7918 -124 2029 98 0 11 chr10 712745 713055 -139603710 + AluSx SINE Alu 1 307 0 281 229 96 108 chr10 713654 713820 -139602945 - MIR SINE MIR 0 262 99 570 262 66 33 chr10 713959 714142 -139602623 + MIR SINE MIR 10 198 -64 182 209 68 122 chr10 714134 714282 -139602483 + L2 LINE L2 2764 2903 -411 * 675 180 34 4 chr10 714332 714481 -139602284 - MSTC LTR MaLR -9 419 271 674 186 6 51 chr10 714488 714644 -139602121 - MSTC LTR MaLR -247 149 1 3744 211 48 60 chr10 714655 714899 -139601866 - MSTC-int LTR MaLR -13 1722 1476 2065 112 10 7 chr10 714899 715204 -139601561 + AluSp SINE Alu 1 306 -7 3744 211 48 60 chr10 715204 715983 -139600782 - MSTC-int LTR MaLR -259 1476 712 989 186 0 0 chr10 716030 716191 -139600574 + FRAM SINE Alu 1 161 -5 807 164 21 21 chr10 716300 716440 -139600325 + MIR SINE MIR 22 161 -101 634 249 202 27 chr10 716565 717150 -139599615 - L2 LINE L2 -15 3298 2601 353 276 19 0 chr10 717344 717449 -139599316 + L1ME3A LINE L1 6048 6154 -16 1515 144 114 4 chr10 718292 718563 -139598202 - AluJo SINE Alu -1 301 1 2414 73 0 0 chr10 718568 718869 -139597896 - AluSq SINE Alu -12 301 1 732 183 0 7 chr10 719576 719713 -139597052 + AluSg/x SINE Alu 177 312 0 282 162 108 77 chr10 720106 720238 -139596527 - MLT1D LTR MaLR 0 505 464 377 262 49 12 chr10 720266 720430 -139596335 + (CCCCAG)n Simple_repeat Simple_repeat 4 173 0 548 234 36 12 chr10 720436 720603 -139596162 - MLT1D LTR MaLR -263 242 72 406 216 0 34 chr10 723906 723994 -139592771 - Tigger5 DNA MER2_type -3 2320 2236 249 260 41 27 chr10 724052 724125 -139592640 - Tigger5 DNA MER2_type -2249 74 1 390 165 15 8 chr10 724489 724622 -139592143 + (CA)n Simple_repeat Simple_repeat 2 135 0 1664 246 90 11 chr10 725915 726481 -139590284 + L1MA4 LINE L1 5690 6300 0 692 112 9 0 chr10 726535 726642 -139590123 + MSTA LTR MaLR 2 109 -319 370 70 18 0 chr10 726646 726703 -139590062 + MSTA LTR MaLR 52 109 -319 370 70 18 0 chr10 726707 726764 -139590001 + MSTA LTR MaLR 52 109 -319 370 103 20 13 chr10 726755 726832 -139589933 + MSTA LTR MaLR 45 119 -256 302 123 18 0 chr10 726829 726886 -139589879 + MSTA LTR MaLR 52 109 -319 * 325 98 0 0 chr10 726890 726941 -139589824 + MSTA LTR MaLR 52 102 -326 1682 138 163 9 chr10 726943 727268 -139589497 + MSTA LTR MaLR 45 419 -9 1934 105 17 3 chr10 727905 728199 -139588566 + AluSx SINE Alu 1 298 -14 204 135 27 0 chr10 731501 731538 -139585227 + (CA)n Simple_repeat Simple_repeat 1 38 0 226 273 201 19 chr10 733161 733315 -139583450 + MIR SINE MIR 6 187 -75 775 237 103 9 chr10 735118 735342 -139581423 - MLT1D LTR MaLR -5 500 256 645 137 20 26 chr10 738151 738304 -139578461 + GA-rich Low_complexity Low_complexity 1 152 0 1289 277 58 16 chr10 739212 739803 -139576962 + L1ME LINE L1 2112 2762 -3890 690 155 66 94 chr10 739903 740084 -139576681 + MLT2B2 LTR ERVL 340 515 0 1778 165 42 22 chr10 740086 740443 -139576322 + L1MB3 LINE L1 5813 6176 -7 26 0 0 0 chr10 740443 740469 -139576296 + AT_rich Low_complexity Low_complexity 1 26 0 413 301 98 33 chr10 740744 741080 -139575685 + L1ME LINE L1 4448 4805 -1735 * 2187 136 21 38 chr10 741063 741251 -139575514 + L1MA7 LINE L1 5175 5365 -926 2049 129 7 0 chr10 741251 741545 -139575220 + AluSx SINE Alu 1 296 -16 2187 136 21 38 chr10 741545 741833 -139574932 + L1MA7 LINE L1 5365 5648 -643 459 228 0 0 chr10 741880 741959 -139574806 - Tigger5 DNA MER2_type -2244 79 1 3513 167 9 36 chr10 741964 742623 -139574142 + L1MA7 LINE L1 5650 6290 -1 1346 199 21 28 chr10 742636 742923 -139573842 + AluJo SINE Alu 3 287 -25 34 72 0 0 chr10 743141 743210 -139573555 + AT_rich Low_complexity Low_complexity 1 69 0 480 314 54 4 chr10 743351 743612 -139573153 + L1ME LINE L1 4814 5087 -1453 301 196 137 20 chr10 744232 744334 -139572431 + L1ME LINE L1 5142 5255 -1285 2419 74 0 0 chr10 744439 744750 -139572015 + AluY SINE Alu 1 311 0 21 0 0 0 chr10 745583 745604 -139571161 + AT_rich Low_complexity Low_complexity 1 21 0 15534 175 44 18 chr10 745615 750331 -139566434 + L1M1 LINE L1 3 4933 -2072 2142 116 0 0 chr10 750331 750624 -139566141 + AluSx SINE Alu 1 293 -19 15534 175 44 18 chr10 750624 752018 -139564747 + L1M1 LINE L1 4933 6289 -716 2684 137 43 2 chr10 752014 752299 -139564466 + L1MA4A LINE L1 5494 5805 -498 * 285 29 0 0 chr10 752299 752333 -139564432 + (CA)n Simple_repeat Simple_repeat 2 35 0 2684 137 43 2 chr10 752333 752493 -139564272 + L1MA4A LINE L1 5805 5957 -346 737 168 74 62 chr10 752498 752711 -139564054 + L1MA4A LINE L1 6037 6239 -52 354 145 0 0 chr10 753523 753592 -139563173 + L1MA4A LINE L1 6230 6298 -5 293 233 128 8 chr10 753667 753800 -139562965 + L1ME4a LINE L1 5973 6121 0 * 1721 286 113 38 chr10 753794 755152 -139561613 + L1MEc LINE L1 9 1468 -4928 1969 130 31 0 chr10 755152 755444 -139561321 + AluSx SINE Alu 1 301 -11 918 214 104 6 chr10 755476 755836 -139560929 + L1ME LINE L1 5543 5931 -629 2038 118 0 0 chr10 755984 756271 -139560494 + AluSx SINE Alu 1 287 -25 1648 176 91 18 chr10 756290 756620 -139560145 + MLT1A1 LTR MaLR 12 365 0 311 317 154 48 chr10 756651 756859 -139559906 + L1MC4a LINE L1 6542 6771 -1037 251 273 20 10 chr10 757052 757151 -139559614 + L1MC4 LINE L1 6810 6909 -1133 442 271 97 20 chr10 757321 757568 -139559197 + L1MC5 LINE L1 6955 7220 -741 2182 119 9 0 chr10 758229 758557 -139558208 + L1PA10 LINE L1 5827 6157 -11 642 189 104 25 chr10 759255 759456 -139557309 + Charlie5 DNA MER1_type 2380 2596 -16 2173 109 3 0 chr10 759706 760009 -139556756 - AluSp SINE Alu -9 304 1 307 336 134 16 chr10 760467 760788 -139555977 - L1M2 LINE L1 -5717 1132 774 1878 125 10 14 chr10 761378 761674 -139555091 + AluSx SINE Alu 1 295 -17 236 140 88 35 chr10 761747 761804 -139554961 - L1 LINE L1 -3326 2820 2761 563 197 21 14 chr10 763088 763230 -139553535 + L1MB8 LINE L1 6027 6169 -9 1703 94 0 0 chr10 763364 763588 -139553177 - AluY SINE Alu -15 296 73 2101 103 6 6 chr10 764205 764516 -139552249 + AluSp SINE Alu 3 313 0 39 22 0 0 chr10 764535 764581 -139552184 + AT_rich Low_complexity Low_complexity 1 46 0 887 118 0 37 chr10 764625 764761 -139552004 + FLAM_C SINE Alu 1 131 -2 32 43 0 0 chr10 764835 764881 -139551884 + AT_rich Low_complexity Low_complexity 1 46 0 21 57 0 0 chr10 765139 765174 -139551591 + AT_rich Low_complexity Low_complexity 1 35 0 1493 207 119 14 chr10 766051 766481 -139550284 + MER39 LTR ERV1 232 706 -1 22 0 0 0 chr10 766783 766805 -139549960 + AT_rich Low_complexity Low_complexity 1 22 0 4640 167 48 45 chr10 767047 767090 -139549675 + L1MA9 LINE L1 5254 5295 -1017 198 0 0 0 chr10 767090 767112 -139549653 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 4640 167 48 45 chr10 767112 767782 -139548983 + L1MA9 LINE L1 5295 5961 -351 1886 122 11 0 chr10 767782 768060 -139548705 + AluSp SINE Alu 2 282 -31 183 42 0 0 chr10 768060 768084 -139548681 + (CA)n Simple_repeat Simple_repeat 1 24 0 4640 167 48 45 chr10 768084 768387 -139548378 + L1MA9 LINE L1 5960 6275 -37 1883 148 6 3 chr10 768401 768712 -139548053 + AluSx SINE Alu 1 312 0 1829 131 7 7 chr10 768715 769006 -139547759 + AluSx SINE Alu 1 291 -21 1961 133 7 7 chr10 769011 769319 -139547446 + AluSx SINE Alu 1 308 -4 3874 146 63 40 chr10 769449 769732 -139547033 - MER6 DNA MER2_type -75 790 515 1724 171 7 0 chr10 769732 770041 -139546724 + AluJb SINE Alu 1 311 -1 3874 146 63 40 chr10 770041 770522 -139546243 - MER6 DNA MER2_type -350 515 9 1627 109 40 8 chr10 770625 770873 -139545892 + AluSx SINE Alu 31 286 -26 183 42 0 0 chr10 771637 771661 -139545104 + (TTA)n Simple_repeat Simple_repeat 1 24 0 554 239 241 52 chr10 772021 772593 -139544172 + L1MC5 LINE L1 7246 7925 -36 2418 55 0 0 chr10 773639 773932 -139542833 - AluY SINE Alu -17 294 2 1859 143 0 19 chr10 773997 774311 -139542454 - AluSx SINE Alu -4 308 1 695 276 43 0 chr10 774572 774782 -139541983 - L1MD3 LINE L1 -170 7825 7607 304 333 87 0 chr10 774969 775095 -139541670 + L1MC5 LINE L1 6973 7109 -852 499 239 81 125 chr10 775322 775988 -139540777 + L1MC5 LINE L1 7273 7909 -52 1874 119 3 7 chr10 775998 776334 -139540431 + AluSx SINE Alu 1 335 0 1312 142 123 26 chr10 776525 776793 -139539972 + AluSx SINE Alu 14 307 -5 349 229 132 62 chr10 776825 776969 -139539796 + L1ME4a LINE L1 5852 6005 -116 21 36 0 0 chr10 777007 777035 -139539730 + AT_rich Low_complexity Low_complexity 1 28 0 601 232 20 33 chr10 777263 777414 -139539351 + Charlie1 DNA MER1_type 2 150 -2611 * 1465 187 68 64 chr10 777398 777885 -139538880 + Charlie1 DNA MER1_type 2272 2760 -1 3708 202 18 63 chr10 777961 778801 -139537964 + L1ME LINE L1 4499 5250 -914 2203 117 0 0 chr10 778801 779110 -139537655 + AluSx SINE Alu 1 309 -3 3708 202 18 63 chr10 779110 779586 -139537179 + L1ME LINE L1 5250 5746 -418 205 321 199 0 chr10 779817 779948 -139536817 - MIR SINE MIR -34 228 72 477 103 15 0 chr10 781160 781228 -139535537 + AluS SINE Alu 2 70 -243 1668 158 34 10 chr10 781430 781722 -139535043 + AluJb SINE Alu 5 303 -9 1776 99 19 83 chr10 782924 783237 -139533528 - AluSx SINE Alu 0 312 20 225 259 71 24 chr10 783354 783439 -139533326 - L2 LINE L2 -3 3310 3222 1910 121 3 16 chr10 783649 783954 -139532811 + AluSq SINE Alu 1 301 -12 1946 237 89 60 chr10 784072 784252 -139532513 + L1MC4 LINE L1 6993 7166 -876 2121 126 0 0 chr10 784252 784554 -139532211 - AluJb SINE Alu -10 302 1 1946 237 89 60 chr10 784554 785073 -139531692 + L1MC4 LINE L1 7166 7668 -374 1989 105 3 7 chr10 785073 785395 -139531370 - AluSx SINE Alu 0 312 3 1946 237 89 60 chr10 785395 785457 -139531308 + L1MC4 LINE L1 7668 7727 -315 2362 65 0 10 chr10 785457 785766 -139530999 - AluY SINE Alu -5 306 1 1946 237 89 60 chr10 785766 785908 -139530857 + L1MC4 LINE L1 7727 7925 -117 241 247 0 14 chr10 786048 786121 -139530644 + L1MC5 LINE L1 7706 7777 -184 2093 106 0 29 chr10 787027 787198 -139529567 - AluSx SINE Alu -10 302 142 2445 63 3 0 chr10 787198 787500 -139529265 - AluSp SINE Alu -8 305 3 2093 106 0 29 chr10 787500 787639 -139529126 - AluSx SINE Alu -170 142 1 371 143 0 0 chr10 787639 787695 -139529070 - AluSg/x SINE Alu -167 133 78 2074 76 7 28 chr10 788493 788806 -139527959 - AluSq SINE Alu 0 307 1 917 145 0 0 chr10 788921 789106 -139527659 - FRAM SINE Alu 0 40 1 335 228 43 54 chr10 789270 789362 -139527403 - L1ME LINE L1 -678 5443 5353 428 214 309 0 chr10 789960 790128 -139526637 + MLT1F1 LTR MaLR 189 408 -159 2174 118 0 0 chr10 790128 790432 -139526333 - AluSx SINE Alu -8 304 1 946 203 0 0 chr10 790604 790786 -139525979 - AluJb SINE Alu -1 311 130 26 50 0 0 chr10 792236 792276 -139524489 + AT_rich Low_complexity Low_complexity 1 40 0 1132 84 0 0 chr10 792287 792429 -139524336 + AluSq/x SINE Alu 1 142 -170 231 61 122 41 chr10 792574 792623 -139524142 - L1MC/D LINE L1 -668 5574 5522 * 258 186 36 0 chr10 792614 792684 -139524081 - L1M3 LINE L1 -587 5593 5522 1210 180 24 87 chr10 792685 792974 -139523791 - L1MC/D LINE L1 -659 5583 5357 1377 161 120 0 chr10 792974 793241 -139523524 - AluJo SINE Alu -13 299 1 1210 180 24 87 chr10 793241 793588 -139523177 - L1MC/D LINE L1 -885 5357 4990 * 1752 245 39 51 chr10 793571 794430 -139522335 - L1M3 LINE L1 -1397 4749 3951 2078 90 14 3 chr10 794432 794721 -139522044 + AluSx SINE Alu 1 292 -20 212 321 25 12 chr10 795035 795116 -139521649 + MIR3 SINE MIR 78 159 -49 1911 145 3 3 chr10 795287 795583 -139521182 - AluSx SINE Alu -16 296 1 2306 78 3 7 chr10 796029 796336 -139520429 - AluSp SINE Alu -7 306 1 2442 229 77 13 chr10 796619 796706 -139520059 - L1MD1 LINE L1 0 6242 6162 1736 106 4 4 chr10 796706 796960 -139519805 - AluSq SINE Alu -59 254 1 2442 229 77 13 chr10 796960 797550 -139519215 - L1MD1 LINE L1 -80 6162 5522 268 179 34 0 chr10 797606 797674 -139519091 - L1M3 LINE L1 -587 5593 5524 268 179 34 0 chr10 797671 797739 -139519026 - L1M3 LINE L1 -587 5593 5524 * 304 142 35 0 chr10 797736 797804 -139518961 - L1M3 LINE L1 -587 5593 5524 * 331 155 34 0 chr10 797801 797870 -139518895 - L1M4 LINE L1 -581 5593 5523 2269 46 23 29 chr10 800658 800964 -139515801 - AluY SINE Alu -7 304 1 2032 132 0 13 chr10 801472 801783 -139514982 - AluSx SINE Alu -5 307 1 22 0 0 0 chr10 801987 802009 -139514756 + AT_rich Low_complexity Low_complexity 1 22 0 1742 164 13 0 chr10 802109 802414 -139514351 - AluJb SINE Alu -3 309 1 432 324 0 22 chr10 803699 803881 -139512884 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 365 343 0 17 chr10 803899 804080 -139512685 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 350 210 28 39 chr10 804074 804255 -139512510 + CT-rich Low_complexity Low_complexity 2 180 0 * 1861 170 6 20 chr10 804354 804707 -139512058 + L1MC1 LINE L1 5798 6145 -188 2205 109 6 10 chr10 804743 805054 -139511711 + AluSx SINE Alu 2 311 -1 546 235 143 21 chr10 805145 805383 -139511382 + L1MCa LINE L1 31 297 -6129 680 85 21 0 chr10 805433 805527 -139511238 + L1MCa LINE L1 1780 1875 -4551 1111 89 19 0 chr10 805550 805707 -139511058 - MSTB1 LTR MaLR 0 432 273 297 127 36 0 chr10 805706 805761 -139511004 - MSTB1 LTR MaLR -103 329 273 * 281 143 36 0 chr10 805759 805815 -139510950 - MSTB1 LTR MaLR -102 330 273 * 316 107 36 0 chr10 805813 805869 -139510896 - MSTB1 LTR MaLR -102 330 273 260 132 38 0 chr10 805869 805922 -139510843 - MSTB1 LTR MaLR -104 328 274 1733 173 35 0 chr10 805922 806240 -139510525 - MSTB1 LTR MaLR -103 329 1 944 182 53 53 chr10 806245 806327 -139510438 - MLT1B LTR MaLR -163 227 146 2185 105 0 13 chr10 806327 806640 -139510125 + AluSp SINE Alu 1 309 -4 944 182 53 53 chr10 806640 806782 -139509983 - MLT1B LTR MaLR -243 147 3 195 288 17 0 chr10 806782 806841 -139509924 - L2 LINE L2 -1041 2273 2214 928 256 154 50 chr10 806855 807375 -139509390 + MLT1E1 LTR MaLR 69 642 -12 1083 201 247 25 chr10 807970 808294 -139508471 - MSTD LTR MaLR 0 396 1 2185 98 0 0 chr10 808391 808688 -139508077 - AluSg SINE Alu -13 297 1 275 85 21 0 chr10 810365 810412 -139506353 + (TG)n Simple_repeat Simple_repeat 1 48 0 1997 161 0 3 chr10 810496 810801 -139505964 + AluJo SINE Alu 1 304 -8 1039 276 87 38 chr10 811237 811824 -139504941 + HAL1 LINE L1 574 1189 -1318 1885 88 0 4 chr10 812087 812325 -139504440 - AluSx SINE Alu -75 237 1 250 337 11 32 chr10 812393 812488 -139504277 + L3 LINE CR1 1482 1574 -3 674 327 77 23 chr10 813164 813513 -139503252 + L3 LINE CR1 900 1267 -310 2018 159 3 16 chr10 813771 814086 -139502679 + AluSx SINE Alu 1 311 -1 445 359 80 11 chr10 814519 814781 -139501984 + L3 LINE CR1 1297 1576 -1 420 313 16 1 chr10 815888 816048 -139500717 + L1ME LINE L1 7 169 -5901 1021 214 102 14 chr10 816174 816351 -139500414 + MSTD LTR MaLR 18 178 -187 2215 117 0 10 chr10 816351 816651 -139500114 - AluSq SINE Alu -16 297 1 1021 214 102 14 chr10 816651 816809 -139499956 + MSTD LTR MaLR 178 356 -9 2446 75 0 0 chr10 817682 817974 -139498791 - AluY SINE Alu -19 292 1 268 346 73 0 chr10 818761 818897 -139497868 + MIR SINE MIR 63 208 -54 185 328 164 8 chr10 819057 819179 -139497586 + MIR SINE MIR 122 262 0 309 241 58 11 chr10 819638 819725 -139497040 + L2 LINE L2 3174 3264 -8 1441 158 39 0 chr10 821455 821722 -139495043 - AluJb SINE Alu 0 321 46 1031 157 0 35 chr10 821725 821897 -139494868 + AluJb SINE Alu 147 312 0 422 136 0 0 chr10 821892 821951 -139494814 - AluJb SINE Alu -247 65 7 * 1379 137 26 0 chr10 821962 822188 -139494577 - MER2 DNA MER2_type -112 233 2 314 191 59 112 chr10 822414 822566 -139494199 - L1MEc LINE L1 -2872 3257 3114 518 283 108 36 chr10 822710 822933 -139493832 - L1MEc LINE L1 -4134 2176 1938 344 308 31 54 chr10 823087 823426 -139493339 - L1MEc LINE L1 -861 1629 1325 364 254 65 43 chr10 823447 823585 -139493180 - L1MEc LINE L1 -4909 1210 1070 925 284 104 7 chr10 823600 824012 -139492753 + LTR33 LTR ERVL 2 453 -68 2296 89 0 0 chr10 824012 824292 -139492473 + AluY SINE Alu 1 280 -31 8434 156 22 4 chr10 824292 825731 -139491034 - MLT1A2-int LTR MaLR -186 1465 1 608 129 0 0 chr10 825733 825826 -139490939 - MSTB LTR MaLR -333 93 1 2179 119 10 0 chr10 825885 826188 -139490577 - AluSg SINE Alu -4 306 1 1841 133 91 3 chr10 826427 826713 -139490052 - AluSx SINE Alu -1 311 1 24 0 0 0 chr10 826725 826749 -139490016 + AT_rich Low_complexity Low_complexity 1 24 0 303 228 114 57 chr10 827676 827706 -139489059 + MLT1I LTR MaLR 280 307 -102 1428 201 28 76 chr10 827706 828099 -139488666 - MLT1A2 LTR MaLR 0 374 1 303 228 114 57 chr10 828099 828191 -139488574 + MLT1I LTR MaLR 307 409 0 22 35 0 0 chr10 828239 828268 -139488497 + AT_rich Low_complexity Low_complexity 1 29 0 1385 139 0 42 chr10 829038 829281 -139487484 + AluSg/x SINE Alu 74 307 0 245 340 65 22 chr10 829331 829508 -139487257 + MIR SINE MIR 10 193 -67 189 326 63 0 chr10 829672 829767 -139486998 + MIR SINE MIR 150 250 -12 196 295 67 19 chr10 830125 830230 -139486535 - L2 LINE L2 -3 3269 3160 2271 95 3 3 chr10 830990 831286 -139485479 + AluSx SINE Alu 11 306 -6 353 266 101 0 chr10 831544 831653 -139485112 + L3 LINE CR1 664 783 -794 556 228 151 53 chr10 831739 831945 -139484820 + MIR SINE MIR 2 227 -35 2239 87 27 7 chr10 833436 833734 -139483031 - AluSq SINE Alu -9 304 1 2098 145 14 0 chr10 834060 834356 -139482409 - AluSx SINE Alu -12 300 1 212 296 157 35 chr10 834637 834752 -139482013 - L2 LINE L2 0 3313 3185 2551 49 0 19 chr10 834760 835067 -139481698 + AluY SINE Alu 1 301 -10 287 274 123 0 chr10 835508 835581 -139481184 + L2 LINE L2 3136 3217 -55 2861 22 0 0 chr10 836003 836314 -139480451 - AluY SINE Alu 0 311 1 2549 67 0 0 chr10 836438 836736 -139480029 + AluY SINE Alu 1 298 -13 198 191 270 0 chr10 837055 837118 -139479647 - MIR SINE MIR -63 145 66 2113 123 20 7 chr10 837567 837868 -139478897 - AluSx SINE Alu -7 305 1 1973 82 4 0 chr10 838136 838380 -139478385 - AluSq SINE Alu -68 245 1 240 214 107 0 chr10 838454 838510 -139478255 + L2 LINE L2 3211 3272 0 2128 109 7 7 chr10 838578 838888 -139477877 - AluSx SINE Alu 0 310 1 299 265 312 12 chr10 839135 839305 -139477460 - L2 LINE L2 -19 3294 3074 639 279 293 12 chr10 839437 840199 -139476566 - L2 LINE L2 -1050 2264 1289 21 36 0 0 chr10 840394 840422 -139476343 + AT_rich Low_complexity Low_complexity 1 28 0 200 246 56 84 chr10 841186 841328 -139475437 + MER5A DNA MER1_type 10 147 -42 21 0 0 0 chr10 842381 842402 -139474363 + AT_rich Low_complexity Low_complexity 1 21 0 1940 169 0 16 chr10 842402 842715 -139474050 - AluJb SINE Alu 0 312 5 482 290 54 11 chr10 842866 843052 -139473713 - MER3 DNA MER1_type -1 208 15 2203 122 0 13 chr10 843429 843741 -139473024 - AluSq SINE Alu -4 309 2 2277 135 0 0 chr10 843997 844309 -139472456 + AluSq SINE Alu 1 312 -1 2491 63 13 0 chr10 844556 844856 -139471909 - AluY SINE Alu -7 304 1 267 174 22 0 chr10 845882 845928 -139470837 + MER5A DNA MER1_type 2 48 -141 1115 204 28 45 chr10 845928 846231 -139470534 - L1 LINE L1 -3222 3945 3638 2249 119 6 3 chr10 846231 846542 -139470223 - AluSx SINE Alu 0 312 1 1115 204 28 45 chr10 846542 846831 -139469934 - L1 LINE L1 -3529 3638 3252 * 8508 194 80 24 chr10 846816 849449 -139467316 - L1 LINE L1 -4178 2990 181 2302 76 3 10 chr10 849449 849763 -139467002 - AluY SINE Alu 0 311 1 8508 194 80 24 chr10 849763 849952 -139466813 - L1 LINE L1 -6987 181 4 2285 96 3 0 chr10 850676 850967 -139465798 + AluSq SINE Alu 1 292 -21 956 138 0 0 chr10 851772 851910 -139464855 + FLAM_C SINE Alu 1 138 -5 380 305 177 55 chr10 852184 852451 -139464314 - L1M4 LINE L1 -801 5345 5112 2041 116 35 3 chr10 852451 852735 -139464030 + AluSx SINE Alu 2 294 -18 380 305 177 55 chr10 852735 853054 -139463711 - L1M4 LINE L1 -1034 5112 4687 1738 154 62 0 chr10 854049 854321 -139462444 + AluJb SINE Alu 1 289 -23 1908 114 0 22 chr10 857289 857562 -139459203 - AluSx SINE Alu -4 308 42 198 191 270 0 chr10 858078 858141 -139458624 - MIR SINE MIR -63 145 66 2263 104 3 3 chr10 858592 858890 -139457875 - AluSg SINE Alu -12 298 1 2325 75 20 3 chr10 858892 859186 -139457579 - AluSq SINE Alu -13 300 2 2125 122 10 10 chr10 860611 860914 -139455851 - AluSx SINE Alu -8 304 2 620 156 0 0 chr10 861979 862075 -139454690 + Tigger4(Zombi) DNA MER2_type 1 96 -2635 226 103 0 26 chr10 862072 862111 -139454654 + Tigger4(Zombi) DNA MER2_type 2136 2173 -558 * 622 259 0 8 chr10 862111 862242 -139454523 + FLAM_A SINE Alu 2 131 -2 1880 159 6 22 chr10 862244 862558 -139454207 + AluJb SINE Alu 1 309 -3 22 35 0 0 chr10 862558 862587 -139454178 + AT_rich Low_complexity Low_complexity 1 29 0 3281 160 40 5 chr10 862587 863143 -139453622 + Tigger4(Zombi) DNA MER2_type 2156 2730 -1 238 263 132 0 chr10 865135 865211 -139451554 + L2 LINE L2 3168 3253 -19 3644 201 84 22 chr10 865592 865896 -139450869 + MER21B LTR ERV1 1 285 -578 2226 95 0 23 chr10 865896 866201 -139450564 + AluSx SINE Alu 1 298 -14 3644 201 84 22 chr10 866201 866695 -139450070 + MER21B LTR ERV1 285 848 -15 187 167 0 0 chr10 866905 866935 -139449830 + L2 LINE L2 3216 3245 -27 2593 62 0 0 chr10 866985 867290 -139449475 + AluY SINE Alu 1 305 -6 2216 117 0 0 chr10 867476 867774 -139448991 + AluSq SINE Alu 1 298 -15 2310 121 70 17 chr10 867931 868346 -139448419 + LTR23 LTR ERV1 1 437 0 3542 208 54 60 chr10 869224 870166 -139446599 + LTR23-int LTR ERV1 1558 2493 -3838 1071 62 72 135 chr10 870166 870374 -139446391 + MER30 DNA MER1_type 1 195 -35 711 203 172 55 chr10 870390 870564 -139446201 + LTR23-int LTR ERV1 769 984 -4139 1383 141 97 62 chr10 870564 870854 -139445911 + AluJb SINE Alu 1 300 -12 711 203 172 55 chr10 870854 870935 -139445830 + LTR23-int LTR ERV1 984 1054 -4069 323 247 45 11 chr10 870936 871025 -139445740 + MER34C LTR ERV1 241 332 -253 1901 196 126 105 chr10 871035 871613 -139445152 + LTR23-int LTR ERV1 1160 1724 -3399 266 200 0 36 chr10 871613 871635 -139445130 + AluSg/x SINE Alu 116 135 -167 289 79 0 0 chr10 871635 871673 -139445092 + Alu SINE Alu 1 38 -262 * 1461 156 0 0 chr10 871673 871898 -139444867 + AluSg/x SINE Alu 73 297 -15 1901 196 126 105 chr10 871898 872401 -139444364 + LTR23-int LTR ERV1 1727 2325 -2798 531 77 26 0 chr10 872407 872485 -139444280 + AluSg/x SINE Alu 217 296 -16 2042 102 0 22 chr10 872494 872769 -139443996 + AluSg SINE Alu 6 274 -36 1369 210 61 6 chr10 872819 873147 -139443618 + LTR23-int LTR ERV1 2319 2664 -2459 841 153 8 0 chr10 873147 873278 -139443487 + FRAM SINE Alu 35 166 -10 3636 128 92 48 chr10 873279 873497 -139443268 + LTR23-int LTR ERV1 3810 4017 -2314 2219 67 3 89 chr10 873497 873824 -139442941 + AluY SINE Alu 1 299 -12 3636 128 92 48 chr10 873824 874358 -139442407 + LTR23-int LTR ERV1 4017 4595 -1736 2290 91 3 0 chr10 874387 874673 -139442092 + AluSp SINE Alu 1 287 -26 206 313 50 0 chr10 874941 875021 -139441744 + MIR SINE MIR 97 180 -82 2068 119 0 11 chr10 875087 875372 -139441393 - AluSx SINE Alu -30 282 1 210 42 62 42 chr10 875424 875472 -139441293 + T-rich Low_complexity Low_complexity 3 51 0 1603 151 48 11 chr10 875811 876083 -139440682 + AluJb SINE Alu 1 282 -30 2211 92 0 35 chr10 876440 876756 -139440009 - AluSq SINE Alu -8 305 1 2179 106 3 13 chr10 877627 877929 -139438836 - AluSx SINE Alu -13 299 1 25 0 0 0 chr10 878316 878341 -139438424 + AT_rich Low_complexity Low_complexity 1 25 0 2214 103 0 0 chr10 878850 879159 -139437606 + AluSx SINE Alu 1 309 0 442 300 55 38 chr10 879575 879812 -139436953 + L2 LINE L2 3069 3309 -4 1366 147 100 47 chr10 880437 880716 -139436049 - AluJo SINE Alu -18 294 1 479 203 0 0 chr10 881311 881390 -139435375 - tRNA-Ser-TCA tRNA tRNA -4 81 3 2130 111 3 10 chr10 881595 881893 -139434872 - AluY SINE Alu -15 296 1 387 0 0 0 chr10 881965 882008 -139434757 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 502 162 0 76 chr10 882010 882115 -139434650 - AluJo SINE Alu -31 281 185 592 224 8 0 chr10 882127 882252 -139434513 - AluJo SINE Alu -186 126 1 1905 130 3 89 chr10 882316 882685 -139434080 + MER1B DNA MER1_type 1 337 0 2491 87 3 0 chr10 883380 883692 -139433073 - AluSp SINE Alu 0 313 1 1898 156 7 7 chr10 883890 884192 -139432573 - AluSx SINE Alu -10 302 1 186 245 82 0 chr10 884426 884475 -139432290 - MIR SINE MIR -126 82 30 316 130 0 0 chr10 885300 885346 -139431419 - tRNA-Gly-GGC tRNA tRNA -28 46 1 24 32 0 0 chr10 885500 885531 -139431234 + AT_rich Low_complexity Low_complexity 1 31 0 2358 61 0 17 chr10 885585 885879 -139430886 - AluY SINE Alu -22 289 1 2085 134 3 3 chr10 886017 886323 -139430442 - AluJb SINE Alu -6 306 1 507 125 313 9 chr10 886350 886462 -139430303 - LTR23 LTR ERV1 0 437 292 515 189 54 0 chr10 886509 886620 -139430145 - LTR23-int LTR ERV1 -223 4900 4784 6076 140 36 12 chr10 886636 887678 -139429087 - LTR23-int LTR ERV1 -663 5668 4602 1617 188 4 4 chr10 887678 887950 -139428815 + AluJo SINE Alu 3 274 -38 25 0 0 0 chr10 888345 888370 -139428395 + AT_rich Low_complexity Low_complexity 1 25 0 1808 163 42 22 chr10 888370 888727 -139428038 - L1MB3 LINE L1 -7 6176 5813 682 155 66 94 chr10 888729 888910 -139427855 - MLT2B2 LTR ERVL 0 515 340 1259 283 58 16 chr10 889010 889601 -139427164 - L1MDb LINE L1 -3890 2650 2112 4032 190 30 7 chr10 889686 890235 -139426530 + MER44D DNA MER2_type 6 448 -2039 1617 101 8 38 chr10 890235 890473 -139426292 + AluSx SINE Alu 1 231 -81 4032 190 30 7 chr10 890473 890635 -139426130 + MER44D DNA MER2_type 448 605 0 2295 102 3 0 chr10 890664 890967 -139425798 - AluY SINE Alu -7 304 1 1798 212 50 18 chr10 890969 891465 -139425300 - L1MDb LINE L1 -4488 2052 1541 24233 31 2 0 chr10 891480 895124 -139421641 - L1PA3 LINE L1 0 6155 2513 3601 63 9 0 chr10 895128 895588 -139421177 - L1PA3 LINE L1 -5626 520 57 743 233 54 18 chr10 895589 895858 -139420907 - L1MDb LINE L1 -4988 1555 1196 804 80 0 0 chr10 896050 896150 -139420615 - AluSp/q SINE Alu -15 298 199 1449 71 0 0 chr10 896161 896330 -139420435 + AluY SINE Alu 1 169 -142 810 206 17 0 chr10 896438 896613 -139420152 + AluY SINE Alu 111 288 -23 1101 171 0 6 chr10 896639 896820 -139419945 - AluSx SINE Alu -132 180 1 369 258 158 54 chr10 897259 897701 -139419064 + L1M2 LINE L1 756 1243 -5606 225 351 21 64 chr10 897956 898144 -139418621 - L1MDb LINE L1 -6310 230 51 814 324 21 24 chr10 898215 898592 -139418173 - L1MEc LINE L1 -4394 2002 1627 2132 122 0 0 chr10 898658 898945 -139417820 - AluSx SINE Alu -25 287 1 466 299 44 28 chr10 899810 900061 -139416704 + L1MB3 LINE L1 5304 5558 -2250 1060 123 0 7 chr10 900547 900702 -139416063 + FRAM SINE Alu 1 154 -12 1330 191 61 29 chr10 900949 901294 -139415471 + L1MB3 LINE L1 5807 6162 -21 1314 77 0 22 chr10 901295 901460 -139415305 - AluSc SINE Alu -13 296 134 2267 119 7 0 chr10 901460 901763 -139415002 - AluSx SINE Alu -7 305 1 1314 77 0 22 chr10 901763 901778 -139414987 - AluSc SINE Alu -175 134 120 696 188 5 0 chr10 901965 902184 -139414581 + (CA)n Simple_repeat Simple_repeat 1 220 0 516 244 0 0 chr10 902232 902412 -139414353 + (CA)n Simple_repeat Simple_repeat 1 180 0 189 171 0 0 chr10 905360 905395 -139411370 + T-rich Low_complexity Low_complexity 1 35 0 4864 174 16 7 chr10 905403 906380 -139410385 - L1PB4 LINE L1 -3 6153 5171 3262 187 14 6 chr10 906381 907023 -139409742 - L1PB4 LINE L1 -1131 5015 4369 215 244 9 0 chr10 907142 907257 -139409508 + (CA)n Simple_repeat Simple_repeat 1 116 0 318 165 25 41 chr10 907418 907539 -139409226 + GA-rich Low_complexity Low_complexity 2 120 0 1148 184 9 18 chr10 907776 907999 -139408766 - AluSg SINE Alu -52 258 38 2177 118 0 0 chr10 909058 909347 -139407418 + AluSx SINE Alu 11 299 -13 514 285 29 17 chr10 909468 909640 -139407125 + MIR SINE MIR 64 237 -25 518 197 8 47 chr10 909700 909827 -139406938 + MER33 DNA MER1_type 34 155 -169 431 297 27 76 chr10 909837 910100 -139406665 + AluJb SINE Alu 1 250 -52 1908 163 0 0 chr10 910310 910593 -139406172 + AluJb SINE Alu 1 283 -29 238 228 88 0 chr10 911433 911490 -139405275 - AluJ/FLAM SINE Alu -240 62 1 1733 130 23 47 chr10 911569 911869 -139404896 + AluSx SINE Alu 1 293 -19 262 264 11 11 chr10 911870 911957 -139404808 - L1ME LINE L1 -325 5796 5710 183 222 19 56 chr10 911973 912027 -139404738 + L2 LINE L2 3006 3057 -215 30 0 0 0 chr10 913486 913516 -139403249 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr10 913801 913821 -139402944 + (A)n Simple_repeat Simple_repeat 1 20 0 1960 79 120 0 chr10 916120 916386 -139400379 - AluSc SINE Alu 0 299 2 251 250 12 0 chr10 916465 916545 -139400220 + (CCCCAG)n Simple_repeat Simple_repeat 6 86 0 2276 74 0 0 chr10 917876 918173 -139398592 + AluY SINE Alu 1 297 -14 3366 176 18 22 chr10 918853 919092 -139397673 + L1MA4 LINE L1 5590 5828 -472 2295 88 0 3 chr10 919092 919397 -139397368 + AluY SINE Alu 1 304 -7 3366 176 18 22 chr10 919397 919868 -139396897 + L1MA4 LINE L1 5828 6297 -3 21 0 0 0 chr10 919878 919899 -139396866 + AT_rich Low_complexity Low_complexity 1 21 0 1285 201 115 3 chr10 919910 920309 -139396456 - MER31A LTR ERV1 -1 660 11 378 0 0 0 chr10 920909 920951 -139395814 + (CA)n Simple_repeat Simple_repeat 1 42 0 2213 93 0 7 chr10 921156 921458 -139395307 + AluSx SINE Alu 1 300 -12 231 152 0 0 chr10 921857 921903 -139394862 + CT-rich Low_complexity Low_complexity 1 46 0 2195 83 0 7 chr10 921999 922299 -139394466 - AluSx SINE Alu -9 303 6 643 311 27 18 chr10 923043 923262 -139393503 - MIR SINE MIR -4 258 38 231 302 0 0 chr10 923839 923902 -139392863 + HAL1b LINE L1 245 307 -1041 264 269 90 35 chr10 923910 924055 -139392710 + L2 LINE L2 1390 1542 -1772 997 105 0 0 chr10 924062 924195 -139392570 + AluSq/x SINE Alu 1 133 -180 2309 79 0 3 chr10 924197 924502 -139392263 + AluY SINE Alu 1 304 -7 574 264 116 27 chr10 924508 924766 -139391999 + L2 LINE L2 1552 1832 -1482 1904 112 7 17 chr10 925288 925575 -139391190 - AluSx SINE Alu -26 286 3 23 0 0 0 chr10 925660 925683 -139391082 + AT_rich Low_complexity Low_complexity 1 23 0 1473 141 28 8 chr10 925900 926149 -139390616 + AluJb SINE Alu 6 259 -53 1282 195 64 20 chr10 926587 926931 -139389834 - L1M4 LINE L1 -2117 4029 3671 2090 104 3 0 chr10 927048 927337 -139389428 + AluSg SINE Alu 3 292 -18 376 114 46 80 chr10 927457 927632 -139389133 + (TATAA)n Simple_repeat Simple_repeat 4 172 0 24 32 0 0 chr10 927637 927668 -139389097 + AT_rich Low_complexity Low_complexity 1 31 0 596 190 7 49 chr10 927698 927753 -139389012 - L1M4 LINE L1 -2520 3626 3570 2260 92 3 0 chr10 927753 928057 -139388708 - AluSq SINE Alu -8 305 1 596 190 7 49 chr10 928057 928143 -139388622 - L1M4 LINE L1 -2576 3570 3491 1552 107 37 97 chr10 928261 928560 -139388205 - AluSx SINE Alu -7 305 25 2416 47 0 3 chr10 928857 929156 -139387609 - AluY SINE Alu -13 298 1 2177 29 4 7 chr10 930112 930384 -139386381 + AluY SINE Alu 27 297 -14 209 261 0 0 chr10 930975 931021 -139385744 - MIR SINE MIR -5 257 212 2188 90 0 10 chr10 931887 932197 -139384568 - AluSg SINE Alu -3 307 1 269 303 68 15 chr10 932275 932407 -139384358 - L2 LINE L2 -222 3050 2912 554 245 206 12 chr10 932881 933134 -139383631 - L1ME3 LINE L1 -31 6131 5830 231 224 20 0 chr10 933526 933575 -139383190 - L1ME3 LINE L1 -648 5518 5469 276 150 21 16 chr10 933577 933640 -139383125 - L1ME3 LINE L1 -729 5433 5366 2506 167 106 0 chr10 933642 934163 -139382602 - L1MC1 LINE L1 -2 6331 5756 428 221 33 13 chr10 936157 936334 -139380431 + MER20 DNA MER1_type 1 218 -1 2306 81 7 10 chr10 937691 938000 -139378765 - AluSg SINE Alu -2 308 1 538 250 88 7 chr10 940287 940433 -139376332 - MER105 DNA DNA -1 203 46 232 175 0 0 chr10 940433 940473 -139376292 - MER58 DNA MER1_type 0 2420 2381 827 206 122 55 chr10 940475 940713 -139376052 - MER58 DNA MER1_type -2165 255 2 1909 153 0 0 chr10 941047 941335 -139375430 - AluSx SINE Alu -18 294 7 285 75 0 0 chr10 941441 941481 -139375284 + (TG)n Simple_repeat Simple_repeat 2 41 0 636 240 8 0 chr10 941646 941767 -139374998 + MER2 DNA MER2_type 1 122 -223 738 226 7 0 chr10 941779 941916 -139374849 + Tigger3(Golem) DNA MER2_type 5 142 -2887 528 155 68 142 chr10 941914 942062 -139374703 + Tigger3(Golem) DNA MER2_type 2772 2908 -121 * 345 267 155 0 chr10 942559 942675 -139374090 + Tigger3(Golem) DNA MER2_type 2888 3021 -8 778 162 146 22 chr10 942692 942877 -139373888 + MER2 DNA MER2_type 138 345 0 533 137 226 32 chr10 942956 943080 -139373685 - AluSg/x SINE Alu -29 283 136 21 0 0 0 chr10 943867 943888 -139372877 + GC_rich Low_complexity Low_complexity 1 21 0 1834 131 14 0 chr10 944709 945000 -139371765 - AluSp SINE Alu -18 295 1 624 203 199 16 chr10 945114 945365 -139371400 - Charlie1 DNA MER1_type 0 2761 2465 2913 160 71 11 chr10 945400 945938 -139370827 - MER6A DNA MER2_type 0 605 36 3088 178 44 58 chr10 945952 946740 -139370025 - Charlie1 DNA MER1_type -397 2364 1588 * 3923 203 110 92 chr10 946728 946931 -139369834 - Tigger1 DNA MER2_type -210 2208 2010 2065 118 0 0 chr10 946931 947219 -139369546 - AluSg SINE Alu -22 288 1 3923 203 110 92 chr10 947219 948061 -139368704 - Tigger1 DNA MER2_type -408 2010 1185 1549 134 17 0 chr10 948061 948293 -139368472 - AluSx SINE Alu -19 293 58 3923 203 110 92 chr10 948293 948835 -139367930 - Tigger1 DNA MER2_type -1233 1185 654 1150 111 0 33 chr10 948835 949015 -139367750 - AluJo SINE Alu -15 297 124 3923 203 110 92 chr10 949015 949393 -139367372 - Tigger1 DNA MER2_type -1764 654 1 1885 190 114 12 chr10 949808 950230 -139366535 + MLT1C LTR MaLR 1 465 -2 2224 62 7 0 chr10 951246 951534 -139365231 - AluSg SINE Alu -20 290 1 327 337 54 30 chr10 953429 953595 -139363170 - L3 LINE CR1 -423 1154 985 214 342 111 0 chr10 953633 953750 -139363015 + MIR SINE MIR 73 202 -60 626 328 111 32 chr10 953812 954245 -139362520 - L3 LINE CR1 -605 972 506 2013 122 0 3 chr10 954524 954820 -139361945 + AluSx SINE Alu 1 295 -17 194 309 0 0 chr10 955036 955091 -139361674 - L2 LINE L2 -1 3271 3217 2157 154 3 11 chr10 955548 955899 -139360866 + MER7A DNA MER2_type 1 346 0 262 305 86 51 chr10 956015 956212 -139360553 + L2 LINE L2 926 1129 -2185 251 133 22 22 chr10 956226 956238 -139360527 - MER46A DNA MER2_type -83 153 142 1149 176 134 58 chr10 956238 956394 -139360371 + MER46B DNA MER2_type 3 71 -2660 1867 135 7 3 chr10 956394 956690 -139360075 + AluSx SINE Alu 1 297 -15 1149 176 134 58 chr10 956690 956846 -139359919 + MER46B DNA MER2_type 71 214 -22 1932 293 67 30 chr10 957547 957642 -139359123 + L1MDa LINE L1 21 111 -6429 1920 140 7 0 chr10 957642 957935 -139358830 + AluSg SINE Alu 1 295 -15 1932 293 67 30 chr10 957935 958584 -139358181 + L1MDa LINE L1 111 793 -5747 4344 202 175 20 chr10 958629 959420 -139357345 + L1MDa LINE L1 874 1541 -4999 2096 106 13 10 chr10 959420 959731 -139357034 - AluSx SINE Alu 0 312 1 4344 202 175 20 chr10 959731 960318 -139356447 + L1MDa LINE L1 1541 2466 -4074 1891 248 92 26 chr10 960326 960958 -139355807 + L1MB8 LINE L1 3776 4365 -1877 2187 85 0 3 chr10 960958 961252 -139355513 - AluY SINE Alu -18 293 1 1891 248 92 26 chr10 961252 961553 -139355212 + L1MB8 LINE L1 4365 4645 -1597 2335 96 59 31 chr10 961553 961907 -139354858 - THE1B LTR MaLR 0 364 1 1891 248 92 26 chr10 961907 962586 -139354179 + L1MB8 LINE L1 4645 5489 -753 * 2150 154 27 36 chr10 962583 963024 -139353741 + L1MA4A LINE L1 5674 6110 -193 2039 47 95 0 chr10 963036 963310 -139353455 + AluY SINE Alu 1 300 -11 280 227 40 0 chr10 963318 963393 -139353372 + L1MA4A LINE L1 6182 6259 -44 2160 201 121 53 chr10 963405 964051 -139352714 + L1MB8 LINE L1 5473 6162 -16 1698 248 127 19 chr10 964053 964207 -139352558 + L1MD2 LINE L1 5587 5723 -636 180 0 0 0 chr10 964207 964227 -139352538 + (TA)n Simple_repeat Simple_repeat 2 21 0 1698 248 127 19 chr10 964227 964758 -139352007 + L1MD2 LINE L1 5723 6346 -13 2041 132 0 7 chr10 964760 965063 -139351702 + AluSx SINE Alu 1 301 -11 713 192 215 0 chr10 966494 966713 -139350052 + MER33 DNA MER1_type 55 320 -4 22 0 0 0 chr10 966810 966832 -139349933 + AT_rich Low_complexity Low_complexity 1 22 0 1816 118 21 0 chr10 967287 967567 -139349198 - AluSp SINE Alu -25 288 3 1595 177 21 67 chr10 968530 968903 -139347862 - MLT1B LTR MaLR 0 390 35 702 215 44 39 chr10 968918 969123 -139347642 + MER3 DNA MER1_type 1 206 -3 200 232 54 18 chr10 970138 970194 -139346571 + MIR SINE MIR 93 150 -112 1553 70 0 19 chr10 970234 970447 -139346318 - L1PA7 LINE L1 0 6154 5946 2112 111 7 0 chr10 970737 971035 -139345730 - AluSx SINE Alu -12 300 1 2212 101 0 0 chr10 971490 971787 -139344978 + AluY SINE Alu 1 297 -14 1676 98 161 4 chr10 971854 972109 -139344656 + AluSc SINE Alu 2 296 -3 22 56 0 0 chr10 972866 972902 -139343863 + AT_rich Low_complexity Low_complexity 1 36 0 426 154 56 58 chr10 973172 973274 -139343491 - MLT1E2 LTR MaLR 0 626 468 30 0 0 0 chr10 973297 973327 -139343438 + AT_rich Low_complexity Low_complexity 1 30 0 803 147 0 0 chr10 973787 973903 -139342862 - FLAM_C SINE Alu -23 120 5 2112 123 0 0 chr10 974177 974477 -139342288 - AluSx SINE Alu -12 300 1 2117 98 27 0 chr10 974622 974917 -139341848 - AluSg SINE Alu -7 303 1 2343 68 0 13 chr10 975239 975546 -139341219 + AluY SINE Alu 1 303 -8 2195 92 0 13 chr10 976287 976591 -139340174 + AluSg SINE Alu 1 300 -10 432 167 94 10 chr10 976706 976802 -139339963 + AluJb SINE Alu 191 294 -18 213 204 0 74 chr10 977260 977629 -139339136 + (CTGGGG)n Simple_repeat Simple_repeat 1 341 0 224 318 124 8 chr10 978456 978585 -139338180 + MIR3 SINE MIR 44 187 -21 2159 92 3 0 chr10 980057 980352 -139336413 + AluSg SINE Alu 1 296 -14 1835 94 7 42 chr10 980439 980748 -139336017 + AluY SINE Alu 1 298 -13 935 417 41 17 chr10 984784 985079 -139331686 - AluSx SINE Alu 0 302 1 8107 138 50 38 chr10 987261 988701 -139328064 - Tigger1 DNA MER2_type -960 1458 1 390 265 108 64 chr10 989499 989703 -139327062 - HAL1 LINE L1 -2268 239 27 1176 131 0 0 chr10 989779 989954 -139326811 - AluSg/x SINE Alu -17 295 121 21 0 0 0 chr10 989954 989975 -139326790 + AT_rich Low_complexity Low_complexity 1 21 0 1983 124 3 0 chr10 989975 990266 -139326499 - AluSx SINE Alu -20 292 1 2461 53 3 0 chr10 991706 992010 -139324755 + AluY SINE Alu 1 305 -6 799 95 112 0 chr10 992032 992148 -139324617 + AluSg SINE Alu 2 130 -180 296 54 0 0 chr10 992180 992217 -139324548 - Alu SINE Alu -9 291 255 489 111 0 0 chr10 992339 992411 -139324354 - AluS SINE Alu -236 73 2 1144 163 5 45 chr10 992432 992653 -139324112 + AluJb SINE Alu 99 310 -2 690 280 57 0 chr10 993998 994191 -139322574 - MER58A DNA MER1_type -15 209 6 976 225 86 47 chr10 996177 996537 -139320228 + MLT1A2 LTR MaLR 1 374 0 1814 251 116 21 chr10 996537 997209 -139319556 + MLT1A2-int LTR MaLR 1 736 -635 309 262 36 0 chr10 997329 997413 -139319352 + MLT1A2-int LTR MaLR 686 772 -963 1766 251 21 23 chr10 997472 997947 -139318818 + MLT1A2-int LTR MaLR 1262 1735 0 623 226 11 45 chr10 997955 998132 -139318633 + MLT1A2 LTR MaLR 9 179 -195 2284 74 3 3 chr10 998185 998483 -139318282 - AluSc SINE Alu -11 298 1 414 320 5 2 chr10 998510 998693 -139318072 + MLT1B LTR MaLR 190 374 0 1746 166 47 52 chr10 1001040 1001425 -139315340 - MLT1B LTR MaLR -7 383 1 312 304 97 32 chr10 1001586 1001803 -139314962 + L2 LINE L2 2945 3175 -138 1944 170 77 20 chr10 1002228 1002629 -139314136 - MSTA LTR MaLR 0 428 5 227 321 0 57 chr10 1002641 1002747 -139314018 + L2 LINE L2 3127 3226 -87 1342 230 88 65 chr10 1003936 1004571 -139312194 - MLT1E1 LTR MaLR 0 654 5 245 309 21 69 chr10 1005612 1005653 -139311112 + L2 LINE L2 2305 2346 -968 2405 45 0 0 chr10 1005653 1005944 -139310821 - AluY SINE Alu -20 291 1 245 309 21 69 chr10 1005944 1006090 -139310675 + L2 LINE L2 2346 2483 -831 198 0 0 0 chr10 1006370 1006392 -139310373 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 2075 103 0 0 chr10 1006395 1006676 -139310089 - AluSx SINE Alu -31 281 1 239 236 33 26 chr10 1007287 1007381 -139309384 - L1MC5 LINE L1 -10 7916 7679 656 271 73 50 chr10 1007930 1008270 -139308495 - L1MC4 LINE L1 -197 7845 7498 2034 67 63 25 chr10 1009303 1009588 -139307177 + AluSp SINE Alu 1 296 -17 1212 111 0 0 chr10 1011750 1011912 -139304853 - AluSg/x SINE Alu -2 310 149 12705 155 48 12 chr10 1011922 1013809 -139302956 + Tigger1 DNA MER2_type 15 2002 -416 2295 124 0 3 chr10 1013809 1014115 -139302650 - AluSx SINE Alu -7 305 1 12705 155 48 12 chr10 1014115 1014548 -139302217 + Tigger1 DNA MER2_type 2002 2418 0 322 359 0 0 chr10 1015871 1016013 -139300752 - L1PB4 LINE L1 -9 6147 6006 610 215 29 53 chr10 1016201 1016410 -139300355 - L1PB4 LINE L1 -135 6021 5818 1905 155 3 10 chr10 1016902 1017212 -139299553 - AluJb SINE Alu -4 308 1 246 224 20 0 chr10 1019624 1019673 -139297092 + L2 LINE L2 3259 3308 -5 1090 214 59 2 chr10 1023113 1023519 -139293246 - L1MB4 LINE L1 -6 6174 5698 1854 153 43 3 chr10 1074095 1074377 -139242388 + AluSx SINE Alu 1 293 -19 208 170 38 0 chr10 1076016 1076069 -139240696 + CT-rich Low_complexity Low_complexity 2 56 0 2148 118 17 0 chr10 1076069 1076358 -139240407 - AluSg SINE Alu -16 294 1 181 238 71 0 chr10 1077601 1077643 -139239122 + L2 LINE L2 92 136 -3178 186 294 96 75 chr10 1079013 1079159 -139237606 + MIR SINE MIR 58 206 -56 1387 159 142 3 chr10 1081771 1082073 -139234692 + L1PA16 LINE L1 5814 6157 -9 2056 104 47 24 chr10 1082098 1082396 -139234369 + AluSx SINE Alu 1 305 -7 264 182 0 18 chr10 1082396 1082442 -139234323 - MER58 DNA MER1_type -168 47 1 1721 88 4 9 chr10 1084282 1084510 -139232255 + AluY SINE Alu 79 305 -6 3083 207 56 41 chr10 1084510 1085470 -139231295 + L1MDa LINE L1 1741 2706 -3834 1050 163 6 0 chr10 1085472 1085668 -139231097 + AluJo SINE Alu 126 322 0 4341 282 64 25 chr10 1085672 1087450 -139229315 + L1MDa LINE L1 2714 4560 -1980 2596 229 74 14 chr10 1087554 1088454 -139228311 - L1MCa LINE L1 -4634 1792 748 276 80 21 0 chr10 1092257 1092321 -139224444 + L1MC1 LINE L1 5232 5296 -850 1047 101 0 0 chr10 1092321 1092460 -139224305 + AluY SINE Alu 167 305 -6 5864 142 13 25 chr10 1092460 1092739 -139224026 + L1MC1 LINE L1 5310 5591 -742 2225 127 42 23 chr10 1092739 1093093 -139223672 - THE1B LTR MaLR -2 362 2 5864 142 13 25 chr10 1093093 1093842 -139222923 + L1MC1 LINE L1 5591 6325 -8 325 228 79 44 chr10 1093886 1094000 -139222765 + L1MC4 LINE L1 7924 8041 -1 492 241 76 19 chr10 1094211 1094369 -139222396 - Charlie8 DNA MER1_type -2179 238 72 245 304 78 9 chr10 1095307 1095422 -139221343 + Charlie7 DNA MER1_type 1754 1876 -736 1092 256 46 3 chr10 1096032 1096399 -139220366 + L1ME1 LINE L1 3045 3427 -2719 650 216 63 11 chr10 1096718 1096908 -139219857 - L1MCa LINE L1 -6211 215 16 * 1343 241 73 27 chr10 1096906 1097434 -139219331 + L1ME1 LINE L1 5550 6122 -44 280 267 30 30 chr10 1097356 1097491 -139219274 + L1MA10 LINE L1 6200 6334 0 * 390 248 8 48 chr10 1097764 1097889 -139218876 + MARNA DNA Mariner 122 241 -345 1796 122 0 4 chr10 1098371 1098626 -139218139 + AluJb SINE Alu 59 312 0 268 245 32 0 chr10 1098745 1098839 -139217926 - L1ME3A LINE L1 -219 5951 5855 385 295 66 24 chr10 1098994 1099160 -139217605 - MER5A DNA MER1_type -1 188 16 294 296 157 26 chr10 1099195 1099618 -139217147 - L1ME3A LINE L1 -542 5628 5138 371 238 6 0 chr10 1100364 1100536 -139216229 + CT-rich Low_complexity Low_complexity 2 174 0 257 122 67 22 chr10 1100552 1100642 -139216123 + (TCTCTG)n Simple_repeat Simple_repeat 2 95 0 198 204 45 0 chr10 1102593 1102637 -139214128 - MIR3 SINE MIR -52 156 111 665 263 148 31 chr10 1102891 1103343 -139213422 + MLT1D LTR MaLR 1 505 0 2453 84 7 0 chr10 1105573 1105882 -139210883 + AluSx SINE Alu 1 311 -1 236 262 0 0 chr10 1108112 1108173 -139208592 - MLT1J LTR MaLR -3 508 448 259 332 40 60 chr10 1108298 1108497 -139208268 - MLT1J LTR MaLR -60 451 257 406 238 90 0 chr10 1108772 1108894 -139207871 + LTR16C LTR ERVL 359 491 0 2409 65 7 3 chr10 1109398 1109688 -139207077 - AluSc SINE Alu -11 298 8 350 307 84 12 chr10 1111938 1112104 -139204661 + MIR SINE MIR 78 255 -7 453 246 48 0 chr10 1112290 1112416 -139204349 - L1MA6 LINE L1 0 6300 6169 230 156 11 113 chr10 1112422 1112608 -139204157 + (CAT)n Simple_repeat Simple_repeat 2 168 0 2304 189 90 63 chr10 1112973 1113593 -139203172 - L1MA6 LINE L1 -106 6194 5558 341 294 88 19 chr10 1113594 1113754 -139203011 - MIR3 SINE MIR -7 201 31 23822 34 4 1 chr10 1115684 1118719 -139198046 - L1P LINE L1 -1044 5102 2058 225 234 0 0 chr10 1118772 1118836 -139197929 + GA-rich Low_complexity Low_complexity 2 65 0 197 379 0 0 chr10 1122318 1122421 -139194344 - MER5A DNA MER1_type -3 186 84 234 301 18 35 chr10 1124435 1124548 -139192217 + L3b LINE CR1 1326 1436 -147 1370 180 20 108 chr10 1124900 1125300 -139191465 - MLT1A1 LTR MaLR 0 365 1 2820 133 17 2 chr10 1125361 1125829 -139190936 - L1MC1 LINE L1 -179 6154 5680 418 296 33 19 chr10 1125833 1126046 -139190719 - L1 LINE L1 -1127 5019 4804 1599 150 8 0 chr10 1126203 1126469 -139190296 - MSTB2 LTR MaLR 0 457 190 1095 180 57 12 chr10 1126465 1126710 -139190055 - MSTB2 LTR MaLR -201 256 1 * 528 363 39 13 chr10 1126756 1127216 -139189549 - L1 LINE L1 -1525 4621 4150 258 32 0 0 chr10 1127298 1127329 -139189436 + (TG)n Simple_repeat Simple_repeat 1 31 0 1758 171 0 7 chr10 1127495 1127788 -139188977 - AluJo SINE Alu -21 291 1 248 312 56 0 chr10 1128752 1128877 -139187888 + LTR16A1 LTR ERVL 260 391 -66 11465 25 7 2 chr10 1129436 1131606 -139185159 + L1PA4 LINE L1 3973 6146 -9 2132 102 17 7 chr10 1134322 1134615 -139182150 - AluSq SINE Alu -17 296 1 324 230 27 14 chr10 1136914 1137062 -139179703 + (CA)n Simple_repeat Simple_repeat 1 150 0 338 268 27 18 chr10 1137084 1137196 -139179569 + (CA)n Simple_repeat Simple_repeat 1 113 0 312 245 132 19 chr10 1138248 1138354 -139178411 + L2 LINE L2 3180 3297 -16 1625 157 3 101 chr10 1139207 1139545 -139177220 - AluJb SINE Alu -7 305 1 2458 84 3 0 chr10 1140482 1140781 -139175984 + AluY SINE Alu 1 300 -11 2220 95 3 3 chr10 1142588 1142883 -139173882 - AluSc SINE Alu -14 295 1 1112 75 0 0 chr10 1143502 1143635 -139173130 + AluJb SINE Alu 7 139 -173 288 333 56 0 chr10 1150119 1150227 -139166538 + MIR SINE MIR 57 170 -92 198 0 0 0 chr10 1151182 1151204 -139165561 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 607 271 29 6 chr10 1151264 1151434 -139165331 - MER45A DNA AcHobo -4 174 1 226 227 0 0 chr10 1154273 1154317 -139162448 + T-rich Low_complexity Low_complexity 4 47 0 760 234 70 42 chr10 1156156 1156593 -139160172 - MLT1D LTR MaLR 0 467 5 193 300 78 0 chr10 1157523 1157613 -139159152 + MIR SINE MIR 17 113 -149 2093 91 39 11 chr10 1158361 1158647 -139158118 + AluY SINE Alu 1 294 -17 364 307 108 16 chr10 1159312 1159745 -139157020 - L1MCa LINE L1 -4656 1875 1246 1419 249 8 32 chr10 1159788 1160162 -139156603 + MLT2D LTR ERVL 1 365 -49 376 42 56 14 chr10 1160166 1160238 -139156527 + (TCTA)n Simple_repeat Simple_repeat 2 76 0 299 289 76 5 chr10 1160239 1160436 -139156329 - L1MCa LINE L1 -5014 1402 1192 192 40 0 0 chr10 1161081 1161106 -139155659 + (T)n Simple_repeat Simple_repeat 1 25 0 439 289 179 10 chr10 1161771 1162072 -139154693 + L2 LINE L2 2960 3311 -2 28 48 0 0 chr10 1162235 1162277 -139154488 + AT_rich Low_complexity Low_complexity 1 42 0 826 152 0 0 chr10 1162459 1162591 -139154174 - FLAM_C SINE Alu 0 133 2 273 245 0 0 chr10 1165303 1165356 -139151409 + (CGGG)n Simple_repeat Simple_repeat 4 56 0 883 141 0 22 chr10 1167798 1167933 -139148832 - AluJo/FLAM SINE Alu -170 132 1 415 149 0 103 chr10 1167933 1168031 -139148734 - AluJ/FRAM SINE Alu -7 305 217 * 825 158 0 22 chr10 1168029 1168168 -139148597 - AluJo SINE Alu -175 137 2 301 294 100 6 chr10 1169237 1169397 -139147368 - MER5B DNA MER1_type -3 175 1 707 224 38 6 chr10 1169508 1169691 -139147074 + MER5A DNA MER1_type 1 189 0 258 297 15 123 chr10 1169961 1170156 -139146609 + L1MC/D LINE L1 5611 5784 -2024 445 281 26 0 chr10 1171301 1171454 -139145311 + MLT1A1 LTR MaLR 153 309 -56 2098 88 7 3 chr10 1172755 1173038 -139143727 + AluSx SINE Alu 1 284 -28 327 234 105 16 chr10 1173932 1174056 -139142709 - MLT1C LTR MaLR -6 461 327 180 320 172 8 chr10 1174426 1174548 -139142217 - L2 LINE L2 -20 3252 3111 209 264 22 22 chr10 1174938 1175116 -139141649 + (CACCAT)n Simple_repeat Simple_repeat 1 178 0 288 260 14 14 chr10 1175240 1175386 -139141379 + (CACCAT)n Simple_repeat Simple_repeat 3 148 0 188 33 0 33 chr10 1176766 1176796 -139139969 + (TCCC)n Simple_repeat Simple_repeat 2 30 0 22908 47 10 3 chr10 1176914 1179860 -139136905 - L1P LINE L1 -3180 2966 1 192 77 0 0 chr10 1180235 1180261 -139136504 + (ATG)n Simple_repeat Simple_repeat 1 26 0 370 309 0 4 chr10 1181947 1182187 -139134578 + (TG)n Simple_repeat Simple_repeat 1 238 0 286 90 56 34 chr10 1184431 1184520 -139132245 + (CA)n Simple_repeat Simple_repeat 1 91 0 252 149 75 15 chr10 1184633 1184767 -139131998 + (TG)n Simple_repeat Simple_repeat 1 142 0 321 119 73 26 chr10 1184803 1184954 -139131811 + (TG)n Simple_repeat Simple_repeat 1 158 0 181 159 65 41 chr10 1184929 1185099 -139131666 + (GTGTG)n Simple_repeat Simple_repeat 2 175 0 * 353 132 72 24 chr10 1185084 1185251 -139131514 + (TG)n Simple_repeat Simple_repeat 1 175 0 7660 19 14 0 chr10 1185803 1187323 -139129442 + L1PA2 LINE L1 4659 6174 0 7524 32 7 7 chr10 1187323 1188293 -139128472 + L1PA4 LINE L1 5177 6146 -9 1057 141 0 22 chr10 1189286 1189653 -139127112 + (CACCAT)n Simple_repeat Simple_repeat 1 360 0 279 0 0 0 chr10 1190287 1190318 -139126447 + (CA)n Simple_repeat Simple_repeat 2 32 0 201 74 0 0 chr10 1191852 1191879 -139124886 + (TCCA)n Simple_repeat Simple_repeat 2 28 0 21317 31 6 3 chr10 1192037 1195394 -139121371 + L1PA4 LINE L1 2644 6007 -148 181 116 23 23 chr10 1195577 1195620 -139121145 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 237 349 47 28 chr10 1195621 1195727 -139121038 - L2 LINE L2 -19 3253 3146 1386 219 103 25 chr10 1195816 1196214 -139120551 + MER63B DNA MER1_type 4 432 -4 456 161 0 72 chr10 1197355 1197548 -139119217 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 483 309 69 56 chr10 1201528 1201832 -139114933 - MER58B DNA MER1_type -8 333 26 362 363 32 0 chr10 1201840 1201997 -139114768 + MIR SINE MIR 46 207 -55 2271 103 0 0 chr10 1202255 1202565 -139114200 - AluSx SINE Alu -2 310 1 483 309 69 56 chr10 1204212 1204516 -139112249 - MER58B DNA MER1_type -8 333 26 362 363 32 0 chr10 1204524 1204681 -139112084 + MIR SINE MIR 46 207 -55 800 190 98 0 chr10 1204939 1205102 -139111663 - AluSg/x SINE Alu -2 308 130 2980 201 80 7 chr10 1205102 1205988 -139110777 + L1MB3 LINE L1 5152 6100 -83 1993 125 0 55 chr10 1206485 1206812 -139109953 - AluSx SINE Alu -3 309 1 1596 176 0 14 chr10 1206960 1207255 -139109510 - AluJo SINE Alu -11 301 11 2149 114 13 0 chr10 1207259 1207566 -139109199 - AluSx SINE Alu -1 311 1 231 366 0 38 chr10 1208860 1209043 -139107722 + C-rich Low_complexity Low_complexity 4 179 0 1854 138 43 0 chr10 1209771 1210053 -139106712 + AluSx SINE Alu 1 294 -18 19095 49 2 4 chr10 1214108 1217301 -139099464 - L1PA4 LINE L1 -1 6154 2969 186 294 96 75 chr10 1219338 1219484 -139097281 + MIR SINE MIR 58 206 -56 421 317 45 40 chr10 1221136 1221360 -139095405 + HAL1 LINE L1 977 1201 -1306 304 308 81 5 chr10 1221568 1221789 -139094976 + HAL1 LINE L1 1512 1749 -758 268 255 179 33 chr10 1222503 1222715 -139094050 + HAL1 LINE L1 2265 2507 0 213 240 40 0 chr10 1223449 1223499 -139093266 + C-rich Low_complexity Low_complexity 1 52 0 317 295 67 0 chr10 1223675 1223780 -139092985 + L2 LINE L2 3184 3295 -18 667 293 29 3 chr10 1223791 1223995 -139092770 - MIR SINE MIR 0 262 55 285 211 18 26 chr10 1225906 1226020 -139090745 + (CA)n Simple_repeat Simple_repeat 1 113 0 474 296 107 26 chr10 1226204 1226437 -139090328 + MIR SINE MIR 7 258 -4 619 249 107 29 chr10 1227152 1227503 -139089262 - MLT1C LTR MaLR -7 460 89 939 203 0 0 chr10 1227618 1227781 -139088984 - FRAM SINE Alu -3 163 1 228 228 20 119 chr10 1228358 1228459 -139088306 - L2 LINE L2 -188 3084 2994 7616 33 48 3 chr10 1229864 1230927 -139085838 - L1PA4 LINE L1 -1 6154 5077 10604 40 2 0 chr10 1230927 1232285 -139084480 + L1P LINE L1 2453 3813 -2333 189 0 0 0 chr10 1232289 1232310 -139084455 + (TTCC)n Simple_repeat Simple_repeat 1 21 0 2118 124 0 34 chr10 1232314 1232637 -139084128 - AluSx SINE Alu 0 312 1 1575 127 137 13 chr10 1232650 1232964 -139083801 - L1PA16 LINE L1 0 6166 5814 742 238 25 20 chr10 1233423 1233625 -139083140 - MLT1B LTR MaLR 0 390 188 1783 168 7 7 chr10 1233661 1233972 -139082793 - AluJo SINE Alu 0 311 1 232 235 12 49 chr10 1233974 1234055 -139082710 - MLT1B LTR MaLR -207 167 90 1362 242 3 20 chr10 1234059 1234402 -139082363 + MLT1C-int LTR MaLR 1399 1735 0 763 205 6 23 chr10 1234461 1234632 -139082133 - MLT1A2 LTR MaLR -202 172 5 281 324 9 9 chr10 1237651 1237762 -139079003 - MIR SINE MIR -15 247 137 327 283 35 18 chr10 1238445 1238558 -139078207 - L2 LINE L2 0 3313 3199 270 318 83 23 chr10 1238897 1239029 -139077736 - MIR SINE MIR -64 198 59 220 359 58 26 chr10 1240927 1241083 -139075682 + MIR SINE MIR 6 166 -96 1369 224 99 0 chr10 1241618 1241931 -139074834 - L1MA7 LINE L1 0 6291 5948 491 370 34 13 chr10 1242708 1242943 -139073822 - MIR SINE MIR 0 262 23 3995 112 32 2 chr10 1243230 1243821 -139072944 + MER4B LTR ERV1 1 609 -1 242 347 13 73 chr10 1244795 1244945 -139071820 - MIR SINE MIR -115 147 7 721 132 0 16 chr10 1246510 1246631 -139070134 - FLAM_C SINE Alu -24 119 1 597 187 18 26 chr10 1247309 1247535 -139069230 + GA-rich Low_complexity Low_complexity 1 224 0 639 163 22 22 chr10 1247705 1247883 -139068882 + GA-rich Low_complexity Low_complexity 3 180 0 364 298 60 12 chr10 1249330 1249498 -139067267 + MER5B DNA MER1_type 3 178 0 418 228 94 58 chr10 1251561 1251732 -139065033 + MLT1C LTR MaLR 6 182 -285 1259 234 88 38 chr10 1251794 1252269 -139064496 + LTR55 LTR ERV 34 532 -16 461 260 56 5 chr10 1252279 1252523 -139064242 + MLT1C LTR MaLR 192 373 -17 787 270 40 40 chr10 1253233 1253533 -139063232 - AluSq SINE Alu 0 313 14 418 225 69 27 chr10 1254766 1254917 -139061848 - L1P5 LINE L1 -460 5661 5526 1760 165 7 14 chr10 1256309 1256606 -139060159 - AluJo SINE Alu -11 301 7 207 231 0 58 chr10 1256814 1256866 -139059899 + G-rich Low_complexity Low_complexity 1 49 0 3313 251 88 17 chr10 1258209 1259976 -139056789 + L1MD2 LINE L1 4448 6349 -10 181 281 88 0 chr10 1261438 1261495 -139055270 + MIR SINE MIR 62 123 -85 224 237 17 0 chr10 1261525 1261584 -139055181 + GA-rich Low_complexity Low_complexity 1 60 0 1843 173 3 22 chr10 1263636 1263949 -139052816 + AluJb SINE Alu 1 307 -5 228 67 0 0 chr10 1264857 1264887 -139051878 + (T)n Simple_repeat Simple_repeat 1 30 0 594 259 11 52 chr10 1265381 1265555 -139051210 + L1MB7 LINE L1 3969 4135 -2011 3651 185 68 42 chr10 1265566 1266688 -139050077 + L1MB7 LINE L1 5032 6184 0 242 192 247 0 chr10 1266699 1266772 -139049993 - Charlie7 DNA MER1_type -2516 96 6 1576 188 3 41 chr10 1267050 1267370 -139049395 + AluJb SINE Alu 2 309 -3 195 178 111 0 chr10 1267590 1267635 -139049130 + L3 LINE CR1 1525 1574 -3 227 307 207 27 chr10 1268254 1268404 -139048361 - MIR SINE MIR -84 178 2 231 253 25 13 chr10 1270242 1270321 -139046444 + (TATATG)n Simple_repeat Simple_repeat 4 83 0 228 310 129 9 chr10 1270721 1270837 -139045928 - MER5A DNA MER1_type -3 186 57 220 236 127 73 chr10 1270878 1270988 -139045777 + L2 LINE L2 3154 3269 -3 418 225 81 12 chr10 1271288 1271448 -139045317 + MER76 LTR ERV 1 171 -517 200 222 0 0 chr10 1272320 1272356 -139044409 - L2 LINE L2 -1 3271 3236 222 174 0 0 chr10 1273317 1273363 -139043402 + CT-rich Low_complexity Low_complexity 3 48 0 1099 190 113 12 chr10 1273525 1273772 -139042993 - L1MC1 LINE L1 0 6333 6062 43203 34 23 10 chr10 1273775 1279851 -139036914 + L1PA2 LINE L1 3 6154 -1 3304 170 66 2 chr10 1279864 1280482 -139036283 - L1MC1 LINE L1 -261 6072 5415 238 305 12 12 chr10 1281878 1281960 -139034805 - L2 LINE L2 0 3313 3232 224 292 15 0 chr10 1282311 1282376 -139034389 - L2 LINE L2 -4 3309 3244 257 268 12 49 chr10 1282867 1282949 -139033816 + MIR SINE MIR 40 118 -90 297 310 86 0 chr10 1284497 1284649 -139032116 - MIR SINE MIR -68 140 17 240 100 0 0 chr10 1286325 1286365 -139030400 + (TCC)n Simple_repeat Simple_repeat 3 42 0 22 0 0 0 chr10 1289121 1289143 -139027622 + AT_rich Low_complexity Low_complexity 1 22 0 1042 224 103 24 chr10 1340614 1340944 -138975821 + MLT1A2 LTR MaLR 19 374 0 894 144 7 0 chr10 1341206 1341345 -138975420 + L1P LINE L1 4882 5021 -1125 269 270 95 40 chr10 1341974 1342100 -138974665 + MIR SINE MIR 59 191 -71 10548 37 2 0 chr10 1342765 1344046 -138972719 - L1P LINE L1 -2361 3785 2503 194 326 90 35 chr10 1344146 1344246 -138972519 + MIR SINE MIR 107 219 -43 2254 118 0 0 chr10 1344246 1344551 -138972214 + AluSx SINE Alu 1 305 -7 194 326 90 35 chr10 1344551 1344594 -138972171 + MIR SINE MIR 219 258 -4 1062 203 50 5 chr10 1345296 1345518 -138971247 + L1PA15-16 LINE L1 1453 1684 -5165 254 176 132 0 chr10 1345520 1345588 -138971177 + polypurine Low_complexity Low_complexity 3 79 0 4423 134 31 15 chr10 1345588 1346369 -138970396 + L1PA15-16 LINE L1 1617 2409 -4440 2646 221 20 11 chr10 1346469 1347202 -138969563 + L1 LINE L1 3506 4245 -2604 31 0 0 0 chr10 1348914 1348945 -138967820 + AT_rich Low_complexity Low_complexity 1 31 0 205 296 0 0 chr10 1349072 1349116 -138967649 - L2 LINE L2 -8 3305 3262 197 211 96 19 chr10 1349080 1349132 -138967633 - MIR SINE MIR -10 252 197 * 257 189 176 0 chr10 1349303 1349377 -138967388 + MLT1J LTR MaLR 419 505 -6 447 137 0 27 chr10 1349980 1350053 -138966712 - 5S rRNA rRNA -20 101 31 384 265 17 87 chr10 1350560 1350790 -138965975 - L1ME4a LINE L1 -12 6109 5896 987 176 18 0 chr10 1351933 1352098 -138964667 + MER68 LTR ERV1 395 562 0 461 323 5 5 chr10 1352207 1352405 -138964360 + L1M3 LINE L1 2703 2900 -3246 277 167 0 0 chr10 1352408 1352450 -138964315 - Tigger5 DNA MER2_type 0 2323 2282 * 309 237 17 0 chr10 1352448 1352507 -138964258 + Tigger5 DNA MER2_type 2259 2318 -5 265 182 227 30 chr10 1352507 1352573 -138964192 - Tigger5 DNA MER2_type -2243 80 2 344 178 0 0 chr10 1352575 1352648 -138964117 + L1M3 LINE L1 2904 2976 -3170 226 211 0 39 chr10 1352650 1352702 -138964063 + L1M4 LINE L1 435 484 -6091 443 250 91 40 chr10 1352732 1352908 -138963857 + L1M3c LINE L1 64 248 -6294 1333 222 64 12 chr10 1353073 1353411 -138963354 + L1M3 LINE L1 5231 5580 -600 22 0 0 0 chr10 1354943 1354965 -138961800 + AT_rich Low_complexity Low_complexity 1 22 0 480 331 6 0 chr10 1355242 1355420 -138961345 + (CA)n Simple_repeat Simple_repeat 2 180 0 2430 92 0 0 chr10 1356087 1356392 -138960373 - AluSx SINE Alu -7 305 1 3947 144 58 5 chr10 1356645 1357297 -138959468 + L1PA16 LINE L1 5470 6156 -10 534 201 10 10 chr10 1358062 1358357 -138958408 + (TG)n Simple_repeat Simple_repeat 1 295 0 189 147 0 0 chr10 1359503 1359537 -138957228 + (TC)n Simple_repeat Simple_repeat 1 34 0 213 193 18 18 chr10 1360096 1360153 -138956612 + (TA)n Simple_repeat Simple_repeat 2 58 0 359 330 54 15 chr10 1361486 1361689 -138955076 + L1M3c LINE L1 652 862 -5772 358 237 26 105 chr10 1361936 1362088 -138954677 + L1M4 LINE L1 2088 2227 -4598 219 36 0 0 chr10 1362111 1362139 -138954626 + (TG)n Simple_repeat Simple_repeat 2 29 0 * 342 0 0 0 chr10 1362138 1362176 -138954589 + (TA)n Simple_repeat Simple_repeat 1 38 0 337 291 63 63 chr10 1362438 1362644 -138954121 + L1M3c LINE L1 881 1086 -5479 1857 231 160 45 chr10 1362772 1363572 -138953193 + L1M4c LINE L1 542 1794 -4519 3620 244 33 11 chr10 1363672 1364719 -138952046 + L1P LINE L1 2639 3708 -2438 8574 78 13 0 chr10 1364819 1365955 -138950810 - L1P LINE L1 -4660 1486 336 1754 176 65 40 chr10 1366055 1366425 -138950340 + L1MC1 LINE L1 5950 6328 -5 602 152 27 0 chr10 1366430 1366542 -138950223 + L1MB7 LINE L1 6051 6165 -19 2935 150 44 22 chr10 1366562 1366889 -138949876 - L1MD2 LINE L1 -423 5936 5591 1691 160 35 11 chr10 1366889 1367176 -138949589 - AluJo SINE Alu -18 294 1 2935 150 44 22 chr10 1367176 1367396 -138949369 - L1MD2 LINE L1 -768 5591 5377 518 224 33 33 chr10 1367406 1367558 -138949207 + L1MC5 LINE L1 7314 7465 -496 5808 167 40 3 chr10 1367688 1368820 -138947945 - L1PBa LINE L1 -4453 2410 1093 2800 184 71 17 chr10 1368821 1369413 -138947352 - L1PBa LINE L1 -5815 1048 425 21 36 0 0 chr10 1369688 1369716 -138947049 + AT_rich Low_complexity Low_complexity 1 28 0 5839 163 38 10 chr10 1371208 1372434 -138944331 + L1PA12 LINE L1 225 2004 -5577 999 159 12 0 chr10 1372432 1372595 -138944170 + L1PA13 LINE L1 339 503 -6284 * 21 36 0 0 chr10 1372855 1372883 -138943882 + AT_rich Low_complexity Low_complexity 1 28 0 210 315 0 14 chr10 1373156 1373229 -138943536 + (CATATA)n Simple_repeat Simple_repeat 5 76 0 247 191 0 0 chr10 1373678 1373720 -138943045 + MIR SINE MIR 111 152 -56 1290 139 43 9 chr10 1374531 1374761 -138942004 + MLT1B LTR MaLR 151 388 -2 22 56 0 0 chr10 1375004 1375040 -138941725 + AT_rich Low_complexity Low_complexity 1 36 0 2324 88 16 0 chr10 1377556 1377861 -138938904 + AluSg SINE Alu 1 310 0 4395 183 44 35 chr10 1379247 1380291 -138936474 - L1 LINE L1 -1279 5049 3997 1477 234 61 16 chr10 1380397 1380842 -138935923 - L1ME2 LINE L1 -142 6022 5558 2954 137 41 2 chr10 1380844 1381327 -138935438 - L1PA16 LINE L1 -3 6163 5662 2195 124 0 3 chr10 1381346 1381652 -138935113 - AluSx SINE Alu -7 305 1 906 287 123 21 chr10 1381653 1382538 -138934227 - L1ME2 LINE L1 -1890 4256 3261 5318 184 23 32 chr10 1382656 1384174 -138932591 - L1 LINE L1 -4296 2032 3 186 224 0 0 chr10 1384521 1384570 -138932195 + (TG)n Simple_repeat Simple_repeat 2 50 0 356 327 92 0 chr10 1384744 1384897 -138931868 - MIR SINE MIR -66 196 30 258 241 74 37 chr10 1384966 1385074 -138931691 - L1MA10 LINE L1 0 6334 6223 936 187 7 1 chr10 1385123 1385308 -138931457 - L1ME1 LINE L1 -290 5882 5693 4680 164 38 14 chr10 1385309 1386340 -138930425 + L1MB2 LINE L1 5105 6164 -7 247 169 0 123 chr10 1386345 1386410 -138930355 + L1ME3A LINE L1 5962 6018 -152 418 93 0 0 chr10 1386984 1387038 -138929727 - Alu SINE Alu -250 60 7 463 186 44 18 chr10 1387499 1387612 -138929153 + MER4C LTR ERV1 4 119 -346 226 224 0 0 chr10 1387677 1387726 -138929039 + MER4A LTR ERV1 136 184 -480 399 217 59 129 chr10 1387758 1388146 -138928619 + MER4A LTR ERV1 189 656 -43 4763 187 5 32 chr10 1388766 1389960 -138926805 + L1P4 LINE L1 4316 5472 -694 442 319 44 28 chr10 1389955 1390568 -138926197 + L1ME LINE L1 4934 5557 -605 * 268 206 124 84 chr10 1392041 1392183 -138924582 - MLT1L LTR MaLR -304 207 49 1073 229 47 0 chr10 1392183 1392397 -138924368 - MER58A DNA MER1_type 0 224 1 268 206 124 84 chr10 1392397 1392446 -138924319 - MLT1L LTR MaLR -462 49 3 1902 76 4 0 chr10 1396785 1397035 -138919730 - L1PA8 LINE L1 -3 6169 5919 8273 163 11 12 chr10 1397135 1398149 -138918616 - L1P LINE L1 -1953 4193 3179 2352 93 6 6 chr10 1398149 1398460 -138918305 - AluY SINE Alu 0 311 1 8273 163 11 12 chr10 1398460 1398926 -138917839 - L1P LINE L1 -2967 3179 2714 1764 117 0 0 chr10 1398925 1399164 -138917601 + L1P LINE L1 1 239 -5907 * 312 250 77 0 chr10 1399265 1399369 -138917396 - LTR43 LTR ERV1 -479 123 12 475 329 103 16 chr10 1399459 1399906 -138916859 - L1ME1 LINE L1 -4 6162 5677 849 245 24 21 chr10 1400248 1400611 -138916154 - L1ME1 LINE L1 -782 5364 5155 251 106 0 21 chr10 1401010 1401057 -138915708 + Alu SINE Alu 263 308 0 5307 141 12 15 chr10 1401057 1401926 -138914839 + L1PA15 LINE L1 5297 6165 0 905 240 115 13 chr10 1401937 1402249 -138914516 - L1ME1 LINE L1 -3600 2546 2203 3392 240 80 21 chr10 1402360 1403585 -138913180 - L1 LINE L1 -2550 3596 2300 1801 163 38 20 chr10 1403586 1403930 -138912835 + MER65A LTR ERV1 1 350 -95 3249 123 7 2 chr10 1403932 1404395 -138912370 + HSMAR1 DNA Mariner 27 491 -796 265 345 18 9 chr10 1404495 1404608 -138912157 - L2 LINE L2 -20 3293 3180 238 313 56 56 chr10 1405674 1405818 -138910947 - MIR SINE MIR -72 190 47 252 257 68 0 chr10 1406176 1406250 -138910515 + L1MA9 LINE L1 6057 6135 -177 786 207 112 90 chr10 1409701 1410058 -138906707 + MLT1A1 LTR MaLR 1 365 0 7176 220 113 9 chr10 1412326 1414416 -138902349 - L1PA13 LINE L1 -3979 2818 499 760 100 0 0 chr10 1414416 1414516 -138902249 + THE1C LTR MaLR 1 100 -275 6432 136 30 9 chr10 1414991 1417213 -138899552 - L1PA14 LINE L1 0 6161 3898 225 0 0 0 chr10 1418053 1418078 -138898687 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 561 167 0 0 chr10 1418900 1419002 -138897763 + (TCCA)n Simple_repeat Simple_repeat 4 105 0 8605 204 61 16 chr10 1419108 1420626 -138896139 + L1M1 LINE L1 3344 4793 -2772 659 232 8 0 chr10 1420626 1420751 -138896014 + FLAM_A SINE Alu 2 127 -6 8605 204 61 16 chr10 1420751 1422053 -138894712 + L1M1 LINE L1 4793 6418 -1147 792 77 19 0 chr10 1422049 1422153 -138894612 + L1PA12 LINE L1 1 106 -7475 * 279 29 0 0 chr10 1422153 1422188 -138894577 - MADE1 DNA Mariner -34 46 12 246 215 115 110 chr10 1422646 1422837 -138893928 - MLT1J LTR MaLR -112 399 208 5617 205 137 49 chr10 1422843 1424708 -138892057 - L1MCa LINE L1 -4392 2034 6 382 216 11 0 chr10 1424686 1424774 -138891991 - L1M LINE L1 -766 5688 5600 * 2410 150 50 43 chr10 1424874 1425553 -138891212 - L1M4 LINE L1 -401 5777 5091 977 226 35 42 chr10 1425833 1426120 -138890645 - L1ME1 LINE L1 -18 6148 5864 2096 148 77 0 chr10 1426126 1426464 -138890301 + THE1B LTR MaLR 1 364 0 4990 90 3 1 chr10 1426464 1427128 -138889637 + THE1B-int LTR MaLR 1 665 -915 362 73 0 0 chr10 1427109 1427164 -138889601 + THE1B-int LTR MaLR 1521 1575 -5 * 191 311 49 0 chr10 1428204 1428265 -138888500 - L2 LINE L2 -8 3264 3201 247 292 109 58 chr10 1429477 1429614 -138887151 - L2 LINE L2 -1 3271 3128 299 380 0 0 chr10 1429735 1429864 -138886901 + (TGAG)n Simple_repeat Simple_repeat 4 132 0 1574 170 71 3 chr10 1432037 1432360 -138884405 - MLT1B LTR MaLR -38 352 8 21 36 0 0 chr10 1432833 1432861 -138883904 + AT_rich Low_complexity Low_complexity 1 28 0 304 271 157 52 chr10 1434173 1434383 -138882382 - L1M2 LINE L1 -5598 1251 1020 12610 34 3 2 chr10 1435829 1438036 -138878729 + L1PA4 LINE L1 3880 6090 -65 641 136 14 27 chr10 1438149 1438296 -138878469 + (TCCA)n Simple_repeat Simple_repeat 2 146 0 765 157 11 11 chr10 1438338 1438516 -138878249 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 295 252 0 103 chr10 1439153 1439260 -138877505 + MIR SINE MIR 89 184 -78 407 329 110 0 chr10 1439370 1439516 -138877249 - MIR SINE MIR -57 205 44 398 295 53 27 chr10 1439541 1439781 -138876984 + MIR SINE MIR 12 256 -6 337 301 39 0 chr10 1440246 1440349 -138876416 + MIR SINE MIR 88 194 -68 1154 163 15 0 chr10 1440553 1440756 -138876009 - L1PA15 LINE L1 -7 6158 5953 1686 162 14 0 chr10 1440857 1441141 -138875624 - MSTA LTR MaLR -140 288 1 994 162 81 0 chr10 1441304 1441501 -138875264 + AluJb SINE Alu 55 267 -45 318 286 109 8 chr10 1443234 1443353 -138873412 - MER5A DNA MER1_type -52 137 7 2070 126 0 0 chr10 1443562 1443863 -138872902 + AluSg SINE Alu 1 301 -9 5013 181 15 30 chr10 1445374 1445398 -138871367 - L1MC1 LINE L1 -6 6327 6304 3301 110 31 90 chr10 1445398 1445545 -138871220 - MER4A LTR ERV1 0 600 446 2201 75 0 0 chr10 1445545 1445850 -138870915 - AluY SINE Alu 0 307 3 3301 110 31 90 chr10 1445850 1446336 -138870429 - MER4A LTR ERV1 -154 446 3 5013 181 15 30 chr10 1446336 1447336 -138869429 - L1MC1 LINE L1 -29 6304 5319 892 264 70 98 chr10 1448563 1449105 -138867660 + MER77 LTR ERV1 79 605 0 419 210 10 0 chr10 1449641 1449741 -138867024 + CT-rich Low_complexity Low_complexity 1 101 0 270 284 0 34 chr10 1450456 1450544 -138866221 - L2 LINE L2 -3 3269 3185 209 57 29 0 chr10 1452162 1452197 -138864568 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1174 22 0 0 chr10 1453553 1453687 -138863078 + L1PA3 LINE L1 6022 6155 0 311 233 89 22 chr10 1454546 1454636 -138862129 - MIR SINE MIR -131 131 36 250 246 72 14 chr10 1454698 1454767 -138861998 - L2 LINE L2 -16 3297 3225 279 319 11 33 chr10 1455799 1455890 -138860875 + L2 LINE L2 3221 3309 -4 849 254 90 3 chr10 1456022 1456310 -138860455 + MER33 DNA MER1_type 9 321 -3 189 0 0 0 chr10 1458245 1458266 -138858499 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 267 224 149 0 chr10 1459348 1459415 -138857350 + Charlie8 DNA MER1_type 118 194 -2223 465 110 0 0 chr10 1459926 1459999 -138856766 + (CA)n Simple_repeat Simple_repeat 2 74 0 202 397 127 15 chr10 1460659 1460933 -138855832 - L2 LINE L2 0 3272 2937 1642 194 0 19 chr10 1460933 1461248 -138855517 - AluJb SINE Alu -3 309 1 202 397 127 15 chr10 1461248 1461376 -138855389 - L2 LINE L2 -335 2937 2825 7242 114 67 8 chr10 1462331 1463493 -138853272 - Tigger3b DNA MER2_type 0 1231 1 617 258 30 6 chr10 1464173 1464340 -138852425 + MER3 DNA MER1_type 35 205 -4 304 200 55 0 chr10 1466088 1466198 -138850567 + (CTGTG)n Simple_repeat Simple_repeat 4 119 0 251 261 15 0 chr10 1467524 1467589 -138849176 + L2 LINE L2 3247 3312 -1 296 320 137 23 chr10 1468735 1468910 -138847855 + MIR3 SINE MIR 6 200 -8 21 57 0 0 chr10 1469604 1469639 -138847126 + AT_rich Low_complexity Low_complexity 1 35 0 198 71 0 0 chr10 1470699 1470727 -138846038 + (GA)n Simple_repeat Simple_repeat 1 28 0 1976 210 167 4 chr10 1470974 1471532 -138845233 + L1MB3 LINE L1 5534 6182 -1 522 324 0 0 chr10 1473503 1473922 -138842843 + (TATG)n Simple_repeat Simple_repeat 1 419 0 505 302 0 0 chr10 1473939 1474212 -138842553 + (TAGG)n Simple_repeat Simple_repeat 1 273 0 1818 120 31 51 chr10 1475108 1475276 -138841489 + L1PA13 LINE L1 5780 5950 -213 1988 134 10 0 chr10 1475276 1475568 -138841197 + AluSq SINE Alu 1 295 -18 1818 120 31 51 chr10 1475568 1475749 -138841016 + L1PA13 LINE L1 5950 6122 -41 261 189 0 38 chr10 1475764 1475817 -138840948 + L1PA13 LINE L1 6072 6122 -41 261 189 0 38 chr10 1475798 1475851 -138840914 + L1PA13 LINE L1 6072 6122 -41 227 226 0 38 chr10 1475866 1475919 -138840846 + L1PA13 LINE L1 6072 6122 -41 243 208 0 38 chr10 1475968 1476021 -138840744 + L1PA13 LINE L1 6072 6122 -41 243 208 0 38 chr10 1476002 1476055 -138840710 + L1PA13 LINE L1 6072 6122 -41 * 277 219 35 31 chr10 1476036 1476123 -138840642 + L1PA13 LINE L1 6072 6141 -22 243 208 0 38 chr10 1476138 1476191 -138840574 + L1PA13 LINE L1 6072 6122 -41 * 277 217 43 29 chr10 1476172 1476241 -138840524 + L1PA13 LINE L1 6072 6141 -22 241 233 0 33 chr10 1476233 1476293 -138840472 + L1PA13 LINE L1 6065 6122 -41 * 227 226 0 38 chr10 1476444 1476497 -138840268 + L1PA13 LINE L1 6072 6122 -41 * 277 217 43 29 chr10 1476478 1476547 -138840218 + L1PA13 LINE L1 6072 6141 -22 259 217 0 33 chr10 1476539 1476599 -138840166 + L1PA13 LINE L1 6065 6122 -41 * 236 211 0 39 chr10 1476580 1476632 -138840133 + L1PA13 LINE L1 6072 6121 -42 * 234 226 0 38 chr10 1476614 1476667 -138840098 + L1PA13 LINE L1 6072 6122 -41 * 246 208 0 38 chr10 1476648 1476701 -138840064 + L1PA13 LINE L1 6072 6122 -41 425 125 62 25 chr10 1476725 1476805 -138839960 + L1PA13 LINE L1 6081 6163 0 21 0 0 0 chr10 1477336 1477357 -138839408 + AT_rich Low_complexity Low_complexity 1 21 0 2110 120 0 10 chr10 1477546 1477838 -138838927 + AluSx SINE Alu 1 289 -23 659 240 0 6 chr10 1478329 1478681 -138838084 + (TG)n Simple_repeat Simple_repeat 1 349 0 586 244 66 77 chr10 1479722 1480086 -138836679 + MLT1A2 LTR MaLR 2 361 -13 245 258 61 15 chr10 1480978 1481044 -138835721 + MIR SINE MIR 55 123 -85 220 265 243 15 chr10 1481289 1481425 -138835340 + MIR SINE MIR 15 181 -81 2111 130 3 13 chr10 1481496 1481804 -138834961 + AluSx SINE Alu 1 305 -7 1711 185 7 7 chr10 1482983 1483457 -138833308 - AluJo SINE Alu 0 312 7 1102 77 0 0 chr10 1484212 1484342 -138832423 + AluYb8 SINE Alu 1 130 -188 21223 114 12 17 chr10 1484352 1487747 -138829018 + L1P LINE L1 11 3388 -2758 414 0 0 0 chr10 1489028 1489074 -138827691 + (CA)n Simple_repeat Simple_repeat 1 46 0 285 271 171 0 chr10 1489321 1489450 -138827315 - MIR SINE MIR -90 172 22 1996 196 217 10 chr10 1489782 1490390 -138826375 + L1MC1 LINE L1 5600 6333 0 1487 180 23 23 chr10 1490499 1490799 -138825966 + L1PA15 LINE L1 5865 6164 -1 2264 106 3 3 chr10 1492755 1493056 -138823709 + AluSq SINE Alu 1 301 -12 225 94 0 0 chr10 1493129 1493161 -138823604 + (TC)n Simple_repeat Simple_repeat 1 32 0 2167 85 0 41 chr10 1493775 1494070 -138822695 + AluSg SINE Alu 12 294 -16 943 151 17 6 chr10 1495200 1495379 -138821386 - MSTB LTR MaLR -245 181 1 345 273 0 0 chr10 1495688 1495816 -138820949 + (CA)n Simple_repeat Simple_repeat 2 129 0 528 258 0 0 chr10 1495839 1496017 -138820748 + (CA)n Simple_repeat Simple_repeat 1 178 0 471 50 25 12 chr10 1497603 1497683 -138819082 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 182 275 0 0 chr10 1497690 1497730 -138819035 + L2 LINE L2 3255 3294 -19 300 172 0 0 chr10 1497752 1497810 -138818955 + (TGGA)n Simple_repeat Simple_repeat 4 61 0 1026 93 7 0 chr10 1499711 1499851 -138816914 - MER4E LTR ERV1 0 766 626 211 306 121 45 chr10 1500630 1500829 -138815936 - L2 LINE L2 -42 3271 3058 1835 112 0 79 chr10 1502138 1502468 -138814297 - AluSx SINE Alu 0 306 1 610 326 96 48 chr10 1502474 1503201 -138813564 - L2 LINE L2 -1904 1410 649 209 173 333 0 chr10 1503496 1503577 -138813188 + MER5A DNA MER1_type 61 168 -21 219 69 0 0 chr10 1506931 1506960 -138809805 + (TAA)n Simple_repeat Simple_repeat 2 30 0 2812 73 0 19 chr10 1507043 1507412 -138809353 + L1PA7 LINE L1 5792 6153 -1 398 276 88 0 chr10 1507491 1507661 -138809104 - MER5A DNA MER1_type 0 189 5 518 206 38 19 chr10 1507823 1507983 -138808782 - L1M4 LINE L1 -945 5201 5039 253 374 12 23 chr10 1508310 1508481 -138808284 - L2 LINE L2 -529 2785 2617 383 302 94 50 chr10 1508558 1508717 -138808048 + L2 LINE L2 3104 3269 -3 560 294 109 25 chr10 1508870 1508986 -138807779 + L2 LINE L2 1809 1914 -1400 189 0 0 0 chr10 1508986 1509007 -138807758 + (TC)n Simple_repeat Simple_repeat 1 21 0 560 294 109 25 chr10 1509007 1509165 -138807600 + L2 LINE L2 1914 2106 -1208 662 207 25 0 chr10 1509166 1509287 -138807478 - FRAM SINE Alu -21 155 32 525 276 23 6 chr10 1509306 1509480 -138807285 + MER5B DNA MER1_type 1 177 -1 1504 280 149 31 chr10 1509481 1510501 -138806264 + L2 LINE L2 2110 3309 -4 183 42 0 0 chr10 1510988 1511012 -138805753 + (CAA)n Simple_repeat Simple_repeat 2 25 0 285 229 0 0 chr10 1511357 1511418 -138805347 - LTR16A LTR ERVL -9 441 381 2590 134 3 3 chr10 1511419 1511793 -138804972 - THE1C LTR MaLR 0 375 2 1120 80 11 11 chr10 1511795 1511970 -138804795 - THE1C-int LTR MaLR -1 1579 1405 * 6422 115 53 8 chr10 1511968 1512968 -138803797 - THE1C-int LTR MaLR -535 1045 1 373 143 182 0 chr10 1512979 1513056 -138803709 - THE1C LTR MaLR -149 226 136 441 229 34 34 chr10 1513056 1513235 -138803530 + (CATGT)n Simple_repeat Simple_repeat 1 179 0 29537 97 8 16 chr10 1513342 1517807 -138798958 - L1P LINE L1 -1356 4790 358 1684 57 9 26 chr10 1517921 1518149 -138798616 + L1PA8 LINE L1 5947 6170 -2 372 373 158 6 chr10 1518178 1518500 -138798265 + L2 LINE L2 2452 2822 -492 235 264 108 48 chr10 1518526 1518693 -138798072 + L2 LINE L2 3122 3298 -15 214 217 22 0 chr10 1518745 1518791 -138797974 + L2 LINE L2 3220 3266 -6 2740 236 69 42 chr10 1519753 1520761 -138796004 + L1 LINE L1 2873 3908 -2238 22288 45 0 0 chr10 1520761 1524369 -138792396 + L1PA4 LINE L1 2585 6153 -2 245 269 20 12 chr10 1524377 1524502 -138792263 + L1 LINE L1 4247 4375 -1771 315 229 123 16 chr10 1524508 1524630 -138792135 + LTR33 LTR ERVL 2 136 -385 180 77 0 0 chr10 1524732 1524758 -138792007 + (CCA)n Simple_repeat Simple_repeat 3 28 0 268 229 14 14 chr10 1526102 1526172 -138790593 + L1MCa LINE L1 20 89 -6337 23 0 0 0 chr10 1527866 1527889 -138788876 + AT_rich Low_complexity Low_complexity 1 23 0 369 305 72 18 chr10 1528388 1528611 -138788154 - MARNA DNA Mariner -166 420 186 963 184 134 20 chr10 1529424 1529625 -138787140 + MER58A DNA MER1_type 1 224 0 292 336 116 14 chr10 1530029 1530175 -138786590 - MIR3 SINE MIR -11 197 37 411 280 100 10 chr10 1530217 1530417 -138786348 - LTR33 LTR ERVL 0 521 304 183 286 54 0 chr10 1530671 1530727 -138786038 + L2 LINE L2 3255 3313 0 1535 210 12 18 chr10 1530919 1531257 -138785508 - MLT1E3 LTR MaLR 0 624 289 670 150 19 3 chr10 1531285 1531457 -138785308 - MLT1E1 LTR MaLR -424 230 5 21 0 0 0 chr10 1531555 1531576 -138785189 + AT_rich Low_complexity Low_complexity 1 21 0 229 67 0 167 chr10 1531851 1531911 -138784854 + MER50 LTR ERV1 658 707 -27 1837 155 16 13 chr10 1531936 1532246 -138784519 - AluJb SINE Alu -1 311 1 347 202 11 0 chr10 1534768 1534857 -138781908 + GA-rich Low_complexity Low_complexity 1 90 0 2446 133 14 0 chr10 1535869 1536237 -138780528 + MER83C LTR ERV1 1 373 0 4568 214 52 24 chr10 1538641 1539060 -138777705 + L1 LINE L1 3950 4355 -1791 2352 84 0 14 chr10 1539060 1539357 -138777408 + AluY SINE Alu 1 293 -18 4568 214 52 24 chr10 1539357 1540212 -138776553 + L1 LINE L1 4355 5261 -885 214 346 53 30 chr10 1540473 1540606 -138776159 + L3 LINE CR1 812 947 -630 1676 138 7 22 chr10 1541429 1541705 -138775060 - AluSx SINE Alu -6 306 35 671 283 28 31 chr10 1542457 1542830 -138773935 + L1MA9 LINE L1 5935 6306 -6 240 86 0 0 chr10 1543423 1543458 -138773307 + (CA)n Simple_repeat Simple_repeat 1 35 0 2385 100 0 3 chr10 1545777 1546087 -138770678 + AluSg SINE Alu 1 309 -1 4421 165 14 7 chr10 1549081 1549966 -138766799 + L1PB4 LINE L1 5183 6072 -84 524 233 15 0 chr10 1550068 1550201 -138766564 + L1PB4 LINE L1 6022 6156 0 209 326 45 0 chr10 1551059 1551148 -138765617 + MIR SINE MIR 117 209 -53 1754 160 13 26 chr10 1551506 1551812 -138764953 - AluJb SINE Alu -10 302 1 2252 124 0 3 chr10 1552146 1552452 -138764313 + AluSx SINE Alu 1 305 -7 542 239 6 0 chr10 1554385 1554561 -138762204 + (CA)n Simple_repeat Simple_repeat 2 178 0 542 254 3 3 chr10 1554604 1554955 -138761810 + (CA)n Simple_repeat Simple_repeat 1 351 0 202 222 0 22 chr10 1555613 1555658 -138761107 + L2 LINE L2 3261 3304 -9 345 269 148 9 chr10 1556977 1557085 -138759680 - MER5A DNA MER1_type -1 188 66 251 229 0 29 chr10 1557366 1557436 -138759329 + CT-rich Low_complexity Low_complexity 1 68 0 319 266 132 82 chr10 1557885 1558362 -138758403 - L1MEc LINE L1 -4657 1906 1406 222 272 0 26 chr10 1558520 1558709 -138758056 + CT-rich Low_complexity Low_complexity 1 184 0 210 200 32 42 chr10 1558722 1558817 -138757948 + (TCTCG)n Simple_repeat Simple_repeat 2 95 0 345 316 37 0 chr10 1559926 1560062 -138756703 + (CATG)n Simple_repeat Simple_repeat 3 143 0 315 122 0 0 chr10 1562628 1562677 -138754088 + (GA)n Simple_repeat Simple_repeat 1 49 0 252 0 0 0 chr10 1563128 1563156 -138753609 + (TG)n Simple_repeat Simple_repeat 1 28 0 368 230 0 6 chr10 1563947 1564125 -138752640 + CT-rich Low_complexity Low_complexity 2 178 0 323 306 183 31 chr10 1564165 1564613 -138752152 - L1MEc LINE L1 -5063 1321 806 213 146 0 0 chr10 1564657 1564705 -138752060 + (TC)n Simple_repeat Simple_repeat 1 48 0 2495 94 173 5 chr10 1566592 1567008 -138749757 + LTR19A LTR ERV1 1 486 0 873 254 139 68 chr10 1567809 1568371 -138748394 + MLT1E2 LTR MaLR 20 621 -5 26 30 0 0 chr10 1568848 1568881 -138747884 + AT_rich Low_complexity Low_complexity 1 33 0 2381 209 51 41 chr10 1568897 1569393 -138747372 - L1MC3 LINE L1 -1 7784 7294 2224 121 7 0 chr10 1569393 1569690 -138747075 - AluSx SINE Alu -13 299 1 2381 209 51 41 chr10 1569690 1569866 -138746899 - L1MC3 LINE L1 -491 7294 5648 283 329 0 0 chr10 1569868 1570026 -138746739 + (TG)n Simple_repeat Simple_repeat 2 159 0 861 231 16 0 chr10 1570041 1570240 -138746525 - L1MC/D LINE L1 -583 5572 5493 261 315 76 51 chr10 1570360 1570557 -138746208 - MIR SINE MIR -37 225 24 644 206 6 17 chr10 1571728 1571908 -138744857 + (TATG)n Simple_repeat Simple_repeat 2 179 0 184 338 73 50 chr10 1572776 1572995 -138743770 - MIR SINE MIR -14 248 25 212 310 126 0 chr10 1576267 1576354 -138740411 - L2 LINE L2 -3 3310 3213 187 266 9 9 chr10 1580250 1580359 -138736406 + (TG)n Simple_repeat Simple_repeat 1 109 0 418 313 50 0 chr10 1580359 1580519 -138736246 + (CATG)n Simple_repeat Simple_repeat 1 168 0 205 264 28 7 chr10 1580536 1580680 -138736085 + (TG)n Simple_repeat Simple_repeat 2 148 0 193 311 0 14 chr10 1580815 1580889 -138735876 - L3b LINE CR1 -210 1373 1301 1603 91 45 0 chr10 1581189 1581409 -138735356 - MER30 DNA MER1_type 0 230 1 1921 166 0 3 chr10 1583085 1583386 -138733379 - AluSx SINE Alu -12 300 1 231 269 83 9 chr10 1587413 1587521 -138729244 + L1ME4a LINE L1 6006 6121 0 225 301 88 37 chr10 1587723 1587939 -138728826 - L2 LINE L2 -215 3098 2872 * 310 288 64 0 chr10 1587915 1588040 -138728725 - L2 LINE L2 -1579 1735 1603 516 183 39 0 chr10 1588494 1588598 -138728167 - MLT1F1 LTR MaLR -3 564 457 3304 138 25 6 chr10 1588624 1589138 -138727627 - MER1A DNA MER1_type -5 524 1 23 0 0 0 chr10 1589587 1589610 -138727155 + AT_rich Low_complexity Low_complexity 1 23 0 345 269 32 11 chr10 1593181 1593274 -138723491 + MIR SINE MIR 124 218 -44 181 228 158 79 chr10 1596044 1596145 -138720620 + MIR SINE MIR 18 126 -82 1172 99 0 0 chr10 1596797 1596939 -138719826 - AluSq/x SINE Alu -170 142 1 256 250 65 46 chr10 1599100 1599208 -138717557 + MER5A DNA MER1_type 59 168 -21 667 166 24 19 chr10 1601276 1601468 -138715297 + GA-rich Low_complexity Low_complexity 1 190 -237 186 43 0 0 chr10 1601468 1601491 -138715274 + (GGGA)n Simple_repeat Simple_repeat 4 26 0 667 166 24 19 chr10 1601491 1601701 -138715064 + GA-rich Low_complexity Low_complexity 190 427 0 189 300 89 11 chr10 1603206 1603296 -138713469 + L2 LINE L2 1354 1450 -1864 588 218 0 0 chr10 1603583 1603757 -138713008 + (CA)n Simple_repeat Simple_repeat 1 174 0 225 163 61 0 chr10 1603758 1603807 -138712958 - MLT1B LTR MaLR -336 54 3 328 296 138 0 chr10 1605346 1605505 -138711260 - MIR SINE MIR -64 198 18 247 202 18 175 chr10 1605507 1605621 -138711144 + MER58 DNA MER1_type 1 96 -119 418 214 41 0 chr10 1605625 1605723 -138711042 + MER58 DNA MER1_type 2318 2419 -1 2496 67 0 0 chr10 1607464 1607762 -138709003 + AluY SINE Alu 1 298 -13 235 273 68 0 chr10 1609182 1609270 -138707495 + LTR33 LTR ERVL 2 95 -426 273 274 53 0 chr10 1610839 1610952 -138705813 + LTR33 LTR ERVL 385 503 -18 537 239 8 0 chr10 1611387 1611504 -138705261 - AluSg/x SINE Alu -21 289 172 744 242 15 14 chr10 1611900 1612193 -138704572 + L1ME1 LINE L1 2286 2576 -3806 3614 274 84 19 chr10 1612196 1612295 -138704470 + L1ME1 LINE L1 2802 2893 -3489 2141 118 14 0 chr10 1612295 1612582 -138704183 - AluSc SINE Alu -18 291 1 3614 274 84 19 chr10 1612582 1614225 -138702540 + L1ME1 LINE L1 2893 4658 -1724 1342 184 0 0 chr10 1614236 1614453 -138702312 - AluJb SINE Alu 0 312 96 2684 231 66 32 chr10 1614489 1615639 -138701126 + L1ME1 LINE L1 4674 5855 -547 805 327 18 3 chr10 1615786 1616119 -138700646 + L1ME1 LINE L1 5891 6228 -174 529 229 88 35 chr10 1616761 1616902 -138699863 - MIR SINE MIR -72 190 37 1642 203 3 16 chr10 1616902 1617246 -138699519 + AluJb SINE Alu 6 312 0 529 229 88 35 chr10 1617246 1617274 -138699491 - MIR SINE MIR -225 37 12 24 0 0 0 chr10 1617597 1617621 -138699144 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr10 1617908 1617938 -138698827 + AT_rich Low_complexity Low_complexity 1 30 0 259 114 0 0 chr10 1619770 1619814 -138696951 - HSMAR1 DNA Mariner -1243 44 1 184 321 57 0 chr10 1622132 1622185 -138694580 - MIR3 SINE MIR -48 160 105 330 328 103 29 chr10 1623110 1623314 -138693451 - L2 LINE L2 -1 3312 3094 1998 120 0 11 chr10 1623653 1623971 -138692794 + AluSg SINE Alu 33 310 0 222 222 0 19 chr10 1624157 1624211 -138692554 + CT-rich Low_complexity Low_complexity 1 53 0 322 261 13 21 chr10 1625187 1625427 -138691338 + (CA)n Simple_repeat Simple_repeat 1 237 0 1575 215 35 81 chr10 1625747 1626243 -138690522 + MLT2B1 LTR ERVL 1 518 -2 1055 206 59 0 chr10 1626243 1626462 -138690303 + MER46A DNA MER2_type 1 232 -4 796 74 8 8 chr10 1626470 1626592 -138690173 + (TCTA)n Simple_repeat Simple_repeat 3 124 0 1575 215 35 81 chr10 1626592 1626631 -138690134 + MLT2B1 LTR ERVL 481 520 0 1970 159 10 0 chr10 1629181 1629476 -138687289 + AluJb SINE Alu 1 298 -14 207 162 35 35 chr10 1629615 1629788 -138686977 + (TA)n Simple_repeat Simple_repeat 1 173 0 269 171 57 0 chr10 1629801 1629889 -138686876 + (TA)n Simple_repeat Simple_repeat 1 93 0 505 320 39 11 chr10 1631502 1631683 -138685082 - MIR SINE MIR -10 252 67 2086 89 7 14 chr10 1632508 1632822 -138683943 + AluSg SINE Alu 1 312 0 268 31 0 0 chr10 1632790 1632842 -138683923 + (CAAAA)n Simple_repeat Simple_repeat 3 54 0 271 234 0 0 chr10 1633030 1633077 -138683688 - L3 LINE CR1 -112 1465 1419 252 137 0 0 chr10 1633582 1633633 -138683132 + (CA)n Simple_repeat Simple_repeat 2 52 0 2254 107 0 0 chr10 1634677 1634968 -138681797 + AluSx SINE Alu 1 291 -21 285 340 97 0 chr10 1635146 1635249 -138681516 + L2 LINE L2 3199 3311 -2 21 0 0 0 chr10 1635511 1635532 -138681233 + AT_rich Low_complexity Low_complexity 1 21 0 347 211 0 7 chr10 1635635 1635782 -138680983 + (CA)n Simple_repeat Simple_repeat 2 147 0 302 297 159 12 chr10 1635962 1636128 -138680637 - MIR SINE MIR -58 150 14 285 217 86 99 chr10 1638887 1639039 -138677726 - L2 LINE L2 -93 3179 3030 180 219 0 0 chr10 1640267 1640308 -138676457 + (TG)n Simple_repeat Simple_repeat 1 41 0 308 330 23 0 chr10 1640321 1640409 -138676356 - L1MC4 LINE L1 -1339 6703 6614 225 186 71 29 chr10 1640410 1640480 -138676285 + L1MCa LINE L1 1996 2068 -4358 248 264 0 9 chr10 1640482 1640592 -138676173 + (TATG)n Simple_repeat Simple_repeat 4 112 0 332 246 107 3 chr10 1643108 1643272 -138673493 + MER67D LTR ERV1 274 514 0 353 175 10 0 chr10 1644386 1644489 -138672276 + (CA)n Simple_repeat Simple_repeat 1 104 0 540 200 0 0 chr10 1644551 1644731 -138672034 + (CA)n Simple_repeat Simple_repeat 1 180 0 418 191 0 22 chr10 1644762 1644945 -138671820 + (CA)n Simple_repeat Simple_repeat 2 180 0 275 372 40 0 chr10 1645349 1645548 -138671217 + Charlie8 DNA MER1_type 26 232 -2185 215 291 18 0 chr10 1647841 1647896 -138668869 - MIR SINE MIR -64 144 89 330 26 0 0 chr10 1648310 1648349 -138668416 + (TG)n Simple_repeat Simple_repeat 2 40 0 244 363 71 0 chr10 1648815 1648928 -138667837 + MIR SINE MIR 48 168 -94 200 238 95 71 chr10 1650150 1650276 -138666489 + MIR SINE MIR 24 152 -110 630 203 68 0 chr10 1651003 1651121 -138665644 - FLAM_A SINE Alu -7 126 1 426 207 0 0 chr10 1653709 1653791 -138662974 - MER94 DNA DNA -52 82 1 498 380 22 0 chr10 1655955 1656139 -138660626 + MIR3 SINE MIR 14 201 -7 196 303 278 25 chr10 1657522 1657684 -138659081 - MIR SINE MIR -28 234 32 21 0 0 0 chr10 1659157 1659178 -138657587 + AT_rich Low_complexity Low_complexity 1 21 0 192 200 0 0 chr10 1659651 1659711 -138657054 + (TG)n Simple_repeat Simple_repeat 1 60 0 2180 112 14 0 chr10 1661500 1661794 -138654971 - AluSx SINE Alu -12 300 3 23 33 0 0 chr10 1662094 1662124 -138654641 + AT_rich Low_complexity Low_complexity 1 30 0 2649 127 33 55 chr10 1663452 1663908 -138652857 - MER83 LTR ERV1 -2 446 1 340 291 108 54 chr10 1664029 1664324 -138652441 - L1MC4a LINE L1 -1934 5874 5564 223 26 77 0 chr10 1664449 1664488 -138652277 + T-rich Low_complexity Low_complexity 1 42 0 2295 168 8 0 chr10 1665486 1665873 -138650892 + MLT1B LTR MaLR 1 390 0 290 259 63 63 chr10 1666004 1666162 -138650603 + Charlie5 DNA MER1_type 2440 2597 -15 198 0 0 0 chr10 1666370 1666392 -138650373 + (TG)n Simple_repeat Simple_repeat 1 22 0 257 303 55 28 chr10 1666444 1666553 -138650212 + L2 LINE L2 3199 3310 -3 1597 21 0 16 chr10 1669796 1669986 -138646779 - L1PA4 LINE L1 -4 6151 5965 287 274 129 16 chr10 1671502 1671626 -138645139 - MER103 DNA DNA -12 154 17 210 91 0 0 chr10 1672100 1672133 -138644632 + (T)n Simple_repeat Simple_repeat 1 33 0 447 159 0 28 chr10 1672396 1672503 -138644262 + CT-rich Low_complexity Low_complexity 3 106 0 1994 159 7 0 chr10 1672511 1672819 -138643946 - AluSx SINE Alu 0 312 3 210 143 0 0 chr10 1672996 1673031 -138643734 + (GGGA)n Simple_repeat Simple_repeat 4 38 0 180 0 0 0 chr10 1673919 1673939 -138642826 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1897 127 0 12 chr10 1673948 1674207 -138642558 - AluSx SINE Alu -56 256 1 4661 154 47 9 chr10 1674469 1675465 -138641300 + L1PA16 LINE L1 5118 6161 -5 254 57 0 0 chr10 1675465 1675500 -138641265 + L1PA16 LINE L1 6127 6161 -5 237 286 0 59 chr10 1677841 1677882 -138638883 + (CATATA)n Simple_repeat Simple_repeat 3 45 -69 183 80 0 0 chr10 1677882 1677907 -138638858 + (CA)n Simple_repeat Simple_repeat 2 26 0 237 286 0 59 chr10 1677907 1677984 -138638781 + (CATATA)n Simple_repeat Simple_repeat 45 114 0 248 307 72 42 chr10 1678327 1678493 -138638272 + MIR3 SINE MIR 14 184 -24 671 207 0 0 chr10 1678970 1679091 -138637674 + MLT1B LTR MaLR 1 121 -269 415 233 103 0 chr10 1679837 1679953 -138636812 + MIR SINE MIR 133 260 -2 281 267 27 0 chr10 1681933 1682008 -138634757 + L2 LINE L2 3191 3267 -5 273 147 29 15 chr10 1687117 1687185 -138629580 + (TA)n Simple_repeat Simple_repeat 2 70 0 180 0 0 0 chr10 1689235 1689255 -138627510 + (T)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr10 1689825 1689846 -138626919 + AT_rich Low_complexity Low_complexity 1 21 0 449 238 156 0 chr10 1693630 1693752 -138623013 + MIR SINE MIR 36 176 -86 316 292 128 32 chr10 1695452 1695671 -138621094 - MIR SINE MIR -21 241 2 1789 110 0 0 chr10 1696854 1697119 -138619646 + AluSx SINE Alu 50 314 0 1078 164 5 21 chr10 1701629 1701818 -138614947 + AluJb SINE Alu 34 219 -93 1901 270 28 24 chr10 1703099 1703681 -138613084 + L1MC2 LINE L1 156 739 -5825 783 175 81 6 chr10 1703681 1703841 -138612924 + MER30B DNA MER1_type 19 190 0 3685 196 57 21 chr10 1703888 1705060 -138611705 + L1MC2 LINE L1 574 1802 -4762 * 4762 178 39 24 chr10 1705047 1705145 -138611620 + L1MC2 LINE L1 5609 5704 -1058 2517 8 0 0 chr10 1705145 1705413 -138611352 + AluY SINE Alu 44 311 0 4762 178 39 24 chr10 1705413 1706353 -138610412 + L1MC2 LINE L1 5704 6664 -98 282 329 0 0 chr10 1707058 1707140 -138609625 + MER5B DNA MER1_type 97 178 0 230 140 40 140 chr10 1709886 1709986 -138606779 + MER39 LTR ERV1 62 151 -556 486 0 0 0 chr10 1710567 1710621 -138606144 + (CA)n Simple_repeat Simple_repeat 2 55 0 22 0 0 0 chr10 1711201 1711223 -138605542 + AT_rich Low_complexity Low_complexity 1 22 0 204 125 0 0 chr10 1711661 1711693 -138605072 + (CATATA)n Simple_repeat Simple_repeat 2 33 0 273 176 0 88 chr10 1711696 1711798 -138604967 + L1MC4 LINE L1 6611 6703 -1339 285 288 0 0 chr10 1762549 1762622 -138554143 + (TA)n Simple_repeat Simple_repeat 2 74 0 1670 53 5 0 chr10 1763255 1763461 -138553304 - AluY SINE Alu -3 308 102 1772 140 19 0 chr10 1763978 1764242 -138552523 - AluSg SINE Alu -18 292 24 1537 165 38 52 chr10 1764272 1764563 -138552202 - AluJb SINE Alu -25 287 1 23 0 0 0 chr10 1764752 1764775 -138551990 + AT_rich Low_complexity Low_complexity 1 23 0 1772 111 96 4 chr10 1764803 1765096 -138551669 + AluSp SINE Alu 1 317 0 2482 129 26 7 chr10 1765836 1766263 -138550502 + MER83 LTR ERV1 5 439 -9 266 226 73 15 chr10 1766398 1766535 -138550230 - L1ME4a LINE L1 -210 5911 5767 30 69 0 0 chr10 1766538 1766596 -138550169 + AT_rich Low_complexity Low_complexity 1 58 0 29 0 0 0 chr10 1766683 1766712 -138550053 + AT_rich Low_complexity Low_complexity 1 29 0 309 240 39 19 chr10 1766762 1766884 -138549881 - L1MC2 LINE L1 -10 6334 6206 4641 200 23 11 chr10 1766980 1768448 -138548317 - L1MC3 LINE L1 -109 8487 5535 1202 149 8 56 chr10 1768448 1768716 -138548049 - MER44D DNA MER2_type -84 525 1 441 246 0 0 chr10 1769774 1769908 -138546857 + (CA)n Simple_repeat Simple_repeat 1 134 0 180 122 163 0 chr10 1770294 1770343 -138546422 - MER5C DNA MER1_type -226 98 42 570 169 0 0 chr10 1770538 1770656 -138546109 + (TCTA)n Simple_repeat Simple_repeat 3 120 0 321 226 10 10 chr10 1770659 1770761 -138546004 - L1MC2 LINE L1 -2337 5471 5370 252 86 0 0 chr10 1770975 1771010 -138545755 + (TG)n Simple_repeat Simple_repeat 1 35 0 1079 204 18 18 chr10 1772227 1772507 -138544258 + L1 LINE L1 4000 4279 -1867 322 337 69 31 chr10 1772552 1772843 -138543922 - L1MC3 LINE L1 -1863 5094 4793 249 280 94 24 chr10 1772912 1773241 -138543524 - L1MC3 LINE L1 -2406 4551 4200 261 165 44 22 chr10 1773276 1773367 -138543398 + (TA)n Simple_repeat Simple_repeat 2 94 0 242 276 25 45 chr10 1773392 1773591 -138543174 - L1MC3 LINE L1 -2832 4125 3931 22 56 0 0 chr10 1773925 1773961 -138542804 + AT_rich Low_complexity Low_complexity 1 36 0 1353 167 85 35 chr10 1774000 1774282 -138542483 + AluJb SINE Alu 3 298 -14 28 61 0 0 chr10 1775089 1775138 -138541627 + AT_rich Low_complexity Low_complexity 1 49 0 2385 26 0 13 chr10 1776123 1776427 -138540338 - L1PA4 LINE L1 -181 5974 5675 1283 67 0 46 chr10 1776427 1776654 -138540111 + L1PA4 LINE L1 5970 6155 0 24 32 0 0 chr10 1778832 1778863 -138537902 + AT_rich Low_complexity Low_complexity 1 31 0 824 55 31 0 chr10 1780155 1780282 -138536483 + (TCTA)n Simple_repeat Simple_repeat 4 134 0 1810 163 25 0 chr10 1780340 1780623 -138536142 + AluSx SINE Alu 1 290 -22 1211 156 20 8 chr10 1780988 1781238 -138535527 - L1MA4 LINE L1 0 6300 6048 21 0 0 0 chr10 1781556 1781577 -138535188 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 1782380 1782401 -138534364 + AT_rich Low_complexity Low_complexity 1 21 0 785 302 121 6 chr10 1783416 1784094 -138532671 - L1MC3 LINE L1 -3161 3796 3041 450 293 87 16 chr10 1784535 1785056 -138531709 - L1MC3 LINE L1 -4471 2486 1971 338 242 123 76 chr10 1785064 1785366 -138531399 - L1MC3 LINE L1 -5046 1914 1599 186 393 0 22 chr10 1785397 1785486 -138531279 - L2 LINE L2 -43 3229 3143 1320 179 126 60 chr10 1785721 1786176 -138530589 - L1MA9 LINE L1 -4 6308 5825 1060 279 61 0 chr10 1789421 1789797 -138526968 - L1MC3 LINE L1 -6086 773 375 233 296 20 0 chr10 1789913 1790011 -138526754 - L1MC3 LINE L1 -6457 402 303 2097 118 28 0 chr10 1790193 1790480 -138526285 + AluSx SINE Alu 1 295 -17 24 77 0 0 chr10 1790947 1790999 -138525766 + AT_rich Low_complexity Low_complexity 1 52 0 198 0 0 0 chr10 1791526 1791548 -138525217 + (T)n Simple_repeat Simple_repeat 1 22 0 1601 193 11 0 chr10 1792401 1792686 -138524079 + AluJo SINE Alu 5 292 -20 385 295 46 18 chr10 1793681 1793966 -138522799 + HAL1 LINE L1 993 1285 -1222 22 0 0 0 chr10 1796614 1796636 -138520129 + AT_rich Low_complexity Low_complexity 1 22 0 2131 125 0 3 chr10 1796638 1796941 -138519824 + AluSx SINE Alu 1 302 -10 254 226 0 10 chr10 1797126 1797228 -138519537 + (CAT)n Simple_repeat Simple_repeat 2 102 0 4475 211 50 16 chr10 1798188 1799327 -138517438 + L1MC2 LINE L1 19 1196 -5230 6861 240 34 41 chr10 1799333 1799737 -138517028 + L1MC2 LINE L1 2756 3161 -3463 2099 150 3 6 chr10 1799737 1800050 -138516715 + AluSx SINE Alu 1 312 0 6861 240 34 41 chr10 1800050 1802288 -138514477 + L1MC2 LINE L1 3161 5365 -1259 2195 98 10 14 chr10 1802288 1802583 -138514182 - AluSg1 SINE Alu -15 294 1 6861 240 34 41 chr10 1802583 1803386 -138513379 + L1MC2 LINE L1 5365 6172 -452 2554 180 19 6 chr10 1803386 1803903 -138512862 + L1MC1 LINE L1 5810 6333 0 22 35 0 0 chr10 1804996 1805025 -138511740 + AT_rich Low_complexity Low_complexity 1 29 0 7254 39 2 2 chr10 1805324 1806572 -138510193 - L1PA5 LINE L1 -4 6150 4904 260 322 63 24 chr10 1806816 1807071 -138509694 + MLT2E LTR ERVL 342 606 -22 2215 116 0 0 chr10 1807648 1807940 -138508825 + AluSx SINE Alu 5 296 -16 612 211 7 26 chr10 1809848 1810000 -138506765 + MLT2B2 LTR ERVL 1 149 -366 1491 243 39 0 chr10 1810299 1810711 -138506054 + MLT2B1 LTR ERVL 91 518 -2 222 37 0 0 chr10 1811125 1811152 -138505613 + (CA)n Simple_repeat Simple_repeat 1 27 0 2002 145 3 0 chr10 1811183 1811490 -138505275 + AluSx SINE Alu 1 308 0 1389 239 19 3 chr10 1813309 1813681 -138503084 - MLT1B LTR MaLR -7 383 6 364 259 130 12 chr10 1813734 1813896 -138502869 + MLT1G1 LTR MaLR 27 207 -388 788 118 8 0 chr10 1815154 1815281 -138501484 + (TTCC)n Simple_repeat Simple_repeat 2 129 0 7457 135 2 1 chr10 1815317 1816533 -138500232 + L1P LINE L1 3518 4735 -1411 252 0 0 0 chr10 1817127 1817155 -138499610 + (T)n Simple_repeat Simple_repeat 1 28 0 246 266 0 0 chr10 1817765 1817844 -138498921 + (CA)n Simple_repeat Simple_repeat 1 79 0 345 269 128 13 chr10 1818940 1819089 -138497676 - L1MC/D LINE L1 -2332 5476 5311 21 36 0 0 chr10 1819099 1819127 -138497638 + AT_rich Low_complexity Low_complexity 1 28 0 209 204 0 61 chr10 1819326 1819375 -138497390 - L2 LINE L2 -81 3232 3187 279 318 29 6 chr10 1819917 1820090 -138496675 + L1MC4a LINE L1 5731 5907 -437 345 301 33 20 chr10 1820124 1820277 -138496488 + L1ME1 LINE L1 5991 6145 -21 403 243 130 40 chr10 1820285 1820462 -138496303 + L1MC4a LINE L1 6171 6363 -1445 314 165 37 11 chr10 1820616 1820712 -138496053 + L1MC4a LINE L1 6523 6615 -1193 425 317 20 24 chr10 1820832 1821094 -138495671 + L1MC4a LINE L1 6587 6904 -939 2279 263 58 22 chr10 1821233 1822957 -138493808 + L1MCb LINE L1 122 2019 -4545 6186 275 50 29 chr10 1823108 1823399 -138493366 + L1MCb LINE L1 2305 2588 -4090 2722 31 0 0 chr10 1823399 1823719 -138493046 - L1PA4 LINE L1 -3 6152 5833 6186 275 50 29 chr10 1823719 1825340 -138491425 + L1MCb LINE L1 2588 4174 -2504 1614 170 0 47 chr10 1825340 1825658 -138491107 + AluJb SINE Alu 8 310 -2 6186 275 50 29 chr10 1825658 1827291 -138489474 + L1MCb LINE L1 4174 5920 -758 2300 111 0 0 chr10 1827438 1827744 -138489021 - AluSq SINE Alu -6 307 2 2195 96 7 0 chr10 1829584 1829887 -138486878 - AluSg SINE Alu -5 305 1 474 228 43 47 chr10 1830754 1830986 -138485779 - MER76 LTR ERV -457 231 1 601 333 51 30 chr10 1831002 1831338 -138485427 + L2 LINE L2 2261 2603 -711 343 325 32 0 chr10 1833322 1833448 -138483317 - MIR SINE MIR -117 145 16 28 107 0 0 chr10 1833789 1833901 -138482864 + AT_rich Low_complexity Low_complexity 1 112 0 299 234 0 39 chr10 1834299 1834376 -138482389 + GA-rich Low_complexity Low_complexity 3 76 0 1378 216 28 48 chr10 1834774 1834958 -138481807 + MLT1C LTR MaLR 1 187 -280 2544 74 0 0 chr10 1834958 1835269 -138481496 + AluY SINE Alu 1 311 0 1378 216 28 48 chr10 1835269 1835546 -138481219 + MLT1C LTR MaLR 187 453 -14 461 299 65 23 chr10 1836326 1836677 -138480088 - LTR16C LTR ERVL -2 489 124 1873 143 0 34 chr10 1837192 1837516 -138479249 - AluSx SINE Alu 0 314 1 224 291 0 0 chr10 1838029 1838084 -138478681 + L2 LINE L2 3253 3307 -6 205 161 0 0 chr10 1838086 1838117 -138478648 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 2207 124 0 0 chr10 1838702 1839009 -138477756 + AluSg SINE Alu 1 307 -3 216 314 0 0 chr10 1844558 1844628 -138472137 + A-rich Low_complexity Low_complexity 2 71 0 204 245 0 0 chr10 1844729 1844778 -138471987 + A-rich Low_complexity Low_complexity 1 49 0 1843 158 0 7 chr10 1845453 1845756 -138471009 - AluJo SINE Alu -11 301 1 700 193 0 8 chr10 1845975 1846094 -138470671 + AluJb SINE Alu 12 129 -183 327 203 0 0 chr10 1846423 1846492 -138470273 + (CA)n Simple_repeat Simple_repeat 2 70 0 2843 200 38 22 chr10 1846518 1847233 -138469532 - ERVL LTR ERVL -1934 3830 3105 318 50 0 0 chr10 1847239 1847279 -138469486 + (CA)n Simple_repeat Simple_repeat 2 41 0 798 251 45 0 chr10 1847294 1847517 -138469248 - MLT2C2 LTR ERVL -231 233 1 1602 179 55 10 chr10 1847544 1847834 -138468931 + AluJb SINE Alu 1 303 -9 313 322 43 6 chr10 1848357 1848693 -138468072 + L1ME LINE L1 5155 5501 -663 2293 108 0 0 chr10 1848988 1849285 -138467480 - AluSq SINE Alu -16 297 1 225 0 0 0 chr10 1849405 1849430 -138467335 + (TAAAA)n Simple_repeat Simple_repeat 5 29 0 184 299 62 31 chr10 1851038 1851135 -138465630 - MIR SINE MIR -85 177 78 264 352 16 16 chr10 1851398 1851526 -138465239 - MIR SINE MIR -118 144 17 1749 163 36 28 chr10 1851649 1852121 -138464644 - MLT2A2 LTR ERVL -81 461 1 936 225 55 37 chr10 1852415 1852795 -138463970 - L1MA9 LINE L1 -25 6266 5859 190 54 27 27 chr10 1853108 1853145 -138463620 + (TAA)n Simple_repeat Simple_repeat 3 39 0 457 257 0 0 chr10 1853147 1853260 -138463505 + L1M2 LINE L1 5681 5793 -519 225 182 15 30 chr10 1853753 1853819 -138462946 - Charlie5 DNA MER1_type -129 2483 2419 1434 94 0 0 chr10 1853824 1854016 -138462749 + L1PA7 LINE L1 5950 6141 -13 232 241 0 0 chr10 1857392 1857446 -138459319 - MIR SINE MIR -26 236 183 994 270 59 28 chr10 1857983 1858336 -138458429 - L1MB2 LINE L1 -38 6133 5768 675 306 65 7 chr10 1858364 1858639 -138458126 - L2 LINE L2 -1005 2309 2019 225 0 100 0 chr10 1861433 1861473 -138455292 + T-rich Low_complexity Low_complexity 2 45 0 21 57 0 0 chr10 1861768 1861803 -138454962 + AT_rich Low_complexity Low_complexity 1 35 0 258 259 86 25 chr10 1862522 1862684 -138454081 - L1MB2 LINE L1 -1501 4645 4474 201 133 0 0 chr10 1862809 1862839 -138453926 + (TC)n Simple_repeat Simple_repeat 1 30 0 2043 81 11 0 chr10 1863370 1863631 -138453134 + AluSq SINE Alu 1 264 -49 352 257 71 0 chr10 1863936 1864076 -138452689 - L1MB2 LINE L1 -2222 3924 3775 434 261 62 26 chr10 1864776 1864971 -138451794 + MER3 DNA MER1_type 1 202 -7 22 0 0 0 chr10 1865160 1865182 -138451583 + AT_rich Low_complexity Low_complexity 1 22 0 2332 106 3 0 chr10 1867130 1867432 -138449333 + AluSx SINE Alu 1 303 -9 21 36 0 0 chr10 1870013 1870041 -138446724 + AT_rich Low_complexity Low_complexity 1 28 0 902 186 0 0 chr10 1870075 1870236 -138446529 + MER2 DNA MER2_type 3 163 -182 363 307 85 28 chr10 1872678 1872890 -138443875 - MIR SINE MIR -12 250 27 234 91 0 0 chr10 1874462 1874495 -138442270 + (TG)n Simple_repeat Simple_repeat 2 34 0 916 99 0 23 chr10 1875036 1875167 -138441598 + Charlie3 DNA MER1_type 2347 2474 -236 624 322 120 7 chr10 1875192 1875651 -138441114 + L2 LINE L2 1415 1925 -1389 421 227 104 25 chr10 1877299 1877462 -138439303 - MLT1F LTR MaLR -8 534 359 192 125 0 0 chr10 1878451 1878483 -138438282 + (A)n Simple_repeat Simple_repeat 1 32 0 23 33 0 0 chr10 1878603 1878633 -138438132 + AT_rich Low_complexity Low_complexity 1 30 0 1431 175 137 30 chr10 1879304 1879641 -138437124 - THE1C LTR MaLR -2 373 1 856 210 0 0 chr10 1879834 1880001 -138436764 - AluJb SINE Alu -9 303 137 192 40 0 0 chr10 1880671 1880696 -138436069 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 213 196 0 0 chr10 1881158 1881204 -138435561 + (CA)n Simple_repeat Simple_repeat 2 47 0 2130 125 3 0 chr10 1881692 1881987 -138434778 - AluSg SINE Alu -14 296 1 328 228 139 0 chr10 1883716 1883817 -138432948 + MLT1E LTR MaLR 22 136 -457 837 236 75 12 chr10 1883901 1884142 -138432623 + MLT1E LTR MaLR 289 544 -49 522 304 34 29 chr10 1884210 1884417 -138432348 + MIR SINE MIR 23 230 -32 686 268 115 102 chr10 1885668 1887237 -138429528 - HAL1 LINE L1 -110 2397 808 279 328 86 27 chr10 1887669 1887855 -138428910 - MIR SINE MIR -19 243 47 470 128 0 70 chr10 1888392 1888478 -138428287 + MADE1 DNA Mariner 1 80 0 4588 51 45 4 chr10 1888550 1889103 -138427662 - L1PA7 LINE L1 -7 6147 5572 208 312 9 64 chr10 1890014 1890123 -138426642 + MIR SINE MIR 45 147 -61 216 319 104 52 chr10 1890774 1890909 -138425856 + MIR SINE MIR 47 188 -74 2158 228 84 16 chr10 1891880 1892485 -138424280 + L1MB5 LINE L1 5529 6174 0 294 50 0 0 chr10 1892502 1892542 -138424223 + L1MB4 LINE L1 6139 6178 -2 371 73 18 0 chr10 1892543 1892598 -138424167 - Alu SINE Alu -1 300 245 2324 96 0 0 chr10 1892716 1893018 -138423747 - AluY SINE Alu -8 303 2 207 0 0 0 chr10 1893617 1893640 -138423125 + (T)n Simple_repeat Simple_repeat 1 23 0 643 274 96 5 chr10 1893810 1894029 -138422736 - MIR SINE MIR -20 242 4 231 277 69 40 chr10 1895127 1895228 -138421537 - MER5A DNA MER1_type -48 141 38 188 286 58 52 chr10 1895329 1895483 -138421282 - MIR SINE MIR -106 156 2 31 58 0 0 chr10 1896519 1896571 -138420194 + AT_rich Low_complexity Low_complexity 1 52 0 225 57 38 57 chr10 1897129 1897182 -138419583 + (TAGA)n Simple_repeat Simple_repeat 4 55 0 581 106 33 50 chr10 1897215 1897395 -138419370 + (TAGA)n Simple_repeat Simple_repeat 3 179 0 598 115 59 49 chr10 1897409 1897882 -138418883 + (TAGA)n Simple_repeat Simple_repeat 1 477 0 1723 177 0 19 chr10 1898011 1898322 -138418443 + AluJb SINE Alu 7 311 -1 302 80 20 0 chr10 1899242 1899292 -138417473 + (CAAAA)n Simple_repeat Simple_repeat 1 51 0 554 0 15 0 chr10 1899325 1899391 -138417374 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 315 0 0 0 chr10 1899901 1899936 -138416829 + (CA)n Simple_repeat Simple_repeat 2 36 0 364 181 60 45 chr10 1900368 1900501 -138416264 - LTR16A1 LTR ERVL -1 456 322 206 246 44 9 chr10 1900998 1901112 -138415653 + (TTATA)n Simple_repeat Simple_repeat 1 118 0 258 250 34 34 chr10 1901124 1901300 -138415465 + (TTATA)n Simple_repeat Simple_repeat 5 180 0 359 322 28 17 chr10 1901579 1901592 -138415173 + MIR SINE MIR 77 88 -174 1860 162 88 20 chr10 1901592 1901943 -138414822 + THE1C LTR MaLR 1 375 0 359 322 28 17 chr10 1901943 1902109 -138414656 + MIR SINE MIR 88 258 -4 2247 105 3 16 chr10 1902664 1902970 -138413795 + AluSx SINE Alu 1 302 -10 61 37 0 0 chr10 1904330 1904412 -138412353 + AT_rich Low_complexity Low_complexity 1 82 0 24 0 0 0 chr10 1904955 1904979 -138411786 + AT_rich Low_complexity Low_complexity 1 24 0 3316 109 10 41 chr10 1904990 1905505 -138411260 - L1MA1 LINE L1 -4 6298 5800 701 139 9 5 chr10 1905541 1905670 -138411095 - L1ME LINE L1 -358 5806 5676 541 92 26 13 chr10 1907175 1907251 -138409514 - MADE1 DNA Mariner 0 80 4 21 36 0 0 chr10 1907256 1907284 -138409481 + AT_rich Low_complexity Low_complexity 1 28 0 319 298 30 23 chr10 1907344 1907475 -138409290 - MER115 DNA AcHobo -11 682 551 859 140 0 22 chr10 1908543 1908679 -138408086 + AluSq/x SINE Alu 1 133 -179 2123 126 0 31 chr10 1908681 1908998 -138407767 + AluSx SINE Alu 1 307 -5 675 282 78 3 chr10 1910016 1910364 -138406401 - LTR16A LTR ERVL -20 430 57 23 68 0 0 chr10 1911152 1911196 -138405569 + AT_rich Low_complexity Low_complexity 1 44 0 836 263 127 58 chr10 1911780 1912213 -138404552 + MLT1C LTR MaLR 1 463 -4 1982 234 29 29 chr10 1912217 1912651 -138404114 + MLT1C-int LTR MaLR 1 414 -957 2001 112 63 0 chr10 1912651 1912936 -138403829 + AluSc SINE Alu 1 303 -6 1982 234 29 29 chr10 1912936 1913174 -138403591 + MLT1C-int LTR MaLR 414 650 -721 1106 256 86 14 chr10 1913245 1913593 -138403172 + MLT1C-int LTR MaLR 974 1346 -25 1088 228 66 89 chr10 1913604 1914074 -138402691 + MLT1C LTR MaLR 1 459 -8 213 338 0 0 chr10 1914117 1914194 -138402571 + MIR SINE MIR 67 143 -65 21 36 0 0 chr10 1915003 1915031 -138401734 + AT_rich Low_complexity Low_complexity 1 28 0 2469 101 51 25 chr10 1915127 1915482 -138401283 - THE1B LTR MaLR 0 364 1 2188 118 7 7 chr10 1915714 1916020 -138400745 - AluSc SINE Alu -3 306 1 29 28 0 0 chr10 1916248 1916284 -138400481 + AT_rich Low_complexity Low_complexity 1 36 0 259 269 219 17 chr10 1917748 1917986 -138398779 - L2 LINE L2 -2740 574 289 1432 247 31 3 chr10 1919667 1920019 -138396746 + MLT1A1 LTR MaLR 1 362 -3 1857 145 16 10 chr10 1920797 1920865 -138395900 - AluSx SINE Alu 0 589 523 1114 47 0 62 chr10 1920865 1921057 -138395708 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1857 145 16 10 chr10 1921057 1921384 -138395381 - AluSx SINE Alu -66 523 1 21 0 0 0 chr10 1923233 1923254 -138393511 + AT_rich Low_complexity Low_complexity 1 21 0 1935 174 12 26 chr10 1923254 1923678 -138393087 - L1MA7 LINE L1 0 6291 5874 2004 116 17 33 chr10 1923964 1924265 -138392500 + AluJb SINE Alu 3 298 -14 232 309 0 0 chr10 1924579 1924663 -138392102 + (TA)n Simple_repeat Simple_repeat 2 85 0 1471 134 138 79 chr10 1925226 1925517 -138391248 - AluJb SINE Alu -4 308 1 351 286 64 26 chr10 1925887 1926153 -138390612 + MLT1H LTR MaLR 72 347 -202 263 116 0 0 chr10 1926239 1926282 -138390483 + MLT1H LTR MaLR 485 527 -22 253 359 0 9 chr10 1926577 1926683 -138390082 + MLT1-int LTR MaLR 441 545 -826 210 71 0 0 chr10 1928550 1928578 -138388187 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 389 300 47 107 chr10 1929087 1929387 -138387378 + L1ME3 LINE L1 248 529 -6078 1203 284 55 22 chr10 1929470 1930105 -138386660 + L1ME1 LINE L1 5506 6161 -5 978 236 28 31 chr10 1930113 1930486 -138386279 + L1ME3 LINE L1 1741 2212 -4395 343 343 76 4 chr10 1930491 1930742 -138386023 + L1ME3 LINE L1 2238 2506 -4101 2190 285 90 32 chr10 1930757 1930794 -138385971 + L1ME3 LINE L1 3696 3729 -2697 1850 124 16 0 chr10 1930794 1931052 -138385713 + AluSq SINE Alu 34 295 -18 2190 285 90 32 chr10 1931052 1932777 -138383988 + L1ME3 LINE L1 3729 5560 -866 937 231 25 32 chr10 1932847 1933163 -138383602 + L1ME3 LINE L1 5573 5886 -558 25 51 0 0 chr10 1933324 1933363 -138383402 + AT_rich Low_complexity Low_complexity 1 39 0 6074 137 7 1 chr10 1933380 1934596 -138382169 - L1PB1 LINE L1 -1 6150 4925 790 266 113 11 chr10 1934597 1934950 -138381815 + L1ME3 LINE L1 6036 6424 -18 2477 70 0 0 chr10 1935180 1935481 -138381284 - AluY SINE Alu -10 301 1 28 48 0 0 chr10 1935695 1935737 -138381028 + AT_rich Low_complexity Low_complexity 1 42 0 494 31 16 0 chr10 1936596 1936660 -138380105 + (TTCC)n Simple_repeat Simple_repeat 4 68 0 236 337 18 6 chr10 1936871 1937034 -138379731 - L1MCc LINE L1 -5098 1325 1161 2255 93 7 0 chr10 1937719 1938008 -138378757 - AluSx SINE Alu -21 291 1 562 240 0 0 chr10 1938764 1938893 -138377872 - L1PB4 LINE L1 -5 6151 6023 249 196 0 0 chr10 1939079 1939130 -138377635 + (TATATG)n Simple_repeat Simple_repeat 4 54 0 39 22 0 0 chr10 1939931 1939977 -138376788 + AT_rich Low_complexity Low_complexity 1 46 0 226 188 62 10 chr10 1990348 1990444 -138326321 + (CCGCG)n Simple_repeat Simple_repeat 1 101 0 322 328 95 43 chr10 1990457 1990710 -138326055 + L1M2 LINE L1 537 802 -6047 2120 129 8 6 chr10 1990772 1991128 -138325637 + MER4D LTR ERV1 547 903 0 1176 134 18 80 chr10 1991232 1991456 -138325309 + AluJb SINE Alu 82 291 -21 486 75 0 0 chr10 1991457 1991524 -138325241 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 514 300 57 17 chr10 1991762 1992062 -138324703 - L1ME3A LINE L1 -301 5869 5558 368 320 22 67 chr10 1992077 1992130 -138324635 - L1ME3A LINE L1 -875 5271 5217 2048 115 7 3 chr10 1992130 1992416 -138324349 - AluSq SINE Alu -26 287 1 368 320 22 67 chr10 1992416 1992587 -138324178 - L1ME3A LINE L1 -929 5217 5057 336 48 0 0 chr10 1992688 1992730 -138324035 + (TG)n Simple_repeat Simple_repeat 2 43 0 251 319 39 16 chr10 1992765 1992947 -138323818 - L1ME3A LINE L1 -1199 4947 4762 21 0 0 0 chr10 1993099 1993120 -138323645 + AT_rich Low_complexity Low_complexity 1 21 0 523 86 0 0 chr10 1993167 1993237 -138323528 - U6 snRNA snRNA 0 107 38 281 314 88 10 chr10 1993239 1993443 -138323322 - L1ME3A LINE L1 -1369 4777 4558 409 276 113 33 chr10 1993447 1993748 -138323017 - L1ME3A LINE L1 -2458 3688 3364 993 259 82 22 chr10 1993794 1994600 -138322165 - L1M4 LINE L1 -1390 5254 4362 356 137 0 82 chr10 1994725 1994798 -138321967 - MSTD LTR MaLR -328 68 2 249 233 0 0 chr10 1994799 1994859 -138321906 - L1P LINE L1 -2351 3795 3736 32 43 0 0 chr10 1994894 1994940 -138321825 + AT_rich Low_complexity Low_complexity 1 46 0 804 276 46 39 chr10 1995037 1995287 -138321478 - L1M4 LINE L1 -4543 2103 1847 222 37 0 0 chr10 1995287 1995314 -138321451 + (TTTC)n Simple_repeat Simple_repeat 4 30 0 804 276 46 39 chr10 1995314 1995497 -138321268 - L1M4 LINE L1 -4799 1847 1667 * 1769 272 25 53 chr10 1995494 1996251 -138320514 - L1M4 LINE L1 -5794 748 13 234 0 71 24 chr10 1996311 1996353 -138320412 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 475 316 67 98 chr10 1998034 1998275 -138318490 + HAL1 LINE L1 22 269 -2238 1721 177 17 7 chr10 1998275 1998574 -138318191 + AluJb SINE Alu 3 304 -8 475 316 67 98 chr10 1998574 1998675 -138318090 + HAL1 LINE L1 269 372 -2135 1183 246 33 87 chr10 1998675 1999225 -138317540 + MLT2B1 LTR ERVL 1 520 0 475 316 67 98 chr10 1999225 1999419 -138317346 + HAL1 LINE L1 372 542 -1965 300 339 62 14 chr10 1999499 1999791 -138316974 + HAL1 LINE L1 630 935 -1572 781 167 24 0 chr10 1999800 1999926 -138316839 + AluJb SINE Alu 136 264 -48 225 0 0 0 chr10 1999927 1999952 -138316813 + (GA)n Simple_repeat Simple_repeat 2 26 0 547 278 147 42 chr10 1999961 2000089 -138316676 + HAL1 LINE L1 965 1078 -1429 2438 53 7 7 chr10 2000089 2000391 -138316374 + AluY SINE Alu 1 302 -9 547 278 147 42 chr10 2000391 2000568 -138316197 + HAL1 LINE L1 1078 1302 -1205 667 295 56 36 chr10 2000590 2000980 -138315785 + HAL1 LINE L1 1483 1880 -627 382 270 46 66 chr10 2001416 2001612 -138315153 + L1MC4a LINE L1 5574 5765 -2043 433 182 34 7 chr10 2001618 2001766 -138314999 + (TAGA)n Simple_repeat Simple_repeat 4 155 0 1196 133 0 0 chr10 2001858 2002031 -138314734 - AluSg/x SINE Alu -3 309 137 324 181 0 56 chr10 2002032 2002104 -138314661 - AluJ/FLAM SINE Alu -234 68 1 306 252 102 24 chr10 2002105 2002232 -138314533 + L1MC4a LINE L1 5843 5979 -1829 4947 37 2 0 chr10 2002589 2003179 -138313586 - LTR10C LTR ERV1 0 591 1 324 0 0 0 chr10 2004108 2004144 -138312621 + (CATA)n Simple_repeat Simple_repeat 2 37 0 635 44 0 22 chr10 2006942 2007032 -138309733 + L1PA5 LINE L1 6064 6151 -3 727 99 99 0 chr10 2007033 2007154 -138309611 + L1PA16 LINE L1 6025 6157 -9 4539 228 54 65 chr10 2007210 2008154 -138308611 - L1MC3 LINE L1 -12 7773 6820 180 0 0 0 chr10 2008154 2008174 -138308591 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 4539 228 54 65 chr10 2008174 2008313 -138308452 - L1MC3 LINE L1 -965 6820 6681 1323 161 150 29 chr10 2008313 2008587 -138308178 + AluSg1 SINE Alu 1 307 -2 4539 228 54 65 chr10 2008587 2009258 -138307507 - L1MC3 LINE L1 -1104 6681 6037 1764 176 0 23 chr10 2009780 2010087 -138306678 - AluJo SINE Alu -12 300 1 372 328 174 44 chr10 2010954 2011570 -138305195 - L1MEd LINE L1 -5218 901 206 247 329 84 16 chr10 2012048 2012358 -138304407 + L1MC4 LINE L1 7270 7600 -442 364 301 117 20 chr10 2012406 2012602 -138304163 + L1MC4 LINE L1 7687 7901 -141 189 0 0 0 chr10 2012604 2012625 -138304140 + (TA)n Simple_repeat Simple_repeat 1 21 0 209 225 28 14 chr10 2012662 2012733 -138304032 + GA-rich Low_complexity Low_complexity 1 72 0 21 57 0 0 chr10 2012807 2012842 -138303923 + AT_rich Low_complexity Low_complexity 1 35 0 608 326 80 32 chr10 2012985 2013379 -138303386 - L2 LINE L2 -1 3312 2890 935 84 0 53 chr10 2013379 2013569 -138303196 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 608 326 80 32 chr10 2013569 2013647 -138303118 - L2 LINE L2 -423 2890 2817 219 350 8 26 chr10 2013769 2013886 -138302879 - MER5B DNA MER1_type -60 118 4 330 234 215 24 chr10 2013913 2014118 -138302647 - L2 LINE L2 -534 2780 2537 1192 252 22 11 chr10 2014155 2014520 -138302245 + MLT1A2 LTR MaLR 6 374 0 337 288 123 6 chr10 2014527 2014690 -138302075 - L2 LINE L2 -803 2511 2330 509 96 0 48 chr10 2015976 2016008 -138300757 + MADE1 DNA Mariner 2 34 -46 2376 78 0 44 chr10 2016008 2016328 -138300437 - AluY SINE Alu -5 306 1 509 96 0 48 chr10 2016328 2016378 -138300387 + MADE1 DNA Mariner 34 80 0 225 354 50 43 chr10 2016524 2016685 -138300080 + MIR SINE MIR 76 237 -25 2134 113 0 0 chr10 2018142 2018424 -138298341 - AluSx SINE Alu -30 282 1 329 287 21 64 chr10 2020027 2020215 -138296550 + L2 LINE L2 3031 3210 -103 2624 77 34 0 chr10 2020933 2021284 -138295481 + THE1B LTR MaLR 1 363 -1 627 235 92 0 chr10 2023467 2023620 -138293145 + MER5A DNA MER1_type 4 170 -19 186 43 0 0 chr10 2024361 2024384 -138292381 + (TTC)n Simple_repeat Simple_repeat 2 24 0 905 200 0 6 chr10 2025043 2025218 -138291547 + AluJb SINE Alu 137 310 -2 22 35 0 0 chr10 2026835 2026864 -138289901 + AT_rich Low_complexity Low_complexity 1 29 0 4168 185 39 22 chr10 2026871 2027671 -138289094 - L1MA6 LINE L1 -1 6299 5483 2041 125 3 29 chr10 2027671 2027984 -138288781 - AluSx SINE Alu -7 305 1 4168 185 39 22 chr10 2027984 2028032 -138288733 - L1MA6 LINE L1 -817 5483 5437 2305 137 91 10 chr10 2028178 2028572 -138288193 - MSTB LTR MaLR 0 426 1 256 0 0 71 chr10 2031100 2031142 -138285623 + (TTTTTA)n Simple_repeat Simple_repeat 2 40 0 2055 140 156 11 chr10 2031153 2031525 -138285240 + MSTA LTR MaLR 2 427 -1 1491 196 11 0 chr10 2031525 2031801 -138284964 - AluJb SINE Alu -33 279 1 22 0 0 0 chr10 2032729 2032751 -138284014 + AT_rich Low_complexity Low_complexity 1 22 0 924 252 133 44 chr10 2032808 2033400 -138283365 + MER114 LTR ERV 1 645 -3 1595 216 54 43 chr10 2033570 2034014 -138282751 - MSTB2 LTR MaLR -2 455 7 1223 229 107 33 chr10 2034369 2034705 -138282060 - MLT1A2 LTR MaLR -13 361 1 387 330 45 6 chr10 2035766 2035942 -138280823 + L2 LINE L2 2229 2411 -903 451 205 25 19 chr10 2036006 2036167 -138280598 + CT-rich Low_complexity Low_complexity 2 163 0 518 304 136 50 chr10 2036238 2036887 -138279878 + L2 LINE L2 2587 3285 -28 1152 196 31 13 chr10 2037388 2037612 -138279153 - MLT1A1 LTR MaLR -2 363 136 426 205 0 0 chr10 2037621 2037704 -138279061 - MLT1A1 LTR MaLR -171 194 112 1010 177 15 35 chr10 2037710 2037908 -138278857 - MLT1A1 LTR MaLR -171 194 1 1348 231 54 0 chr10 2037925 2038276 -138278489 - L1MC3 LINE L1 0 7785 7416 * 2134 245 52 60 chr10 2038273 2038996 -138277769 - L1MC3 LINE L1 -1098 6687 5971 1551 184 33 23 chr10 2038996 2039295 -138277470 - AluJb SINE Alu -10 302 1 2134 245 52 60 chr10 2039295 2039490 -138277275 - L1MC3 LINE L1 -1814 5971 5776 2795 178 20 79 chr10 2039752 2040400 -138276365 + LTR9 LTR ERV1 3 612 0 2037 119 1 48 chr10 2040658 2041192 -138275573 - MER4A LTR ERV1 0 664 1 3610 163 16 21 chr10 2042192 2042932 -138273833 + LTR1B LTR ERV1 1 826 0 30 45 0 0 chr10 2044413 2044457 -138272308 + AT_rich Low_complexity Low_complexity 1 44 0 1297 185 30 26 chr10 2046051 2046179 -138270586 + AluJo SINE Alu 1 127 -185 185 83 28 0 chr10 2046179 2046215 -138270550 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 1297 185 30 26 chr10 2046215 2046388 -138270377 + AluJo SINE Alu 127 303 -9 2119 190 33 13 chr10 2047003 2047397 -138269368 + MER57A LTR ERV1 1 402 -1 24 0 0 0 chr10 2048140 2048164 -138268601 + AT_rich Low_complexity Low_complexity 1 24 0 704 196 42 0 chr10 2048373 2048516 -138268249 - L1MB1 LINE L1 -1 6167 6019 855 161 0 60 chr10 2048570 2048769 -138267996 + L1MA4 LINE L1 6108 6294 -6 285 344 0 0 chr10 2048849 2048942 -138267823 - MIR SINE MIR -64 144 52 222 164 49 16 chr10 2049464 2049525 -138267240 + (CATAA)n Simple_repeat Simple_repeat 3 65 0 239 311 118 7 chr10 2049537 2049672 -138267093 - MIR SINE MIR -3 259 110 989 138 20 31 chr10 2049717 2049912 -138266853 - L1MA4 LINE L1 0 6300 6108 1955 53 0 0 chr10 2049922 2050150 -138266615 + L1PA5 LINE L1 5927 6154 0 728 201 49 0 chr10 2050198 2050342 -138266423 + L1MB1 LINE L1 6017 6167 -1 1223 207 48 42 chr10 2050344 2050721 -138266044 - MLT1D LTR MaLR -106 399 21 764 206 12 0 chr10 2050738 2050908 -138265857 + L1MC1 LINE L1 4727 4898 -1248 1392 301 52 7 chr10 2050910 2051504 -138265261 - L1M4 LINE L1 -1384 4762 4142 315 379 15 15 chr10 2052973 2053242 -138263523 - ERVL LTR ERVL -2260 3504 3236 212 0 36 0 chr10 2053508 2053536 -138263229 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 27 49 0 0 chr10 2055933 2055974 -138260791 + AT_rich Low_complexity Low_complexity 1 41 0 652 200 205 0 chr10 2056400 2056595 -138260170 - MER46A DNA MER2_type 0 236 2 914 153 10 89 chr10 2057060 2057263 -138259502 + AluJb SINE Alu 121 307 -5 5530 174 26 17 chr10 2057263 2057671 -138259094 + L1MC1 LINE L1 5207 5610 -723 2007 212 15 5 chr10 2057671 2058062 -138258703 + MSTD LTR MaLR 2 396 0 5530 174 26 17 chr10 2058062 2058762 -138258003 + L1MC1 LINE L1 5610 6328 -5 837 214 0 6 chr10 2059191 2059359 -138257406 - MER44D DNA MER2_type 0 705 539 1218 218 29 39 chr10 2059476 2059783 -138256982 + MLT2B3 LTR ERVL 251 554 0 * 2029 221 0 3 chr10 2059783 2060160 -138256605 - MER44D DNA MER2_type -166 439 9 800 363 148 9 chr10 2060411 2061249 -138255516 + L2 LINE L2 1716 2669 -645 683 250 51 21 chr10 2061269 2061534 -138255231 + MER58 DNA MER1_type 18 2384 -36 1910 139 30 3 chr10 2061538 2061833 -138254932 - AluSx SINE Alu -9 303 1 286 224 142 30 chr10 2061894 2062028 -138254737 + L2 LINE L2 2653 2801 -513 190 301 124 42 chr10 2062164 2062201 -138254564 + L2 LINE L2 2804 2837 -476 1077 229 47 28 chr10 2062201 2062564 -138254201 - MLT1A2 LTR MaLR -4 370 1 190 301 124 42 chr10 2062564 2062945 -138253820 + L2 LINE L2 2837 3298 -15 225 346 77 10 chr10 2064117 2064221 -138252544 + L2 LINE L2 3162 3272 0 722 188 33 12 chr10 2064395 2064565 -138252200 + MLT1A1 LTR MaLR 215 405 -4 21 0 0 0 chr10 2064919 2064940 -138251825 + AT_rich Low_complexity Low_complexity 1 21 0 1250 183 57 103 chr10 2065058 2065359 -138251406 + AluJb SINE Alu 2 288 -14 2090 128 3 7 chr10 2065944 2066242 -138250523 + AluSx SINE Alu 14 310 -2 22 0 0 0 chr10 2066951 2066973 -138249792 + AT_rich Low_complexity Low_complexity 1 22 0 252 168 69 46 chr10 2067931 2068104 -138248661 + (AAGTG)n Simple_repeat Simple_repeat 4 180 0 355 254 58 96 chr10 2068272 2068387 -138248378 + L1ME3 LINE L1 5865 5983 -187 2301 101 10 0 chr10 2068387 2068693 -138248072 + AluSx SINE Alu 1 309 -3 355 254 58 96 chr10 2068693 2068881 -138247884 + L1ME3 LINE L1 5983 6170 0 228 200 0 0 chr10 2070477 2070547 -138246218 + (TA)n Simple_repeat Simple_repeat 1 70 0 186 337 61 18 chr10 2071432 2071595 -138245170 + MIR SINE MIR 23 192 -70 208 219 78 16 chr10 2071636 2071700 -138245065 + L3 LINE CR1 206 273 -1304 1817 168 21 71 chr10 2071773 2072155 -138244610 + THE1B LTR MaLR 1 363 -1 2087 273 41 19 chr10 2072632 2073361 -138243404 - L1ME1 LINE L1 -4 6162 5418 216 336 14 41 chr10 2073720 2073780 -138242985 - MIR SINE MIR -10 252 192 2172 125 7 0 chr10 2073780 2074076 -138242689 - AluSx SINE Alu -14 298 1 216 336 14 41 chr10 2074076 2074161 -138242604 - MIR SINE MIR -70 192 111 22 0 0 0 chr10 2074209 2074231 -138242534 + AT_rich Low_complexity Low_complexity 1 22 0 1294 222 34 54 chr10 2075432 2075910 -138240855 - L1M4 LINE L1 -2927 3219 2752 3312 247 84 38 chr10 2075912 2077802 -138238963 + L1MC/D LINE L1 3729 5716 -766 1242 146 6 1 chr10 2077903 2080204 -138236561 - ALR/Alpha Satellite centromeric 0 2313 1 1217 159 10 1 chr10 2080304 2083543 -138233222 - ALR/Alpha Satellite centromeric 0 3268 1 1469 201 99 3 chr10 2084544 2084877 -138231888 + MLT1A1 LTR MaLR 1 365 0 233 206 0 15 chr10 2085473 2085541 -138231224 + CT-rich Low_complexity Low_complexity 5 71 0 493 355 37 25 chr10 2086077 2086401 -138230364 + L1MEc LINE L1 45 372 -6024 368 284 133 33 chr10 2086745 2086956 -138229809 + L1MEc LINE L1 786 1017 -5379 1931 286 119 53 chr10 2086982 2088160 -138228605 + L1MCc LINE L1 17 1307 -5116 1988 151 14 0 chr10 2088160 2088451 -138228314 - AluSx SINE Alu -17 295 1 1931 286 119 53 chr10 2088451 2088697 -138228068 + L1MCc LINE L1 1307 1535 -4888 303 336 7 14 chr10 2088722 2088868 -138227897 + L1MCc LINE L1 1552 1696 -5245 922 256 49 47 chr10 2089103 2089536 -138227229 + L1M4 LINE L1 4597 5033 -1113 2815 22 0 10 chr10 2089536 2089850 -138226915 + AluY SINE Alu 1 311 0 922 256 49 47 chr10 2089850 2089927 -138226838 + L1M4 LINE L1 5033 5108 -1038 2441 147 18 35 chr10 2090199 2090581 -138226184 + MSTA LTR MaLR 1 388 -40 2269 104 3 0 chr10 2090581 2090870 -138225895 + AluSp SINE Alu 1 290 -23 306 0 0 0 chr10 2090873 2090907 -138225858 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 2441 147 18 35 chr10 2090907 2090955 -138225810 + MSTA LTR MaLR 390 428 0 228 283 0 0 chr10 2091232 2091292 -138225473 + L2 LINE L2 3254 3313 0 363 167 0 0 chr10 2092223 2092283 -138224482 - L1MA5 LINE L1 -220 6080 6021 1215 118 10 20 chr10 2092301 2092505 -138224260 + L1MA5 LINE L1 6095 6296 -4 208 364 39 34 chr10 2093167 2093373 -138223392 + L3 LINE CR1 249 455 -1122 27 73 0 0 chr10 2093897 2093952 -138222813 + AT_rich Low_complexity Low_complexity 1 55 0 1222 229 85 15 chr10 2094752 2095154 -138221611 + MER31B LTR ERV1 1 430 -36 344 233 282 6 chr10 2096285 2096448 -138220317 - L1MC4 LINE L1 -1115 6927 6720 366 231 8 34 chr10 2098053 2098170 -138218595 + MIR SINE MIR 12 125 -137 347 286 44 20 chr10 2098324 2098527 -138218238 - L2 LINE L2 -1391 1923 1716 225 194 11 43 chr10 2098537 2098630 -138218135 + (TG)n Simple_repeat Simple_repeat 2 91 0 4998 213 37 25 chr10 2100833 2102398 -138214367 - L1MC1 LINE L1 -18 6298 4720 238 248 0 59 chr10 2102397 2102498 -138214267 - L1MC1 LINE L1 -1817 4312 4218 * 586 122 0 0 chr10 2102738 2102820 -138213945 + AluSg/x SINE Alu 212 293 -17 1439 234 30 55 chr10 2103106 2103581 -138213184 + MLT1C LTR MaLR 5 467 0 183 315 36 27 chr10 2103999 2104110 -138212655 - MIR3 SINE MIR -28 180 69 293 250 40 0 chr10 2104499 2104575 -138212190 + MER45A DNA AcHobo 99 177 -1 534 290 106 65 chr10 2106581 2106734 -138210031 - L1MC1 LINE L1 -4929 1381 1236 367 19 19 19 chr10 2106734 2106787 -138209978 + (CA)n Simple_repeat Simple_repeat 2 54 0 534 290 106 65 chr10 2106787 2107441 -138209324 - L1MC1 LINE L1 -5074 1236 520 22 56 0 0 chr10 2107846 2107882 -138208883 + AT_rich Low_complexity Low_complexity 1 36 0 334 207 49 12 chr10 2108024 2108106 -138208659 + LTR16A LTR ERVL 53 137 -313 250 269 34 42 chr10 2108210 2108329 -138208436 + LTR16A LTR ERVL 303 420 -30 1892 168 0 13 chr10 2108734 2109032 -138207733 + AluSx SINE Alu 1 294 -18 22 80 0 0 chr10 2109812 2109862 -138206903 + AT_rich Low_complexity Low_complexity 1 50 0 1733 71 0 0 chr10 2109942 2110153 -138206612 - AluY SINE Alu -18 293 83 405 174 23 23 chr10 2110154 2110240 -138206525 + MLT1A2 LTR MaLR 127 212 -162 2054 118 0 57 chr10 2110253 2110567 -138206198 + AluSx SINE Alu 3 298 -14 376 341 32 23 chr10 2110631 2110848 -138205917 + MIR SINE MIR 44 262 0 565 222 98 31 chr10 2111350 2111544 -138205221 + MER3 DNA MER1_type 3 209 0 1762 122 34 27 chr10 2111857 2112152 -138204613 - AluSx SINE Alu -15 297 1 25 0 0 0 chr10 2113955 2113980 -138202785 + AT_rich Low_complexity Low_complexity 1 25 0 850 194 61 116 chr10 2114341 2114737 -138202028 - MLT1A2 LTR MaLR 0 374 1 687 299 119 13 chr10 2115411 2115799 -138200966 + MLT1G LTR MaLR 68 496 -94 914 300 35 25 chr10 2116408 2116811 -138199954 - MLT1I LTR MaLR -2 407 1 23 0 0 0 chr10 2117139 2117162 -138199603 + AT_rich Low_complexity Low_complexity 1 23 0 220 203 0 86 chr10 2118641 2118838 -138197927 + (GTGTG)n Simple_repeat Simple_repeat 1 180 0 295 294 0 0 chr10 2119129 2119214 -138197551 - MIR SINE MIR -67 141 57 609 142 20 81 chr10 2120489 2120637 -138196128 - L1M LINE L1 -775 5393 5255 251 154 0 19 chr10 2121083 2121135 -138195630 + CT-rich Low_complexity Low_complexity 1 51 0 452 271 17 0 chr10 2121475 2121593 -138195172 - L2 LINE L2 -10 3262 3143 1507 180 58 6 chr10 2121854 2121999 -138194766 - L1ME LINE L1 -712 5454 5318 276 30 0 0 chr10 2121999 2122032 -138194733 + (ATG)n Simple_repeat Simple_repeat 2 34 0 1507 180 58 6 chr10 2122032 2122288 -138194477 - L1ME LINE L1 -848 5318 5043 2934 185 100 14 chr10 2122294 2122595 -138194170 + L1MB1 LINE L1 5463 5737 -431 438 20 0 0 chr10 2122595 2122646 -138194119 + (TG)n Simple_repeat Simple_repeat 1 51 0 2934 185 100 14 chr10 2122646 2122993 -138193772 + L1MB1 LINE L1 5737 6167 -1 297 63 16 63 chr10 2123034 2123097 -138193668 + (GGA)n Simple_repeat Simple_repeat 3 62 0 300 194 0 16 chr10 2123835 2123897 -138192868 - MER31B LTR ERV1 0 466 406 2006 264 31 16 chr10 2124538 2125245 -138191520 - L1ME LINE L1 -2227 3919 3202 824 214 5 20 chr10 2125246 2125442 -138191323 - AluJo SINE Alu -1 311 119 2648 260 65 7 chr10 2125442 2126400 -138190365 - L1ME LINE L1 -2961 3185 2173 198 356 79 28 chr10 2127625 2127841 -138188924 + MIR SINE MIR 34 260 -2 396 0 0 0 chr10 2128482 2128526 -138188239 + (CA)n Simple_repeat Simple_repeat 2 45 0 237 163 0 0 chr10 2128526 2128575 -138188190 + (TA)n Simple_repeat Simple_repeat 2 50 0 2199 125 29 35 chr10 2128577 2128954 -138187811 + THE1C LTR MaLR 1 375 0 902 199 49 135 chr10 2130181 2130588 -138186177 + MLT1B LTR MaLR 1 372 -18 411 238 67 50 chr10 2131408 2131648 -138185117 - L1MC5 LINE L1 -102 7859 7616 35 0 0 0 chr10 2131848 2131883 -138184882 + AT_rich Low_complexity Low_complexity 1 35 0 25 95 0 0 chr10 2131910 2131984 -138184781 + AT_rich Low_complexity Low_complexity 1 74 0 1481 176 37 11 chr10 2133336 2133609 -138183156 - AluJo SINE Alu -32 280 1 33 0 0 0 chr10 2134845 2134878 -138181887 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr10 2137732 2137760 -138179005 + AT_rich Low_complexity Low_complexity 1 28 0 225 230 0 0 chr10 2139116 2139242 -138177523 + (TG)n Simple_repeat Simple_repeat 2 127 0 437 218 6 0 chr10 2139285 2139455 -138177310 + (TG)n Simple_repeat Simple_repeat 2 172 0 22 0 0 0 chr10 2140234 2140256 -138176509 + AT_rich Low_complexity Low_complexity 1 22 0 297 330 26 0 chr10 2140403 2140518 -138176247 + MIR SINE MIR 30 147 -61 2194 85 0 30 chr10 2142740 2143045 -138173720 + AluSc SINE Alu 1 296 -13 458 262 25 98 chr10 2143164 2143408 -138173357 - L1MC3 LINE L1 -7 7778 7553 1404 201 28 14 chr10 2143834 2144123 -138172642 + AluJo SINE Alu 1 293 -19 22 0 0 0 chr10 2144145 2144167 -138172598 + AT_rich Low_complexity Low_complexity 1 22 0 186 167 0 0 chr10 2144189 2144225 -138172540 + GA-rich Low_complexity Low_complexity 2 37 0 1962 128 6 35 chr10 2144342 2144654 -138172111 - AluSx SINE Alu -9 303 1 198 269 13 51 chr10 2145387 2145465 -138171300 + MER5A DNA MER1_type 30 104 -85 2187 140 48 28 chr10 2146678 2147035 -138169730 + THE1B LTR MaLR 1 364 0 308 281 73 83 chr10 2147726 2147905 -138168860 + L1M4 LINE L1 3784 3963 -2183 2120 133 0 3 chr10 2147905 2148213 -138168552 + AluSx SINE Alu 1 307 -5 308 281 73 83 chr10 2148213 2148417 -138168348 + L1M4 LINE L1 3963 4163 -1983 2010 274 31 15 chr10 2149063 2149775 -138166990 - L1M4 LINE L1 -1017 5129 4407 188 234 0 16 chr10 2149775 2149839 -138166926 + CT-rich Low_complexity Low_complexity 1 63 0 921 189 98 20 chr10 2149855 2149937 -138166828 - L1MB3 LINE L1 -1 6182 6108 471 96 96 0 chr10 2149937 2150010 -138166755 + MADE1 DNA Mariner 1 80 0 921 189 98 20 chr10 2150010 2150181 -138166584 - L1MB3 LINE L1 -75 6108 5909 803 148 19 39 chr10 2150811 2150966 -138165799 - L1MA4 LINE L1 -16 6284 6133 534 185 99 0 chr10 2151298 2151449 -138165316 - L1MA4 LINE L1 -169 6131 5966 25 0 0 0 chr10 2153680 2153705 -138163060 + AT_rich Low_complexity Low_complexity 1 25 0 2562 58 3 0 chr10 2153797 2154106 -138162659 + AluY SINE Alu 1 310 -1 27 0 0 0 chr10 2154204 2154231 -138162534 + AT_rich Low_complexity Low_complexity 1 27 0 869 214 6 0 chr10 2154231 2154390 -138162375 - FRAM SINE Alu -19 157 1 1835 116 0 58 chr10 2157073 2157365 -138159400 + AluSx SINE Alu 32 306 -6 1672 173 13 86 chr10 2161086 2161341 -138155424 - MER39 LTR ERV1 -3 704 487 1578 119 13 0 chr10 2161341 2161567 -138155198 + AluSx SINE Alu 58 286 -26 1672 173 13 86 chr10 2161567 2161705 -138155060 - MER39 LTR ERV1 -220 487 340 926 266 43 14 chr10 2161785 2162063 -138154702 + MLT1F LTR MaLR 1 286 -256 277 273 23 68 chr10 2163223 2163399 -138153366 + (CAGCC)n Simple_repeat Simple_repeat 5 172 0 445 205 17 0 chr10 2164292 2164409 -138152356 + (TATG)n Simple_repeat Simple_repeat 2 120 0 238 194 32 16 chr10 2164935 2164997 -138151768 + GA-rich Low_complexity Low_complexity 2 64 0 1462 170 11 11 chr10 2166572 2166866 -138149899 + AluJo SINE Alu 12 305 0 251 333 52 26 chr10 2167151 2167304 -138149461 - MIR3 SINE MIR -33 175 19 1046 198 0 0 chr10 2167496 2167678 -138149087 - Tigger5 DNA MER2_type 0 2323 2142 187 333 17 0 chr10 2168488 2168548 -138148217 + L2 LINE L2 3200 3260 -12 231 61 0 0 chr10 2169414 2169447 -138147318 + (TG)n Simple_repeat Simple_repeat 2 34 0 1219 206 59 45 chr10 2170006 2170590 -138146175 + L1MCa LINE L1 1769 2452 -3974 782 237 59 0 chr10 2170601 2170787 -138145978 + MER74A LTR ERVL 43 239 -319 23 33 0 0 chr10 2171413 2171443 -138145322 + AT_rich Low_complexity Low_complexity 1 30 0 1817 113 0 12 chr10 2171931 2172188 -138144577 - AluSg SINE Alu -17 293 40 1106 65 7 0 chr10 2172190 2172328 -138144437 - AluSq/x SINE Alu -174 139 1 37 23 0 0 chr10 2172595 2172639 -138144126 + AT_rich Low_complexity Low_complexity 1 44 0 297 308 0 0 chr10 2173083 2173174 -138143591 + (TG)n Simple_repeat Simple_repeat 1 91 0 428 316 7 0 chr10 2173188 2173343 -138143422 + (TG)n Simple_repeat Simple_repeat 2 157 0 1578 99 130 16 chr10 2173430 2173711 -138143054 - AluSg1 SINE Alu 0 310 1 3332 110 18 18 chr10 2173956 2174111 -138142654 + MER75 DNA T2_type 3 157 -357 2128 99 11 0 chr10 2174111 2174416 -138142349 - AluSp SINE Alu 0 308 1 3332 110 18 18 chr10 2174416 2174757 -138142008 + MER75 DNA T2_type 156 500 -14 333 339 17 39 chr10 2174968 2175148 -138141617 - MER5B DNA MER1_type 0 178 3 3012 126 28 16 chr10 2176805 2177312 -138139453 - MER75 DNA T2_type -1 513 1 180 0 0 0 chr10 2177607 2177627 -138139138 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 384 239 68 106 chr10 2178704 2179026 -138137739 + MLT1H LTR MaLR 230 539 -10 25 31 0 0 chr10 2179552 2179584 -138137181 + AT_rich Low_complexity Low_complexity 1 32 0 25 31 0 0 chr10 2180053 2180085 -138136680 + AT_rich Low_complexity Low_complexity 1 32 0 1779 119 0 11 chr10 2180093 2180353 -138136412 + AluSc SINE Alu 1 257 -52 1690 132 60 0 chr10 2180970 2181289 -138135476 - L1MA5A LINE L1 0 6297 5960 654 235 130 72 chr10 2182914 2183259 -138133506 + MLT1D LTR MaLR 1 365 -140 2088 108 85 18 chr10 2183591 2183932 -138132833 + THE1B LTR MaLR 1 364 0 552 185 0 0 chr10 2186392 2186484 -138130281 - AluJ/FLAM SINE Alu -220 92 1 2004 101 42 14 chr10 2187250 2187538 -138129227 + AluSx SINE Alu 1 296 -16 2309 206 37 85 chr10 2188498 2188985 -138127780 - L1MC2 LINE L1 -396 5948 5497 2051 138 10 0 chr10 2188985 2189275 -138127490 - AluSg SINE Alu -17 293 1 2309 206 37 85 chr10 2189275 2189648 -138127117 - L1MC2 LINE L1 -847 5497 5107 2273 71 0 0 chr10 2190052 2190373 -138126392 + AluY SINE Alu 1 321 0 2132 104 0 4 chr10 2190769 2191049 -138125716 - AluSq SINE Alu -34 279 1 203 363 29 0 chr10 2191163 2191265 -138125500 - MIR SINE MIR -58 204 100 1601 233 25 0 chr10 2191302 2191709 -138125056 - MER47B DNA MER2_type 0 418 2 274 243 21 95 chr10 2192240 2192483 -138124282 + L1MC5 LINE L1 7549 7773 -188 191 122 0 49 chr10 2192496 2192537 -138124228 + (GAAA)n Simple_repeat Simple_repeat 4 42 0 201 365 0 32 chr10 2193133 2193289 -138123476 + (CAATG)n Simple_repeat Simple_repeat 3 153 0 306 234 24 24 chr10 2193551 2193843 -138122922 + GA-rich Low_complexity Low_complexity 1 292 0 180 0 0 0 chr10 2194739 2194759 -138122006 + (TA)n Simple_repeat Simple_repeat 2 21 0 2191 115 0 0 chr10 2194765 2195060 -138121705 - AluSq SINE Alu -18 295 1 908 233 125 15 chr10 2195070 2195413 -138121352 - L1MC3 LINE L1 -1 7784 7404 3279 245 108 26 chr10 2195858 2197281 -138119484 - L1MC3 LINE L1 -335 7450 5919 202 314 115 32 chr10 2197542 2197698 -138119067 + L2 LINE L2 2614 2782 -532 754 194 22 0 chr10 2197717 2197856 -138118909 - FLAM_C SINE Alu 0 143 2 3966 24 0 0 chr10 2197865 2198326 -138118439 - L1PA3 LINE L1 0 6155 5695 32 26 0 0 chr10 2198388 2198427 -138118338 + AT_rich Low_complexity Low_complexity 1 39 0 296 195 23 35 chr10 2199848 2199935 -138116830 - MER53 DNA DNA -1 188 103 512 175 0 0 chr10 2200424 2200521 -138116244 - L1MA5A LINE L1 -10 6287 6191 753 239 157 11 chr10 2200970 2201250 -138115515 + MER33 DNA MER1_type 1 321 -3 1135 184 4 12 chr10 2201600 2201845 -138114920 - L1MA6 LINE L1 -1 6299 6057 295 109 0 0 chr10 2201870 2201916 -138114849 + L1M2 LINE L1 5444 5489 -811 1943 106 7 3 chr10 2201922 2202253 -138114512 + AluSx SINE Alu 1 332 0 529 329 112 47 chr10 2202744 2203578 -138113187 + L1M4 LINE L1 2225 3112 -3034 1779 106 13 0 chr10 2203757 2203992 -138112773 + AluSx SINE Alu 64 301 -11 424 287 103 0 chr10 2204278 2204414 -138112351 + MIR SINE MIR 4 153 -109 323 322 44 16 chr10 2206361 2206544 -138110221 - MER46C DNA MER2_type -46 292 105 298 176 22 33 chr10 2206820 2206911 -138109854 + (TA)n Simple_repeat Simple_repeat 1 90 0 28 61 0 0 chr10 2206946 2206995 -138109770 + AT_rich Low_complexity Low_complexity 1 49 0 302 136 64 16 chr10 2207007 2207132 -138109633 + (TA)n Simple_repeat Simple_repeat 1 131 0 297 133 20 41 chr10 2207171 2207269 -138109496 + (TA)n Simple_repeat Simple_repeat 1 96 0 395 196 68 7 chr10 2207283 2207551 -138109214 + (TA)n Simple_repeat Simple_repeat 1 284 0 24 32 0 0 chr10 2207677 2207708 -138109057 + AT_rich Low_complexity Low_complexity 1 31 0 243 61 0 0 chr10 2209452 2209485 -138107280 + (CAT)n Simple_repeat Simple_repeat 1 33 0 1428 250 57 38 chr10 2209622 2210758 -138106007 + L1MCb LINE L1 475 1638 -4885 1815 142 40 7 chr10 2210758 2211054 -138105711 + AluSx SINE Alu 1 306 -6 1428 250 57 38 chr10 2211054 2211090 -138105675 + L1MCb LINE L1 1638 1672 -4851 1246 222 104 21 chr10 2211088 2211567 -138105198 + L1M4 LINE L1 5312 5828 -346 * 2298 222 12 42 chr10 2211574 2212219 -138104546 - L1 LINE L1 -3311 2835 2210 219 338 95 0 chr10 2212586 2212660 -138104105 - L2 LINE L2 -38 3234 3154 258 254 0 0 chr10 2213582 2213649 -138103116 + (TG)n Simple_repeat Simple_repeat 2 68 0 1638 177 0 38 chr10 2213886 2214203 -138102562 + AluJo SINE Alu 1 305 -7 23 33 0 0 chr10 2214269 2214299 -138102466 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr10 2215267 2215297 -138101468 + AT_rich Low_complexity Low_complexity 1 30 0 7852 13 7 0 chr10 2217503 2218524 -138098241 - L1PA2 LINE L1 0 6155 5133 5001 191 32 20 chr10 2221197 2222776 -138093989 + L1MC1 LINE L1 4732 6331 -2 315 216 0 0 chr10 2222793 2222867 -138093898 + AluJ/FRAM SINE Alu 228 301 -1 27 0 0 0 chr10 2223640 2223667 -138093098 + AT_rich Low_complexity Low_complexity 1 27 0 22 35 0 0 chr10 2223706 2223735 -138093030 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr10 2224003 2224041 -138092724 + AT_rich Low_complexity Low_complexity 1 38 0 305 307 135 5 chr10 2224868 2225083 -138091682 + MLT1J1 LTR MaLR 202 444 -2 290 314 44 7 chr10 2225548 2225685 -138091080 + MLT1J2 LTR MaLR 47 188 -262 26 30 0 0 chr10 2225899 2225932 -138090833 + AT_rich Low_complexity Low_complexity 1 33 0 1947 104 11 31 chr10 2226232 2226519 -138090246 - AluSg SINE Alu -3 307 27 280 179 0 0 chr10 2226608 2226664 -138090101 - MER4-int LTR ERV1 -5431 1167 1112 212 196 62 21 chr10 2226667 2226764 -138090001 + (CATG)n Simple_repeat Simple_repeat 2 102 0 * 354 297 0 0 chr10 2226744 2226889 -138089876 + (CA)n Simple_repeat Simple_repeat 1 145 0 398 286 183 43 chr10 2228230 2228765 -138088000 + L2 LINE L2 2366 2975 -339 189 333 10 62 chr10 2228983 2229079 -138087686 + L2 LINE L2 3142 3232 -40 898 246 36 70 chr10 2229829 2230186 -138086579 - MLT1A2 LTR MaLR 0 374 30 21 0 0 0 chr10 2230404 2230425 -138086340 + AT_rich Low_complexity Low_complexity 1 21 0 361 168 77 0 chr10 2230566 2230721 -138086044 + (TA)n Simple_repeat Simple_repeat 1 167 0 299 333 33 39 chr10 2231278 2231614 -138085151 + L1ME4a LINE L1 5540 5873 -248 2164 144 44 47 chr10 2231946 2232329 -138084436 + MER83 LTR ERV1 1 382 -66 26 0 0 0 chr10 2232329 2232355 -138084410 + AT_rich Low_complexity Low_complexity 1 26 0 1207 211 20 56 chr10 2232539 2232894 -138083871 - MLT1A1 LTR MaLR 0 365 24 752 208 119 36 chr10 2233860 2234054 -138082711 - L1MDb LINE L1 -5342 1201 972 2335 113 52 19 chr10 2234054 2234417 -138082348 + THE1C LTR MaLR 1 375 0 752 208 119 36 chr10 2234417 2234525 -138082240 - L1MDb LINE L1 -5571 972 874 327 286 112 29 chr10 2234733 2234939 -138081826 - L1MDb LINE L1 -6146 394 172 1114 58 0 0 chr10 2234979 2235116 -138081649 + AluY SINE Alu 172 308 -3 26 30 0 0 chr10 2235833 2235866 -138080899 + AT_rich Low_complexity Low_complexity 1 33 0 256 314 8 40 chr10 2235919 2236043 -138080722 - L1MEc LINE L1 -4646 1750 1631 2403 74 3 7 chr10 2237147 2237457 -138079308 - AluY SINE Alu -2 309 1 1919 136 0 3 chr10 2238469 2238756 -138078009 + AluSx SINE Alu 23 308 -4 21 57 0 0 chr10 2238829 2238864 -138077901 + AT_rich Low_complexity Low_complexity 1 35 0 663 223 54 45 chr10 2240021 2240263 -138076502 + LTR40a LTR ERVL 212 512 -7 592 255 74 10 chr10 2241485 2241730 -138075035 - MIR SINE MIR 0 262 3 21 0 0 0 chr10 2242381 2242402 -138074363 + AT_rich Low_complexity Low_complexity 1 21 0 2172 114 0 3 chr10 2244080 2244369 -138072396 - AluSx SINE Alu -24 288 1 207 257 239 0 chr10 2244427 2244536 -138072229 - MIR SINE MIR -46 216 82 203 367 73 0 chr10 2244859 2244968 -138071797 - MIR SINE MIR -111 151 35 22 109 0 0 chr10 2245680 2245772 -138070993 + AT_rich Low_complexity Low_complexity 1 92 0 715 261 30 0 chr10 2245927 2246126 -138070639 - L1MC3 LINE L1 -21 7764 7560 2101 184 49 11 chr10 2246137 2246588 -138070177 + MER50 LTR ERV1 12 479 -255 1649 113 8 0 chr10 2246723 2246961 -138069804 + MER50 LTR ERV1 463 702 -32 2249 243 57 16 chr10 2246971 2247658 -138069107 - L1MC3 LINE L1 -221 7564 6850 317 222 10 0 chr10 2247707 2247806 -138068959 + (TG)n Simple_repeat Simple_repeat 1 100 0 1680 231 110 27 chr10 2247806 2248369 -138068396 - L1MC3 LINE L1 -928 6857 6248 3570 113 21 25 chr10 2249146 2249704 -138067061 + MER4B LTR ERV1 1 556 -54 286 77 0 0 chr10 2249700 2249739 -138067026 + Alu SINE Alu 13 51 -249 * 486 211 0 46 chr10 2249753 2249862 -138066903 - LTR62 LTR ERVK -610 109 6 1434 211 97 50 chr10 2250530 2250994 -138065771 - MER66B LTR ERV1 0 486 1 1512 130 65 0 chr10 2251488 2251704 -138065061 - MER30 DNA MER1_type 0 230 1 23 33 0 0 chr10 2253150 2253180 -138063585 + AT_rich Low_complexity Low_complexity 1 30 0 236 321 131 0 chr10 2253188 2253325 -138063440 + L1M4 LINE L1 3731 3885 -2261 252 0 0 0 chr10 2253680 2253708 -138063057 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 433 244 0 0 chr10 2253986 2254072 -138062693 - U6 snRNA snRNA -19 88 3 606 239 100 13 chr10 2254074 2254304 -138062461 + MLT2D LTR ERVL 100 349 -65 575 138 54 6 chr10 2254318 2254485 -138062280 + (TCTA)n Simple_repeat Simple_repeat 1 175 0 376 163 72 0 chr10 2254552 2254718 -138062047 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 509 123 71 0 chr10 2254762 2254917 -138061848 + (TCTA)n Simple_repeat Simple_repeat 1 166 0 633 121 55 0 chr10 2254987 2255152 -138061613 + (TCTA)n Simple_repeat Simple_repeat 1 174 0 2125 135 0 0 chr10 2256011 2256322 -138060443 + AluSx SINE Alu 1 311 -1 1298 247 34 29 chr10 2256359 2256739 -138060026 - MLT1B LTR MaLR -8 382 1 362 285 125 0 chr10 2257803 2257947 -138058818 + LTR16C LTR ERVL 88 249 -242 323 259 74 53 chr10 2257952 2258141 -138058624 + L1ME3A LINE L1 5965 6157 -13 21 0 0 0 chr10 2258142 2258163 -138058602 + AT_rich Low_complexity Low_complexity 1 21 0 2804 115 0 0 chr10 2259079 2259443 -138057322 - THE1B LTR MaLR 0 364 1 25 0 0 0 chr10 2259676 2259701 -138057064 + AT_rich Low_complexity Low_complexity 1 25 0 2390 79 0 3 chr10 2261227 2261532 -138055233 - AluY SINE Alu -7 304 1 226 163 0 20 chr10 2261696 2261745 -138055020 + A-rich Low_complexity Low_complexity 1 48 0 22 0 0 0 chr10 2262452 2262474 -138054291 + AT_rich Low_complexity Low_complexity 1 22 0 2319 136 101 20 chr10 2262689 2263085 -138053680 + MSTA LTR MaLR 1 428 0 541 284 84 37 chr10 2263526 2263847 -138052918 - MLT1I LTR MaLR -4 405 70 232 171 57 0 chr10 2263919 2263989 -138052776 + C-rich Low_complexity Low_complexity 3 76 0 248 276 66 83 chr10 2265606 2265749 -138051016 - HAL1b LINE L1 -2 1346 1202 273 75 0 0 chr10 2265749 2265789 -138050976 + (TG)n Simple_repeat Simple_repeat 1 40 0 248 276 66 83 chr10 2265789 2266055 -138050710 - HAL1b LINE L1 -146 1202 944 1541 199 13 13 chr10 2266059 2266370 -138050395 + AluJb SINE Alu 1 311 -1 492 300 79 44 chr10 2266587 2266994 -138049771 - HAL1b LINE L1 -513 835 415 1394 45 0 6 chr10 2267094 2267273 -138049492 + (GAA)n Simple_repeat Simple_repeat 2 179 0 1593 190 16 57 chr10 2267273 2267641 -138049124 - MLT1B LTR MaLR -37 353 1 204 236 34 34 chr10 2268153 2268242 -138048523 + T-rich Low_complexity Low_complexity 2 90 0 22 35 0 0 chr10 2268782 2268811 -138047954 + AT_rich Low_complexity Low_complexity 1 29 0 198 71 0 0 chr10 2269585 2269613 -138047152 + (CA)n Simple_repeat Simple_repeat 2 29 0 297 268 65 82 chr10 2269846 2270137 -138046628 - MLT1H LTR MaLR -214 335 50 2000 194 26 11 chr10 2272031 2272413 -138044352 + MLT1B LTR MaLR 3 390 0 813 136 0 15 chr10 2272556 2272688 -138044077 + AluJo SINE Alu 5 134 -178 692 220 0 0 chr10 2276819 2276960 -138039805 + FLAM_C SINE Alu 3 143 0 1624 40 0 0 chr10 2277042 2277240 -138039525 + L1PA2 LINE L1 5958 6155 0 279 0 0 0 chr10 2277491 2277522 -138039243 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 189 0 0 0 chr10 2277873 2277894 -138038871 + (TTAA)n Simple_repeat Simple_repeat 4 24 0 1231 118 0 0 chr10 2278515 2278684 -138038081 + AluSg/x SINE Alu 131 299 -13 307 341 142 37 chr10 2279006 2279329 -138037436 + HAL1 LINE L1 1414 1770 -737 2421 81 0 3 chr10 2280014 2280322 -138036443 + AluY SINE Alu 1 307 -4 1479 291 97 15 chr10 2280563 2281411 -138035354 + L1M4b LINE L1 44 960 -5899 419 250 23 0 chr10 2281405 2281537 -138035228 - L1M4 LINE L1 -4853 1689 1555 * 228 185 0 19 chr10 2281557 2281611 -138035154 + (TA)n Simple_repeat Simple_repeat 1 53 0 268 74 0 37 chr10 2281898 2281915 -138034850 + (TA)n Simple_repeat Simple_repeat 1 17 -35 189 0 0 0 chr10 2281915 2281936 -138034829 + (GA)n Simple_repeat Simple_repeat 2 22 0 268 74 0 37 chr10 2281936 2281972 -138034793 + (TA)n Simple_repeat Simple_repeat 17 52 0 365 202 0 64 chr10 2282010 2282104 -138034661 + L1MC4 LINE L1 6616 6703 -1339 243 0 0 0 chr10 2282112 2282139 -138034626 + (GA)n Simple_repeat Simple_repeat 2 28 0 240 100 0 0 chr10 2282196 2282236 -138034529 + (TA)n Simple_repeat Simple_repeat 1 40 0 256 307 20 0 chr10 2282468 2282569 -138034196 + L1ME LINE L1 5735 5837 -333 508 103 0 13 chr10 2282617 2282695 -138034070 + MADE1 DNA Mariner 4 80 0 378 0 0 0 chr10 2282696 2282738 -138034027 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 314 239 9 0 chr10 2283372 2283481 -138033284 + (TA)n Simple_repeat Simple_repeat 1 110 0 400 333 16 58 chr10 2283546 2283829 -138032936 - L1MEd LINE L1 -4992 1078 784 305 277 27 54 chr10 2284271 2284383 -138032382 - L1MEd LINE L1 -5887 183 75 2487 81 7 0 chr10 2284961 2285269 -138031496 + AluY SINE Alu 2 311 0 302 313 21 0 chr10 2286599 2286695 -138030070 + L1ME LINE L1 5735 5832 -338 313 261 0 43 chr10 2286724 2286912 -138029853 + (TA)n Simple_repeat Simple_repeat 1 180 0 267 156 0 0 chr10 2286927 2286972 -138029793 - MSTA LTR MaLR -383 45 1 240 318 0 0 chr10 2287244 2287307 -138029458 + L2 LINE L2 2729 2791 -523 1399 165 81 0 chr10 2288194 2288430 -138028335 + AluJb SINE Alu 40 294 -18 2785 19 0 6 chr10 2288565 2288876 -138027889 + AluY SINE Alu 1 309 -2 1126 268 79 63 chr10 2290191 2290854 -138025911 - L1ME1 LINE L1 -3 6232 5524 2022 95 15 0 chr10 2290854 2291127 -138025638 - AluSp SINE Alu -35 278 2 1126 268 79 63 chr10 2291127 2291611 -138025154 - L1ME1 LINE L1 -711 5524 5049 979 316 57 35 chr10 2291642 2292229 -138024536 - L1ME1 LINE L1 -5415 981 365 1432 157 70 76 chr10 2292229 2292573 -138024192 + MER61A LTR ERV1 1 342 -1 979 316 57 35 chr10 2292573 2292903 -138023862 - L1ME1 LINE L1 -6031 365 44 30 0 0 0 chr10 2293451 2293481 -138023284 + AT_rich Low_complexity Low_complexity 1 30 0 192 111 0 0 chr10 2293508 2293544 -138023221 + (A)n Simple_repeat Simple_repeat 1 36 0 1227 179 10 5 chr10 2293813 2294020 -138022745 + AluJb SINE Alu 59 266 -46 186 209 0 0 chr10 2295143 2295186 -138021579 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 500 278 67 0 chr10 2295819 2296013 -138020752 - MER20 DNA MER1_type -7 212 6 447 19 0 0 chr10 2296355 2296407 -138020358 + (CA)n Simple_repeat Simple_repeat 2 53 0 446 170 0 10 chr10 2297609 2297709 -138019056 + (CA)n Simple_repeat Simple_repeat 2 100 0 290 243 100 67 chr10 2297914 2298086 -138018679 + L1MA9 LINE L1 6058 6240 -72 204 40 0 0 chr10 2298086 2298111 -138018654 + (TA)n Simple_repeat Simple_repeat 2 26 0 290 243 100 67 chr10 2298111 2298148 -138018617 + L1MA9 LINE L1 6240 6274 -38 216 0 0 0 chr10 2300091 2300115 -138016650 + (T)n Simple_repeat Simple_repeat 1 24 0 200 293 0 27 chr10 2301556 2301631 -138015134 + (CATATA)n Simple_repeat Simple_repeat 3 75 0 323 322 91 34 chr10 2302059 2302323 -138014442 - L1M4 LINE L1 -1377 4769 4491 199 349 24 0 chr10 2302499 2302582 -138014183 - MIR SINE MIR -103 105 21 321 287 83 26 chr10 2303034 2303264 -138013501 - LTR43 LTR ERV1 -167 435 193 249 218 0 68 chr10 2306521 2306668 -138010097 + (TGG)n Simple_repeat Simple_repeat 2 138 0 365 145 0 58 chr10 2306680 2306852 -138009913 + (TGG)n Simple_repeat Simple_repeat 2 163 0 377 275 41 35 chr10 2308547 2308718 -138008047 + MIR SINE MIR 81 252 -10 21 36 0 0 chr10 2309129 2309157 -138007608 + AT_rich Low_complexity Low_complexity 1 28 0 414 302 122 12 chr10 2309603 2309848 -138006917 + MER69 DNA AcHobo 25 296 -2230 988 266 128 38 chr10 2310005 2310670 -138006095 - MER50 LTR ERV1 0 734 10 581 265 160 19 chr10 2310857 2311276 -138005489 + MER69 DNA AcHobo 2049 2526 0 712 228 106 5 chr10 2311339 2311528 -138005237 + MER58A DNA MER1_type 2 209 -15 25 31 0 0 chr10 2312106 2312138 -138004627 + AT_rich Low_complexity Low_complexity 1 32 0 3563 84 18 2 chr10 2313336 2313836 -138002929 - MER41A LTR ERV1 -46 508 1 2201 127 0 6 chr10 2314627 2314942 -138001823 + AluSq SINE Alu 1 313 0 380 250 0 46 chr10 2315298 2315406 -138001359 - MIR SINE MIR 0 262 160 2384 134 10 63 chr10 2315411 2315890 -138000875 + MER4D LTR ERV1 1 454 -418 1170 54 0 0 chr10 2315900 2316047 -138000718 - L1PA4 LINE L1 -3 6152 6006 1824 163 3 3 chr10 2316494 2316815 -137999950 - AluSx SINE Alu 0 312 1 2527 128 49 2 chr10 2316966 2317374 -137999391 - MSTA LTR MaLR -1 427 1 1054 249 92 12 chr10 2318105 2318531 -137998234 - MLT1C LTR MaLR -7 460 1 1292 213 66 3 chr10 2319097 2319417 -137997348 + MLT1B LTR MaLR 7 346 -44 325 217 0 0 chr10 2319421 2319490 -137997275 + MLT1B LTR MaLR 315 383 -7 629 155 17 17 chr10 2319768 2319884 -137996881 + FLAM_C SINE Alu 1 116 -17 207 0 0 0 chr10 2319900 2319923 -137996842 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 459 0 0 0 chr10 2319925 2319976 -137996789 + (TA)n Simple_repeat Simple_repeat 2 52 0 211 244 0 0 chr10 2319979 2320020 -137996745 + MIR SINE MIR 113 153 -109 852 140 110 0 chr10 2320685 2320887 -137995878 - AluSg/x SINE Alu 0 347 131 352 259 28 61 chr10 2322598 2322810 -137993955 + MER46C DNA MER2_type 1 205 -133 693 133 18 0 chr10 2322937 2323050 -137993715 + AluSg/x SINE Alu 192 306 -6 449 182 10 0 chr10 2323198 2323297 -137993468 + (CATATA)n Simple_repeat Simple_repeat 6 105 0 344 276 23 0 chr10 2323297 2323384 -137993381 + L1MC4 LINE L1 6614 6702 -1340 207 182 0 0 chr10 2323385 2323418 -137993347 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 1137 128 0 0 chr10 2323418 2323598 -137993167 + (TA)n Simple_repeat Simple_repeat 1 180 0 31 99 0 0 chr10 2323739 2323840 -137992925 + AT_rich Low_complexity Low_complexity 1 101 0 843 290 153 17 chr10 2324198 2324970 -137991795 + L1ME3A LINE L1 5294 6170 0 763 308 47 18 chr10 2328924 2329376 -137987389 - L1ME3A LINE L1 -214 6374 5910 503 283 72 33 chr10 2329620 2329924 -137986841 - L1ME3A LINE L1 -913 5651 5336 1567 270 21 22 chr10 2330025 2330655 -137986110 + L1MC/D LINE L1 4024 4652 -1494 1403 164 9 4 chr10 2330663 2330894 -137985871 - AluSg/x SINE Alu -10 302 71 914 176 109 0 chr10 2330902 2331112 -137985653 - L1MA4A LINE L1 -134 6169 5937 1936 221 43 37 chr10 2331117 2332233 -137984532 + L1MC/D LINE L1 4645 5773 -571 916 277 52 13 chr10 2332233 2332692 -137984073 - L1ME3A LINE L1 -3058 3506 3030 382 241 55 41 chr10 2332705 2332850 -137983915 - L1ME3A LINE L1 -5882 163 17 335 255 168 0 chr10 2332984 2333145 -137983620 - L1MCa LINE L1 -3965 2461 2274 835 171 0 11 chr10 2333335 2333510 -137983255 + GA-rich Low_complexity Low_complexity 4 176 0 1380 231 66 52 chr10 2333819 2334421 -137982344 + L1MC4 LINE L1 7426 8036 -6 270 0 0 0 chr10 2334818 2334848 -137981917 + (T)n Simple_repeat Simple_repeat 1 30 0 318 193 114 57 chr10 2335695 2335783 -137980982 + MIR SINE MIR 20 112 -150 23 68 0 0 chr10 2335833 2335877 -137980888 + AT_rich Low_complexity Low_complexity 1 44 0 2738 23 0 0 chr10 2336801 2337109 -137979656 - AluYa5 SINE Alu -3 308 1 516 280 107 85 chr10 2337138 2337762 -137979003 + L1M4 LINE L1 4341 4978 -1168 1215 135 6 0 chr10 2338407 2338585 -137978180 - AluSq SINE Alu -1 312 134 399 284 245 29 chr10 2338600 2338673 -137978092 - L2 LINE L2 -1830 1484 1428 279 0 0 0 chr10 2338673 2338704 -137978061 + (TG)n Simple_repeat Simple_repeat 1 31 0 399 284 245 29 chr10 2338704 2338838 -137977927 - L2 LINE L2 -1886 1428 1232 1821 52 0 9 chr10 2339675 2339907 -137976858 + L1PA8 LINE L1 5930 6159 -13 293 306 25 64 chr10 2341383 2341540 -137975225 + MER5A DNA MER1_type 35 185 -4 1407 185 83 19 chr10 2341591 2341916 -137974849 + MER7A DNA MER2_type 1 344 -2 2264 68 0 17 chr10 2342386 2342679 -137974086 - AluY SINE Alu -23 288 1 257 267 27 0 chr10 2343376 2343451 -137973314 - HAL1 LINE L1 -616 1891 1815 1919 155 3 0 chr10 2343554 2343845 -137972920 + AluJb SINE Alu 1 292 -20 350 239 20 107 chr10 2344415 2344612 -137972153 - HAL1 LINE L1 -944 1563 1384 23 0 0 0 chr10 2345818 2345841 -137970924 + AT_rich Low_complexity Low_complexity 1 23 0 264 263 50 0 chr10 2346637 2346717 -137970048 + L1MC/D LINE L1 5805 5888 -1920 2027 204 24 5 chr10 2346721 2347137 -137969628 + MSTB LTR MaLR 1 424 -2 585 312 42 64 chr10 2347438 2347890 -137968875 + LTR16A1 LTR ERVL 16 457 0 759 180 0 16 chr10 2350519 2350702 -137966063 + (TG)n Simple_repeat Simple_repeat 1 180 0 1455 151 4 21 chr10 2351567 2351806 -137964959 - AluSg/x SINE Alu -7 305 71 668 244 51 25 chr10 2353465 2353662 -137963103 + L1MC3 LINE L1 40 241 -6155 * 1703 267 139 39 chr10 2353643 2353896 -137962869 + L1MC3 LINE L1 582 808 -5407 2216 109 3 3 chr10 2353896 2354207 -137962558 - AluSx SINE Alu -1 311 1 1703 267 139 39 chr10 2354207 2355916 -137960849 + L1MC3 LINE L1 808 2503 -3712 2759 243 67 23 chr10 2355917 2356869 -137959896 + L1MC3 LINE L1 4092 4604 -1611 1859 161 0 3 chr10 2356869 2357197 -137959568 + AluSx SINE Alu 1 327 0 2759 243 67 23 chr10 2357197 2358106 -137958659 + L1MC3 LINE L1 4604 5472 -743 2215 235 14 28 chr10 2358125 2358772 -137957993 + L1MC3 LINE L1 7210 7847 -7 244 357 9 27 chr10 2359121 2359167 -137957598 + MIR SINE MIR 1 46 -176 2367 110 0 0 chr10 2359167 2359476 -137957289 + AluSq SINE Alu 1 309 -4 244 357 9 27 chr10 2359476 2359592 -137957173 + MIR SINE MIR 46 154 -68 26 0 0 0 chr10 2360082 2360108 -137956657 + AT_rich Low_complexity Low_complexity 1 26 0 4463 119 14 14 chr10 2361042 2361732 -137955033 + LTR8 LTR ERV1 2 691 0 186 133 0 0 chr10 2361893 2361923 -137954842 + (TTTTG)n Simple_repeat Simple_repeat 5 34 0 2449 35 6 26 chr10 2362058 2362369 -137954396 - AluY SINE Alu -6 305 1 1011 190 26 4 chr10 2363589 2363821 -137952944 + MLT1B LTR MaLR 153 389 -1 274 105 0 0 chr10 2363910 2363948 -137952817 - Alu SINE Alu -263 38 1 261 0 0 0 chr10 2365122 2365151 -137951614 + (CA)n Simple_repeat Simple_repeat 1 29 0 1942 176 0 3 chr10 2365605 2365917 -137950848 - AluSx SINE Alu -1 311 1 1514 210 0 7 chr10 2366207 2366502 -137950263 - AluJo SINE Alu -19 293 1 1861 181 45 19 chr10 2366752 2367161 -137949604 - Tigger1 DNA MER2_type 0 2418 1999 1693 204 101 69 chr10 2367161 2367266 -137949499 - LTR9 LTR ERV1 0 612 512 2527 54 3 19 chr10 2367266 2367582 -137949183 + AluY SINE Alu 1 311 0 1693 204 101 69 chr10 2367582 2368069 -137948696 - LTR9 LTR ERV1 -100 512 1 * 9664 131 52 31 chr10 2368069 2368894 -137947871 - Tigger1 DNA MER2_type -419 1999 1193 2005 147 40 7 chr10 2368894 2369194 -137947571 - AluSx SINE Alu -2 310 1 9664 131 52 31 chr10 2369194 2370161 -137946604 - Tigger1 DNA MER2_type -1225 1193 170 2013 167 33 31 chr10 2370172 2370721 -137946044 + MLT2A2 LTR ERVL 1 554 0 757 133 44 0 chr10 2370721 2370855 -137945910 - Tigger1 DNA MER2_type -2255 163 24 27 29 0 0 chr10 2373111 2373145 -137943620 + AT_rich Low_complexity Low_complexity 1 34 0 205 204 61 34 chr10 2373277 2373424 -137943341 + (TATAA)n Simple_repeat Simple_repeat 2 152 0 500 283 33 28 chr10 2373747 2373927 -137942838 - MIR SINE MIR -71 191 11 373 305 53 27 chr10 2374117 2374304 -137942461 - L2 LINE L2 -27 3286 3095 962 282 173 38 chr10 2374512 2375302 -137941463 - L2 LINE L2 -616 2698 1802 1240 194 19 0 chr10 2376372 2376629 -137940136 + L1PA16 LINE L1 5891 6155 -11 1793 137 4 0 chr10 2376629 2376892 -137939873 + AluSq SINE Alu 2 265 -48 28 29 0 0 chr10 2376903 2376938 -137939827 + AT_rich Low_complexity Low_complexity 1 35 0 181 0 0 0 chr10 2377346 2377366 -137939399 + (TTTTA)n Simple_repeat Simple_repeat 5 65 0 2005 135 0 0 chr10 2377366 2377647 -137939118 - AluSx SINE Alu -1 301 2 497 337 28 17 chr10 2378249 2378537 -137938228 - ERVL LTR ERVL -3253 2511 2221 255 248 157 81 chr10 2378720 2378930 -137937835 - ERVL LTR ERVL -3083 1913 1688 440 352 8 30 chr10 2378994 2379230 -137937535 - ERVL LTR ERVL -3449 1547 1317 24 0 0 0 chr10 2380181 2380205 -137936560 + AT_rich Low_complexity Low_complexity 1 24 0 816 251 78 31 chr10 2380936 2381368 -137935397 - MLT1E LTR MaLR 0 593 46 2146 120 0 10 chr10 2381787 2382070 -137934695 + AluSx SINE Alu 1 282 -30 234 0 0 0 chr10 2382070 2382096 -137934669 + (TA)n Simple_repeat Simple_repeat 2 27 0 2146 120 0 10 chr10 2382096 2382112 -137934653 + AluSx SINE Alu 282 297 -15 213 175 0 0 chr10 2382243 2382283 -137934482 + (TG)n Simple_repeat Simple_repeat 2 41 0 342 67 0 0 chr10 2383519 2383564 -137933201 + (TG)n Simple_repeat Simple_repeat 2 46 0 257 175 10 52 chr10 2383954 2384051 -137932714 + (TATATG)n Simple_repeat Simple_repeat 2 94 0 277 239 8 90 chr10 2384432 2384503 -137932262 + MLT2C1 LTR ERVL 275 331 -66 2228 92 3 35 chr10 2384503 2384819 -137931946 - AluSx SINE Alu -6 306 1 277 239 8 90 chr10 2384819 2384881 -137931884 + MLT2C1 LTR ERVL 331 397 0 2251 123 0 0 chr10 2385469 2385779 -137930986 + AluSg SINE Alu 1 310 0 195 100 0 0 chr10 2385812 2385842 -137930923 + (CAAAA)n Simple_repeat Simple_repeat 3 32 0 218 346 88 11 chr10 2386471 2386653 -137930112 + L2 LINE L2 2196 2391 -923 218 337 45 0 chr10 2386972 2387061 -137929704 + MIR3 SINE MIR 96 188 -20 21 0 0 0 chr10 2387658 2387679 -137929086 + AT_rich Low_complexity Low_complexity 1 21 0 203 167 0 28 chr10 2387725 2387797 -137928968 + (TTATA)n Simple_repeat Simple_repeat 5 74 0 288 238 46 13 chr10 2387800 2387951 -137928814 + (TA)n Simple_repeat Simple_repeat 2 157 0 2063 99 7 7 chr10 2388080 2388362 -137928403 + AluSx SINE Alu 3 284 -28 1046 201 36 12 chr10 2388810 2389059 -137927706 - L1MB1 LINE L1 0 6168 5914 26 0 0 0 chr10 2392027 2392053 -137924712 + AT_rich Low_complexity Low_complexity 1 26 0 1502 161 8 0 chr10 2393111 2393347 -137923418 + AluJo SINE Alu 35 272 -40 207 0 0 0 chr10 2393363 2393386 -137923379 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1642 115 0 0 chr10 2393548 2393766 -137922999 - AluSx SINE Alu -94 218 1 803 216 72 53 chr10 2393767 2394160 -137922605 + L1MDb LINE L1 1320 1720 -4686 851 167 13 8 chr10 2394289 2394529 -137922236 + CT-rich Low_complexity Low_complexity 1 241 0 2184 290 23 14 chr10 2395085 2396198 -137920567 - L1ME1 LINE L1 -5 6161 5039 1105 255 22 3 chr10 2396201 2396519 -137920246 - MER33 DNA MER1_type 0 324 1 1574 242 62 87 chr10 2396528 2397685 -137919080 - L1ME1 LINE L1 -1112 5034 3917 231 274 12 24 chr10 2397986 2398070 -137918695 + GA-rich Low_complexity Low_complexity 1 83 0 383 324 42 9 chr10 2398314 2398530 -137918235 - MIR SINE MIR -32 230 8 350 298 9 18 chr10 2399223 2399337 -137917428 + L1ME4a LINE L1 5944 6056 -65 342 0 0 0 chr10 2401197 2401235 -137915530 + (CA)n Simple_repeat Simple_repeat 2 39 0 453 161 0 0 chr10 2401691 2401778 -137914987 + (CA)n Simple_repeat Simple_repeat 2 88 0 374 38 0 19 chr10 2403699 2403752 -137913013 + (CA)n Simple_repeat Simple_repeat 1 52 0 21 36 0 0 chr10 2404021 2404049 -137912716 + AT_rich Low_complexity Low_complexity 1 28 0 488 294 124 19 chr10 2405288 2405829 -137910936 - L1ME1 LINE L1 -2260 3886 3289 489 329 39 19 chr10 2405859 2406169 -137910596 - L1ME1 LINE L1 -3461 2685 2370 2258 249 33 12 chr10 2406355 2407047 -137909718 - L1MC3 LINE L1 0 7785 7079 1193 241 68 29 chr10 2407053 2407468 -137909297 - L1MC3 LINE L1 -937 6848 6418 1536 166 3 66 chr10 2407481 2407770 -137908995 + AluJo SINE Alu 11 281 -31 25 75 0 0 chr10 2407907 2407960 -137908805 + AT_rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr10 2408016 2408037 -137908728 + AT_rich Low_complexity Low_complexity 1 21 0 1016 222 66 26 chr10 2408730 2409088 -137907677 - MLT2D LTR ERVL -94 426 1 542 103 0 0 chr10 2409138 2409216 -137907549 + MADE1 DNA Mariner 1 78 -2 2102 132 0 0 chr10 2410354 2410649 -137906116 - AluSq SINE Alu -18 295 1 528 283 0 0 chr10 2411221 2411366 -137905399 - MIR SINE MIR -36 226 82 1877 144 38 123 chr10 2411520 2411993 -137904772 - Tigger2 DNA MER2_type 0 2718 2 327 313 23 16 chr10 2412424 2412552 -137904213 - MIR SINE MIR -133 129 1 1349 247 42 37 chr10 2413689 2414256 -137902509 + L1MDa LINE L1 1849 2418 -4122 1433 137 0 0 chr10 2414404 2414609 -137902156 - AluSx SINE Alu -107 205 1 1531 166 13 42 chr10 2415189 2415304 -137901461 + AluJo SINE Alu 2 119 -193 468 0 0 0 chr10 2415304 2415356 -137901409 + (CA)n Simple_repeat Simple_repeat 1 52 0 1531 166 13 42 chr10 2415356 2415547 -137901218 + AluJo SINE Alu 119 299 -13 23 0 0 0 chr10 2415547 2415570 -137901195 + AT_rich Low_complexity Low_complexity 1 23 0 183 139 0 0 chr10 2416198 2416234 -137900531 + (T)n Simple_repeat Simple_repeat 1 36 0 337 289 37 44 chr10 2416413 2416686 -137900079 + LTR37B LTR ERV1 198 468 0 181 231 39 39 chr10 2417392 2417444 -137899321 - MIR3 SINE MIR -7 201 150 639 213 25 0 chr10 2417459 2417619 -137899146 + L1MCa LINE L1 1769 1932 -4494 2369 97 3 0 chr10 2417648 2417958 -137898807 + AluSq SINE Alu 1 311 -2 287 278 140 7 chr10 2418028 2418457 -137898308 + MLT1E1 LTR MaLR 25 513 -111 528 160 14 83 chr10 2418745 2418889 -137897876 - L1M LINE L1 -775 5393 5260 242 331 60 60 chr10 2418934 2419085 -137897680 - L2 LINE L2 -39 3233 3083 228 399 114 0 chr10 2419293 2419486 -137897279 - L2 LINE L2 -549 2765 2551 6119 257 45 45 chr10 2420082 2423510 -137893255 - L1M4 LINE L1 -973 5671 2243 301 189 42 63 chr10 2423621 2423716 -137893049 - L1M4 LINE L1 -5568 974 882 517 314 56 37 chr10 2423797 2424258 -137892507 - L1M4 LINE L1 -5673 869 400 28 0 0 0 chr10 2425433 2425461 -137891304 + AT_rich Low_complexity Low_complexity 1 28 0 7563 224 78 22 chr10 2425664 2426480 -137890285 - L1MC3 LINE L1 -16 7769 7001 234 91 0 0 chr10 2426480 2426513 -137890252 + (TG)n Simple_repeat Simple_repeat 2 34 0 7563 224 78 22 chr10 2426513 2428242 -137888523 - L1MC3 LINE L1 -784 7001 5083 337 105 0 18 chr10 2428383 2428440 -137888325 + MADE1 DNA Mariner 1 56 -24 227 349 40 0 chr10 2428821 2428947 -137887818 + LTR16A LTR ERVL 298 428 -22 2195 116 0 3 chr10 2428947 2429258 -137887507 - AluSx SINE Alu -2 310 1 223 353 72 43 chr10 2431500 2431707 -137885058 - MIR SINE MIR -49 213 1 208 323 46 39 chr10 2432540 2432670 -137884095 - L2 LINE L2 -10 3303 3173 387 267 11 39 chr10 2433929 2434109 -137882656 + L1MA9 LINE L1 6099 6273 -39 23 0 0 0 chr10 2434109 2434132 -137882633 + AT_rich Low_complexity Low_complexity 1 23 0 348 24 0 0 chr10 2435059 2435100 -137881665 + (TG)n Simple_repeat Simple_repeat 1 41 0 277 330 58 111 chr10 2435213 2435370 -137881395 + L2 LINE L2 1764 1928 -1386 2443 116 28 0 chr10 2435370 2435724 -137881041 - THE1B LTR MaLR 0 364 1 277 330 58 111 chr10 2435724 2436100 -137880665 + L2 LINE L2 1928 2269 -1045 189 0 0 0 chr10 2437414 2437435 -137879330 + (TTCTG)n Simple_repeat Simple_repeat 2 22 0 683 89 0 89 chr10 2439059 2439182 -137877583 - MER57B LTR ERV1 0 434 323 1372 237 73 35 chr10 2439293 2439370 -137877395 - L1MD2 LINE L1 -13 6415 6342 2171 119 10 3 chr10 2439370 2439680 -137877085 - AluSq SINE Alu -1 312 1 1372 237 73 35 chr10 2439680 2440989 -137875776 - L1MD2 LINE L1 -86 6342 4909 1415 256 77 33 chr10 2441140 2441236 -137875529 - L1ME1 LINE L1 -18 6148 6058 1492 158 40 66 chr10 2441236 2441540 -137875225 + AluJo SINE Alu 1 296 -16 1415 256 77 33 chr10 2441540 2442076 -137874689 - L1ME1 LINE L1 -108 6058 5488 229 247 155 10 chr10 2442082 2442179 -137874586 - L1MD2 LINE L1 -6251 145 35 588 319 114 23 chr10 2442387 2442957 -137873808 + L2 LINE L2 2454 3076 -237 186 136 34 17 chr10 2443379 2443438 -137873327 + (TA)n Simple_repeat Simple_repeat 1 60 0 236 217 36 42 chr10 2443440 2443606 -137873159 + (TTATA)n Simple_repeat Simple_repeat 4 168 0 25 31 0 0 chr10 2443606 2443638 -137873127 + AT_rich Low_complexity Low_complexity 1 32 0 947 245 62 28 chr10 2444317 2444451 -137872314 + MLT1C LTR MaLR 53 181 -286 2232 117 7 0 chr10 2444451 2444758 -137872007 + AluSp SINE Alu 1 309 -4 947 245 62 28 chr10 2444758 2445023 -137871742 + MLT1C LTR MaLR 181 466 -1 22 0 0 0 chr10 2445610 2445632 -137871133 + AT_rich Low_complexity Low_complexity 1 22 0 210 37 0 0 chr10 2446382 2446409 -137870356 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1577 107 0 5 chr10 2446412 2446627 -137870138 - AluSg/x SINE Alu -22 290 77 748 255 59 17 chr10 2446733 2447023 -137869742 + MER33 DNA MER1_type 1 302 -22 224 379 137 5 chr10 2447196 2447407 -137869358 - MIR SINE MIR -19 243 5 2167 103 40 7 chr10 2450571 2450871 -137865894 + AluSx SINE Alu 1 310 -2 327 209 0 0 chr10 2451480 2451590 -137865175 + (CA)n Simple_repeat Simple_repeat 2 111 0 515 216 6 0 chr10 2451619 2451786 -137864979 + (CA)n Simple_repeat Simple_repeat 2 169 0 25 0 0 0 chr10 2452195 2452220 -137864545 + AT_rich Low_complexity Low_complexity 1 25 0 369 184 13 13 chr10 2452237 2452313 -137864452 - AluJ/FRAM SINE Alu -7 295 220 8012 26 0 0 chr10 2452334 2454052 -137862713 - L1PA4 LINE L1 0 6155 4439 342 0 0 0 chr10 2454799 2454837 -137861928 + (TG)n Simple_repeat Simple_repeat 2 39 0 521 282 130 6 chr10 2456624 2457155 -137859610 - MLT1E3 LTR MaLR 0 624 25 2309 96 3 0 chr10 2457225 2457527 -137859238 - AluSq SINE Alu -10 303 1 541 177 73 8 chr10 2457666 2457790 -137858975 + L1MC3 LINE L1 7342 7473 -312 218 167 37 0 chr10 2457800 2457854 -137858911 + (TTATA)n Simple_repeat Simple_repeat 4 59 0 290 161 18 0 chr10 2457861 2457917 -137858848 - L1MC3 LINE L1 -312 7473 7417 381 300 13 21 chr10 2458655 2459013 -137857752 + T-rich Low_complexity Low_complexity 1 482 0 2286 67 3 0 chr10 2460877 2461177 -137855588 + AluY SINE Alu 4 304 -7 239 143 0 18 chr10 2462578 2462634 -137854131 + (TTTTC)n Simple_repeat Simple_repeat 1 55 0 550 0 29 0 chr10 2463309 2463379 -137853386 + (TAGA)n Simple_repeat Simple_repeat 4 75 0 2259 99 0 10 chr10 2463534 2463838 -137852927 - AluSp SINE Alu -12 301 1 346 306 66 53 chr10 2464987 2465307 -137851458 + L1M4 LINE L1 4484 4807 -1339 1137 260 19 0 chr10 2465418 2465733 -137851032 - L1MCb LINE L1 -5078 967 647 307 202 62 70 chr10 2465756 2465885 -137850880 + L1MCb LINE L1 934 1061 -4984 * 1211 153 7 65 chr10 2465877 2466152 -137850613 + L1MC1 LINE L1 5623 5881 -452 31 0 0 0 chr10 2466152 2466183 -137850582 + AT_rich Low_complexity Low_complexity 1 31 0 372 157 47 6 chr10 2466183 2466355 -137850410 + (TA)n Simple_repeat Simple_repeat 2 180 0 274 240 54 0 chr10 2468443 2468572 -137848193 + (CTAG)n Simple_repeat Simple_repeat 3 138 0 2182 55 15 0 chr10 2470051 2470322 -137846443 - AluY SINE Alu -7 304 30 240 301 113 23 chr10 2470381 2470514 -137846251 + MIR SINE MIR 115 259 -3 22 0 0 0 chr10 2472957 2472979 -137843786 + AT_rich Low_complexity Low_complexity 1 22 0 213 39 0 0 chr10 2474442 2474468 -137842297 + (CA)n Simple_repeat Simple_repeat 1 26 0 235 330 9 57 chr10 2475146 2475252 -137841513 - MIR SINE MIR -68 140 40 240 200 0 0 chr10 2475848 2475908 -137840857 + (TA)n Simple_repeat Simple_repeat 1 60 0 566 344 114 14 chr10 2476266 2476624 -137840141 + L2 LINE L2 2920 3313 0 268 309 36 12 chr10 2476715 2476799 -137839966 - L2 LINE L2 -19 3294 3209 813 205 127 72 chr10 2476898 2477244 -137839521 + MLT1A1 LTR MaLR 1 365 0 1585 215 0 0 chr10 2477550 2477834 -137838931 + AluJb SINE Alu 10 293 -19 1279 209 38 62 chr10 2478499 2478872 -137837893 + MLT1A1 LTR MaLR 1 364 -1 25 0 0 0 chr10 2479337 2479362 -137837403 + AT_rich Low_complexity Low_complexity 1 25 0 287 307 162 0 chr10 2479903 2480082 -137836683 - L1ME LINE L1 -300 5864 5657 4953 248 57 57 chr10 2480102 2480482 -137836283 + L1M4 LINE L1 2 380 -6445 2353 129 11 5 chr10 2480482 2480855 -137835910 + THE1C LTR MaLR 1 375 0 4953 248 57 57 chr10 2480855 2481861 -137834904 + L1M4 LINE L1 380 1384 -5441 2299 114 0 0 chr10 2481861 2482167 -137834598 + AluSq SINE Alu 1 306 -7 4953 248 57 57 chr10 2482167 2483270 -137833495 + L1M4 LINE L1 1384 2656 -4169 477 226 57 56 chr10 2483365 2483558 -137833207 - L1ME LINE L1 -685 5479 5288 180 0 0 0 chr10 2483558 2483578 -137833187 + (TA)n Simple_repeat Simple_repeat 2 21 0 2283 80 0 0 chr10 2483578 2483867 -137832898 - AluY SINE Alu -22 289 1 477 226 57 56 chr10 2483867 2483957 -137832808 - L1ME LINE L1 -875 5289 5192 234 0 0 0 chr10 2484006 2484032 -137832733 + (CA)n Simple_repeat Simple_repeat 1 26 0 322 310 133 22 chr10 2484059 2484285 -137832480 + L1ME LINE L1 377 627 -5443 291 313 0 0 chr10 2484458 2484554 -137832211 + HsTC2 DNA Tc2 1802 1897 -1 206 323 16 0 chr10 2486482 2486544 -137830221 + C-rich Low_complexity Low_complexity 5 67 0 339 354 50 0 chr10 2486639 2486800 -137829965 - MIR SINE MIR -74 188 20 334 171 81 25 chr10 2486828 2486907 -137829858 - FRAM/FAM SINE Alu -90 85 16 2098 131 3 0 chr10 2487832 2488130 -137828635 + AluSx SINE Alu 1 299 -13 272 282 13 0 chr10 2488483 2488561 -137828204 + MER116 DNA Mariner 1 79 -1 31 26 0 0 chr10 2488984 2489022 -137827743 + AT_rich Low_complexity Low_complexity 1 38 0 2021 127 3 29 chr10 2489434 2489748 -137827017 + AluSx SINE Alu 1 306 -6 257 246 0 0 chr10 2489787 2489848 -137826917 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 216 381 41 0 chr10 2490733 2490830 -137825935 + L2 LINE L2 3158 3258 -14 2363 86 3 13 chr10 2490917 2491053 -137825712 + AluSx SINE Alu 1 137 -196 2266 85 7 16 chr10 2491053 2491360 -137825405 + AluY SINE Alu 1 304 -7 2363 86 3 13 chr10 2491360 2491559 -137825206 + AluSx SINE Alu 137 333 0 2172 96 7 10 chr10 2492218 2492510 -137824255 + AluSg SINE Alu 1 291 -19 2475 59 7 0 chr10 2493134 2493441 -137823324 - AluY SINE Alu -2 309 1 423 312 76 62 chr10 2494813 2495266 -137821499 - L1MCc LINE L1 -4574 2548 2103 279 93 0 0 chr10 2495266 2495309 -137821456 + (TG)n Simple_repeat Simple_repeat 2 44 0 423 312 76 62 chr10 2495309 2496555 -137820210 - L1MCc LINE L1 -5019 2103 655 768 303 83 5 chr10 2496675 2497098 -137819667 - L1MCc LINE L1 -5949 474 19 1959 143 0 0 chr10 2497315 2497595 -137819170 + AluSx SINE Alu 1 280 -32 390 57 0 0 chr10 2497598 2497651 -137819114 + (CA)n Simple_repeat Simple_repeat 2 54 0 2514 55 0 0 chr10 2498098 2498408 -137818357 - AluY SINE Alu -1 310 1 233 140 18 0 chr10 2498545 2498602 -137818163 + GA-rich Low_complexity Low_complexity 2 59 0 1902 144 4 0 chr10 2499546 2499862 -137816903 + AluSx SINE Alu 6 322 0 21 0 0 0 chr10 2500010 2500031 -137816734 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr10 2501628 2501659 -137815106 + AT_rich Low_complexity Low_complexity 1 31 0 702 202 0 4 chr10 2502699 2502940 -137813825 + GA-rich Low_complexity Low_complexity 1 239 0 246 252 103 47 chr10 2503068 2503175 -137813590 - L2 LINE L2 0 3272 3160 1158 102 36 0 chr10 2503268 2503435 -137813330 + L1PA13 LINE L1 5972 6144 -19 556 321 32 0 chr10 2503804 2503991 -137812774 - MIR SINE MIR -4 258 66 337 255 0 57 chr10 2505056 2505162 -137811603 + L2 LINE L2 2458 2557 -757 1515 97 0 29 chr10 2505173 2505379 -137811386 - AluSq SINE Alu -113 200 1 239 280 32 64 chr10 2505415 2505540 -137811225 + L2 LINE L2 3193 3313 0 24 67 0 0 chr10 2507018 2507063 -137809702 + AT_rich Low_complexity Low_complexity 1 45 0 386 283 53 25 chr10 2508355 2508670 -137808095 - L1MEc LINE L1 -5918 478 91 * 2036 217 46 19 chr10 2508664 2509300 -137807465 - L1M4 LINE L1 -1316 4830 4178 2127 138 0 0 chr10 2510539 2510835 -137805930 + AluSx SINE Alu 3 298 -14 1407 233 43 62 chr10 2511646 2511963 -137804802 + MLT1D LTR MaLR 1 305 -200 370 145 53 26 chr10 2511963 2512039 -137804726 + MADE1 DNA Mariner 3 80 0 1407 233 43 62 chr10 2512039 2512234 -137804531 + MLT1D LTR MaLR 305 502 -3 1017 205 10 0 chr10 2512331 2512526 -137804239 + L1MC3 LINE L1 6666 6862 -923 1322 248 103 15 chr10 2512562 2513017 -137803748 + L1MC3 LINE L1 7282 7776 -9 29 28 0 0 chr10 2513041 2513077 -137803688 + AT_rich Low_complexity Low_complexity 1 36 0 26 0 0 0 chr10 2513250 2513276 -137803489 + AT_rich Low_complexity Low_complexity 1 26 0 437 306 36 16 chr10 2513326 2513519 -137803246 + L1MC5 LINE L1 6995 7191 -770 1924 131 17 17 chr10 2514162 2514459 -137802306 + AluSx SINE Alu 1 297 -15 394 281 82 0 chr10 2515847 2515982 -137800783 - MLT1H LTR MaLR -26 523 378 394 182 0 39 chr10 2516091 2516168 -137800597 - AluS SINE Alu -228 74 1 213 281 11 34 chr10 2516604 2516693 -137800072 - MIR SINE MIR -23 239 153 234 184 0 0 chr10 2517785 2517834 -137798931 + L1ME4a LINE L1 6069 6117 -4 369 298 99 33 chr10 2518059 2518331 -137798434 + MLT1H LTR MaLR 62 351 -198 920 60 0 0 chr10 2521485 2521602 -137795163 + L1PA4 LINE L1 6031 6147 -8 2029 69 0 138 chr10 2522002 2522351 -137794414 + AluY SINE Alu 1 301 -10 289 313 109 16 chr10 2522944 2523072 -137793693 + MIR SINE MIR 12 151 -111 32 43 0 0 chr10 2523979 2524025 -137792740 + AT_rich Low_complexity Low_complexity 1 46 0 329 311 0 0 chr10 2524028 2524118 -137792647 - L1MC4 LINE L1 -1339 6703 6614 316 322 0 0 chr10 2524050 2524140 -137792625 + L1MC4 LINE L1 6614 6703 -1339 * 2319 79 14 0 chr10 2524151 2524441 -137792324 - AluY SINE Alu -17 294 1 22 35 0 0 chr10 2524833 2524862 -137791903 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr10 2524997 2525026 -137791739 + AT_rich Low_complexity Low_complexity 1 29 0 454 259 78 18 chr10 2525359 2525525 -137791240 - MLT1E2 LTR MaLR -11 615 440 486 245 15 67 chr10 2525760 2525978 -137790787 + L1MCa LINE L1 1508 1906 -4701 1594 257 32 20 chr10 2525978 2526624 -137790141 + L1MCa LINE L1 2899 3552 -2874 488 264 110 0 chr10 2527004 2527186 -137789579 + MER5C DNA MER1_type 1 202 -122 205 195 0 0 chr10 2528639 2528680 -137788085 + (TA)n Simple_repeat Simple_repeat 1 41 0 2292 206 41 4 chr10 2529556 2530022 -137786743 + MER66B LTR ERV1 1 483 -3 233 308 19 19 chr10 2530025 2530129 -137786636 + L1MEd LINE L1 324 427 -5692 457 177 37 7 chr10 2530319 2530591 -137786174 + (TA)n Simple_repeat Simple_repeat 1 280 0 337 184 48 0 chr10 2530606 2530774 -137785991 + (TA)n Simple_repeat Simple_repeat 2 177 0 495 155 45 0 chr10 2530798 2531133 -137785632 + (TA)n Simple_repeat Simple_repeat 1 350 0 1928 190 68 26 chr10 2531133 2531591 -137785174 + L1MC2 LINE L1 5859 6335 -9 225 352 38 48 chr10 2531889 2532099 -137784666 + L3 LINE CR1 816 1023 -554 208 344 0 0 chr10 2532180 2532241 -137784524 - MIR SINE MIR -6 256 196 189 308 68 60 chr10 2532694 2532827 -137783938 + MIR SINE MIR 20 153 -109 272 222 0 48 chr10 2533184 2533247 -137783518 + MER4-int LTR ERV1 1112 1171 -5427 2299 110 7 0 chr10 2533996 2534305 -137782460 - AluSx SINE Alu -1 311 1 2030 115 7 7 chr10 2535101 2535387 -137781378 - AluSx SINE Alu -26 286 1 24 32 0 0 chr10 2536335 2536366 -137780399 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr10 2536390 2536414 -137780351 + AT_rich Low_complexity Low_complexity 1 24 0 203 288 25 94 chr10 2537568 2537728 -137779037 + L2 LINE L2 2906 3054 -218 2629 110 22 0 chr10 2538152 2538508 -137778257 + THE1B LTR MaLR 1 364 0 213 39 0 0 chr10 2540134 2540160 -137776605 + (A)n Simple_repeat Simple_repeat 1 26 0 322 225 0 0 chr10 2540392 2540463 -137776302 - L1ME4a LINE L1 0 6121 6051 2474 48 7 0 chr10 2541024 2541316 -137775449 - AluY SINE Alu -8 303 10 263 338 14 27 chr10 2541798 2541946 -137774819 + L1MCc LINE L1 763 908 -5515 2009 111 18 56 chr10 2542194 2542429 -137774336 + THE1B LTR MaLR 3 223 -141 2170 121 0 3 chr10 2542429 2542727 -137774038 + AluSx SINE Alu 1 297 -15 2009 111 18 56 chr10 2542727 2542832 -137773933 + THE1B LTR MaLR 223 330 -34 722 305 44 29 chr10 2542915 2543327 -137773438 + L1MCc LINE L1 1197 1608 -4887 317 351 15 8 chr10 2543344 2543478 -137773287 + L1M4 LINE L1 4829 4963 -1183 647 283 46 8 chr10 2543484 2543721 -137773044 + L1M4 LINE L1 4004 4249 -1897 823 280 42 21 chr10 2543729 2544111 -137772654 + L1M4 LINE L1 4292 4681 -1465 261 281 66 12 chr10 2546238 2546405 -137770360 + L1MCc LINE L1 523 698 -6243 229 155 21 62 chr10 2546994 2547091 -137769674 + L1MCc LINE L1 1660 1752 -5189 * 815 255 31 80 chr10 2547059 2547605 -137769160 + L1MCc LINE L1 1683 2213 -4728 2171 123 0 7 chr10 2548071 2548402 -137768363 - AluSx SINE Alu 0 330 2 1335 72 0 0 chr10 2548887 2549067 -137767698 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 693 79 26 9 chr10 2549067 2549181 -137767584 + (TTTC)n Simple_repeat Simple_repeat 4 119 0 214 29 57 0 chr10 2549837 2549872 -137766893 + (TA)n Simple_repeat Simple_repeat 1 37 0 281 26 26 0 chr10 2551294 2551332 -137765433 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 243 0 0 0 chr10 2552011 2552038 -137764727 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2834 118 3 0 chr10 2552214 2552588 -137764177 - THE1C LTR MaLR 0 375 1 2539 136 24 2 chr10 2552950 2553361 -137763404 + MSTB1 LTR MaLR 1 420 -12 21 82 0 0 chr10 2553939 2553988 -137762777 + AT_rich Low_complexity Low_complexity 1 49 0 1636 103 45 5 chr10 2554288 2554512 -137762253 + AluSx SINE Alu 60 292 -20 2529 70 0 3 chr10 2555583 2555895 -137760870 - AluY SINE Alu 0 311 1 245 203 63 101 chr10 2556095 2556253 -137760512 + HAL1b LINE L1 654 805 -543 23 54 0 0 chr10 2556705 2556742 -137760023 + AT_rich Low_complexity Low_complexity 1 37 0 2659 266 126 7 chr10 2558301 2559172 -137757593 + L1M4b LINE L1 1 975 -5884 2529 278 57 45 chr10 2559651 2561054 -137755711 + L1M4b LINE L1 1120 2686 -4452 995 109 0 0 chr10 2561211 2561339 -137755426 - AluSq/x SINE Alu -184 128 1 660 287 0 32 chr10 2561402 2561618 -137755147 - MER3 DNA MER1_type 0 209 1 1921 202 17 6 chr10 2561814 2562175 -137754590 - MLT1A1 LTR MaLR 0 365 1 1467 265 23 25 chr10 2562375 2562846 -137753919 - MER110 LTR ERV1 -5 486 17 225 227 0 0 chr10 2562857 2562901 -137753864 - MER110 LTR ERV1 -446 45 2 207 186 0 0 chr10 2563663 2563706 -137753059 + (CATATA)n Simple_repeat Simple_repeat 6 48 0 23 0 0 0 chr10 2563958 2563981 -137752784 + AT_rich Low_complexity Low_complexity 1 23 0 1541 264 57 11 chr10 2564499 2564939 -137751826 - LTR40b LTR ERVL 0 462 3 532 204 168 77 chr10 2565252 2565552 -137751213 + MLT1C LTR MaLR 51 443 -24 367 68 34 0 chr10 2565560 2565619 -137751146 + (TG)n Simple_repeat Simple_repeat 1 61 0 3845 188 33 11 chr10 2566416 2567113 -137749652 - MER44D DNA MER2_type -7 598 15 240 298 26 18 chr10 2567259 2567373 -137749392 + L1MC/D LINE L1 5547 5661 -2147 2112 103 7 33 chr10 2567385 2567687 -137749078 + AluSx SINE Alu 1 294 -18 231 36 0 0 chr10 2567687 2567715 -137749050 + (GGAA)n Simple_repeat Simple_repeat 3 30 0 290 194 0 10 chr10 2568384 2568482 -137748283 + (CA)n Simple_repeat Simple_repeat 1 97 0 21 89 0 0 chr10 2568579 2568635 -137748130 + AT_rich Low_complexity Low_complexity 1 56 0 243 286 24 0 chr10 2568636 2568720 -137748045 + L1MC/D LINE L1 5771 5856 -1952 261 0 0 0 chr10 2568950 2568979 -137747786 + (TG)n Simple_repeat Simple_repeat 2 30 0 377 279 68 26 chr10 2569696 2569886 -137746879 - LTR16B LTR ERVL 0 464 267 201 237 13 26 chr10 2623025 2623101 -137693664 + A-rich Low_complexity Low_complexity 2 76 0 41 0 0 0 chr10 2623789 2623830 -137692935 + AT_rich Low_complexity Low_complexity 1 41 0 261 0 0 0 chr10 2624627 2624656 -137692109 + (CA)n Simple_repeat Simple_repeat 2 30 0 26 30 0 0 chr10 2624722 2624755 -137692010 + AT_rich Low_complexity Low_complexity 1 33 0 867 182 54 54 chr10 2625113 2625316 -137691449 + THE1B LTR MaLR 107 309 -55 1057 284 101 22 chr10 2625484 2625998 -137690767 - L2 LINE L2 -1 3312 2748 423 303 229 14 chr10 2626034 2626387 -137690378 - L2 LINE L2 -695 2619 2191 3346 113 26 27 chr10 2626405 2626980 -137689785 + MER51A LTR ERV1 1 634 0 323 285 145 73 chr10 2626980 2627284 -137689481 - L2 LINE L2 -1126 2188 1853 2257 115 0 3 chr10 2627284 2627598 -137689167 + AluSq SINE Alu 1 313 0 323 285 145 73 chr10 2627598 2627651 -137689114 - L2 LINE L2 -1461 1853 1805 24 0 0 0 chr10 2627673 2627697 -137689068 + AT_rich Low_complexity Low_complexity 1 24 0 1149 160 27 18 chr10 2627697 2627916 -137688849 - L1MB2 LINE L1 -3 6168 5948 384 262 0 12 chr10 2627955 2628039 -137688726 - MER5A DNA MER1_type -106 83 1 490 337 12 0 chr10 2628051 2628223 -137688542 - MER5B DNA MER1_type -4 174 1 * 935 309 182 19 chr10 2628223 2628863 -137687902 - L2 LINE L2 -1800 1514 770 502 308 140 22 chr10 2628863 2629184 -137687581 - L2 LINE L2 -2946 368 10 2177 134 3 0 chr10 2629630 2629937 -137686828 + AluSx SINE Alu 1 308 -4 2237 122 0 3 chr10 2632434 2632745 -137684020 + AluSg SINE Alu 1 310 0 9769 163 9 6 chr10 2633266 2636013 -137680752 + L1PB1 LINE L1 3394 6151 0 917 190 0 0 chr10 2636158 2636316 -137680449 - AluSg/x SINE Alu -20 290 133 249 313 133 16 chr10 2636559 2636687 -137680078 + MER5B DNA MER1_type 2 144 -34 185 309 18 0 chr10 2637741 2637796 -137678969 - MIR3 SINE MIR -7 201 146 3196 196 60 4 chr10 2637807 2638322 -137678443 - L1MA4A LINE L1 0 6303 5739 279 79 0 0 chr10 2638322 2638360 -137678405 + (TTCA)n Simple_repeat Simple_repeat 4 41 0 3196 196 60 4 chr10 2638360 2638527 -137678238 - L1MA4A LINE L1 -564 5739 5583 1533 111 53 0 chr10 2638693 2638901 -137677864 - AluSg SINE Alu -52 258 40 389 196 0 10 chr10 2640372 2640469 -137676296 + (TG)n Simple_repeat Simple_repeat 2 97 0 1507 154 3 65 chr10 2641223 2641515 -137675250 + AluJo SINE Alu 9 282 -30 481 317 102 15 chr10 2641564 2641968 -137674797 - L2 LINE L2 -1717 1597 1159 366 223 108 47 chr10 2642658 2642830 -137673935 - MLT1J1 LTR MaLR -8 417 246 203 231 31 0 chr10 2645979 2646044 -137670721 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 297 287 165 9 chr10 2646611 2646726 -137670039 + MIR SINE MIR 27 159 -103 218 309 25 12 chr10 2646741 2646822 -137669943 + MIR SINE MIR 116 197 -65 2406 92 0 0 chr10 2647076 2647379 -137669386 + AluSq SINE Alu 1 303 -10 372 357 28 7 chr10 2647531 2647674 -137669091 + MER91A DNA MER1_type 3 148 -48 212 184 0 0 chr10 2647887 2647925 -137668840 + A-rich Low_complexity Low_complexity 1 38 0 307 290 43 91 chr10 2648185 2648729 -137668036 + L1ME LINE L1 5327 5855 -266 201 231 39 0 chr10 2648729 2648781 -137667984 + (TGGA)n Simple_repeat Simple_repeat 3 56 0 211 118 29 0 chr10 2650115 2650149 -137666616 + L2 LINE L2 3233 3267 -5 182 61 0 30 chr10 2650225 2650258 -137666507 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 1717 142 0 0 chr10 2650261 2650501 -137666264 - AluJb SINE Alu -27 285 46 28 48 0 0 chr10 2650551 2650593 -137666172 + AT_rich Low_complexity Low_complexity 1 42 0 24 32 0 0 chr10 2651067 2651098 -137665667 + AT_rich Low_complexity Low_complexity 1 31 0 3408 170 69 11 chr10 2652189 2652416 -137664349 - L1PB4 LINE L1 -3 6153 5941 2047 147 69 30 chr10 2652416 2652777 -137663988 + THE1C LTR MaLR 1 375 0 3408 170 69 11 chr10 2652777 2653190 -137663575 - L1PB4 LINE L1 -215 5941 5476 1096 194 51 0 chr10 2653190 2653386 -137663379 - AluJo SINE Alu -20 292 87 47 33 0 0 chr10 2654335 2654396 -137662369 + AT_rich Low_complexity Low_complexity 1 61 0 669 169 0 78 chr10 2654562 2654735 -137662030 + FLAM_C SINE Alu 1 133 0 1929 158 3 16 chr10 2654741 2655057 -137661708 - AluJb SINE Alu 0 312 1 180 167 0 28 chr10 2655807 2655843 -137660922 + L2 LINE L2 3222 3256 -16 180 263 0 66 chr10 2655980 2656056 -137660709 + L3 LINE CR1 1459 1529 -48 2192 121 7 0 chr10 2656217 2656524 -137660241 - AluSc SINE Alu 0 309 1 454 331 14 0 chr10 2657282 2657427 -137659338 - MIR SINE MIR -2 260 114 2243 69 3 17 chr10 2659054 2659345 -137657420 - AluSc SINE Alu -22 287 1 634 216 112 0 chr10 2660272 2660397 -137656368 - FAM SINE Alu -27 158 20 2050 136 3 0 chr10 2660463 2660758 -137656007 + AluSq SINE Alu 1 296 -17 2153 118 7 3 chr10 2660793 2661090 -137655675 + AluSx SINE Alu 1 298 -14 216 0 0 0 chr10 2661704 2661728 -137655037 + (CAATT)n Simple_repeat Simple_repeat 2 25 0 733 132 19 0 chr10 2662382 2662488 -137654277 - AluSq/x SINE Alu -204 109 2 223 284 43 43 chr10 2662952 2663068 -137653697 + L2 LINE L2 2170 2285 -1029 396 123 15 0 chr10 2663484 2663549 -137653216 - MER41A LTR ERV1 -86 468 403 342 217 36 0 chr10 2663763 2663929 -137652836 + (TA)n Simple_repeat Simple_repeat 1 172 0 931 236 75 78 chr10 2663993 2664404 -137652361 + MLT2D LTR ERVL 1 410 -4 27 73 0 0 chr10 2666183 2666238 -137650527 + AT_rich Low_complexity Low_complexity 1 55 0 207 292 0 42 chr10 2666281 2666377 -137650388 + (TATATG)n Simple_repeat Simple_repeat 6 97 0 249 341 0 11 chr10 2667192 2667283 -137649482 + CT-rich Low_complexity Low_complexity 4 93 0 2270 119 3 0 chr10 2667940 2668250 -137648515 + AluSp SINE Alu 1 311 -2 1999 135 4 4 chr10 2668686 2669010 -137647755 + AluSx SINE Alu 3 326 0 3174 147 18 6 chr10 2669171 2669674 -137647091 - MER75 DNA T2_type -5 509 1 576 249 125 66 chr10 2670258 2670745 -137646020 - HAL1 LINE L1 -115 2392 1877 1282 294 121 51 chr10 2670842 2670901 -137645864 - HAL1 LINE L1 -794 1713 1660 2371 95 0 0 chr10 2670901 2671197 -137645568 + AluY SINE Alu 1 296 -15 1282 294 121 51 chr10 2671197 2671916 -137644849 - HAL1 LINE L1 -847 1660 837 267 54 0 0 chr10 2671916 2671953 -137644812 + (TG)n Simple_repeat Simple_repeat 2 38 0 1282 294 121 51 chr10 2671953 2672246 -137644519 - HAL1 LINE L1 -1670 837 566 234 300 71 52 chr10 2672461 2672671 -137644094 - HAL1 LINE L1 -2266 241 28 298 320 25 16 chr10 2672859 2672981 -137643784 - MIR3 SINE MIR -31 177 55 224 283 88 38 chr10 2673909 2674068 -137642697 + L2 LINE L2 2073 2239 -1075 406 317 63 10 chr10 2674087 2674292 -137642473 - MIR SINE MIR -1 261 46 396 374 94 11 chr10 2674452 2674920 -137641845 + L2 LINE L2 2361 2867 -447 304 315 128 62 chr10 2675235 2675641 -137641124 - L2 LINE L2 -337 2977 2545 376 104 30 15 chr10 2676002 2676069 -137640696 + MADE1 DNA Mariner 13 80 0 211 246 18 0 chr10 2676481 2676538 -137640227 + GA-rich Low_complexity Low_complexity 4 61 0 271 289 104 81 chr10 2677479 2677716 -137639049 + L1MC4 LINE L1 6197 6427 -1466 2275 115 3 0 chr10 2677716 2678020 -137638745 + AluSx SINE Alu 1 305 -7 271 289 104 81 chr10 2678020 2678350 -137638415 + L1MC4 LINE L1 6427 6862 -1031 186 103 0 0 chr10 2679360 2679389 -137637376 + (TATATG)n Simple_repeat Simple_repeat 4 32 0 344 307 102 49 chr10 2679433 2679638 -137637127 + HAL1b LINE L1 392 607 -741 2295 143 28 6 chr10 2679653 2680009 -137636756 - THE1B LTR MaLR 0 364 1 593 90 0 0 chr10 2680796 2680874 -137635891 - MADE1 DNA Mariner -2 78 1 235 170 21 0 chr10 2683760 2683807 -137632958 + T-rich Low_complexity Low_complexity 2 49 0 2085 182 57 25 chr10 2685103 2686221 -137630544 + L1MB2 LINE L1 30 1381 -5003 1962 241 66 9 chr10 2686214 2687257 -137629508 + L1MB2 LINE L1 2239 3345 -3037 * 4180 196 38 50 chr10 2687416 2688645 -137628120 + L1MB2 LINE L1 4266 5479 -903 3033 180 30 9 chr10 2688645 2689274 -137627491 + L1MB2 LINE L1 5756 6397 -10 201 277 106 21 chr10 2689824 2689918 -137626847 - MIR3 SINE MIR -95 113 12 180 222 0 0 chr10 2690674 2690710 -137626055 - L2 LINE L2 -5 3308 3273 222 294 35 35 chr10 2690883 2690968 -137625797 + L2 LINE L2 3179 3263 -9 1722 201 31 3 chr10 2690976 2691330 -137625435 + MLT1A1 LTR MaLR 2 365 0 21 36 0 0 chr10 2691710 2691738 -137625027 + AT_rich Low_complexity Low_complexity 1 28 0 4768 86 5 5 chr10 2691748 2692401 -137624364 + L1PA10 LINE L1 5506 6158 -10 235 260 31 31 chr10 2692498 2692625 -137624140 + L1ME LINE L1 5762 5888 -233 258 231 0 0 chr10 2693202 2693267 -137623498 + (CA)n Simple_repeat Simple_repeat 2 66 0 356 289 46 43 chr10 2693357 2693637 -137623128 + L1ME3A LINE L1 5676 5956 -214 1239 113 5 0 chr10 2693739 2693925 -137622840 + THE1C LTR MaLR 1 187 -188 670 219 114 0 chr10 2693925 2694126 -137622639 + L1M4 LINE L1 2451 2674 -3472 1297 254 81 40 chr10 2694271 2694595 -137622170 + L1M4 LINE L1 2897 3206 -2940 180 0 0 0 chr10 2694595 2694615 -137622150 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1297 254 81 40 chr10 2694615 2695204 -137621561 + L1M4 LINE L1 3206 3847 -2299 505 340 43 24 chr10 2695210 2695631 -137621134 + L1MA9 LINE L1 2 430 -5711 314 384 88 16 chr10 2695803 2696110 -137620655 + L1MA9 LINE L1 428 756 -5455 1818 208 38 25 chr10 2696136 2696725 -137620040 + L1MA9 LINE L1 867 1461 -4680 840 215 20 5 chr10 2696721 2696921 -137619844 + L1MA9 LINE L1 4954 5156 -1054 * 5424 44 5 2 chr10 2696922 2697963 -137618802 - SVA Other Other -954 1384 16 207 0 0 0 chr10 2698063 2698086 -137618679 + (GGGAGA)n Simple_repeat Simple_repeat 4 26 0 2209 190 23 23 chr10 2698097 2698799 -137617966 + L1MA9 LINE L1 5152 5857 -498 226 248 30 20 chr10 2698806 2698907 -137617858 + (TA)n Simple_repeat Simple_repeat 2 103 0 858 185 54 0 chr10 2698921 2699149 -137617616 + L1MA9 LINE L1 5870 6131 -101 2719 216 55 4 chr10 2699149 2699776 -137616989 + L1MB7 LINE L1 5297 5965 -219 1423 114 139 147 chr10 2699776 2699937 -137616828 + MSTA LTR MaLR 1 162 -266 2237 121 0 0 chr10 2699937 2700242 -137616523 + AluSx SINE Alu 1 305 -7 1423 114 139 147 chr10 2700242 2700510 -137616255 + MSTA LTR MaLR 162 427 -1 2719 216 55 4 chr10 2700510 2700589 -137616176 + L1MB7 LINE L1 5965 6039 -145 229 297 0 0 chr10 2700593 2700667 -137616098 + L1MB7 LINE L1 6093 6166 -18 1287 247 34 36 chr10 2701077 2701651 -137615114 + L1ME LINE L1 5163 5739 -425 588 296 100 17 chr10 2703074 2703304 -137613461 + MIR SINE MIR 3 251 -11 297 0 0 0 chr10 2704677 2704710 -137612055 + (TA)n Simple_repeat Simple_repeat 2 34 0 1181 74 4 8 chr10 2704929 2705191 -137611574 + (TTTC)n Simple_repeat Simple_repeat 1 261 0 1831 122 0 0 chr10 2705194 2705441 -137611324 - AluSx SINE Alu -24 288 42 22 70 0 0 chr10 2708863 2708906 -137607859 + AT_rich Low_complexity Low_complexity 1 43 0 338 218 0 0 chr10 2709415 2709502 -137607263 + L1MA9 LINE L1 6290 6376 0 227 208 0 19 chr10 2710234 2710287 -137606478 + GA-rich Low_complexity Low_complexity 2 53 0 24 32 0 0 chr10 2711100 2711131 -137605634 + AT_rich Low_complexity Low_complexity 1 31 0 771 213 29 33 chr10 2711140 2711397 -137605368 + MLT1A2 LTR MaLR 179 374 0 2226 275 182 17 chr10 2711432 2712426 -137604339 + L1MDa LINE L1 44 1201 -5339 1439 205 76 12 chr10 2712417 2712827 -137603938 + L1MDa LINE L1 1808 2243 -4297 * 180 0 0 0 chr10 2712931 2712951 -137603814 + (GA)n Simple_repeat Simple_repeat 2 21 0 2128 122 0 0 chr10 2712958 2713254 -137603511 - AluSx SINE Alu -14 298 3 1835 158 27 27 chr10 2713256 2713624 -137603141 - Tigger2a DNA MER2_type -66 368 1 457 234 102 15 chr10 2713699 2713964 -137602801 + L1MDa LINE L1 3288 3575 -2965 28 29 0 0 chr10 2714149 2714184 -137602581 + AT_rich Low_complexity Low_complexity 1 35 0 415 326 43 66 chr10 2714630 2715192 -137601573 - L2 LINE L2 -1 3312 2766 21 0 0 0 chr10 2715348 2715369 -137601396 + AT_rich Low_complexity Low_complexity 1 21 0 2007 149 0 13 chr10 2715369 2715670 -137601095 - AluSx SINE Alu -15 297 1 2584 62 0 0 chr10 2717493 2717798 -137598967 - AluY SINE Alu -6 305 1 198 0 0 0 chr10 2718610 2718632 -137598133 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 2087 121 0 0 chr10 2718634 2718915 -137597850 - AluSx SINE Alu -31 281 1 26 23 0 23 chr10 2719125 2719139 -137597626 + AT_rich Low_complexity Low_complexity 1 14 -29 2114 102 3 3 chr10 2719139 2719423 -137597342 + AluSg1 SINE Alu 1 284 -25 26 23 0 23 chr10 2719423 2719452 -137597313 + AT_rich Low_complexity Low_complexity 14 43 0 201 302 47 38 chr10 2721470 2721576 -137595189 - L3b LINE CR1 -209 1374 1268 183 293 0 17 chr10 2721696 2721754 -137595011 - L3 LINE CR1 -413 1164 1108 1521 209 42 45 chr10 2721836 2721976 -137594789 - L1MA7 LINE L1 -1 6290 6151 267 31 0 0 chr10 2721976 2722008 -137594757 + (TG)n Simple_repeat Simple_repeat 1 32 0 1521 209 42 45 chr10 2722008 2722292 -137594473 - L1MA7 LINE L1 -140 6151 5867 876 203 38 38 chr10 2722631 2722867 -137593898 + L1MCa LINE L1 21 256 -6170 * 1037 227 82 9 chr10 2722866 2723183 -137593582 + L1MCa LINE L1 787 1126 -5300 1729 153 7 7 chr10 2723412 2723687 -137593078 + AluJo SINE Alu 1 275 -37 329 277 31 15 chr10 2724933 2725063 -137591702 + MLT1H LTR MaLR 392 523 -26 358 165 54 64 chr10 2725172 2725293 -137591472 - MLT1I LTR MaLR 0 595 280 313 302 38 0 chr10 2726833 2726939 -137589826 - L1MC4 LINE L1 -1340 6702 6593 210 116 23 23 chr10 2727281 2727324 -137589441 + T-rich Low_complexity Low_complexity 5 47 0 187 54 54 0 chr10 2727485 2727522 -137589243 + (TA)n Simple_repeat Simple_repeat 1 39 0 282 157 58 25 chr10 2727702 2727888 -137588877 + (TA)n Simple_repeat Simple_repeat 1 192 0 1297 255 42 0 chr10 2728805 2729138 -137587627 + MER7A DNA MER2_type 1 345 -1 2293 219 16 66 chr10 2729223 2729651 -137587114 + MER82 DNA MER2_type 1 384 -269 2135 135 0 0 chr10 2729651 2729980 -137586785 + AluSx SINE Alu 1 312 0 2293 219 16 66 chr10 2729980 2730230 -137586535 + MER82 DNA MER2_type 384 645 -8 236 279 15 0 chr10 2730305 2730373 -137586392 + MER46C DNA MER2_type 261 329 -9 1397 279 143 20 chr10 2730870 2731612 -137585153 + MER97b DNA MER1_type? 4 836 -217 34 72 0 0 chr10 2731816 2731885 -137584880 + AT_rich Low_complexity Low_complexity 1 69 0 * 264 187 77 66 chr10 2731865 2731956 -137584809 + MER97a DNA MER1_type? 795 886 -8 276 186 114 0 chr10 2732949 2733019 -137583746 - MER116 DNA Mariner -2 78 1 1768 144 3 144 chr10 2733114 2733504 -137583261 - MER1B DNA MER1_type -2 335 1 527 304 126 34 chr10 2733901 2734284 -137582481 + L2 LINE L2 1520 1945 -1369 1464 237 62 27 chr10 2734284 2734735 -137582030 - MLT1C LTR MaLR 0 467 1 527 304 126 34 chr10 2734735 2734765 -137582000 + L2 LINE L2 1945 1971 -1343 861 234 7 57 chr10 2734769 2735051 -137581714 + MLT1B LTR MaLR 1 268 -122 302 277 66 7 chr10 2735051 2735188 -137581577 + L2 LINE L2 2332 2476 -838 1113 128 122 0 chr10 2735196 2735376 -137581389 - AluJb SINE Alu -25 287 86 339 330 130 15 chr10 2735477 2735870 -137580895 + L2 LINE L2 2622 3066 -247 2697 35 3 0 chr10 2738807 2739117 -137577648 - AluY SINE Alu 0 311 1 24 0 0 0 chr10 2739318 2739342 -137577423 + GC_rich Low_complexity Low_complexity 1 24 0 261 83 0 0 chr10 2739835 2739871 -137576894 + (TG)n Simple_repeat Simple_repeat 2 37 0 1988 239 54 25 chr10 2739934 2740600 -137576165 + L1MC/D LINE L1 3808 4492 -1654 1780 230 91 16 chr10 2740592 2741267 -137575498 + L1MC/D LINE L1 5082 5807 -435 * 212 313 48 36 chr10 2741398 2741481 -137575284 + L2 LINE L2 3146 3229 -43 225 240 0 0 chr10 2741639 2741714 -137575051 + (TA)n Simple_repeat Simple_repeat 1 75 0 659 126 14 28 chr10 2742391 2742534 -137574231 + GA-rich Low_complexity Low_complexity 4 144 0 630 266 123 64 chr10 2744950 2745447 -137571318 - MLT1H LTR MaLR 0 549 24 22 35 0 0 chr10 2747285 2747314 -137569451 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr10 2748407 2748439 -137568326 + AT_rich Low_complexity Low_complexity 1 32 0 1861 193 75 2 chr10 2748444 2748843 -137567922 + MSTA LTR MaLR 1 428 0 23 33 0 0 chr10 2749379 2749409 -137567356 + AT_rich Low_complexity Low_complexity 1 30 0 1751 179 26 13 chr10 2749426 2749734 -137567031 + AluJo SINE Alu 1 312 0 2193 201 47 43 chr10 2749975 2750488 -137566277 - LTR40a LTR ERVL 0 519 5 1945 139 3 3 chr10 2750535 2750830 -137565935 - AluSx SINE Alu -17 295 1 299 304 13 0 chr10 2750837 2750916 -137565849 - L2 LINE L2 -17 3255 3176 264 350 53 0 chr10 2752176 2752382 -137564383 - LTR33 LTR ERVL 0 521 305 237 239 33 54 chr10 2753014 2753106 -137563659 - MER5B DNA MER1_type -12 166 77 1414 150 24 8 chr10 2754213 2754460 -137562305 + L1MA4 LINE L1 6042 6292 -8 21 36 0 0 chr10 2754999 2755027 -137561738 + AT_rich Low_complexity Low_complexity 1 28 0 5464 102 11 7 chr10 2756616 2757414 -137559351 - L1PA14 LINE L1 -123 6038 5237 1492 160 29 64 chr10 2758341 2758524 -137558241 - AluJb SINE Alu -10 302 133 2259 111 3 13 chr10 2758524 2758839 -137557926 - AluSx SINE Alu 0 312 1 1492 160 29 64 chr10 2758839 2758968 -137557797 - AluJb SINE Alu -179 133 1 200 244 90 13 chr10 2759252 2759330 -137557435 + MIR3 SINE MIR 121 204 -4 478 239 26 0 chr10 2759559 2759676 -137557089 + MER58B DNA MER1_type 222 341 0 407 351 52 0 chr10 2759867 2760041 -137556724 + MIR SINE MIR 74 256 -6 216 0 0 0 chr10 2760052 2760076 -137556689 + (CA)n Simple_repeat Simple_repeat 2 25 0 801 185 0 0 chr10 2761559 2761737 -137555028 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 733 317 16 12 chr10 2762325 2762568 -137554197 - MIR SINE MIR -3 259 16 230 227 41 21 chr10 2762668 2762765 -137554000 + (TA)n Simple_repeat Simple_repeat 1 99 0 255 31 0 0 chr10 2762906 2762938 -137553827 + (A)n Simple_repeat Simple_repeat 1 32 0 216 217 17 17 chr10 2764435 2764495 -137552270 + (CA)n Simple_repeat Simple_repeat 1 60 0 1848 141 0 0 chr10 2765000 2765262 -137551503 + AluSx SINE Alu 46 307 -5 183 80 0 0 chr10 2765287 2765312 -137551453 + (CAA)n Simple_repeat Simple_repeat 1 25 0 2776 96 8 11 chr10 2767803 2768168 -137548597 - THE1B LTR MaLR 0 364 1 207 319 29 0 chr10 2768349 2768418 -137548347 + MIR SINE MIR 56 126 -136 30 27 0 0 chr10 2769303 2769340 -137547425 + AT_rich Low_complexity Low_complexity 1 37 0 222 313 36 12 chr10 2770521 2770604 -137546161 + MIR3 SINE MIR 15 99 -109 264 358 80 0 chr10 2771795 2771946 -137544819 + HERV16 LTR ERVL 1412 1574 -3422 1428 343 48 50 chr10 2772092 2773076 -137543689 + HERV16 LTR ERVL 2380 3091 -1905 189 180 0 0 chr10 2773737 2773787 -137542978 + A-rich Low_complexity Low_complexity 1 50 0 337 213 67 0 chr10 2775031 2775106 -137541659 + Tigger3(Golem) DNA MER2_type 1 80 -2949 483 229 38 0 chr10 2775235 2775340 -137541425 + Tigger3(Golem) DNA MER2_type 2921 3029 0 225 267 17 0 chr10 2776211 2776271 -137540494 + (TG)n Simple_repeat Simple_repeat 2 62 0 268 313 146 30 chr10 2776837 2777070 -137539695 + L3 LINE CR1 701 960 -617 486 206 199 0 chr10 2777429 2777560 -137539205 - MER45A DNA AcHobo -19 159 3 2719 207 51 3 chr10 2777709 2778302 -137538463 - L1MB3 LINE L1 -15 6168 5548 694 224 42 21 chr10 2778297 2778538 -137538227 - L1MB3 LINE L1 -3261 2885 2640 * 1236 217 44 0 chr10 2778561 2778833 -137537932 - L1M3 LINE L1 -624 6519 6236 * 4216 248 92 33 chr10 2778830 2781477 -137535288 - L1M3 LINE L1 -2105 5001 1977 1854 189 0 0 chr10 2781477 2781778 -137534987 - AluSx SINE Alu -6 306 6 4216 248 92 33 chr10 2781778 2782521 -137534244 - L1M3 LINE L1 -5129 1977 1279 273 309 16 16 chr10 2782915 2783038 -137533727 - L1M3 LINE L1 -6903 127 5 232 197 115 0 chr10 2783047 2783108 -137533657 + MLT1F LTR MaLR 475 542 0 2379 150 28 14 chr10 2783398 2783757 -137533008 - THE1B LTR MaLR 0 364 1 1262 181 110 13 chr10 2784365 2784689 -137532076 - Tigger1 DNA MER2_type 0 2418 1 2228 110 0 0 chr10 2786214 2786514 -137530251 - AluSx SINE Alu -12 300 1 25 31 0 0 chr10 2787811 2787843 -137528922 + AT_rich Low_complexity Low_complexity 1 32 0 348 248 8 56 chr10 2788088 2788213 -137528552 + MER58 DNA MER1_type 2301 2419 -1 2311 88 0 0 chr10 2788473 2788768 -137527997 + AluY SINE Alu 1 295 -16 207 273 0 0 chr10 2789249 2789293 -137527472 + MIR SINE MIR 219 262 0 22 56 0 0 chr10 2789753 2789789 -137526976 + AT_rich Low_complexity Low_complexity 1 36 0 1794 121 7 78 chr10 2789790 2790097 -137526668 - AluSg SINE Alu -25 285 1 819 127 32 16 chr10 2790208 2790334 -137526431 + L1PA8A LINE L1 6004 6131 0 416 106 0 30 chr10 2790359 2790425 -137526340 + L2 LINE L2 3250 3313 0 662 301 81 31 chr10 2791097 2791456 -137525309 + L1ME3A LINE L1 5740 6116 -54 334 279 99 83 chr10 2793322 2793805 -137522960 + MLT1H LTR MaLR 10 500 -49 226 228 110 118 chr10 2794033 2794169 -137522596 + MLT1I LTR MaLR 249 383 -26 1231 122 5 46 chr10 2794230 2794427 -137522338 - L1PA8A LINE L1 -2 6129 5941 2488 72 0 3 chr10 2794457 2794764 -137522001 + AluY SINE Alu 6 311 0 359 327 9 9 chr10 2794767 2794874 -137521891 - MIR SINE MIR -141 121 15 255 103 0 0 chr10 2795383 2795422 -137521343 + (TTTTA)n Simple_repeat Simple_repeat 4 42 0 321 243 157 29 chr10 2796225 2796365 -137520400 - L2 LINE L2 -4 3309 3152 2166 96 4 0 chr10 2796386 2796666 -137520099 - AluSc SINE Alu -28 281 1 4789 85 2 0 chr10 2797200 2797800 -137518965 - L1PA8 LINE L1 0 6172 5572 273 233 80 20 chr10 2798702 2798817 -137517948 + MLT1J LTR MaLR 46 181 -290 324 333 81 38 chr10 2799078 2799144 -137517621 + L1ME3A LINE L1 5680 5742 -428 2077 130 10 0 chr10 2799144 2799443 -137517322 + AluSg SINE Alu 5 306 -4 324 333 81 38 chr10 2799443 2799637 -137517128 + L1ME3A LINE L1 5742 5951 -219 1568 204 68 19 chr10 2799651 2800018 -137516747 - MLT1B LTR MaLR -2 388 4 900 124 49 27 chr10 2900230 2900455 -137416310 + AluY SINE Alu 81 310 -1 180 111 0 0 chr10 2900999 2901026 -137415739 + (CATATA)n Simple_repeat Simple_repeat 2 28 0 2219 223 43 8 chr10 2902469 2902976 -137413789 - MER74A LTR ERVL 0 558 34 2050 98 3 57 chr10 2903346 2903662 -137413103 + AluSg SINE Alu 1 299 -11 4480 207 44 27 chr10 2904335 2904482 -137412283 - L1MB7 LINE L1 -9 6175 6032 2352 81 0 0 chr10 2904482 2904790 -137411975 + AluY SINE Alu 1 308 -3 4480 207 44 27 chr10 2904790 2906566 -137410199 - L1MB7 LINE L1 -152 6032 4219 343 308 39 0 chr10 2906581 2906711 -137410054 - MIR SINE MIR -6 256 122 875 240 56 65 chr10 2907719 2908248 -137408517 + MLT1E LTR MaLR 21 593 0 270 0 0 0 chr10 2908395 2908425 -137408340 + (A)n Simple_repeat Simple_repeat 1 30 0 234 263 0 0 chr10 2908745 2908802 -137407963 + (CA)n Simple_repeat Simple_repeat 1 57 0 297 276 162 17 chr10 2909300 2909448 -137407317 - MER5A DNA MER1_type -5 184 7 1211 223 51 3 chr10 2910657 2910832 -137405933 - AluJb SINE Alu -5 307 111 270 0 0 0 chr10 2910832 2910862 -137405903 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 1211 223 51 3 chr10 2910862 2910978 -137405787 - AluJb SINE Alu -201 111 2 1740 170 10 0 chr10 2911170 2911470 -137405295 - AluJo SINE Alu -9 303 1 867 157 4 6 chr10 2912332 2913053 -137403712 + (CTCA)n Simple_repeat Simple_repeat 1 720 0 922 163 3 12 chr10 2913073 2913110 -137403655 + (CTCA)n Simple_repeat Simple_repeat 1 37 -1675 6122 114 25 28 chr10 2913110 2914082 -137402683 + LTR5 LTR ERVK 1 969 0 922 163 3 12 chr10 2914082 2914801 -137401964 + (CTCA)n Simple_repeat Simple_repeat 37 1712 0 237 337 116 35 chr10 2914802 2915173 -137401592 - L2 LINE L2 -1 3312 2912 207 310 14 0 chr10 2915629 2915700 -137401065 + MIR SINE MIR 158 229 -33 1942 138 50 44 chr10 2916080 2916442 -137400323 + THE1B LTR MaLR 1 364 0 335 215 223 8 chr10 2916629 2916759 -137400006 + MER104 DNA Tc2 18 175 -5 2000 115 3 16 chr10 2916818 2917131 -137399634 + AluSp SINE Alu 1 309 -4 293 246 125 82 chr10 2917397 2917629 -137399136 - L1ME LINE L1 -315 5855 5614 268 278 90 21 chr10 2918192 2918336 -137398429 - L1MEd LINE L1 -5961 158 5 1846 147 0 28 chr10 2918437 2918757 -137398008 + AluSx SINE Alu 1 311 -1 810 184 0 0 chr10 2920092 2920271 -137396494 + GA-rich Low_complexity Low_complexity 1 179 0 662 268 45 15 chr10 2920931 2921129 -137395636 + MER20 DNA MER1_type 16 219 0 1938 99 50 7 chr10 2921460 2921743 -137395022 - AluSx SINE Alu -17 295 1 3676 25 0 7 chr10 2922478 2922912 -137393853 - L1PA5 LINE L1 0 6154 5724 297 83 0 33 chr10 2923130 2923190 -137393575 - L1MA4A LINE L1 -1 6302 6245 227 231 46 0 chr10 2923199 2923264 -137393501 - L1MB4 LINE L1 -2 6178 6111 1293 219 77 41 chr10 2923298 2923417 -137393348 - L1MA4 LINE L1 -294 6006 5893 2055 98 3 7 chr10 2923417 2923714 -137393051 - AluSq SINE Alu -13 300 5 1293 219 77 41 chr10 2923714 2923982 -137392783 - L1MA4 LINE L1 -407 5893 5605 711 158 29 53 chr10 2923981 2924137 -137392628 - L1MA4 LINE L1 -44 6256 6105 * 215 211 21 42 chr10 2924140 2924235 -137392530 + (TTATA)n Simple_repeat Simple_repeat 2 94 0 1266 165 29 98 chr10 2924250 2924596 -137392169 - L1MA4 LINE L1 -192 6108 5787 484 194 43 0 chr10 2924596 2924703 -137392062 + L1ME LINE L1 5724 5834 -287 1446 152 115 0 chr10 2926018 2926287 -137390478 + AluSx SINE Alu 2 301 -11 590 132 0 0 chr10 2927761 2927852 -137388913 + AluSg/x SINE Alu 217 307 -2 1785 175 62 73 chr10 2927879 2928318 -137388447 + Tigger2a DNA MER2_type 1 434 0 243 0 0 0 chr10 2928763 2928790 -137387975 + (CA)n Simple_repeat Simple_repeat 2 28 0 206 235 0 10 chr10 2928791 2928889 -137387876 + GA-rich Low_complexity Low_complexity 2 98 0 294 239 0 0 chr10 2928908 2929021 -137387744 + GA-rich Low_complexity Low_complexity 2 114 0 1809 196 38 30 chr10 2929466 2929598 -137387167 + MSTD LTR MaLR 1 130 -266 2302 93 0 3 chr10 2929598 2929910 -137386855 - AluY SINE Alu 0 311 1 1809 196 38 30 chr10 2929910 2930170 -137386595 + MSTD LTR MaLR 130 396 0 857 297 26 62 chr10 2930946 2931438 -137385327 + MLT1J LTR MaLR 1 511 0 234 263 53 13 chr10 2931510 2931586 -137385179 - MIR3 SINE MIR -23 185 107 1215 126 16 11 chr10 2931606 2931796 -137384969 - MER4C LTR ERV1 0 465 275 213 282 0 0 chr10 2931852 2932026 -137384739 + G-rich Low_complexity Low_complexity 5 178 0 1739 147 47 13 chr10 2932070 2932369 -137384396 - MER4C LTR ERV1 -156 309 1 2411 86 28 81 chr10 2933429 2933826 -137382939 + MER51B LTR ERV1 2 377 0 2428 83 3 10 chr10 2933856 2934169 -137382596 - AluY SINE Alu 0 311 1 298 274 53 26 chr10 2935753 2935866 -137380899 - MER112 DNA MER1_type -58 202 87 2211 136 0 0 chr10 2936458 2936759 -137380006 + AluSx SINE Alu 1 304 -8 351 0 0 0 chr10 2936759 2936798 -137379967 + (TA)n Simple_repeat Simple_repeat 2 40 0 2043 140 0 7 chr10 2936821 2937107 -137379658 - AluJo SINE Alu -26 286 3 2079 120 3 0 chr10 2937867 2938150 -137378615 + AluSq SINE Alu 1 284 -29 2084 276 82 47 chr10 2938524 2938947 -137377818 - L1ME1 LINE L1 -5 6161 5754 3804 50 2 4 chr10 2938947 2939443 -137377322 + L1PA3 LINE L1 5660 6154 -1 2084 276 82 47 chr10 2939443 2939485 -137377280 - L1ME1 LINE L1 -412 5754 5715 1751 157 0 83 chr10 2939485 2939823 -137376942 - AluJo SINE Alu 0 312 3 2084 276 82 47 chr10 2939823 2940487 -137376278 - L1ME1 LINE L1 -451 5715 5076 2409 61 6 52 chr10 2940487 2940813 -137375952 - AluY SINE Alu 0 311 1 1187 55 0 22 chr10 2940816 2940997 -137375768 + (TTTC)n Simple_repeat Simple_repeat 4 180 0 2084 276 82 47 chr10 2940997 2941279 -137375486 - L1ME1 LINE L1 -1091 5075 4693 549 170 9 9 chr10 2941374 2941480 -137375285 - AluSp/q SINE Alu 0 313 208 784 159 0 0 chr10 2942297 2942429 -137374336 + FLAM_C SINE Alu 1 132 -1 198 305 179 13 chr10 2943218 2943369 -137373396 - MIR SINE MIR -1 261 86 1559 173 41 11 chr10 2943455 2943595 -137373170 - AluJo SINE Alu -38 274 140 243 0 0 0 chr10 2943595 2943622 -137373143 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1559 173 41 11 chr10 2943622 2943747 -137373018 - AluJo SINE Alu -172 140 1 207 0 0 0 chr10 2944066 2944089 -137372676 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 222 118 0 0 chr10 2944124 2944158 -137372607 + (T)n Simple_repeat Simple_repeat 1 34 0 186 277 84 0 chr10 2944582 2944665 -137372100 - MIR SINE MIR -113 149 60 197 304 51 0 chr10 2944698 2944777 -137371988 + L2 LINE L2 3179 3261 -11 1963 133 3 11 chr10 2946526 2946839 -137369926 - AluSx SINE Alu 0 311 1 181 219 94 0 chr10 2947087 2947151 -137369614 - L2 LINE L2 -516 2798 2729 183 80 0 0 chr10 2947180 2947205 -137369560 + (GGGGA)n Simple_repeat Simple_repeat 3 27 0 3420 114 8 4 chr10 2947517 2948026 -137368739 - MER9 LTR ERVK 0 511 1 225 196 0 0 chr10 2948246 2948292 -137368473 - Charlie5 DNA MER1_type -17 2595 2550 1825 169 3 10 chr10 2948319 2948621 -137368144 + AluJo SINE Alu 3 302 -10 1052 25 0 0 chr10 2948624 2948744 -137368021 + AluYb8 SINE Alu 199 318 0 293 262 79 0 chr10 2948769 2948895 -137367870 - Charlie5 DNA MER1_type -114 2498 2363 351 249 66 95 chr10 2949092 2949441 -137367324 + L2 LINE L2 2951 3289 -24 2523 76 0 19 chr10 2949947 2950262 -137366503 - AluSc SINE Alu 0 309 1 196 333 40 30 chr10 2951319 2951418 -137365347 + MIR SINE MIR 34 133 -129 227 216 162 0 chr10 2951666 2951740 -137365025 + MER5A DNA MER1_type 42 127 -62 2584 55 0 0 chr10 2951938 2952230 -137364535 - AluY SINE Alu -19 292 1 1290 266 130 40 chr10 2953476 2954333 -137362432 + L1ME1 LINE L1 5214 6150 -16 1542 109 0 0 chr10 2954590 2954792 -137361973 - AluY SINE Alu 0 311 110 1853 154 3 39 chr10 2956192 2956503 -137360262 + AluJb SINE Alu 1 300 -12 181 289 52 31 chr10 2961836 2961933 -137354832 + MIR SINE MIR 152 250 -12 427 263 143 19 chr10 2962830 2963039 -137353726 - MIR SINE MIR -19 243 9 21 36 0 0 chr10 2963525 2963553 -137353212 + AT_rich Low_complexity Low_complexity 1 28 0 1849 182 3 6 chr10 2963564 2963877 -137352888 - AluJo SINE Alu 0 312 1 1696 159 32 0 chr10 2967178 2967455 -137349310 + AluJo SINE Alu 16 301 -11 979 202 214 9 chr10 2967964 2968399 -137348366 + Tigger7 DNA MER2_type 1 2479 -8 738 148 42 7 chr10 2968571 2968713 -137348052 + AluJb SINE Alu 136 282 -30 222 128 0 0 chr10 2968731 2968770 -137347995 + (TAGG)n Simple_repeat Simple_repeat 1 39 0 2169 98 0 4 chr10 2972138 2972413 -137344352 - AluSc SINE Alu -35 274 1 337 276 45 45 chr10 2973519 2973675 -137343090 + L1M4 LINE L1 3691 3846 -2300 190 284 74 21 chr10 2974329 2974424 -137342341 + MIR3 SINE MIR 9 108 -100 2138 129 0 0 chr10 2974666 2974953 -137341812 + AluSx SINE Alu 1 287 -25 1301 176 38 31 chr10 2975322 2975583 -137341182 + Tigger7 DNA MER2_type 5 267 -466 316 261 11 11 chr10 2975580 2975672 -137341093 + Tigger7 DNA MER2_type 2388 2479 -8 * 242 240 0 0 chr10 2976035 2976085 -137340680 - L2 LINE L2 -2 3270 3221 2306 110 0 7 chr10 2976638 2976946 -137339819 + AluSx SINE Alu 1 306 -6 775 194 203 13 chr10 2977022 2977254 -137339511 - Tigger3(Golem) DNA MER2_type 0 3038 2763 36 62 0 0 chr10 2977271 2977335 -137339430 + AT_rich Low_complexity Low_complexity 1 64 0 289 159 286 0 chr10 2977351 2977414 -137339351 - Tigger3(Golem) DNA MER2_type -2947 82 2 2260 97 10 0 chr10 2977541 2977830 -137338935 + AluSg SINE Alu 2 293 -17 225 90 15 134 chr10 2979557 2979624 -137337141 + MLT1E2 LTR MaLR 2 60 -566 373 241 77 65 chr10 2980096 2980266 -137336499 + L2 LINE L2 3095 3266 -6 248 351 38 5 chr10 2984142 2984353 -137332412 + MER46C DNA MER2_type 121 338 0 417 295 74 0 chr10 2985417 2985607 -137331158 - MER20 DNA MER1_type 0 219 16 1868 161 3 19 chr10 2986280 2986597 -137330168 + AluJb SINE Alu 1 312 0 1094 161 0 0 chr10 2987578 2987746 -137329019 + AluJb SINE Alu 134 301 -11 2498 77 3 0 chr10 2989006 2989316 -137327449 - AluSx SINE Alu -1 311 1 530 154 11 0 chr10 2990343 2990434 -137326331 - AluSc SINE Alu -213 96 5 396 299 62 14 chr10 2992765 2992976 -137323789 + L2 LINE L2 2050 2270 -1044 440 297 175 25 chr10 2993464 2993818 -137322947 + L2 LINE L2 2396 2802 -512 207 271 66 74 chr10 2994077 2994175 -137322590 + L2 LINE L2 3182 3280 -33 2391 101 0 0 chr10 2994175 2994472 -137322293 + AluSx SINE Alu 1 297 -15 207 271 66 74 chr10 2994472 2994495 -137322270 + L2 LINE L2 3280 3302 -11 343 280 136 0 chr10 2994580 2994705 -137322060 + MIR SINE MIR 111 252 -10 1470 127 0 51 chr10 2995763 2995999 -137320766 + AluSx SINE Alu 7 230 -82 362 322 96 0 chr10 2996953 2997099 -137319666 + MIR SINE MIR 87 246 -16 368 309 3 3 chr10 2997266 2997639 -137319126 + (CA)n Simple_repeat Simple_repeat 1 373 0 275 258 12 12 chr10 2997657 2997820 -137318945 + (CA)n Simple_repeat Simple_repeat 2 164 0 261 219 0 0 chr10 2997910 2997983 -137318782 + (CA)n Simple_repeat Simple_repeat 2 74 0 2261 74 7 58 chr10 2998138 2998447 -137318318 + AluY SINE Alu 1 293 -18 250 339 17 17 chr10 3000415 3000533 -137316232 + MIR3 SINE MIR 86 203 -5 590 239 3 43 chr10 3001641 3001994 -137314771 + G-rich Low_complexity Low_complexity 1 338 0 222 301 0 46 chr10 3002006 3002159 -137314606 + (CTAGGG)n Simple_repeat Simple_repeat 1 146 0 218 295 0 39 chr10 3002661 3002739 -137314026 + G-rich Low_complexity Low_complexity 1 75 0 1581 160 82 7 chr10 3005589 3005871 -137310894 - AluJo SINE Alu -9 303 1 1910 92 0 82 chr10 3006539 3006842 -137309923 + AluSx SINE Alu 35 312 0 180 0 0 0 chr10 3007835 3007855 -137308910 + (T)n Simple_repeat Simple_repeat 1 20 0 308 64 21 0 chr10 3008633 3008680 -137308085 + (CA)n Simple_repeat Simple_repeat 1 48 0 2312 100 0 0 chr10 3009748 3010037 -137306728 - AluSg SINE Alu -21 289 1 28 0 0 0 chr10 3011467 3011495 -137305270 + GC_rich Low_complexity Low_complexity 1 28 0 216 170 0 0 chr10 3011543 3011596 -137305169 + G-rich Low_complexity Low_complexity 6 58 0 306 342 17 8 chr10 3013527 3013647 -137303118 + MIR SINE MIR 30 150 -112 189 263 105 75 chr10 3013732 3013865 -137302900 - MIR SINE MIR -55 207 71 197 319 71 26 chr10 3014445 3014558 -137302207 - L2 LINE L2 -36 3236 3119 181 320 39 0 chr10 3014681 3014759 -137302006 - MIR SINE MIR -130 132 52 453 309 17 33 chr10 3014773 3014954 -137301811 + MIR SINE MIR 58 235 -27 1662 102 26 4 chr10 3016718 3016944 -137299821 - AluSg/x SINE Alu -9 303 73 1956 182 5 16 chr10 3016982 3017351 -137299414 + MLT1A1 LTR MaLR 1 365 0 355 275 132 18 chr10 3017451 3017618 -137299147 + MER5A DNA MER1_type 1 186 -3 1007 218 34 103 chr10 3018140 3018520 -137298245 + MLT1J LTR MaLR 1 354 -157 187 405 56 8 chr10 3018589 3018715 -137298050 - L2 LINE L2 -25 3247 3116 1167 281 49 85 chr10 3018931 3019753 -137297012 + L1MC5 LINE L1 6730 7521 -440 24 32 0 0 chr10 3021727 3021758 -137295007 + AT_rich Low_complexity Low_complexity 1 31 0 335 327 65 0 chr10 3021827 3022041 -137294724 + L1MC/D LINE L1 5576 5803 -2005 1939 158 14 0 chr10 3022279 3022576 -137294189 + AluSx SINE Alu 1 301 -11 2300 110 7 0 chr10 3022965 3023266 -137293499 + AluSc SINE Alu 1 303 -6 983 243 156 30 chr10 3023754 3024055 -137292710 + MLT2C1 LTR ERVL 1 339 -58 377 70 18 0 chr10 3024055 3024112 -137292653 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 709 265 12 0 chr10 3024114 3024284 -137292481 - ERVL LTR ERVL -5104 660 489 1707 253 48 14 chr10 3024307 3024460 -137292305 + ERVL-C1 LTR ERVL 252 398 -5366 2342 68 0 4 chr10 3024460 3024739 -137292026 - AluY SINE Alu -10 301 24 1707 253 48 14 chr10 3024739 3025024 -137291741 + ERVL-C1 LTR ERVL 398 705 -5059 331 352 31 48 chr10 3025135 3025487 -137291278 + ERVL LTR ERVL 4908 5253 -511 512 278 73 20 chr10 3025810 3026055 -137290710 + LTR16C LTR ERVL 232 489 -2 210 222 37 19 chr10 3026551 3026605 -137290160 - MIR SINE MIR -102 160 106 1895 146 0 0 chr10 3027850 3028118 -137288647 + AluSx SINE Alu 27 294 -18 205 132 57 19 chr10 3028150 3028203 -137288562 + T-rich Low_complexity Low_complexity 4 58 0 4352 96 3 0 chr10 3028224 3028840 -137287925 - L1PA10 LINE L1 -11 6157 5540 599 317 77 35 chr10 3029213 3029588 -137287177 - MLT1L LTR MaLR -224 391 1 2585 74 0 0 chr10 3029817 3030127 -137286638 - AluY SINE Alu -1 310 1 3512 211 45 22 chr10 3031351 3031700 -137285065 - L1MB3 LINE L1 -2 6181 5842 2640 52 0 3 chr10 3031700 3032008 -137284757 - AluY SINE Alu -4 307 1 3512 211 45 22 chr10 3032008 3032526 -137284239 - L1MB3 LINE L1 -341 5842 5294 1614 200 43 3 chr10 3032566 3032866 -137283899 + AluJo SINE Alu 1 312 0 2346 174 12 7 chr10 3032892 3033316 -137283449 + MSTB LTR MaLR 1 426 0 191 284 37 25 chr10 3033690 3033771 -137282994 - MIR SINE MIR -153 109 28 975 259 34 39 chr10 3033865 3034220 -137282545 - MLT2D LTR ERVL 0 414 62 316 309 32 42 chr10 3034572 3034789 -137281976 - L2 LINE L2 -5 3308 3094 265 93 481 0 chr10 3034911 3034965 -137281800 + MADE1 DNA Mariner 1 80 0 21 0 0 0 chr10 3035768 3035789 -137280976 + AT_rich Low_complexity Low_complexity 1 21 0 279 0 0 0 chr10 3036259 3036290 -137280475 + (GA)n Simple_repeat Simple_repeat 2 32 0 22 35 0 0 chr10 3036536 3036565 -137280200 + AT_rich Low_complexity Low_complexity 1 29 0 5910 140 32 1 chr10 3036713 3037890 -137278875 + L1PB2 LINE L1 4936 6149 -2 22 0 0 0 chr10 3038084 3038106 -137278659 + AT_rich Low_complexity Low_complexity 1 22 0 249 298 81 32 chr10 3038673 3038797 -137277968 - MIR SINE MIR -113 149 20 2304 105 0 7 chr10 3038849 3039153 -137277612 + AluSx SINE Alu 11 312 0 330 312 16 16 chr10 3039283 3039408 -137277357 + MIR SINE MIR 119 243 -19 23 0 0 0 chr10 3040218 3040241 -137276524 + AT_rich Low_complexity Low_complexity 1 23 0 2422 104 28 8 chr10 3040532 3040889 -137275876 - THE1B LTR MaLR 0 364 1 1498 179 42 28 chr10 3042161 3042518 -137274247 + L1MA4A LINE L1 5941 6302 -1 2583 60 0 0 chr10 3043472 3043773 -137272992 - AluY SINE Alu -7 304 4 563 291 86 42 chr10 3045199 3045608 -137271157 - MARNA DNA Mariner -134 452 26 2531 63 0 0 chr10 3046630 3046933 -137269832 + AluY SINE Alu 1 303 -8 408 252 26 43 chr10 3097642 3097757 -137219008 - L1MC4 LINE L1 -1340 6702 6590 300 271 83 10 chr10 3097681 3097777 -137218988 + L1MC3 LINE L1 6571 6673 -1112 * 1189 213 0 0 chr10 3099163 3099393 -137217372 - Tigger5 DNA MER2_type 0 2323 2094 1938 155 7 3 chr10 3100437 3100734 -137216031 - AluJo SINE Alu -14 298 1 498 226 88 13 chr10 3101434 3101582 -137215183 + MLT1B LTR MaLR 2 164 -226 1866 85 0 0 chr10 3101582 3101817 -137214948 + AluSc SINE Alu 67 301 -8 406 211 11 0 chr10 3101876 3102051 -137214714 + CT-rich Low_complexity Low_complexity 2 178 0 * 664 102 0 75 chr10 3102017 3102204 -137214561 + (TCTCTG)n Simple_repeat Simple_repeat 2 174 0 829 213 6 0 chr10 3102237 3102406 -137214359 + MLT1B LTR MaLR 205 374 -16 279 365 171 0 chr10 3103780 3103991 -137212774 + MIR SINE MIR 16 262 0 2472 96 0 6 chr10 3104317 3104629 -137212136 - AluSq SINE Alu 0 313 4 279 53 0 26 chr10 3105027 3105065 -137211700 - L2 LINE L2 -15 3298 3262 255 154 0 0 chr10 3105032 3105071 -137211694 - MIR SINE MIR -13 249 211 * 1355 37 0 0 chr10 3105263 3105425 -137211340 - L1PA5 LINE L1 -2 6152 5991 215 31 31 0 chr10 3107254 3107286 -137209479 + (TCTA)n Simple_repeat Simple_repeat 2 34 0 22 0 0 0 chr10 3107348 3107370 -137209395 + AT_rich Low_complexity Low_complexity 1 22 0 836 161 0 0 chr10 3107370 3107494 -137209271 - AluJb SINE Alu -188 124 1 813 158 68 6 chr10 3107497 3107674 -137209091 - L1MB3 LINE L1 -45 6138 5951 257 276 0 0 chr10 3108293 3108351 -137208414 + (CA)n Simple_repeat Simple_repeat 1 58 0 500 243 112 67 chr10 3108517 3108830 -137207935 + HAL1b LINE L1 554 880 -468 2193 112 0 10 chr10 3108853 3109165 -137207600 + AluSc SINE Alu 1 309 0 21 0 0 0 chr10 3109230 3109251 -137207514 + AT_rich Low_complexity Low_complexity 1 21 0 2330 110 0 3 chr10 3109259 3109567 -137207198 + AluSx SINE Alu 1 307 -5 1119 114 16 22 chr10 3109672 3109856 -137206909 - MER30B DNA MER1_type -7 183 1 1665 157 54 0 chr10 3110466 3110637 -137206128 - AluJb SINE Alu -4 308 115 266 0 0 29 chr10 3110637 3110672 -137206093 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1665 157 54 0 chr10 3110672 3110780 -137205985 - AluJb SINE Alu -197 115 14 1260 94 0 0 chr10 3111000 3111292 -137205473 + (TCCA)n Simple_repeat Simple_repeat 1 292 0 1234 116 0 9 chr10 3111305 3111665 -137205100 + (TCCA)n Simple_repeat Simple_repeat 1 536 0 306 0 0 0 chr10 3111665 3111699 -137205066 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 835 144 34 0 chr10 3111699 3111845 -137204920 - L1MA9 LINE L1 0 6312 6162 395 152 29 0 chr10 3113738 3113843 -137202922 + (CACCAT)n Simple_repeat Simple_repeat 3 110 0 274 212 25 0 chr10 3113895 3114013 -137202752 + (CACCAT)n Simple_repeat Simple_repeat 2 122 0 228 325 0 0 chr10 3114030 3114113 -137202652 + (CAT)n Simple_repeat Simple_repeat 2 84 0 738 123 9 0 chr10 3114113 3114227 -137202538 - THE1C LTR MaLR 0 375 261 465 174 26 19 chr10 3116435 3116590 -137200175 + (ATGGTG)n Simple_repeat Simple_repeat 4 159 0 367 255 0 22 chr10 3116640 3116747 -137200018 + (ATGGTG)n Simple_repeat Simple_repeat 1 109 -450 1807 133 63 84 chr10 3116747 3117129 -137199636 + THE1C LTR MaLR 2 375 0 367 255 0 22 chr10 3117129 3117212 -137199553 + (ATGGTG)n Simple_repeat Simple_repeat 109 559 0 274 212 25 0 chr10 3117229 3117347 -137199418 + (ATGGTG)n Simple_repeat Simple_repeat 2 122 0 395 152 29 0 chr10 3117399 3117504 -137199261 + (ATGGTG)n Simple_repeat Simple_repeat 3 110 0 189 297 78 0 chr10 3118070 3118134 -137198631 - MIR SINE MIR -96 166 98 32 26 0 0 chr10 3118379 3118418 -137198347 + AT_rich Low_complexity Low_complexity 1 39 0 2478 85 0 3 chr10 3118643 3118950 -137197815 + AluSx SINE Alu 1 306 -6 313 203 63 76 chr10 3119848 3120006 -137196759 - L1MC5 LINE L1 -48 7913 7758 2094 132 0 0 chr10 3120260 3120573 -137196192 + AluSx SINE Alu 1 313 0 231 271 0 17 chr10 3120730 3120789 -137195976 - L2 LINE L2 -2 3270 3213 211 312 104 24 chr10 3122074 3122199 -137194566 - L2 LINE L2 -41 3231 3097 256 324 128 0 chr10 3122236 3122338 -137194427 - MIR SINE MIR -74 188 74 303 296 55 78 chr10 3123097 3123354 -137193411 + L1ME4a LINE L1 5839 6089 -32 267 330 78 0 chr10 3124578 3124681 -137192084 - MIR3 SINE MIR -5 203 93 2180 100 4 0 chr10 3126129 3126410 -137190355 - AluSg SINE Alu -12 298 17 808 139 29 40 chr10 3126617 3126790 -137189975 + MER53 DNA DNA 1 171 -18 2254 86 38 3 chr10 3127397 3127689 -137189076 + AluY SINE Alu 1 302 -9 435 248 62 25 chr10 3127701 3127862 -137188903 - MER96B DNA MER1_type? -151 266 100 22 0 0 0 chr10 3129944 3129966 -137186799 + AT_rich Low_complexity Low_complexity 1 22 0 358 289 58 16 chr10 3131145 3131266 -137185499 - MIR SINE MIR -116 146 21 2307 89 7 3 chr10 3131750 3132043 -137184722 + AluSp SINE Alu 1 294 -19 302 304 9 18 chr10 3132772 3132884 -137183881 + (CA)n Simple_repeat Simple_repeat 2 112 0 510 168 23 12 chr10 3133136 3133309 -137183456 + (TG)n Simple_repeat Simple_repeat 1 175 0 499 151 29 17 chr10 3133362 3133534 -137183231 + (TG)n Simple_repeat Simple_repeat 1 174 0 616 167 27 6 chr10 3133606 3133944 -137182821 + (TG)n Simple_repeat Simple_repeat 1 345 0 1102 117 43 0 chr10 3134512 3134675 -137182090 + AluSc SINE Alu 129 298 -11 207 324 15 0 chr10 3136993 3137061 -137179704 + (TCCA)n Simple_repeat Simple_repeat 4 72 0 2075 121 0 0 chr10 3137911 3138208 -137178557 + AluSx SINE Alu 1 297 -15 1598 197 0 10 chr10 3138818 3139128 -137177637 + AluJb SINE Alu 1 307 -5 2219 71 0 17 chr10 3141473 3141769 -137174996 + AluY SINE Alu 7 297 -14 310 362 29 49 chr10 3142879 3143122 -137173643 - MIR SINE MIR -10 252 15 200 167 0 0 chr10 3144460 3144490 -137172275 + polypurine Low_complexity Low_complexity 3 32 0 327 272 76 11 chr10 3144663 3144755 -137172010 + MIR SINE MIR 13 110 -152 1467 181 38 2 chr10 3144798 3145169 -137171596 - MER65A LTR ERV1 0 445 4 217 323 15 0 chr10 3145169 3145234 -137171531 + MIR SINE MIR 162 227 -35 552 287 184 17 chr10 3145377 3145725 -137171040 + MLT1J LTR MaLR 104 509 -2 600 227 41 23 chr10 3146138 3146310 -137170455 + MER5B DNA MER1_type 1 175 -3 315 179 269 0 chr10 3146327 3146405 -137170360 + MER5A DNA MER1_type 8 106 -83 263 300 50 0 chr10 3147645 3147725 -137169040 - L2 LINE L2 0 3313 3230 2086 184 21 7 chr10 3147982 3148412 -137168353 + L1MB3 LINE L1 5746 6181 -2 203 77 0 26 chr10 3148455 3148494 -137168271 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 1508 149 3 73 chr10 3148497 3148799 -137167966 - AluJo SINE Alu -31 281 1 394 222 176 0 chr10 3149156 3149264 -137167501 - FLAM_C SINE Alu -1 132 6 215 31 31 0 chr10 3149764 3149796 -137166969 + (TGG)n Simple_repeat Simple_repeat 1 33 0 1848 137 7 3 chr10 3150162 3150454 -137166311 + AluSx SINE Alu 1 293 -19 247 224 60 30 chr10 3150843 3150910 -137165855 + L2 LINE L2 3204 3272 0 1333 235 30 12 chr10 3151018 3151367 -137165398 - MLT1A1 LTR MaLR -6 359 1 2117 107 3 0 chr10 3151441 3151730 -137165035 - AluSx SINE Alu -21 291 2 3259 103 50 57 chr10 3155648 3156248 -137160517 - MER4A LTR ERV1 0 600 5 583 111 0 0 chr10 3156944 3157034 -137159731 - HERVFH19I LTR ERV1 -3634 4085 3996 529 335 44 7 chr10 3157073 3157366 -137159399 - L2 LINE L2 -1226 2088 1785 278 213 50 106 chr10 3157376 3157536 -137159229 - MLT1J1 LTR MaLR -3 443 293 261 233 17 0 chr10 3157655 3157715 -137159050 - MLT1J2 LTR MaLR -321 129 69 1115 235 44 65 chr10 3157735 3158193 -137158572 + MLT2B1 LTR ERVL 2 458 -6 186 261 81 45 chr10 3158243 3158354 -137158411 - L2 LINE L2 -1559 1755 1641 194 311 126 24 chr10 3158386 3158592 -137158173 - L2 LINE L2 -1669 1645 1419 781 156 0 0 chr10 3158837 3158995 -137157770 - FRAM SINE Alu 0 183 26 284 250 60 24 chr10 3160513 3160597 -137156168 + MARNA DNA Mariner 44 130 -456 2034 103 21 0 chr10 3160649 3160930 -137155835 - AluSx SINE Alu -3 309 23 253 145 43 43 chr10 3160959 3161028 -137155737 - MARNA DNA Mariner -234 352 284 390 69 0 0 chr10 3161065 3161123 -137155642 + (TG)n Simple_repeat Simple_repeat 1 58 0 3062 217 63 25 chr10 3161728 3162810 -137153955 + L1MD2 LINE L1 4906 6032 -327 1564 245 24 37 chr10 3162817 3163282 -137153483 - MLT1C LTR MaLR -1 466 8 525 261 20 7 chr10 3163386 3163539 -137153226 + L1MD2 LINE L1 6195 6349 -10 196 236 36 18 chr10 3165665 3165720 -137151045 - L2 LINE L2 -11 3302 3247 783 134 7 13 chr10 3165884 3166033 -137150732 + (TTCC)n Simple_repeat Simple_repeat 1 148 0 1544 168 13 42 chr10 3166033 3166343 -137150422 - AluJo SINE Alu -5 307 7 1014 106 99 0 chr10 3166369 3166520 -137150245 + AluSg/x SINE Alu 135 300 -12 588 309 55 4 chr10 3166997 3167233 -137149532 - MLT1H LTR MaLR -222 327 80 192 266 0 119 chr10 3167311 3167420 -137149345 - MIR SINE MIR -79 183 88 21 36 0 0 chr10 3167740 3167768 -137148997 + AT_rich Low_complexity Low_complexity 1 28 0 2053 122 3 0 chr10 3167769 3168065 -137148700 + AluSq SINE Alu 1 297 -16 350 324 19 69 chr10 3168206 3168422 -137148343 + L1ME LINE L1 5264 5468 -2340 275 277 99 45 chr10 3170528 3170730 -137146035 - MER112 DNA MER1_type -6 254 42 1856 160 0 6 chr10 3170829 3171141 -137145624 + AluSx SINE Alu 1 310 -2 38 22 0 0 chr10 3171162 3171207 -137145558 + AT_rich Low_complexity Low_complexity 1 45 0 245 164 0 18 chr10 3171262 3171317 -137145448 + CT-rich Low_complexity Low_complexity 3 56 0 26 0 0 0 chr10 3171322 3171348 -137145417 + AT_rich Low_complexity Low_complexity 1 26 0 243 222 173 49 chr10 3173221 3173302 -137143463 - MIR SINE MIR -48 214 124 2100 103 0 7 chr10 3173304 3173616 -137143149 + AluSx SINE Alu 1 310 0 2142 82 3 7 chr10 3176448 3176739 -137140026 - AluY SINE Alu -21 290 1 924 200 44 9 chr10 3176740 3176965 -137139800 + AluJo SINE Alu 59 291 -21 409 238 153 26 chr10 3177000 3177189 -137139576 + L1ME LINE L1 5573 5785 -336 585 163 65 8 chr10 3177802 3177925 -137138840 + FLAM_C SINE Alu 2 131 -12 320 203 27 0 chr10 3177933 3178007 -137138758 - L1MC2 LINE L1 -4 6340 6265 420 111 0 0 chr10 3178462 3178525 -137138240 + (TG)n Simple_repeat Simple_repeat 1 63 0 819 278 14 0 chr10 3179679 3179902 -137136863 + MLT1B LTR MaLR 8 233 -157 264 263 11 63 chr10 3180006 3180101 -137136664 - MER45A DNA AcHobo -50 128 39 819 207 6 11 chr10 3180127 3180301 -137136464 - AluJb SINE Alu 0 312 140 492 336 77 17 chr10 3180311 3180824 -137135941 + L2 LINE L2 2694 3305 -8 436 316 123 0 chr10 3182109 3182139 -137134626 + MIR SINE MIR 6 31 -231 2188 99 17 3 chr10 3182139 3182441 -137134324 + AluSg SINE Alu 1 306 -4 436 316 123 0 chr10 3182441 3182581 -137134184 + MIR SINE MIR 31 197 -65 281 243 9 75 chr10 3182946 3183053 -137133712 - MIR SINE MIR -55 207 108 279 0 0 0 chr10 3183225 3183256 -137133509 + (TG)n Simple_repeat Simple_repeat 1 31 0 189 0 0 0 chr10 3183667 3183688 -137133077 + (T)n Simple_repeat Simple_repeat 1 21 0 1882 133 0 13 chr10 3185409 3185718 -137131047 + AluSx SINE Alu 1 305 -7 1810 120 31 47 chr10 3186826 3187143 -137129622 - AluSx SINE Alu 0 312 1 698 223 171 0 chr10 3187378 3187571 -137129194 + L1PA16 LINE L1 5930 6155 -11 2086 159 48 17 chr10 3187615 3188030 -137128735 + MSTA LTR MaLR 1 428 0 1588 154 41 20 chr10 3188384 3188494 -137128271 + AluJo SINE Alu 1 107 -205 279 0 0 0 chr10 3188494 3188525 -137128240 + (CAA)n Simple_repeat Simple_repeat 3 33 0 1588 154 41 20 chr10 3188525 3188706 -137128059 + AluJo SINE Alu 107 298 -14 595 245 74 25 chr10 3189235 3189398 -137127367 - MIR SINE MIR -21 241 71 431 358 46 30 chr10 3190049 3190421 -137126344 + L1ME3A LINE L1 5558 5935 -235 2139 97 3 7 chr10 3191862 3192160 -137124605 - AluSx SINE Alu -15 297 1 1739 189 63 5 chr10 3192345 3192787 -137123978 + MLT2B1 LTR ERVL 3 520 0 300 219 183 29 chr10 3192894 3193031 -137123734 - L1MDb LINE L1 -4853 1689 1532 335 269 25 52 chr10 3193049 3193151 -137123614 - L1MDb LINE L1 -5089 1533 1430 2240 91 0 3 chr10 3193151 3193448 -137123317 - AluSc SINE Alu -13 296 1 335 269 25 52 chr10 3193448 3193525 -137123240 - L1MDb LINE L1 -5192 1430 1290 1872 184 26 13 chr10 3194167 3194552 -137122213 - MLT1B LTR MaLR 0 390 1 192 40 0 0 chr10 3194650 3194675 -137122090 + (TG)n Simple_repeat Simple_repeat 2 26 0 228 286 26 0 chr10 3195263 3195340 -137121425 + GA-rich Low_complexity Low_complexity 1 79 0 24 0 0 0 chr10 3196560 3196584 -137120181 + AT_rich Low_complexity Low_complexity 1 24 0 226 316 144 22 chr10 3197349 3197488 -137119277 + L2 LINE L2 3115 3270 -2 270 290 0 0 chr10 3197607 3197669 -137119096 - L2 LINE L2 -3 3310 3249 274 325 34 72 chr10 3197684 3197949 -137118816 - L2 LINE L2 -1407 1907 1653 1545 179 7 39 chr10 3198063 3198371 -137118394 - AluJo SINE Alu -14 298 1 296 364 125 32 chr10 3198587 3199180 -137117585 - L2 LINE L2 -2212 1102 455 377 227 68 0 chr10 3199208 3199296 -137117469 + MLT1A2 LTR MaLR 1 94 -280 1418 231 76 32 chr10 3199301 3199707 -137117058 + MER70A LTR ERVL 13 436 -36 417 202 11 11 chr10 3199945 3200034 -137116731 + MLT1A2 LTR MaLR 80 168 -206 2140 98 3 20 chr10 3200034 3200340 -137116425 + AluSx SINE Alu 1 301 -11 372 211 0 0 chr10 3200381 3200452 -137116313 + MLT1A2 LTR MaLR 285 355 -35 855 322 80 19 chr10 3201841 3202214 -137114551 + L2 LINE L2 2918 3313 0 276 284 102 24 chr10 3202267 3202394 -137114371 - MIR SINE MIR -74 188 52 209 221 34 0 chr10 3203504 3203626 -137113139 + CT-rich Low_complexity Low_complexity 1 126 0 226 301 72 0 chr10 3203717 3203800 -137112965 - Charlie1 DNA MER1_type -317 2444 2356 675 231 18 96 chr10 3204110 3204392 -137112373 + L1MD3 LINE L1 7035 7294 -701 243 224 0 79 chr10 3204406 3204482 -137112283 + MLT1F1 LTR MaLR 34 103 -464 608 231 62 0 chr10 3205863 3206023 -137110742 + L1MD3 LINE L1 7739 7908 -87 1190 101 0 0 chr10 3206052 3206220 -137110545 - AluY SINE Alu -9 302 135 251 167 45 15 chr10 3206221 3206287 -137110478 + L1MD3 LINE L1 7928 7995 0 183 269 185 0 chr10 3206452 3206560 -137110205 + MIR SINE MIR 91 218 -44 27 81 0 0 chr10 3207218 3207280 -137109485 + AT_rich Low_complexity Low_complexity 1 62 0 1549 173 13 26 chr10 3207332 3207638 -137109127 - AluJb SINE Alu -8 304 3 1813 125 7 27 chr10 3207949 3208245 -137108520 + AluSx SINE Alu 1 290 -22 4706 132 53 74 chr10 3209325 3210925 -137105840 - pTR5 LTR ERV1 -9 2429 63 268 313 61 30 chr10 3212004 3212135 -137104630 - Charlie8 DNA MER1_type -2274 143 9 2207 162 37 29 chr10 3212139 3212683 -137104082 + MLT2A2 LTR ERVL 1 554 0 1848 192 48 22 chr10 3212983 3213399 -137103366 + MSTC LTR MaLR 2 428 0 385 311 27 0 chr10 3213448 3213596 -137103169 + MER63A DNA MER1_type 51 202 -8 2296 68 7 7 chr10 3213745 3214054 -137102711 + AluSx SINE Alu 1 309 -3 562 203 101 34 chr10 3214107 3214255 -137102510 + MLT1C LTR MaLR 18 175 -292 1549 170 3 42 chr10 3215781 3216092 -137100673 - AluJb SINE Alu -11 301 3 1092 171 89 20 chr10 3216303 3216549 -137100216 + L1MA5 LINE L1 6038 6300 0 3318 236 75 35 chr10 3216552 3216773 -137099992 - L1MD2 LINE L1 -14 6345 6134 234 0 0 0 chr10 3216773 3216799 -137099966 + (TG)n Simple_repeat Simple_repeat 2 27 0 3318 236 75 35 chr10 3216799 3217908 -137098857 - L1MD2 LINE L1 -225 6134 4975 2335 162 2 2 chr10 3218002 3218410 -137098355 - L1MB3 LINE L1 -9 6174 5767 601 194 0 0 chr10 3218415 3218513 -137098252 + L1MB3 LINE L1 5652 5749 -422 1072 295 50 14 chr10 3218527 3218944 -137097821 - L1MD2 LINE L1 -1234 4912 4481 439 286 9 0 chr10 3219057 3219169 -137097596 - MER63A DNA MER1_type 0 210 98 423 175 35 9 chr10 3219232 3219346 -137097419 + CT-rich Low_complexity Low_complexity 1 117 0 1039 222 63 11 chr10 3219466 3219750 -137097015 + L1MA4 LINE L1 5999 6297 -3 203 387 50 0 chr10 3220880 3220999 -137095766 + L3b LINE CR1 1232 1356 -227 266 286 0 14 chr10 3221204 3221274 -137095491 + L3 LINE CR1 1504 1572 -5 1209 70 41 0 chr10 3222830 3223002 -137093763 - AluY SINE Alu 0 311 133 304 316 15 52 chr10 3223483 3223619 -137093146 - MIR SINE MIR -14 248 118 2962 187 25 33 chr10 3223625 3224268 -137092497 - LTR48B LTR ERV1 -3 641 4 1999 143 0 0 chr10 3224591 3224891 -137091874 - AluSx SINE Alu -12 300 1 208 283 0 33 chr10 3225538 3225598 -137091167 + CT-rich Low_complexity Low_complexity 3 60 0 240 295 85 16 chr10 3226903 3227032 -137089733 + MER45A DNA AcHobo 40 177 -1 190 370 54 0 chr10 3227238 3227330 -137089435 - MIR SINE MIR -123 139 43 1256 171 40 5 chr10 3227841 3228063 -137088702 + MER30 DNA MER1_type 1 230 0 1869 102 0 11 chr10 3228634 3228898 -137087867 - AluSq SINE Alu -52 261 1 349 233 33 0 chr10 3229361 3229451 -137087314 - MER103 DNA DNA -8 158 66 715 274 33 12 chr10 3229455 3229700 -137087065 - Charlie5 DNA MER1_type -28 2584 2335 245 192 0 3 chr10 3229714 3229807 -137086958 - AluY SINE Alu -177 125 1 1418 203 24 100 chr10 3231843 3232262 -137084503 + L1MB3 LINE L1 5364 5750 -421 1085 183 10 0 chr10 3232264 3232472 -137084293 + L1MB3 LINE L1 5973 6182 -1 191 283 50 17 chr10 3232637 3232697 -137084068 - L3 LINE CR1 -478 1099 1038 313 333 7 35 chr10 3232972 3233113 -137083652 - MIR3 SINE MIR -32 176 40 306 0 0 0 chr10 3233647 3233681 -137083084 + (CA)n Simple_repeat Simple_repeat 1 34 0 1349 215 20 27 chr10 3233859 3234157 -137082608 + AluJo SINE Alu 1 296 -6 36 40 0 0 chr10 3234182 3234232 -137082533 + AT_rich Low_complexity Low_complexity 1 50 0 2466 43 3 0 chr10 3234304 3234606 -137082159 + AluY SINE Alu 1 303 -8 1638 204 95 16 chr10 3235297 3235728 -137081037 + MER31B LTR ERV1 2 466 0 258 313 67 33 chr10 3235865 3236015 -137080750 - L2 LINE L2 -923 2391 2237 1799 239 25 15 chr10 3236129 3236601 -137080164 - MER90 LTR ERV1 -68 546 70 2186 115 13 10 chr10 3236768 3237072 -137079693 + AluSq SINE Alu 1 305 -8 21 0 0 0 chr10 3239812 3239833 -137076932 + AT_rich Low_complexity Low_complexity 1 21 0 2042 125 10 7 chr10 3240307 3240602 -137076163 + AluSx SINE Alu 1 296 -16 184 219 0 0 chr10 3240684 3240725 -137076040 - MIR3 SINE MIR -26 182 142 206 255 0 0 chr10 3241946 3241997 -137074768 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 247 292 26 62 chr10 3242531 3242644 -137074121 + MIR SINE MIR 33 141 -67 341 203 123 88 chr10 3242832 3242890 -137073875 - ORSL DNA AcHobo -28 247 193 1859 129 0 0 chr10 3242890 3243153 -137073612 - AluSg SINE Alu -5 305 43 341 203 123 88 chr10 3243153 3243321 -137073444 - ORSL DNA AcHobo -82 193 13 188 283 0 0 chr10 3243360 3243420 -137073345 - L2 LINE L2 -58 3255 3196 3852 194 27 17 chr10 3244096 3244920 -137071845 - L1MB3 LINE L1 -1 6182 5351 2779 97 5 0 chr10 3245015 3245388 -137071377 + THE1C LTR MaLR 1 375 0 223 290 65 32 chr10 3245589 3245682 -137071083 - MIR3 SINE MIR -110 98 3 426 195 18 9 chr10 3246881 3246994 -137069771 + CT-rich Low_complexity Low_complexity 1 114 0 207 100 0 0 chr10 3247013 3247043 -137069722 + (TTCC)n Simple_repeat Simple_repeat 4 33 0 210 369 9 27 chr10 3247643 3247754 -137069011 - MIR3 SINE MIR -93 115 7 2051 136 147 8 chr10 3248341 3248715 -137068050 - MSTA LTR MaLR -2 426 1 1309 214 79 25 chr10 3248989 3249345 -137067420 + MER74A LTR ERVL 151 525 -33 252 0 0 0 chr10 3249596 3249624 -137067141 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 1789 159 3 29 chr10 3249820 3250129 -137066636 - AluJo SINE Alu -11 301 1 2637 106 0 8 chr10 3251377 3251744 -137065021 + THE1B LTR MaLR 1 364 0 3068 171 147 71 chr10 3251746 3252520 -137064245 + THE1B-int LTR MaLR 3 835 -816 1026 116 0 14 chr10 3252520 3252666 -137064099 + THE1B LTR MaLR 221 364 0 1572 205 61 23 chr10 3254075 3254504 -137062261 - Charlie1b DNA MER1_type 0 523 79 2314 99 0 3 chr10 3254765 3255059 -137061706 - AluSq SINE Alu -20 293 1 55 65 0 43 chr10 3257645 3257830 -137058935 + AT_rich Low_complexity Low_complexity 1 177 0 22 0 0 0 chr10 3257869 3257891 -137058874 + AT_rich Low_complexity Low_complexity 1 22 0 1992 124 7 3 chr10 3257989 3258308 -137058457 - AluSx SINE Alu 0 320 1 384 244 23 74 chr10 3259186 3259362 -137057403 + MER5A DNA MER1_type 14 180 -9 539 190 84 39 chr10 3259545 3259724 -137057041 - MER5A DNA MER1_type -2 187 1 2310 112 0 6 chr10 3260152 3260466 -137056299 + AluSq SINE Alu 1 312 -1 21 0 0 0 chr10 3260797 3260818 -137055947 + AT_rich Low_complexity Low_complexity 1 21 0 1327 145 30 98 chr10 3260964 3261301 -137055464 - L1MB8 LINE L1 -4 6174 5861 1276 225 39 0 chr10 3261303 3261610 -137055155 - L1MC3 LINE L1 0 7785 7467 1199 174 9 0 chr10 3261622 3261841 -137054924 - L1MA8 LINE L1 -1 6290 6070 2108 195 49 117 chr10 3261981 3262319 -137054446 - LTR8A LTR ERV1 0 727 464 3241 77 9 2 chr10 3262319 3262747 -137054018 + L1PA7 LINE L1 5722 6152 -2 2108 195 49 117 chr10 3262747 3263146 -137053619 - LTR8A LTR ERV1 -263 464 40 247 289 96 7 chr10 3264304 3264439 -137052326 + MIR3 SINE MIR 44 190 -18 323 183 12 0 chr10 3266307 3266389 -137050376 + CT-rich Low_complexity Low_complexity 2 84 0 299 221 206 29 chr10 3266831 3266967 -137049798 + Ricksha DNA DNA 136 295 -959 * 844 175 0 7 chr10 3266957 3267111 -137049654 + Ricksha DNA DNA 1692 1844 -1402 2915 218 30 21 chr10 3267159 3267819 -137048946 + Ricksha DNA DNA 1819 2484 -762 * 3401 209 56 27 chr10 3267802 3268694 -137048071 + Ricksha DNA DNA 2318 3235 -11 293 109 18 0 chr10 3268750 3268805 -137047960 + (CA)n Simple_repeat Simple_repeat 1 56 0 263 226 75 21 chr10 3268860 3268953 -137047812 + MER45A DNA AcHobo 80 177 -1 261 0 0 0 chr10 3271048 3271077 -137045688 + (T)n Simple_repeat Simple_repeat 1 29 0 2024 128 3 13 chr10 3271636 3271942 -137044823 + AluSx SINE Alu 1 303 -9 1576 192 78 19 chr10 3272257 3272627 -137044138 + MSTD LTR MaLR 1 392 -4 516 156 0 0 chr10 3272673 3272763 -137044002 + GA-rich Low_complexity Low_complexity 3 92 0 583 170 6 33 chr10 3272894 3273076 -137043689 + GA-rich Low_complexity Low_complexity 2 178 0 2280 209 20 8 chr10 3273433 3273927 -137042838 + L1MB8 LINE L1 5505 6004 -174 315 267 72 44 chr10 3273936 3274116 -137042649 - LTR16B LTR ERVL -160 304 120 445 145 0 0 chr10 3274683 3274752 -137042013 - L1PB1 LINE L1 -249 5902 5834 1556 120 8 4 chr10 3274752 3274987 -137041778 + L1PB1 LINE L1 5908 6149 -2 385 223 36 36 chr10 3275423 3275535 -137041230 - MER69 DNA AcHobo -2414 112 1 3279 233 33 20 chr10 3275994 3276119 -137040646 + L1ME1 LINE L1 5158 5280 -886 180 77 0 0 chr10 3276119 3276145 -137040620 + (CA)n Simple_repeat Simple_repeat 2 27 0 3279 233 33 20 chr10 3276145 3276959 -137039806 + L1ME1 LINE L1 5280 6110 -56 2163 114 3 22 chr10 3278211 3278526 -137038239 + AluSg SINE Alu 1 309 -1 615 247 57 98 chr10 3278636 3279179 -137037586 + L1MC5 LINE L1 7391 7911 -50 265 383 8 8 chr10 3279280 3279408 -137037357 + MIR SINE MIR 19 146 -116 1209 238 57 25 chr10 3279832 3280185 -137036580 - MLT1A1 LTR MaLR 0 365 2 342 61 0 0 chr10 3280404 3280453 -137036312 + (CA)n Simple_repeat Simple_repeat 2 50 0 284 369 17 0 chr10 3282073 3282199 -137034566 + MIR SINE MIR 37 162 -65 621 72 0 0 chr10 3282230 3282313 -137034452 + (GGAA)n Simple_repeat Simple_repeat 2 84 0 320 182 55 9 chr10 3282324 3282434 -137034331 + GA-rich Low_complexity Low_complexity 3 117 0 276 30 0 0 chr10 3284235 3284268 -137032497 + (CA)n Simple_repeat Simple_repeat 2 34 0 2883 146 8 22 chr10 3284525 3285024 -137031741 + L1MA8 LINE L1 5629 6120 -171 995 261 35 17 chr10 3285375 3285662 -137031103 - MLT1E LTR MaLR 0 593 302 246 371 59 6 chr10 3287029 3287199 -137029566 - MIR SINE MIR -57 205 27 457 271 66 7 chr10 3287596 3287747 -137029018 + MLT1A2 LTR MaLR 1 160 -214 273 200 93 7 chr10 3287890 3288033 -137028732 + MLT1B LTR MaLR 16 179 -211 500 186 9 0 chr10 3288055 3288168 -137028597 + CT-rich Low_complexity Low_complexity 2 115 0 * 713 245 7 4 chr10 3288152 3288349 -137028416 + MLT1B LTR MaLR 173 383 -7 475 292 15 8 chr10 3288397 3288527 -137028238 + L2 LINE L2 3136 3266 -6 255 319 26 35 chr10 3288585 3288698 -137028067 - MIR SINE MIR -62 146 35 1967 110 37 0 chr10 3289551 3289854 -137026911 - AluSx SINE Alu 0 313 1 305 281 31 0 chr10 3290027 3290123 -137026642 - MER5A DNA MER1_type -6 183 85 219 204 0 0 chr10 3290378 3290427 -137026338 + (TG)n Simple_repeat Simple_repeat 1 49 0 645 196 0 33 chr10 3290438 3290622 -137026143 + (TG)n Simple_repeat Simple_repeat 2 179 0 2177 100 4 0 chr10 3291693 3291974 -137024791 + AluSq SINE Alu 1 282 -31 210 71 0 0 chr10 3291979 3292007 -137024758 + (GGGGA)n Simple_repeat Simple_repeat 5 32 0 1498 191 32 45 chr10 3292547 3292925 -137023840 - MER93b LTR ERV1 0 373 1 1201 210 34 92 chr10 3294963 3295174 -137021591 - MER57A LTR ERV1 -1 402 225 2280 115 0 0 chr10 3295174 3295478 -137021287 - AluSx SINE Alu -8 304 1 1201 210 34 92 chr10 3295478 3295680 -137021085 - MER57A LTR ERV1 -178 225 13 26 0 0 0 chr10 3296089 3296115 -137020650 + AT_rich Low_complexity Low_complexity 1 26 0 300 287 128 14 chr10 3296183 3296370 -137020395 - MIR SINE MIR -46 216 17 241 233 0 58 chr10 3296913 3296999 -137019766 + LTR29 LTR ERV1 1 81 -541 * 1330 222 91 29 chr10 3296990 3297409 -137019356 + MER39 LTR ERV1 260 704 -3 265 339 64 35 chr10 3297428 3297599 -137019166 - MIR SINE MIR -31 231 56 228 67 0 0 chr10 3299589 3299619 -137017146 + (GGA)n Simple_repeat Simple_repeat 1 30 0 181 324 70 0 chr10 3300413 3300484 -137016281 + MIR SINE MIR 61 136 -126 266 280 13 0 chr10 3300513 3300588 -137016177 + (CA)n Simple_repeat Simple_repeat 1 76 0 1230 194 36 12 chr10 3301003 3301156 -137015609 + MLT1A1 LTR MaLR 1 165 -200 2346 85 0 0 chr10 3301156 3301457 -137015308 + AluY SINE Alu 1 301 0 1230 194 36 12 chr10 3301457 3301554 -137015211 + MLT1A1 LTR MaLR 165 258 -107 744 134 0 0 chr10 3301689 3301801 -137014964 + MLT1A1 LTR MaLR 254 365 0 275 315 91 17 chr10 3303660 3303901 -137012864 + LTR16B LTR ERVL 194 452 -12 1948 164 0 3 chr10 3303969 3304273 -137012492 + AluJo SINE Alu 1 303 -9 2086 104 11 0 chr10 3304412 3304733 -137012032 + AluSp SINE Alu 1 313 0 1460 233 29 11 chr10 3304891 3305273 -137011492 + MLT1B LTR MaLR 1 389 -1 1091 246 81 0 chr10 3306219 3306552 -137010213 - MLT1B LTR MaLR -24 366 7 306 322 35 53 chr10 3308777 3308948 -137007817 - MIR SINE MIR -70 192 25 264 112 73 47 chr10 3310466 3310702 -137006063 + (TCTA)n Simple_repeat Simple_repeat 1 242 0 207 298 0 0 chr10 3310955 3311012 -137005753 - MIR SINE MIR -186 76 20 317 280 28 9 chr10 3311228 3311335 -137005430 + MER5A DNA MER1_type 1 109 -80 270 81 0 0 chr10 3311474 3311511 -137005254 + (A)n Simple_repeat Simple_repeat 1 37 0 27 73 0 0 chr10 3312405 3312460 -137004305 + AT_rich Low_complexity Low_complexity 1 55 0 2301 94 10 0 chr10 3312969 3313268 -137003497 - AluSg SINE Alu -8 302 1 21 0 0 0 chr10 3315713 3315734 -137001031 + AT_rich Low_complexity Low_complexity 1 21 0 246 271 0 17 chr10 3315910 3315969 -137000796 - MIR SINE MIR -88 174 117 1793 167 7 66 chr10 3317948 3318356 -136998409 + MLT1B LTR MaLR 1 384 -6 2309 108 7 7 chr10 3318597 3318902 -136997863 - AluSx SINE Alu -7 305 1 280 292 42 0 chr10 3318913 3319009 -136997756 + LTR67 LTR ERVL 458 557 0 2643 147 36 74 chr10 3319155 3319537 -136997228 + LTR26B LTR ERV1 1 359 -172 2027 123 14 0 chr10 3319537 3319840 -136996925 + AluSx SINE Alu 1 307 0 2643 147 36 74 chr10 3319840 3320006 -136996759 + LTR26B LTR ERV1 359 530 -1 332 316 83 26 chr10 3320902 3321095 -136995670 + MIR SINE MIR 24 227 -35 182 306 69 14 chr10 3321757 3321829 -136994936 + L2 LINE L2 3142 3217 -55 270 0 0 0 chr10 3323133 3323163 -136993602 + (TC)n Simple_repeat Simple_repeat 1 30 0 207 0 0 0 chr10 3323162 3323185 -136993580 + (CA)n Simple_repeat Simple_repeat 1 23 0 * 234 300 0 25 chr10 3323223 3323303 -136993462 + MIR SINE MIR 166 243 -19 267 103 0 0 chr10 3323311 3323350 -136993415 + (TG)n Simple_repeat Simple_repeat 2 40 0 2047 119 20 0 chr10 3323719 3324012 -136992753 - AluSx SINE Alu -13 299 1 1914 94 11 34 chr10 3324705 3324970 -136991795 - AluSg SINE Alu -16 294 36 2803 208 45 46 chr10 3325510 3326355 -136990410 + L1MB8 LINE L1 5335 6178 0 573 42 0 0 chr10 3327411 3327483 -136989282 + (TC)n Simple_repeat Simple_repeat 1 72 0 1960 179 40 71 chr10 3328224 3328537 -136988228 - MLT1D LTR MaLR -3 502 209 2231 42 4 11 chr10 3328537 3328821 -136987944 - AluY SINE Alu 0 300 19 1960 179 40 71 chr10 3328821 3329024 -136987741 - MLT1D LTR MaLR -296 209 1 237 268 123 58 chr10 3329145 3329303 -136987462 + L1ME LINE L1 5617 5763 -358 1738 240 87 23 chr10 3329303 3329832 -136986933 - MLT1F1 LTR MaLR 0 567 5 237 268 123 58 chr10 3329832 3329949 -136986816 + L1ME LINE L1 5763 5910 -211 729 266 22 3 chr10 3330152 3330338 -136986427 + MIR SINE MIR 1 190 -18 314 352 72 0 chr10 3330312 3330437 -136986328 - MER5B DNA MER1_type -44 134 1 * 2732 36 0 0 chr10 3330688 3330991 -136985774 + AluYa5 SINE Alu 1 303 -8 366 180 0 90 chr10 3331524 3331613 -136985152 - MIR3 SINE MIR -2 206 126 1291 203 34 69 chr10 3331986 3332306 -136984459 - AluSx SINE Alu -3 309 1 4061 192 23 9 chr10 3332314 3333189 -136983576 - L1MC3 LINE L1 -3 7782 5444 4160 107 0 88 chr10 3333758 3334486 -136982279 - MER4A LTR ERV1 0 664 1 249 277 130 48 chr10 3334784 3334986 -136981779 - MIR SINE MIR -11 251 17 29 0 0 0 chr10 3334986 3335015 -136981750 + AT_rich Low_complexity Low_complexity 1 29 0 280 247 88 71 chr10 3336466 3336636 -136980129 - MER34 LTR ERV1 -2 540 450 465 207 41 130 chr10 3336757 3337003 -136979762 - MER34C LTR ERV1 -321 264 41 2586 80 0 3 chr10 3337092 3337403 -136979362 + AluSx SINE Alu 3 312 0 298 288 120 33 chr10 3338013 3338197 -136978568 - MIR SINE MIR 0 262 63 25 0 0 0 chr10 3338214 3338239 -136978526 + AT_rich Low_complexity Low_complexity 1 25 0 7589 198 15 21 chr10 3338254 3340802 -136975963 - L1MA10 LINE L1 0 6334 3800 230 203 0 17 chr10 3340870 3340929 -136975836 + CT-rich Low_complexity Low_complexity 3 60 0 218 105 26 0 chr10 3343032 3343070 -136973695 + (TTA)n Simple_repeat Simple_repeat 1 39 0 333 308 56 43 chr10 3343653 3343975 -136972790 + MER46C DNA MER2_type 11 336 -2 2281 116 6 0 chr10 3344217 3344528 -136972237 + AluSq SINE Alu 1 313 0 2134 104 27 0 chr10 3344692 3344989 -136971776 - AluSx SINE Alu -2 310 6 21 0 0 0 chr10 3345436 3345457 -136971308 + AT_rich Low_complexity Low_complexity 1 21 0 384 191 0 0 chr10 3346280 3346364 -136970401 + (CA)n Simple_repeat Simple_repeat 1 84 0 208 339 0 33 chr10 3347433 3347613 -136969152 + (CACG)n Simple_repeat Simple_repeat 4 177 0 275 317 0 33 chr10 3347848 3348028 -136968737 + (CACG)n Simple_repeat Simple_repeat 4 177 0 252 176 0 157 chr10 3349454 3349556 -136967209 + LTR46-int LTR ERV1 525 610 -6375 2325 89 0 10 chr10 3349940 3350242 -136966523 + AluY SINE Alu 2 300 -11 1648 173 0 31 chr10 3350243 3350532 -136966233 + AluSx SINE Alu 17 296 -16 803 131 31 8 chr10 3350683 3350813 -136965952 - FLAM_C SINE Alu 0 133 1 1371 283 74 20 chr10 3352459 3352947 -136963818 - LTR40a LTR ERVL 0 519 6 407 300 29 14 chr10 3353585 3353725 -136963040 + MLT1J1 LTR MaLR 64 205 -241 1376 215 101 46 chr10 3354182 3354620 -136962145 - MER31B LTR ERV1 0 466 5 466 216 166 14 chr10 3354935 3355074 -136961691 - MER58B DNA MER1_type -1 340 181 949 240 103 39 chr10 3355124 3355512 -136961253 + LTR37A LTR ERV1 13 425 -1 2381 80 0 46 chr10 3356958 3357284 -136959481 - AluY SINE Alu 0 311 1 270 268 32 16 chr10 3357422 3357545 -136959220 + (TA)n Simple_repeat Simple_repeat 1 125 0 988 75 14 7 chr10 3359568 3359715 -136957050 + (TTTC)n Simple_repeat Simple_repeat 2 149 0 865 215 178 24 chr10 3360588 3360805 -136955960 + MER2 DNA MER2_type 1 278 -66 2082 141 0 0 chr10 3360805 3361103 -136955662 - AluSx SINE Alu -14 298 1 865 215 178 24 chr10 3361103 3361183 -136955582 + MER2 DNA MER2_type 278 344 0 422 207 58 0 chr10 3361498 3361585 -136955180 - MER2 DNA MER2_type -200 145 54 837 38 0 0 chr10 3361589 3361694 -136955071 + (GA)n Simple_repeat Simple_repeat 1 105 0 2171 113 24 0 chr10 3361820 3362113 -136954652 + AluSq SINE Alu 1 300 -13 225 317 52 57 chr10 3364506 3364736 -136952029 - L1MCc LINE L1 -6176 247 19 1875 154 34 0 chr10 3364795 3364917 -136951848 + AluSx SINE Alu 1 117 -195 240 35 0 0 chr10 3364917 3364946 -136951819 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 1875 154 34 0 chr10 3364946 3365116 -136951649 + AluSx SINE Alu 117 303 -9 23 0 0 0 chr10 3365122 3365145 -136951620 + AT_rich Low_complexity Low_complexity 1 23 0 535 168 35 0 chr10 3366406 3366519 -136950246 - MER96B DNA MER1_type? -50 367 251 434 324 50 16 chr10 3366739 3366921 -136949844 + MIR SINE MIR 75 262 0 207 214 0 0 chr10 3366921 3366963 -136949802 + (TTG)n Simple_repeat Simple_repeat 2 43 0 180 252 29 68 chr10 3367831 3367934 -136948831 - L2 LINE L2 -250 3022 2924 212 364 8 8 chr10 3368645 3368763 -136948002 - L2 LINE L2 -1 3312 3195 493 226 36 67 chr10 3369562 3369757 -136947008 + LTR33 LTR ERVL 19 207 -314 257 295 60 34 chr10 3369890 3370039 -136946726 + LTR33 LTR ERVL 367 519 -2 275 264 130 0 chr10 3371119 3371221 -136945544 + MIR SINE MIR 45 157 -62 644 230 11 59 chr10 3371652 3371839 -136944926 + MER5B DNA MER1_type 1 178 0 182 289 121 12 chr10 3372208 3372291 -136944474 + L2 LINE L2 3184 3275 -38 1870 183 21 18 chr10 3372302 3372691 -136944074 - MLT1B LTR MaLR 0 390 1 1649 156 7 40 chr10 3373832 3374133 -136942632 + AluJb SINE Alu 1 291 -21 404 293 0 43 chr10 3374151 3374339 -136942426 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 446 297 11 34 chr10 3374367 3374542 -136942223 + (TATG)n Simple_repeat Simple_repeat 1 171 0 264 77 0 0 chr10 3377081 3377120 -136939645 + (CA)n Simple_repeat Simple_repeat 1 39 0 266 25 0 50 chr10 3377136 3377176 -136939589 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 1557 205 15 36 chr10 3377843 3378179 -136938586 + MLT1A1 LTR MaLR 4 332 -33 303 290 153 0 chr10 3378469 3378593 -136938172 - MIR SINE MIR -14 248 106 2245 153 33 2 chr10 3379162 3379555 -136937210 - L1M2 LINE L1 -558 5742 5338 3378 141 36 10 chr10 3379555 3379990 -136936775 + L1MA4 LINE L1 5698 6154 -146 2334 116 36 30 chr10 3379990 3380352 -136936413 + THE1B LTR MaLR 1 364 0 3378 141 36 10 chr10 3380352 3380495 -136936270 + L1MA4 LINE L1 6154 6292 -8 731 169 15 0 chr10 3380521 3380657 -136936108 + L1MA4 LINE L1 6163 6300 0 2269 152 93 0 chr10 3381235 3381644 -136935121 + LTR47A LTR ERVL 6 452 0 266 339 0 8 chr10 3381785 3381912 -136934853 + MIR SINE MIR 96 221 -41 2154 158 26 16 chr10 3382360 3382746 -136934019 + L1PA15 LINE L1 5774 6163 -2 247 130 0 0 chr10 3382841 3382887 -136933878 + L1MC4 LINE L1 6658 6703 -1339 207 225 0 0 chr10 3382888 3382928 -136933837 + (TA)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr10 3383148 3383169 -136933596 + AT_rich Low_complexity Low_complexity 1 21 0 270 343 30 35 chr10 3383194 3383395 -136933370 + MIR SINE MIR 15 214 -48 2052 123 3 3 chr10 3385869 3386161 -136930604 - AluSx SINE Alu -20 292 1 22 0 0 0 chr10 3386711 3386733 -136930032 + AT_rich Low_complexity Low_complexity 1 22 0 368 265 0 0 chr10 3387631 3387714 -136929051 - MLT1D LTR MaLR -389 116 34 2827 274 78 55 chr10 3387714 3390277 -136926488 + L1ME3A LINE L1 3346 5990 -180 1676 143 20 61 chr10 3390277 3390602 -136926163 - AluJb SINE Alu 0 313 1 2827 274 78 55 chr10 3390602 3390742 -136926023 + L1ME3A LINE L1 5990 6125 -45 25 0 0 0 chr10 3390871 3390896 -136925869 + AT_rich Low_complexity Low_complexity 1 25 0 2176 119 17 0 chr10 3392038 3392340 -136924425 + AluSq SINE Alu 1 307 -6 28 29 0 0 chr10 3393036 3393071 -136923694 + AT_rich Low_complexity Low_complexity 1 35 0 289 310 150 0 chr10 3394737 3394850 -136921915 + MIR SINE MIR 63 192 -70 2317 90 3 26 chr10 3395248 3395560 -136921205 + AluSp SINE Alu 1 305 -8 403 322 99 7 chr10 3395679 3395831 -136920934 + MIR3 SINE MIR 37 202 -6 2127 107 0 0 chr10 3396090 3396393 -136920372 + AluSx SINE Alu 12 314 0 2299 122 0 0 chr10 3396545 3396849 -136919916 + AluSx SINE Alu 1 304 -8 282 262 192 77 chr10 3397627 3397913 -136918852 - MLT1E1 LTR MaLR -23 631 313 4214 76 53 32 chr10 3398352 3398642 -136918123 + L1PB1 LINE L1 5522 5804 -347 369 0 0 0 chr10 3398642 3398683 -136918082 + (CA)n Simple_repeat Simple_repeat 1 41 0 4214 76 53 32 chr10 3398683 3399009 -136917756 + L1PB1 LINE L1 5804 6151 0 1835 237 59 13 chr10 3399043 3399498 -136917267 + MLT1D LTR MaLR 13 488 -17 3462 218 36 139 chr10 3399518 3401044 -136915721 + MLT1D-int LTR MaLR 3 1371 0 1025 228 25 22 chr10 3401044 3401320 -136915445 + MLT1D LTR MaLR 1 277 -228 1394 171 74 119 chr10 3401327 3401954 -136914811 + LTR49 LTR ERV1 5 565 0 1013 228 50 0 chr10 3401954 3402173 -136914592 + MLT1D LTR MaLR 276 505 0 2400 68 0 42 chr10 3403440 3403747 -136913018 - AluY SINE Alu -13 298 5 435 267 0 0 chr10 3404159 3404264 -136912501 + MIR SINE MIR 97 201 -61 2213 117 39 28 chr10 3404433 3404793 -136911972 + THE1B LTR MaLR 1 364 0 2392 59 28 0 chr10 3406354 3406643 -136910122 - AluY SINE Alu -14 297 1 2311 119 14 6 chr10 3408384 3408736 -136908029 + THE1A LTR MaLR 1 355 0 2154 124 10 3 chr10 3410605 3410911 -136905854 - AluSq SINE Alu -5 308 1 621 306 198 14 chr10 3413471 3413975 -136902790 - L2 LINE L2 -599 2715 2119 22 0 0 0 chr10 3414793 3414815 -136901950 + AT_rich Low_complexity Low_complexity 1 22 0 1947 138 0 43 chr10 3414870 3415175 -136901590 + AluSx SINE Alu 1 292 -20 5643 129 19 2 chr10 3415411 3416623 -136900142 + L1PB3 LINE L1 4926 6154 0 21 71 0 0 chr10 3418363 3418405 -136898360 + AT_rich Low_complexity Low_complexity 1 42 0 2402 82 0 0 chr10 3419395 3419689 -136897076 - AluSg SINE Alu -16 294 1 441 297 30 25 chr10 3421840 3422076 -136894689 - L3 LINE CR1 -190 1387 1151 288 346 26 19 chr10 3422544 3422700 -136894065 + (TATATG)n Simple_repeat Simple_repeat 1 157 0 * 426 354 17 0 chr10 3422637 3422812 -136893953 + (TG)n Simple_repeat Simple_repeat 1 178 0 309 117 81 18 chr10 3423243 3423354 -136893411 + (CTATA)n Simple_repeat Simple_repeat 3 120 0 189 94 0 0 chr10 3424820 3424852 -136891913 + (CCCTAA)n Simple_repeat Simple_repeat 2 33 0 22 0 0 0 chr10 3425799 3425821 -136890944 + AT_rich Low_complexity Low_complexity 1 22 0 419 273 169 7 chr10 3427419 3427573 -136889192 - MIR SINE MIR -45 217 39 331 228 126 36 chr10 3428726 3428893 -136887872 - MIR SINE MIR -17 245 64 213 39 0 0 chr10 3428927 3428953 -136887812 + (CAG)n Simple_repeat Simple_repeat 3 28 0 1030 260 101 9 chr10 3430885 3431231 -136885534 - MLT1B LTR MaLR -12 378 1 399 339 60 50 chr10 3431816 3432167 -136884598 - L1ME4a LINE L1 -269 5852 5493 347 56 19 0 chr10 3432167 3432221 -136884544 + (CA)n Simple_repeat Simple_repeat 2 56 0 399 339 60 50 chr10 3432221 3432353 -136884412 - L1ME4a LINE L1 -628 5493 5364 323 273 53 33 chr10 3432769 3432919 -136883846 - L1ME4a LINE L1 -1111 5035 4883 2066 148 48 31 chr10 3433442 3433800 -136882965 + THE1B LTR MaLR 1 364 0 276 233 17 0 chr10 3434005 3434065 -136882700 + MLT1A1 LTR MaLR 2 62 -366 620 263 80 77 chr10 3434100 3434374 -136882391 + MLT1A1 LTR MaLR 80 354 -11 2257 159 36 31 chr10 3435598 3436146 -136880619 - MLT2A2 LTR ERVL 0 554 1 333 47 0 0 chr10 3436674 3436717 -136880048 + (TTA)n Simple_repeat Simple_repeat 3 45 0 7244 51 1 1 chr10 3436718 3438264 -136878501 - L1PA5 LINE L1 -16 6138 4597 1649 136 19 0 chr10 3440423 3440688 -136876077 - L1MA8 LINE L1 -28 6263 5994 847 99 8 0 chr10 3440938 3441059 -136875706 - AluSg/x SINE Alu -13 297 176 278 237 45 128 chr10 3441082 3441238 -136875527 + MIR SINE MIR 47 189 -73 2059 53 32 0 chr10 3441719 3441966 -136874799 + L1PA7 LINE L1 5900 6154 0 23 0 0 0 chr10 3442250 3442273 -136874492 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr10 3444197 3444225 -136872540 + AT_rich Low_complexity Low_complexity 1 28 0 333 0 0 0 chr10 3444771 3444808 -136871957 + (TTA)n Simple_repeat Simple_repeat 3 39 0 1608 50 0 0 chr10 3444808 3444989 -136871776 - L1PA3 LINE L1 -18 6137 5957 871 177 0 0 chr10 3445506 3445647 -136871118 - AluJb SINE Alu -32 280 140 664 247 67 109 chr10 3445749 3445765 -136871000 - L1MC5 LINE L1 -87 7874 7859 2352 67 3 0 chr10 3445765 3446048 -136870717 - AluSp SINE Alu -29 284 1 664 247 67 109 chr10 3446048 3446597 -136870168 - L1MC5 LINE L1 -102 7859 7333 472 198 108 0 chr10 3446601 3446712 -136870053 + Charlie5 DNA MER1_type 2 124 -2488 1348 197 72 40 chr10 3446712 3447088 -136869677 + Charlie5 DNA MER1_type 2236 2623 0 245 118 0 0 chr10 3447687 3447721 -136869044 + HSMAR1 DNA Mariner 1 34 -1253 789 272 48 97 chr10 3447739 3448306 -136868459 - L1MC5 LINE L1 -812 7149 6611 29 47 0 0 chr10 3448345 3448388 -136868377 + AT_rich Low_complexity Low_complexity 1 43 0 2361 100 0 3 chr10 3448676 3448986 -136867779 - AluSg SINE Alu -1 309 1 225 204 19 48 chr10 3450813 3450916 -136865849 + (TTATA)n Simple_repeat Simple_repeat 4 103 0 4698 36 0 0 chr10 3451504 3452028 -136864737 + L1PA5 LINE L1 5629 6152 -2 398 248 57 0 chr10 3452493 3452634 -136864131 - MER103 DNA DNA -14 152 4 2025 145 0 7 chr10 3452660 3452964 -136863801 - AluSx SINE Alu -10 302 1 265 331 0 8 chr10 3453226 3453353 -136863412 + (TA)n Simple_repeat Simple_repeat 1 126 0 412 270 25 17 chr10 3453568 3453752 -136863013 + L1ME LINE L1 5478 5575 -546 1845 162 3 19 chr10 3453801 3454116 -136862649 - AluSx SINE Alu -2 310 1 265 296 56 38 chr10 3454697 3454896 -136861869 + L1ME LINE L1 5686 5825 -296 200 332 179 11 chr10 3455277 3455467 -136861298 + MIR SINE MIR 27 248 -14 282 29 0 0 chr10 3455620 3455655 -136861110 + (TG)n Simple_repeat Simple_repeat 2 36 0 323 264 90 42 chr10 3455667 3455811 -136860954 - MLT2B2 LTR ERVL -81 434 284 * 614 203 50 51 chr10 3455786 3455988 -136860777 - MLT2B1 LTR ERVL -255 209 1 26 64 0 0 chr10 3456051 3456098 -136860667 + AT_rich Low_complexity Low_complexity 1 47 0 3458 149 10 0 chr10 3456113 3456622 -136860143 + MER75 DNA T2_type 1 514 0 496 251 175 54 chr10 3456723 3457077 -136859688 + MLT1H LTR MaLR 117 513 -36 1663 172 31 0 chr10 3457290 3457581 -136859184 - AluJb SINE Alu -6 306 7 563 273 20 0 chr10 3459358 3459508 -136857257 + MER58B DNA MER1_type 185 337 -4 581 123 123 0 chr10 3460248 3460362 -136856403 + L1MA4 LINE L1 6169 6296 -4 306 319 8 0 chr10 3460528 3460647 -136856118 - MER45A DNA AcHobo 0 178 59 549 264 17 17 chr10 3462215 3462393 -136854372 - MER45A DNA AcHobo 0 178 1 210 308 125 42 chr10 3464695 3464815 -136851950 - MIR SINE MIR -116 146 17 260 276 257 0 chr10 3466492 3466597 -136850168 - L2 LINE L2 -4 3268 3137 2299 99 7 0 chr10 3468559 3468861 -136847904 + AluSq SINE Alu 1 304 -9 183 80 0 0 chr10 3469650 3469675 -136847090 + (GA)n Simple_repeat Simple_repeat 1 25 0 605 101 39 51 chr10 3469677 3469855 -136846910 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 501 117 62 41 chr10 3469889 3470234 -136846531 + (TAGA)n Simple_repeat Simple_repeat 1 352 0 665 90 34 34 chr10 3470293 3470470 -136846295 + (TAGA)n Simple_repeat Simple_repeat 3 179 0 389 230 11 0 chr10 3471599 3471686 -136845079 + MER33 DNA MER1_type 1 88 -236 671 133 97 67 chr10 3471826 3472021 -136844744 + MER33 DNA MER1_type 90 290 -34 234 347 60 7 chr10 3473852 3474002 -136842763 - MARNA DNA Mariner -27 559 402 21 0 0 0 chr10 3475467 3475488 -136841277 + AT_rich Low_complexity Low_complexity 1 21 0 360 355 17 29 chr10 3475895 3476067 -136840698 - MIR3 SINE MIR -6 202 33 2225 111 13 3 chr10 3476647 3476954 -136839811 - AluSx SINE Alu 0 312 3 812 163 8 0 chr10 3478363 3478492 -136838273 + FLAM_C SINE Alu 1 130 -13 474 316 21 21 chr10 3479841 3480034 -136836731 + MIR SINE MIR 70 262 0 22 0 0 0 chr10 3480081 3480103 -136836662 + AT_rich Low_complexity Low_complexity 1 22 0 2321 100 0 0 chr10 3480885 3481184 -136835581 + AluSq SINE Alu 1 299 -14 648 102 0 0 chr10 3481404 3481492 -136835273 - MLT1D LTR MaLR -45 460 373 1319 227 96 67 chr10 3481624 3482105 -136834660 + MLT1D LTR MaLR 3 497 -8 440 296 62 40 chr10 3482327 3482631 -136834134 - L1ME4a LINE L1 -262 5859 5549 21 0 0 0 chr10 3483054 3483075 -136833690 + AT_rich Low_complexity Low_complexity 1 21 0 239 361 83 0 chr10 3483089 3483222 -136833543 + MIR SINE MIR 119 262 0 284 257 0 9 chr10 3484566 3484675 -136832090 + (TG)n Simple_repeat Simple_repeat 1 108 0 450 376 0 0 chr10 3484687 3484865 -136831900 + (TG)n Simple_repeat Simple_repeat 1 178 0 21 71 0 0 chr10 3486053 3486095 -136830670 + AT_rich Low_complexity Low_complexity 1 42 0 181 170 0 85 chr10 3486241 3486288 -136830477 + L2 LINE L2 3230 3272 0 511 318 88 10 chr10 3487369 3487561 -136829204 + MIR SINE MIR 11 217 -45 21 36 0 0 chr10 3487632 3487660 -136829105 + AT_rich Low_complexity Low_complexity 1 28 0 357 293 68 63 chr10 3488033 3488477 -136828288 + L1ME4a LINE L1 5569 6014 -107 2334 78 7 0 chr10 3488773 3489239 -136827526 - AluSx SINE Alu 0 468 1 1845 86 37 19 chr10 3490048 3490316 -136826449 + AluY SINE Alu 39 311 0 207 0 0 0 chr10 3490918 3490941 -136825824 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 532 148 0 0 chr10 3490943 3491024 -136825741 - AluSp/q SINE Alu -21 292 212 289 311 78 26 chr10 3491843 3492036 -136824729 - Charlie8 DNA MER1_type -2190 227 25 979 207 85 48 chr10 3492114 3492466 -136824299 - MLT1A1 LTR MaLR 0 365 1 353 308 135 39 chr10 3493413 3493672 -136823093 - L2 LINE L2 -1415 1899 1666 3057 75 5 5 chr10 3493672 3494085 -136822680 - L1PA10 LINE L1 0 6168 5756 353 308 135 39 chr10 3494085 3494283 -136822482 - L2 LINE L2 -1648 1666 1398 2354 72 0 3 chr10 3495040 3495332 -136821433 + AluY SINE Alu 21 311 0 227 339 0 0 chr10 3495379 3495441 -136821324 + MIR SINE MIR 58 119 -143 514 222 157 0 chr10 3495890 3496075 -136820690 + L1ME2 LINE L1 4698 4911 -1235 233 330 35 0 chr10 3496146 3496261 -136820504 + L1ME2 LINE L1 5010 5128 -1018 * 1522 252 102 10 chr10 3496231 3496976 -136819789 + L1ME2 LINE L1 5330 6156 -14 1081 197 0 0 chr10 3497760 3497963 -136818802 + L1PA16 LINE L1 1 203 -6646 * 12353 197 18 19 chr10 3497960 3502056 -136814709 + L1PA16 LINE L1 998 5098 -1771 195 42 0 0 chr10 3502056 3502080 -136814685 + (CA)n Simple_repeat Simple_repeat 1 24 0 12353 197 18 19 chr10 3502080 3503548 -136813217 + L1PA16 LINE L1 5098 6565 -304 313 64 0 0 chr10 3503557 3503604 -136813161 - Alu SINE Alu 0 302 256 1498 164 13 41 chr10 3503604 3503922 -136812843 + L1PA16 LINE L1 6559 6867 -2 30 27 0 0 chr10 3503978 3504015 -136812750 + AT_rich Low_complexity Low_complexity 1 37 0 186 167 0 0 chr10 3504045 3504081 -136812684 + (TA)n Simple_repeat Simple_repeat 2 37 0 583 114 0 11 chr10 3505104 3505192 -136811573 - AluS SINE Alu -225 88 2 783 157 15 66 chr10 3505460 3505658 -136811107 - MER65A LTR ERV1 -2 443 256 27 49 0 0 chr10 3506648 3506689 -136810076 + AT_rich Low_complexity Low_complexity 1 41 0 288 130 0 0 chr10 3507369 3507415 -136809350 + (T)n Simple_repeat Simple_repeat 1 46 0 277 239 138 62 chr10 3508558 3508818 -136807947 + L1ME4a LINE L1 5492 5771 -350 249 260 30 0 chr10 3509082 3509182 -136807583 + L1ME4a LINE L1 6003 6105 -16 29 47 0 0 chr10 3509253 3509296 -136807469 + AT_rich Low_complexity Low_complexity 1 43 0 923 105 0 30 chr10 3509310 3509443 -136807322 - FLAM_C SINE Alu -6 137 9 193 56 28 28 chr10 3510660 3510696 -136806069 + (TTTTTG)n Simple_repeat Simple_repeat 3 38 0 225 291 108 7 chr10 3510724 3510872 -136805893 - MER103 DNA DNA -2 164 2 4134 72 18 0 chr10 3511801 3512356 -136804409 + L1PB1 LINE L1 5583 6147 -4 284 234 85 21 chr10 3512879 3512973 -136803792 - L2 LINE L2 -11 3261 3162 1829 173 21 0 chr10 3512990 3513326 -136803439 + MER7A DNA MER2_type 6 346 0 22 0 0 0 chr10 3514429 3514451 -136802314 + AT_rich Low_complexity Low_complexity 1 22 0 430 223 47 7 chr10 3517091 3517239 -136799526 + MER53 DNA DNA 8 161 -28 1087 206 54 97 chr10 3517511 3517893 -136798872 + MLT1C LTR MaLR 22 390 0 1272 299 103 23 chr10 3518161 3518863 -136797902 + L1ME3A LINE L1 5383 6140 -30 1442 127 0 49 chr10 3518904 3519092 -136797673 - L1PB1 LINE L1 -1 6150 5975 1980 124 64 3 chr10 3519092 3519375 -136797390 - AluSc SINE Alu -9 300 1 1442 127 0 49 chr10 3519375 3519431 -136797334 - L1PB1 LINE L1 -176 5975 5918 401 233 10 19 chr10 3519457 3519560 -136797205 - MLT2D LTR ERVL -230 184 83 852 317 70 19 chr10 3519842 3520789 -136795976 - L1MC4a LINE L1 -831 5315 4948 221 360 107 0 chr10 3522144 3522294 -136794471 - L2 LINE L2 -2050 1264 1099 207 88 0 0 chr10 3522415 3522449 -136794316 + (TC)n Simple_repeat Simple_repeat 2 35 0 302 326 17 76 chr10 3523332 3523504 -136793261 - MER5B DNA MER1_type -15 163 2 29 0 0 0 chr10 3524149 3524178 -136792587 + AT_rich Low_complexity Low_complexity 1 29 0 528 167 10 0 chr10 3524512 3524614 -136792151 - FLAM_A SINE Alu -4 138 36 556 285 52 10 chr10 3524614 3524919 -136791846 + MLT1J LTR MaLR 40 357 -154 1021 103 27 0 chr10 3524936 3525082 -136791683 + BC200 scRNA scRNA 1 150 -50 241 186 57 129 chr10 3525083 3525183 -136791582 + MLT1J LTR MaLR 394 485 -26 3822 76 39 9 chr10 3525183 3525744 -136791021 - L1PA10 LINE L1 0 6168 5606 241 186 57 129 chr10 3525744 3525767 -136790998 + MLT1J LTR MaLR 485 508 -3 2266 69 26 23 chr10 3526830 3527136 -136789629 - AluSq SINE Alu -6 307 1 231 262 12 0 chr10 3527797 3527881 -136788884 - MER53 DNA DNA 0 189 105 461 108 0 48 chr10 3529858 3529941 -136786824 - L1PA10 LINE L1 0 6168 6090 798 19 37 0 chr10 3529941 3530049 -136786716 + L1P LINE L1 5316 5427 -734 450 286 136 15 chr10 3530180 3530386 -136786379 - MIR SINE MIR -18 244 14 199 329 101 25 chr10 3531173 3531331 -136785434 - MIR SINE MIR -9 253 84 2453 68 0 0 chr10 3532669 3532965 -136783800 - AluY SINE Alu -15 296 1 23 54 0 0 chr10 3533128 3533165 -136783600 + AT_rich Low_complexity Low_complexity 1 37 0 460 266 154 0 chr10 3533490 3533678 -136783087 - MLT1L LTR MaLR -8 607 391 219 307 13 13 chr10 3533948 3534023 -136782742 - L2 LINE L2 0 3272 3198 929 178 6 12 chr10 3534947 3535110 -136781655 - FRAM SINE Alu -14 162 1 516 193 106 19 chr10 3535121 3535282 -136781483 + Charlie1b DNA MER1_type 109 283 -240 819 198 11 21 chr10 3537855 3538042 -136778723 - AluJo SINE Alu -13 299 115 2196 229 59 39 chr10 3538522 3539115 -136777650 - MER77 LTR ERV1 0 605 1 362 304 26 41 chr10 3539322 3539516 -136777249 + MLT1K LTR MaLR 154 344 -244 447 86 14 20 chr10 3539633 3539718 -136777047 - MLT1E1 LTR MaLR -512 81 1 257 254 33 90 chr10 3539721 3539843 -136776922 - MIR SINE MIR -67 195 81 1236 221 60 62 chr10 3540127 3540543 -136776222 + MLT1C LTR MaLR 9 423 -44 780 184 6 34 chr10 3540689 3540851 -136775914 - L1ME LINE L1 -547 5574 5421 * 3757 201 89 10 chr10 3540849 3542086 -136774679 - L1MB8 LINE L1 -4 6174 4834 2062 143 0 7 chr10 3542302 3542479 -136774286 - AluSx SINE Alu -6 306 130 189 74 0 0 chr10 3542479 3542506 -136774259 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2062 143 0 7 chr10 3542506 3542636 -136774129 - AluSx SINE Alu -182 130 1 1118 196 86 8 chr10 3543030 3543275 -136773490 + MLT1C LTR MaLR 1 264 -203 296 254 83 55 chr10 3545442 3545623 -136771142 - MIR SINE MIR -6 256 71 237 160 40 20 chr10 3545771 3545821 -136770944 + MIR SINE MIR 90 140 -122 198 0 0 0 chr10 3545929 3545951 -136770814 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 2137 118 3 0 chr10 3546333 3546620 -136770145 + AluSx SINE Alu 6 293 -19 1523 224 80 23 chr10 3546832 3547269 -136769496 - MLT1C LTR MaLR 0 467 6 253 300 50 25 chr10 3547384 3547504 -136769261 - MLT1J2 LTR MaLR -45 405 283 1303 213 66 18 chr10 3547635 3548015 -136768750 + L1M4 LINE L1 4901 5298 -848 464 275 178 51 chr10 3548040 3548652 -136768113 + L2 LINE L2 2625 3311 -2 232 277 213 19 chr10 3548707 3548862 -136767903 - L1ME4a LINE L1 -96 6025 5841 229 253 133 0 chr10 3548914 3548989 -136767776 - L1ME4a LINE L1 -2108 5700 5616 1734 87 101 56 chr10 3549065 3549351 -136767414 - AluSg SINE Alu -9 301 3 2056 144 3 3 chr10 3549883 3550195 -136766570 + AluSx SINE Alu 1 312 0 1265 285 93 24 chr10 3550233 3550784 -136765981 + MLT1E LTR MaLR 5 593 0 338 335 153 0 chr10 3551062 3551232 -136765533 + LTR41 LTR ERVL 342 537 -236 331 153 0 0 chr10 3551336 3551395 -136765370 - AluS SINE Alu -248 60 2 254 358 75 11 chr10 3551674 3551861 -136764904 - MIR SINE MIR -40 222 24 350 299 76 28 chr10 3552120 3552150 -136764615 - MIR3 SINE MIR -33 175 148 2119 115 0 20 chr10 3552150 3552455 -136764310 - AluSx SINE Alu -13 299 1 350 299 76 28 chr10 3552455 3552568 -136764197 - MIR3 SINE MIR -60 148 25 303 253 126 0 chr10 3552860 3552955 -136763810 - L2 LINE L2 -747 2567 2461 1718 161 16 20 chr10 3553829 3554133 -136762632 + AluJo SINE Alu 1 303 -9 474 254 8 8 chr10 3554332 3554450 -136762315 + L2 LINE L2 3193 3310 -3 363 23 0 0 chr10 3605670 3605714 -136711051 + (TG)n Simple_repeat Simple_repeat 1 44 0 1550 99 5 0 chr10 3606388 3606601 -136710164 - AluSq SINE Alu -18 295 82 282 324 50 22 chr10 3606601 3606732 -136710033 - MIR SINE MIR -76 186 49 207 200 24 47 chr10 3607187 3607272 -136709493 + (CCCG)n Simple_repeat Simple_repeat 2 84 0 248 310 80 0 chr10 3607756 3607869 -136708896 - MIR SINE MIR -55 207 86 23 0 0 0 chr10 3608167 3608190 -136708575 + AT_rich Low_complexity Low_complexity 1 23 0 705 133 0 17 chr10 3608256 3608376 -136708389 - L1PA13 LINE L1 -1 6162 6045 206 261 138 0 chr10 3608878 3608943 -136707822 + MIR SINE MIR 189 262 0 425 155 0 39 chr10 3608990 3609093 -136707672 - L1PA2 LINE L1 0 6155 6057 56 86 0 0 chr10 3609142 3609282 -136707483 + GC_rich Low_complexity Low_complexity 1 140 0 504 189 0 0 chr10 3609441 3609584 -136707181 + (CA)n Simple_repeat Simple_repeat 1 143 0 314 80 20 0 chr10 3609698 3609748 -136707017 + MADE1 DNA Mariner 30 80 0 183 80 0 0 chr10 3611135 3611160 -136705605 + (A)n Simple_repeat Simple_repeat 1 25 0 231 280 23 76 chr10 3611355 3611487 -136705278 + L2 LINE L2 3189 3313 0 * 426 333 77 16 chr10 3611481 3611664 -136705101 - MIR SINE MIR -18 244 51 1648 123 19 112 chr10 3612588 3612962 -136703803 - MER44D DNA MER2_type 0 609 1 201 39 0 0 chr10 3613007 3613033 -136703732 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 324 264 66 16 chr10 3614397 3614518 -136702247 + MIR SINE MIR 107 233 -29 517 192 24 6 chr10 3614923 3615267 -136701498 + (TG)n Simple_repeat Simple_repeat 1 350 0 181 371 171 12 chr10 3615726 3615896 -136700869 - MIR SINE MIR -20 242 46 941 151 0 17 chr10 3617011 3617183 -136699582 - L1MA5A LINE L1 -7 6290 6122 391 323 65 26 chr10 3619422 3619654 -136697111 - L2 LINE L2 0 3313 3073 291 295 213 22 chr10 3619689 3620055 -136696710 - L2 LINE L2 -342 2972 2537 209 373 18 9 chr10 3620439 3620549 -136696216 - MIR SINE MIR -127 135 25 275 265 0 10 chr10 3620659 3620757 -136696008 + (TATG)n Simple_repeat Simple_repeat 2 98 0 26 0 0 0 chr10 3620787 3620813 -136695952 + AT_rich Low_complexity Low_complexity 1 26 0 1645 175 0 4 chr10 3621168 3621448 -136695317 + AluJb SINE Alu 1 279 -33 230 200 40 0 chr10 3621458 3621508 -136695257 - MLT1A1 LTR MaLR -313 52 1 1970 25 0 4 chr10 3623660 3623901 -136692864 - L1P LINE L1 -779 5367 5128 1222 14 0 0 chr10 3623901 3624046 -136692719 + L1P LINE L1 4981 5125 -1021 22 0 0 0 chr10 3624279 3624301 -136692464 + AT_rich Low_complexity Low_complexity 1 22 0 402 277 42 0 chr10 3624847 3624966 -136691799 + L1MC4 LINE L1 6580 6703 -1339 351 213 32 75 chr10 3624958 3625052 -136691713 + L1MC4 LINE L1 6614 6703 -1339 * 464 313 13 13 chr10 3625680 3625830 -136690935 + MIR SINE MIR 2 151 -111 399 154 0 154 chr10 3625837 3625941 -136690824 - MER1B DNA MER1_type 0 329 242 246 149 15 119 chr10 3625993 3626060 -136690705 - MER1B DNA MER1_type -63 276 217 561 314 49 14 chr10 3626197 3626420 -136690345 + HERVL LTR ERVL 3321 3551 -2213 1042 307 172 29 chr10 3626507 3627422 -136689343 + HERVL LTR ERVL 3621 4671 -852 344 291 208 21 chr10 3628056 3628297 -136688468 + LTR33 LTR ERVL 3 288 -233 4670 151 46 15 chr10 3628607 3629748 -136687017 - L1MA5A LINE L1 -195 6102 4939 * 5075 172 22 27 chr10 3629741 3630752 -136686013 + L1MA5A LINE L1 3932 4937 -1209 651 278 116 4 chr10 3630765 3631006 -136685759 + L2 LINE L2 3022 3289 -24 1563 133 8 0 chr10 3633546 3633787 -136682978 - AluSx SINE Alu -15 297 55 798 207 101 30 chr10 3634640 3635073 -136681692 - MLT1D LTR MaLR 0 505 1 241 290 168 23 chr10 3635245 3635376 -136681389 - MIR SINE MIR -40 222 73 289 304 18 36 chr10 3635421 3635533 -136681232 - MIR SINE MIR -88 174 65 234 273 0 0 chr10 3636235 3636290 -136680475 - HAL1 LINE L1 -811 1696 1642 242 339 0 0 chr10 3636951 3637016 -136679749 + L2 LINE L2 3249 3313 0 427 296 71 12 chr10 3637459 3637699 -136679066 - HAL1 LINE L1 -744 1763 1510 850 64 0 0 chr10 3638764 3638873 -136677892 - L1P LINE L1 -5129 1017 909 3670 47 0 24 chr10 3638873 3639373 -136677392 + L1PA4 LINE L1 5686 6174 0 230 0 33 0 chr10 3643403 3643433 -136673332 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 1916 114 78 0 chr10 3643474 3643745 -136673020 + AluSg SINE Alu 1 292 -18 407 228 44 0 chr10 3645355 3645469 -136671296 + MIR SINE MIR 26 144 -118 1507 232 16 16 chr10 3645763 3646130 -136670635 + MLT1B LTR MaLR 8 374 -16 338 182 15 0 chr10 3646559 3646625 -136670140 - L1MA7 LINE L1 -428 5863 5797 267 279 46 82 chr10 3647051 3647270 -136669495 - L2 LINE L2 -2 3311 3101 2087 140 3 3 chr10 3647321 3647629 -136669136 - AluSx SINE Alu -4 308 1 337 291 35 70 chr10 3648272 3648359 -136668406 + L3 LINE CR1 1144 1224 -353 2056 140 0 3 chr10 3648359 3648651 -136668114 + AluSc SINE Alu 1 291 -18 337 291 35 70 chr10 3648651 3648735 -136668030 + L3 LINE CR1 1224 1309 -268 185 319 42 0 chr10 3649639 3649711 -136667054 - MIR SINE MIR -117 145 71 1163 225 49 70 chr10 3649877 3650263 -136666502 - MLT1B LTR MaLR -10 380 3 318 258 68 53 chr10 3650403 3650535 -136666230 - MIR SINE MIR -107 155 22 200 150 0 50 chr10 3652551 3652591 -136664174 + L2 LINE L2 3223 3260 -12 217 316 32 21 chr10 3655153 3655248 -136661517 - MER5A DNA MER1_type 0 189 94 215 229 21 0 chr10 3655352 3655400 -136661365 + CT-rich Low_complexity Low_complexity 4 52 0 311 277 21 7 chr10 3655533 3655654 -136661111 - MIR SINE MIR -74 134 15 226 189 0 0 chr10 3656439 3656476 -136660289 - LTR33 LTR ERVL 0 521 485 261 270 34 34 chr10 3656675 3656764 -136660001 - MERVL LTR ERVL -2286 3199 3111 1947 304 58 16 chr10 3657120 3657910 -136658855 - MERVL LTR ERVL -3048 2716 1894 223 329 12 75 chr10 3657973 3658134 -136658631 - L2 LINE L2 -888 2426 2276 1138 133 0 0 chr10 3658244 3658402 -136658363 + AluSc SINE Alu 135 292 -17 586 330 14 0 chr10 3658464 3658673 -136658092 - L2 LINE L2 -1259 2055 1844 285 51 0 0 chr10 3659771 3659810 -136656955 + (TG)n Simple_repeat Simple_repeat 2 40 0 332 128 0 0 chr10 3660085 3660132 -136656633 + AluJ/FLAM SINE Alu 14 60 -242 674 179 0 16 chr10 3660132 3660255 -136656510 - AluJo SINE Alu -122 190 70 252 0 0 0 chr10 3660277 3660305 -136656460 + (A)n Simple_repeat Simple_repeat 1 28 0 189 0 0 0 chr10 3660305 3660326 -136656439 + (GA)n Simple_repeat Simple_repeat 2 22 0 987 201 22 35 chr10 3660774 3661003 -136655762 + AluJo SINE Alu 71 296 -16 189 0 0 0 chr10 3662386 3662407 -136654358 + (TC)n Simple_repeat Simple_repeat 2 22 0 1725 176 7 21 chr10 3662422 3662712 -136654053 - AluJo SINE Alu -25 287 2 192 40 0 0 chr10 3663023 3663048 -136653717 + (A)n Simple_repeat Simple_repeat 1 25 0 281 262 36 12 chr10 3664671 3664755 -136652010 + MER103 DNA DNA 57 142 -24 2998 101 10 2 chr10 3664863 3665279 -136651486 + L1PB1 LINE L1 5720 6138 -13 194 0 39 0 chr10 3665282 3665308 -136651457 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 292 176 14 14 chr10 3665323 3665397 -136651368 + (CATATA)n Simple_repeat Simple_repeat 2 75 0 2720 30 0 0 chr10 3666791 3667092 -136649673 - AluY SINE Alu -10 301 1 225 154 0 0 chr10 3668160 3668199 -136648566 + CT-rich Low_complexity Low_complexity 2 40 0 21 0 0 0 chr10 3668846 3668867 -136647898 + GC_rich Low_complexity Low_complexity 1 21 0 516 252 35 0 chr10 3668867 3669010 -136647755 + MER5A DNA MER1_type 42 189 0 181 219 0 0 chr10 3669091 3669132 -136647633 + MER5B DNA MER1_type 5 45 -133 270 0 0 0 chr10 3669314 3669344 -136647421 + (TG)n Simple_repeat Simple_repeat 1 30 0 627 291 110 68 chr10 3669848 3670395 -136646370 + MLT1K LTR MaLR 14 583 -5 2159 112 7 3 chr10 3670773 3671067 -136645698 + AluSx SINE Alu 1 295 -17 2375 76 0 0 chr10 3671794 3672084 -136644681 - AluSc SINE Alu -19 290 1 218 256 11 67 chr10 3672824 3672873 -136643892 + L2 LINE L2 3184 3227 -45 3988 137 9 16 chr10 3672873 3672992 -136643773 - MER41B LTR ERV1 -2 633 515 2163 115 26 10 chr10 3672992 3673297 -136643468 + AluSq SINE Alu 1 310 -3 3988 137 9 16 chr10 3673297 3673814 -136642951 - MER41B LTR ERV1 -120 515 1 218 256 11 67 chr10 3673814 3673854 -136642911 + L2 LINE L2 3227 3268 -4 940 244 110 60 chr10 3673932 3674468 -136642297 + HAL1 LINE L1 1427 1989 -518 221 313 52 26 chr10 3674469 3674584 -136642181 + L2 LINE L2 3151 3268 -4 589 282 74 29 chr10 3674740 3675091 -136641674 + HAL1 LINE L1 2120 2486 -21 2246 207 76 8 chr10 3675183 3675694 -136641071 + MER44D DNA MER2_type 1 601 -4 273 285 179 20 chr10 3676920 3677071 -136639694 + MIR3 SINE MIR 8 182 -26 249 162 73 0 chr10 3679101 3679169 -136637596 + MIR SINE MIR 73 145 -117 725 296 73 54 chr10 3679495 3680121 -136636644 + L1MEc LINE L1 1593 2230 -4166 901 266 94 16 chr10 3680162 3680598 -136636167 + L1MEc LINE L1 2272 2741 -3474 306 243 110 143 chr10 3680614 3680915 -136635850 + L1MEc LINE L1 3051 3341 -2874 2472 195 133 16 chr10 3682483 3683113 -136633652 + MER39 LTR ERV1 4 707 0 23 33 0 0 chr10 3685528 3685558 -136631207 + AT_rich Low_complexity Low_complexity 1 30 0 2604 58 0 0 chr10 3685634 3685945 -136630820 - AluY SINE Alu 0 311 1 202 295 13 13 chr10 3687287 3687365 -136629400 - MIR SINE MIR -17 245 168 212 317 46 63 chr10 3687465 3687749 -136629016 + L2 LINE L2 2212 2490 -824 195 42 0 0 chr10 3687749 3687773 -136628992 + (TCCC)n Simple_repeat Simple_repeat 3 26 0 200 349 0 0 chr10 3689440 3689503 -136627262 + (CACG)n Simple_repeat Simple_repeat 2 64 0 2261 111 0 16 chr10 3689921 3690236 -136626529 + AluSx SINE Alu 1 310 -2 2255 65 0 7 chr10 3691360 3691635 -136625130 - AluY SINE Alu 0 311 39 719 317 80 47 chr10 3692232 3692476 -136624289 - L1ME LINE L1 -4993 1090 856 2254 115 0 0 chr10 3692476 3692772 -136623993 - AluSx SINE Alu -16 296 1 719 317 80 47 chr10 3692772 3693564 -136623201 - L1ME LINE L1 -5227 856 22 235 236 67 118 chr10 3693756 3694053 -136622712 - L1M4 LINE L1 -907 5239 4958 455 304 35 47 chr10 3694440 3694611 -136622154 + MIR SINE MIR 24 192 -70 2127 110 3 3 chr10 3694615 3694925 -136621840 + AluSx SINE Alu 3 312 0 609 276 7 73 chr10 3695433 3695708 -136621057 - L2 LINE L2 0 3313 3057 1802 142 48 0 chr10 3697084 3697379 -136619386 + AluSx SINE Alu 1 309 -3 343 296 91 59 chr10 3697520 3697702 -136619063 - L1M4 LINE L1 -1419 4727 4533 2338 106 48 31 chr10 3697702 3698060 -136618705 + THE1B LTR MaLR 1 364 0 343 296 91 59 chr10 3698060 3698130 -136618635 - L1M4 LINE L1 -1613 4533 4467 26 0 0 0 chr10 3698764 3698790 -136617975 + AT_rich Low_complexity Low_complexity 1 26 0 2079 117 0 0 chr10 3699059 3699349 -136617416 - AluSx SINE Alu -1 311 22 600 133 0 0 chr10 3699349 3699432 -136617333 - AluS SINE Alu -228 84 2 360 320 58 29 chr10 3699798 3700004 -136616761 - MIR SINE MIR -3 259 48 225 222 28 14 chr10 3700041 3700113 -136616652 + MLT1F1 LTR MaLR 8 80 -487 272 296 178 0 chr10 3700230 3700399 -136616366 + MLT1G1 LTR MaLR 358 556 -39 405 0 0 0 chr10 3701780 3701825 -136614940 + (CA)n Simple_repeat Simple_repeat 1 45 0 995 188 117 78 chr10 3702039 3702348 -136614417 - MLT1A1 LTR MaLR -32 333 13 378 352 58 19 chr10 3702685 3702758 -136614007 + L1ME LINE L1 5312 5381 -740 249 33 0 0 chr10 3702758 3702788 -136613977 + (TA)n Simple_repeat Simple_repeat 2 31 0 378 352 58 19 chr10 3702788 3703092 -136613673 + L1ME LINE L1 5381 5704 -417 1222 146 34 0 chr10 3703181 3703387 -136613378 + Tigger2 DNA MER2_type 1 213 -2505 886 172 0 49 chr10 3703384 3703482 -136613283 + Tigger2 DNA MER2_type 2554 2642 -66 * 1991 116 103 3 chr10 3703482 3703802 -136612963 - THE1A LTR MaLR 0 355 4 886 172 0 49 chr10 3703802 3703866 -136612899 + Tigger2 DNA MER2_type 2642 2708 0 24 0 0 0 chr10 3703933 3703957 -136612808 + AT_rich Low_complexity Low_complexity 1 24 0 391 250 96 13 chr10 3704314 3704470 -136612295 + L1ME LINE L1 5500 5668 -453 612 150 2 74 chr10 3704748 3704919 -136611846 - Charlie3 DNA MER1_type -65 2645 159 264 282 24 0 chr10 3705546 3705630 -136611135 - MIR SINE MIR -62 146 59 21 82 0 0 chr10 3707118 3707167 -136609598 + AT_rich Low_complexity Low_complexity 1 49 0 201 121 0 0 chr10 3707335 3707368 -136609397 + (T)n Simple_repeat Simple_repeat 1 33 0 228 176 27 14 chr10 3708150 3708224 -136608541 + (TA)n Simple_repeat Simple_repeat 2 76 0 246 164 0 0 chr10 3709427 3709482 -136607283 + T-rich Low_complexity Low_complexity 1 55 0 224 322 158 33 chr10 3711279 3711431 -136605334 + MIR3 SINE MIR 30 200 -8 241 174 14 29 chr10 3714962 3715031 -136601734 + A-rich Low_complexity Low_complexity 1 68 0 24 0 0 0 chr10 3715280 3715304 -136601461 + GC_rich Low_complexity Low_complexity 1 24 0 214 160 0 107 chr10 3716216 3716291 -136600474 + C-rich Low_complexity Low_complexity 5 71 0 244 280 42 59 chr10 3718029 3718147 -136598618 - MIR3 SINE MIR -38 170 55 21 0 0 0 chr10 3718542 3718563 -136598202 + AT_rich Low_complexity Low_complexity 1 21 0 1894 128 7 0 chr10 3718901 3719190 -136597575 - AluSx SINE Alu -21 291 1 574 284 100 8 chr10 3719588 3719849 -136596916 + L1ME2 LINE L1 4546 4830 -1316 1369 268 52 32 chr10 3719904 3720575 -136596190 - L1MCc LINE L1 -4888 1535 1217 945 262 0 9 chr10 3720575 3720800 -136595965 - MER58A DNA MER1_type -1 223 1 1369 268 52 32 chr10 3720800 3721009 -136595756 - L1MCc LINE L1 -5206 1217 1014 387 239 44 97 chr10 3721075 3721301 -136595464 - L1MCc LINE L1 -5541 882 669 533 254 178 9 chr10 3721329 3721542 -136595223 - L1MCc LINE L1 -5970 453 205 465 211 28 49 chr10 3721554 3721696 -136595069 - L1MCc LINE L1 -6259 164 26 299 183 33 0 chr10 3721696 3721756 -136595009 + L1ME2 LINE L1 4868 4929 -1217 241 213 0 53 chr10 3721790 3721865 -136594900 + A-rich Low_complexity Low_complexity 1 71 0 341 159 0 14 chr10 3721865 3721934 -136594831 + GA-rich Low_complexity Low_complexity 1 68 0 2216 261 91 27 chr10 3721941 3723057 -136593708 + L1ME2 LINE L1 4960 6152 -12 209 220 17 0 chr10 3723220 3723279 -136593486 + (TGGA)n Simple_repeat Simple_repeat 2 61 0 346 253 13 114 chr10 3723416 3723574 -136593191 + MIR SINE MIR 21 162 -100 201 240 91 66 chr10 3723590 3723711 -136593054 - MIR SINE MIR -36 226 103 2074 112 0 0 chr10 3724479 3724794 -136591971 + AluSx SINE Alu 1 315 0 183 156 0 0 chr10 3726155 3726187 -136590578 + (CACG)n Simple_repeat Simple_repeat 1 32 0 188 67 33 0 chr10 3726675 3726705 -136590060 + (TA)n Simple_repeat Simple_repeat 1 31 0 1730 130 72 4 chr10 3727663 3727939 -136588826 - AluSx SINE Alu -17 295 1 651 240 41 77 chr10 3728426 3728647 -136588118 + MER20 DNA MER1_type 1 213 -6 1581 205 73 6 chr10 3728671 3729013 -136587752 + MLT1A1 LTR MaLR 1 365 0 1616 135 15 0 chr10 3729093 3729352 -136587413 + AluSx SINE Alu 47 309 -3 24 32 0 0 chr10 3729358 3729389 -136587376 + AT_rich Low_complexity Low_complexity 1 31 0 356 327 145 0 chr10 3729598 3729757 -136587008 + MIR SINE MIR 81 262 0 190 269 58 0 chr10 3730284 3730336 -136586429 + L3 LINE CR1 1392 1446 -131 527 189 8 0 chr10 3731645 3731772 -136584993 + CT-rich Low_complexity Low_complexity 2 129 0 1979 121 0 0 chr10 3734025 3734328 -136582437 + AluSx SINE Alu 1 303 0 545 278 168 0 chr10 3734403 3734594 -136582171 - MIR SINE MIR 0 262 40 439 229 18 28 chr10 3734614 3734898 -136581867 + GA-rich Low_complexity Low_complexity 1 280 0 439 149 11 11 chr10 3735997 3736091 -136580674 + CT-rich Low_complexity Low_complexity 3 96 0 180 0 0 0 chr10 3737003 3737023 -136579742 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 238 263 75 25 chr10 3739284 3739364 -136577401 + MIR3 SINE MIR 10 93 -115 290 286 12 0 chr10 3740766 3740850 -136575915 + (CA)n Simple_repeat Simple_repeat 1 85 0 231 36 0 0 chr10 3741366 3741394 -136575371 + (CA)n Simple_repeat Simple_repeat 2 29 0 25 0 0 0 chr10 3741564 3741589 -136575176 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr10 3741626 3741649 -136575116 + AT_rich Low_complexity Low_complexity 1 23 0 359 21 21 0 chr10 3742954 3743002 -136573763 + (GA)n Simple_repeat Simple_repeat 2 50 0 263 191 0 0 chr10 3743623 3743670 -136573095 - MER39 LTR ERV1 -268 439 393 228 143 29 100 chr10 3743718 3743788 -136572977 - MER34 LTR ERV1 -411 131 67 244 214 205 9 chr10 3744398 3744510 -136572255 - MER101 LTR ERV1 -223 251 118 241 121 121 0 chr10 3744720 3744786 -136571979 + (TATAA)n Simple_repeat Simple_repeat 4 77 0 469 96 48 0 chr10 3745358 3745441 -136571324 + T-rich Low_complexity Low_complexity 3 89 0 2124 137 16 0 chr10 3745446 3745752 -136571013 - AluSq SINE Alu 0 313 3 2182 113 3 0 chr10 3745754 3746046 -136570719 - AluSx SINE Alu -13 299 7 2068 126 0 19 chr10 3746079 3746397 -136570368 - AluSx SINE Alu 0 312 1 237 159 0 0 chr10 3747085 3747129 -136569636 + (CA)n Simple_repeat Simple_repeat 1 44 0 201 154 0 0 chr10 3747129 3747168 -136569597 + (TG)n Simple_repeat Simple_repeat 2 40 0 482 374 62 10 chr10 3747347 3747748 -136569017 - L2 LINE L2 -27 3286 2865 450 293 120 4 chr10 3748054 3748313 -136568452 - L2 LINE L2 -923 2391 2103 343 329 6 32 chr10 3749659 3749817 -136566948 + MER63A DNA MER1_type 36 189 -21 24 53 0 0 chr10 3751201 3751239 -136565526 + AT_rich Low_complexity Low_complexity 1 38 0 473 135 73 21 chr10 3751513 3751609 -136565156 + MER4A LTR ERV1 1 101 -563 * 1878 123 6 25 chr10 3751608 3751958 -136564807 + MER4A LTR ERV1 263 664 0 2116 108 22 0 chr10 3752149 3752450 -136564315 + AluSq SINE Alu 1 307 0 340 316 84 33 chr10 3752462 3752854 -136563911 - L2 LINE L2 -422 2892 2481 538 263 45 58 chr10 3752942 3753166 -136563599 + MLT1E LTR MaLR 27 247 -346 3609 148 45 54 chr10 3753166 3753743 -136563022 + L1MA8 LINE L1 5560 6130 -161 2340 139 55 0 chr10 3753743 3754125 -136562640 - MER57A LTR ERV1 0 403 1 3609 148 45 54 chr10 3754125 3754285 -136562480 + L1MA8 LINE L1 6130 6290 -1 251 244 0 39 chr10 3754285 3754355 -136562410 + MLT1E LTR MaLR 521 589 -4 666 290 128 5 chr10 3754361 3754744 -136562021 - L2 LINE L2 -940 2374 1945 345 123 12 37 chr10 3754861 3754942 -136561823 + (TTCTC)n Simple_repeat Simple_repeat 3 81 0 * 635 94 10 0 chr10 3754928 3755024 -136561741 + (TTCC)n Simple_repeat Simple_repeat 3 99 0 1592 193 43 3 chr10 3755037 3755337 -136561428 - AluJb SINE Alu 0 312 1 2121 114 0 35 chr10 3755698 3756015 -136560750 - AluY SINE Alu -5 306 1 1543 206 96 54 chr10 3756040 3756226 -136560539 + MLT2B2 LTR ERVL 3 180 -335 4564 125 25 10 chr10 3756226 3756907 -136559858 - LTR8 LTR ERV1 0 691 1 1543 206 96 54 chr10 3756907 3757147 -136559618 + MLT2B2 LTR ERVL 180 447 -68 186 43 0 0 chr10 3757150 3757173 -136559592 + (CATATA)n Simple_repeat Simple_repeat 5 27 0 215 170 0 19 chr10 3757173 3757226 -136559539 + (TG)n Simple_repeat Simple_repeat 2 53 0 306 329 79 14 chr10 3757298 3757438 -136559327 - HAL1 LINE L1 -1131 1376 1228 291 157 0 0 chr10 3757547 3757598 -136559167 + (CA)n Simple_repeat Simple_repeat 2 52 0 249 211 0 0 chr10 3757633 3757690 -136559075 + (TATATG)n Simple_repeat Simple_repeat 1 57 0 249 308 93 0 chr10 3757694 3757801 -136558964 + L2 LINE L2 3156 3272 0 22 0 0 0 chr10 3757847 3757869 -136558896 + AT_rich Low_complexity Low_complexity 1 22 0 2061 80 30 36 chr10 3758347 3758519 -136558246 - AluY SINE Alu -9 302 131 221 0 0 33 chr10 3758519 3758549 -136558216 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2061 80 30 36 chr10 3758549 3758678 -136558087 - AluY SINE Alu -180 131 3 448 294 47 56 chr10 3758711 3758925 -136557840 - HAL1 LINE L1 -1144 1363 1152 728 228 7 0 chr10 3759302 3759451 -136557314 + FRAM SINE Alu 9 158 -18 2073 112 0 4 chr10 3759459 3759773 -136556992 + AluSx SINE Alu 9 321 0 25 31 0 0 chr10 3759816 3759848 -136556917 + AT_rich Low_complexity Low_complexity 1 32 0 1278 99 0 6 chr10 3760917 3761088 -136555677 - AluSg/x SINE Alu -18 294 125 216 0 0 0 chr10 3763040 3763064 -136553701 + (A)n Simple_repeat Simple_repeat 1 24 0 425 328 52 35 chr10 3813277 3813317 -136503448 - MLT1K LTR MaLR -5 583 545 1815 129 23 42 chr10 3813317 3813626 -136503139 - AluSq SINE Alu -10 303 1 425 328 52 35 chr10 3813626 3813814 -136502951 - MLT1K LTR MaLR -43 545 351 24 0 0 0 chr10 3814380 3814404 -136502361 + AT_rich Low_complexity Low_complexity 1 24 0 1384 164 4 9 chr10 3814404 3814630 -136502135 - AluSx SINE Alu -87 225 1 1365 134 5 0 chr10 3814632 3814848 -136501917 - AluSq SINE Alu -2 311 95 1983 149 3 0 chr10 3815585 3815893 -136500872 - AluSx SINE Alu -2 310 2 22 0 0 0 chr10 3816511 3816533 -136500232 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr10 3816572 3816604 -136500161 + AT_rich Low_complexity Low_complexity 1 32 0 1619 114 0 48 chr10 3816606 3816877 -136499888 - AluSc SINE Alu -7 302 45 1831 158 0 0 chr10 3818329 3818620 -136498145 + AluSx SINE Alu 1 291 -21 222 128 0 0 chr10 3818875 3818914 -136497851 + (CA)n Simple_repeat Simple_repeat 1 39 0 22 35 0 0 chr10 3819143 3819172 -136497593 + AT_rich Low_complexity Low_complexity 1 29 0 2300 64 0 10 chr10 3819750 3820045 -136496720 + AluY SINE Alu 1 292 -19 2303 169 14 43 chr10 3820886 3821019 -136495746 + MSTC LTR MaLR 2 137 -291 949 125 0 18 chr10 3821019 3821187 -136495578 + (TTTC)n Simple_repeat Simple_repeat 4 168 0 1880 139 0 0 chr10 3821187 3821467 -136495298 - AluSx SINE Alu -32 280 1 2303 169 14 43 chr10 3821467 3821770 -136494995 + MSTC LTR MaLR 135 426 -2 213 206 48 16 chr10 3823182 3823245 -136493520 + (CAGGG)n Simple_repeat Simple_repeat 2 66 0 279 273 45 50 chr10 3823813 3823970 -136492795 - MIR3 SINE MIR -62 146 8 806 189 0 0 chr10 3824552 3824684 -136492081 - THE1C LTR MaLR -243 132 1 198 0 0 0 chr10 3824849 3824871 -136491894 + (TC)n Simple_repeat Simple_repeat 2 23 0 214 236 125 28 chr10 3824913 3824985 -136491780 - L2 LINE L2 -20 3252 3174 1893 130 34 0 chr10 3825335 3825628 -136491137 - AluSx SINE Alu -9 303 1 814 185 72 5 chr10 3827465 3827660 -136489105 + MSTA LTR MaLR 1 208 -220 1975 107 66 19 chr10 3827689 3828008 -136488757 + MSTA LTR MaLR 95 428 0 522 278 99 61 chr10 3828085 3828719 -136488046 + L2 LINE L2 2646 3308 -5 960 112 0 0 chr10 3829379 3829513 -136487252 + AluSg SINE Alu 1 134 -176 2422 63 0 0 chr10 3829513 3829812 -136486953 + AluY SINE Alu 1 299 -12 1766 191 16 22 chr10 3829883 3830250 -136486515 + MLT1A1 LTR MaLR 1 365 0 617 165 61 9 chr10 3830608 3830723 -136486042 - AluJo SINE Alu -176 136 16 1941 134 3 0 chr10 3831010 3831293 -136485472 + AluSx SINE Alu 6 289 -23 2675 185 25 10 chr10 3831326 3831845 -136484920 + L1MA9 LINE L1 5783 6309 -3 25 31 0 0 chr10 3831848 3831880 -136484885 + AT_rich Low_complexity Low_complexity 1 32 0 1798 145 3 0 chr10 3832655 3833118 -136483647 + AluSx SINE Alu 7 470 0 209 143 0 41 chr10 3833122 3833171 -136483594 + (GGAA)n Simple_repeat Simple_repeat 3 49 0 333 338 89 43 chr10 3834034 3834730 -136482035 - L2 LINE L2 -1303 2011 1284 863 98 0 38 chr10 3834842 3835026 -136481739 + (CCCTAA)n Simple_repeat Simple_repeat 2 178 0 191 143 63 48 chr10 3835045 3835108 -136481657 - L2 LINE L2 -2185 1129 1066 471 241 102 80 chr10 3835116 3835192 -136481573 - MLT1J LTR MaLR -4 507 434 1852 142 0 57 chr10 3835192 3835523 -136481242 - AluSx SINE Alu 0 312 1 471 241 102 80 chr10 3835523 3835720 -136481045 - MLT1J LTR MaLR -77 434 228 2354 77 3 0 chr10 3836236 3836536 -136480229 - AluSp SINE Alu -12 301 1 195 245 0 20 chr10 3836559 3836608 -136480157 - L2 LINE L2 0 3313 3266 247 266 13 0 chr10 3837417 3837496 -136479269 + (AATAG)n Simple_repeat Simple_repeat 4 83 0 656 216 15 26 chr10 3837657 3838002 -136478763 + CT-rich Low_complexity Low_complexity 1 340 0 26 0 0 0 chr10 3838258 3838284 -136478481 + AT_rich Low_complexity Low_complexity 1 26 0 240 215 92 15 chr10 3838396 3838461 -136478304 - L2 LINE L2 -62 3251 3182 376 251 20 29 chr10 3838497 3838610 -136478155 + L1MC1 LINE L1 6216 6329 -15 1844 154 3 0 chr10 3838610 3838921 -136477844 + AluJb SINE Alu 1 312 0 376 251 20 29 chr10 3838921 3838936 -136477829 + L1MC1 LINE L1 6329 6343 -1 208 317 54 48 chr10 3839058 3839225 -136477540 - L2 LINE L2 -252 3020 2853 262 211 218 30 chr10 3839339 3839472 -136477293 - L1ME3 LINE L1 -2 6160 6003 462 266 68 34 chr10 3839751 3839928 -136476837 + MIR SINE MIR 33 215 -47 225 0 0 0 chr10 3840309 3840334 -136476431 + (T)n Simple_repeat Simple_repeat 1 25 0 1125 211 4 4 chr10 3841269 3841496 -136475269 + L1PA15 LINE L1 5939 6165 0 21 0 0 0 chr10 3842062 3842083 -136474682 + AT_rich Low_complexity Low_complexity 1 21 0 744 257 19 10 chr10 3842410 3842616 -136474149 + MIR SINE MIR 41 248 -14 2160 113 3 0 chr10 3842622 3842923 -136473842 - AluSx SINE Alu -10 302 1 341 228 0 38 chr10 3843483 3843562 -136473203 - MLT1G LTR MaLR -474 81 6 6250 166 17 8 chr10 3844052 3845393 -136471372 + L1PA8 LINE L1 4819 6166 -6 207 0 0 0 chr10 3845982 3846005 -136470760 + (T)n Simple_repeat Simple_repeat 1 23 0 1709 119 65 25 chr10 3847361 3847638 -136469127 - AluJo SINE Alu -24 288 1 2059 127 0 0 chr10 3848015 3848335 -136468430 - AluSq SINE Alu 0 320 1 2061 107 37 0 chr10 3849743 3850041 -136466724 - AluY SINE Alu -2 309 1 201 39 0 0 chr10 3850103 3850129 -136466636 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 285 319 80 0 chr10 3852521 3852634 -136464131 + MIR SINE MIR 119 240 -22 273 295 137 18 chr10 3852634 3852970 -136463795 - LTR16A LTR ERVL -4 446 71 22 0 0 0 chr10 3853617 3853639 -136463126 + AT_rich Low_complexity Low_complexity 1 22 0 1523 203 3 13 chr10 3854407 3854712 -136462053 - AluJo SINE Alu -10 302 1 641 313 127 17 chr10 3855737 3856156 -136460609 + MER69 DNA AcHobo 120 584 -642 * 1280 218 56 28 chr10 3856149 3856311 -136460454 + MER69 DNA AcHobo 2026 2182 -344 1846 167 0 3 chr10 3856311 3856611 -136460154 - AluJo SINE Alu -13 299 1 1280 218 56 28 chr10 3856611 3856874 -136459891 + MER69 DNA AcHobo 2182 2463 -63 372 302 54 0 chr10 3857521 3857650 -136459115 + L2 LINE L2 3173 3308 -5 463 311 178 68 chr10 3857689 3858269 -136458496 - L3 LINE CR1 -47 1530 856 2121 104 10 3 chr10 3858269 3858558 -136458207 - AluSg SINE Alu -19 291 1 463 311 178 68 chr10 3858558 3858692 -136458073 - L3 LINE CR1 -721 856 738 283 214 0 0 chr10 3858836 3858892 -136457873 - L2 LINE L2 -1 3312 3257 183 381 19 9 chr10 3858936 3859041 -136457724 - L3 LINE CR1 -989 588 483 782 267 37 31 chr10 3859069 3859391 -136457374 + MER5C DNA MER1_type 1 324 0 2085 115 44 0 chr10 3859447 3859743 -136457022 - AluSg SINE Alu -1 309 1 249 306 106 0 chr10 3859900 3859985 -136456780 + L2 LINE L2 3220 3313 0 3342 176 18 70 chr10 3861031 3861760 -136455005 + LTR8 LTR ERV1 1 691 0 2137 103 3 3 chr10 3862375 3862665 -136454100 - AluSc SINE Alu -19 290 1 397 35 0 221 chr10 3863445 3863531 -136453234 + MADE1 DNA Mariner 14 80 0 340 340 19 13 chr10 3863944 3864100 -136452665 - L2 LINE L2 -626 2688 2532 264 228 36 0 chr10 3864126 3864327 -136452438 + (TA)n Simple_repeat Simple_repeat 1 208 0 1751 167 37 0 chr10 3864338 3864638 -136452127 - AluSx SINE Alu -1 311 1 384 284 55 40 chr10 3864671 3864872 -136451893 - L2 LINE L2 -829 2485 2282 180 348 132 20 chr10 3865281 3865485 -136451280 - L2 LINE L2 -387 2927 2701 22 0 0 0 chr10 3865949 3865971 -136450794 + AT_rich Low_complexity Low_complexity 1 22 0 2096 115 18 0 chr10 3865978 3866264 -136450501 + AluSc SINE Alu 3 293 -16 229 300 108 33 chr10 3866771 3866891 -136449874 - MIR SINE MIR -74 188 60 25 0 0 0 chr10 3867768 3867793 -136448972 + AT_rich Low_complexity Low_complexity 1 25 0 341 210 25 76 chr10 3867928 3868047 -136448718 - Looper DNA T2_type -3 1555 1443 672 270 151 45 chr10 3868092 3868607 -136448158 + MLT1F1 LTR MaLR 1 565 -2 274 316 71 7 chr10 3868614 3868769 -136447996 - L1ME1 LINE L1 -4 6162 5998 1754 266 48 27 chr10 3868778 3869405 -136447360 - Looper DNA T2_type -782 776 137 442 204 79 130 chr10 3869402 3869474 -136447291 - Looper DNA T2_type -1343 215 141 * 1638 198 3 3 chr10 3869474 3869767 -136446998 - AluJb SINE Alu -19 293 1 442 204 79 130 chr10 3869767 3869910 -136446855 - Looper DNA T2_type -1417 141 11 1814 116 31 48 chr10 3870574 3870866 -136445899 + AluSx SINE Alu 8 294 -18 2368 78 7 0 chr10 3870866 3871162 -136445603 + AluY SINE Alu 1 298 -13 23 0 0 0 chr10 3871638 3871661 -136445104 + AT_rich Low_complexity Low_complexity 1 23 0 2249 90 13 13 chr10 3873105 3873416 -136443349 - AluSx SINE Alu -1 311 1 202 360 23 0 chr10 3874078 3874164 -136442601 + L3 LINE CR1 1073 1160 -417 396 169 0 0 chr10 3874395 3874460 -136442305 - MER46A DNA MER2_type -2 234 170 1135 158 0 6 chr10 3874568 3874745 -136442020 - MER46A DNA MER2_type -60 176 1 501 248 4 88 chr10 3874856 3875082 -136441683 - MIR SINE MIR -11 251 45 671 263 101 59 chr10 3875567 3876065 -136440700 + L2 LINE L2 2790 3305 -8 397 178 14 14 chr10 3876149 3876222 -136440543 + MER63 DNA MER1_type 661 733 -328 1014 160 0 0 chr10 3876383 3876560 -136440205 + AluSg/x SINE Alu 135 311 0 304 349 47 0 chr10 3876620 3876769 -136439996 - MIR SINE MIR -49 213 58 554 329 18 9 chr10 3877003 3877231 -136439534 + MIR SINE MIR 33 262 0 277 258 21 75 chr10 3877627 3877720 -136439045 - MIR SINE MIR -102 160 73 318 26 0 0 chr10 3877935 3877974 -136438791 + (TAA)n Simple_repeat Simple_repeat 1 39 0 2196 112 0 0 chr10 3877980 3878267 -136438498 + AluSq SINE Alu 1 287 -26 4690 204 29 19 chr10 3878275 3879796 -136436969 - L1MA9 LINE L1 -28 6284 4747 1506 166 48 37 chr10 3879796 3880091 -136436674 - AluJb SINE Alu -14 298 1 4690 204 29 19 chr10 3880091 3880142 -136436623 - L1MA9 LINE L1 -1565 4747 4698 2095 130 0 0 chr10 3881853 3882145 -136434620 - AluSx SINE Alu -18 294 3 22 0 0 0 chr10 3882149 3882171 -136434594 + AT_rich Low_complexity Low_complexity 1 22 0 1962 146 0 22 chr10 3882428 3882744 -136434021 + AluSp SINE Alu 1 309 -4 228 269 26 39 chr10 3883665 3883743 -136433022 - MLT1F1-int LTR MaLR -508 863 787 420 309 34 11 chr10 3884140 3884318 -136432447 - MLT1F1-int LTR MaLR -882 489 308 1216 277 136 14 chr10 3884472 3884973 -136431792 - MLT1F1 LTR MaLR -5 562 1 184 292 62 15 chr10 3885455 3885520 -136431245 + L2 LINE L2 3208 3275 -38 1350 180 30 26 chr10 3886458 3886725 -136430040 - MLT1B LTR MaLR -122 268 1 2034 151 0 0 chr10 3887113 3887412 -136429353 - AluSx SINE Alu -12 300 2 839 113 48 0 chr10 3888130 3888254 -136428511 + AluSq/x SINE Alu 4 133 -180 204 97 0 0 chr10 3888257 3888288 -136428477 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 262 414 9 0 chr10 3889172 3889288 -136427477 + L2 LINE L2 3151 3267 -5 2343 100 0 0 chr10 3889323 3889623 -136427142 - AluSx SINE Alu -12 300 1 239 114 0 0 chr10 3892135 3892170 -136424595 - MIR SINE MIR -109 153 119 901 207 98 37 chr10 3892193 3892439 -136424326 - MIR SINE MIR -1 261 1 21 0 0 0 chr10 3894320 3894341 -136422424 + AT_rich Low_complexity Low_complexity 1 21 0 707 219 0 0 chr10 3894341 3894455 -136422310 - FLAM_A SINE Alu -19 114 1 412 294 82 39 chr10 3894467 3894822 -136421943 + L1ME4a LINE L1 5567 5933 -188 255 61 0 0 chr10 3894982 3895015 -136421750 + (TA)n Simple_repeat Simple_repeat 2 34 0 273 333 12 0 chr10 3895172 3895256 -136421509 - MIR SINE MIR -137 125 41 1724 132 81 31 chr10 3895762 3896119 -136420646 - THE1C LTR MaLR 0 375 1 491 298 103 86 chr10 3896572 3897085 -136419680 + L1MEd LINE L1 338 859 -5260 40 37 0 0 chr10 3897106 3897160 -136419605 + AT_rich Low_complexity Low_complexity 1 54 0 242 213 16 47 chr10 3897162 3897289 -136419476 + (TTA)n Simple_repeat Simple_repeat 3 125 0 2263 112 0 10 chr10 3897434 3897737 -136419028 - AluSc SINE Alu -9 300 1 585 313 160 22 chr10 3897737 3898293 -136418472 + L1MEd LINE L1 933 1565 -4745 265 321 21 7 chr10 3899090 3899230 -136417535 + L1MEd LINE L1 2126 2267 -3862 464 290 81 45 chr10 3899319 3899540 -136417225 + L1MEd LINE L1 2274 2502 -3627 251 349 116 0 chr10 3899586 3899758 -136417007 + MIR SINE MIR 71 262 0 2196 136 0 0 chr10 3901010 3901318 -136415447 + AluSx SINE Alu 1 308 -4 434 187 19 65 chr10 3901504 3901611 -136415154 - MER5B DNA MER1_type -74 104 3 29 78 0 0 chr10 3902597 3902661 -136414104 + AT_rich Low_complexity Low_complexity 1 64 0 22 0 0 0 chr10 3902717 3902739 -136414026 + AT_rich Low_complexity Low_complexity 1 22 0 332 365 58 58 chr10 3902782 3903177 -136413588 - L2 LINE L2 0 3313 2919 294 320 62 46 chr10 3905860 3906054 -136410711 + L2 LINE L2 3117 3313 0 22 0 0 0 chr10 3906097 3906119 -136410646 + AT_rich Low_complexity Low_complexity 1 22 0 29 78 0 0 chr10 3906175 3906239 -136410526 + AT_rich Low_complexity Low_complexity 1 64 0 306 132 38 0 chr10 3907226 3907279 -136409486 + MER5B DNA MER1_type 3 57 -121 594 251 0 6 chr10 3907703 3907870 -136408895 - MER104 DNA Tc2 -1 179 14 200 371 80 25 chr10 3908265 3908502 -136408263 + L2 LINE L2 1792 2041 -1273 594 179 32 49 chr10 3909897 3910020 -136406745 - FLAM_C SINE Alu -19 124 4 370 265 160 6 chr10 3910858 3911039 -136405726 + L2 LINE L2 3102 3310 -3 23 0 0 0 chr10 3911177 3911200 -136405565 + AT_rich Low_complexity Low_complexity 1 23 0 2226 317 84 34 chr10 3911690 3913065 -136403700 - L2 LINE L2 -811 2503 1059 262 254 82 9 chr10 3913068 3913178 -136403587 + HAL1 LINE L1 839 956 -1551 203 374 61 0 chr10 3913645 3913744 -136403021 + L2 LINE L2 3106 3210 -62 805 263 33 37 chr10 3913761 3914085 -136402680 + L1ME LINE L1 4960 5281 -883 1440 201 0 42 chr10 3914085 3914393 -136402372 - AluJo SINE Alu -17 295 1 805 263 33 37 chr10 3914393 3914577 -136402188 + L1ME LINE L1 5281 5464 -700 764 124 0 148 chr10 3915227 3915437 -136401328 - AluSq SINE Alu -134 179 1 447 371 35 22 chr10 3915488 3915717 -136401048 - MIR SINE MIR -12 250 19 988 200 5 19 chr10 3917137 3917347 -136399418 - Tigger5 DNA MER2_type -63 2260 2054 1791 119 10 34 chr10 3917449 3917744 -136399021 - AluSq SINE Alu -3 310 23 1273 178 57 0 chr10 3917746 3917993 -136398772 + Tigger5 DNA MER2_type 2063 2323 0 239 240 13 0 chr10 3918001 3918076 -136398689 + (TAGA)n Simple_repeat Simple_repeat 1 76 0 1640 184 35 6 chr10 3918133 3918476 -136398289 - MSTA LTR MaLR 0 428 76 228 79 26 0 chr10 3918476 3918514 -136398251 - MSTB LTR MaLR -314 114 76 323 88 18 0 chr10 3918624 3918681 -136398084 - MSTB LTR MaLR -310 118 61 * 549 150 20 0 chr10 3918672 3918772 -136397993 - MSTB LTR MaLR -324 102 1 24 53 0 0 chr10 3919524 3919562 -136397203 + AT_rich Low_complexity Low_complexity 1 38 0 2089 88 3 52 chr10 3920590 3920896 -136395869 + AluSp SINE Alu 1 291 -22 1022 163 113 0 chr10 3921454 3921675 -136395090 + L1PA16 LINE L1 5921 6166 0 331 291 10 0 chr10 3922225 3922328 -136394437 + (TA)n Simple_repeat Simple_repeat 1 104 0 206 379 129 9 chr10 3922677 3922793 -136393972 + L2 LINE L2 3142 3271 -1 275 365 139 21 chr10 3922932 3923220 -136393545 + L3 LINE CR1 1160 1481 -96 2207 113 7 0 chr10 3923226 3923518 -136393247 + AluSx SINE Alu 1 294 -18 289 325 60 17 chr10 3924160 3924277 -136392488 - L2 LINE L2 0 3313 3192 1506 201 34 17 chr10 3924281 3924684 -136392081 + L1MB3 LINE L1 5271 5670 -513 743 178 20 7 chr10 3924687 3924833 -136391932 + FRAM SINE Alu 1 145 -31 1831 206 91 2 chr10 3924856 3925328 -136391437 + L1MB3 LINE L1 5662 6175 -8 270 271 98 57 chr10 3925446 3925568 -136391197 - L2 LINE L2 -243 3029 2903 1039 128 137 0 chr10 3926379 3926583 -136390182 + L1M2 LINE L1 5558 5789 -502 232 203 0 17 chr10 3927363 3927422 -136389343 + (TA)n Simple_repeat Simple_repeat 1 58 0 186 43 0 0 chr10 3927449 3927461 -136389304 + (CA)n Simple_repeat Simple_repeat 1 35 0 186 43 0 0 chr10 3927461 3927484 -136389281 + (CA)n Simple_repeat Simple_repeat 2 24 0 210 143 0 0 chr10 3927551 3927586 -136389179 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 747 269 12 64 chr10 3928140 3928389 -136388376 + L2 LINE L2 3078 3313 0 2317 113 0 0 chr10 3929892 3930202 -136386563 - AluSx SINE Alu 0 312 3 206 118 0 0 chr10 3930336 3930370 -136386395 + (A)n Simple_repeat Simple_repeat 1 34 0 296 297 80 14 chr10 3930393 3930531 -136386234 + MIR SINE MIR 82 228 -34 362 332 98 4 chr10 3931184 3931458 -136385307 + HsTC2 DNA Tc2 578 877 -1021 2168 109 0 0 chr10 3931635 3931972 -136384793 - AluSq SINE Alu 0 337 1 208 246 53 0 chr10 3934207 3934264 -136382501 + MIR SINE MIR 108 167 -95 264 250 50 70 chr10 3934285 3934385 -136382380 + L2 LINE L2 3211 3308 -5 238 337 10 40 chr10 3934819 3934920 -136381845 + L2 LINE L2 3150 3247 -25 2009 128 59 9 chr10 3935584 3935905 -136380860 - MER1B DNA MER1_type 0 337 1 2099 100 4 0 chr10 3936945 3937258 -136379507 + AluSg SINE Alu 1 314 0 477 312 69 26 chr10 3938734 3938923 -136377842 + MIR SINE MIR 2 198 -64 1433 228 39 15 chr10 3939223 3939561 -136377204 - MSTD LTR MaLR -50 346 1 1459 129 133 33 chr10 3940311 3940582 -136376183 - AluSg SINE Alu -12 298 1 1940 162 0 0 chr10 3941355 3941657 -136375108 + AluSx SINE Alu 6 307 -5 221 371 0 53 chr10 3942896 3943028 -136373737 - MIR3 SINE MIR -10 198 74 2117 98 7 30 chr10 3943655 3943960 -136372805 - AluSg SINE Alu -1 309 12 241 231 19 0 chr10 3944593 3944645 -136372120 + CT-rich Low_complexity Low_complexity 1 53 0 240 145 26 26 chr10 3944651 3944727 -136372038 + (TCTA)n Simple_repeat Simple_repeat 1 76 0 2417 65 0 3 chr10 3946609 3946903 -136369862 - AluY SINE Alu -18 293 1 2238 122 0 0 chr10 3947419 3947715 -136369050 + AluSx SINE Alu 1 296 -16 353 320 113 34 chr10 3950223 3950638 -136366127 + L1MEd LINE L1 440 887 -5232 22 0 0 0 chr10 3950960 3950982 -136365783 + AT_rich Low_complexity Low_complexity 1 22 0 205 209 47 35 chr10 3951059 3951139 -136365626 + (TA)n Simple_repeat Simple_repeat 1 82 0 1938 151 176 14 chr10 3951139 3951503 -136365262 + MSTA LTR MaLR 5 427 -1 287 308 92 64 chr10 3951508 3951834 -136364931 + L1MB5 LINE L1 5323 5660 -461 201 263 0 0 chr10 3952203 3952260 -136364505 + A-rich Low_complexity Low_complexity 1 57 0 838 259 39 104 chr10 3952719 3953247 -136363518 + L1ME3A LINE L1 5288 5772 -398 1857 120 8 0 chr10 3953247 3953506 -136363259 - AluSx SINE Alu -51 261 1 838 259 39 104 chr10 3953506 3953591 -136363174 + L1ME3A LINE L1 5772 5861 -309 2180 99 3 3 chr10 3953913 3954229 -136362536 - AluSx SINE Alu 0 316 1 1360 216 17 3 chr10 3954326 3954613 -136362152 + L1MB5 LINE L1 5884 6174 0 357 24 0 0 chr10 3955025 3955067 -136361698 + (CA)n Simple_repeat Simple_repeat 2 43 0 203 235 0 15 chr10 3955098 3955166 -136361599 + (CATATA)n Simple_repeat Simple_repeat 2 68 0 288 274 0 24 chr10 3955167 3955251 -136361514 + L1MC4 LINE L1 6614 6695 -1347 1040 115 7 7 chr10 3955865 3956013 -136360752 + AluSq/x SINE Alu 1 148 -165 294 234 16 0 chr10 3956165 3956229 -136360536 - AluJ/FLAM SINE Alu -237 65 1 21 36 0 0 chr10 3956233 3956261 -136360504 + AT_rich Low_complexity Low_complexity 1 28 0 1186 225 58 36 chr10 3956346 3956675 -136360090 + MLT1A2 LTR MaLR 21 356 -18 344 268 71 9 chr10 3956861 3956973 -136359792 + MER69 DNA AcHobo 240 358 -868 1729 240 63 58 chr10 3957380 3958370 -136358395 + MER69 DNA AcHobo 1451 2448 -78 1945 147 3 3 chr10 3958370 3958663 -136358102 - AluSx SINE Alu -19 293 1 1729 240 63 58 chr10 3958663 3958733 -136358032 + MER69 DNA AcHobo 2448 2516 -10 1511 240 170 23 chr10 3959879 3960707 -136356058 + Charlie2 DNA MER1_type 1870 2819 -43 1984 134 14 0 chr10 3961078 3961399 -136355366 - AluSx SINE Alu 0 325 1 198 71 0 0 chr10 3961442 3961470 -136355295 + (CA)n Simple_repeat Simple_repeat 2 29 0 382 335 29 50 chr10 3964029 3964271 -136352494 + MIR SINE MIR 9 245 -17 1779 132 50 21 chr10 3964693 3964974 -136351791 + AluSx SINE Alu 1 289 -23 255 173 0 0 chr10 3966079 3966131 -136350634 - LTR66 LTR ERVL -155 455 404 453 141 0 0 chr10 3966134 3966207 -136350558 + (TA)n Simple_repeat Simple_repeat 1 74 0 273 57 0 0 chr10 3966207 3966242 -136350523 + (CA)n Simple_repeat Simple_repeat 2 36 0 2057 112 11 0 chr10 3966246 3966532 -136350233 - AluSq SINE Alu -24 289 1 26 50 0 0 chr10 3967122 3967162 -136349603 + AT_rich Low_complexity Low_complexity 1 40 0 2380 56 0 11 chr10 3971258 3971602 -136345163 - AluY SINE Alu 0 341 1 310 255 113 0 chr10 3972910 3973016 -136343749 + MIR3 SINE MIR 91 208 0 25 51 0 0 chr10 3973605 3973644 -136343121 + AT_rich Low_complexity Low_complexity 1 39 0 1934 152 40 0 chr10 3974352 3974648 -136342117 - AluSx SINE Alu -4 308 1 1983 174 33 12 chr10 3975997 3976558 -136340207 + L1P5 LINE L1 4977 5555 -601 221 0 0 33 chr10 3976870 3976900 -136339865 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2119 92 20 31 chr10 3976903 3977196 -136339569 - AluSq SINE Alu -23 290 1 1213 195 77 49 chr10 3977472 3977759 -136339006 + AluJb SINE Alu 17 311 -1 1042 83 0 0 chr10 3978099 3978231 -136338534 + AluSp/q SINE Alu 162 293 -20 189 217 19 38 chr10 3978382 3978539 -136338226 + (TA)n Simple_repeat Simple_repeat 2 155 0 700 255 45 25 chr10 3978579 3978779 -136337986 - MER20 DNA MER1_type 0 219 16 248 320 13 0 chr10 3980036 3980111 -136336654 - L2 LINE L2 -376 2938 2863 1792 213 11 8 chr10 3980838 3981200 -136335565 - MLT1A1 LTR MaLR -1 364 2 2099 139 7 0 chr10 3981368 3981678 -136335087 - AluSx SINE Alu 0 312 1 21 36 0 0 chr10 3981916 3981944 -136334821 + AT_rich Low_complexity Low_complexity 1 28 0 296 127 18 0 chr10 3983934 3983989 -136332776 + GA-rich Low_complexity Low_complexity 4 59 0 248 233 0 42 chr10 3984058 3984178 -136332587 + GA-rich Low_complexity Low_complexity 3 117 0 * 514 206 5 33 chr10 3984151 3984335 -136332430 + G-rich Low_complexity Low_complexity 1 179 0 468 145 15 30 chr10 3984372 3984503 -136332262 + GA-rich Low_complexity Low_complexity 4 132 0 495 279 65 30 chr10 3984973 3985174 -136331591 - MER3 DNA MER1_type 0 209 2 189 0 0 0 chr10 3986546 3986567 -136330198 + (CTA)n Simple_repeat Simple_repeat 1 21 0 2137 122 0 3 chr10 3986579 3986882 -136329883 + AluSx SINE Alu 1 302 -10 783 153 0 0 chr10 3986888 3987006 -136329759 + FLAM_C SINE Alu 1 118 -15 180 158 0 0 chr10 3987615 3987653 -136329112 + (CA)n Simple_repeat Simple_repeat 1 38 0 1967 123 36 10 chr10 3987814 3988115 -136328650 + AluSg SINE Alu 1 309 -1 302 303 48 35 chr10 3988175 3988320 -136328445 + MIR SINE MIR 50 196 -66 750 273 86 51 chr10 3988572 3989000 -136327765 - MLT1J1 LTR MaLR 0 446 4 205 308 110 11 chr10 3989095 3989186 -136327579 + MIR SINE MIR 100 199 -63 214 294 119 40 chr10 3989304 3989430 -136327335 + MIR SINE MIR 8 143 -119 2309 117 0 0 chr10 3990700 3991008 -136325757 + AluSc SINE Alu 1 308 -1 200 282 111 60 chr10 3992104 3992221 -136324544 - MIR SINE MIR -120 142 20 228 285 76 83 chr10 3993309 3993453 -136323312 - MIR SINE MIR -39 223 81 395 220 37 37 chr10 3993984 3994093 -136322672 - Charlie8 DNA MER1_type -2247 170 62 579 211 0 0 chr10 3995199 3995313 -136321452 - L1MA5A LINE L1 -5 6292 6179 912 111 0 15 chr10 3996312 3996447 -136320318 + AluSq/x SINE Alu 1 133 -179 23 0 0 0 chr10 3997389 3997412 -136319353 + AT_rich Low_complexity Low_complexity 1 23 0 860 268 7 48 chr10 3997528 3997819 -136318946 + L1M4 LINE L1 4047 4325 -1821 1182 102 0 0 chr10 3997822 3997969 -136318796 + AluSq/x SINE Alu 6 152 -161 459 0 0 0 chr10 3997971 3998022 -136318743 + (TA)n Simple_repeat Simple_repeat 1 51 0 2575 226 32 26 chr10 3998036 3998677 -136318088 + L1M4 LINE L1 4318 4966 -1180 1605 113 13 17 chr10 3998677 3998784 -136317981 - MER30 DNA MER1_type 0 230 124 2372 87 0 0 chr10 3998784 3999082 -136317683 + AluSg SINE Alu 1 298 -12 1605 113 13 17 chr10 3999082 3999205 -136317560 - MER30 DNA MER1_type -106 124 1 2575 226 32 26 chr10 3999205 3999306 -136317459 + L1M4 LINE L1 4966 5065 -1081 2036 148 0 0 chr10 3999902 4000200 -136316565 + AluSx SINE Alu 1 298 -14 26 30 0 0 chr10 4000833 4000866 -136315899 + AT_rich Low_complexity Low_complexity 1 33 0 2927 63 0 0 chr10 4002066 4002413 -136314352 + L1PA8 LINE L1 5822 6168 -4 1607 154 91 58 chr10 4002779 4003142 -136313623 - THE1C LTR MaLR 0 375 1 349 207 27 0 chr10 4005018 4005129 -136311636 + G-rich Low_complexity Low_complexity 2 115 0 180 298 99 25 chr10 4005637 4005758 -136311007 + L2 LINE L2 2986 3115 -157 1541 205 7 4 chr10 4007987 4008285 -136308480 - AluJb SINE Alu 0 301 3 21 0 0 0 chr10 4008412 4008433 -136308332 + AT_rich Low_complexity Low_complexity 1 21 0 849 147 6 51 chr10 4008622 4008754 -136308011 - L1PA16 LINE L1 0 6166 6040 1546 203 7 3 chr10 4008754 4009055 -136307710 - AluJo SINE Alu -10 302 1 849 147 6 51 chr10 4009055 4009078 -136307687 - L1PA16 LINE L1 -126 6040 6018 217 339 46 39 chr10 4009078 4009208 -136307557 - MIR3 SINE MIR -65 143 13 2103 120 3 0 chr10 4009208 4009500 -136307265 - AluSx SINE Alu -19 293 1 1022 51 17 34 chr10 4009684 4009859 -136306906 + (TTTC)n Simple_repeat Simple_repeat 2 173 0 1717 151 7 11 chr10 4009861 4010140 -136306625 - AluJb SINE Alu -34 278 1 199 227 89 0 chr10 4010240 4010279 -136306486 + MIR SINE MIR 106 115 -93 392 0 21 0 chr10 4010279 4010327 -136306438 + (TAA)n Simple_repeat Simple_repeat 2 50 0 199 227 89 0 chr10 4010327 4010364 -136306401 + MIR SINE MIR 115 147 -61 213 304 163 11 chr10 4010488 4010580 -136306185 - L2 LINE L2 -12 3301 3196 2020 116 3 27 chr10 4010776 4011077 -136305688 + AluSx SINE Alu 1 294 -18 24 0 0 0 chr10 4011083 4011107 -136305658 + AT_rich Low_complexity Low_complexity 1 24 0 237 218 135 113 chr10 4011107 4011240 -136305525 - L2 LINE L2 -452 2862 2727 2104 121 7 3 chr10 4011747 4012044 -136304721 + AluSg SINE Alu 1 298 -12 1559 251 70 13 chr10 4012075 4012605 -136304160 - MER69 DNA AcHobo -8 2518 1959 950 221 43 59 chr10 4012597 4012791 -136303974 - MER69 DNA AcHobo -753 1773 1584 * 1645 164 27 17 chr10 4012791 4013090 -136303675 - AluJo SINE Alu -10 302 1 950 221 43 59 chr10 4013090 4013217 -136303548 - MER69 DNA AcHobo -942 1584 1457 277 214 101 22 chr10 4013279 4013368 -136303397 - MER69 DNA AcHobo -1032 194 99 2051 134 0 3 chr10 4013578 4013883 -136302882 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr10 4013886 4013907 -136302858 + AT_rich Low_complexity Low_complexity 1 21 0 2318 105 0 6 chr10 4014667 4014982 -136301783 - AluSq SINE Alu 0 313 1 1820 157 13 13 chr10 4017375 4017681 -136299084 - AluSx SINE Alu -6 306 1 268 316 69 69 chr10 4017816 4017990 -136298775 + MIR SINE MIR 39 212 -50 4311 126 21 11 chr10 4018171 4018800 -136297965 - MER41B LTR ERV1 0 635 1 423 282 8 8 chr10 4019006 4019123 -136297642 - Charlie8 DNA MER1_type -2208 209 93 1699 138 18 90 chr10 4020318 4020470 -136296295 + AluJo SINE Alu 3 120 -192 2176 120 0 7 chr10 4020470 4020778 -136295987 + AluSg SINE Alu 1 306 -4 1699 138 18 90 chr10 4020778 4020959 -136295806 + AluJo SINE Alu 120 312 0 1776 148 24 10 chr10 4021772 4022069 -136294696 - AluSx SINE Alu -11 301 1 504 0 0 0 chr10 4023374 4023430 -136293335 + (TAA)n Simple_repeat Simple_repeat 2 57 0 2070 120 23 3 chr10 4024455 4024754 -136292011 - AluSx SINE Alu -7 305 1 2119 136 7 3 chr10 4025714 4026024 -136290741 + AluSq SINE Alu 1 311 -2 693 241 282 19 chr10 4026244 4026758 -136290007 + LTR50 LTR ERVL 137 785 -10 2712 113 8 3 chr10 4027030 4027392 -136289373 + THE1B LTR MaLR 1 364 0 466 333 34 19 chr10 4027442 4027706 -136289059 + LTR16A LTR ERVL 104 371 -79 2903 169 62 108 chr10 4027911 4028460 -136288305 + LTR8A LTR ERV1 2 508 -219 1988 149 10 3 chr10 4028460 4028768 -136287997 + AluSx SINE Alu 1 310 -2 2903 169 62 108 chr10 4028768 4028979 -136287786 + LTR8A LTR ERV1 508 727 0 1266 256 49 23 chr10 4029361 4029708 -136287057 + MLT1A2 LTR MaLR 1 356 -18 393 301 127 28 chr10 4030035 4030248 -136286517 - MIR SINE MIR 0 262 29 644 254 0 7 chr10 4030799 4030941 -136285824 + MER8 DNA MER2_type 99 239 0 2270 115 0 3 chr10 4031021 4031389 -136285376 - AluSx SINE Alu 0 369 3 329 277 84 34 chr10 4031724 4031843 -136284922 - MIR SINE MIR -1 261 137 2068 135 7 0 chr10 4032802 4033105 -136283660 + AluSx SINE Alu 1 305 -7 238 309 178 13 chr10 4033255 4033407 -136283358 + MER5A DNA MER1_type 13 189 0 439 305 32 13 chr10 4033928 4034082 -136282683 - MIR SINE MIR -85 177 21 2091 143 0 0 chr10 4034638 4034939 -136281826 + AluSp SINE Alu 1 301 -12 1139 132 11 0 chr10 4034939 4035113 -136281652 + AluSq SINE Alu 134 309 -4 608 264 22 0 chr10 4037460 4037638 -136279127 + MER45 DNA AcHobo 3 184 -856 754 202 47 114 chr10 4037792 4038089 -136278676 - MLT1A2 LTR MaLR -74 300 24 398 274 122 16 chr10 4038177 4038498 -136278267 + L1ME4a LINE L1 5764 6118 -3 233 291 254 8 chr10 4038956 4039090 -136277675 + MIR3 SINE MIR 37 203 -5 2154 142 0 0 chr10 4039119 4039422 -136277343 - AluSx SINE Alu -9 303 1 23 0 0 0 chr10 4039594 4039617 -136277148 + AT_rich Low_complexity Low_complexity 1 23 0 1257 176 118 123 chr10 4039654 4040070 -136276695 + MLT2D LTR ERVL 1 414 0 569 184 18 28 chr10 4041072 4041181 -136275584 + AluJo SINE Alu 2 109 -203 990 149 54 0 chr10 4041268 4041436 -136275329 + AluJo SINE Alu 110 286 -26 541 332 25 20 chr10 4041800 4042002 -136274763 + MIR SINE MIR 12 214 -48 243 273 87 40 chr10 4042122 4042272 -136274493 - MIR SINE MIR -4 258 102 340 295 0 27 chr10 4043494 4043606 -136273159 - MIR SINE MIR -2 260 152 2196 109 0 20 chr10 4044588 4044891 -136271874 - AluSg SINE Alu -13 297 1 4113 156 13 15 chr10 4044953 4045639 -136271126 - L1MA6 LINE L1 0 6300 5616 1828 71 8 4 chr10 4045764 4046003 -136270762 - AluY SINE Alu -16 295 56 582 296 90 31 chr10 4046294 4046649 -136270116 - L1ME4a LINE L1 -238 5883 5508 1216 243 114 39 chr10 4046965 4047422 -136269343 + MLT2B1 LTR ERVL 20 510 -10 201 39 0 0 chr10 4047820 4047846 -136268919 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 2162 153 23 8 chr10 4050999 4051353 -136265412 - THE1B LTR MaLR -1 363 5 244 295 121 76 chr10 4051906 4052354 -136264411 - L2 LINE L2 0 3313 2846 237 263 152 0 chr10 4052406 4052505 -136264260 + L2 LINE L2 2671 2784 -530 221 306 126 53 chr10 4052541 4052842 -136263923 + L2 LINE L2 2991 3313 0 1227 316 93 51 chr10 4052877 4053626 -136263139 - L2 LINE L2 -683 2631 1851 252 299 95 7 chr10 4054103 4054240 -136262525 + L1ME LINE L1 5514 5662 -502 528 313 83 25 chr10 4055129 4055407 -136261358 + HAL1 LINE L1 793 1086 -1421 275 224 59 0 chr10 4055462 4055547 -136261218 - L1MC2 LINE L1 -9 6335 6246 2371 63 10 20 chr10 4055610 4055911 -136260854 + AluY SINE Alu 5 302 -9 1272 242 72 14 chr10 4056017 4056529 -136260236 + L1M4 LINE L1 2965 3506 -2640 4422 206 154 57 chr10 4056554 4056611 -136260154 - L1MCa LINE L1 -4489 1937 1887 1635 166 7 18 chr10 4056611 4056888 -136259877 - AluJo SINE Alu 0 312 39 4422 206 154 57 chr10 4056888 4058563 -136258202 - L1MCa LINE L1 -4539 1887 37 479 282 136 84 chr10 4058624 4059138 -136257627 + HAL1 LINE L1 1088 1628 -879 180 176 0 0 chr10 4059637 4059671 -136257094 + GA-rich Low_complexity Low_complexity 3 36 0 674 178 18 6 chr10 4059684 4059853 -136256912 + GA-rich Low_complexity Low_complexity 1 171 0 661 184 21 16 chr10 4059868 4060300 -136256465 + GA-rich Low_complexity Low_complexity 1 434 0 387 0 0 0 chr10 4061338 4061381 -136255384 + (TA)n Simple_repeat Simple_repeat 2 44 0 183 42 0 0 chr10 4061381 4061405 -136255360 + (TG)n Simple_repeat Simple_repeat 2 25 0 2222 126 0 3 chr10 4062467 4062777 -136253988 + AluSx SINE Alu 1 309 -3 190 273 13 39 chr10 4063081 4063158 -136253607 + MIR SINE MIR 62 136 -126 2012 137 3 0 chr10 4063577 4063862 -136252903 - AluSx SINE Alu -26 286 1 4254 174 24 1 chr10 4064916 4065721 -136251044 + Tigger1 DNA MER2_type 1 823 -1595 3127 135 107 0 chr10 4065724 4066293 -136250472 + Tigger1 DNA MER2_type 1789 2418 0 2491 58 0 13 chr10 4066579 4066887 -136249878 + AluY SINE Alu 1 304 -7 347 272 46 48 chr10 4067187 4067515 -136249250 - MLT1G LTR MaLR -252 343 17 2084 115 0 11 chr10 4067710 4068034 -136248731 + AluSx SINE Alu 1 321 0 2213 185 85 39 chr10 4068284 4068792 -136247973 + LTR26B LTR ERV1 1 531 0 408 169 159 104 chr10 4068872 4069048 -136247717 + MLT1E1 LTR MaLR 1 191 -433 4505 104 1 65 chr10 4069048 4069609 -136247156 - LTR8 LTR ERV1 0 691 187 1976 121 32 4 chr10 4069609 4069889 -136246876 + AluSx SINE Alu 1 288 -24 4505 104 1 65 chr10 4069889 4070065 -136246700 - LTR8 LTR ERV1 -504 187 1 408 169 159 104 chr10 4070065 4070089 -136246676 + MLT1E1 LTR MaLR 191 212 -412 1560 201 64 54 chr10 4070908 4071126 -136245639 - LTR54 LTR ERV1 -3 507 293 3143 128 91 0 chr10 4071126 4071634 -136245131 + MER41C LTR ERV1 1 554 0 1560 201 64 54 chr10 4071634 4071917 -136244848 - LTR54 LTR ERV1 -217 293 1 2576 187 60 11 chr10 4072775 4073341 -136243424 + LTR51 LTR ERV1 1 594 -77 243 0 0 0 chr10 4074226 4074253 -136242512 + (A)n Simple_repeat Simple_repeat 1 27 0 320 226 15 22 chr10 4074454 4074591 -136242174 + (CA)n Simple_repeat Simple_repeat 1 136 0 23 0 0 0 chr10 4076039 4076062 -136240703 + AT_rich Low_complexity Low_complexity 1 23 0 403 274 101 58 chr10 4076200 4076477 -136240288 - L2 LINE L2 -3 3310 3022 526 189 18 0 chr10 4076501 4076612 -136240153 + MSTC LTR MaLR 316 428 0 272 143 0 0 chr10 4076674 4076716 -136240049 - 5S rRNA rRNA -79 42 1 2288 318 88 32 chr10 4076731 4078156 -136238609 - L2 LINE L2 -749 2565 1062 264 257 80 9 chr10 4078158 4078271 -136238494 + HAL1 LINE L1 836 956 -1551 203 374 61 0 chr10 4078738 4078837 -136237928 + L2 LINE L2 3106 3210 -62 832 287 43 30 chr10 4078854 4079178 -136237587 + L1ME3A LINE L1 4960 5278 -884 1475 202 0 39 chr10 4079178 4079485 -136237280 - AluJo SINE Alu -17 295 1 832 287 43 30 chr10 4079485 4079977 -136236788 + L1ME3A LINE L1 5278 5789 -373 500 230 49 75 chr10 4080010 4080236 -136236529 + L1ME3A LINE L1 5942 6161 -9 27 0 0 0 chr10 4080881 4080908 -136235857 + AT_rich Low_complexity Low_complexity 1 27 0 190 269 239 0 chr10 4081387 4081454 -136235311 - L3b LINE CR1 -71 1512 1430 3150 67 24 40 chr10 4081999 4082450 -136234315 + MLT2A1 LTR ERVL 1 444 0 1294 250 118 34 chr10 4082557 4082975 -136233790 - L1MCc LINE L1 -4889 1534 1188 1272 211 157 59 chr10 4082975 4083486 -136233279 - MER34B LTR ERV1 0 565 5 1294 250 118 34 chr10 4083486 4083928 -136232837 - L1MCc LINE L1 -5235 1188 784 838 243 57 24 chr10 4084183 4084553 -136232212 - L1MCc LINE L1 -6025 398 17 280 283 130 22 chr10 4084872 4085102 -136231663 - L1M2 LINE L1 -744 5556 5302 201 39 0 0 chr10 4085243 4085269 -136231496 + (T)n Simple_repeat Simple_repeat 1 26 0 339 326 22 17 chr10 4085630 4085660 -136231105 - L1M4 LINE L1 -1089 5057 5029 1824 108 93 0 chr10 4085660 4085929 -136230836 - AluSx SINE Alu -18 294 1 339 326 22 17 chr10 4085929 4086076 -136230689 - L1M4 LINE L1 -1117 5029 4879 843 323 87 40 chr10 4086097 4086958 -136229807 - L1M4 LINE L1 -1331 4815 3914 468 305 316 21 chr10 4087024 4087541 -136229224 + L2 LINE L2 1132 1495 -1819 2149 127 0 3 chr10 4087541 4087841 -136228924 - AluSx SINE Alu -13 299 1 468 305 316 21 chr10 4087841 4087906 -136228859 + L2 LINE L2 1495 1886 -1428 1280 261 177 50 chr10 4087920 4088747 -136228018 + L2 LINE L2 2140 3109 -204 2263 102 0 3 chr10 4088747 4089050 -136227715 - AluSx SINE Alu -10 302 1 1280 261 177 50 chr10 4089050 4089261 -136227504 + L2 LINE L2 3109 3292 -21 675 331 38 44 chr10 4089300 4089823 -136226942 - L1M4 LINE L1 -2375 3771 3252 1908 192 67 23 chr10 4089905 4090426 -136226339 + L1MB3 LINE L1 5636 6179 -4 300 279 84 45 chr10 4090635 4090789 -136225976 - L1M4 LINE L1 -3146 3000 2841 293 122 0 0 chr10 4090881 4090930 -136225835 - L1MA9 LINE L1 -38 6274 6226 2934 147 67 7 chr10 4091048 4091600 -136225165 - LTR1 LTR ERV1 0 785 201 229 302 0 73 chr10 4091668 4091860 -136224905 + (TCTCTG)n Simple_repeat Simple_repeat 2 179 0 1087 155 57 16 chr10 4091877 4092122 -136224643 - LTR1 LTR ERV1 -530 255 1 294 272 29 10 chr10 4092149 4092252 -136224513 - L1MA9 LINE L1 -164 6148 6044 25 51 0 0 chr10 4092373 4092412 -136224353 + AT_rich Low_complexity Low_complexity 1 39 0 33 25 0 0 chr10 4095137 4095177 -136221588 + AT_rich Low_complexity Low_complexity 1 40 0 2036 139 7 0 chr10 4095177 4095486 -136221279 - AluSx SINE Alu -1 311 1 2186 125 3 0 chr10 4095623 4095928 -136220837 + AluSg SINE Alu 1 306 -4 3492 251 54 4 chr10 4097300 4098300 -136218465 - L1M4 LINE L1 -1306 4840 3791 262 143 13 156 chr10 4098297 4098347 -136218418 + L1MCa LINE L1 1301 1338 -5088 * 1265 222 39 52 chr10 4098347 4098479 -136218286 + AluJo SINE Alu 1 133 -169 2371 89 0 3 chr10 4098479 4098805 -136217960 + AluSc SINE Alu 1 309 0 1265 222 39 52 chr10 4098805 4098978 -136217787 + AluJo SINE Alu 133 302 0 262 143 13 156 chr10 4098978 4099004 -136217761 + L1MCa LINE L1 1338 1366 -5060 828 201 29 29 chr10 4099027 4099231 -136217534 - L1MCa LINE L1 -6189 237 34 2033 125 7 3 chr10 4099270 4099559 -136217206 - AluSx SINE Alu -22 290 1 288 274 0 24 chr10 4100173 4100257 -136216508 - L1MC4 LINE L1 -1347 6695 6614 203 235 0 15 chr10 4100258 4100326 -136216439 + (TATATG)n Simple_repeat Simple_repeat 2 68 0 357 24 0 0 chr10 4100357 4100399 -136216366 + (TG)n Simple_repeat Simple_repeat 2 43 0 1360 216 17 3 chr10 4100811 4101098 -136215667 - L1MB5 LINE L1 0 6174 5884 2181 99 3 3 chr10 4101195 4101511 -136215254 + AluSx SINE Alu 1 316 0 838 259 39 104 chr10 4101832 4101917 -136214848 - L1ME3A LINE L1 -309 5861 5772 1857 120 8 0 chr10 4101917 4102176 -136214589 + AluSx SINE Alu 1 261 -51 838 259 39 104 chr10 4102176 4102704 -136214061 - L1ME3A LINE L1 -398 5772 5288 201 263 0 0 chr10 4103164 4103221 -136213544 + T-rich Low_complexity Low_complexity 1 57 0 287 322 80 52 chr10 4103590 4103916 -136212849 - L1MB5 LINE L1 -544 5618 5323 1938 151 176 14 chr10 4103921 4104285 -136212480 - MSTA LTR MaLR -1 427 5 205 209 47 35 chr10 4104285 4104365 -136212400 + (TA)n Simple_repeat Simple_repeat 1 81 0 22 0 0 0 chr10 4104442 4104464 -136212301 + AT_rich Low_complexity Low_complexity 1 22 0 353 320 113 34 chr10 4104786 4105201 -136211564 - L1MEd LINE L1 -5232 887 440 2238 122 0 0 chr10 4107709 4108005 -136208760 - AluSx SINE Alu -16 296 1 2417 65 0 3 chr10 4108521 4108815 -136207950 + AluY SINE Alu 1 293 -18 240 145 26 26 chr10 4110697 4110773 -136205992 + (TAGA)n Simple_repeat Simple_repeat 1 76 0 241 231 19 0 chr10 4110779 4110831 -136205934 + GA-rich Low_complexity Low_complexity 1 53 0 240 255 85 32 chr10 4110913 4111007 -136205758 + LTR67 LTR ERVL 457 555 -2 2209 81 7 30 chr10 4111464 4111761 -136205004 + AluSc SINE Alu 12 301 -8 212 253 84 12 chr10 4111765 4111848 -136204917 + MIR SINE MIR 150 238 -24 337 204 43 21 chr10 4111890 4111983 -136204782 + MLT1J LTR MaLR 105 199 -312 21 71 0 0 chr10 4113771 4113813 -136202952 + AT_rich Low_complexity Low_complexity 1 42 0 605 201 45 124 chr10 4113871 4114274 -136202491 - HAL1 LINE L1 -1313 1194 824 231 90 154 64 chr10 4114293 4114371 -136202394 - HAL1 LINE L1 -2273 234 150 5018 178 30 5 chr10 4114379 4114918 -136201847 + L1PB4 LINE L1 4621 5145 -1011 303 28 0 0 chr10 4114918 4114954 -136201811 + (TAA)n Simple_repeat Simple_repeat 2 37 0 5018 178 30 5 chr10 4114954 4115857 -136200908 + L1PB4 LINE L1 5145 6101 -55 601 192 26 40 chr10 4115856 4116007 -136200758 - L1MB5 LINE L1 -794 5352 5204 * 267 79 0 0 chr10 4116096 4116134 -136200631 + L1PB4 LINE L1 6112 6149 -7 1801 127 9 67 chr10 4116773 4117103 -136199662 + AluSx SINE Alu 1 311 -1 207 239 0 22 chr10 4117903 4117949 -136198816 - MIR SINE MIR -187 75 31 2254 112 0 0 chr10 4118663 4118958 -136197807 + AluSx SINE Alu 2 296 -16 498 331 0 11 chr10 4119274 4119452 -136197313 + (TG)n Simple_repeat Simple_repeat 1 176 0 262 279 0 44 chr10 4119477 4119660 -136197105 + (TATATG)n Simple_repeat Simple_repeat 3 177 0 1870 99 23 11 chr10 4121788 4122050 -136194715 + AluSg1 SINE Alu 39 303 -6 1433 231 140 7 chr10 4122494 4122900 -136193865 + MER65C LTR ERV1 1 460 -1 2035 164 55 33 chr10 4124876 4125419 -136191346 - MLT2A2 LTR ERVL -1 553 1 3415 130 2 2 chr10 4126590 4127081 -136189684 + L1PB1 LINE L1 5661 6151 0 25 31 0 0 chr10 4127336 4127368 -136189397 + AT_rich Low_complexity Low_complexity 1 32 0 1590 176 23 20 chr10 4128108 4128414 -136188351 - AluJb SINE Alu -5 307 1 210 269 298 0 chr10 4129750 4129854 -136186911 - L2 LINE L2 0 3272 3138 1660 130 30 15 chr10 4129992 4130261 -136186504 - L1PA13 LINE L1 -110 6053 5781 264 223 117 21 chr10 4130424 4130518 -136186247 - MER5A DNA MER1_type -83 106 4 243 0 0 0 chr10 4131090 4131117 -136185648 + (A)n Simple_repeat Simple_repeat 1 27 0 4504 124 19 5 chr10 4132058 4132705 -136184060 - L1PA13 LINE L1 0 6163 5508 190 255 85 106 chr10 4132855 4132949 -136183816 - MIR SINE MIR -100 108 17 304 250 35 132 chr10 4135903 4136131 -136180634 + L2 LINE L2 2291 2496 -818 1273 169 8 36 chr10 4136160 4136408 -136180357 - AluJo SINE Alu -32 280 40 704 141 0 0 chr10 4136408 4136507 -136180258 - AluJ/FLAM SINE Alu -211 101 3 210 296 14 0 chr10 4136508 4136579 -136180186 + L2 LINE L2 2776 2847 -467 1052 90 0 0 chr10 4137808 4137941 -136178824 + AluSq/x SINE Alu 1 133 -179 320 129 0 43 chr10 4137941 4137980 -136178785 + (A)n Simple_repeat Simple_repeat 1 37 -30 2035 137 0 9 chr10 4137980 4138295 -136178470 + AluSx SINE Alu 1 312 0 320 129 0 43 chr10 4138295 4138325 -136178440 + (A)n Simple_repeat Simple_repeat 37 67 0 291 317 34 46 chr10 4138868 4139053 -136177712 + MIR3 SINE MIR 17 198 -10 273 329 14 28 chr10 4140517 4140660 -136176105 - L2 LINE L2 -213 3059 2919 516 134 12 0 chr10 4141282 4141387 -136175378 - AluSc SINE Alu 0 311 206 41 98 0 0 chr10 4142764 4142896 -136173869 + AT_rich Low_complexity Low_complexity 1 132 0 2311 64 3 20 chr10 4143119 4143436 -136173329 + AluY SINE Alu 1 311 0 800 215 19 66 chr10 4144766 4145022 -136171743 - MER31B LTR ERV1 -222 244 1 2141 119 14 0 chr10 4146360 4146655 -136170110 + AluSp SINE Alu 1 299 -14 774 269 23 5 chr10 4148515 4148731 -136168034 + L2 LINE L2 2420 2639 -675 220 295 96 75 chr10 4148783 4149169 -136167596 + L2 LINE L2 2829 3222 -91 203 138 0 0 chr10 4151123 4151152 -136165613 + (TAAG)n Simple_repeat Simple_repeat 3 31 0 622 167 15 0 chr10 4151232 4151364 -136165401 + GA-rich Low_complexity Low_complexity 2 135 0 181 343 95 19 chr10 4153456 4153561 -136163204 + L2 LINE L2 3200 3312 -1 1864 191 27 39 chr10 4153729 4154168 -136162597 - Tigger2a DNA MER2_type 0 434 1 34 55 0 0 chr10 4154230 4154285 -136162480 + AT_rich Low_complexity Low_complexity 1 55 0 329 329 0 77 chr10 4155748 4155761 -136161004 - MIR SINE MIR -81 181 169 1920 205 73 9 chr10 4155761 4156200 -136160565 - MLT1C LTR MaLR 0 467 1 329 329 0 77 chr10 4156200 4156341 -136160424 - MIR SINE MIR -93 169 39 235 214 0 0 chr10 4156692 4156734 -136160031 + polypyrimidine Low_complexity Low_complexity 2 43 0 23 0 0 0 chr10 4156899 4156922 -136159843 + AT_rich Low_complexity Low_complexity 1 23 0 2149 106 0 0 chr10 4160953 4161235 -136155530 + AluSx SINE Alu 1 282 -30 1748 157 42 12 chr10 4161441 4161773 -136154992 - L1PA15 LINE L1 0 6165 5824 208 313 104 26 chr10 4162181 4162296 -136154469 - L2 LINE L2 0 3313 3190 859 192 32 96 chr10 4162365 4162646 -136154119 + MLT2B1 LTR ERVL 5 267 -253 260 227 0 6 chr10 4162695 4162867 -136153898 + (TA)n Simple_repeat Simple_repeat 1 171 0 258 179 0 0 chr10 4162880 4162936 -136153829 + MLT2B1 LTR ERVL 460 515 0 2544 112 17 0 chr10 4163587 4163945 -136152820 - THE1B LTR MaLR 0 364 1 216 333 126 0 chr10 4164874 4164961 -136151804 + L2 LINE L2 3201 3298 -15 246 62 0 0 chr10 4164962 4164994 -136151771 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 1544 139 171 0 chr10 4165775 4166033 -136150732 - AluSx SINE Alu -10 302 1 480 231 110 50 chr10 4166394 4166576 -136150189 + MER58A DNA MER1_type 23 215 -9 2011 128 13 7 chr10 4166635 4166939 -136149826 + AluSx SINE Alu 1 306 -6 506 262 105 88 chr10 4167311 4167483 -136149282 + L1MEc LINE L1 2135 2302 -3913 2268 67 0 27 chr10 4167483 4167783 -136148982 - AluY SINE Alu -19 292 1 506 262 105 88 chr10 4167783 4167821 -136148944 + L1MEc LINE L1 2302 2338 -3877 1198 212 134 24 chr10 4167821 4168193 -136148572 + MLT2D LTR ERVL 1 413 -1 506 262 105 88 chr10 4168193 4168562 -136148203 + L1MEc LINE L1 2338 2686 -3529 813 189 9 0 chr10 4169301 4169529 -136147236 + (TCCA)n Simple_repeat Simple_repeat 1 230 0 480 305 7 13 chr10 4169567 4169718 -136147047 - L2 LINE L2 -6 3307 3158 2465 62 7 0 chr10 4170897 4171203 -136145562 + AluY SINE Alu 2 309 -2 243 61 0 0 chr10 4171285 4171318 -136145447 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 183 362 0 0 chr10 4172155 4172213 -136144552 + L2 LINE L2 3245 3302 -11 21 0 0 0 chr10 4173763 4173784 -136142981 + AT_rich Low_complexity Low_complexity 1 21 0 8402 157 21 12 chr10 4174122 4175669 -136141096 + Tigger1 DNA MER2_type 2 1562 -856 1037 166 32 9 chr10 4175670 4175887 -136140878 + Tigger1 DNA MER2_type 2197 2418 0 2163 128 10 7 chr10 4176243 4176549 -136140216 + AluSx SINE Alu 3 309 -3 377 245 32 0 chr10 4176767 4176861 -136139904 - Tigger2 DNA MER2_type -10 2708 2612 3875 187 24 5 chr10 4176866 4177673 -136139092 - Tigger2 DNA MER2_type -1894 824 3 3507 107 4 4 chr10 4179065 4179589 -136137176 - L1PB1 LINE L1 -5 6146 5623 2143 107 3 75 chr10 4179591 4180128 -136136637 + L1PB1 LINE L1 5086 5597 -554 185 105 0 26 chr10 4183665 4183703 -136133062 + (CA)n Simple_repeat Simple_repeat 2 38 0 833 331 72 24 chr10 4186817 4187682 -136129083 - ERVL-F LTR ERVL -4424 1340 361 826 84 0 15 chr10 4187809 4187940 -136128825 + (TTTC)n Simple_repeat Simple_repeat 2 130 0 273 275 61 15 chr10 4187978 4188046 -136128719 - ERVL-F LTR ERVL -5624 140 77 309 51 0 0 chr10 4188046 4188085 -136128680 + (CA)n Simple_repeat Simple_repeat 2 40 0 273 275 61 15 chr10 4188085 4188147 -136128618 - ERVL-F LTR ERVL -5687 77 4 1133 252 89 14 chr10 4188191 4188540 -136128225 - MLT2F LTR ERVL -58 605 231 1117 222 5 0 chr10 4188587 4188785 -136127980 + AluJb SINE Alu 86 284 -28 21 36 0 0 chr10 4191166 4191194 -136125571 + AT_rich Low_complexity Low_complexity 1 28 0 491 327 97 27 chr10 4191238 4191608 -136125157 + L2 LINE L2 1728 2123 -1191 286 297 94 92 chr10 4191809 4192014 -136124751 + L2 LINE L2 2560 2763 -509 1856 147 63 0 chr10 4192014 4192299 -136124466 - AluSx SINE Alu -9 303 1 286 297 94 92 chr10 4192299 4192571 -136124194 + L2 LINE L2 2763 3043 -229 2303 194 19 41 chr10 4192669 4193236 -136123529 - L1MB3 LINE L1 -339 5844 5290 22 0 0 0 chr10 4193262 4193284 -136123481 + AT_rich Low_complexity Low_complexity 1 22 0 707 195 24 76 chr10 4195676 4195886 -136120879 + MER20 DNA MER1_type 1 199 -20 1989 101 0 31 chr10 4195894 4196182 -136120583 + AluSx SINE Alu 1 279 -33 276 120 0 0 chr10 4196184 4196234 -136120531 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 1225 233 64 16 chr10 4197301 4197678 -136119087 - L1MC2 LINE L1 -11 6333 5939 284 288 74 25 chr10 4198171 4198334 -136118431 - MLT1J2 LTR MaLR -11 439 269 333 342 0 0 chr10 4198405 4198522 -136118243 - MLT1J1 LTR MaLR -291 155 39 361 216 43 9 chr10 4198954 4199070 -136117695 + L1ME3A LINE L1 6046 6165 -5 204 310 155 17 chr10 4199487 4199603 -136117162 + L2 LINE L2 3179 3310 -3 298 226 47 75 chr10 4200628 4200734 -136116031 + LTR16C LTR ERVL 387 489 -2 1415 173 46 87 chr10 4201397 4201720 -136115045 - AluJb SINE Alu -2 310 1 1333 51 11 0 chr10 4204112 4204290 -136112475 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2191 134 0 3 chr10 4204299 4204612 -136112153 - AluSx SINE Alu 0 312 1 246 32 0 0 chr10 4205141 4205172 -136111593 + (CA)n Simple_repeat Simple_repeat 2 32 0 219 182 61 0 chr10 4205589 4205655 -136111110 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 218 277 99 78 chr10 4205767 4206099 -136110666 + L2 LINE L2 2636 2974 -340 225 263 94 88 chr10 4206297 4206468 -136110297 + LTR16A1 LTR ERVL 286 457 0 207 360 40 8 chr10 4206632 4206757 -136110008 + L2 LINE L2 3113 3241 -72 1595 198 10 30 chr10 4207371 4207509 -136109256 + AluJb SINE Alu 1 140 -172 2317 73 3 3 chr10 4207509 4207795 -136108970 + AluSp SINE Alu 24 309 -4 1595 198 10 30 chr10 4207795 4207954 -136108811 + AluJb SINE Alu 140 292 -20 26 0 0 0 chr10 4207983 4208009 -136108756 + AT_rich Low_complexity Low_complexity 1 26 0 554 304 203 14 chr10 4208032 4208387 -136108378 - L2 LINE L2 0 3313 2892 21 0 0 0 chr10 4209005 4209026 -136107739 + AT_rich Low_complexity Low_complexity 1 21 0 244 328 0 0 chr10 4209029 4209093 -136107672 + (TG)n Simple_repeat Simple_repeat 1 64 0 210 262 0 0 chr10 4209106 4209190 -136107575 + (TG)n Simple_repeat Simple_repeat 2 85 0 2750 80 3 0 chr10 4210765 4211117 -136105648 - THE1A LTR MaLR -1 354 2 1845 164 0 10 chr10 4211896 4212184 -136104581 + AluJo SINE Alu 1 286 -22 252 77 0 0 chr10 4212184 4212223 -136104542 + (CATA)n Simple_repeat Simple_repeat 2 40 0 282 289 91 5 chr10 4214020 4214207 -136102558 - HAL1 LINE L1 -588 1919 1717 400 270 39 103 chr10 4214270 4214503 -136102262 - HAL1 LINE L1 -1448 1059 842 423 0 0 0 chr10 4214844 4214891 -136101874 + (TA)n Simple_repeat Simple_repeat 1 47 0 1320 238 127 30 chr10 4215949 4216415 -136100350 + MLT2B2 LTR ERVL 1 511 -4 2174 125 0 3 chr10 4216590 4216981 -136099784 - L1PA10 LINE L1 -570 5598 5209 3813 97 24 0 chr10 4216981 4217518 -136099247 + L1PA10 LINE L1 5618 6168 0 1146 183 0 8 chr10 4217982 4218217 -136098548 - Tigger7 DNA MER2_type 0 2487 2255 254 182 0 0 chr10 4218236 4218280 -136098485 - Tigger7 DNA MER2_type -292 47 4 227 351 55 18 chr10 4218498 4218663 -136098102 - MIR SINE MIR -3 259 89 197 312 56 40 chr10 4220990 4221115 -136095650 + L2 LINE L2 2659 2785 -529 359 268 113 30 chr10 4221145 4221313 -136095452 + MIR SINE MIR 11 192 -70 832 184 5 40 chr10 4221759 4221960 -136094805 - MER39B LTR ERV1 0 653 460 2000 227 39 16 chr10 4221963 4222478 -136094287 + MER87 LTR ERV1 11 537 -4 2504 140 35 22 chr10 4222483 4222939 -136093826 - MER39B LTR ERV1 -191 462 1 970 240 71 73 chr10 4223298 4223831 -136092934 - MER34B LTR ERV1 0 565 34 393 171 0 0 chr10 4225113 4225183 -136091582 + L1MA3 LINE L1 6180 6249 -56 563 141 0 0 chr10 4225186 4225278 -136091487 + L1MA1 LINE L1 6211 6302 0 2002 147 0 3 chr10 4227246 4227566 -136089199 - AluSx SINE Alu 0 312 7 2345 156 54 49 chr10 4228011 4228076 -136088689 - MER34B LTR ERV1 -29 536 473 504 30 0 0 chr10 4228076 4228143 -136088622 + L1PB3 LINE L1 6087 6153 -1 2345 156 54 49 chr10 4228143 4228610 -136088155 - MER34B LTR ERV1 -92 473 1 1826 118 0 0 chr10 4229213 4229458 -136087307 - AluSx SINE Alu -4 308 64 1558 220 66 18 chr10 4231318 4231759 -136085006 + MLT1C LTR MaLR 6 467 0 2586 59 0 0 chr10 4232615 4232919 -136083846 + AluY SINE Alu 1 304 -7 31 26 0 0 chr10 4233010 4233048 -136083717 + AT_rich Low_complexity Low_complexity 1 38 0 26 0 0 0 chr10 4233754 4233780 -136082985 + AT_rich Low_complexity Low_complexity 1 26 0 23 68 0 0 chr10 4234195 4234239 -136082526 + AT_rich Low_complexity Low_complexity 1 44 0 1434 228 25 11 chr10 4234679 4235038 -136081727 - MLT1A1 LTR MaLR -1 364 1 27 0 0 0 chr10 4235194 4235221 -136081544 + AT_rich Low_complexity Low_complexity 1 27 0 581 287 75 37 chr10 4235852 4236308 -136080457 - L1ME3 LINE L1 -211 6020 5548 450 67 0 0 chr10 4236414 4236474 -136080291 + Alu SINE Alu 232 291 -18 275 208 0 56 chr10 4236477 4236549 -136080216 + MIR SINE MIR 172 239 -23 264 286 0 0 chr10 4236557 4236613 -136080152 + MIR SINE MIR 200 255 -7 1649 158 0 58 chr10 4236721 4237032 -136079733 + AluJb SINE Alu 1 293 -19 357 174 0 0 chr10 4237033 4237102 -136079663 + GA-rich Low_complexity Low_complexity 2 70 0 669 204 0 0 chr10 4237815 4237962 -136078803 + (CA)n Simple_repeat Simple_repeat 1 147 0 2586 64 0 0 chr10 4237994 4238305 -136078460 - AluY SINE Alu 0 311 1 1913 301 53 50 chr10 4238330 4239257 -136077508 + L2 LINE L2 584 1513 -1801 458 224 0 20 chr10 4239272 4239470 -136077295 - L1ME3 LINE L1 -778 5533 5163 723 205 0 0 chr10 4239478 4239605 -136077160 - FLAM_C SINE Alu -16 127 1 1898 250 51 38 chr10 4239605 4240392 -136076373 - L1ME3 LINE L1 -1034 5181 4385 3972 163 30 36 chr10 4240398 4240979 -136075786 - L1MB3 LINE L1 -3 6180 5604 1948 157 118 18 chr10 4240979 4241368 -136075397 + MSTA LTR MaLR 1 428 0 3972 163 30 36 chr10 4241368 4241657 -136075108 - L1MB3 LINE L1 -579 5604 5315 707 257 93 13 chr10 4241654 4241954 -136074811 - L1ME3 LINE L1 -2159 4056 3733 * 1611 299 48 19 chr10 4241995 4242794 -136073971 - L1ME3 LINE L1 -5381 1015 194 735 135 7 85 chr10 4242903 4243044 -136073721 + AluSg/x SINE Alu 166 295 -15 316 309 98 5 chr10 4245150 4245196 -136071569 + L1ME4a LINE L1 5893 5933 -188 1759 173 4 0 chr10 4245196 4245474 -136071291 + AluJb SINE Alu 1 279 -33 316 309 98 5 chr10 4245474 4245621 -136071144 + L1ME4a LINE L1 5933 6104 -17 2060 112 31 0 chr10 4246543 4246830 -136069935 - AluSq SINE Alu -10 303 8 196 211 123 0 chr10 4246954 4247011 -136069754 + MIR SINE MIR 83 146 -62 1867 188 18 13 chr10 4247068 4247456 -136069309 + MLT1B LTR MaLR 1 390 0 230 378 71 0 chr10 4247819 4247946 -136068819 + MIR3 SINE MIR 58 193 -15 1482 125 51 0 chr10 4248095 4248311 -136068454 + AluSg/x SINE Alu 72 298 -12 1264 187 112 37 chr10 4248446 4248767 -136067998 - MER7A DNA MER2_type -3 343 1 183 200 27 13 chr10 4248923 4248998 -136067767 + (TA)n Simple_repeat Simple_repeat 2 77 0 369 109 0 0 chr10 4249033 4249088 -136067677 + (TA)n Simple_repeat Simple_repeat 1 55 0 241 322 154 43 chr10 4249098 4249306 -136067459 + MIR SINE MIR 32 262 0 294 180 0 0 chr10 4249686 4249747 -136067018 + CT-rich Low_complexity Low_complexity 4 64 0 1081 60 16 28 chr10 4249763 4249945 -136066820 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1858 169 3 19 chr10 4249953 4250260 -136066505 - AluSx SINE Alu -10 302 1 288 211 0 0 chr10 4250424 4250500 -136066265 + CT-rich Low_complexity Low_complexity 1 76 0 272 250 0 28 chr10 4250530 4250553 -136066212 + MER3 DNA MER1_type 27 47 -162 632 259 52 5 chr10 4250553 4250746 -136066019 - MER3 DNA MER1_type 0 209 8 506 398 46 16 chr10 4250947 4251445 -136065320 + L3 LINE CR1 929 1441 -136 2025 128 3 0 chr10 4251539 4251847 -136064918 + AluSx SINE Alu 1 309 0 1503 183 44 24 chr10 4252179 4252516 -136064249 - MLT1C LTR MaLR 0 467 118 526 168 19 9 chr10 4252516 4252623 -136064142 - AluJb SINE Alu -13 299 192 642 142 8 90 chr10 4252623 4252757 -136064008 - MLT1C LTR MaLR -267 123 1 353 326 54 32 chr10 4252848 4253161 -136063604 + L2 LINE L2 2709 3022 -250 398 311 190 6 chr10 4253276 4253607 -136063158 + L1ME2 LINE L1 5728 6119 -45 413 130 0 0 chr10 4255333 4255402 -136061363 + MER66B LTR ERV1 418 486 0 2063 154 0 0 chr10 4255491 4255789 -136060976 - AluSx SINE Alu -14 298 1 21 0 0 0 chr10 4255834 4255855 -136060910 + AT_rich Low_complexity Low_complexity 1 21 0 2242 120 0 0 chr10 4255871 4256170 -136060595 - AluSx SINE Alu -13 299 1 719 319 107 18 chr10 4258073 4258730 -136058035 - L2 LINE L2 -298 3015 2294 640 105 11 0 chr10 4259307 4259402 -136057363 + L1PB2 LINE L1 6053 6148 -3 25 0 0 0 chr10 4259402 4259427 -136057338 + AT_rich Low_complexity Low_complexity 1 25 0 3586 172 12 10 chr10 4259881 4260572 -136056193 - L1MB7 LINE L1 -9 6175 5484 326 90 254 0 chr10 4260588 4260655 -136056110 + L1MB3 LINE L1 6081 6164 -19 2789 102 0 10 chr10 4260675 4261087 -136055678 - L1PB1 LINE L1 0 6151 5744 657 296 66 84 chr10 4261498 4261950 -136054815 + MLT1J2 LTR MaLR 2 445 -5 1377 236 53 63 chr10 4262380 4262950 -136053815 + MER34B LTR ERV1 3 565 0 344 284 60 8 chr10 4263039 4263173 -136053592 - L2 LINE L2 0 3272 3132 217 384 15 8 chr10 4265480 4265613 -136051152 - L2 LINE L2 -6 3266 3133 352 303 21 14 chr10 4265735 4265877 -136050888 + MIR SINE MIR 86 228 -34 194 292 0 15 chr10 4266351 4266416 -136050349 - MIR SINE MIR 0 262 199 236 307 13 0 chr10 4266519 4266594 -136050171 - MIR SINE MIR -82 180 105 2222 128 0 0 chr10 4267957 4268263 -136048502 + AluSx SINE Alu 1 306 -6 1222 132 57 0 chr10 4268477 4268689 -136048076 + L1MA5A LINE L1 6071 6294 -3 23 54 0 0 chr10 4269279 4269316 -136047449 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 4269365 4269386 -136047379 + AT_rich Low_complexity Low_complexity 1 21 0 399 330 61 45 chr10 4269820 4270150 -136046615 + L1MC/D LINE L1 425 759 -5360 22 0 0 0 chr10 4270181 4270203 -136046562 + AT_rich Low_complexity Low_complexity 1 22 0 396 298 70 85 chr10 4270275 4270416 -136046349 + L1MC/D LINE L1 900 1042 -5077 360 64 0 0 chr10 4270416 4270463 -136046302 + (CA)n Simple_repeat Simple_repeat 1 47 0 396 298 70 85 chr10 4270463 4270650 -136046115 + L1MC/D LINE L1 1042 1223 -4896 342 316 134 20 chr10 4270785 4271181 -136045584 + L1MC/D LINE L1 2806 3246 -2883 527 121 165 0 chr10 4271182 4271273 -136045492 + AluSc SINE Alu 155 260 -49 400 349 27 36 chr10 4271397 4271727 -136045038 + L1MC/D LINE L1 4943 5269 -860 485 328 54 20 chr10 4271760 4272166 -136044599 + L1MC/D LINE L1 5311 5730 -2061 303 312 118 94 chr10 4273512 4273884 -136042881 + L1ME3A LINE L1 677 1057 -5473 2068 120 3 23 chr10 4274002 4274338 -136042427 + AluSx SINE Alu 1 312 0 364 286 5 43 chr10 4274481 4274666 -136042099 + L1ME3A LINE L1 1410 1587 -4943 247 340 28 0 chr10 4274828 4274934 -136041831 + L1ME3A LINE L1 1686 1794 -4748 321 289 117 49 chr10 4275299 4275565 -136041200 + L1ME3A LINE L1 2365 2648 -3892 342 312 76 30 chr10 4275660 4275923 -136040842 + L1ME3A LINE L1 3815 4089 -2451 687 307 63 8 chr10 4275988 4276353 -136040412 + L1ME3A LINE L1 4233 4617 -1923 366 318 90 67 chr10 4276440 4276931 -136039834 + L1ME3A LINE L1 4735 5236 -1304 829 141 33 0 chr10 4277355 4277476 -136039289 - FLAM_C SINE Alu -18 125 1 5349 163 22 9 chr10 4278411 4279390 -136037375 - L1MC1 LINE L1 -5 6328 5337 36 40 0 0 chr10 4281035 4281085 -136035680 + AT_rich Low_complexity Low_complexity 1 50 0 28 29 0 0 chr10 4281885 4281920 -136034845 + AT_rich Low_complexity Low_complexity 1 35 0 940 287 138 14 chr10 4282666 4283181 -136033584 + L1ME3A LINE L1 5977 6555 -9 285 281 104 18 chr10 4283177 4283341 -136033424 + L1ME4a LINE L1 5943 6120 -1 * 4979 245 60 31 chr10 4283977 4287020 -136029745 - L1MD2 LINE L1 -2 6617 3490 1816 287 17 4 chr10 4287030 4287724 -136029041 - L1MD2 LINE L1 -3218 3188 2486 1363 312 9 27 chr10 4287856 4288301 -136028464 - L1MD2 LINE L1 -5965 444 8 525 305 0 8 chr10 4288674 4288805 -136027960 + MER5A DNA MER1_type 1 130 -59 2433 45 3 0 chr10 4288828 4289120 -136027645 - AluY SINE Alu -18 293 1 199 329 14 0 chr10 4289147 4289220 -136027545 - L2 LINE L2 -1454 1860 1787 1905 181 57 24 chr10 4289689 4290109 -136026656 + Tigger2a DNA MER2_type 1 434 0 248 154 31 31 chr10 4290381 4290446 -136026319 + (TG)n Simple_repeat Simple_repeat 2 66 0 771 169 0 0 chr10 4290591 4290709 -136026056 - FLAM_C SINE Alu -25 118 1 212 200 50 0 chr10 4291290 4291370 -136025395 + (TA)n Simple_repeat Simple_repeat 1 84 0 22 70 0 0 chr10 4292035 4292078 -136024687 + AT_rich Low_complexity Low_complexity 1 43 0 27 49 0 0 chr10 4292290 4292331 -136024434 + AT_rich Low_complexity Low_complexity 1 41 0 180 0 0 0 chr10 4292729 4292749 -136024016 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1829 128 39 7 chr10 4292751 4292906 -136023859 - AluSx SINE Alu -21 291 122 279 0 0 0 chr10 4292906 4292937 -136023828 + (TG)n Simple_repeat Simple_repeat 2 32 0 1829 128 39 7 chr10 4292937 4293063 -136023702 - AluSx SINE Alu -190 122 1 260 360 43 0 chr10 4293065 4293204 -136023561 - L2 LINE L2 -535 2779 2635 356 278 110 86 chr10 4293512 4293757 -136023008 + MIR SINE MIR 12 262 0 273 299 88 15 chr10 4296716 4296853 -136019912 - L2 LINE L2 -6 3307 3161 227 350 68 23 chr10 4297158 4297378 -136019387 - MIR SINE MIR -13 249 20 1770 170 47 19 chr10 4297815 4298180 -136018585 - THE1C LTR MaLR 0 375 1 581 124 0 0 chr10 4298677 4298774 -136017991 - L1PA15 LINE L1 -8 6157 6061 2624 254 49 31 chr10 4298881 4300034 -136016731 - L1M4 LINE L1 -2498 3648 2475 892 251 88 91 chr10 4300094 4300843 -136015922 - L1MCb LINE L1 -5298 747 1 193 320 13 13 chr10 4301871 4301946 -136014819 + L2 LINE L2 3195 3269 -3 311 295 32 0 chr10 4302723 4302818 -136013947 - MER5A DNA MER1_type -79 110 13 433 250 52 0 chr10 4303060 4303176 -136013589 + MIR SINE MIR 111 232 -30 1553 154 33 46 chr10 4303255 4303561 -136013204 - AluJb SINE Alu -10 302 1 719 250 5 21 chr10 4303602 4303790 -136012975 - MER5A DNA MER1_type -1 188 4 231 36 0 0 chr10 4304373 4304401 -136012364 + (CCTG)n Simple_repeat Simple_repeat 1 28 0 2154 117 0 0 chr10 4305277 4305608 -136011157 + AluSx SINE Alu 1 331 0 194 310 23 11 chr10 4306359 4306446 -136010319 - L2 LINE L2 -462 2852 2765 1279 199 153 3 chr10 4307705 4308006 -136008759 + MER7A DNA MER2_type 3 346 0 616 296 151 20 chr10 4308016 4308414 -136008351 - MLT1J2 LTR MaLR 0 450 1 228 235 20 0 chr10 4308561 4308612 -136008153 + CT-rich Low_complexity Low_complexity 4 55 0 832 121 14 0 chr10 4309686 4309827 -136006938 + (GAAA)n Simple_repeat Simple_repeat 2 144 0 1845 104 7 0 chr10 4311141 4311411 -136005354 + THE1B LTR MaLR 93 364 0 1478 220 24 69 chr10 4311630 4312093 -136004672 - MLT2B1 LTR ERVL -74 446 5 2099 118 0 0 chr10 4312202 4312520 -136004245 - AluSg SINE Alu 0 318 1 33 0 0 0 chr10 4313051 4313084 -136003681 + AT_rich Low_complexity Low_complexity 1 33 0 248 312 109 18 chr10 4313715 4313991 -136002774 + L1ME2 LINE L1 4950 5250 -896 600 326 59 25 chr10 4313992 4314581 -136002184 + L1ME LINE L1 29 637 -5433 263 301 0 0 chr10 4314815 4314908 -136001857 + L1ME LINE L1 537 629 -5441 255 312 0 0 chr10 4314927 4315020 -136001745 + L1ME LINE L1 537 629 -5441 812 229 41 28 chr10 4315047 4315410 -136001355 + L1ME LINE L1 545 912 -5158 723 265 59 97 chr10 4315414 4316021 -136000744 + L1ME2 LINE L1 5494 6077 -87 21 36 0 0 chr10 4316091 4316119 -136000646 + AT_rich Low_complexity Low_complexity 1 28 0 1745 149 3 21 chr10 4317812 4318094 -135998671 + AluJb SINE Alu 1 277 -35 180 273 146 0 chr10 4319704 4319759 -135997006 + MIR SINE MIR 57 119 -143 326 184 23 35 chr10 4319977 4320064 -135996701 + MER89 LTR ERV1 1 86 -473 280 210 105 24 chr10 4320038 4320162 -135996603 + MER89 LTR ERV1 197 330 -229 * 1878 160 77 34 chr10 4320958 4321468 -135995297 + MLT2A2 LTR ERVL 3 554 0 1012 220 118 32 chr10 4321540 4321913 -135994852 + MER119 DNA MER1_type 176 580 -3 522 83 0 0 chr10 4323545 4323617 -135993148 + (TA)n Simple_repeat Simple_repeat 1 72 0 6962 35 3 0 chr10 4324312 4325531 -135991234 - L1PA4 LINE L1 -20 6135 4913 803 278 81 17 chr10 4327197 4327557 -135989208 - L1ME3A LINE L1 -5 6165 5783 529 288 127 22 chr10 4327561 4327828 -135988937 - L1ME3A LINE L1 -423 5747 5453 1551 187 57 3 chr10 4330638 4331000 -135985765 - MLT1B LTR MaLR -14 453 1 2457 54 0 3 chr10 4331491 4331788 -135984977 - AluY SINE Alu -15 296 1 781 194 0 8 chr10 4332534 4332668 -135984097 + FLAM_C SINE Alu 1 133 -10 2174 102 0 10 chr10 4332682 4332977 -135983788 - AluSx SINE Alu -16 296 5 39 60 0 0 chr10 4333233 4333300 -135983465 + AT_rich Low_complexity Low_complexity 1 67 0 462 260 46 4 chr10 4333447 4333619 -135983146 + MER92A LTR ERV1 264 412 0 24 0 0 0 chr10 4335702 4335726 -135981039 + AT_rich Low_complexity Low_complexity 1 24 0 256 229 14 14 chr10 4336143 4336213 -135980552 + CT-rich Low_complexity Low_complexity 2 71 0 185 324 73 0 chr10 4336439 4336507 -135980258 - MER5A DNA MER1_type 0 189 117 22 0 0 0 chr10 4337001 4337023 -135979742 + AT_rich Low_complexity Low_complexity 1 22 0 2333 106 0 3 chr10 4337693 4338005 -135978760 + AluY SINE Alu 1 311 0 22 0 0 0 chr10 4338090 4338112 -135978653 + AT_rich Low_complexity Low_complexity 1 22 0 1089 197 10 10 chr10 4338267 4338475 -135978290 + AluJo SINE Alu 87 294 -18 1901 180 107 7 chr10 4338751 4339189 -135977576 - MER31A LTR ERV1 0 485 4 1694 194 61 16 chr10 4339451 4340061 -135976704 + MER39 LTR ERV1 2 701 -6 25 31 0 0 chr10 4341398 4341430 -135975335 + AT_rich Low_complexity Low_complexity 1 32 0 1121 216 24 0 chr10 4341891 4342145 -135974620 + MER57A LTR ERV1 1 260 -143 235 362 12 0 chr10 4342687 4342850 -135973915 + (CACTT)n Simple_repeat Simple_repeat 2 166 0 220 307 21 14 chr10 4343482 4343622 -135973143 + (CTTTA)n Simple_repeat Simple_repeat 3 143 0 244 64 21 0 chr10 4343666 4343713 -135973052 + MER57A LTR ERV1 215 262 -141 258 358 0 6 chr10 4343821 4344000 -135972765 + (CTTTA)n Simple_repeat Simple_repeat 2 179 0 244 64 21 0 chr10 4344003 4344050 -135972715 + MER57A LTR ERV1 215 262 -141 219 297 29 17 chr10 4344060 4344235 -135972530 + (CACTT)n Simple_repeat Simple_repeat 4 180 0 273 301 45 0 chr10 4346367 4346523 -135970242 - MER117 DNA MER1_type -5 192 30 515 191 15 15 chr10 4349787 4349918 -135966847 + CT-rich Low_complexity Low_complexity 1 180 0 1370 196 9 82 chr10 4349918 4350249 -135966516 - AluJb SINE Alu -5 307 1 214 339 161 37 chr10 4350631 4350985 -135965780 - L3 LINE CR1 -761 816 419 198 303 76 41 chr10 4351627 4351772 -135964993 + L2 LINE L2 2380 2529 -785 199 356 29 10 chr10 4354313 4354417 -135962348 + L2 LINE L2 3164 3269 -3 350 194 37 46 chr10 4354724 4354832 -135961933 + MER69 DNA AcHobo 2408 2514 -12 22 0 0 0 chr10 4355267 4355289 -135961476 + AT_rich Low_complexity Low_complexity 1 22 0 265 293 17 17 chr10 4355487 4355603 -135961162 + LTR67 LTR ERVL 429 544 -13 217 241 37 19 chr10 4355617 4355671 -135961094 - MIR3 SINE MIR -36 172 118 292 236 18 0 chr10 4356209 4356319 -135960446 + (CA)n Simple_repeat Simple_repeat 1 112 0 406 261 12 0 chr10 4356342 4356507 -135960258 + (CA)n Simple_repeat Simple_repeat 1 167 0 2853 227 24 27 chr10 4357175 4357885 -135958880 + L1MB5 LINE L1 5431 6138 -36 266 185 15 15 chr10 4359722 4359787 -135956978 + MER4-int LTR ERV1 1102 1166 -5432 188 167 21 0 chr10 4359809 4359857 -135956908 + (TG)n Simple_repeat Simple_repeat 2 50 0 401 133 13 0 chr10 4360112 4360187 -135956578 + GA-rich Low_complexity Low_complexity 3 78 0 2247 107 0 0 chr10 4361143 4361432 -135955333 - AluSq SINE Alu -24 289 1 255 267 0 0 chr10 4361521 4361581 -135955184 + (TG)n Simple_repeat Simple_repeat 1 60 0 250 194 30 0 chr10 4361581 4361648 -135955117 + (TA)n Simple_repeat Simple_repeat 2 70 0 227 152 0 0 chr10 4361648 4361694 -135955071 - LTR66 LTR ERVL -171 439 394 209 186 35 12 chr10 4361793 4361879 -135954886 + (TA)n Simple_repeat Simple_repeat 2 89 0 299 198 23 47 chr10 4362430 4362516 -135954249 - L1MEc LINE L1 -6274 122 39 2431 51 7 0 chr10 4363940 4364235 -135952530 + AluY SINE Alu 1 297 -14 1138 219 100 14 chr10 4364855 4365210 -135951555 - MLT1C LTR MaLR 0 467 81 911 83 0 0 chr10 4365210 4365331 -135951434 + L1PA13 LINE L1 6030 6150 -13 941 203 0 0 chr10 4365341 4365504 -135951261 + FRAM SINE Alu 1 160 -16 233 121 0 0 chr10 4365517 4365550 -135951215 - MER65A LTR ERV1 -218 227 195 279 234 39 0 chr10 4365558 4365635 -135951130 - MLT1C LTR MaLR -387 80 1 184 352 159 27 chr10 4365989 4366361 -135950404 + L2 LINE L2 2319 2739 -575 1298 191 88 27 chr10 4366471 4366801 -135949964 - MLT1A1 LTR MaLR 0 365 16 255 335 113 38 chr10 4366959 4367198 -135949567 + L2 LINE L2 3003 3259 -54 1195 233 92 85 chr10 4369705 4370315 -135946450 - MLT1E3 LTR MaLR -2 622 9 1641 194 10 0 chr10 4370319 4370613 -135946152 + AluJo SINE Alu 1 297 -15 3141 171 86 21 chr10 4370742 4371420 -135945345 - MER72 LTR ERV1 0 722 1 21 57 0 0 chr10 4372035 4372070 -135944695 + AT_rich Low_complexity Low_complexity 1 35 0 2312 103 0 3 chr10 4372639 4372951 -135943814 - AluSq SINE Alu -2 311 1 3592 235 104 16 chr10 4373861 4375068 -135941697 + Charlie1 DNA MER1_type 1449 2761 0 33 0 0 0 chr10 4376302 4376335 -135940430 + AT_rich Low_complexity Low_complexity 1 33 0 265 230 0 23 chr10 4376626 4376713 -135940052 + (CATA)n Simple_repeat Simple_repeat 4 88 0 184 240 47 130 chr10 4376723 4376795 -135939970 + MIR SINE MIR 88 164 -98 1581 197 13 7 chr10 4376795 4377095 -135939670 + AluJo SINE Alu 1 302 -10 184 240 47 130 chr10 4377095 4377202 -135939563 + MIR SINE MIR 164 256 -6 189 213 0 0 chr10 4377405 4377452 -135939313 + GA-rich Low_complexity Low_complexity 1 47 0 213 146 24 0 chr10 4378713 4378754 -135938011 + A-rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr10 4379469 4379493 -135937272 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 4379770 4379792 -135936973 + AT_rich Low_complexity Low_complexity 1 22 0 4336 252 69 55 chr10 4379852 4380037 -135936728 - L1MB7 LINE L1 0 6184 6003 1494 28 0 11 chr10 4380037 4380219 -135936546 + L1PA3 LINE L1 5976 6155 0 4336 252 69 55 chr10 4380219 4380661 -135936104 - L1MB7 LINE L1 -181 6003 5568 1818 149 0 17 chr10 4380661 4380962 -135935803 - AluJo SINE Alu -16 296 1 4336 252 69 55 chr10 4380962 4383376 -135933389 - L1MB7 LINE L1 -616 5568 3188 1677 166 3 21 chr10 4383376 4383695 -135933070 + AluJb SINE Alu 1 314 0 4336 252 69 55 chr10 4383695 4384578 -135932187 - L1MB7 LINE L1 -2996 3188 3784 2059 144 32 16 chr10 4384578 4384947 -135931818 + THE1C LTR MaLR 1 375 0 4336 252 69 55 chr10 4384947 4385313 -135931452 - L1MB7 LINE L1 -2399 3785 3425 6032 249 44 50 chr10 4385428 4388075 -135928690 + L1M4 LINE L1 2467 5098 -1048 404 238 10 0 chr10 4388123 4388224 -135928541 + L1MC1 LINE L1 6232 6333 0 2227 102 0 0 chr10 4388247 4388541 -135928224 - AluSc SINE Alu -15 294 1 1894 144 30 7 chr10 4388770 4389069 -135927696 + AluSx SINE Alu 1 306 -6 358 274 108 0 chr10 4389412 4389569 -135927196 + MIR SINE MIR 89 262 0 954 231 158 7 chr10 4389844 4390142 -135926623 + MER2 DNA MER2_type 1 343 -1 2613 259 41 18 chr10 4390166 4390626 -135926139 - L1MC4 LINE L1 0 8042 7553 782 187 42 61 chr10 4390626 4390840 -135925925 + MER6B DNA MER2_type 1 210 0 2613 259 41 18 chr10 4390840 4391216 -135925549 - L1MC4 LINE L1 -489 7553 7187 2316 160 42 7 chr10 4391860 4392267 -135924498 + MSTB LTR MaLR 6 426 0 620 313 27 30 chr10 4396921 4397183 -135919582 - MIR SINE MIR 0 262 2 6778 160 51 24 chr10 4397982 4399282 -135917483 - Tigger1 DNA MER2_type 0 2418 1084 2323 164 32 50 chr10 4399288 4399787 -135916978 - Tigger1 DNA MER2_type -1928 490 1 206 285 159 46 chr10 4400720 4400871 -135915894 + L3 LINE CR1 280 447 -1130 355 255 150 13 chr10 4400928 4401081 -135915684 - L2 LINE L2 -12 3301 3128 381 266 94 47 chr10 4401833 4402130 -135914635 - MLT1J LTR MaLR -7 504 194 522 273 78 7 chr10 4403549 4403857 -135912908 - L1MB7 LINE L1 -2951 3195 2866 5150 80 11 23 chr10 4403862 4404647 -135912118 + L1PA8A LINE L1 5355 6130 -1 441 314 7 37 chr10 4404650 4404839 -135911926 - L1MB7 LINE L1 -3267 2879 2696 28 61 0 0 chr10 4404903 4404952 -135911813 + AT_rich Low_complexity Low_complexity 1 49 0 354 123 0 0 chr10 4405603 4405660 -135911105 + (CA)n Simple_repeat Simple_repeat 2 58 0 203 248 9 0 chr10 4405692 4405797 -135910968 + (TA)n Simple_repeat Simple_repeat 1 106 0 243 0 0 0 chr10 4405798 4405825 -135910940 + (CA)n Simple_repeat Simple_repeat 2 28 0 2147 125 3 0 chr10 4406666 4406962 -135909803 + AluSp SINE Alu 1 297 -16 486 47 94 0 chr10 4406962 4407090 -135909675 + (TA)n Simple_repeat Simple_repeat 1 140 0 446 313 98 9 chr10 4407836 4408060 -135908705 + MIR SINE MIR 18 261 -1 216 0 0 0 chr10 4408360 4408384 -135908381 + (A)n Simple_repeat Simple_repeat 1 24 0 270 0 0 0 chr10 4410902 4410932 -135905833 + (CA)n Simple_repeat Simple_repeat 2 31 0 183 227 78 109 chr10 4411220 4411348 -135905417 + L2 LINE L2 2552 2675 -639 3430 158 39 2 chr10 4411716 4412328 -135904437 - MER41B LTR ERV1 0 635 1 230 329 61 0 chr10 4412362 4412444 -135904321 + L2 LINE L2 3209 3295 -18 1472 189 0 0 chr10 4412581 4412846 -135903919 + MLT1A1 LTR MaLR 101 365 0 306 0 0 0 chr10 4413162 4413196 -135903569 + (CA)n Simple_repeat Simple_repeat 1 34 0 398 94 16 0 chr10 4413398 4413462 -135903303 + (TTCC)n Simple_repeat Simple_repeat 3 67 0 3381 154 48 9 chr10 4415967 4416598 -135900167 - L1PA15 LINE L1 -7 6158 5504 2213 112 3 0 chr10 4417055 4417359 -135899406 - AluSx SINE Alu -7 305 1 268 318 91 0 chr10 4417581 4417691 -135899074 + L2 LINE L2 2939 3058 -214 207 224 0 86 chr10 4418247 4418363 -135898402 + A-rich Low_complexity Low_complexity 2 107 0 208 153 25 76 chr10 4418815 4418972 -135897793 + (TA)n Simple_repeat Simple_repeat 1 149 0 253 323 42 37 chr10 4419912 4420101 -135896664 - L2 LINE L2 0 3313 3124 722 214 11 32 chr10 4420157 4420344 -135896421 - MER58A DNA MER1_type -40 184 2 501 359 38 23 chr10 4420388 4420650 -135896115 - L2 LINE L2 -244 3069 2804 242 275 44 0 chr10 4421063 4421154 -135895611 - L1MEc LINE L1 -3730 2485 2391 4713 165 32 5 chr10 4421167 4422184 -135894581 - L1PA16 LINE L1 -9 6157 5116 537 260 34 15 chr10 4422218 4422483 -135894282 - L1MEc LINE L1 -3992 2404 2135 357 261 60 19 chr10 4422643 4422858 -135893907 - L1MEc LINE L1 -5320 1076 853 3507 127 32 18 chr10 4472860 4473458 -135843307 - MER4B LTR ERV1 -4 606 1 201 239 204 23 chr10 4473461 4473549 -135843216 - L2 LINE L2 -1084 2230 2127 930 314 192 39 chr10 4473643 4474499 -135842266 - L2 LINE L2 -1359 1955 969 1598 247 89 21 chr10 4474561 4475088 -135841677 + MLT1E2 LTR MaLR 63 625 -1 201 360 23 23 chr10 4475129 4475301 -135841464 - L2 LINE L2 -2424 890 719 182 333 0 0 chr10 4476518 4476566 -135840199 + L2 LINE L2 3207 3254 -18 323 259 36 9 chr10 4478596 4478708 -135838057 - MIR3 SINE MIR -5 203 89 305 243 75 56 chr10 4479140 4479247 -135837518 + HAL1 LINE L1 1914 2022 -485 1848 289 128 40 chr10 4479327 4480535 -135836230 - L2 LINE L2 -365 2949 1635 274 268 106 7 chr10 4481066 4481208 -135835557 + HAL1 LINE L1 2243 2398 -109 207 167 0 0 chr10 4481987 4482029 -135834736 + T-rich Low_complexity Low_complexity 1 42 0 180 0 0 0 chr10 4482349 4482369 -135834396 + (T)n Simple_repeat Simple_repeat 1 20 0 246 190 13 25 chr10 4482693 4482772 -135833993 + (TA)n Simple_repeat Simple_repeat 2 79 0 1020 171 6 0 chr10 4483361 4483536 -135833229 - L1PB3 LINE L1 -11 6143 5968 191 357 10 20 chr10 4484027 4484125 -135832640 + L2 LINE L2 3141 3237 -35 1906 159 12 18 chr10 4484159 4484672 -135832093 + MER39B LTR ERV1 1 603 -50 863 163 182 36 chr10 4484672 4484964 -135831801 - MER61C LTR ERV1 0 434 1 23 0 0 0 chr10 4485351 4485374 -135831391 + AT_rich Low_complexity Low_complexity 1 23 0 29 28 0 0 chr10 4487584 4487620 -135829145 + AT_rich Low_complexity Low_complexity 1 36 0 1315 102 0 0 chr10 4488085 4488287 -135828478 - AluSg/x SINE Alu 0 318 117 235 152 121 15 chr10 4488746 4488812 -135827953 - MIR SINE MIR -33 229 157 1025 126 7 0 chr10 4490690 4490841 -135825924 + AluSp SINE Alu 1 152 -161 1161 86 0 7 chr10 4491101 4491252 -135825513 - AluSp/q SINE Alu -10 303 154 241 211 125 79 chr10 4491363 4491515 -135825250 + L1MC5 LINE L1 7752 7910 -51 1999 142 0 7 chr10 4491655 4491999 -135824766 - AluSx SINE Alu 0 312 1 443 117 0 0 chr10 4492090 4492167 -135824598 + L1PA13 LINE L1 5939 6015 -148 687 39 39 0 chr10 4492359 4492461 -135824304 + (TAGA)n Simple_repeat Simple_repeat 4 109 0 319 308 112 14 chr10 4492470 4492684 -135824081 + L1MEc LINE L1 1925 2159 -4237 732 310 29 55 chr10 4492710 4493094 -135823671 - MLT1B LTR MaLR -16 374 1 357 234 5 101 chr10 4493140 4493328 -135823437 + L1MEc LINE L1 2209 2378 -4018 367 268 87 0 chr10 4493454 4493581 -135823184 - MLT1F1 LTR MaLR -428 139 2 21 0 0 0 chr10 4494598 4494619 -135822146 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr10 4495534 4495560 -135821205 + AT_rich Low_complexity Low_complexity 1 26 0 886 205 13 0 chr10 4496015 4496171 -135820594 - AluJo SINE Alu -147 165 8 21 0 0 0 chr10 4498228 4498249 -135818516 + AT_rich Low_complexity Low_complexity 1 21 0 396 0 0 0 chr10 4498285 4498329 -135818436 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 232 313 56 49 chr10 4501995 4502139 -135814626 - MIR SINE MIR -21 241 97 266 256 13 13 chr10 4502292 4502370 -135814395 + MIR SINE MIR 184 261 -1 352 240 16 33 chr10 4502908 4503029 -135813736 - L1MC4a LINE L1 -1875 5933 5815 219 328 0 0 chr10 4503061 4503119 -135813646 - L2 LINE L2 -4 3268 3211 498 203 105 28 chr10 4503427 4503570 -135813195 + MER50 LTR ERV1 10 163 -571 1142 127 35 119 chr10 4504270 4504640 -135812125 + THE1C LTR MaLR 37 375 0 3578 156 9 9 chr10 4505861 4506690 -135810075 + L1PA13 LINE L1 5053 5882 -281 233 296 12 12 chr10 4507666 4507747 -135809018 + CT-rich Low_complexity Low_complexity 1 81 0 414 0 0 0 chr10 4507749 4507795 -135808970 + (CA)n Simple_repeat Simple_repeat 2 47 0 242 353 69 40 chr10 4508107 4508280 -135808485 - L2 LINE L2 -1408 1906 1729 207 100 0 0 chr10 4509258 4509288 -135807477 + (TG)n Simple_repeat Simple_repeat 2 31 0 638 138 88 6 chr10 4509404 4509564 -135807201 + L1MCa LINE L1 2280 2452 -3974 * 2747 166 27 27 chr10 4509561 4510089 -135806676 + L1MC1 LINE L1 5787 6317 -16 2445 55 0 21 chr10 4510089 4510404 -135806361 + L1PA8 LINE L1 5851 6169 -3 2747 166 27 27 chr10 4510404 4510422 -135806343 + L1MC1 LINE L1 6316 6333 0 36 23 0 0 chr10 4510687 4510730 -135806035 + AT_rich Low_complexity Low_complexity 1 43 0 2247 115 0 0 chr10 4511206 4511502 -135805263 - AluSq SINE Alu -17 296 1 1780 109 15 40 chr10 4512218 4512515 -135804250 + AluSq SINE Alu 47 336 0 2197 225 79 63 chr10 4512806 4513641 -135803124 - L1ME2 LINE L1 -34 6130 5283 2111 81 14 3 chr10 4513720 4514016 -135802749 - L1PA8 LINE L1 -5 6167 5869 1738 65 4 0 chr10 4514016 4514245 -135802520 + L1PA8 LINE L1 5648 5877 -295 210 80 60 20 chr10 4514263 4514313 -135802452 + (TA)n Simple_repeat Simple_repeat 1 52 0 600 276 123 78 chr10 4514323 4516282 -135800483 - L1ME LINE L1 -3550 2832 796 1347 247 7 3 chr10 4516355 4516638 -135800127 - AluJo SINE Alu -22 290 7 328 348 70 43 chr10 4517415 4517645 -135799120 - MIR SINE MIR -3 259 24 25 0 0 0 chr10 4518759 4518784 -135797981 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr10 4519171 4519200 -135797565 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr10 4520362 4520386 -135796379 + AT_rich Low_complexity Low_complexity 1 24 0 962 216 96 45 chr10 4520748 4520776 -135795989 + Charlie2 DNA MER1_type 2307 2332 -530 2219 119 12 3 chr10 4520776 4521119 -135795646 + L1PB1 LINE L1 5806 6151 0 962 216 96 45 chr10 4521119 4521538 -135795227 + Charlie2 DNA MER1_type 2332 2777 -85 1013 220 110 38 chr10 4521969 4522396 -135794369 - MLT1C LTR MaLR -4 463 6 406 242 37 58 chr10 4523460 4523650 -135793115 + Charlie2 DNA MER1_type 2596 2781 -81 655 176 25 17 chr10 4524535 4524654 -135792111 + FLAM_C SINE Alu 2 121 -12 1061 159 0 17 chr10 4524746 4524922 -135791843 + FRAM SINE Alu 4 176 0 406 318 38 30 chr10 4526373 4526609 -135790156 + MIR SINE MIR 24 261 -1 1728 156 0 73 chr10 4527059 4527373 -135789392 + AluJb SINE Alu 1 291 -21 395 16 62 0 chr10 4527373 4527437 -135789328 + (TA)n Simple_repeat Simple_repeat 2 69 0 317 277 39 0 chr10 4527451 4527581 -135789184 + L1ME4a LINE L1 5751 5885 -236 267 224 20 20 chr10 4527610 4527757 -135789008 + GA-rich Low_complexity Low_complexity 2 148 0 1853 93 0 19 chr10 4529721 4529990 -135786775 - L1PA8 LINE L1 -2 6170 5907 243 0 0 0 chr10 4530106 4530133 -135786632 + (CA)n Simple_repeat Simple_repeat 1 27 0 2233 86 0 20 chr10 4530297 4530599 -135786166 + AluY SINE Alu 1 296 -15 712 181 12 0 chr10 4531189 4531360 -135785405 + GA-rich Low_complexity Low_complexity 4 176 0 261 0 0 0 chr10 4531438 4531467 -135785298 + (TG)n Simple_repeat Simple_repeat 1 29 0 1986 110 0 7 chr10 4531665 4532002 -135784763 - AluSc SINE Alu 0 335 1 284 291 101 34 chr10 4532364 4532543 -135784222 - LTR33 LTR ERVL -78 443 253 294 299 162 25 chr10 4532551 4532835 -135783930 - ERVL LTR ERVL -865 4899 4577 402 254 134 69 chr10 4532943 4533175 -135783590 - MLT1H LTR MaLR -197 352 106 377 264 110 61 chr10 4533231 4533585 -135783180 - L1M4 LINE L1 -2486 3660 3280 2124 122 3 0 chr10 4533585 4533879 -135782886 - AluSx SINE Alu -17 295 1 377 264 110 61 chr10 4533879 4533952 -135782813 - L1M4 LINE L1 -2866 3280 3212 594 313 37 49 chr10 4534104 4534430 -135782335 + L3 LINE CR1 1139 1460 -117 4330 233 57 27 chr10 4534453 4535814 -135780951 + Charlie1a DNA MER1_type 39 1439 -16 201 337 22 11 chr10 4536895 4536987 -135779778 - L2 LINE L2 -1 3271 3179 369 189 82 61 chr10 4537820 4538016 -135778749 + Charlie1 DNA MER1_type 2471 2670 -91 * 773 192 87 9 chr10 4538010 4538239 -135778526 + Charlie5 DNA MER1_type 2330 2576 -36 2639 179 12 0 chr10 4538341 4538832 -135777933 + LOR1a LTR ERV1 1 497 0 22 88 0 0 chr10 4539364 4539421 -135777344 + AT_rich Low_complexity Low_complexity 1 57 0 37 39 0 0 chr10 4539579 4539630 -135777135 + AT_rich Low_complexity Low_complexity 1 51 0 484 291 91 25 chr10 4542069 4542386 -135774379 + L1ME LINE L1 5317 5661 -460 183 114 0 0 chr10 4543601 4543636 -135773129 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 2555 162 36 0 chr10 4544780 4545225 -135771540 + LOR1b LTR ERV1 1 461 0 311 316 0 38 chr10 4547079 4547158 -135769607 - MIR SINE MIR -178 84 9 2291 144 58 16 chr10 4549978 4550408 -135766357 + L1PB3 LINE L1 5707 6154 0 44 20 0 0 chr10 4551516 4551567 -135765198 + AT_rich Low_complexity Low_complexity 1 51 0 367 189 38 13 chr10 4552028 4552187 -135764578 + (TA)n Simple_repeat Simple_repeat 1 163 0 1286 220 55 52 chr10 4552197 4552560 -135764205 - MLT2D LTR ERVL -40 374 11 842 210 66 0 chr10 4553483 4553664 -135763101 - LTR26 LTR ERV1 0 603 411 958 287 22 0 chr10 4553939 4554214 -135762551 - MER45C DNA AcHobo -671 282 2 1793 180 91 29 chr10 4556777 4557194 -135759571 - MSTB2 LTR MaLR 0 457 15 1547 93 23 0 chr10 4560471 4560687 -135756078 - L1PA13 LINE L1 -4 6159 5939 2174 128 0 6 chr10 4560778 4561090 -135755675 + AluSx SINE Alu 1 310 -2 207 191 0 0 chr10 4561096 4561143 -135755622 + A-rich Low_complexity Low_complexity 1 47 0 374 238 115 46 chr10 4561261 4561522 -135755243 - L1MC5 LINE L1 -51 7910 7632 1248 79 0 0 chr10 4561524 4561676 -135755089 + AluSp/q SINE Alu 154 305 -8 2375 101 3 0 chr10 4562811 4563119 -135753646 + AluSp SINE Alu 1 309 -4 22 35 0 0 chr10 4563719 4563748 -135753017 + AT_rich Low_complexity Low_complexity 1 29 0 943 234 49 19 chr10 4563757 4564131 -135752634 - L1ME1 LINE L1 -19 6643 6238 641 269 92 8 chr10 4564127 4564365 -135752400 - L1ME1 LINE L1 -1221 5423 5166 * 1326 271 42 17 chr10 4564348 4564943 -135751822 - L1ME1 LINE L1 -2890 3754 3145 3000 258 45 45 chr10 4564953 4566010 -135750755 - L1ME1 LINE L1 -5458 1084 29 794 243 42 58 chr10 4566024 4566402 -135750363 - L1M4 LINE L1 -1377 4769 4398 26 0 0 0 chr10 4566408 4566434 -135750331 + AT_rich Low_complexity Low_complexity 1 26 0 669 165 177 0 chr10 4566435 4566593 -135750172 - L1MA8 LINE L1 -3 6288 6103 * 3347 160 29 7 chr10 4566591 4567646 -135749119 - L1MA8 LINE L1 -429 5883 4813 500 245 76 81 chr10 4567636 4567870 -135748895 - L1MDa LINE L1 -3890 2650 2417 * 1004 283 32 58 chr10 4567870 4568270 -135748495 + MLT1B LTR MaLR 1 390 0 500 245 76 81 chr10 4568270 4568503 -135748262 - L1MDa LINE L1 -4123 2417 2185 687 39 39 0 chr10 4568503 4568605 -135748160 + (TCTA)n Simple_repeat Simple_repeat 4 109 0 500 245 76 81 chr10 4568605 4568715 -135748050 - L1MDa LINE L1 -4355 2185 2076 1681 147 0 41 chr10 4568715 4569044 -135747721 - AluJb SINE Alu 0 319 3 500 245 76 81 chr10 4569044 4569195 -135747570 - L1MDa LINE L1 -4464 2076 1929 222 91 0 0 chr10 4569620 4569653 -135747112 + (TATG)n Simple_repeat Simple_repeat 3 35 0 23 0 0 0 chr10 4569854 4569877 -135746888 + AT_rich Low_complexity Low_complexity 1 23 0 381 205 0 12 chr10 4571323 4571406 -135745359 + HERVL LTR ERVL 4521 4602 -1052 1891 179 61 47 chr10 4571407 4571831 -135744934 - MSTB1 LTR MaLR 0 432 3 896 265 105 41 chr10 4571840 4572140 -135744625 + HERVL LTR ERVL 4643 4971 -793 975 244 55 88 chr10 4572140 4572525 -135744240 - MLT1A2 LTR MaLR -2 372 1 896 265 105 41 chr10 4572525 4572586 -135744179 + HERVL LTR ERVL 4971 5027 -737 2054 135 0 0 chr10 4573015 4573297 -135743468 + AluSc SINE Alu 1 282 -27 198 0 0 0 chr10 4573297 4573319 -135743446 + (TA)n Simple_repeat Simple_repeat 2 23 0 36 40 0 0 chr10 4573377 4573427 -135743338 + AT_rich Low_complexity Low_complexity 1 50 0 1006 250 14 0 chr10 4573702 4573914 -135742851 + MER58A DNA MER1_type 2 216 -8 286 132 15 29 chr10 4574074 4574142 -135742623 + CT-rich Low_complexity Low_complexity 4 70 0 598 234 140 27 chr10 4574265 4574522 -135742243 - L1M4 LINE L1 -3428 2718 2433 346 281 22 15 chr10 4574933 4575068 -135741697 + MIR SINE MIR 65 200 -62 1849 155 13 26 chr10 4575448 4575757 -135741008 - AluSx SINE Alu -6 306 2 24 0 0 0 chr10 4575878 4575902 -135740863 + AT_rich Low_complexity Low_complexity 1 24 0 2128 120 3 0 chr10 4576283 4576583 -135740182 + AluSx SINE Alu 1 301 -11 215 281 53 0 chr10 4576722 4576779 -135739986 + MIR SINE MIR 25 84 -178 2478 86 0 9 chr10 4577206 4577521 -135739244 + AluSq SINE Alu 2 313 0 272 222 9 0 chr10 4578330 4578438 -135738327 + (TG)n Simple_repeat Simple_repeat 1 109 0 396 271 0 0 chr10 4578473 4578643 -135738122 + (TG)n Simple_repeat Simple_repeat 2 171 0 1887 132 184 8 chr10 4578698 4579062 -135737703 - MSTA LTR MaLR 0 428 1 2270 89 0 0 chr10 4579240 4579544 -135737221 + AluY SINE Alu 1 304 0 200 303 26 0 chr10 4580917 4580993 -135735772 + MIR SINE MIR 184 261 -1 2317 107 0 0 chr10 4582120 4582411 -135734354 - AluSg SINE Alu -19 291 1 4008 210 35 79 chr10 4584540 4584653 -135732112 + L1MC/D LINE L1 4054 4170 -2028 2351 105 0 0 chr10 4584653 4584957 -135731808 + AluSg SINE Alu 1 304 -6 4008 210 35 79 chr10 4584957 4585954 -135730811 + L1MC/D LINE L1 4170 5073 -1125 1338 115 5 0 chr10 4585954 4586154 -135730611 - L1PB2 LINE L1 -2 6149 5949 4008 210 35 79 chr10 4586154 4586521 -135730244 + L1MC/D LINE L1 5073 5455 -743 208 283 75 17 chr10 4586752 4586872 -135729893 + L2 LINE L2 3146 3272 0 37 0 0 0 chr10 4588085 4588122 -135728643 + GC_rich Low_complexity Low_complexity 1 37 0 182 296 91 0 chr10 4588596 4588684 -135728081 - L2 LINE L2 -914 2400 2305 278 316 0 13 chr10 4588786 4588862 -135727903 + MER119 DNA MER1_type 2 76 -507 1165 172 39 19 chr10 4588865 4589121 -135727644 + L1ME3A LINE L1 5357 5617 -561 758 227 35 10 chr10 4589844 4590042 -135726723 - L1MA6 LINE L1 -155 6145 5943 258 207 2 32 chr10 4590248 4590311 -135726454 - MIR SINE MIR -87 121 59 214 330 35 26 chr10 4590721 4590836 -135725929 - MIR SINE MIR -56 152 37 991 134 0 0 chr10 4591392 4591534 -135725231 + AluSg/x SINE Alu 166 307 -5 2334 105 0 0 chr10 4592765 4593059 -135723706 + AluSg SINE Alu 1 294 -16 4627 134 89 66 chr10 4594126 4595568 -135721197 + pTR5 LTR ERV1 66 2438 0 194 297 195 0 chr10 4596254 4596372 -135720393 - MIR SINE MIR -17 245 105 254 314 57 0 chr10 4596699 4596804 -135719961 + MLT1J1 LTR MaLR 1 111 -335 402 261 137 12 chr10 4596814 4596975 -135719790 + MLT1J2 LTR MaLR 156 336 -114 233 222 269 19 chr10 4597915 4598023 -135718742 - L1ME4a LINE L1 0 6121 5987 182 328 0 0 chr10 4598357 4598415 -135718350 - L2 LINE L2 0 3272 3215 395 332 156 17 chr10 4598664 4599016 -135717749 - L2 LINE L2 -42 3230 2830 209 321 138 0 chr10 4599277 4599386 -135717379 - L2 LINE L2 -793 2521 2398 648 294 66 45 chr10 4600109 4600398 -135716367 + L2 LINE L2 3019 3313 0 394 264 40 34 chr10 4600912 4601060 -135715705 + L1ME3A LINE L1 5995 6143 -27 655 233 87 36 chr10 4601114 4601333 -135715432 + L1ME3A LINE L1 5707 5936 -234 343 231 154 15 chr10 4601377 4601507 -135715258 + L1ME3A LINE L1 6020 6167 -3 189 318 102 0 chr10 4602278 4602382 -135714383 + MIR SINE MIR 18 135 -73 28 0 0 0 chr10 4603514 4603542 -135713223 + AT_rich Low_complexity Low_complexity 1 28 0 221 0 35 0 chr10 4603959 4603988 -135712777 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 259 240 144 89 chr10 4603993 4604139 -135712626 + MIR3 SINE MIR 39 192 -16 570 288 0 0 chr10 4604946 4605078 -135711687 + MIR SINE MIR 103 234 -28 265 258 148 13 chr10 4605913 4606068 -135710697 - MIR3 SINE MIR -16 192 17 234 105 0 0 chr10 4606843 4606881 -135709884 + (TAAAG)n Simple_repeat Simple_repeat 2 39 0 313 248 44 58 chr10 4606933 4607070 -135709695 + L1ME4a LINE L1 5962 6096 -25 251 309 74 19 chr10 4607336 4607495 -135709270 - MIR3 SINE MIR -25 183 8 2525 121 3 3 chr10 4607922 4608286 -135708479 + THE1B LTR MaLR 1 364 0 348 247 37 0 chr10 4608355 4608436 -135708329 - MER5A DNA MER1_type -68 121 38 229 268 71 0 chr10 4608461 4608517 -135708248 + L2 LINE L2 3162 3221 -51 232 277 84 12 chr10 4609537 4609620 -135707145 - MIR SINE MIR -70 192 104 321 283 121 39 chr10 4609624 4611069 -135705696 + L1M4 LINE L1 3051 4677 -1469 245 216 0 0 chr10 4611079 4611130 -135705635 + L1ME2 LINE L1 6072 6122 -42 193 373 56 32 chr10 4611762 4611888 -135704877 - L2 LINE L2 -5 3267 3139 997 203 30 70 chr10 4612087 4612417 -135704348 + L1MA7 LINE L1 5961 6277 -14 1880 144 7 0 chr10 4612506 4612812 -135703953 - AluJo SINE Alu -4 308 1 277 238 16 16 chr10 4613391 4613454 -135703311 - L2 LINE L2 -9 3263 3201 1965 132 0 0 chr10 4613468 4613741 -135703024 + AluSx SINE Alu 39 311 -1 1051 262 122 10 chr10 4614336 4614741 -135702024 + L1MC/D LINE L1 3742 4213 -1933 282 29 0 0 chr10 4614741 4614776 -135701989 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1051 262 122 10 chr10 4614776 4614863 -135701902 + L1MC/D LINE L1 4213 4289 -1857 2423 86 0 0 chr10 4614890 4615191 -135701574 + AluSc SINE Alu 3 303 -6 1413 193 45 0 chr10 4615194 4615458 -135701307 + AluJo SINE Alu 1 276 -36 288 0 0 0 chr10 4615468 4615500 -135701265 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 2538 240 51 22 chr10 4615500 4616207 -135700558 + L1MC/D LINE L1 4321 5071 -1249 5224 82 1 0 chr10 4616207 4616900 -135699865 - L1PA8A LINE L1 -12 6119 5426 2538 240 51 22 chr10 4616900 4617420 -135699345 + L1MC/D LINE L1 5071 5575 -745 321 89 0 0 chr10 4620434 4620479 -135696286 + (CA)n Simple_repeat Simple_repeat 2 46 0 23 0 0 0 chr10 4620648 4620671 -135696094 + AT_rich Low_complexity Low_complexity 1 23 0 1144 259 102 35 chr10 4621288 4621894 -135694871 - MER20B DNA MER1_type -90 693 47 355 320 31 73 chr10 4622004 4622457 -135694308 + L2 LINE L2 1983 2416 -898 627 207 0 0 chr10 4623070 4623210 -135693555 + (TG)n Simple_repeat Simple_repeat 1 140 0 729 246 67 56 chr10 4623342 4623713 -135693052 + Charlie4a DNA MER1_type 43 421 -1540 1588 154 75 27 chr10 4623713 4624005 -135692760 - AluJo SINE Alu -6 306 1 729 246 67 56 chr10 4624005 4624063 -135692702 + Charlie4a DNA MER1_type 421 477 -31 652 251 6 6 chr10 4624256 4624419 -135692346 + MLT1C LTR MaLR 305 467 0 2028 241 51 40 chr10 4624423 4625249 -135691516 + MLT1C-int LTR MaLR 5 884 -487 893 217 30 146 chr10 4625454 4625920 -135690845 + MLT1C-int LTR MaLR 959 1370 -1 355 185 70 135 chr10 4625927 4626127 -135690638 + MLT1C LTR MaLR 7 193 -197 281 254 77 77 chr10 4626266 4626409 -135690356 + MLT1K LTR MaLR 328 473 -115 13919 82 11 1 chr10 4626409 4629104 -135687661 + L1PA7 LINE L1 3440 6154 0 281 254 77 77 chr10 4629104 4629180 -135687585 + MLT1K LTR MaLR 472 547 -41 188 336 40 24 chr10 4629363 4629488 -135687277 - MIR3 SINE MIR -43 165 39 920 9 0 0 chr10 4629743 4629848 -135686917 + L1PA3 LINE L1 6050 6154 -1 207 204 0 0 chr10 4629862 4629906 -135686859 + A-rich Low_complexity Low_complexity 1 44 0 441 273 239 14 chr10 4629933 4630222 -135686543 - L2 LINE L2 0 3272 2919 2575 47 0 22 chr10 4630946 4631264 -135685501 + AluY SINE Alu 1 311 0 2667 206 8 2 chr10 4631408 4631936 -135684829 + MER41D LTR ERV1 1 531 -26 26 0 0 0 chr10 4631979 4632005 -135684760 + AT_rich Low_complexity Low_complexity 1 26 0 227 152 0 0 chr10 4632338 4632384 -135684381 - L1ME3 LINE L1 -7 6155 6110 2393 255 129 27 chr10 4632453 4634648 -135682117 - L1ME3 LINE L1 -197 5967 3497 316 171 103 51 chr10 4634767 4634884 -135681881 - L1ME3 LINE L1 -2863 3283 3161 487 265 10 25 chr10 4634887 4635091 -135681674 - L1ME3 LINE L1 -3090 3056 2856 233 238 25 0 chr10 4635189 4635269 -135681496 - L1ME3 LINE L1 -3227 2919 2838 2119 117 10 13 chr10 4635426 4635733 -135681032 - AluSx SINE Alu -2 310 5 21 0 0 0 chr10 4638145 4638166 -135678599 + AT_rich Low_complexity Low_complexity 1 21 0 506 255 93 32 chr10 4638682 4638929 -135677836 - MIR SINE MIR 0 262 1 192 394 0 14 chr10 4641347 4641418 -135675347 - L2 LINE L2 -86 3186 3117 334 228 196 19 chr10 4643035 4643193 -135673572 - MER5A DNA MER1_type 0 189 4 7924 232 65 52 chr10 4644405 4645038 -135671727 - L1MC3 LINE L1 -2 7783 7160 1450 58 0 0 chr10 4645038 4645209 -135671556 + AluY SINE Alu 1 171 -140 251 91 0 0 chr10 4645210 4645273 -135671492 + AluY SINE Alu 253 315 0 7924 232 65 52 chr10 4645273 4647105 -135669660 - L1MC3 LINE L1 -625 7160 5353 1996 131 40 0 chr10 4647105 4647279 -135669486 - AluSx SINE Alu -3 309 117 270 0 0 0 chr10 4647279 4647309 -135669456 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1996 131 40 0 chr10 4647309 4647431 -135669334 - AluSx SINE Alu -195 117 1 7924 232 65 52 chr10 4647431 4647783 -135668982 - L1MC3 LINE L1 -2432 5353 5007 1230 138 20 5 chr10 4647783 4647986 -135668779 - L1PB1 LINE L1 -1 6150 5945 7924 232 65 52 chr10 4647986 4649291 -135667474 - L1MC3 LINE L1 -2778 5007 3564 895 232 34 0 chr10 4649398 4649661 -135667104 + L1MA4 LINE L1 6025 6296 -4 290 240 145 70 chr10 4649818 4650018 -135666747 - HAL1 LINE L1 -2288 219 5 233 239 128 60 chr10 4650976 4651093 -135665672 + MER69 DNA AcHobo 1 125 -2401 25 0 0 0 chr10 4652684 4652709 -135664056 + AT_rich Low_complexity Low_complexity 1 25 0 205 202 0 146 chr10 4655297 4655386 -135661379 - L2 LINE L2 -514 2800 2725 23 33 0 0 chr10 4655604 4655634 -135661131 + AT_rich Low_complexity Low_complexity 1 30 0 288 294 15 0 chr10 4655644 4655712 -135661053 - MIR3 SINE MIR -24 184 116 248 151 0 19 chr10 4656051 4656104 -135660661 + GA-rich Low_complexity Low_complexity 1 52 0 39 38 0 0 chr10 4656717 4656770 -135659995 + AT_rich Low_complexity Low_complexity 1 53 0 238 210 110 60 chr10 4657701 4657801 -135658964 + MIR3 SINE MIR 83 187 -21 674 239 54 84 chr10 4657877 4658212 -135658553 - MER46C DNA MER2_type -13 325 1 1716 189 20 3 chr10 4658624 4658974 -135657791 - MER89 LTR ERV1 -4 555 200 766 192 26 6 chr10 4658997 4659153 -135657612 - FRAM SINE Alu -17 159 1 1253 278 91 25 chr10 4660272 4660757 -135656008 - LTR40a LTR ERVL 0 519 3 278 231 0 0 chr10 4660762 4660814 -135655951 - HERVL40 LTR ERVL -35 5495 5444 276 291 110 8 chr10 4660967 4661094 -135655671 + MER58B DNA MER1_type 199 338 -3 349 102 169 0 chr10 4661614 4661673 -135655092 - MER85 DNA T2_type -66 73 5 493 291 89 11 chr10 4661675 4661854 -135654911 + HERVL40 LTR ERVL 1219 1411 -4119 420 20 0 0 chr10 4662030 4662079 -135654686 + MER85 DNA T2_type 89 137 -2 1902 138 22 38 chr10 4663305 4663627 -135653138 - L1MB3 LINE L1 -4 6179 5862 2104 109 3 0 chr10 4663627 4663920 -135652845 + AluSx SINE Alu 1 294 -18 1902 138 22 38 chr10 4663920 4663966 -135652799 - L1MB3 LINE L1 -321 5862 5817 204 355 16 32 chr10 4666169 4666293 -135650472 - MIR SINE MIR -112 150 29 2366 116 16 13 chr10 4666401 4666773 -135649992 + THE1C LTR MaLR 3 375 0 381 158 0 0 chr10 4671310 4671392 -135645373 + GA-rich Low_complexity Low_complexity 2 83 0 23 0 0 0 chr10 4672382 4672405 -135644360 + AT_rich Low_complexity Low_complexity 1 23 0 3727 143 40 22 chr10 4672407 4673127 -135643638 - L1MA7 LINE L1 -3 6288 5556 2821 293 52 52 chr10 4673135 4674545 -135642220 - L1M3b LINE L1 -4870 1411 1 1392 257 84 53 chr10 4675969 4677089 -135639676 + L1MB7 LINE L1 2 1334 -5208 1238 219 23 23 chr10 4677092 4677394 -135639371 + MER21B-int LTR ERV1 3848 4149 -42 3334 236 47 20 chr10 4677469 4678299 -135638466 + MER21B LTR ERV1 1 852 -11 2063 236 36 51 chr10 4678308 4679089 -135637676 + L1MB7 LINE L1 1325 2093 -4553 258 32 0 0 chr10 4679120 4679151 -135637614 + (TG)n Simple_repeat Simple_repeat 2 32 0 192 77 0 0 chr10 4679150 4679176 -135637589 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 875 228 0 0 chr10 4679247 4679414 -135637351 - MLT2C1 LTR ERVL -61 336 170 3972 205 59 19 chr10 4679415 4680377 -135636388 + L1MC2 LINE L1 5344 6344 0 3726 230 40 37 chr10 4680368 4680975 -135635790 + L1MB7 LINE L1 5186 5789 -893 * 1973 129 7 14 chr10 4680975 4681270 -135635495 + AluSx SINE Alu 7 299 -13 3726 230 40 37 chr10 4681270 4682119 -135634646 + L1MB7 LINE L1 5789 6662 -20 30 45 0 0 chr10 4682722 4682766 -135633999 + AT_rich Low_complexity Low_complexity 1 44 0 684 209 19 28 chr10 4685559 4685770 -135630995 - Charlie5 DNA MER1_type -15 2597 2389 246 105 0 0 chr10 4685783 4685821 -135630944 + (TA)n Simple_repeat Simple_repeat 1 38 0 424 251 123 25 chr10 4686150 4686385 -135630380 - LTR16A LTR ERVL -161 289 32 428 220 10 0 chr10 4686446 4686546 -135630219 + L1MA9 LINE L1 6047 6147 -165 942 76 52 6 chr10 4686566 4686738 -135630027 + GA-rich Low_complexity Low_complexity 1 180 0 267 79 0 0 chr10 4686738 4686776 -135629989 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 301 215 118 0 chr10 4686799 4686892 -135629873 + L1MA9 LINE L1 6170 6273 -39 261 315 55 20 chr10 4688065 4688211 -135628554 + MLT1L LTR MaLR 465 615 0 25 0 0 0 chr10 4688318 4688343 -135628422 + AT_rich Low_complexity Low_complexity 1 25 0 26 64 0 0 chr10 4689038 4689085 -135627680 + AT_rich Low_complexity Low_complexity 1 47 0 1927 156 0 10 chr10 4689139 4689440 -135627325 - AluJb SINE Alu -14 298 1 2236 156 46 5 chr10 4689465 4689876 -135626889 + MSTA LTR MaLR 1 428 0 350 290 194 53 chr10 4689876 4690535 -135626230 + L1M4 LINE L1 2735 3486 -2660 4881 138 32 43 chr10 4690639 4691548 -135625217 - MER49 LTR ERV1 -24 899 1 1907 239 102 47 chr10 4691692 4692094 -135624671 - L1MC4 LINE L1 -343 7699 7320 1951 143 50 34 chr10 4692094 4692452 -135624313 + THE1B LTR MaLR 1 364 0 1907 239 102 47 chr10 4692452 4692788 -135623977 - L1MC4 LINE L1 -722 7320 6921 22 35 0 0 chr10 4692790 4692819 -135623946 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr10 4693123 4693152 -135623613 + AT_rich Low_complexity Low_complexity 1 29 0 28 0 0 0 chr10 4695310 4695338 -135621427 + AT_rich Low_complexity Low_complexity 1 28 0 7659 33 3 1 chr10 4695338 4696268 -135620497 - L1PA3 LINE L1 -3 6152 5210 544 295 108 38 chr10 4696532 4696901 -135619864 - L2 LINE L2 0 3313 2919 382 264 9 9 chr10 4696966 4697076 -135619689 + L2 LINE L2 2154 2263 -1051 959 134 210 0 chr10 4697262 4697448 -135619317 + AluSp SINE Alu 83 307 -6 1423 158 36 43 chr10 4698480 4698759 -135618006 - AluJo SINE Alu -19 293 17 369 320 51 37 chr10 4699672 4699804 -135616961 - L1ME LINE L1 -338 5783 5654 2193 96 4 0 chr10 4699804 4700112 -135616653 - AluSg SINE Alu 0 309 1 369 320 51 37 chr10 4700112 4700272 -135616493 - L1ME LINE L1 -467 5654 5486 22 0 0 0 chr10 4700342 4700364 -135616401 + AT_rich Low_complexity Low_complexity 1 22 0 396 252 176 25 chr10 4700769 4700928 -135615837 - MIR SINE MIR -4 258 76 236 260 39 0 chr10 4701042 4701119 -135615646 - MER116 DNA Mariner 0 80 1 23 78 0 0 chr10 4701146 4701197 -135615568 + AT_rich Low_complexity Low_complexity 1 51 0 1467 280 83 26 chr10 4701293 4702050 -135614715 + L1M4 LINE L1 3758 4557 -1589 282 303 92 26 chr10 4702769 4702921 -135613844 - HERV16 LTR ERVL -3819 1177 1016 297 326 64 35 chr10 4703287 4703459 -135613306 - MIR SINE MIR -71 191 15 298 319 6 75 chr10 4703715 4703875 -135612890 + MER5A DNA MER1_type 35 183 -6 189 107 0 0 chr10 4706599 4706627 -135610138 + (T)n Simple_repeat Simple_repeat 1 28 0 272 260 250 0 chr10 4707314 4707414 -135609351 - L2 LINE L2 0 3313 3189 29 28 0 0 chr10 4707648 4707684 -135609081 + AT_rich Low_complexity Low_complexity 1 36 0 363 282 99 42 chr10 4708057 4708199 -135608566 - MER5B DNA MER1_type -27 151 2 447 263 67 89 chr10 4710291 4710750 -135606015 - MLT1E LTR MaLR -101 534 1 1301 270 20 5 chr10 4710750 4711154 -135605611 + L1M4 LINE L1 3718 4127 -2019 852 167 0 0 chr10 4711156 4711282 -135605483 + AluJb SINE Alu 164 289 -23 445 234 138 5 chr10 4711289 4711477 -135605288 + L1M4 LINE L1 4626 4838 -1308 228 284 75 75 chr10 4711721 4711855 -135604910 + MLT1H LTR MaLR 400 533 -16 192 77 0 0 chr10 4712383 4712409 -135604356 + (A)n Simple_repeat Simple_repeat 1 26 0 4361 164 73 32 chr10 4712953 4713839 -135602926 + MER49 LTR ERV1 1 923 0 401 282 34 0 chr10 4713965 4714024 -135602741 - L1MA10 LINE L1 -1 6333 6275 1371 258 38 21 chr10 4714024 4714500 -135602265 - L1ME1 LINE L1 -54 6112 5629 697 207 14 7 chr10 4714523 4714663 -135602102 + MLT1A1 LTR MaLR 1 141 -224 2262 51 0 0 chr10 4714694 4714970 -135601795 - L1PA5 LINE L1 -13 6141 5866 1435 64 30 0 chr10 4714970 4715173 -135601592 + L1P LINE L1 5195 5403 -743 1334 160 26 0 chr10 4715183 4715414 -135601351 + MLT1A1 LTR MaLR 127 363 -2 305 303 111 25 chr10 4715414 4715576 -135601189 - L1ME1 LINE L1 -547 5615 5440 947 198 70 107 chr10 4715585 4715777 -135600988 - L1ME1 LINE L1 -1117 5029 4831 864 181 45 77 chr10 4715777 4715998 -135600767 + MER20 DNA MER1_type 2 215 -4 947 198 70 107 chr10 4715998 4716234 -135600531 - L1ME1 LINE L1 -1315 4831 4617 6233 258 52 34 chr10 4716240 4716643 -135600122 - L1M4 LINE L1 -1300 4846 4452 1580 194 0 14 chr10 4716643 4716927 -135599838 - AluJo SINE Alu -32 280 1 6233 258 52 34 chr10 4716927 4719207 -135597558 - L1M4 LINE L1 -1694 4452 2113 1060 303 125 8 chr10 4719224 4720177 -135596588 - L1MDa LINE L1 -5313 1227 20 367 151 40 0 chr10 4720698 4720824 -135595941 + (TA)n Simple_repeat Simple_repeat 2 132 0 3795 152 102 67 chr10 4720824 4721695 -135595070 + MER21A LTR ERV1 13 914 -17 34 42 0 0 chr10 4722023 4722071 -135594694 + AT_rich Low_complexity Low_complexity 1 48 0 189 195 0 0 chr10 4723100 4723141 -135593624 + (TG)n Simple_repeat Simple_repeat 2 42 0 379 257 36 12 chr10 4723227 4723455 -135593310 + L1ME LINE L1 1352 1747 -4951 1064 240 86 17 chr10 4723484 4723911 -135592854 + L1ME LINE L1 5813 6286 -675 189 0 0 0 chr10 4723911 4723932 -135592833 + (TTAAA)n Simple_repeat Simple_repeat 5 25 0 1064 240 86 17 chr10 4723932 4724142 -135592623 + L1ME LINE L1 6286 6480 -481 1663 168 44 3 chr10 4724220 4724757 -135592008 + LTR26 LTR ERV1 1 603 0 1948 241 109 21 chr10 4724771 4725403 -135591362 - MER76 LTR ERV 0 688 1 23 0 0 0 chr10 4727313 4727336 -135589429 + AT_rich Low_complexity Low_complexity 1 23 0 261 218 0 0 chr10 4727902 4727957 -135588808 + C-rich Low_complexity Low_complexity 1 55 0 447 150 0 0 chr10 4728123 4728203 -135588562 + L1MA3 LINE L1 6226 6305 0 2227 116 0 19 chr10 4730052 4730371 -135586394 + AluSq SINE Alu 1 313 0 410 355 133 33 chr10 4730856 4731617 -135585148 - L2 LINE L2 -411 2903 2067 2054 221 12 0 chr10 4731851 4732250 -135584515 - LTR57 LTR ERVL 0 411 8 1558 275 67 28 chr10 4732482 4733587 -135583178 + L1MCc LINE L1 1215 2563 -4559 2117 201 21 23 chr10 4733590 4734122 -135582643 - L1MA9 LINE L1 -1 6311 5781 1333 268 47 32 chr10 4734122 4734379 -135582386 + L1MCc LINE L1 2863 3115 -3826 683 216 31 0 chr10 4734379 4734541 -135582224 + L1MB7 LINE L1 6010 6176 -8 1333 268 47 32 chr10 4734541 4735142 -135581623 + L1MCc LINE L1 3115 3698 -3243 3921 189 15 11 chr10 4735874 4736615 -135580150 + L1PA13 LINE L1 1121 1864 -4923 268 299 49 56 chr10 4736651 4736795 -135579970 - MIR3 SINE MIR -65 143 1 1225 151 103 0 chr10 4738688 4738920 -135577845 - L1MA8 LINE L1 -41 6250 5995 732 161 14 21 chr10 4739590 4739733 -135577032 + FRAM SINE Alu 11 152 -24 263 48 0 48 chr10 4740370 4740412 -135576353 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 245 83 33 33 chr10 4740424 4740484 -135576281 + (TTCTCC)n Simple_repeat Simple_repeat 4 63 0 184 30 61 0 chr10 4740707 4740740 -135576025 + T-rich Low_complexity Low_complexity 1 35 0 265 196 20 0 chr10 4740960 4741011 -135575754 - MLT1G1 LTR MaLR 0 595 544 22 35 0 0 chr10 4741279 4741308 -135575457 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr10 4741334 4741376 -135575389 + AT_rich Low_complexity Low_complexity 1 42 0 255 257 0 0 chr10 4741403 4741504 -135575261 + (TG)n Simple_repeat Simple_repeat 1 101 0 265 362 0 9 chr10 4743127 4743232 -135573533 - MIR3 SINE MIR -10 198 95 2032 205 66 5 chr10 4743478 4743887 -135572878 - MER70A LTR ERVL 0 472 39 303 93 0 0 chr10 4743898 4743941 -135572824 + (TG)n Simple_repeat Simple_repeat 2 44 0 206 312 80 24 chr10 4745958 4746083 -135570682 - L2 LINE L2 -2 3311 3180 773 305 33 63 chr10 4746776 4747205 -135569560 + L2 LINE L2 2898 3313 0 211 333 0 0 chr10 4747927 4747990 -135568775 - L2 LINE L2 0 3272 3210 1738 188 7 0 chr10 4748574 4748883 -135567882 + AluJb SINE Alu 2 312 0 36 0 0 0 chr10 4750866 4750902 -135565863 + AT_rich Low_complexity Low_complexity 1 36 0 2541 44 0 0 chr10 4751470 4751766 -135564999 + AluY SINE Alu 2 297 -14 302 301 0 49 chr10 4752017 4752140 -135564625 - MIR SINE MIR -70 192 76 2377 126 30 13 chr10 4752818 4753214 -135563551 - MER57A LTR ERV1 0 403 1 214 273 13 39 chr10 4754341 4754418 -135562347 + MIR SINE MIR 66 140 -68 356 319 76 38 chr10 4755273 4755590 -135561175 - L1M4 LINE L1 -1627 4519 4191 1034 244 78 36 chr10 4755602 4756024 -135560741 - MLT1C LTR MaLR 0 467 17 881 164 56 119 chr10 4756054 4756323 -135560442 - MLT1C-int LTR MaLR -1 1370 1119 1375 294 83 45 chr10 4756326 4756933 -135559832 - L1ME LINE L1 -4600 1480 898 2128 133 3 0 chr10 4756933 4757241 -135559524 - AluSx SINE Alu -3 309 1 1375 294 83 45 chr10 4757241 4758057 -135558708 - L1ME LINE L1 -5182 898 6 34 42 0 0 chr10 4758888 4758936 -135557829 + AT_rich Low_complexity Low_complexity 1 48 0 390 245 109 43 chr10 4759557 4759741 -135557024 + MIR SINE MIR 53 248 -14 21 0 0 0 chr10 4759785 4759806 -135556959 + AT_rich Low_complexity Low_complexity 1 21 0 1883 242 7 4 chr10 4760340 4761259 -135555506 + L1MB7 LINE L1 5 1061 -5481 1671 249 54 7 chr10 4761293 4761734 -135555031 + MLT1C LTR MaLR 6 467 0 2835 251 95 41 chr10 4761739 4762494 -135554271 + L1MB7 LINE L1 1201 1913 -4731 1657 189 0 11 chr10 4762494 4762779 -135553986 + AluJb SINE Alu 1 282 -30 2835 251 95 41 chr10 4762779 4764441 -135552324 + L1MB7 LINE L1 1913 3749 -2895 1277 226 22 38 chr10 4764451 4764769 -135551996 + MLT1A1 LTR MaLR 11 323 -42 5464 224 69 39 chr10 4764789 4767610 -135549155 + L1MB7 LINE L1 3754 6659 -23 1276 168 5 23 chr10 4767623 4767843 -135548922 + AluSx SINE Alu 1 216 -96 945 140 0 0 chr10 4767843 4767993 -135548772 + AluSg/x SINE Alu 154 303 -9 196 368 58 32 chr10 4768294 4768449 -135548316 - MIR SINE MIR -39 223 65 1503 174 102 7 chr10 4769650 4769954 -135546811 + MER1B DNA MER1_type 4 336 -1 2059 126 0 0 chr10 4771333 4771619 -135545146 - AluSx SINE Alu -23 289 4 323 308 8 15 chr10 4771895 4772025 -135544740 + GA-rich Low_complexity Low_complexity 2 130 0 2146 122 10 0 chr10 4773043 4773339 -135543426 + AluSc SINE Alu 1 299 -10 6238 158 54 6 chr10 4774047 4775221 -135541544 + Tigger3b DNA MER2_type 1 1230 -1 271 219 16 65 chr10 4775256 4775379 -135541386 + (CATATA)n Simple_repeat Simple_repeat 2 118 0 349 236 0 50 chr10 4775923 4776105 -135540660 - L1ME4a LINE L1 -11 6110 5938 27 49 0 0 chr10 4776138 4776179 -135540586 + AT_rich Low_complexity Low_complexity 1 41 0 1106 228 114 17 chr10 4776795 4777155 -135539610 + MSTD LTR MaLR 1 395 -1 225 233 133 27 chr10 4777870 4778020 -135538745 + L1 LINE L1 4899 5064 -1082 21 0 0 0 chr10 4778342 4778363 -135538402 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr10 4779278 4779304 -135537461 + AT_rich Low_complexity Low_complexity 1 26 0 34 79 0 0 chr10 4779726 4779802 -135536963 + AT_rich Low_complexity Low_complexity 1 76 0 201 286 0 0 chr10 4782334 4782383 -135534382 + L2 LINE L2 3139 3187 -85 592 263 100 20 chr10 4783936 4784187 -135532578 + MLT1F1 LTR MaLR 2 272 -295 2066 103 7 35 chr10 4784452 4784762 -135532003 - AluSx SINE Alu 0 312 12 875 284 81 86 chr10 4786772 4787775 -135528990 - L2 LINE L2 -27 3286 2296 2700 160 15 6 chr10 4787880 4788355 -135528410 - MER4B LTR ERV1 0 610 132 943 309 42 32 chr10 4788621 4789483 -135527282 + L1MCa LINE L1 971 2048 -4559 2117 201 21 23 chr10 4789486 4790018 -135526747 - L1MA9 LINE L1 -1 6311 5781 1323 268 47 32 chr10 4790018 4790275 -135526490 + L1MCa LINE L1 2348 2600 -3826 683 216 31 0 chr10 4790275 4790437 -135526328 + L1MB7 LINE L1 6010 6176 -8 1323 268 47 32 chr10 4790437 4791038 -135525727 + L1MCa LINE L1 2600 3183 -3243 3973 188 13 11 chr10 4791757 4792506 -135524259 + L1PA13 LINE L1 1114 1864 -4923 268 299 49 56 chr10 4792542 4792686 -135524079 - MIR3 SINE MIR -65 143 1 1225 151 103 0 chr10 4794580 4794812 -135521953 - L1MA8 LINE L1 -41 6250 5995 748 167 7 21 chr10 4795482 4795626 -135521139 + FRAM SINE Alu 11 152 -24 22 35 0 0 chr10 4796403 4796432 -135520333 + AT_rich Low_complexity Low_complexity 1 29 0 394 261 84 14 chr10 4796563 4796705 -135520060 - MIR3 SINE MIR -33 175 24 204 97 0 0 chr10 4797373 4797404 -135519361 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 22 0 0 0 chr10 4797684 4797706 -135519059 + AT_rich Low_complexity Low_complexity 1 22 0 277 371 9 0 chr10 4798176 4798281 -135518484 - MER5A DNA MER1_type -80 109 4 352 304 76 49 chr10 4798292 4798476 -135518289 + MER5A DNA MER1_type 1 189 0 820 140 47 0 chr10 4798719 4798869 -135517896 - MER5A DNA MER1_type -22 167 11 28 29 0 0 chr10 4799376 4799411 -135517354 + AT_rich Low_complexity Low_complexity 1 35 0 984 211 122 96 chr10 4799938 4800361 -135516404 - MER66A LTR ERV1 -5 579 179 2101 147 0 0 chr10 4800361 4800673 -135516092 - AluSx SINE Alu 0 312 1 984 211 122 96 chr10 4800673 4800759 -135516006 - MER66A LTR ERV1 -405 179 97 642 296 32 20 chr10 4800825 4801166 -135515599 - L1MC/D LINE L1 -2172 5636 5292 1998 132 3 0 chr10 4801339 4801635 -135515130 + AluSc SINE Alu 1 297 -12 473 268 81 4 chr10 4801868 4802114 -135514651 - L1MC/D LINE L1 -2817 3329 3065 384 220 18 9 chr10 4802143 4802252 -135514513 + L1ME LINE L1 5000 5109 -1037 301 97 0 88 chr10 4802402 4802515 -135514250 + (TAAA)n Simple_repeat Simple_repeat 2 104 0 1606 223 26 37 chr10 4802521 4803050 -135513715 + L1ME LINE L1 5157 5683 -483 2280 82 0 22 chr10 4804616 4804961 -135511804 - L1PA8 LINE L1 -2 6170 5838 21 0 0 0 chr10 4805110 4805131 -135511634 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 4806419 4806447 -135510318 + AT_rich Low_complexity Low_complexity 1 28 0 245 322 0 11 chr10 4807486 4807576 -135509189 + (CA)n Simple_repeat Simple_repeat 1 89 0 232 233 17 0 chr10 4807728 4807788 -135508977 - MLT1G1 LTR MaLR 0 595 535 23 0 0 0 chr10 4808355 4808378 -135508387 + AT_rich Low_complexity Low_complexity 1 23 0 2221 113 7 0 chr10 4808565 4808856 -135507909 + AluSc SINE Alu 6 298 -11 296 204 12 74 chr10 4808937 4809099 -135507666 + L1MEd LINE L1 1065 1216 -4903 200 189 0 0 chr10 4809146 4809183 -135507582 + (TG)n Simple_repeat Simple_repeat 2 38 0 2286 91 0 0 chr10 4810688 4810985 -135505780 - AluY SINE Alu -14 297 1 558 269 19 31 chr10 4811735 4811988 -135504777 + MER77 LTR ERV1 450 745 -7 2087 241 55 29 chr10 4812019 4812820 -135503945 + MER77-int LTR ERV1 3261 4130 -61 1365 261 83 23 chr10 4813354 4813871 -135502894 + MER77 LTR ERV1 51 598 -7 286 288 16 16 chr10 4813881 4814006 -135502759 + L1MC4 LINE L1 7434 7558 -484 1632 169 20 30 chr10 4814840 4815141 -135501624 - AluJo SINE Alu -14 298 1 232 211 0 18 chr10 4816231 4816288 -135500477 + A-rich Low_complexity Low_complexity 3 58 0 22 0 0 0 chr10 4816514 4816536 -135500229 + AT_rich Low_complexity Low_complexity 1 22 0 13426 55 19 3 chr10 4917251 4918900 -135397865 + HERVK14 LTR ERVK 1188 2862 -3083 828 215 52 40 chr10 4918905 4919156 -135397609 - LTR13 LTR ERVK -753 254 1 74304 6 2 3 chr10 4919156 4927282 -135389483 - HERVK13 LTR ERVK 0 8116 1 3800 167 68 67 chr10 4927282 4928235 -135388530 - LTR13 LTR ERVK 0 954 1 354 264 64 9 chr10 4928456 4928566 -135388199 - U8 snRNA snRNA 0 136 21 386 308 0 9 chr10 4930322 4930429 -135386336 + MER68 LTR ERV1 347 452 -110 2213 124 3 0 chr10 4931682 4931989 -135384776 - AluSq SINE Alu -5 308 1 359 62 0 0 chr10 4932572 4932620 -135384145 - pTR5 LTR ERV1 -2046 392 345 8880 94 72 69 chr10 4932720 4935227 -135381538 - pTR5 LTR ERV1 0 8399 504 607 195 43 43 chr10 4935223 4935525 -135381240 - Harlequin LTR ERV1 -5755 1141 840 * 36997 93 21 20 chr10 4935526 4941261 -135375504 - Harlequin LTR ERV1 0 2438 17 28293 42 5 1 chr10 4941362 4944888 -135371877 - L1P2 LINE L1 -695 5460 1921 3634 255 50 32 chr10 4944869 4944965 -135371800 - L1 LINE L1 -2757 3389 3296 * 2026 127 30 10 chr10 4944965 4945265 -135371500 - AluSx SINE Alu -6 306 1 3634 255 50 32 chr10 4945265 4946815 -135369950 - L1 LINE L1 -2850 3296 1670 9009 77 4 2 chr10 4946917 4948059 -135368706 - HERVK14 LTR ERVK -4800 1145 1 2747 61 0 0 chr10 4948059 4948403 -135368362 - LTR14A LTR ERVK 0 344 1 449 260 90 57 chr10 4948421 4948775 -135367990 + L1M4c LINE L1 806 1171 -5213 1252 261 16 13 chr10 4948775 4949081 -135367684 - MST-int LTR MaLR -438 1213 907 36 23 0 0 chr10 4949370 4949413 -135367352 + AT_rich Low_complexity Low_complexity 1 43 0 26 0 0 0 chr10 4950123 4950149 -135366616 + AT_rich Low_complexity Low_complexity 1 26 0 4624 131 57 73 chr10 4950449 4951488 -135365277 + pTR5 LTR ERV1 743 2025 -413 354 172 63 81 chr10 4951488 4951599 -135365166 + LTR30 LTR ERV1 544 724 -70 561 28 42 0 chr10 4951599 4951670 -135365095 + pTR5 LTR ERV1 79 152 -2286 853 264 129 27 chr10 4951670 4951965 -135364800 + L1PA15-16 LINE L1 1237 1561 -5288 3275 244 26 14 chr10 4951995 4952999 -135363766 + L1PA15-16 LINE L1 1598 2705 -4144 33293 46 2 5 chr10 4953108 4957249 -135359516 - L1P LINE L1 -2015 4131 1 6710 204 36 34 chr10 4957249 4958737 -135358028 + HUERS-P3b LTR ERV1 4763 6255 -1163 2080 125 7 3 chr10 4958737 4959032 -135357733 + AluSx SINE Alu 1 296 -16 6710 204 36 34 chr10 4959032 4959230 -135357535 + HUERS-P3b LTR ERV1 6255 6451 -967 1922 199 10 20 chr10 4959343 4959845 -135356920 + HUERS-P3b LTR ERV1 6495 6991 -5 286 187 0 165 chr10 4959869 4959960 -135356805 + MER61E LTR ERV1 36 111 -458 * 506 74 0 25 chr10 4959940 4960021 -135356744 + LTR25 LTR ERV1 215 293 -501 2272 190 69 15 chr10 4960043 4960578 -135356187 + LTR25 LTR ERV1 244 565 -4 231 228 158 40 chr10 4960813 4960914 -135355851 + MIR SINE MIR 150 262 0 2377 87 0 0 chr10 4962321 4962619 -135354146 + AluY SINE Alu 1 298 -13 23 68 0 0 chr10 4962688 4962732 -135354033 + AT_rich Low_complexity Low_complexity 1 44 0 353 350 104 30 chr10 4962867 4963204 -135353561 - L3 LINE CR1 -621 956 595 751 290 70 35 chr10 4963640 4964103 -135352662 + MLT1E LTR MaLR 17 496 -97 1262 295 124 32 chr10 4964301 4965263 -135351502 - L2 LINE L2 -5 3308 2246 853 179 68 8 chr10 4965266 4965500 -135351265 + Tigger1 DNA MER2_type 2171 2418 0 380 276 37 29 chr10 4965515 4965758 -135351007 - L1M4c LINE L1 -3759 2885 2641 6172 190 14 4 chr10 4965827 4967133 -135349632 + L1P5 LINE L1 3795 5114 -1032 29 28 0 0 chr10 4967133 4967169 -135349596 + AT_rich Low_complexity Low_complexity 1 36 0 226 277 0 0 chr10 4967169 4967252 -135349513 + L1 LINE L1 2305 2387 -3759 7918 248 43 7 chr10 4967255 4967836 -135348929 + L1PA16 LINE L1 2440 2999 -3157 2183 108 0 7 chr10 4967836 4968133 -135348632 + AluSg1 SINE Alu 1 295 -14 7918 248 43 7 chr10 4968133 4970532 -135346233 + L1PA16 LINE L1 2999 5534 -622 1417 252 6 6 chr10 4970580 4970945 -135345820 + L1PA16 LINE L1 5784 6148 -18 344 188 36 80 chr10 4971017 4971129 -135345636 - L1M4c LINE L1 -5505 1141 1035 285 258 27 5 chr10 4971180 4971304 -135345461 - L1M4c LINE L1 -5721 925 650 510 144 0 0 chr10 4971654 4971744 -135345021 + L1P5 LINE L1 5420 5509 -647 1966 139 36 0 chr10 4971770 4972071 -135344694 - AluSx SINE Alu 0 312 1 291 176 14 68 chr10 4972071 4972135 -135344630 - U8 snRNA snRNA -74 62 1 2396 94 0 0 chr10 4973908 4974207 -135342558 - AluSg SINE Alu -11 299 1 639 206 75 45 chr10 4974256 4974523 -135342242 - ORSL DNA AcHobo 0 275 1 469 178 22 0 chr10 4975272 4975362 -135341403 - MLT1D LTR MaLR -413 92 1 236 247 124 22 chr10 4976737 4976826 -135339939 + MIR SINE MIR 88 185 -77 202 316 158 0 chr10 4977692 4977806 -135338959 + L3 LINE CR1 1361 1492 -85 926 185 40 0 chr10 4978256 4978429 -135338336 + AluJo SINE Alu 85 264 -48 422 209 39 39 chr10 4978911 4979064 -135337701 - L1M4 LINE L1 -895 5487 5335 1468 237 95 13 chr10 4979066 4979518 -135337247 - ERVL LTR ERVL -5274 490 2 324 0 0 0 chr10 4979557 4979593 -135337172 + (TG)n Simple_repeat Simple_repeat 2 37 0 1662 203 63 5 chr10 4979604 4979641 -135337124 + Tigger1 DNA MER2_type 2018 2051 -367 216 0 0 0 chr10 4979641 4979665 -135337100 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 1662 203 63 5 chr10 4979665 4980006 -135336759 + Tigger1 DNA MER2_type 2051 2418 0 1114 245 31 36 chr10 4980045 4980271 -135336494 - L1M4 LINE L1 -3784 2598 2372 1322 212 74 15 chr10 4980271 4980596 -135336169 + MER7A DNA MER2_type 4 345 -1 1114 245 31 36 chr10 4980596 4980966 -135335799 - L1M4 LINE L1 -4010 2372 2002 2207 114 0 7 chr10 4980986 4981284 -135335481 - AluY SINE Alu -15 296 1 1522 249 10 25 chr10 4981327 4981844 -135334921 - L1M4 LINE L1 -4538 1846 1338 673 134 25 17 chr10 4981861 4981980 -135334785 - L1PA15 LINE L1 -2 6163 6044 365 88 118 0 chr10 4981980 4982030 -135334735 + L1PA15 LINE L1 6084 6159 -6 2194 147 47 37 chr10 4982146 4982575 -135334190 + LTR3b LTR ERVK 1 433 -4 12738 129 39 31 chr10 4983017 4985303 -135331462 + MER4-int LTR ERV1 3837 6140 -458 1020 208 21 62 chr10 4985343 4985680 -135331085 - MER31A LTR ERV1 -162 323 1 2683 159 64 12 chr10 4986014 4986580 -135330185 - LTR49 LTR ERV1 0 595 1 248 242 100 23 chr10 4986598 4986617 -135330148 + MER5B DNA MER1_type 59 75 -103 2283 76 0 3 chr10 4986617 4986908 -135329857 + AluY SINE Alu 1 290 -21 248 242 100 23 chr10 4986908 4987005 -135329760 + MER5B DNA MER1_type 75 174 -4 270 159 0 0 chr10 4987637 4987681 -135329084 + LTR32 LTR ERVL 15 58 -413 257 145 194 0 chr10 4987679 4987741 -135329024 + LTR32 LTR ERVL 15 88 -383 * 315 104 224 0 chr10 4987715 4987782 -135328983 + LTR32 LTR ERVL 6 87 -384 238 177 194 0 chr10 4987763 4987825 -135328940 + LTR32 LTR ERVL 15 88 -383 * 277 136 0 0 chr10 4987805 4987849 -135328916 + LTR32 LTR ERVL 15 58 -413 251 145 194 0 chr10 4987847 4987909 -135328856 + LTR32 LTR ERVL 15 88 -383 * 310 115 197 0 chr10 4987889 4987950 -135328815 + LTR32 LTR ERVL 15 87 -384 240 160 60 0 chr10 4987925 4987975 -135328790 + LTR32 LTR ERVL 6 58 -413 * 291 111 0 0 chr10 4987972 4988017 -135328748 + LTR32 LTR ERVL 14 58 -413 288 120 60 0 chr10 4988009 4988059 -135328706 + LTR32 LTR ERVL 6 58 -413 * 657 219 26 7 chr10 4988097 4988248 -135328517 + LTR32 LTR ERVL 232 385 -86 2426 162 41 9 chr10 4989196 4989635 -135327130 - MER6 DNA MER2_type -411 454 2 695 252 59 50 chr10 4990121 4990462 -135326303 + L1MC4 LINE L1 7498 7841 -201 20641 58 9 6 chr10 4990590 4994100 -135322665 - L1PA5 LINE L1 -5 6149 2628 334 183 97 11 chr10 4994100 4994193 -135322572 + MSTB2 LTR MaLR 357 457 0 1420 188 23 31 chr10 4994392 4994615 -135322150 - MLT1A1 LTR MaLR -5 360 140 2236 154 56 5 chr10 4994615 4995024 -135321741 + MSTB1 LTR MaLR 1 430 -2 1420 188 23 31 chr10 4995024 4995152 -135321613 - MLT1A1 LTR MaLR -225 140 12 365 315 124 35 chr10 4995434 4995748 -135321017 + L2 LINE L2 2971 3312 -1 1693 136 23 28 chr10 4996936 4997493 -135319272 - LTR10E LTR ERV1 -21 612 8 5137 2 0 0 chr10 4997498 4998090 -135318675 - L1HS LINE L1 0 6155 5564 14121 48 3 2 chr10 4998190 5000059 -135316706 - L1P LINE L1 -1811 4335 2466 1663 62 0 37 chr10 5000057 5000301 -135316464 - L1P LINE L1 -5359 787 553 * 298 319 37 12 chr10 5000992 5001155 -135315610 + MER92B LTR ERV1 242 408 -228 225 0 48 48 chr10 5001241 5001283 -135315482 + (CAAAA)n Simple_repeat Simple_repeat 5 46 0 365 233 43 0 chr10 5001447 5001563 -135315202 + (TCTA)n Simple_repeat Simple_repeat 3 123 0 21 57 0 0 chr10 5001633 5001668 -135315097 + AT_rich Low_complexity Low_complexity 1 35 0 268 210 87 43 chr10 5001765 5001903 -135314862 + Charlie2 DNA MER1_type 2719 2862 0 276 323 0 83 chr10 5002339 5002472 -135314293 - MIR3 SINE MIR -84 124 3 1030 255 75 23 chr10 5002882 5003321 -135313444 + L1ME2 LINE L1 5690 6151 -13 567 231 33 86 chr10 5003883 5004176 -135312589 + L1MC4 LINE L1 6693 7002 -1008 383 222 93 25 chr10 5004196 5004358 -135312407 + L1MC5 LINE L1 7321 7493 -468 321 247 0 0 chr10 5004374 5004471 -135312294 + GA-rich Low_complexity Low_complexity 1 97 0 453 232 116 74 chr10 5004480 5004525 -135312240 + L1MC5 LINE L1 7474 7516 -445 1985 108 58 0 chr10 5004525 5004802 -135311963 + AluSg SINE Alu 1 293 -17 453 232 116 74 chr10 5004802 5005135 -135311630 + L1MC5 LINE L1 7516 7868 -93 5981 150 35 15 chr10 5005153 5006268 -135310497 + HSMAR2 DNA Mariner 2 1138 -164 348 209 29 0 chr10 5006430 5006535 -135310230 + HSMAR2 DNA Mariner 1192 1299 -3 28 71 0 0 chr10 5006549 5006605 -135310160 + AT_rich Low_complexity Low_complexity 1 56 0 241 333 26 0 chr10 5006872 5006986 -135309779 + MLT1L LTR MaLR 173 289 -326 247 173 0 19 chr10 5007167 5007219 -135309546 + MLT1L LTR MaLR 555 605 -10 32 43 0 0 chr10 5007395 5007441 -135309324 + AT_rich Low_complexity Low_complexity 1 46 0 637 281 117 40 chr10 5007647 5008244 -135308521 + L2 LINE L2 1819 2461 -853 393 308 119 13 chr10 5009034 5009193 -135307572 - MIR3 SINE MIR -6 202 27 414 262 0 0 chr10 5009432 5009581 -135307184 + (TG)n Simple_repeat Simple_repeat 2 150 0 10914 92 9 5 chr10 5011074 5012659 -135304106 + HERVFH19I LTR ERV1 3658 5249 -337 1218 164 9 0 chr10 5012658 5012872 -135303893 + HERVFH19I LTR ERV1 7503 7718 -1 * 1194 79 0 0 chr10 5012875 5013040 -135303725 + LTR19B LTR ERV1 3 167 -413 4331 257 21 7 chr10 5013041 5014139 -135302626 - LTR25-int LTR ERV1 -6223 2696 1584 655 222 160 31 chr10 5014128 5014358 -135302407 - LTR25-int LTR ERV1 -1704 4559 2493 * 7063 43 12 0 chr10 5014364 5015617 -135301148 - L1PA4 LINE L1 -5 6150 4886 3365 198 50 28 chr10 5015720 5016534 -135300231 - LTR25-int LTR ERV1 -6162 834 3 2091 177 68 48 chr10 5016543 5017109 -135299656 - LTR25 LTR ERV1 -4 788 251 349 198 0 25 chr10 5017228 5017309 -135299456 - LTR25 LTR ERV1 -501 293 215 330 148 0 148 chr10 5017289 5017377 -135299388 - MER61E LTR ERV1 -458 111 37 * 201 270 81 27 chr10 5018343 5018417 -135298348 + MIR SINE MIR 110 187 -75 555 165 0 0 chr10 5018922 5019007 -135297758 - AluJb SINE Alu -29 283 199 1068 90 0 0 chr10 5019009 5019142 -135297623 + AluSg/x SINE Alu 164 296 -16 696 241 0 0 chr10 5019149 5019282 -135297483 + FLAM_A SINE Alu 1 133 0 1986 147 0 10 chr10 5021011 5021303 -135295462 + AluJo SINE Alu 1 289 -23 2415 55 0 7 chr10 5021317 5021645 -135295120 + AluY SINE Alu 1 311 0 2061 185 19 56 chr10 5022533 5023068 -135293697 - MLT2B1 LTR ERVL 0 520 6 2342 81 10 0 chr10 5023070 5023366 -135293399 + AluSq SINE Alu 1 299 -14 516 271 0 0 chr10 5023378 5023548 -135293217 + (TG)n Simple_repeat Simple_repeat 2 171 0 490 167 83 19 chr10 5024385 5024493 -135292272 - MLT1C LTR MaLR -3 464 350 662 186 87 6 chr10 5024519 5024680 -135292085 - MER104 DNA Tc2 -6 174 1 278 280 200 0 chr10 5025391 5025516 -135291249 - MLT1I LTR MaLR -11 398 249 333 211 0 0 chr10 5025575 5025651 -135291114 + L1 LINE L1 4290 4365 -1781 1313 109 104 0 chr10 5025656 5025877 -135290888 - L1M2 LINE L1 -495 5805 5562 1815 189 35 10 chr10 5026358 5026759 -135290006 + MSTB LTR MaLR 1 411 -15 2383 35 0 18 chr10 5026913 5027226 -135289539 + AluY SINE Alu 1 308 0 180 189 75 38 chr10 5027227 5027280 -135289485 + L2 LINE L2 3255 3309 -4 383 290 138 41 chr10 5028406 5028696 -135288069 - L2 LINE L2 -1 3312 2995 1336 210 14 31 chr10 5029001 5029129 -135287636 + MLT1A1 LTR MaLR 12 141 -224 2241 163 48 5 chr10 5029129 5029541 -135287224 - MSTB1 LTR MaLR -2 430 1 1336 210 14 31 chr10 5029541 5029765 -135287000 + MLT1A1 LTR MaLR 141 358 -7 1699 220 20 18 chr10 5029967 5030362 -135286403 - MSTD LTR MaLR 0 396 1 341 324 103 29 chr10 5031041 5031353 -135285412 + L3 LINE CR1 629 963 -614 1982 37 0 12 chr10 5031623 5031864 -135284901 + AluY SINE Alu 74 311 0 6224 93 27 0 chr10 5032158 5033141 -135283624 - L1PA12 LINE L1 0 6168 5174 198 268 18 0 chr10 5033689 5033745 -135283020 - MIR SINE MIR -52 210 154 22 0 0 0 chr10 5033758 5033780 -135282985 + AT_rich Low_complexity Low_complexity 1 22 0 1905 124 14 40 chr10 5034696 5035050 -135281715 - Tigger2 DNA MER2_type -101 2617 2273 430 171 0 0 chr10 5035039 5035109 -135281656 + MER8 DNA MER2_type 170 239 0 * 263 27 0 27 chr10 5035114 5035151 -135281614 + (TG)n Simple_repeat Simple_repeat 1 36 0 2912 21 0 3 chr10 5035405 5035781 -135280984 - L1P LINE L1 -788 5358 4984 * 9006 30 4 0 chr10 5035779 5036902 -135279863 + L1P LINE L1 3833 4959 -1187 574 294 48 22 chr10 5036904 5037173 -135279592 - HERVL-B3 LTR ERVL -5378 276 1 284 151 50 8 chr10 5037211 5037330 -135279435 + (TA)n Simple_repeat Simple_repeat 2 125 0 1100 268 20 49 chr10 5037387 5037953 -135278812 - MLT2B3 LTR ERVL -50 504 1 8865 187 46 30 chr10 5037993 5040052 -135276713 + Tigger1 DNA MER2_type 4 2095 -323 9541 48 12 0 chr10 5040155 5042057 -135274708 - L1PA6 LINE L1 -151 6003 4076 5160 98 108 33 chr10 5042057 5043145 -135273620 + MER11A LTR ERVK 1 1266 0 2910 55 57 2 chr10 5043145 5043564 -135273201 - L1PA6 LINE L1 -2065 4081 3640 411 141 0 0 chr10 5043563 5043627 -135273138 - L1P LINE L1 -6072 74 11 * 896 239 38 4 chr10 5043642 5043905 -135272860 + Tigger1 DNA MER2_type 2147 2418 0 354 282 37 29 chr10 5043919 5044164 -135272601 - L1M4 LINE L1 -3758 2388 2142 426 167 1 0 chr10 5044171 5044264 -135272501 + L1P5 LINE L1 5416 5509 -647 256 237 66 13 chr10 5044268 5044292 -135272473 - U8 snRNA snRNA -42 94 73 1586 195 4 0 chr10 5044292 5044549 -135272216 - AluSq SINE Alu -55 258 1 256 237 66 13 chr10 5044549 5044600 -135272165 - U8 snRNA snRNA -63 73 15 544 33 55 0 chr10 5045215 5045306 -135271459 + (TAGA)n Simple_repeat Simple_repeat 2 97 0 793 308 27 6 chr10 5047069 5047403 -135269362 + MER68 LTR ERV1 108 448 -114 1340 199 17 52 chr10 5047430 5047717 -135269048 + AluJb SINE Alu 9 285 -27 772 207 38 42 chr10 5048476 5048713 -135268052 - L1PB2 LINE L1 0 6151 5916 11413 209 50 16 chr10 5048854 5053277 -135263488 - L1PB2 LINE L1 -163 6045 1432 2147 114 9 19 chr10 5053277 5053592 -135263173 - AluSx SINE Alu 0 312 1 11413 209 50 16 chr10 5053592 5054144 -135262621 - L1PB2 LINE L1 -4776 1432 900 4599 199 41 33 chr10 5054278 5055858 -135260907 - L1PB2 LINE L1 -5219 985 2 352 241 35 41 chr10 5056367 5056512 -135260253 - L1MC4 LINE L1 -622 7420 7277 22 80 0 0 chr10 5056619 5056669 -135260096 + AT_rich Low_complexity Low_complexity 1 50 0 318 348 36 5 chr10 5056923 5057144 -135259621 - L1MC4 LINE L1 -980 7062 6835 421 198 69 10 chr10 5057600 5057701 -135259064 - MER5A DNA MER1_type -75 114 8 195 379 131 0 chr10 5058129 5058282 -135258483 + MIR3 SINE MIR 3 175 -33 287 284 90 19 chr10 5058437 5058592 -135258173 + MER92B LTR ERV1 374 539 -97 240 281 141 20 chr10 5058820 5059019 -135257746 - Charlie2 DNA MER1_type -2609 253 31 333 208 73 0 chr10 5059544 5059640 -135257125 - ORSL DNA AcHobo -172 103 1 3106 108 82 4 chr10 5060829 5061303 -135255462 - MER9 LTR ERVK 0 511 1 288 270 93 28 chr10 5061682 5061930 -135254835 - L1ME4a LINE L1 -50 6071 5808 255 317 84 42 chr10 5062024 5062166 -135254599 - L2 LINE L2 0 3313 3166 639 291 9 36 chr10 5062206 5062426 -135254339 + LTR40a LTR ERVL 1 214 -305 603 181 9 0 chr10 5062427 5062532 -135254233 - LTR49 LTR ERV1 0 595 490 2152 150 53 3 chr10 5062535 5062895 -135253870 + MER39B LTR ERV1 6 383 -270 1309 232 27 55 chr10 5062898 5063265 -135253500 + MSTB1-int LTR MaLR 1295 1651 0 2064 188 53 14 chr10 5063265 5063681 -135253084 + MSTB1 LTR MaLR 1 432 0 2128 131 25 0 chr10 5064081 5064401 -135252364 - MER75 DNA T2_type 0 514 187 2058 70 11 22 chr10 5064403 5064674 -135252091 + HERVL-A1 LTR ERVL 3645 3912 -1742 * 6984 93 43 6 chr10 5064667 5065651 -135251114 + HERVL-A1 LTR ERVL 4635 5654 0 3201 99 47 0 chr10 5065651 5066038 -135250727 + MLT2A1 LTR ERVL 1 411 -33 195 69 0 0 chr10 5066038 5066067 -135250698 + (TA)n Simple_repeat Simple_repeat 2 30 0 3201 99 47 0 chr10 5066067 5066103 -135250662 + MLT2A1 LTR ERVL 411 444 0 1820 196 15 15 chr10 5066103 5066495 -135250270 + Tigger1 DNA MER2_type 1560 1951 -467 297 276 11 11 chr10 5066498 5066585 -135250180 + Tigger3(Golem) DNA MER2_type 2942 3028 -1 631 264 66 46 chr10 5066587 5066624 -135250141 - L1M4c LINE L1 -4007 2377 2342 1479 170 120 0 chr10 5066624 5066900 -135249865 - AluSx SINE Alu -3 309 1 631 264 66 46 chr10 5066900 5067427 -135249338 - L1M4c LINE L1 -4042 2342 1713 570 325 96 17 chr10 5067799 5068091 -135248674 - L2 LINE L2 -890 2424 2110 3055 174 78 41 chr10 5069206 5069889 -135246876 + pTR5 LTR ERV1 741 1448 -990 8216 184 102 69 chr10 5070026 5071228 -135245537 - MER51B-int LTR ERV1 0 7816 6655 234 0 0 0 chr10 5071228 5071254 -135245511 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 8216 184 102 69 chr10 5071254 5072705 -135244060 - MER51B-int LTR ERV1 -1161 6655 4954 856 172 93 54 chr10 5072687 5072891 -135243874 - MER51B-int LTR ERV1 -3244 1973 1762 * 877 143 27 0 chr10 5072893 5073040 -135243725 + GSAT Satellite centromeric 40 190 -27 1498 129 19 23 chr10 5073043 5073307 -135243458 - MER51B-int LTR ERV1 -2852 3094 2832 * 2049 134 64 0 chr10 5073303 5073631 -135243134 - MER51B-int LTR ERV1 -4504 3312 2964 879 108 7 7 chr10 5073639 5073787 -135242978 - MER51B-int LTR ERV1 -5676 2140 1993 2059 151 3 0 chr10 5073787 5074086 -135242679 + AluSq SINE Alu 1 300 -13 1976 166 92 26 chr10 5074092 5074471 -135242294 - MER51B-int LTR ERV1 -7412 404 1 2693 130 19 0 chr10 5074471 5074841 -135241924 - MER51B LTR ERV1 0 377 1 1103 256 19 4 chr10 5074841 5075107 -135241658 + MLT1A1 LTR MaLR 96 365 0 679 335 0 0 chr10 5075304 5075501 -135241264 - MSTD LTR MaLR 0 396 200 2299 221 32 15 chr10 5075699 5076232 -135240533 + MER67A LTR ERV1 1 542 -1 1768 215 80 67 chr10 5076566 5077152 -135239613 + MER67C LTR ERV1 28 621 -89 1531 143 0 0 chr10 5077282 5077505 -135239260 - AluSg SINE Alu -87 223 1 332 180 60 20 chr10 5077506 5077606 -135239159 + MER67C LTR ERV1 607 710 0 425 224 26 26 chr10 5077989 5078105 -135238660 + MER31B LTR ERV1 245 360 -106 613 121 10 20 chr10 5078132 5078231 -135238534 + MER4A LTR ERV1 1 98 -566 1830 151 3 22 chr10 5078231 5078583 -135238182 + MER4A LTR ERV1 261 664 0 1398 184 23 0 chr10 5078583 5078842 -135237923 + LTR49 LTR ERV1 23 287 -308 912 194 155 52 chr10 5078843 5079153 -135237612 + MER4A LTR ERV1 1 342 -322 518 139 285 7 chr10 5079209 5079346 -135237419 + MER4C LTR ERV1 291 465 0 547 152 132 111 chr10 5079346 5079605 -135237160 + LTR49 LTR ERV1 285 594 -1 2280 105 3 0 chr10 5079836 5080130 -135236635 + AluSp SINE Alu 1 295 -18 874 186 34 0 chr10 5080451 5080628 -135236137 + MSTD LTR MaLR 1 183 -213 201 39 0 0 chr10 5080640 5080666 -135236099 + (TC)n Simple_repeat Simple_repeat 1 26 0 509 169 11 0 chr10 5080668 5080757 -135236008 + MSTD LTR MaLR 339 428 0 2983 133 11 77 chr10 5081954 5082385 -135234380 - MER75 DNA T2_type -1 513 124 1807 131 0 69 chr10 5082385 5082691 -135234074 + AluSx SINE Alu 1 285 -27 2983 133 11 77 chr10 5082691 5082808 -135233957 - MER75 DNA T2_type -390 124 1 802 202 71 158 chr10 5083540 5084185 -135232580 + LTR49 LTR ERV1 7 595 0 1834 166 0 11 chr10 5084779 5085091 -135231674 + AluSx SINE Alu 1 309 0 1033 292 58 18 chr10 5085228 5085622 -135231143 - LTR26 LTR ERV1 -3 600 191 3481 240 11 33 chr10 5086577 5087512 -135229253 - L1 LINE L1 -1847 4299 3386 5405 37 0 6 chr10 5087512 5088136 -135228629 - L1PA4 LINE L1 -1 6154 5535 4032 139 5 5 chr10 5088237 5088863 -135227902 + MER50-int LTR ERV1 5402 6027 -1178 1844 162 10 0 chr10 5088862 5089159 -135227606 + MER50-int LTR ERV1 6882 7181 -24 * 1076 160 52 16 chr10 5089160 5089354 -135227411 + MER50 LTR ERV1 1 201 -533 552 103 103 0 chr10 5089391 5089488 -135227277 - L1PA15 LINE L1 -6 6159 6053 2218 212 35 8 chr10 5089496 5089981 -135226784 - L1P LINE L1 -1239 4907 4410 336 270 0 0 chr10 5090013 5090161 -135226604 + (CA)n Simple_repeat Simple_repeat 1 148 0 298 157 20 0 chr10 5091130 5091181 -135225584 + LTR29 LTR ERV1 571 622 0 189 74 0 0 chr10 5091581 5091608 -135225157 + (TAA)n Simple_repeat Simple_repeat 1 27 0 682 258 19 24 chr10 5092918 5093152 -135223613 + MLT1E LTR MaLR 252 495 -98 1008 106 0 35 chr10 5093351 5093492 -135223273 + AluSq/x SINE Alu 2 137 -176 1081 281 81 17 chr10 5093965 5094432 -135222333 + LTR26 LTR ERV1 104 600 -3 744 199 89 171 chr10 5094935 5095583 -135221182 - LTR49 LTR ERV1 0 595 1 1168 228 35 27 chr10 5097348 5097607 -135219158 + AluJo SINE Alu 3 263 -49 1954 184 11 3 chr10 5097613 5097961 -135218804 - LTR49 LTR ERV1 -242 353 3 420 214 19 10 chr10 5097964 5098067 -135218698 - MER31B LTR ERV1 -106 360 257 2104 152 129 28 chr10 5098103 5098491 -135218274 + MSTA LTR MaLR 2 428 0 7328 246 43 18 chr10 5098493 5100031 -135216734 + MSTA-int LTR MaLR 3 1579 -1 2106 127 132 43 chr10 5100032 5100425 -135216340 + MSTA LTR MaLR 1 428 0 434 230 34 40 chr10 5100811 5100959 -135215806 - MER67C LTR ERV1 -3 707 561 3897 286 15 1 chr10 5100962 5101880 -135214885 + PABL_B-int LTR ERV1 3754 4684 -2438 343 153 17 0 chr10 5101885 5101944 -135214821 + MER4A LTR ERV1 605 664 0 2111 212 28 37 chr10 5101944 5102487 -135214278 + L1MB3 LINE L1 5646 6183 0 395 203 70 44 chr10 5102763 5102921 -135213844 - LTR49-int LTR ERV1 -5211 1120 959 779 326 25 0 chr10 5103098 5103340 -135213425 - L1PA15-16 LINE L1 -5339 1510 1263 324 317 10 0 chr10 5103696 5103797 -135212968 - L1M2 LINE L1 -5793 1056 955 1072 286 106 24 chr10 5103857 5104318 -135212447 - L2 LINE L2 -1227 2087 1589 668 223 0 0 chr10 5104320 5104459 -135212306 - MLT1D LTR MaLR -3 502 364 247 296 0 0 chr10 5104455 5104509 -135212256 + Tigger3(Golem) DNA MER2_type 2975 3028 -1 * 2512 270 51 26 chr10 5104512 5105935 -135210830 - L1M4c LINE L1 -4026 2358 806 542 237 0 23 chr10 5106466 5106597 -135210168 - U8 snRNA snRNA -4 132 5 387 277 84 47 chr10 5108965 5109247 -135207518 + MER68 LTR ERV1 238 599 -6 228 312 136 0 chr10 5111995 5112149 -135204616 - L2 LINE L2 -1357 1957 1783 2336 86 0 13 chr10 5113067 5113369 -135203396 + AluSp SINE Alu 1 298 -15 994 241 108 49 chr10 5113411 5113939 -135202826 - LTR49-int LTR ERV1 -2464 2472 1914 883 144 7 7 chr10 5114431 5114584 -135202181 - L1PA13 LINE L1 -7 6156 6004 711 302 60 0 chr10 5114585 5114850 -135201915 - L2 LINE L2 -1436 1878 1598 1500 253 26 17 chr10 5114857 5115323 -135201442 - MLT1D LTR MaLR 0 505 36 196 290 16 16 chr10 5116123 5116185 -135200580 - MER5B DNA MER1_type -68 110 49 666 203 120 0 chr10 5116194 5116352 -135200413 - L1PB4 LINE L1 0 6156 5980 386 165 13 25 chr10 5116350 5116429 -135200336 - L1PA15-16 LINE L1 -5570 1279 1202 * 524 258 19 80 chr10 5116443 5116804 -135199961 - L1 LINE L1 -826 5320 4982 3648 181 74 15 chr10 5117298 5118078 -135198687 - LTR1B LTR ERV1 0 826 1 223 208 0 38 chr10 5118982 5119035 -135197730 + CT-rich Low_complexity Low_complexity 2 52 0 2671 264 10 8 chr10 5119280 5120002 -135196763 + MST-int LTR MaLR 910 1632 -19 535 264 39 10 chr10 5120079 5120287 -135196478 - L1M4c LINE L1 -4143 2241 2028 2200 247 40 49 chr10 5120378 5120565 -135196200 - L1M4c LINE L1 -4564 1820 1633 2003 122 21 0 chr10 5120565 5120851 -135195914 + AluSc SINE Alu 1 292 -17 2200 247 40 49 chr10 5120851 5121016 -135195749 - L1M4c LINE L1 -4751 1633 1468 1675 147 30 4 chr10 5121016 5121281 -135195484 - AluSx SINE Alu -5 307 36 2200 247 40 49 chr10 5121281 5121943 -135194822 - L1M4c LINE L1 -4916 1468 813 2025 123 3 10 chr10 5121943 5122236 -135194529 - AluSc SINE Alu -18 291 1 2200 247 40 49 chr10 5122236 5122273 -135194492 - L1M4c LINE L1 -5571 813 777 225 265 68 34 chr10 5122353 5122470 -135194295 - L1M4c LINE L1 -5714 670 550 416 258 38 30 chr10 5122796 5122928 -135193837 - U8 snRNA snRNA -3 133 1 23 33 0 0 chr10 5123285 5123315 -135193450 + AT_rich Low_complexity Low_complexity 1 30 0 966 303 94 16 chr10 5125207 5125719 -135191046 + MER68 LTR ERV1 1 552 -10 204 290 153 17 chr10 5128464 5128640 -135188125 - L2 LINE L2 -1317 1997 1798 236 261 11 0 chr10 5130021 5130113 -135186652 + (CA)n Simple_repeat Simple_repeat 1 93 0 379 319 127 0 chr10 5130392 5130549 -135186216 + MIR3 SINE MIR 26 202 -6 601 263 110 32 chr10 5131335 5131773 -135184992 - L2 LINE L2 -853 2461 1990 321 264 58 50 chr10 5131783 5131904 -135184861 - L1MC5 LINE L1 -518 7443 7322 601 261 39 32 chr10 5131934 5132214 -135184551 - L1MC4 LINE L1 -999 7043 6762 846 268 68 11 chr10 5132834 5133215 -135183550 - L1ME2 LINE L1 -66 6098 5696 246 321 27 54 chr10 5133663 5133775 -135182990 + MIR SINE MIR 20 128 -80 251 232 71 19 chr10 5134201 5134356 -135182409 - Charlie2 DNA MER1_type -4 2858 2696 297 127 38 13 chr10 5134548 5134627 -135182138 + (TAGA)n Simple_repeat Simple_repeat 1 81 0 330 316 83 18 chr10 5134791 5135069 -135181696 - MER92B LTR ERV1 -91 545 250 414 240 91 39 chr10 5135746 5136000 -135180765 - ORSL DNA AcHobo 0 275 9 1951 117 163 14 chr10 5137306 5137675 -135179090 + MSTA LTR MaLR 1 424 -4 334 274 63 84 chr10 5137905 5138095 -135178670 - L2 LINE L2 0 3313 3128 420 320 31 16 chr10 5138095 5138289 -135178476 + LTR40a LTR ERVL 1 197 -322 453 204 19 0 chr10 5138308 5138408 -135178357 - LTR49 LTR ERV1 -2 593 492 838 120 84 0 chr10 5138408 5138550 -135178215 + MER39B LTR ERV1 1 154 -499 941 184 22 0 chr10 5138564 5138749 -135178016 - LTR49-int LTR ERV1 -327 6004 5816 288 239 114 0 chr10 5138761 5138849 -135177916 - LTR49-int LTR ERV1 -189 6142 6045 2339 151 73 14 chr10 5138859 5139296 -135177469 + HUERS-P1 LTR ERV1 5794 6256 -7 2344 114 0 0 chr10 5139296 5139595 -135177170 + AluSx SINE Alu 1 299 -13 3920 138 15 58 chr10 5139610 5140332 -135176433 + LTR8 LTR ERV1 1 691 0 6670 186 53 22 chr10 5140332 5142076 -135174689 + HUERS-P1 LTR ERV1 3959 5756 -575 207 136 0 45 chr10 5142192 5142236 -135174529 + (TTTC)n Simple_repeat Simple_repeat 1 42 0 641 208 26 53 chr10 5142316 5142788 -135173977 + MER4C LTR ERV1 4 465 0 239 247 21 32 chr10 5142850 5142943 -135173822 + CT-rich Low_complexity Low_complexity 5 96 0 2089 253 20 42 chr10 5143185 5143782 -135172983 + MSTB1-int LTR MaLR 976 1559 -92 1785 208 45 14 chr10 5143795 5144214 -135172551 + MSTB1 LTR MaLR 1 432 0 624 250 0 0 chr10 5144324 5144484 -135172281 + L1P LINE L1 5059 5218 -928 277 356 40 7 chr10 5144494 5144643 -135172122 - ERVL LTR ERVL -5375 279 126 * 339 301 68 0 chr10 5144634 5144780 -135171985 - ERVL LTR ERVL -5306 458 303 27344 26 1 0 chr10 5144792 5148980 -135167785 - L1PA3 LINE L1 0 6155 1967 1141 289 61 7 chr10 5149579 5150004 -135166761 + MER68 LTR ERV1 1 448 -114 1352 179 21 69 chr10 5150031 5150322 -135166443 + AluJb SINE Alu 9 285 -27 240 303 0 0 chr10 5150336 5150402 -135166363 + MER68 LTR ERV1 491 556 -6 3873 124 56 73 chr10 5150625 5151423 -135165342 + LTR1 LTR ERV1 1 785 0 1742 179 22 11 chr10 5151908 5152272 -135164493 - L1PB2 LINE L1 -2 6865 6498 5655 182 79 10 chr10 5152375 5154287 -135162478 - L1PB2 LINE L1 -414 6453 4404 405 0 0 0 chr10 5154287 5154332 -135162433 + (TG)n Simple_repeat Simple_repeat 2 46 0 802 194 16 0 chr10 5154635 5154698 -135162067 - L1PB2 LINE L1 -2399 4463 4402 360 0 0 0 chr10 5154698 5154738 -135162027 + (TG)n Simple_repeat Simple_repeat 2 41 0 802 194 16 0 chr10 5154738 5154860 -135161905 - L1PB2 LINE L1 -2460 4402 4275 1705 262 26 37 chr10 5154871 5155523 -135161242 - L1PB2 LINE L1 -6216 647 3 261 304 22 29 chr10 5157665 5157803 -135158962 - L2 LINE L2 -1388 1926 1790 353 171 0 26 chr10 5160409 5160485 -135156280 - L1MC5 LINE L1 -285 7676 7603 386 242 114 72 chr10 5160789 5161053 -135155712 - L1MC4 LINE L1 -558 7484 7210 23 0 0 0 chr10 5161151 5161174 -135155591 + AT_rich Low_complexity Low_complexity 1 23 0 1985 130 103 30 chr10 5161280 5161619 -135155146 - THE1B LTR MaLR 0 364 1 5639 96 20 50 chr10 5161621 5162362 -135154403 - THE1B-int LTR MaLR -2 1578 864 2357 86 0 20 chr10 5162362 5162665 -135154100 - AluSg SINE Alu -13 297 1 5639 96 20 50 chr10 5162665 5162769 -135153996 - THE1B-int LTR MaLR -716 864 758 344 230 80 102 chr10 5162991 5163352 -135153413 - L1MC4 LINE L1 0 8042 7690 21 36 0 0 chr10 5163536 5163564 -135153201 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr10 5163825 5163851 -135152914 + AT_rich Low_complexity Low_complexity 1 26 0 262 361 0 0 chr10 5163883 5164002 -135152763 - L1MC4 LINE L1 -1036 7006 6888 269 194 45 0 chr10 5164541 5164608 -135152157 - MER5A DNA MER1_type -113 76 7 278 176 0 0 chr10 5165160 5165211 -135151554 - AluSq SINE Alu -2 306 256 1306 133 15 5 chr10 5165212 5165407 -135151358 - AluSq SINE Alu -116 197 1 982 282 111 24 chr10 5165629 5166080 -135150685 - MLT1H LTR MaLR -17 532 43 204 177 38 25 chr10 5166142 5166221 -135150544 + (TA)n Simple_repeat Simple_repeat 2 81 0 241 264 109 29 chr10 5166849 5167023 -135149742 - L1M4 LINE L1 -1544 4602 4415 247 308 75 0 chr10 5167208 5167328 -135149437 - L1MC4 LINE L1 -985 7057 6929 2258 105 0 10 chr10 5168688 5168984 -135147781 + AluSx SINE Alu 1 293 -19 3795 123 53 10 chr10 5169396 5169998 -135146767 - THE1B-int LTR MaLR -938 642 15 2187 128 51 26 chr10 5170000 5170351 -135146414 - THE1B LTR MaLR -2 362 3 409 299 72 14 chr10 5170407 5170628 -135146137 - L1MC4 LINE L1 -977 7065 6832 358 234 84 0 chr10 5171057 5171164 -135145601 - MER5A DNA MER1_type -73 116 1 186 229 12 108 chr10 5171647 5171730 -135145035 + MIR3 SINE MIR 95 169 -39 284 263 103 39 chr10 5171907 5172063 -135144702 - MLT1H LTR MaLR -27 522 357 315 256 39 45 chr10 5172078 5172234 -135144531 - L1M4 LINE L1 -877 5269 5115 2127 225 20 4 chr10 5172789 5173247 -135143518 - MSTB-int LTR MaLR -1186 465 1 1794 227 65 8 chr10 5173249 5173650 -135143115 - MSTB LTR MaLR -2 424 1 1916 158 0 3 chr10 5174764 5175061 -135141704 + AluSx SINE Alu 1 296 -16 643 338 61 7 chr10 5177443 5177739 -135139026 + L2 LINE L2 2113 2424 -890 25 51 0 0 chr10 5177876 5177915 -135138850 + AT_rich Low_complexity Low_complexity 1 39 0 2339 91 0 0 chr10 5177990 5178288 -135138477 + AluY SINE Alu 1 298 -13 2020 145 0 20 chr10 5178409 5178712 -135138053 + AluSx SINE Alu 10 306 -6 765 242 36 12 chr10 5179028 5179276 -135137489 + L1M4c LINE L1 2125 2378 -4006 465 275 51 29 chr10 5179276 5179414 -135137351 - MER7A DNA MER2_type 0 336 196 2084 113 28 0 chr10 5179421 5179705 -135137060 + AluSx SINE Alu 1 292 -20 861 81 0 65 chr10 5179727 5179851 -135136914 - AluSc SINE Alu -140 169 54 44945 40 1 4 chr10 5179966 5186138 -135130627 + L1PA3 LINE L1 2 6153 -2 956 225 16 0 chr10 5186166 5186357 -135130408 - MER7A DNA MER2_type -143 203 12 521 253 70 19 chr10 5186760 5186918 -135129847 - Tigger1 DNA MER2_type -1 2417 2252 8968 174 48 23 chr10 5187051 5188310 -135128455 - Tigger1 DNA MER2_type -573 1845 525 2262 92 7 0 chr10 5188310 5188592 -135128173 + AluSg SINE Alu 2 285 -25 8968 174 48 23 chr10 5188592 5189130 -135127635 - Tigger1 DNA MER2_type -1893 525 2 2064 233 27 33 chr10 5189168 5189679 -135127086 + MLT2B3 LTR ERVL 1 508 -46 231 125 0 0 chr10 5189679 5189719 -135127046 + (CA)n Simple_repeat Simple_repeat 1 40 0 1080 209 50 56 chr10 5189754 5190112 -135126653 + HERVL-B3 LTR ERVL 1 356 -5298 256 200 0 0 chr10 5190150 5190200 -135126565 + HERVL-B3 LTR ERVL 394 443 -5042 423 218 29 35 chr10 5190214 5190384 -135126381 + L1ME1 LINE L1 5106 5274 -872 29379 116 32 63 chr10 5191554 5195020 -135121745 + L1PA7 LINE L1 12 3167 -2987 210 37 0 0 chr10 5195020 5195047 -135121718 + (CA)n Simple_repeat Simple_repeat 2 28 0 29379 116 32 63 chr10 5195047 5197928 -135118837 + L1PA7 LINE L1 3167 6138 -16 7757 121 50 1 chr10 5197928 5199090 -135117675 + HSMAR1 DNA Mariner 13 1231 -56 217 351 40 35 chr10 5199154 5199356 -135117409 - L2 LINE L2 -140 3173 2971 665 238 37 56 chr10 5199633 5199847 -135116918 + L1MDa LINE L1 87 296 -6244 1747 257 43 19 chr10 5199887 5200417 -135116348 + L1ME1 LINE L1 5525 6067 -99 2583 216 35 24 chr10 5200417 5201042 -135115723 - LTR48B LTR ERV1 0 644 13 372 245 21 21 chr10 5201078 5201172 -135115593 + L1ME1 LINE L1 6068 6161 -5 1935 195 46 2 chr10 5201859 5202253 -135114512 + MSTB LTR MaLR 1 411 -15 13210 51 76 4 chr10 5202402 5204121 -135112644 + L1P LINE L1 2 1844 -4302 1443 204 25 0 chr10 5204619 5204893 -135111872 + AluJb SINE Alu 1 281 -31 366 250 23 0 chr10 5205606 5205694 -135111071 + L1MC4 LINE L1 6614 6703 -1339 222 118 0 0 chr10 5205697 5205731 -135111034 + (TA)n Simple_repeat Simple_repeat 1 34 0 1786 146 3 14 chr10 5205731 5206018 -135110747 - AluSx SINE Alu -19 293 10 373 287 9 0 chr10 5206631 5206739 -135110026 + (CA)n Simple_repeat Simple_repeat 1 109 0 363 304 20 54 chr10 5208024 5208172 -135108593 - MIR3 SINE MIR -31 177 35 1915 127 7 19 chr10 5208618 5208926 -135107839 - THE1B LTR MaLR 0 364 61 214 324 0 14 chr10 5408955 5409026 -134907739 - L2 LINE L2 -679 2635 2566 1187 128 3 78 chr10 5409126 5409432 -134907333 - AluSx SINE Alu -19 293 11 380 250 59 52 chr10 5411718 5411854 -134904911 - MER63 DNA MER1_type -73 763 1 208 278 19 0 chr10 5411886 5411940 -134904825 - L2 LINE L2 -244 3069 3015 242 274 21 21 chr10 5412164 5412259 -134904506 + CT-rich Low_complexity Low_complexity 5 99 0 24 0 0 0 chr10 5412434 5412458 -134904307 + GC_rich Low_complexity Low_complexity 1 24 0 969 163 102 0 chr10 5413017 5413213 -134903552 + AluJo SINE Alu 87 302 -10 388 17 0 52 chr10 5414112 5414170 -134902595 - L1PA3 LINE L1 0 6155 6101 212 186 17 0 chr10 5415038 5415097 -134901668 + CT-rich Low_complexity Low_complexity 2 61 0 27 0 0 0 chr10 5415251 5415278 -134901487 + AT_rich Low_complexity Low_complexity 1 27 0 573 282 60 13 chr10 5415331 5415480 -134901285 - MIR SINE MIR -50 212 57 241 241 56 0 chr10 5415510 5415564 -134901201 - MIR SINE MIR -188 74 18 589 192 75 0 chr10 5416863 5416983 -134899782 + FLAM_A SINE Alu 8 136 -6 242 297 0 0 chr10 5417178 5417242 -134899523 - L2 LINE L2 -21 3292 3229 185 275 94 56 chr10 5417323 5417483 -134899282 + MIR SINE MIR 97 262 0 198 0 0 0 chr10 5417653 5417675 -134899090 + (T)n Simple_repeat Simple_repeat 1 22 0 31 0 0 0 chr10 5420540 5420571 -134896194 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr10 5420969 5420990 -134895775 + (ATTG)n Simple_repeat Simple_repeat 3 23 0 1933 118 3 10 chr10 5422022 5422327 -134894438 - AluSc SINE Alu -1 308 6 1298 290 94 51 chr10 5422671 5424224 -134892541 - L1MEd LINE L1 -4641 1669 3 2680 226 79 50 chr10 5424414 5425134 -134891631 + L1M4b LINE L1 28 768 -6091 468 0 0 0 chr10 5426967 5427019 -134889746 + (CA)n Simple_repeat Simple_repeat 2 53 0 552 200 18 0 chr10 5427689 5427859 -134888906 + (TCCA)n Simple_repeat Simple_repeat 3 175 0 676 173 37 10 chr10 5427904 5428294 -134888471 + (TCCA)n Simple_repeat Simple_repeat 1 400 0 315 185 65 19 chr10 5428299 5428407 -134888358 + (CCCA)n Simple_repeat Simple_repeat 1 113 0 259 274 14 0 chr10 5428878 5428951 -134887814 + (CCCA)n Simple_repeat Simple_repeat 1 74 0 2031 121 7 0 chr10 5429933 5430230 -134886535 - AluSx SINE Alu -13 299 1 572 252 28 110 chr10 5433825 5434043 -134882722 - MIR SINE MIR -17 245 46 243 0 0 0 chr10 5434347 5434374 -134882391 + (A)n Simple_repeat Simple_repeat 1 27 0 2973 199 48 76 chr10 5434663 5435585 -134881180 + L1M4b LINE L1 743 1638 -5221 1756 238 70 9 chr10 5435947 5436507 -134880258 + L1M4b LINE L1 1616 2209 -4750 385 125 87 96 chr10 5436918 5437022 -134879743 - AluJ/FLAM SINE Alu -243 59 2 311 184 31 20 chr10 5439580 5439678 -134877087 + (TCCA)n Simple_repeat Simple_repeat 3 101 0 281 294 0 43 chr10 5439678 5439770 -134876995 - L2 LINE L2 0 3272 3185 811 177 0 0 chr10 5440067 5440197 -134876568 + FLAM_A SINE Alu 1 130 -3 561 306 44 20 chr10 5440304 5440547 -134876218 + MIR SINE MIR 3 248 -14 205 293 65 41 chr10 5440619 5440742 -134876023 - MIR SINE MIR -33 229 104 243 151 19 38 chr10 5440957 5441010 -134875755 + GA-rich Low_complexity Low_complexity 4 55 0 1518 147 66 7 chr10 5441385 5441657 -134875108 - AluJb SINE Alu -24 288 1 233 280 20 0 chr10 5442255 5442305 -134874460 + MER58A DNA MER1_type 1 51 -173 404 168 0 10 chr10 5442312 5442380 -134874385 - FLAM_A SINE Alu -11 122 66 343 140 0 18 chr10 5442537 5442594 -134874171 - FLAM_A SINE Alu -71 61 6 758 233 61 17 chr10 5442595 5442775 -134873990 + MER58A DNA MER1_type 37 224 0 281 167 0 0 chr10 5442784 5442832 -134873933 + L2 LINE L2 3263 3310 -3 237 162 0 0 chr10 5442885 5442922 -134873843 - MLT1A1 LTR MaLR 0 365 329 969 150 6 50 chr10 5442922 5443102 -134873663 + FAM SINE Alu 1 172 -13 1455 205 33 45 chr10 5443102 5443439 -134873326 - MLT1A1 LTR MaLR -32 333 1 376 292 116 13 chr10 5443655 5443826 -134872939 - MIR SINE MIR -43 165 2 194 291 50 92 chr10 5444123 5444264 -134872501 - MIR3 SINE MIR -71 137 3 2185 117 0 9 chr10 5444291 5444607 -134872158 - AluSq SINE Alu 0 313 1 411 213 11 21 chr10 5444818 5444912 -134871853 - MER5B DNA MER1_type -85 93 1 230 211 0 58 chr10 5444912 5444947 -134871818 - MIR3 SINE MIR -51 157 126 409 285 18 34 chr10 5446231 5446414 -134870351 - MIR SINE MIR -79 129 8 22 0 0 0 chr10 5447159 5447181 -134869584 + AT_rich Low_complexity Low_complexity 1 22 0 727 286 64 58 chr10 5448595 5449086 -134867679 + L1MC5 LINE L1 6414 6884 -924 189 94 0 0 chr10 5449175 5449207 -134867558 + (TTCC)n Simple_repeat Simple_repeat 4 35 0 1589 173 22 0 chr10 5449208 5449485 -134867280 - AluJo SINE Alu -21 291 9 8435 236 32 18 chr10 5449494 5449778 -134866987 - L1MCa LINE L1 -1509 4917 4638 1746 104 8 4 chr10 5449778 5450027 -134866738 - AluSg SINE Alu -14 296 47 8435 236 32 18 chr10 5450027 5452100 -134864665 - L1MCa LINE L1 -1788 4638 2517 3219 144 19 0 chr10 5452100 5452615 -134864150 + L1PA16 LINE L1 5642 6166 0 8435 236 32 18 chr10 5452615 5452859 -134863906 - L1MCa LINE L1 -3909 2517 2278 2347 163 29 51 chr10 5452863 5453118 -134863647 - L1MCa LINE L1 -4234 2192 1933 2075 110 7 3 chr10 5453118 5453409 -134863356 + AluSq SINE Alu 1 292 -21 2347 163 29 51 chr10 5453409 5453428 -134863337 - L1MCa LINE L1 -4493 1933 1915 2067 117 0 13 chr10 5453428 5453727 -134863038 + AluSq SINE Alu 1 295 -18 2347 163 29 51 chr10 5453727 5453942 -134862823 - L1MCa LINE L1 -4511 1915 1713 488 172 20 0 chr10 5453936 5454035 -134862730 - L1MCa LINE L1 -5381 1045 945 * 1722 115 33 62 chr10 5454036 5454340 -134862425 - AluSq SINE Alu -13 300 6 1300 142 0 13 chr10 5454487 5454719 -134862046 + AluSq SINE Alu 85 313 0 4022 143 9 6 chr10 5455731 5456382 -134860383 + MER39B LTR ERV1 1 653 0 2139 77 46 82 chr10 5456675 5456903 -134859862 + L1MA2 LINE L1 5927 6137 -167 2002 131 3 0 chr10 5456903 5457194 -134859571 + AluSx SINE Alu 1 292 -20 2139 77 46 82 chr10 5457194 5457357 -134859408 + L1MA2 LINE L1 6137 6304 0 2217 128 32 11 chr10 5457449 5457825 -134858940 - MLT1B LTR MaLR -4 386 3 1797 134 44 103 chr10 5457868 5458076 -134858689 - THE1B LTR MaLR 0 364 188 2187 119 0 0 chr10 5458076 5458388 -134858377 + AluSq SINE Alu 1 312 -1 1797 134 44 103 chr10 5458388 5458566 -134858199 - THE1B LTR MaLR -176 188 1 222 322 76 66 chr10 5458666 5458955 -134857810 - L2 LINE L2 -561 2753 2462 296 354 39 8 chr10 5459191 5459318 -134857447 + MIR SINE MIR 99 229 -33 227 243 13 13 chr10 5461370 5461462 -134855303 - MIR SINE MIR -61 147 93 1595 199 112 23 chr10 5461987 5462063 -134854702 + MLT1D LTR MaLR 29 97 -408 2253 114 75 41 chr10 5462063 5462475 -134854290 + MSTC LTR MaLR 1 426 -2 1595 199 112 23 chr10 5462475 5462834 -134853931 + MLT1D LTR MaLR 97 503 -2 378 210 25 0 chr10 5462967 5463048 -134853717 - MIR SINE MIR -151 111 29 180 376 30 20 chr10 5463168 5463269 -134853496 + MIR SINE MIR 59 160 -102 445 311 202 8 chr10 5463540 5463897 -134852868 + L3 LINE CR1 1122 1547 -30 312 282 36 0 chr10 5464442 5464552 -134852213 + MER5A DNA MER1_type 74 187 -2 419 177 0 0 chr10 5465854 5465933 -134850832 + LTR41 LTR ERVL 57 135 -638 2384 113 0 3 chr10 5466444 5466753 -134850012 + AluSx SINE Alu 1 308 -4 1964 152 11 55 chr10 5467660 5467828 -134848937 + MLT1A1 LTR MaLR 1 175 -190 2427 97 0 3 chr10 5467828 5468138 -134848627 + AluSx SINE Alu 1 309 -3 1964 152 11 55 chr10 5468138 5468351 -134848414 + MLT1A1 LTR MaLR 175 365 0 337 265 32 91 chr10 5468361 5468580 -134848185 - MLT1L LTR MaLR -194 391 112 2194 105 9 6 chr10 5468712 5469043 -134847722 + THE1B LTR MaLR 1 427 -30 691 175 0 113 chr10 5469053 5469213 -134847552 + Tigger1 DNA MER2_type 1 142 -2276 1085 184 14 0 chr10 5469234 5469441 -134847324 + Tigger1 DNA MER2_type 2209 2418 0 423 0 0 0 chr10 5471159 5471206 -134845559 + (TG)n Simple_repeat Simple_repeat 2 48 0 227 244 167 58 chr10 5471385 5471541 -134845224 + MER115 DNA AcHobo 140 312 -381 187 335 238 19 chr10 5472011 5473049 -134843716 - L2 LINE L2 -442 2872 1608 299 327 121 18 chr10 5473270 5473435 -134843330 - MIR3 SINE MIR -23 185 4 222 355 59 67 chr10 5474242 5474633 -134842132 - L2 LINE L2 -32 3240 2853 2413 85 0 19 chr10 5474636 5474953 -134841812 - AluY SINE Alu 0 311 1 929 209 29 9 chr10 5478122 5478332 -134838433 + MER41B LTR ERV1 422 635 0 238 291 90 0 chr10 5478405 5478527 -134838238 - MIR SINE MIR -66 142 19 2535 113 53 5 chr10 5478686 5479101 -134837664 + LTR49 LTR ERV1 1 435 -160 775 168 81 23 chr10 5479492 5479665 -134837100 + LTR49 LTR ERV1 413 595 0 183 268 71 0 chr10 5479816 5479872 -134836893 - L2 LINE L2 -5 3308 3249 2243 116 0 3 chr10 5480000 5480301 -134836464 + AluSx SINE Alu 1 300 -12 1401 132 182 23 chr10 5480363 5480621 -134836144 + AluJb SINE Alu 2 300 -2 2360 121 0 0 chr10 5481268 5481581 -134835184 - AluSq SINE Alu 0 313 1 1662 178 3 39 chr10 5481583 5481892 -134834873 - AluJb SINE Alu -9 303 6 2265 131 0 0 chr10 5482062 5482374 -134834391 - AluSx SINE Alu 0 312 1 636 293 120 10 chr10 5482429 5482613 -134834152 + L2 LINE L2 2044 2206 -1108 1745 189 7 0 chr10 5482613 5482909 -134833856 - AluJo SINE Alu -14 298 1 636 293 120 10 chr10 5482909 5483024 -134833741 + L2 LINE L2 2206 2376 -938 1019 128 7 0 chr10 5483037 5483178 -134833587 + AluSq/x SINE Alu 1 142 -170 1614 135 8 4 chr10 5483312 5483557 -134833208 + AluSg/x SINE Alu 66 311 -1 2059 152 3 18 chr10 5483726 5484068 -134832697 - MER1B DNA MER1_type 0 337 1 21 0 0 0 chr10 5484344 5484365 -134832400 + AT_rich Low_complexity Low_complexity 1 21 0 685 328 109 40 chr10 5484662 5485058 -134831707 + L3 LINE CR1 73 495 -1082 300 247 43 54 chr10 5485131 5485224 -134831541 - L2 LINE L2 -2 3311 3220 334 267 81 34 chr10 5485251 5485454 -134831311 + MIR SINE MIR 18 236 -26 798 325 153 13 chr10 5485565 5486088 -134830677 + L3 LINE CR1 768 1363 -214 188 61 61 0 chr10 5489563 5489596 -134827169 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 216 97 0 0 chr10 5490416 5490447 -134826318 + (GA)n Simple_repeat Simple_repeat 2 32 0 24 32 0 0 chr10 5490882 5490913 -134825852 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr10 5491278 5491299 -134825466 + AT_rich Low_complexity Low_complexity 1 21 0 203 243 225 45 chr10 5493220 5493331 -134823434 + MIR3 SINE MIR 68 198 -10 229 155 31 103 chr10 5494796 5494893 -134821872 + L2 LINE L2 1636 1725 -1589 1968 145 0 38 chr10 5494906 5495223 -134821542 - AluSx SINE Alu -7 305 1 189 301 108 60 chr10 5496052 5496218 -134820547 + L2 LINE L2 2968 3141 -131 475 261 34 8 chr10 5497577 5497696 -134819069 + L2 LINE L2 3191 3312 -1 2073 125 3 0 chr10 5497988 5498285 -134818480 - AluSg SINE Alu -12 298 1 745 149 51 93 chr10 5499866 5499941 -134816824 + ORSL DNA AcHobo 42 119 -156 1764 132 106 0 chr10 5499941 5500206 -134816559 - AluSx SINE Alu -19 293 1 745 149 51 93 chr10 5500206 5500344 -134816421 + ORSL DNA AcHobo 119 246 -29 709 249 24 6 chr10 5500378 5500543 -134816222 + MER5B DNA MER1_type 8 175 -3 2134 143 13 28 chr10 5500838 5500885 -134815880 - L1MB3 LINE L1 -28 6155 6109 2369 125 37 6 chr10 5500885 5501238 -134815527 + THE1B LTR MaLR 1 364 0 2134 143 13 28 chr10 5501238 5501583 -134815182 - L1MB3 LINE L1 -74 6109 5769 291 268 42 0 chr10 5501589 5501660 -134815105 + L2 LINE L2 3216 3289 -24 1803 195 0 0 chr10 5502184 5502481 -134814284 - AluJo SINE Alu -8 304 8 892 201 6 11 chr10 5502538 5502717 -134814048 - AluJo SINE Alu -91 221 44 201 209 47 0 chr10 5503576 5503619 -134813146 + (CATG)n Simple_repeat Simple_repeat 3 47 0 24 0 0 0 chr10 5503700 5503724 -134813041 + AT_rich Low_complexity Low_complexity 1 24 0 3422 176 39 41 chr10 5504391 5505010 -134811755 + L1 LINE L1 4513 5130 -1038 2171 133 0 0 chr10 5505010 5505325 -134811440 + AluSx SINE Alu 1 315 0 3422 176 39 41 chr10 5505325 5505622 -134811143 + L1 LINE L1 5130 5426 -742 300 235 0 29 chr10 5505624 5505692 -134811073 - L1ME LINE L1 -287 5834 5769 633 221 61 22 chr10 5505702 5505883 -134810882 + LTR41 LTR ERVL 1 188 -585 252 265 8 51 chr10 5506294 5506411 -134810354 + LTR41 LTR ERVL 656 767 -6 1176 100 0 0 chr10 5506610 5506760 -134810005 - AluSg/x SINE Alu -9 301 152 303 327 73 27 chr10 5506770 5506920 -134809845 - MIR SINE MIR -63 199 43 560 256 122 99 chr10 5507438 5507643 -134809122 + MLT1J LTR MaLR 6 205 -306 2475 86 3 0 chr10 5507643 5507944 -134808821 - AluSg SINE Alu -8 302 1 560 256 122 99 chr10 5507944 5508231 -134808534 + MLT1J LTR MaLR 205 509 -2 430 278 28 45 chr10 5508275 5508451 -134808314 + MIR SINE MIR 35 207 -55 366 234 170 18 chr10 5508884 5509055 -134807710 + MIR SINE MIR 44 240 -22 3339 171 20 12 chr10 5509060 5509376 -134807389 + L1MCa LINE L1 202 514 -5912 1662 151 80 37 chr10 5509376 5509423 -134807342 + MER47A DNA MER2_type 1 45 -2278 2309 112 0 13 chr10 5509423 5509737 -134807028 - AluSx SINE Alu -2 310 1 1662 151 80 37 chr10 5509737 5510040 -134806725 + MER47A DNA MER2_type 45 366 0 3339 171 20 12 chr10 5510040 5510372 -134806393 + L1MCa LINE L1 514 855 -5571 474 268 140 0 chr10 5510554 5510718 -134806047 + MIR SINE MIR 2 188 -74 305 349 0 0 chr10 5510820 5510929 -134805836 - MIR SINE MIR -69 139 31 2355 106 0 6 chr10 5511026 5511338 -134805427 - AluSg SINE Alu 0 310 1 1056 23 78 0 chr10 5511857 5511985 -134804780 - MER85 DNA T2_type -1 138 1 248 265 15 0 chr10 5512152 5512220 -134804545 + MIR SINE MIR 76 144 -64 233 306 54 18 chr10 5512492 5512603 -134804162 - L2 LINE L2 -509 2805 2691 393 244 0 0 chr10 5513459 5513537 -134803228 + MER21B LTR ERV1 13 90 -773 1803 216 91 93 chr10 5513559 5513796 -134802969 + MER21B LTR ERV1 19 255 -608 1464 200 11 0 chr10 5513796 5514061 -134802704 + AluJb SINE Alu 16 283 -29 1803 216 91 93 chr10 5514061 5514600 -134802165 + MER21B LTR ERV1 255 794 -69 250 337 125 16 chr10 5514767 5514951 -134801814 + L3 LINE CR1 1303 1506 -71 346 300 36 36 chr10 5515010 5515150 -134801615 + MIR3 SINE MIR 42 181 -27 1837 183 7 13 chr10 5515150 5515450 -134801315 - AluJb SINE Alu -14 298 1 1193 192 9 18 chr10 5516802 5517021 -134799744 - AluJo SINE Alu -95 217 1 1518 204 47 6 chr10 5517049 5517388 -134799377 - MLT1A1 LTR MaLR 0 365 13 2211 130 33 25 chr10 5518136 5518497 -134798268 - THE1B LTR MaLR 0 364 1 216 235 0 0 chr10 5520855 5520923 -134795842 + CT-rich Low_complexity Low_complexity 1 68 0 352 336 22 0 chr10 5521743 5521877 -134794888 - MIR3 SINE MIR -52 156 20 346 179 64 0 chr10 5522148 5522226 -134794539 - Charlie5 DNA MER1_type -2503 109 27 183 100 0 0 chr10 5523313 5523343 -134793422 + (A)n Simple_repeat Simple_repeat 1 30 0 2018 104 4 0 chr10 5524691 5524960 -134791805 - AluSc SINE Alu -39 270 1 22 0 0 0 chr10 5526983 5527005 -134789760 + AT_rich Low_complexity Low_complexity 1 22 0 527 184 0 10 chr10 5528268 5528366 -134788399 + FLAM_A SINE Alu 35 131 -11 243 0 0 0 chr10 5528917 5528944 -134787821 + (T)n Simple_repeat Simple_repeat 1 27 0 1262 169 21 104 chr10 5531991 5532246 -134784519 + MER66A-int LTR ERV1 3224 3499 -3177 2486 113 19 19 chr10 5532246 5532610 -134784155 + THE1B LTR MaLR 1 364 0 1262 169 21 104 chr10 5532610 5532977 -134783788 + MER66A-int LTR ERV1 3499 4437 -2239 462 194 78 10 chr10 5532977 5533080 -134783685 + MER4D LTR ERV1 52 161 -711 957 180 71 38 chr10 5533168 5533379 -134783386 + MER66A-int LTR ERV1 4611 4828 -1848 1916 158 11 29 chr10 5533473 5533538 -134783227 + MER66A-int LTR ERV1 6334 6399 -277 2358 95 7 0 chr10 5533538 5533834 -134782931 - AluSp SINE Alu -12 301 4 1916 158 11 29 chr10 5533834 5534117 -134782648 + MER66A-int LTR ERV1 6399 6676 0 1131 201 139 37 chr10 5534155 5534544 -134782221 + MER66A LTR ERV1 97 428 -50 452 173 109 18 chr10 5534861 5534971 -134781794 + MER53 DNA DNA 1 120 -69 328 206 244 23 chr10 5534877 5535008 -134781757 - MER53 DNA DNA -7 182 23 * 312 255 60 87 chr10 5536148 5536332 -134780433 + MIR SINE MIR 68 246 -16 186 231 0 92 chr10 5537070 5537135 -134779630 - L3 LINE CR1 -710 867 809 528 204 148 28 chr10 5538636 5538778 -134777987 - MIR SINE MIR -91 171 13 205 302 94 19 chr10 5540068 5540174 -134776591 + L2 LINE L2 3200 3313 0 449 248 50 8 chr10 5540854 5540975 -134775790 - L2 LINE L2 -11 3261 3136 576 266 130 11 chr10 5541905 5542089 -134774676 - MIR SINE MIR -53 209 4 6400 24 0 0 chr10 5546075 5547052 -134769713 - L1PA3 LINE L1 -141 6014 5038 2079 154 59 77 chr10 5547227 5547501 -134769264 - MER31A LTR ERV1 0 485 222 3421 121 31 13 chr10 5547501 5548054 -134768711 - L1MA2 LINE L1 -1 6303 5741 2079 154 59 77 chr10 5548054 5548273 -134768492 - MER31A LTR ERV1 -263 222 1 331 325 36 24 chr10 5549488 5549654 -134767111 + (CATG)n Simple_repeat Simple_repeat 1 168 0 * 379 385 0 6 chr10 5549546 5549725 -134767040 + (CA)n Simple_repeat Simple_repeat 1 178 0 416 363 18 6 chr10 5550390 5550558 -134766207 - MIR SINE MIR -69 193 24 532 227 81 86 chr10 5550695 5551399 -134765366 + L1MC5 LINE L1 6780 7670 -291 2256 118 0 0 chr10 5551399 5551695 -134765070 - AluSx SINE Alu -15 297 2 532 227 81 86 chr10 5551695 5551926 -134764839 + L1MC5 LINE L1 7670 7901 -60 316 224 17 60 chr10 5552219 5552335 -134764430 + L2 LINE L2 2985 3095 -177 256 241 218 30 chr10 5553972 5554105 -134762660 - MIR3 SINE MIR -41 167 10 214 167 0 0 chr10 5555561 5555597 -134761168 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 1990 126 7 10 chr10 5555800 5556124 -134760641 - AluSx SINE Alu 0 332 10 5155 102 10 0 chr10 5556124 5556836 -134759929 - LTR30 LTR ERV1 -2 720 2 204 67 0 0 chr10 5558910 5558940 -134757825 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 23 33 0 0 chr10 5564823 5564853 -134751912 + AT_rich Low_complexity Low_complexity 1 30 0 351 0 0 0 chr10 5565311 5565350 -134751415 + (TTA)n Simple_repeat Simple_repeat 2 40 0 859 202 12 6 chr10 5567062 5567235 -134749530 - FAM SINE Alu -1 174 1 388 308 61 35 chr10 5573993 5574191 -134742574 - MIR3 SINE MIR -3 205 3 674 301 74 7 chr10 5574946 5575351 -134741414 - L1M4 LINE L1 -2371 3775 3344 21 36 0 0 chr10 5577839 5577867 -134738898 + AT_rich Low_complexity Low_complexity 1 28 0 412 60 15 60 chr10 5578593 5578660 -134738105 - Alu SINE Alu -17 295 232 251 218 218 11 chr10 5578765 5578852 -134737913 + L2 LINE L2 2940 3044 -269 295 263 116 11 chr10 5581296 5581391 -134735374 + MIR SINE MIR 158 262 0 4109 148 21 83 chr10 5582926 5583253 -134733512 - LTR39 LTR ERV1 -29 754 408 2092 109 0 6 chr10 5583253 5583564 -134733201 + AluSx SINE Alu 1 309 -3 4109 148 21 83 chr10 5583564 5583956 -134732809 - LTR39 LTR ERV1 -375 408 88 2016 116 7 3 chr10 5583956 5584250 -134732515 - AluSx SINE Alu -17 295 1 4109 148 21 83 chr10 5584250 5584333 -134732432 - LTR39 LTR ERV1 -695 88 1 1982 121 0 7 chr10 5585208 5585497 -134731268 + AluSx SINE Alu 1 287 -25 253 205 110 16 chr10 5586450 5586562 -134730203 - L1ME4a LINE L1 -84 6025 1141 1957 159 43 0 chr10 5586600 5586926 -134729839 + MER47A DNA MER2_type 27 366 0 295 289 112 48 chr10 5586930 5587080 -134729685 - L1ME4a LINE L1 -223 5898 5732 1914 119 3 17 chr10 5587080 5587374 -134729391 - AluSx SINE Alu -22 290 1 295 289 112 48 chr10 5587374 5587410 -134729355 - L1ME4a LINE L1 -389 5732 5700 216 111 0 0 chr10 5587489 5587525 -134729240 + (TTCC)n Simple_repeat Simple_repeat 2 37 0 272 243 119 89 chr10 5587550 5587752 -134729013 - MLT1J LTR MaLR -103 408 201 2104 179 6 6 chr10 5588906 5589269 -134727496 - MLT1A1 LTR MaLR 0 365 3 1842 193 63 30 chr10 5589661 5590087 -134726678 - L1MD1 LINE L1 0 6242 5803 233 298 134 72 chr10 5590087 5590349 -134726416 + L2 LINE L2 2688 2965 -349 504 287 126 18 chr10 5590353 5590576 -134726189 - MIR SINE MIR 0 262 16 1524 163 62 24 chr10 5590908 5591196 -134725569 - AluJo SINE Alu -13 299 1 256 286 37 55 chr10 5591210 5591301 -134725464 - L1MD1 LINE L1 -382 5739 5648 2126 116 0 0 chr10 5591301 5591602 -134725163 - AluSx SINE Alu -11 301 1 256 286 37 55 chr10 5591602 5591746 -134725019 - L1MD1 LINE L1 -473 5648 5506 816 188 0 7 chr10 5591807 5591951 -134724814 + MLT1D LTR MaLR 363 505 0 26 0 0 0 chr10 5592212 5592238 -134724527 + AT_rich Low_complexity Low_complexity 1 26 0 198 323 62 21 chr10 5593187 5593283 -134723482 + L2 LINE L2 3199 3298 -15 1987 146 0 3 chr10 5593425 5593734 -134723031 + AluSx SINE Alu 1 308 -4 378 42 0 0 chr10 5594124 5594172 -134722593 + (CA)n Simple_repeat Simple_repeat 2 49 0 611 152 163 20 chr10 5594578 5594750 -134722015 - MER66A LTR ERV1 -261 341 97 239 250 0 0 chr10 5595091 5595143 -134721622 - MIR SINE MIR -139 123 72 1555 178 93 77 chr10 5595368 5595835 -134720930 + MER66A LTR ERV1 97 478 0 7682 198 71 44 chr10 5596011 5596518 -134720247 + MER66A-int LTR ERV1 197 689 -5987 1530 172 59 0 chr10 5596518 5596791 -134719974 - AluSg SINE Alu -21 289 1 7682 198 71 44 chr10 5596791 5597658 -134719107 + MER66A-int LTR ERV1 689 1635 -5041 1572 171 20 7 chr10 5597658 5597951 -134718814 + AluJo SINE Alu 1 297 -15 7682 198 71 44 chr10 5597951 5598443 -134718322 + MER66A-int LTR ERV1 1635 2113 -4563 4374 211 39 19 chr10 5598553 5599442 -134717323 + MER66A-int LTR ERV1 2342 3248 -3428 318 176 0 40 chr10 5599432 5599506 -134717259 + LTR38-int LTR ERV1 1407 1477 -309 * 21 36 0 0 chr10 5599549 5599577 -134717188 + AT_rich Low_complexity Low_complexity 1 28 0 266 250 22 33 chr10 5700189 5700281 -134616484 + GA-rich Low_complexity Low_complexity 6 96 0 1597 179 31 0 chr10 5700571 5700861 -134615904 + AluJo SINE Alu 1 299 -13 758 146 0 24 chr10 5702165 5702288 -134614477 + AluJ SINE Alu 16 135 -177 1488 220 25 22 chr10 5702693 5703057 -134613708 - MLT1A1 LTR MaLR 0 365 1 315 255 36 0 chr10 5703375 5703502 -134613263 + L1ME3A LINE L1 5862 5995 -169 256 307 13 0 chr10 5703534 5703609 -134613156 + L1ME3A LINE L1 6068 6143 -27 818 176 0 0 chr10 5704125 5704261 -134612504 + AluJ SINE Alu 133 268 -44 718 80 0 18 chr10 5704306 5704419 -134612346 + (GGAA)n Simple_repeat Simple_repeat 2 112 0 1047 136 11 17 chr10 5705116 5705293 -134611472 - AluJo SINE Alu -18 294 119 253 338 69 25 chr10 5705612 5705772 -134610993 + MIR3 SINE MIR 20 186 -22 335 77 0 19 chr10 5706778 5706830 -134609935 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1699 150 11 0 chr10 5706876 5707142 -134609623 - AluJo SINE Alu -43 269 1 180 125 0 0 chr10 5708775 5708807 -134607958 - MIR SINE MIR -119 143 112 228 185 0 65 chr10 5709924 5710016 -134606749 + GA-rich Low_complexity Low_complexity 2 87 0 968 106 17 22 chr10 5710016 5710196 -134606569 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 192 302 23 35 chr10 5710770 5710856 -134605909 + L2 LINE L2 3185 3269 -3 2272 100 0 0 chr10 5710977 5711276 -134605489 - AluSc SINE Alu -10 299 1 271 304 99 31 chr10 5711965 5712126 -134604639 - L2 LINE L2 0 3272 3101 1724 145 3 63 chr10 5712128 5712460 -134604305 + AluJb SINE Alu 1 312 0 2253 98 10 0 chr10 5712654 5712959 -134603806 + AluSx SINE Alu 1 308 -4 2421 93 3 0 chr10 5714334 5714644 -134602121 - AluSx SINE Alu 0 312 2 318 50 0 0 chr10 5714644 5714684 -134602081 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 227 263 158 0 chr10 5715059 5715154 -134601611 - MIR SINE MIR -13 249 140 203 370 14 0 chr10 5715417 5715490 -134601275 + MIR SINE MIR 169 242 -20 360 242 0 0 chr10 5717192 5717287 -134599478 + (CAGG)n Simple_repeat Simple_repeat 3 97 0 339 342 57 0 chr10 5717759 5717911 -134598854 + MIR SINE MIR 6 168 -40 270 264 50 25 chr10 5718050 5718171 -134598594 - MIR SINE MIR -80 182 59 201 196 22 0 chr10 5718710 5718756 -134598009 + (TGAA)n Simple_repeat Simple_repeat 3 49 0 2029 152 7 0 chr10 5720905 5721208 -134595557 + AluSx SINE Alu 1 305 -7 229 286 0 14 chr10 5721233 5721303 -134595462 - MIR SINE MIR -86 122 54 1206 122 0 12 chr10 5721808 5721972 -134594793 + AluJb SINE Alu 138 299 -13 1540 148 41 10 chr10 5722051 5722342 -134594423 + L1MA9 LINE L1 6012 6311 -1 23 0 0 0 chr10 5722345 5722368 -134594397 + AT_rich Low_complexity Low_complexity 1 23 0 1315 148 0 37 chr10 5722972 5723188 -134593577 + AluJb SINE Alu 86 293 -19 2293 78 0 14 chr10 5723416 5723711 -134593054 - AluSc SINE Alu -18 291 1 24 0 0 0 chr10 5723729 5723753 -134593012 + AT_rich Low_complexity Low_complexity 1 24 0 288 229 48 0 chr10 5723775 5723858 -134592907 - ORSL DNA AcHobo -157 118 32 192 347 67 0 chr10 5724170 5724245 -134592520 + MIR SINE MIR 84 163 -99 556 99 0 12 chr10 5724551 5724632 -134592133 + MADE1 DNA Mariner 1 80 0 1837 152 0 49 chr10 5724824 5725152 -134591613 + AluJo SINE Alu 1 312 0 385 313 39 34 chr10 5725827 5726006 -134590759 + MIR3 SINE MIR 23 202 -6 696 127 0 0 chr10 5727166 5727276 -134589489 + (CA)n Simple_repeat Simple_repeat 1 110 0 572 210 25 0 chr10 5728508 5728753 -134588012 + GA-rich Low_complexity Low_complexity 1 251 0 229 225 56 0 chr10 5728860 5728931 -134587834 - L1ME LINE L1 -516 5605 5531 391 175 75 0 chr10 5729476 5729556 -134587209 - MER20 DNA MER1_type -86 133 48 210 139 116 0 chr10 5729679 5729722 -134587043 - L2 LINE L2 0 3272 3225 1489 162 97 35 chr10 5731841 5732131 -134584634 - AluJo SINE Alu -4 308 1 1765 99 0 0 chr10 5732151 5732374 -134584391 - AluSx SINE Alu -89 223 1 519 160 135 58 chr10 5732390 5732546 -134584219 - MER2 DNA MER2_type -135 210 43 341 239 22 22 chr10 5733362 5733454 -134583311 - L1ME4a LINE L1 -74 6047 5956 1426 142 191 0 chr10 5733807 5734095 -134582670 + MER7A DNA MER2_type 5 345 -1 389 261 137 6 chr10 5734397 5734558 -134582207 + MIR SINE MIR 44 225 -37 1777 157 15 0 chr10 5735580 5735854 -134580911 - AluJo SINE Alu -21 291 14 1478 198 16 39 chr10 5738115 5738423 -134578342 - AluJo SINE Alu -11 301 1 2134 108 0 3 chr10 5738542 5738828 -134577937 - AluSx SINE Alu -20 292 8 2655 45 0 13 chr10 5739051 5739364 -134577401 - AluY SINE Alu -2 309 1 301 118 0 0 chr10 5739597 5739648 -134577117 + Alu SINE Alu 251 301 -1 584 201 30 0 chr10 5739656 5739790 -134576975 - L1MB5 LINE L1 -46 6128 5991 256 313 30 0 chr10 5739801 5739900 -134576865 - L2 LINE L2 -34 3238 3137 2117 88 50 0 chr10 5739959 5740242 -134576523 + AluSg SINE Alu 1 297 -13 490 309 0 8 chr10 5740282 5740408 -134576357 - MIR SINE MIR -91 171 47 1376 198 64 28 chr10 5740414 5740574 -134576191 - L1MB5 LINE L1 -193 5981 5828 2335 68 20 0 chr10 5740574 5740866 -134575899 - AluY SINE Alu -13 298 1 1376 198 64 28 chr10 5740866 5741063 -134575702 - L1MB5 LINE L1 -346 5828 5611 1032 199 38 4 chr10 5741063 5741299 -134575466 - AluJb SINE Alu -5 307 64 2082 126 0 11 chr10 5741420 5741740 -134575025 + AluSx SINE Alu 1 317 0 730 201 65 15 chr10 5741824 5742060 -134574705 + MLT1G LTR MaLR 247 590 0 22 0 0 0 chr10 5742181 5742203 -134574562 + AT_rich Low_complexity Low_complexity 1 22 0 2275 99 20 0 chr10 5742208 5742511 -134574254 + AluSq SINE Alu 1 309 -4 1694 121 16 39 chr10 5742525 5742781 -134573984 + AluSx SINE Alu 3 252 -60 286 118 0 0 chr10 5742955 5743006 -134573759 + AluSx SINE Alu 251 301 0 297 308 55 55 chr10 5743270 5743582 -134573183 - L1ME LINE L1 -5652 418 107 1708 183 7 0 chr10 5743609 5743888 -134572877 - AluJb SINE Alu -23 289 9 1145 151 5 15 chr10 5744021 5744220 -134572545 - MER50-int LTR ERV1 -6724 481 285 215 269 0 0 chr10 5744396 5744448 -134572317 + L2 LINE L2 2599 2650 -664 2453 85 3 0 chr10 5744448 5744753 -134572012 - AluSp SINE Alu -7 306 1 2103 127 6 16 chr10 5744761 5745076 -134571689 - AluSx SINE Alu 0 312 1 215 270 132 78 chr10 5745229 5745433 -134571332 + L2 LINE L2 2856 3070 -243 633 165 1 46 chr10 5745439 5745584 -134571181 + L1MA6 LINE L1 5823 5956 -210 2368 97 0 0 chr10 5745589 5745879 -134570886 + AluSg SINE Alu 18 307 -3 436 190 123 43 chr10 5746782 5747035 -134569730 + L1ME LINE L1 530 802 -5268 2167 103 13 0 chr10 5747133 5747433 -134569332 + AluSc SINE Alu 1 304 -5 250 115 97 0 chr10 5747433 5747492 -134569273 + AluSg/x SINE Alu 132 189 -111 2338 233 88 63 chr10 5747698 5748751 -134568014 + L1M4 LINE L1 4005 5030 -1116 2281 91 7 0 chr10 5748751 5749049 -134567716 + AluY SINE Alu 1 300 -11 2338 233 88 63 chr10 5749049 5749137 -134567628 + L1M4 LINE L1 5030 5114 -1032 2042 134 7 3 chr10 5749137 5749427 -134567338 + AluSx SINE Alu 1 291 -21 2338 233 88 63 chr10 5749427 5749492 -134567273 + L1M4 LINE L1 5114 5242 -904 5432 65 9 9 chr10 5750909 5750927 -134565838 + L1PA7 LINE L1 5319 5336 -818 2136 116 0 3 chr10 5750927 5751211 -134565554 + AluSx SINE Alu 2 284 -28 5432 65 9 9 chr10 5751211 5751932 -134564833 + L1PA7 LINE L1 5335 6058 -96 24 0 0 0 chr10 5752202 5752226 -134564539 + AT_rich Low_complexity Low_complexity 1 24 0 2201 121 19 10 chr10 5752295 5752602 -134564163 + AluSq SINE Alu 1 310 -3 1796 150 4 4 chr10 5753485 5753752 -134563013 + AluSx SINE Alu 1 267 -45 2258 125 0 0 chr10 5754024 5754328 -134562437 - AluSx SINE Alu -4 308 5 1378 150 13 13 chr10 5754493 5754720 -134562045 + AluJb SINE Alu 25 251 -61 180 182 0 0 chr10 5754987 5755020 -134561745 - L3 LINE CR1 -1348 229 197 1323 163 30 49 chr10 5757091 5757355 -134559410 - AluJo SINE Alu -14 298 40 207 301 68 14 chr10 5757948 5758021 -134558744 - MIR3 SINE MIR -20 188 112 351 237 11 0 chr10 5758393 5758486 -134558279 + L1M3 LINE L1 4463 4556 -1590 2113 197 115 47 chr10 5758529 5759009 -134557756 + L1M3 LINE L1 4669 5115 -1068 777 174 0 36 chr10 5759009 5759147 -134557618 + FLAM_A SINE Alu 1 133 0 2113 197 115 47 chr10 5759147 5759293 -134557472 + L1M3 LINE L1 5115 5250 -933 2168 109 14 0 chr10 5759293 5759586 -134557179 + AluSp SINE Alu 1 297 -16 2113 197 115 47 chr10 5759586 5759825 -134556940 + L1M3 LINE L1 5250 5603 -580 669 106 7 78 chr10 5759935 5760056 -134556709 - L1M LINE L1 -783 5397 5286 2008 102 42 7 chr10 5760056 5760339 -134556426 - AluSx SINE Alu -19 293 1 669 106 7 78 chr10 5760339 5760359 -134556406 - L1M LINE L1 -894 5286 5266 190 240 60 0 chr10 5760416 5760466 -134556299 + L2 LINE L2 3183 3235 -78 198 0 0 0 chr10 5760466 5760488 -134556277 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2272 95 17 3 chr10 5760506 5760802 -134555963 + AluSx SINE Alu 1 300 -12 490 208 2 97 chr10 5760836 5760933 -134555832 + L1ME2 LINE L1 6005 6084 -82 2214 107 0 0 chr10 5760933 5761214 -134555551 + AluSx SINE Alu 16 296 -16 490 208 2 97 chr10 5761214 5761289 -134555476 + L1ME2 LINE L1 6084 6165 -1 2270 104 0 31 chr10 5761320 5761637 -134555128 + AluSg1 SINE Alu 1 307 -2 673 179 179 21 chr10 5761646 5761724 -134555041 + AluJo SINE Alu 2 66 -246 186 43 0 0 chr10 5761724 5761747 -134555018 + (CAGAC)n Simple_repeat Simple_repeat 5 27 0 673 179 179 21 chr10 5761747 5761797 -134554968 + AluJo SINE Alu 66 107 -205 1649 169 3 44 chr10 5761797 5762093 -134554672 + AluJb SINE Alu 21 304 -8 673 179 179 21 chr10 5762093 5762108 -134554657 + AluJo SINE Alu 107 169 -143 410 135 189 0 chr10 5762477 5762551 -134554214 + AluSg1 SINE Alu 2 89 -220 1413 147 0 22 chr10 5762651 5762883 -134553882 - AluJb SINE Alu -85 227 1 258 155 52 0 chr10 5762884 5762942 -134553823 + L1MB5 LINE L1 6114 6174 0 298 341 82 16 chr10 5763940 5764122 -134552643 - MIR SINE MIR -16 246 53 224 120 20 40 chr10 5764155 5764205 -134552560 + A-rich Low_complexity Low_complexity 4 52 0 1862 148 173 0 chr10 5764629 5764994 -134551771 - MSTA LTR MaLR 0 428 1 1205 36 0 7 chr10 5765217 5765354 -134551411 + AluSg SINE Alu 2 137 -173 1658 50 0 15 chr10 5765360 5765559 -134551206 + AluY SINE Alu 86 323 0 379 0 0 0 chr10 5765559 5765601 -134551164 + (TAAA)n Simple_repeat Simple_repeat 2 160 0 1890 150 0 3 chr10 5765604 5765911 -134550854 + AluSx SINE Alu 1 306 -6 464 161 0 0 chr10 5765913 5765994 -134550771 + L1M LINE L1 5312 5392 -788 1908 113 3 7 chr10 5766009 5766315 -134550450 + AluSx SINE Alu 1 305 0 180 0 0 0 chr10 5766629 5766649 -134550116 + (TA)n Simple_repeat Simple_repeat 2 21 0 1610 184 0 3 chr10 5766977 5767270 -134549495 + AluJb SINE Alu 3 294 -18 1946 142 0 0 chr10 5767928 5768224 -134548541 - AluSx SINE Alu -14 298 3 2164 99 10 0 chr10 5768229 5768532 -134548233 - AluSx SINE Alu -6 306 1 874 182 18 6 chr10 5768532 5768697 -134548068 - AluJb SINE Alu -15 297 131 2254 89 10 0 chr10 5769524 5769827 -134546938 + AluSp SINE Alu 1 306 -7 1720 113 0 90 chr10 5769847 5769976 -134546789 + AluSx SINE Alu 12 151 -161 2078 105 7 3 chr10 5769976 5770270 -134546495 + AluSg SINE Alu 1 295 -15 1720 113 0 90 chr10 5770270 5770450 -134546315 + AluSx SINE Alu 151 293 -19 515 204 106 129 chr10 5771060 5771406 -134545359 + MLT1F LTR MaLR 166 555 0 206 311 0 0 chr10 5771406 5771467 -134545298 - L2 LINE L2 -819 2495 2435 1988 116 3 0 chr10 5771487 5771794 -134544971 + AluSq SINE Alu 1 308 0 1535 185 3 10 chr10 5772055 5772357 -134544408 + AluJb SINE Alu 1 300 -12 298 349 128 45 chr10 5772418 5772871 -134543894 - L2 LINE L2 -4 3268 2739 2232 90 13 0 chr10 5772871 5773171 -134543594 - AluSx SINE Alu -8 304 1 298 349 128 45 chr10 5773171 5773349 -134543416 - L2 LINE L2 -533 2739 2577 1096 123 12 0 chr10 5773499 5773669 -134543096 - AluSg/x SINE Alu -10 302 131 22 0 0 0 chr10 5773729 5773751 -134543014 + AT_rich Low_complexity Low_complexity 1 22 0 819 154 67 0 chr10 5773957 5774106 -134542659 - AluJo/FRAM SINE Alu -18 294 136 2077 107 0 3 chr10 5774108 5774398 -134542367 - AluSg1 SINE Alu -20 289 1 863 190 12 0 chr10 5774707 5774870 -134541895 + AluJb SINE Alu 135 299 -13 185 105 0 26 chr10 5776224 5776262 -134540503 + (TCCCC)n Simple_repeat Simple_repeat 2 38 0 242 206 147 15 chr10 5776953 5777021 -134539744 - MER5A DNA MER1_type -83 106 30 342 313 120 7 chr10 5777391 5777541 -134539224 - MIR SINE MIR -68 194 28 198 0 0 0 chr10 5777617 5777639 -134539126 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1998 113 0 0 chr10 5777652 5777926 -134538839 - AluSx SINE Alu -38 274 1 514 127 0 38 chr10 5778182 5778261 -134538504 - Tigger3(Golem) DNA MER2_type -729 2300 2225 2001 90 54 0 chr10 5778313 5778591 -134538174 - AluSc SINE Alu -16 293 1 1137 121 60 16 chr10 5778862 5779044 -134537721 + MER30B DNA MER1_type 1 190 0 181 397 0 15 chr10 5779081 5779149 -134537616 - MIR SINE MIR -195 67 1 638 118 20 92 chr10 5779375 5779413 -134537352 - L1MB3 LINE L1 0 6183 6144 2285 69 16 3 chr10 5779413 5779716 -134537049 - AluSq SINE Alu -6 307 1 638 118 20 92 chr10 5779716 5779829 -134536936 - L1MB3 LINE L1 -39 6144 6043 339 289 20 0 chr10 5779829 5779978 -134536787 - AluSg/x SINE Alu -11 291 140 342 279 62 93 chr10 5780214 5780472 -134536293 + L2 LINE L2 2891 3140 -132 2051 138 0 3 chr10 5780554 5780866 -134535899 + AluSx SINE Alu 1 311 -1 297 143 0 0 chr10 5781091 5781133 -134535632 + MER57A LTR ERV1 295 336 -67 2446 156 34 5 chr10 5781189 5781605 -134535160 - MSTB1 LTR MaLR -1 431 4 2093 103 0 0 chr10 5782072 5782390 -134534375 + AluSx SINE Alu 1 318 0 1087 156 23 37 chr10 5782632 5782850 -134533915 - MER20 DNA MER1_type -4 215 1 2106 118 0 22 chr10 5783177 5783492 -134533273 + AluSx SINE Alu 1 308 -4 2168 86 0 13 chr10 5783500 5783803 -134532962 + AluSg SINE Alu 1 299 -11 26 30 0 0 chr10 5784076 5784109 -134532656 + AT_rich Low_complexity Low_complexity 1 33 0 1709 76 167 8 chr10 5784111 5784362 -134532403 + AluSg SINE Alu 1 291 -9 1371 161 95 0 chr10 5784373 5784646 -134532119 + AluJb SINE Alu 1 299 -13 2080 93 6 29 chr10 5784991 5785304 -134531461 + AluSc SINE Alu 4 309 0 2145 75 34 17 chr10 5785337 5785631 -134531134 + AluSg SINE Alu 1 299 -11 285 250 125 0 chr10 5785755 5785843 -134530922 - MER103 DNA DNA 0 166 68 315 300 119 92 chr10 5785843 5785949 -134530816 + L1ME LINE L1 5553 5655 -507 1726 158 49 0 chr10 5785949 5786233 -134530532 + AluJb SINE Alu 1 298 -14 1936 145 3 0 chr10 5786235 5786539 -134530226 + AluSx SINE Alu 1 305 -7 315 300 119 92 chr10 5786539 5786656 -134530109 + L1ME LINE L1 5655 5785 -377 2155 95 10 0 chr10 5786801 5787106 -134529659 - AluSp SINE Alu -4 309 2 442 279 71 63 chr10 5787247 5787501 -134529264 + HAL1 LINE L1 19 274 -2233 2080 102 3 0 chr10 5787749 5788042 -134528723 - AluSp SINE Alu -19 294 1 1064 88 0 0 chr10 5788042 5788178 -134528587 - AluSq/x SINE Alu -177 136 1 373 223 109 63 chr10 5788205 5788380 -134528385 + MLT1J LTR MaLR 281 463 -48 911 169 0 0 chr10 5788380 5788540 -134528225 - FRAM SINE Alu -12 164 5 529 235 129 42 chr10 5789158 5789375 -134527390 + MLT1H LTR MaLR 109 344 -205 322 207 0 0 chr10 5789449 5789507 -134527258 + MLT1H LTR MaLR 492 549 0 1629 140 0 111 chr10 5789583 5789925 -134526840 + AluJo SINE Alu 1 304 -8 2257 78 10 0 chr10 5789986 5790280 -134526485 + AluSx SINE Alu 1 297 -15 374 251 113 88 chr10 5790864 5791103 -134525662 + L1MC4a LINE L1 5600 5844 -1964 2106 100 7 0 chr10 5791405 5791696 -134525069 + AluSx SINE Alu 1 293 -19 286 286 99 11 chr10 5792002 5792093 -134524672 + L2 LINE L2 1089 1187 -2127 184 280 0 67 chr10 5792159 5792234 -134524531 + MER5A DNA MER1_type 5 74 -115 418 283 44 0 chr10 5792238 5792397 -134524368 + L1MB1 LINE L1 5992 6157 -11 265 250 0 0 chr10 5792397 5792449 -134524316 + LTR30 LTR ERV1 1 52 -670 1844 85 229 178 chr10 5792449 5792955 -134523810 + LTR12 LTR ERV1 53 584 -130 10485 91 10 8 chr10 5792965 5794387 -134522378 + HERV9 LTR ERV1 1277 2700 -5699 2157 65 29 0 chr10 5794487 5794766 -134521999 + AluSp SINE Alu 23 309 -4 901 143 0 0 chr10 5794768 5794901 -134521864 + AluSg/x SINE Alu 134 266 -44 517 341 81 0 chr10 5794906 5795129 -134521636 + L3 LINE CR1 1028 1268 -309 675 248 94 71 chr10 5795158 5795412 -134521353 + MIR SINE MIR 3 262 0 264 178 27 27 chr10 5795574 5795647 -134521118 + L1ME1 LINE L1 6089 6161 -5 358 249 254 46 chr10 5795655 5795852 -134520913 + L1MC4a LINE L1 5941 6178 -1630 180 0 0 0 chr10 5795959 5795979 -134520786 + (A)n Simple_repeat Simple_repeat 1 20 0 1580 179 4 0 chr10 5796008 5796288 -134520477 - AluJo SINE Alu -26 286 6 2214 99 0 10 chr10 5796880 5797183 -134519582 + AluSx SINE Alu 1 300 -12 701 273 24 0 chr10 5797186 5797351 -134519414 - MER58A DNA MER1_type -30 194 26 533 234 117 17 chr10 5797374 5797605 -134519160 + L1ME3A LINE L1 5808 6061 -109 2165 118 0 3 chr10 5797622 5797926 -134518839 + AluSx SINE Alu 1 303 -9 626 164 164 0 chr10 5798392 5798563 -134518202 - Charlie1 DNA MER1_type -5 2756 2558 1326 163 0 25 chr10 5798577 5798817 -134517948 - AluJb SINE Alu -15 297 64 2328 184 58 28 chr10 5798830 5799412 -134517353 - Charlie1 DNA MER1_type -217 2544 1945 270 273 105 49 chr10 5802542 5802685 -134514080 - L2 LINE L2 -186 3086 2936 183 292 42 0 chr10 5802805 5802853 -134513912 - L2 LINE L2 -570 2744 2695 2249 106 0 0 chr10 5802868 5803171 -134513594 - AluSx SINE Alu -9 303 1 207 0 0 0 chr10 5803384 5803407 -134513358 + (TG)n Simple_repeat Simple_repeat 2 24 0 1995 108 9 49 chr10 5803417 5803742 -134513023 - AluSx SINE Alu 0 312 1 1633 162 45 3 chr10 5803789 5804079 -134512686 - AluJb SINE Alu -10 302 1 319 308 0 26 chr10 5804635 5804752 -134512013 + MLT1J1 LTR MaLR 226 339 -107 283 230 54 0 chr10 5804808 5804882 -134511883 + MLT1J1 LTR MaLR 364 441 -5 22 0 0 0 chr10 5805032 5805054 -134511711 + AT_rich Low_complexity Low_complexity 1 22 0 369 265 104 42 chr10 5805817 5805995 -134510770 - MIR3 SINE MIR -51 211 3 194 0 39 0 chr10 5807074 5807100 -134509665 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1810 126 3 18 chr10 5807102 5807387 -134509378 - AluSx SINE Alu -31 281 1 2054 92 23 10 chr10 5808499 5808804 -134507961 + AluSq SINE Alu 1 309 -4 1619 157 21 14 chr10 5808811 5809091 -134507674 + AluJo SINE Alu 1 282 -30 246 357 20 0 chr10 5809198 5809296 -134507469 - L2 LINE L2 -221 3051 2952 697 190 20 77 chr10 5809331 5809490 -134507275 - MER53 DNA DNA -5 184 36 1980 136 0 13 chr10 5809490 5809806 -134506959 - AluSx SINE Alu 0 312 1 697 190 20 77 chr10 5809806 5809841 -134506924 - MER53 DNA DNA -153 36 1 488 290 103 60 chr10 5809968 5810316 -134506449 - MLT1J2 LTR MaLR -24 426 64 2354 87 0 0 chr10 5810321 5810630 -134506135 + AluSg SINE Alu 1 309 -1 1458 163 22 22 chr10 5810738 5810858 -134505907 + AluJb SINE Alu 11 130 -182 2304 91 0 0 chr10 5810858 5811155 -134505610 + AluSx SINE Alu 1 297 -15 1458 163 22 22 chr10 5811155 5811311 -134505454 + AluJb SINE Alu 129 287 -25 1962 145 3 0 chr10 5811588 5811891 -134504874 + AluSx SINE Alu 1 304 -8 199 311 0 0 chr10 5811918 5811963 -134504802 - MIR SINE MIR -137 125 81 1130 139 6 0 chr10 5812481 5812654 -134504111 + AluJo SINE Alu 1 174 -138 2317 211 56 36 chr10 5812754 5813124 -134503641 + L1ME2 LINE L1 5453 5843 -321 1951 133 3 0 chr10 5813124 5813418 -134503347 + AluSq SINE Alu 1 295 -18 2317 211 56 36 chr10 5813418 5813690 -134503075 + L1ME2 LINE L1 5843 6108 -56 29 28 0 0 chr10 5813690 5813726 -134503039 + AT_rich Low_complexity Low_complexity 1 36 0 10369 90 69 4 chr10 5813726 5815367 -134501398 - L1PBa LINE L1 -3802 3060 1311 373 169 0 0 chr10 5815370 5815429 -134501336 - L1PBa LINE L1 -5705 1158 1100 21 57 0 0 chr10 5815466 5815501 -134501264 + AT_rich Low_complexity Low_complexity 1 35 0 2092 130 0 3 chr10 5815841 5816148 -134500617 - AluSx SINE Alu -6 306 1 2170 95 17 0 chr10 5816637 5816932 -134499833 - AluSx SINE Alu -7 305 6 2053 114 3 10 chr10 5817697 5817994 -134498771 + AluSq SINE Alu 5 299 -14 541 176 231 0 chr10 5818661 5818769 -134497996 - FLAM_C SINE Alu 0 133 1 339 118 88 137 chr10 5818917 5818965 -134497800 + Tigger2 DNA MER2_type 1 43 -2675 1347 130 74 9 chr10 5818965 5819181 -134497584 + MER30 DNA MER1_type 1 230 0 339 118 88 137 chr10 5819181 5819234 -134497531 + Tigger2 DNA MER2_type 43 97 -2621 1925 127 3 20 chr10 5819237 5819537 -134497228 - AluSx SINE Alu -17 295 1 1590 151 52 17 chr10 5819579 5819870 -134496895 - AluJo SINE Alu -11 301 1 849 211 0 61 chr10 5819876 5820056 -134496709 - FAM SINE Alu -6 169 1 3530 132 78 8 chr10 5820056 5820668 -134496097 + Tigger2 DNA MER2_type 90 744 -1974 883 144 25 80 chr10 5820734 5820832 -134495933 + Tigger2 DNA MER2_type 2451 2534 -174 1959 136 0 7 chr10 5820832 5821133 -134495632 + AluSq SINE Alu 1 299 -14 883 144 25 80 chr10 5821133 5821235 -134495530 + Tigger2 DNA MER2_type 2534 2640 -68 640 159 9 0 chr10 5821237 5821344 -134495421 - Tigger1 DNA MER2_type -734 1684 1577 691 193 0 30 chr10 5821344 5821479 -134495286 + FLAM_C SINE Alu 1 131 -2 1147 176 36 40 chr10 5821517 5821767 -134494998 + AluJo SINE Alu 38 286 -26 464 298 105 34 chr10 5822109 5822347 -134494418 + MIR SINE MIR 7 261 -1 583 222 0 17 chr10 5822430 5822547 -134494218 + L2 LINE L2 3192 3306 -7 1471 152 50 21 chr10 5822886 5823169 -134493596 - AluJb SINE Alu -21 291 1 699 168 0 9 chr10 5823396 5823509 -134493256 + FLAM_C SINE Alu 2 113 -30 391 283 65 14 chr10 5824076 5824214 -134492551 - L2 LINE L2 -6 3266 3122 408 372 5 16 chr10 5824287 5824475 -134492290 - MIR SINE MIR -69 193 8 1926 125 3 0 chr10 5824503 5824791 -134491974 + AluJb SINE Alu 2 290 -22 555 235 62 0 chr10 5825791 5825953 -134490812 + L1ME LINE L1 5177 5348 -798 598 144 161 34 chr10 5826010 5826128 -134490637 - FLAM_C SINE Alu 0 133 1 1161 228 172 3 chr10 5826150 5826505 -134490260 + L1ME LINE L1 5386 5800 -370 494 296 123 0 chr10 5826516 5826678 -134490087 + MER5A DNA MER1_type 3 184 -5 254 174 43 0 chr10 5826686 5826732 -134490033 + MER5A DNA MER1_type 2 49 -140 1421 170 4 18 chr10 5826743 5827020 -134489745 + AluJb SINE Alu 9 281 -31 707 205 24 0 chr10 5827052 5827179 -134489586 + MER5A DNA MER1_type 56 185 -4 253 161 214 0 chr10 5827184 5827240 -134489525 - MER5A DNA MER1_type -114 75 8 2280 92 3 0 chr10 5827287 5827592 -134489173 + AluSx SINE Alu 1 306 -6 739 192 58 12 chr10 5828203 5828375 -134488390 - L1MA10 LINE L1 -11 6323 6144 2037 135 0 3 chr10 5828523 5828827 -134487938 + AluSx SINE Alu 1 303 -9 1651 154 26 7 chr10 5828913 5829218 -134487547 + AluSx SINE Alu 1 311 -1 1648 173 16 7 chr10 5829279 5829585 -134487180 + AluJo SINE Alu 3 311 -1 1941 152 0 0 chr10 5829590 5829899 -134486866 + AluSx SINE Alu 4 312 0 247 230 292 6 chr10 5829918 5830079 -134486686 + L1MC4 LINE L1 7689 7895 -147 1493 178 176 69 chr10 5831112 5831162 -134485603 + Charlie1a DNA MER1_type 65 108 -2653 2101 108 7 7 chr10 5831162 5831468 -134485297 - AluSq SINE Alu -7 306 1 1493 178 176 69 chr10 5831468 5831613 -134485152 + Charlie1a DNA MER1_type 108 236 -2525 1857 140 3 3 chr10 5831613 5831906 -134484859 + AluSp SINE Alu 5 297 -16 1493 178 176 69 chr10 5831906 5831944 -134484821 + Charlie1a DNA MER1_type 236 269 -2492 1646 171 11 0 chr10 5831944 5832231 -134484534 + AluSx SINE Alu 1 290 -22 1493 178 176 69 chr10 5832231 5832534 -134484231 + Charlie1a DNA MER1_type 269 661 -794 2157 91 0 0 chr10 5832534 5832819 -134483946 + AluSc SINE Alu 1 285 -24 541 82 61 10 chr10 5832919 5833017 -134483748 + HERV17 LTR ERV1 3037 3139 -5260 6308 91 8 11 chr10 5833024 5833892 -134482873 + HERV17 LTR ERV1 4080 4944 -3455 2063 132 77 90 chr10 5833893 5834815 -134481950 + HERV17 LTR ERV1 703 1740 -5156 * 5642 92 8 12 chr10 5834813 5835586 -134481179 + HERV17 LTR ERV1 7626 8395 -4 250 269 0 0 chr10 5835591 5835643 -134481122 + LTR30 LTR ERV1 1 52 -670 1031 77 8 0 chr10 5835643 5835773 -134480992 + LTR12 LTR ERV1 53 183 -531 289 93 0 0 chr10 5835756 5835799 -134480966 + pTR5 LTR ERV1 1963 2005 -433 * 357 204 45 68 chr10 5835799 5835931 -134480834 + LTR30 LTR ERV1 552 723 -71 1338 132 14 7 chr10 5835931 5836137 -134480628 + LTR12 LTR ERV1 276 581 -133 1273 94 124 0 chr10 5836171 5836373 -134480392 - MER30 DNA MER1_type 0 230 4 686 233 14 0 chr10 5836375 5836521 -134480244 + L1MA10 LINE L1 6186 6333 -1 249 254 56 0 chr10 5836535 5836606 -134480159 + MER5A DNA MER1_type 62 136 -53 541 259 73 0 chr10 5836647 5836852 -134479913 + L2 LINE L2 1301 1520 -1794 755 106 89 0 chr10 5837000 5837123 -134479642 - L1PA16 LINE L1 -9 6157 6024 212 236 145 21 chr10 5837264 5837434 -134479331 + L2 LINE L2 1638 1876 -1438 1724 129 71 4 chr10 5837588 5837868 -134478897 - AluJo SINE Alu -13 299 1 2114 85 3 0 chr10 5838288 5838611 -134478154 + AluSp SINE Alu 1 324 0 182 235 82 71 chr10 5839145 5839243 -134477522 + L2 LINE L2 1903 2001 -1313 1992 130 7 0 chr10 5839380 5839681 -134477084 + AluSx SINE Alu 1 303 -9 2312 73 0 0 chr10 5839750 5840039 -134476726 - AluY SINE Alu -22 289 1 1925 121 3 48 chr10 5840044 5840212 -134476553 - AluSx SINE Alu -12 300 151 2151 100 0 3 chr10 5840212 5840512 -134476253 - AluY SINE Alu -11 300 2 1925 121 3 48 chr10 5840512 5840657 -134476108 - AluSx SINE Alu -161 151 1 308 184 53 13 chr10 5840687 5840763 -134476002 + L1ME4a LINE L1 5998 6076 -45 2073 105 7 0 chr10 5841084 5841370 -134475395 - AluSc SINE Alu -19 290 3 259 258 15 0 chr10 5842415 5842481 -134474284 + MIR SINE MIR 179 245 -17 24 0 0 0 chr10 5842515 5842539 -134474226 + AT_rich Low_complexity Low_complexity 1 24 0 681 280 14 14 chr10 5842553 5842764 -134474001 - L2 LINE L2 -104 3209 2999 1265 111 0 0 chr10 5842894 5843066 -134473699 - AluSg/x SINE Alu -10 302 131 180 0 0 0 chr10 5843066 5843086 -134473679 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2162 85 0 0 chr10 5843086 5843367 -134473398 - AluSx SINE Alu -31 281 1 222 161 36 36 chr10 5844035 5844091 -134472674 + A-rich Low_complexity Low_complexity 3 58 0 2058 134 0 0 chr10 5844290 5844596 -134472169 - AluSx SINE Alu -6 306 1 2026 109 41 0 chr10 5845701 5845994 -134470771 + AluSg SINE Alu 1 305 -5 2112 99 20 0 chr10 5846375 5846667 -134470098 + AluSx SINE Alu 1 298 -14 1782 127 6 47 chr10 5847079 5847401 -134469364 + AluSx SINE Alu 1 309 -3 210 179 21 53 chr10 5847684 5847779 -134468986 + (CAAA)n Simple_repeat Simple_repeat 3 94 0 1553 115 51 0 chr10 5847950 5848184 -134468581 + AluSg SINE Alu 61 306 -4 2111 103 20 0 chr10 5848564 5848856 -134467909 + AluSx SINE Alu 1 298 -14 1956 119 3 49 chr10 5849249 5849576 -134467189 + AluSx SINE Alu 1 312 0 2977 88 65 18 chr10 5849801 5850245 -134466520 - MER4C LTR ERV1 0 465 1 957 135 0 0 chr10 5850338 5850471 -134466294 - FLAM_C SINE Alu 0 133 1 39 0 0 37 chr10 5850771 5850807 -134465958 + AT_rich Low_complexity Low_complexity 1 37 -15 390 21 0 0 chr10 5850807 5850854 -134465911 + (TA)n Simple_repeat Simple_repeat 2 48 0 1916 96 0 41 chr10 5850854 5851062 -134465703 - AluSc SINE Alu -28 281 87 2308 71 7 0 chr10 5851062 5851359 -134465406 - AluY SINE Alu -12 299 1 1916 96 0 41 chr10 5851359 5851443 -134465322 - AluSc SINE Alu -222 87 1 39 0 0 37 chr10 5851443 5851459 -134465306 + AT_rich Low_complexity Low_complexity 35 52 0 1247 98 0 0 chr10 5851634 5851798 -134464967 + AluSg SINE Alu 1 164 -146 227 83 0 42 chr10 5851828 5851876 -134464889 + (CAAAAA)n Simple_repeat Simple_repeat 3 48 0 1722 142 69 0 chr10 5852692 5852967 -134463798 - AluSx SINE Alu -18 294 1 417 307 102 28 chr10 5853069 5853284 -134463481 - MIR SINE MIR -16 246 16 330 376 16 11 chr10 5853629 5853815 -134462950 + L2 LINE L2 2362 2548 -766 2203 111 0 9 chr10 5853821 5854137 -134462628 + AluSq SINE Alu 1 313 0 461 346 77 58 chr10 5854149 5854543 -134462222 + L2 LINE L2 2832 3236 -36 2313 69 0 7 chr10 5854543 5854848 -134461917 - AluY SINE Alu -2 309 7 461 346 77 58 chr10 5854848 5854881 -134461884 + L2 LINE L2 3236 3267 -5 355 302 116 32 chr10 5854910 5855099 -134461666 - L1 LINE L1 -751 5395 5191 2071 116 0 0 chr10 5855692 5855985 -134460780 + AluSx SINE Alu 12 304 -8 447 244 58 47 chr10 5856427 5856599 -134460166 - MIR SINE MIR -3 259 86 2065 81 0 39 chr10 5856747 5857054 -134459711 - AluSq SINE Alu -15 298 4 311 237 166 22 chr10 5857901 5858040 -134458725 + L1MD2 LINE L1 6053 6211 -148 25 31 0 0 chr10 5858615 5858647 -134458118 + GC_rich Low_complexity Low_complexity 1 32 0 227 182 26 52 chr10 5858712 5858789 -134457976 + (CCGGG)n Simple_repeat Simple_repeat 1 75 0 32 0 0 0 chr10 5859659 5859691 -134457074 + GC_rich Low_complexity Low_complexity 1 32 0 232 221 14 64 chr10 5859799 5859939 -134456826 + G-rich Low_complexity Low_complexity 2 134 0 196 296 111 68 chr10 5860333 5860495 -134456270 - MIR SINE MIR -20 242 74 2106 83 3 10 chr10 5860995 5861283 -134455482 - AluSx SINE Alu -26 286 1 1797 130 3 18 chr10 5862395 5862708 -134454057 + AluSx SINE Alu 1 309 0 409 265 96 42 chr10 5863787 5863966 -134452799 + MIR3 SINE MIR 3 211 -51 22 0 0 0 chr10 5864729 5864751 -134452014 + AT_rich Low_complexity Low_complexity 1 22 0 450 282 26 11 chr10 5864901 5865306 -134451459 - MLT1J1 LTR MaLR -5 441 37 1889 176 22 35 chr10 5867500 5867783 -134448982 - MLT1A1 LTR MaLR 0 365 87 2183 131 3 0 chr10 5867783 5868081 -134448684 - AluSx SINE Alu -13 299 1 1889 176 22 35 chr10 5868081 5868167 -134448598 - MLT1A1 LTR MaLR -278 87 1 257 0 30 0 chr10 5868672 5868705 -134448060 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 313 71 0 0 chr10 5869689 5869731 -134447034 - 5S rRNA rRNA -79 42 1 2227 142 0 0 chr10 5870186 5870496 -134446269 + AluSx SINE Alu 1 310 -2 2093 98 56 3 chr10 5870544 5870829 -134445936 - AluSq SINE Alu -13 300 1 2225 129 13 0 chr10 5870926 5871235 -134445530 - AluSq SINE Alu 0 313 1 218 337 36 12 chr10 5871435 5871518 -134445247 + L3b LINE CR1 1404 1488 -95 23 97 0 0 chr10 5871689 5871761 -134445004 + AT_rich Low_complexity Low_complexity 1 72 0 1164 126 0 6 chr10 5871865 5872024 -134444741 - AluSg/x SINE Alu -39 270 113 327 125 0 0 chr10 5872044 5872100 -134444665 - Alu SINE Alu -245 56 1 2351 77 7 0 chr10 5872703 5873000 -134443765 - AluSp SINE Alu -14 299 1 1632 141 87 7 chr10 5873427 5873704 -134443061 - AluJo SINE Alu -13 299 1 750 148 0 41 chr10 5873946 5874068 -134442697 + FLAM_C SINE Alu 2 118 -25 31 0 0 0 chr10 5874068 5874099 -134442666 + AT_rich Low_complexity Low_complexity 1 31 0 27 49 0 0 chr10 5874201 5874242 -134442523 + AT_rich Low_complexity Low_complexity 1 41 0 24 0 0 0 chr10 5874550 5874574 -134442191 + AT_rich Low_complexity Low_complexity 1 24 0 2058 126 3 7 chr10 5874606 5874932 -134441833 + AluSx SINE Alu 1 312 0 2218 109 3 10 chr10 5876334 5876636 -134440129 - AluSx SINE Alu -12 300 1 180 0 0 0 chr10 5876641 5876661 -134440104 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2431 215 11 70 chr10 5876661 5876844 -134439921 - L1M4 LINE L1 -3119 3027 2835 2126 151 0 0 chr10 5876844 5877143 -134439622 - AluSx SINE Alu -11 301 3 2431 215 11 70 chr10 5877143 5877713 -134439052 - L1M4 LINE L1 -3311 2835 2319 260 293 104 47 chr10 5877752 5877858 -134438907 - MIR SINE MIR -63 145 34 1929 97 0 34 chr10 5877966 5878234 -134438531 - AluSx SINE Alu -5 307 49 575 330 58 5 chr10 5878839 5879027 -134437738 - L3 LINE CR1 -1 1576 1379 262 287 41 49 chr10 5879025 5879147 -134437618 - MIR3 SINE MIR -87 121 1 * 2248 119 0 0 chr10 5879371 5879666 -134437099 + AluSx SINE Alu 1 295 -17 326 356 108 16 chr10 5881077 5881383 -134435382 - L2 LINE L2 -118 3195 2862 1976 131 10 13 chr10 5881451 5881749 -134435016 + AluSx SINE Alu 1 297 -15 366 250 117 51 chr10 5882034 5882230 -134434535 - MLT1A2 LTR MaLR -156 209 1 260 295 82 16 chr10 5883294 5883416 -134433349 - L1MB7 LINE L1 -9 6175 6046 423 284 216 21 chr10 5884215 5884409 -134432356 - MIR SINE MIR 0 262 31 646 263 72 0 chr10 5888098 5888292 -134428473 + Charlie1 DNA MER1_type 1787 1994 -767 1455 224 69 16 chr10 5888295 5888574 -134428191 + Charlie1 DNA MER1_type 2307 2619 -142 2264 120 0 0 chr10 5888574 5888865 -134427900 + AluSx SINE Alu 1 291 -21 1455 224 69 16 chr10 5888865 5889017 -134427748 + Charlie1 DNA MER1_type 2619 2761 0 3638 173 57 16 chr10 5889204 5889973 -134426792 - L1MC3 LINE L1 -18 7767 6967 366 271 90 23 chr10 5891263 5891436 -134425329 + MIR3 SINE MIR 6 190 -64 198 257 157 14 chr10 5891491 5891561 -134425204 - L2 LINE L2 0 3272 3193 2157 126 3 0 chr10 5892260 5892553 -134424212 - AluSx SINE Alu -18 294 1 203 56 56 0 chr10 5892932 5892968 -134423797 + A-rich Low_complexity Low_complexity 3 40 0 396 280 10 0 chr10 5893506 5893606 -134423159 - MIR3 SINE MIR -100 108 8 2169 115 10 0 chr10 5893940 5894236 -134422529 - AluSq SINE Alu -14 299 1 239 198 136 37 chr10 5894374 5894455 -134422310 + MIR SINE MIR 54 142 -66 815 131 0 16 chr10 5895311 5895433 -134421332 - FLAM_C SINE Alu -15 128 9 2266 109 23 0 chr10 5895481 5895784 -134420981 - AluSx SINE Alu -2 310 1 308 217 0 0 chr10 5896121 5896181 -134420584 - L1MB8 LINE L1 -18 6160 6101 265 293 75 45 chr10 5896347 5896480 -134420285 + MIR3 SINE MIR 1 137 -71 2378 108 0 3 chr10 5897160 5897467 -134419298 + AluSx SINE Alu 1 306 -6 2038 146 3 0 chr10 5897516 5897810 -134418955 - AluJo SINE Alu -7 305 11 428 289 78 8 chr10 5898461 5898589 -134418176 - L2 LINE L2 -16 3297 3161 915 262 23 0 chr10 5898924 5899138 -134417627 - MER58A DNA MER1_type -5 219 1 240 238 130 77 chr10 5899647 5899908 -134416857 - L1MC5 LINE L1 -384 7577 7303 1586 143 10 68 chr10 5900123 5900417 -134416348 - AluJb SINE Alu -19 293 17 312 291 156 33 chr10 5901041 5901234 -134415531 - L1MC4a LINE L1 -1487 6321 6153 1955 160 0 10 chr10 5901234 5901534 -134415231 + AluSx SINE Alu 3 299 -13 312 291 156 33 chr10 5901534 5901762 -134415003 - L1MC4a LINE L1 -1655 6153 5848 792 254 65 65 chr10 5901830 5902083 -134414682 - L1MC4a LINE L1 -1950 5858 5602 1818 156 7 3 chr10 5902083 5902387 -134414378 - AluJb SINE Alu 0 305 1 792 254 65 65 chr10 5902387 5902471 -134414294 - L1MC4a LINE L1 -2205 5603 5520 2304 120 0 0 chr10 5902476 5902777 -134413988 + AluSx SINE Alu 1 301 -11 2018 142 0 29 chr10 5903013 5903322 -134413443 - AluSx SINE Alu -12 300 1 2193 115 3 16 chr10 5903735 5904048 -134412717 - AluSx SINE Alu -3 309 1 1510 151 120 8 chr10 5904081 5904339 -134412426 - AluSg1 SINE Alu -9 300 14 21 0 0 0 chr10 5904346 5904367 -134412398 + AT_rich Low_complexity Low_complexity 1 21 0 256 248 62 69 chr10 5904368 5904513 -134412252 - MER112 DNA MER1_type -51 209 66 311 283 91 0 chr10 5904575 5904674 -134412091 + L1ME LINE L1 5671 5778 -343 317 342 90 0 chr10 5905250 5905405 -134411360 - MIR SINE MIR -19 243 75 23 0 0 0 chr10 5905597 5905620 -134411145 + AT_rich Low_complexity Low_complexity 1 23 0 28 48 0 0 chr10 5906886 5906928 -134409837 + AT_rich Low_complexity Low_complexity 1 42 0 626 168 62 62 chr10 5907120 5907281 -134409484 + AluJb SINE Alu 134 294 -18 205 291 204 67 chr10 5907287 5907404 -134409361 - L2 LINE L2 -668 2646 2546 883 216 22 0 chr10 5907404 5907589 -134409176 + MER5A DNA MER1_type 1 189 0 205 291 204 67 chr10 5907589 5908158 -134408607 - L2 LINE L2 -768 2546 1866 222 37 0 0 chr10 5908266 5908293 -134408472 + (TG)n Simple_repeat Simple_repeat 2 28 0 391 249 118 70 chr10 5908350 5908543 -134408222 + HAL1 LINE L1 845 1027 -1480 1649 93 19 5 chr10 5908543 5908758 -134408007 + AluSx SINE Alu 1 218 -94 391 249 118 70 chr10 5908758 5908896 -134407869 + HAL1 LINE L1 1027 1201 -1306 1920 144 37 3 chr10 5908896 5909195 -134407570 + AluSx SINE Alu 1 309 -3 391 249 118 70 chr10 5909195 5909260 -134407505 + HAL1 LINE L1 1201 1261 -1246 2273 97 0 0 chr10 5909286 5909575 -134407190 - AluY SINE Alu -22 289 1 232 167 0 0 chr10 5909711 5909759 -134407006 + Alu SINE Alu 255 302 0 388 270 44 73 chr10 5909759 5909856 -134406909 + HAL1 LINE L1 1190 1288 -1219 2343 87 0 0 chr10 5909856 5910145 -134406620 - AluY SINE Alu -22 289 1 388 270 44 73 chr10 5910145 5910251 -134406514 + HAL1 LINE L1 1288 1387 -1120 1709 134 19 11 chr10 5910253 5910521 -134406244 + AluJo SINE Alu 1 270 -42 275 246 115 71 chr10 5910702 5910954 -134405811 + HAL1 LINE L1 2245 2507 0 1739 158 4 7 chr10 5911231 5911504 -134405261 - AluJo SINE Alu -15 297 26 2441 109 0 0 chr10 5912863 5913175 -134403590 - AluSx SINE Alu 0 312 1 1039 275 67 73 chr10 5913792 5914461 -134402304 + PABL_B LTR ERV1 1 665 -2 386 238 69 10 chr10 5914468 5914569 -134402196 - MLT1L LTR MaLR -339 276 170 351 357 85 5 chr10 5914739 5914963 -134401802 - MIR SINE MIR -9 253 12 866 163 12 25 chr10 5915356 5915516 -134401249 - FRAM SINE Alu -17 159 2 2330 102 0 0 chr10 5916476 5916769 -134399996 + AluSx SINE Alu 1 293 -19 1895 138 24 3 chr10 5917331 5917620 -134399145 - AluJb SINE Alu -17 295 1 2295 107 0 0 chr10 5918510 5918808 -134397957 - AluSx SINE Alu -14 298 1 26 30 0 0 chr10 5918831 5918864 -134397901 + AT_rich Low_complexity Low_complexity 1 33 0 2283 104 3 0 chr10 5919756 5920045 -134396720 + AluSx SINE Alu 2 291 -21 535 144 72 0 chr10 5920217 5920314 -134396451 - L1PA16 LINE L1 -5 6161 6058 193 245 20 20 chr10 5920412 5920461 -134396304 - L2 LINE L2 -3 3310 3262 411 243 27 70 chr10 5920549 5920734 -134396031 + MLT1H LTR MaLR 107 283 -266 2269 104 0 16 chr10 5920796 5921112 -134395653 + AluY SINE Alu 1 311 0 903 145 45 73 chr10 5921112 5921282 -134395483 + AluSg/x SINE Alu 126 292 -18 1960 149 17 7 chr10 5921484 5921773 -134394992 + AluSx SINE Alu 1 292 -20 886 150 0 0 chr10 5921773 5921898 -134394867 - AluJo SINE Alu -182 130 3 363 259 54 45 chr10 5921911 5922023 -134394742 + MIR3 SINE MIR 53 165 -43 677 189 0 0 chr10 5923362 5923468 -134393297 + FLAM_C SINE Alu 2 107 -36 544 138 0 0 chr10 5924103 5924197 -134392568 - AluJ/FRAM SINE Alu -3 309 216 831 157 64 7 chr10 5924205 5924345 -134392420 - AluSq/x SINE Alu -164 148 1 842 152 0 45 chr10 5924402 5924534 -134392231 - FLAM_C SINE Alu -17 126 1 2284 101 3 0 chr10 5925042 5925339 -134391426 - AluSp SINE Alu -15 298 1 2434 96 0 0 chr10 5925954 5926255 -134390510 - AluSx SINE Alu -11 301 1 2312 109 0 31 chr10 5926880 5927201 -134389564 - AluSx SINE Alu -1 311 1 2281 125 0 0 chr10 5927211 5927514 -134389251 - AluSg SINE Alu -7 303 1 2200 126 3 0 chr10 5927523 5927832 -134388933 - AluSx SINE Alu -2 310 1 512 275 108 12 chr10 5927948 5928188 -134388577 + L1MC4a LINE L1 5636 5898 -1910 1890 171 0 3 chr10 5928323 5928627 -134388138 - AluSx SINE Alu -9 303 1 248 239 0 45 chr10 5928878 5928945 -134387820 + C-rich Low_complexity Low_complexity 4 67 0 907 119 8 15 chr10 5929111 5929245 -134387520 - FLAM_C SINE Alu 0 133 1 1712 153 0 67 chr10 5930740 5930852 -134385913 + AluJo SINE Alu 1 119 -193 2272 119 0 3 chr10 5930852 5931155 -134385610 - AluSx SINE Alu -10 302 1 1712 153 0 67 chr10 5931155 5931356 -134385409 + AluJo SINE Alu 119 293 -19 2304 117 0 0 chr10 5932250 5932550 -134384215 + AluSx SINE Alu 1 300 -12 1311 262 91 12 chr10 5932981 5933409 -134383356 + LTR40b LTR ERVL 1 462 0 1944 143 0 29 chr10 5934100 5934408 -134382357 - AluJo SINE Alu -13 299 1 288 326 30 30 chr10 5935486 5935618 -134381147 - MIR SINE MIR -111 151 20 2406 95 0 0 chr10 5935657 5935961 -134380804 - AluSx SINE Alu -8 304 1 1418 80 0 6 chr10 5936715 5936890 -134379875 + AluSq SINE Alu 87 260 -53 778 93 0 0 chr10 5936891 5936988 -134379777 - AluS SINE Alu -214 98 2 387 60 0 0 chr10 5937106 5937156 -134379609 + (CCTTG)n Simple_repeat Simple_repeat 2 51 0 2325 95 0 0 chr10 5937158 5937443 -134379322 - AluSc SINE Alu -24 285 1 183 265 157 20 chr10 5937537 5937639 -134379126 - L2 LINE L2 -2 3270 3155 2142 115 3 3 chr10 5937717 5938013 -134378752 + AluSx SINE Alu 1 296 -16 708 287 87 53 chr10 5938448 5938954 -134377811 - L1MCc LINE L1 -5185 1238 716 479 268 43 39 chr10 5938969 5939223 -134377542 - L1M4 LINE L1 -1306 4840 4586 308 56 33 89 chr10 5939234 5939324 -134377441 + (TTAAA)n Simple_repeat Simple_repeat 1 85 0 1684 154 50 18 chr10 5939324 5939604 -134377161 - AluJo SINE Alu -23 289 1 1354 234 37 23 chr10 5939607 5940039 -134376726 - L1M4 LINE L1 -1495 4651 4214 1136 199 44 17 chr10 5940038 5940335 -134376430 - L1MEc LINE L1 -4243 2153 1849 * 377 248 9 9 chr10 5940335 5940448 -134376317 - L1MEc LINE L1 -6004 201 89 1489 156 13 0 chr10 5940629 5940944 -134375821 - AluJo SINE Alu 0 372 55 197 264 99 22 chr10 5941508 5941599 -134375166 - L2 LINE L2 -21 3251 3154 221 344 65 42 chr10 5941953 5942168 -134374597 + L2 LINE L2 2544 2763 -551 354 67 0 0 chr10 5942295 5942374 -134374391 - Alu SINE Alu 0 319 241 841 225 34 41 chr10 5943176 5943443 -134373322 - L1M4 LINE L1 -1592 4554 4290 1934 194 35 28 chr10 5943444 5943926 -134372839 + L1ME1 LINE L1 4832 5316 -849 2022 112 0 0 chr10 5943965 5944232 -134372533 - AluSx SINE Alu -37 275 9 1144 217 56 11 chr10 5944243 5944529 -134372236 + L1ME1 LINE L1 5303 5601 -565 2328 116 0 0 chr10 5944535 5944846 -134371919 + AluSx SINE Alu 1 311 -1 33 0 0 0 chr10 5944846 5944879 -134371886 + AT_rich Low_complexity Low_complexity 1 33 0 520 206 0 11 chr10 5944881 5944973 -134371792 + AluJb SINE Alu 205 295 -17 1833 225 48 33 chr10 5944973 5945538 -134371227 + L1ME1 LINE L1 5596 6334 0 2213 101 3 29 chr10 5945545 5945861 -134370904 + AluSg SINE Alu 1 308 -2 22 0 0 0 chr10 5947409 5947431 -134369334 + GC_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr10 5948064 5948094 -134368671 + GC_rich Low_complexity Low_complexity 1 30 0 507 126 53 0 chr10 5948456 5948551 -134368214 + L1PA13 LINE L1 6064 6163 0 2162 121 3 10 chr10 5948556 5948869 -134367896 + AluSx SINE Alu 1 311 -1 414 276 34 63 chr10 5949211 5949450 -134367315 - L1ME LINE L1 -394 5727 5496 21 57 0 0 chr10 5949453 5949488 -134367277 + AT_rich Low_complexity Low_complexity 1 35 0 2394 97 0 0 chr10 5949862 5950162 -134366603 + AluSx SINE Alu 1 300 -12 2274 155 27 12 chr10 5950182 5950588 -134366177 + Tigger4(Zombi) DNA MER2_type 1 412 -2319 830 87 0 0 chr10 5950589 5950692 -134366073 + FLAM_C SINE Alu 1 103 -40 779 201 7 0 chr10 5950696 5950835 -134365930 - AluJo SINE Alu -149 163 24 4505 142 25 16 chr10 5950835 5951609 -134365156 + Tigger4(Zombi) DNA MER2_type 1207 1987 -744 2022 150 0 16 chr10 5951954 5952268 -134364497 - AluJb SINE Alu -3 309 1 3065 149 19 21 chr10 5952268 5952822 -134363943 + Tigger4(Zombi) DNA MER2_type 2177 2731 0 1949 211 67 19 chr10 5953494 5954014 -134362751 - L1MD2 LINE L1 -2 6357 5813 1591 203 53 58 chr10 5954090 5954468 -134362297 - MLT1C LTR MaLR 0 467 90 2263 109 0 3 chr10 5954468 5954772 -134361993 + AluSg SINE Alu 6 308 -2 1591 203 53 58 chr10 5954772 5954862 -134361903 - MLT1C LTR MaLR -377 90 1 2131 137 0 0 chr10 5955378 5955685 -134361080 - AluJb SINE Alu -5 307 1 1470 103 0 10 chr10 5956543 5956738 -134360027 - AluSx SINE Alu -119 193 1 1684 181 0 7 chr10 5957120 5957396 -134359369 - AluJo SINE Alu -38 274 1 783 205 56 0 chr10 5957483 5957644 -134359121 + MIR SINE MIR 89 258 -4 1819 174 3 0 chr10 5958423 5958721 -134358044 - AluJb SINE Alu -2 310 12 2203 123 7 10 chr10 5958833 5959143 -134357622 + AluSx SINE Alu 3 311 -1 262 278 0 14 chr10 5959360 5959432 -134357333 - AluY SINE Alu -17 284 214 1757 102 0 0 chr10 5959854 5960080 -134356685 + AluSq SINE Alu 74 299 -14 1764 106 75 4 chr10 5960188 5960443 -134356322 - AluSx SINE Alu -35 277 5 2177 85 14 7 chr10 5960811 5961117 -134355648 + AluY SINE Alu 1 308 0 182 292 42 14 chr10 5961521 5961593 -134355172 + L2 LINE L2 2735 2808 -506 3989 210 97 16 chr10 5962493 5963597 -134353168 + L1MC4 LINE L1 6469 7661 -381 414 228 350 5 chr10 5963638 5963844 -134352921 + L1MC4 LINE L1 7763 8039 -3 2169 119 3 0 chr10 5968679 5968973 -134347792 - AluSx SINE Alu -17 295 1 181 281 18 0 chr10 5969237 5969294 -134347471 + L3b LINE CR1 1315 1372 -211 1537 119 14 0 chr10 5969546 5969765 -134347000 + AluSx SINE Alu 5 226 -86 1997 122 0 4 chr10 5969867 5970146 -134346619 + AluSq SINE Alu 1 278 -35 270 0 0 0 chr10 5970147 5970177 -134346588 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 596 269 75 21 chr10 5970919 5971105 -134345660 + MIR SINE MIR 41 236 -26 21 36 0 0 chr10 5971514 5971542 -134345223 + AT_rich Low_complexity Low_complexity 1 28 0 298 325 35 9 chr10 5972540 5972654 -134344111 - MIR3 SINE MIR -45 163 47 304 254 5 42 chr10 5973237 5973337 -134343428 + MER5A DNA MER1_type 13 98 -80 378 228 8 63 chr10 5973379 5973506 -134343259 - MIR SINE MIR -141 121 2 184 250 42 0 chr10 5975226 5975274 -134341491 - L2 LINE L2 -80 3233 3184 2096 105 0 28 chr10 5977205 5977514 -134339251 + AluSc SINE Alu 1 301 0 1392 119 0 99 chr10 5977916 5978039 -134338726 + AluJb SINE Alu 1 88 -224 2354 75 3 0 chr10 5978039 5978332 -134338433 - AluSg SINE Alu -16 294 1 1392 119 0 99 chr10 5978332 5978461 -134338304 + AluJb SINE Alu 88 228 -84 1279 169 139 4 chr10 5979477 5979743 -134337022 + AluJo SINE Alu 1 302 0 575 262 120 43 chr10 5980885 5980955 -134335810 - MER112 DNA MER1_type -9 251 188 2008 125 31 0 chr10 5980955 5981244 -134335521 - AluSx SINE Alu -14 298 1 575 262 120 43 chr10 5981244 5981406 -134335359 - MER112 DNA MER1_type -72 188 1 1500 154 85 24 chr10 5981632 5981925 -134334840 + AluJo SINE Alu 1 311 -1 503 271 8 0 chr10 5982028 5982150 -134334615 - MER58B DNA MER1_type -3 338 216 1844 153 11 3 chr10 5982941 5983223 -134333542 - AluSx SINE Alu -28 284 1 829 150 8 0 chr10 5984917 5985050 -134331715 - AluJb SINE Alu -177 135 2 2097 119 3 0 chr10 5985096 5985403 -134331362 - AluSx SINE Alu 0 312 1 230 229 193 0 chr10 5985596 5985679 -134331086 + MIR SINE MIR 78 176 -86 1836 104 93 11 chr10 5985835 5986114 -134330651 - AluSc SINE Alu -7 302 1 1772 158 14 10 chr10 5986231 5986528 -134330237 - AluJb SINE Alu -12 300 3 303 241 76 0 chr10 5986541 5986620 -134330145 - L2 LINE L2 0 3313 3229 23 33 0 0 chr10 5986629 5986659 -134330106 + AT_rich Low_complexity Low_complexity 1 30 0 370 168 118 42 chr10 5986774 5986893 -134329872 - MER106A DNA MER1_type -1 235 108 407 287 10 0 chr10 5987078 5987179 -134329586 - L2 LINE L2 -954 2360 2259 283 313 47 7 chr10 5987187 5987337 -134329428 - L2 LINE L2 -1261 2053 1898 1562 182 0 47 chr10 5988689 5988985 -134327780 - AluJo SINE Alu -30 282 1 2413 76 26 0 chr10 5989049 5989352 -134327413 - AluY SINE Alu 0 311 1 1627 134 35 29 chr10 5989352 5989712 -134327053 + Tigger7 DNA MER2_type 180 2573 -14 27 0 0 0 chr10 5989721 5989748 -134327017 + AT_rich Low_complexity Low_complexity 1 27 0 347 138 11 0 chr10 5989773 5989860 -134326905 + (TA)n Simple_repeat Simple_repeat 2 89 0 26 64 0 0 chr10 5989878 5989925 -134326840 + AT_rich Low_complexity Low_complexity 1 47 0 2508 58 0 16 chr10 5991115 5991426 -134325339 + AluY SINE Alu 2 307 -4 783 157 3 13 chr10 5991564 5991714 -134325051 + L1P3 LINE L1 5668 5805 -349 1529 159 34 102 chr10 5991715 5991983 -134324782 + MER7A DNA MER2_type 21 259 -2779 1992 130 0 0 chr10 5991983 5992259 -134324506 + AluSc SINE Alu 1 276 -33 1529 159 34 102 chr10 5992259 5992342 -134324423 + MER7A DNA MER2_type 259 346 0 1559 154 113 18 chr10 5992342 5992679 -134324086 + L1MB8 LINE L1 5800 6168 -10 21 0 0 0 chr10 5992681 5992702 -134324063 + AT_rich Low_complexity Low_complexity 1 21 0 416 235 114 8 chr10 5993129 5993261 -134323504 - MIR SINE MIR -12 250 105 855 130 0 71 chr10 5993854 5994008 -134322757 - FLAM_C SINE Alu 0 143 1 1594 212 0 0 chr10 5998922 5999233 -134317532 + AluJb SINE Alu 1 311 -1 620 152 18 30 chr10 5999233 5999398 -134317367 + GA-rich Low_complexity Low_complexity 1 163 0 282 259 12 25 chr10 6000046 6000127 -134316638 + MLT1L LTR MaLR 7 86 -529 441 0 0 0 chr10 6000148 6000197 -134316568 + (TG)n Simple_repeat Simple_repeat 1 49 0 553 235 29 7 chr10 6000264 6000400 -134316365 + MLT1L LTR MaLR 129 267 -348 376 232 173 36 chr10 6000467 6000642 -134316123 + MLT1L LTR MaLR 296 611 -4 2063 132 0 3 chr10 6000897 6001192 -134315573 - AluSx SINE Alu -18 294 1 275 277 131 58 chr10 6001210 6001470 -134315295 - HAL1 LINE L1 -377 2130 1852 2787 195 133 36 chr10 6001518 6002915 -134313850 + L1ME2 LINE L1 4567 6155 -9 741 346 97 67 chr10 6003099 6003670 -134313095 + L1M4 LINE L1 2933 3486 -2660 2025 120 0 10 chr10 6003670 6003969 -134312796 - AluSx SINE Alu -11 301 6 741 346 97 67 chr10 6003969 6004228 -134312537 + L1M4 LINE L1 3486 3736 -2410 2566 30 10 0 chr10 6004228 6004526 -134312239 + AluY SINE Alu 1 301 -10 741 346 97 67 chr10 6004526 6004870 -134311895 + L1M4 LINE L1 3736 4143 -2003 409 248 223 45 chr10 6004892 6005251 -134311514 - HAL1b LINE L1 -702 646 224 234 0 0 0 chr10 6005368 6005394 -134311371 + (A)n Simple_repeat Simple_repeat 1 26 0 9703 149 36 24 chr10 6005404 6007185 -134309580 + L1MA4 LINE L1 3472 5321 -979 234 62 0 0 chr10 6007185 6007217 -134309548 + (CAAG)n Simple_repeat Simple_repeat 3 34 0 9703 149 36 24 chr10 6007217 6008207 -134308558 + L1MA4 LINE L1 5321 6298 -2 3516 174 20 36 chr10 6008501 6009250 -134307515 - L1MB8 LINE L1 0 6178 5442 22 35 0 0 chr10 6009250 6009279 -134307486 + AT_rich Low_complexity Low_complexity 1 29 0 840 224 97 0 chr10 6009310 6009506 -134307259 - MER58A DNA MER1_type -4 220 6 591 270 70 62 chr10 6009603 6009956 -134306809 - MLT1H LTR MaLR -4 545 72 601 136 9 9 chr10 6010002 6010112 -134306653 + L1MB7 LINE L1 6058 6167 -17 1776 278 149 47 chr10 6010904 6011375 -134305390 - HAL1 LINE L1 -1139 1368 947 1842 159 10 3 chr10 6011375 6011671 -134305094 + AluJo SINE Alu 1 298 -14 1776 278 149 47 chr10 6011671 6012396 -134304369 - HAL1 LINE L1 -1560 947 49 375 276 36 66 chr10 6012688 6012884 -134303881 + L2 LINE L2 3124 3313 0 480 297 62 15 chr10 6012901 6013174 -134303591 + L1 LINE L1 3587 3872 -2274 535 234 131 11 chr10 6013504 6013679 -134303086 + L2 LINE L2 3118 3313 0 441 354 103 37 chr10 6013691 6014213 -134302552 + L2 LINE L2 2713 3263 -9 21 0 0 0 chr10 6015235 6015256 -134301509 + GC_rich Low_complexity Low_complexity 1 21 0 1634 145 104 0 chr10 6015865 6016134 -134300631 - AluSx SINE Alu -15 297 1 2313 87 3 3 chr10 6016821 6017119 -134299646 - AluSc SINE Alu -11 298 1 376 276 99 29 chr10 6017777 6018020 -134298745 + L1M4 LINE L1 3135 3394 -2752 23 54 0 0 chr10 6018273 6018310 -134298455 + AT_rich Low_complexity Low_complexity 1 37 0 591 244 119 54 chr10 6018354 6018415 -134298350 + L1MC/D LINE L1 1331 1387 -4869 2364 81 0 0 chr10 6018415 6018710 -134298055 - AluSg SINE Alu -15 295 1 591 244 119 54 chr10 6018710 6019000 -134297765 + L1MC/D LINE L1 1387 1705 -4551 1602 180 14 0 chr10 6019027 6019305 -134297460 - AluJo SINE Alu -30 282 1 2372 166 127 50 chr10 6019306 6019516 -134297249 + Charlie1 DNA MER1_type 2049 2241 -520 1454 156 20 60 chr10 6019516 6019817 -134296948 + AluJo SINE Alu 24 312 0 2372 166 127 50 chr10 6019817 6020208 -134296557 + Charlie1 DNA MER1_type 2241 2708 -53 1900 130 7 0 chr10 6020208 6020492 -134296273 - AluSx SINE Alu -26 286 1 2372 166 127 50 chr10 6020492 6020550 -134296215 + Charlie1 DNA MER1_type 2708 2760 -1 340 231 134 8 chr10 6020551 6020685 -134296080 + L1ME3A LINE L1 5825 5975 -195 407 242 173 60 chr10 6020938 6021186 -134295579 + L1MC/D LINE L1 4554 4829 -1386 * 518 297 144 57 chr10 6021154 6021625 -134295140 + L1MC/D LINE L1 5351 5862 -2015 4014 118 92 18 chr10 6023757 6024488 -134292277 - Tigger3(Golem) DNA MER2_type -2 3027 2243 1258 182 19 0 chr10 6024521 6024730 -134292035 - Tigger3(Golem) DNA MER2_type -2816 213 1 562 316 81 42 chr10 6024801 6025231 -134291534 - L2 LINE L2 0 3313 2867 1064 233 124 78 chr10 6025233 6025770 -134290995 - L1ME3A LINE L1 -15 6155 5593 427 209 234 13 chr10 6026174 6026332 -134290433 - L1ME3A LINE L1 -551 5611 5419 2004 109 0 39 chr10 6026379 6026690 -134290075 - AluSq SINE Alu -14 299 1 3256 213 81 48 chr10 6026693 6027890 -134288875 - L1ME3A LINE L1 -1468 4678 3442 814 234 21 0 chr10 6027894 6028184 -134288581 + L1M4b LINE L1 1140 1509 -5350 190 167 119 24 chr10 6028253 6028295 -134288470 + MIR3 SINE MIR 109 154 -54 368 222 123 70 chr10 6028369 6028540 -134288225 - HAL1 LINE L1 -37 2470 2291 799 118 0 9 chr10 6028562 6028672 -134288093 - FLAM_C SINE Alu -25 118 10 243 278 119 16 chr10 6028679 6028805 -134287960 - HAL1 LINE L1 -200 2307 2169 192 97 0 0 chr10 6028928 6028959 -134287806 + (CA)n Simple_repeat Simple_repeat 1 31 0 1003 265 92 12 chr10 6029222 6029547 -134287218 + LTR16B LTR ERVL 114 464 0 320 313 23 16 chr10 6029553 6029681 -134287084 + HERV16 LTR ERVL 6 134 -4862 445 329 50 23 chr10 6030470 6030771 -134285994 + HERV16 LTR ERVL 4688 4996 0 1119 303 59 11 chr10 6030771 6031214 -134285551 + LTR16B LTR ERVL 1 464 0 207 288 50 0 chr10 6031256 6031336 -134285429 + MER5A DNA MER1_type 8 91 -98 1629 145 0 0 chr10 6031338 6031587 -134285178 - AluSx SINE Alu -14 298 50 819 167 18 18 chr10 6031796 6031964 -134284801 + L1 LINE L1 4549 4716 -1430 1657 144 0 62 chr10 6031966 6032271 -134284494 + AluJb SINE Alu 14 299 -13 1980 113 50 0 chr10 6032273 6032556 -134284209 + AluSc SINE Alu 1 297 -12 661 156 16 0 chr10 6032556 6032684 -134284081 + L1MA5 LINE L1 6171 6300 0 898 58 0 17 chr10 6032843 6032987 -134283778 - AluY SINE Alu 0 311 171 925 280 8 23 chr10 6033037 6033294 -134283471 + MIR SINE MIR 4 256 -6 620 186 114 41 chr10 6033315 6033543 -134283222 + L1MC5 LINE L1 7259 7415 -393 896 173 11 32 chr10 6033571 6033623 -134283142 + FAM SINE Alu 1 4294967213 -268 1946 95 206 46 chr10 6033623 6033944 -134282821 + MSTA LTR MaLR 1 390 -38 2291 63 0 35 chr10 6033944 6034259 -134282506 - AluY SINE Alu -7 304 1 1946 95 206 46 chr10 6034259 6034306 -134282459 + MSTA LTR MaLR 390 428 0 896 173 11 32 chr10 6034306 6034438 -134282327 + FAM SINE Alu -84 49 0 571 219 26 0 chr10 6034473 6034624 -134282141 + L1M4 LINE L1 2231 2385 -3761 26 93 0 0 chr10 6034629 6034704 -134282061 + AT_rich Low_complexity Low_complexity 1 75 0 1969 248 38 16 chr10 6034721 6035351 -134281414 + L1M4 LINE L1 2371 3014 -3132 295 287 59 20 chr10 6035368 6035469 -134281296 - MLT2F LTR ERVL -284 379 275 4027 267 109 55 chr10 6035513 6036163 -134280602 - ERVL LTR ERVL -2715 3049 2435 2186 83 0 0 chr10 6036163 6036452 -134280313 - AluSc SINE Alu 0 309 21 4027 267 109 55 chr10 6036452 6037485 -134279280 - ERVL LTR ERVL -3329 2435 1276 933 309 28 32 chr10 6037586 6038279 -134278486 - ERVL LTR ERVL -4646 1118 352 639 154 106 24 chr10 6038410 6038533 -134278232 - FLAM_A SINE Alu 0 133 1 1236 149 0 14 chr10 6039121 6039335 -134277430 + AluSg/x SINE Alu 94 304 -8 183 222 0 0 chr10 6039870 6039915 -134276850 + (CATA)n Simple_repeat Simple_repeat 4 48 0 25 0 0 0 chr10 6040489 6040514 -134276251 + AT_rich Low_complexity Low_complexity 1 25 0 240 195 35 46 chr10 6041312 6041399 -134275366 + (CCCGG)n Simple_repeat Simple_repeat 5 90 0 2005 136 0 0 chr10 6041686 6041987 -134274778 - AluSx SINE Alu -10 302 2 1993 227 203 14 chr10 6041998 6042239 -134274526 - L1MD3 LINE L1 0 8039 7845 1928 146 0 3 chr10 6042239 6042541 -134274224 - AluJb SINE Alu -11 301 1 1993 227 203 14 chr10 6042541 6043106 -134273659 - L1MD3 LINE L1 -194 7845 7077 2174 107 3 7 chr10 6045071 6045379 -134271386 + AluSc SINE Alu 1 307 -2 2195 77 0 42 chr10 6045934 6046247 -134270518 - AluSq SINE Alu -13 300 1 23 0 0 0 chr10 6046304 6046327 -134270438 + AT_rich Low_complexity Low_complexity 1 23 0 186 254 16 48 chr10 6046504 6046567 -134270198 - L2 LINE L2 -1065 2249 2189 198 326 45 45 chr10 6047106 6047195 -134269570 - L2 LINE L2 -661 2653 2565 237 167 0 0 chr10 6047767 6047821 -134268944 + (TA)n Simple_repeat Simple_repeat 2 55 0 1488 156 0 0 chr10 6047843 6048080 -134268685 - AluSx SINE Alu -75 237 1 336 185 62 0 chr10 6048296 6048377 -134268388 + L1M4 LINE L1 5606 5691 -493 2106 122 0 0 chr10 6049615 6049918 -134266847 + AluSq SINE Alu 7 309 -4 1074 126 0 0 chr10 6049918 6050106 -134266659 + AluSg/x SINE Alu 132 319 0 454 271 99 48 chr10 6050109 6050401 -134266364 - HAL1 LINE L1 -218 2289 1983 213 277 0 15 chr10 6051522 6051587 -134265178 + CT-rich Low_complexity Low_complexity 4 67 0 235 274 59 39 chr10 6051976 6052078 -134264687 - HAL1 LINE L1 -2369 138 35 324 158 0 0 chr10 6052177 6052234 -134264531 + C-rich Low_complexity Low_complexity 5 61 0 1971 96 3 41 chr10 6052238 6052529 -134264236 - AluSx SINE Alu -32 280 1 1978 116 10 13 chr10 6052968 6053279 -134263486 + AluJb SINE Alu 1 310 -2 245 211 0 0 chr10 6053751 6053803 -134262962 + MER63 DNA MER1_type 696 747 -89 4327 148 81 44 chr10 6056102 6056394 -134260371 - L1MB2 LINE L1 -2 6169 5889 1496 134 181 0 chr10 6056394 6056648 -134260117 - AluSg SINE Alu 0 300 1 4327 148 81 44 chr10 6056648 6056660 -134260105 - L1MB2 LINE L1 -282 5889 5879 1933 113 3 36 chr10 6056660 6056969 -134259796 - AluSx SINE Alu -13 299 1 4327 148 81 44 chr10 6056969 6057636 -134259129 - L1MB2 LINE L1 -292 5879 5157 1295 222 68 20 chr10 6057800 6058151 -134258614 - MER87 LTR ERV1 0 541 174 2211 77 0 3 chr10 6058280 6058567 -134258198 - AluSg SINE Alu -14 296 11 217 234 11 117 chr10 6058609 6058703 -134258062 - L2 LINE L2 0 3272 3189 571 276 81 57 chr10 6059357 6059603 -134257162 - MIR SINE MIR -3 259 8 2067 109 0 16 chr10 6059716 6060020 -134256745 - AluSq SINE Alu -14 299 1 192 77 0 0 chr10 6060674 6060700 -134256065 + (A)n Simple_repeat Simple_repeat 1 26 0 1166 210 12 12 chr10 6060702 6060853 -134255912 + L1 LINE L1 4015 4169 -1977 2159 96 0 0 chr10 6060853 6061177 -134255588 + AluSx SINE Alu 1 324 0 1166 210 12 12 chr10 6061177 6061267 -134255498 + L1 LINE L1 4168 4257 -1889 284 244 167 40 chr10 6062324 6062513 -134254252 + MER63 DNA MER1_type 1 1688 0 324 0 0 0 chr10 6062772 6062808 -134253957 + (TG)n Simple_repeat Simple_repeat 1 36 0 2046 134 3 0 chr10 6062912 6063217 -134253548 - AluJb SINE Alu -6 306 1 2008 112 7 17 chr10 6065110 6065406 -134251359 + AluSx SINE Alu 1 293 -19 325 335 0 0 chr10 6066345 6066524 -134250241 + (CGTG)n Simple_repeat Simple_repeat 1 179 0 338 335 0 0 chr10 6066696 6066875 -134249890 + (CGTG)n Simple_repeat Simple_repeat 1 179 0 302 328 0 0 chr10 6066801 6066972 -134249793 + (TG)n Simple_repeat Simple_repeat 2 172 0 * 192 311 283 17 chr10 6067121 6067301 -134249464 + MIR SINE MIR 35 262 0 743 176 8 0 chr10 6067681 6067812 -134248953 + FLAM_C SINE Alu 2 133 -10 354 278 51 77 chr10 6068205 6068478 -134248287 - MLT1K LTR MaLR 0 588 323 68 24 0 0 chr10 6069617 6069699 -134247066 + AT_rich Low_complexity Low_complexity 1 82 0 237 109 47 31 chr10 6069937 6070001 -134246764 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 2252 122 0 0 chr10 6070100 6070403 -134246362 - AluSx SINE Alu -9 303 1 1701 159 7 11 chr10 6070449 6070726 -134246039 - AluJb SINE Alu -36 276 1 1724 86 9 0 chr10 6072063 6072285 -134244480 + AluSg/x SINE Alu 68 291 -19 27 0 0 0 chr10 6072341 6072368 -134244397 + AT_rich Low_complexity Low_complexity 1 27 0 2151 97 0 72 chr10 6073542 6073862 -134242903 + AluSx SINE Alu 6 302 -10 445 103 0 0 chr10 6075493 6075551 -134241214 + AluSq/x SINE Alu 62 119 -194 2441 70 0 19 chr10 6076510 6076822 -134239943 - AluY SINE Alu -5 306 1 1916 163 7 0 chr10 6076869 6077169 -134239596 + AluSx SINE Alu 1 302 -10 471 283 60 57 chr10 6077356 6077443 -134239322 + L1ME3A LINE L1 5209 5294 -876 749 172 31 0 chr10 6077443 6077571 -134239194 + FLAM_C SINE Alu 1 132 -1 471 283 60 57 chr10 6077571 6078152 -134238613 + L1ME3A LINE L1 5294 5891 -279 1008 98 0 0 chr10 6078341 6078474 -134238291 + FLAM_C SINE Alu 1 133 0 1445 177 58 50 chr10 6080177 6080332 -134236433 + MLT1A1 LTR MaLR 1 153 -212 2093 130 3 0 chr10 6080332 6080625 -134236140 + AluSq SINE Alu 1 294 -19 1445 177 58 50 chr10 6080625 6080791 -134235974 + MLT1A1 LTR MaLR 153 328 -37 1465 182 91 0 chr10 6080791 6081066 -134235699 - AluJo SINE Alu -12 300 1 1445 177 58 50 chr10 6081066 6081105 -134235660 + MLT1A1 LTR MaLR 328 365 0 358 177 54 11 chr10 6083024 6083126 -134233639 + (TCTA)n Simple_repeat Simple_repeat 1 97 -480 1844 170 0 0 chr10 6083126 6083414 -134233351 - 7SLRNA srpRNA srpRNA -12 308 21 358 177 54 11 chr10 6083414 6083578 -134233187 + (TCTA)n Simple_repeat Simple_repeat 97 577 0 1682 173 46 41 chr10 6084283 6084671 -134232094 - MLT1B LTR MaLR 0 390 1 297 0 0 0 chr10 6085094 6085127 -134231638 + (T)n Simple_repeat Simple_repeat 1 33 0 774 256 50 6 chr10 6085197 6085377 -134231388 - MER58A DNA MER1_type -33 191 4 355 240 0 13 chr10 6085433 6085508 -134231257 - MLT1J LTR MaLR -202 309 236 1428 244 35 32 chr10 6086719 6087092 -134229673 + MLT1B LTR MaLR 1 374 -16 1726 187 3 7 chr10 6087179 6087478 -134229287 - AluJo SINE Alu -13 299 2 2588 50 0 3 chr10 6087574 6087875 -134228890 + AluY SINE Alu 1 300 -11 199 311 33 16 chr10 6088178 6088300 -134228465 + L2 LINE L2 3143 3266 -6 989 182 56 33 chr10 6088800 6088837 -134227928 + MER58A DNA MER1_type 1 36 -2384 2184 113 0 0 chr10 6088837 6089177 -134227588 - AluSq SINE Alu 0 342 3 989 182 56 33 chr10 6089177 6089352 -134227413 + MER58A DNA MER1_type 36 219 -5 2297 116 0 0 chr10 6089426 6089719 -134227046 - AluSx SINE Alu -19 293 1 3103 277 71 12 chr10 6089783 6091070 -134225695 + L1MEc LINE L1 1122 2483 -3913 450 250 127 26 chr10 6091070 6091157 -134225608 + L1M4 LINE L1 4204 4281 -1865 717 45 0 0 chr10 6091157 6091246 -134225519 + (TA)n Simple_repeat Simple_repeat 1 89 0 450 250 127 26 chr10 6091246 6091426 -134225339 + L1M4 LINE L1 4281 4498 -1648 6367 52 3 1 chr10 6091543 6092327 -134224438 + L1PA3 LINE L1 5371 6155 0 180 77 0 0 chr10 6092337 6092363 -134224402 + (A)n Simple_repeat Simple_repeat 1 26 0 1109 166 4 4 chr10 6092363 6093723 -134223042 - ALR/Alpha Satellite centromeric 0 1360 1 2195 113 0 0 chr10 6093907 6094217 -134222548 - AluSx SINE Alu 0 310 1 22 35 0 0 chr10 6094320 6094349 -134222416 + AT_rich Low_complexity Low_complexity 1 29 0 721 163 8 16 chr10 6094607 6094730 -134222035 - FLAM_C SINE Alu -10 123 2 773 266 55 44 chr10 6094928 6095203 -134221562 + MLT1J LTR MaLR 200 477 -34 858 126 0 15 chr10 6095227 6095362 -134221403 - FLAM_C SINE Alu 0 133 1 859 209 6 17 chr10 6096082 6096254 -134220511 - MER45A DNA AcHobo -8 170 1 516 219 116 0 chr10 6096262 6096585 -134220180 + L1MCc LINE L1 1198 1571 -4851 373 167 154 0 chr10 6096589 6096667 -134220098 + MLT1B LTR MaLR 1 90 -300 3613 226 46 82 chr10 6096683 6097905 -134218860 + L1MCc LINE L1 1732 2808 -4133 2145 151 0 0 chr10 6097905 6098217 -134218548 + AluSx SINE Alu 1 312 0 3613 226 46 82 chr10 6098217 6099411 -134217354 + L1MCc LINE L1 2808 4043 -2898 607 188 257 10 chr10 6099582 6099732 -134217033 - MER69 DNA AcHobo -92 2434 2322 1793 160 0 53 chr10 6099732 6100052 -134216713 - AluSx SINE Alu 0 304 1 607 188 257 10 chr10 6100052 6100102 -134216663 - MER69 DNA AcHobo -204 2322 2183 453 258 113 32 chr10 6100649 6100835 -134215930 + LTR33A LTR ERVL 297 497 -26 2061 138 10 0 chr10 6100841 6101132 -134215633 - AluSx SINE Alu -18 294 1 273 216 69 78 chr10 6102246 6102348 -134214417 + HsTC2 DNA Tc2 1793 1893 -5 1011 235 81 59 chr10 6102396 6102721 -134214044 - L1ME2 LINE L1 -63 6101 5764 1987 152 0 26 chr10 6102721 6103023 -134213742 + AluSx SINE Alu 1 294 -18 1011 235 81 59 chr10 6103023 6103105 -134213660 - L1ME2 LINE L1 -400 5764 5685 291 93 0 0 chr10 6103105 6103148 -134213617 + (TA)n Simple_repeat Simple_repeat 1 43 0 2139 125 20 0 chr10 6103329 6103633 -134213132 - AluSx SINE Alu -2 310 1 412 179 12 0 chr10 6103674 6103758 -134213007 + L1PA16 LINE L1 6080 6164 -2 414 0 0 0 chr10 6105480 6105526 -134211239 + (TG)n Simple_repeat Simple_repeat 2 47 0 225 0 0 0 chr10 6105577 6105602 -134211163 + (TG)n Simple_repeat Simple_repeat 2 26 0 297 0 0 0 chr10 6105664 6105697 -134211068 + (TG)n Simple_repeat Simple_repeat 2 34 0 384 22 0 0 chr10 6105746 6105791 -134210974 + (TG)n Simple_repeat Simple_repeat 2 46 0 315 0 0 0 chr10 6105853 6105888 -134210877 + (TG)n Simple_repeat Simple_repeat 2 36 0 429 20 0 0 chr10 6105937 6105987 -134210778 + (TG)n Simple_repeat Simple_repeat 1 50 0 227 190 52 0 chr10 6106121 6106179 -134210586 - LTR33A LTR ERVL -4 519 459 421 232 62 9 chr10 6106185 6106297 -134210468 - L1MA10 LINE L1 -7 6327 6210 379 225 15 36 chr10 6106295 6106405 -134210360 - L1ME1 LINE L1 -148 6016 5894 * 1069 202 50 60 chr10 6106410 6106464 -134210301 - MLT1C LTR MaLR -183 284 231 1726 177 3 10 chr10 6106464 6106763 -134210002 + AluSx SINE Alu 1 297 -15 1069 202 50 60 chr10 6106763 6106990 -134209775 - MLT1C LTR MaLR -236 231 6 780 228 95 30 chr10 6107007 6107200 -134209565 - L1MCa LINE L1 -4678 1929 1713 2151 135 3 0 chr10 6107200 6107497 -134209268 - AluSx SINE Alu -14 298 1 780 228 95 30 chr10 6107497 6107566 -134209199 - L1MCa LINE L1 -4894 1713 1650 261 301 126 79 chr10 6107568 6107910 -134208855 + MLT1K LTR MaLR 134 491 -97 1897 171 14 26 chr10 6107953 6108181 -134208584 - MER7A DNA MER2_type -2692 346 123 1984 133 7 0 chr10 6108181 6108484 -134208281 - AluSx SINE Alu 0 305 1 1897 171 14 26 chr10 6108484 6108605 -134208160 - MER7A DNA MER2_type -2915 123 2 324 61 0 61 chr10 6109175 6109224 -134207541 - MSTB1 LTR MaLR 0 457 412 1112 73 11 17 chr10 6109224 6109403 -134207362 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 219 69 0 0 chr10 6109423 6109452 -134207313 + (TC)n Simple_repeat Simple_repeat 1 29 0 1185 82 19 0 chr10 6109452 6109610 -134207155 - AluSc SINE Alu -15 294 134 2000 175 34 11 chr10 6109611 6109984 -134206781 - MSTB1 LTR MaLR -38 394 10 4321 85 2 0 chr10 6109984 6110537 -134206228 + MER41A LTR ERV1 1 554 0 937 281 82 24 chr10 6110641 6110894 -134205871 - MLT1J LTR MaLR -70 441 153 5234 120 24 31 chr10 6110894 6111772 -134204993 + MER4D LTR ERV1 1 872 0 937 281 82 24 chr10 6111772 6111935 -134204830 - MLT1J LTR MaLR -358 153 1 3263 191 20 30 chr10 6111949 6112648 -134204117 - L1MCa LINE L1 -4972 935 466 1319 162 199 39 chr10 6112648 6113036 -134203729 + LTR7 LTR ERV1 1 450 0 3263 191 20 30 chr10 6113036 6113416 -134203349 - L1MCa LINE L1 -5441 466 84 2642 177 107 35 chr10 6113820 6114182 -134202583 - L1MB5 LINE L1 -1 6163 5829 2101 112 3 32 chr10 6114182 6114495 -134202270 - AluSx SINE Alu -8 304 1 2642 177 107 35 chr10 6114495 6114858 -134201907 - L1MB5 LINE L1 -335 5829 5366 350 175 6 129 chr10 6114884 6114910 -134201855 - Charlie1 DNA MER1_type -39 2722 2694 2310 106 6 0 chr10 6114910 6115221 -134201544 + AluSq SINE Alu 1 313 0 350 175 6 129 chr10 6115221 6115365 -134201400 - Charlie1 DNA MER1_type -67 2694 2573 * 654 233 15 0 chr10 6115363 6115496 -134201269 - Charlie1 DNA MER1_type -2570 191 57 671 225 40 12 chr10 6115951 6116124 -134200641 + MER5A DNA MER1_type 1 178 -11 1883 154 7 0 chr10 6116163 6116455 -134200310 - AluJo SINE Alu -18 294 1 213 196 43 0 chr10 6116494 6116540 -134200225 + CT-rich Low_complexity Low_complexity 3 50 0 1245 103 0 0 chr10 6117587 6117742 -134199023 - AluSg SINE Alu -155 155 1 1049 140 45 30 chr10 6117842 6118042 -134198723 + MER3 DNA MER1_type 1 203 -6 1728 197 64 33 chr10 6118138 6118447 -134198318 + MER63B DNA MER1_type 1 328 -734 1578 185 49 3 chr10 6118447 6118733 -134198032 - AluJo SINE Alu -13 299 1 1728 197 64 33 chr10 6118733 6118844 -134197921 + MER63B DNA MER1_type 328 434 -2 2203 124 0 0 chr10 6119695 6119994 -134196771 - AluSx SINE Alu 0 312 14 775 201 13 0 chr10 6120033 6120192 -134196573 + MER5A DNA MER1_type 1 161 -28 237 211 0 7 chr10 6120192 6120203 -134196562 + MER5A DNA MER1_type 137 147 -42 840 127 0 8 chr10 6120203 6120337 -134196428 - L1MA5A LINE L1 -5 6292 6160 237 211 0 7 chr10 6120337 6120380 -134196385 + MER5A DNA MER1_type 147 189 0 204 228 0 70 chr10 6120391 6120448 -134196317 - MER5B DNA MER1_type -4 174 122 1130 173 138 27 chr10 6120455 6120658 -134196107 + L1MB5 LINE L1 5886 6126 -48 1735 158 69 91 chr10 6120658 6121063 -134195702 + MSTD LTR MaLR 1 396 0 1130 173 138 27 chr10 6121063 6121119 -134195646 + L1MB5 LINE L1 6126 6174 0 186 167 28 0 chr10 6121123 6121159 -134195606 - MER5B DNA MER1_type -54 124 88 2142 90 3 3 chr10 6121186 6121476 -134195289 - AluSq SINE Alu -12 301 12 2088 115 0 7 chr10 6122187 6122491 -134194274 - AluSx SINE Alu -9 303 2 798 172 0 0 chr10 6123446 6123987 -134192778 + (CCAA)n Simple_repeat Simple_repeat 1 541 0 2246 76 14 0 chr10 6125157 6125447 -134191318 - AluSq SINE Alu -19 294 1 210 143 0 0 chr10 6125543 6125578 -134191187 + (TG)n Simple_repeat Simple_repeat 1 35 0 234 242 12 121 chr10 6125891 6126047 -134190718 - MIR3 SINE MIR -28 180 40 183 302 16 0 chr10 6126422 6126485 -134190280 - L2 LINE L2 0 3313 3250 287 292 144 26 chr10 6127686 6127844 -134188921 + MIR SINE MIR 43 212 -50 1975 127 3 19 chr10 6127935 6128250 -134188515 - AluSx SINE Alu -2 310 1 188 289 103 21 chr10 6129035 6129132 -134187633 - L2 LINE L2 0 3313 3209 180 188 0 59 chr10 6129193 6129294 -134187471 + (TATG)n Simple_repeat Simple_repeat 4 98 0 1015 146 0 12 chr10 6129565 6129729 -134187036 + AluJb SINE Alu 1 162 -150 1581 146 8 0 chr10 6129729 6129982 -134186783 + AluSx SINE Alu 44 298 -14 2099 114 0 7 chr10 6129988 6130287 -134186478 + AluSx SINE Alu 1 297 -15 2014 114 0 14 chr10 6131654 6131951 -134184814 + AluSx SINE Alu 1 293 -19 215 339 148 17 chr10 6132102 6132314 -134184451 + MIR3 SINE MIR 15 256 -6 571 265 38 25 chr10 6132549 6132787 -134183978 + L1ME2 LINE L1 34 274 -6122 354 243 46 99 chr10 6133097 6133334 -134183431 + L1ME2 LINE L1 660 879 -5517 1729 129 42 17 chr10 6133334 6133621 -134183144 + AluSx SINE Alu 5 298 -14 354 243 46 99 chr10 6133621 6133687 -134183078 + L1ME2 LINE L1 879 947 -5449 1426 233 88 67 chr10 6133865 6134342 -134182423 + L1ME2 LINE L1 4794 5296 -937 2350 77 0 3 chr10 6134342 6134653 -134182112 + AluY SINE Alu 1 310 -1 1426 233 88 67 chr10 6134653 6135022 -134181743 + L1ME2 LINE L1 5296 5656 -577 662 143 0 4 chr10 6135026 6135250 -134181515 + AluSx SINE Alu 1 308 -2 1037 254 38 38 chr10 6135275 6135745 -134181020 + L1ME2 LINE L1 5654 6091 -142 361 220 13 0 chr10 6135754 6135842 -134180923 + L1ME2 LINE L1 6144 6223 -10 209 266 101 13 chr10 6138163 6138242 -134178523 - MIR SINE MIR -103 105 20 246 322 44 0 chr10 6138850 6138940 -134177825 - MER5A DNA MER1_type -87 102 9 591 232 137 42 chr10 6139961 6140129 -134176636 - MIR3 SINE MIR -5 203 20 554 272 125 0 chr10 6140325 6140509 -134176256 - MIR SINE MIR 0 262 56 465 263 90 75 chr10 6140911 6141497 -134175268 + L1M4 LINE L1 2128 2722 -3424 462 338 61 19 chr10 6142702 6142915 -134173850 + L1M4 LINE L1 4166 4387 -1759 2288 70 10 3 chr10 6143045 6143346 -134173419 - AluY SINE Alu -8 303 1 420 269 82 68 chr10 6143369 6143608 -134173157 + L1ME3A LINE L1 2371 2614 -3926 225 264 81 34 chr10 6143639 6143787 -134172978 + L1ME3A LINE L1 2628 2782 -3758 428 309 77 47 chr10 6144060 6144555 -134172210 + L1ME3A LINE L1 4139 4648 -1892 * 868 277 79 38 chr10 6144551 6145235 -134171530 + L1ME3A LINE L1 5632 6337 -227 2042 132 3 0 chr10 6145358 6145668 -134171097 - AluSx SINE Alu 0 312 2 28 0 0 0 chr10 6145794 6145822 -134170943 + AT_rich Low_complexity Low_complexity 1 28 0 2422 175 24 37 chr10 6146107 6146599 -134170166 - MER66B LTR ERV1 0 486 1 367 259 54 9 chr10 6148744 6148856 -134167909 + Charlie8 DNA MER1_type 1090 1206 -1211 189 292 62 0 chr10 6148952 6149000 -134167765 - MIR3 SINE MIR -1 207 157 34 24 0 0 chr10 6149583 6149624 -134167141 + AT_rich Low_complexity Low_complexity 1 41 0 268 173 27 55 chr10 6149693 6149803 -134166962 + (TATAA)n Simple_repeat Simple_repeat 5 111 0 618 263 26 7 chr10 6149831 6149983 -134166782 - MIR SINE MIR -94 168 14 354 280 92 48 chr10 6150118 6150389 -134166376 - L2 LINE L2 -734 2580 2298 319 321 136 0 chr10 6150430 6150570 -134166195 - MIR SINE MIR -11 251 93 2667 149 22 65 chr10 6150911 6151447 -134165318 - MLT2B2 LTR ERVL 0 515 3 290 262 78 10 chr10 6152180 6152283 -134164482 + MIR SINE MIR 38 147 -115 1965 101 7 30 chr10 6152286 6152583 -134164182 + AluSx SINE Alu 1 290 -22 216 0 0 0 chr10 6153427 6153451 -134163314 + (TA)n Simple_repeat Simple_repeat 2 25 0 2199 84 7 3 chr10 6153451 6153750 -134163015 - AluSx SINE Alu -11 301 2 234 0 0 0 chr10 6153750 6153776 -134162989 + (TA)n Simple_repeat Simple_repeat 1 26 0 395 213 117 0 chr10 6154316 6154410 -134162355 + L2 LINE L2 3168 3272 0 372 330 92 42 chr10 6155100 6155339 -134161426 + MIR SINE MIR 2 252 -10 23 33 0 0 chr10 6155579 6155609 -134161156 + AT_rich Low_complexity Low_complexity 1 30 0 815 128 0 0 chr10 6155609 6155726 -134161039 - FLAM_C SINE Alu -15 118 2 826 163 0 15 chr10 6156794 6156929 -134159836 - FLAM_C SINE Alu 0 133 1 299 269 186 26 chr10 6157006 6157162 -134159603 + MER5A DNA MER1_type 9 189 0 354 349 34 34 chr10 6157229 6157404 -134159361 - MER5B DNA MER1_type -2 176 2 194 342 53 13 chr10 6157646 6157722 -134159043 + L2 LINE L2 3132 3210 -62 1635 164 10 7 chr10 6157904 6158197 -134158568 + AluSx SINE Alu 1 294 -18 299 244 61 0 chr10 6158917 6158999 -134157766 - MIR3 SINE MIR 0 208 122 2255 95 0 3 chr10 6159278 6159582 -134157183 + AluSx SINE Alu 1 303 -9 184 293 338 6 chr10 6160751 6160908 -134155857 + MIR SINE MIR 48 256 -6 239 327 243 22 chr10 6161109 6161381 -134155384 + L2 LINE L2 2878 3209 -63 753 146 8 0 chr10 6161660 6161783 -134154982 + L1PB1 LINE L1 5957 6080 -71 872 81 16 0 chr10 6161783 6161903 -134154862 + L1PB1 LINE L1 6023 6148 -3 2058 129 0 7 chr10 6161909 6162218 -134154547 + AluSg SINE Alu 1 307 -3 1600 154 35 3 chr10 6162541 6162826 -134153939 + AluJb SINE Alu 1 294 -18 225 208 21 0 chr10 6162867 6162915 -134153850 + (CATATA)n Simple_repeat Simple_repeat 2 50 0 189 0 0 0 chr10 6163841 6163862 -134152903 + (T)n Simple_repeat Simple_repeat 1 21 0 825 142 0 8 chr10 6164620 6164754 -134152011 + AluSq/x SINE Alu 1 133 -180 21 0 0 0 chr10 6164754 6164775 -134151990 + AT_rich Low_complexity Low_complexity 1 21 0 2065 107 0 3 chr10 6164775 6165064 -134151701 + AluSx SINE Alu 1 288 -24 26 64 0 0 chr10 6165276 6165323 -134151442 + AT_rich Low_complexity Low_complexity 1 47 0 1741 102 8 0 chr10 6165323 6165559 -134151206 - AluSx SINE Alu -59 253 16 4196 78 18 12 chr10 6166041 6166608 -134150157 - L1PA8A LINE L1 0 6131 5562 201 74 0 0 chr10 6166720 6166747 -134150018 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 1493 172 0 12 chr10 6166759 6167015 -134149750 - AluJb SINE Alu -58 254 2 207 0 0 0 chr10 6167321 6167344 -134149421 + (T)n Simple_repeat Simple_repeat 1 23 0 2105 115 0 0 chr10 6168535 6168830 -134147935 + AluSq SINE Alu 1 295 -18 1071 144 0 6 chr10 6169600 6169767 -134146998 + FRAM SINE Alu 1 166 0 2088 104 24 0 chr10 6171610 6171897 -134144868 - AluSx SINE Alu -18 294 1 295 393 13 13 chr10 6172322 6172546 -134144219 - MIR SINE MIR -3 259 36 238 83 0 42 chr10 6173021 6173069 -134143696 + (TCC)n Simple_repeat Simple_repeat 3 48 0 1730 161 7 13 chr10 6173666 6173970 -134142795 + AluJo SINE Alu 1 302 -10 3436 101 12 45 chr10 6174605 6174779 -134141986 - L1MA5A LINE L1 -1 6296 6118 2225 115 0 3 chr10 6174779 6175084 -134141681 - AluSx SINE Alu -3 309 6 3436 101 12 45 chr10 6175084 6175483 -134141282 - L1MA5A LINE L1 -179 6118 5742 1922 137 20 10 chr10 6175558 6175857 -134140908 - AluJb SINE Alu -10 302 1 219 189 0 0 chr10 6175928 6175965 -134140800 - MIR SINE MIR -7 255 219 * 503 267 127 46 chr10 6175933 6176682 -134140083 - L2 LINE L2 -18 3295 2400 186 242 0 16 chr10 6176784 6176846 -134139919 - L2 LINE L2 -1522 1792 1732 981 123 20 27 chr10 6176948 6177094 -134139671 - AluSq/x SINE Alu -167 145 1 455 267 87 20 chr10 6177097 6177247 -134139518 - HERV16 LTR ERVL -3144 1852 1693 * 460 331 138 34 chr10 6177243 6177518 -134139247 + HERV16 LTR ERVL 3612 3857 -1797 1785 145 48 3 chr10 6177518 6177807 -134138958 + AluSq SINE Alu 1 302 -11 460 331 138 34 chr10 6177807 6178059 -134138706 + HERV16 LTR ERVL 3857 4194 -1460 1030 116 0 7 chr10 6178215 6178361 -134138404 + AluSq/x SINE Alu 2 146 -167 535 141 0 0 chr10 6178361 6178439 -134138326 + AluS SINE Alu 223 300 -12 443 254 155 42 chr10 6179124 6179459 -134137306 + LTR16A LTR ERVL 61 433 -17 234 296 0 20 chr10 6179758 6179856 -134136909 + A-rich Low_complexity Low_complexity 2 97 0 1387 167 17 24 chr10 6180047 6180334 -134136431 - AluSx SINE Alu -27 285 1 358 164 41 82 chr10 6180543 6180689 -134136076 + (CACTC)n Simple_repeat Simple_repeat 4 143 0 2226 113 0 0 chr10 6181170 6181475 -134135290 + AluSx SINE Alu 1 305 0 668 298 121 46 chr10 6181566 6181845 -134134920 + HERV16 LTR ERVL 1957 2268 -2728 2240 115 3 0 chr10 6181845 6182150 -134134615 + AluSx SINE Alu 1 306 -6 668 298 121 46 chr10 6182150 6182216 -134134549 + HERV16 LTR ERVL 2268 2328 -2668 1267 265 7 0 chr10 6182227 6182514 -134134251 - MER58B DNA MER1_type -38 303 15 489 313 138 22 chr10 6182531 6182726 -134134039 + HERV16 LTR ERVL 2323 2494 -2502 2036 118 14 0 chr10 6182726 6183034 -134133731 - AluSp SINE Alu 0 312 1 489 313 138 22 chr10 6183034 6183353 -134133412 + HERV16 LTR ERVL 2494 2900 -2096 963 124 7 0 chr10 6183391 6183528 -134133237 - AluSg/x SINE Alu -17 293 156 458 240 71 19 chr10 6183532 6183686 -134133079 - HERV16 LTR ERVL -4682 314 153 272 339 26 0 chr10 6185004 6185119 -134131646 + MIR SINE MIR 133 250 -12 351 279 26 12 chr10 6185285 6185471 -134131294 + MIR SINE MIR 37 228 -34 1840 158 7 7 chr10 6185960 6186244 -134130521 + AluJb SINE Alu 3 286 -26 2223 121 7 0 chr10 6186484 6186790 -134129975 - AluSx SINE Alu -4 308 1 23 0 0 0 chr10 6186935 6186958 -134129807 + AT_rich Low_complexity Low_complexity 1 23 0 2148 114 0 0 chr10 6187143 6187424 -134129341 + AluSq SINE Alu 1 281 -32 947 97 14 0 chr10 6187424 6187568 -134129197 + (GAAA)n Simple_repeat Simple_repeat 1 146 0 2454 63 0 0 chr10 6187601 6187888 -134128877 + AluSq SINE Alu 18 304 -9 470 267 134 54 chr10 6188836 6189296 -134127469 - L1 LINE L1 -2974 3172 2682 381 253 66 62 chr10 6189417 6189674 -134127091 - L1 LINE L1 -3623 2523 2266 285 167 0 0 chr10 6189887 6189941 -134126824 + (TG)n Simple_repeat Simple_repeat 1 54 0 218 183 134 12 chr10 6190651 6190733 -134126032 - SUBTEL_sa Satellite Satellite -72 102 11 180 176 0 0 chr10 6191142 6191176 -134125589 + CT-rich Low_complexity Low_complexity 2 35 0 307 284 23 11 chr10 6192685 6192773 -134123992 - L1MC4 LINE L1 -1340 6702 6614 2101 130 3 0 chr10 6192776 6193069 -134123696 - AluSx SINE Alu -18 294 1 298 267 67 17 chr10 6193370 6193490 -134123275 - L2 LINE L2 -7 3306 3181 2043 120 10 19 chr10 6194921 6195229 -134121536 - AluSx SINE Alu -7 305 1 1737 153 12 41 chr10 6195411 6195679 -134121086 - MER46B DNA MER2_type -2497 234 102 2429 84 0 13 chr10 6195679 6195988 -134120777 - AluY SINE Alu -6 305 1 1737 153 12 41 chr10 6195988 6196059 -134120706 - MER46B DNA MER2_type -2629 102 30 2139 118 7 3 chr10 6196527 6196831 -134119934 - AluSx SINE Alu -7 305 1 1857 82 106 0 chr10 6198734 6199019 -134117746 + AluY SINE Alu 1 312 0 324 190 110 33 chr10 6199486 6199662 -134117103 + MER106A DNA MER1_type 2 231 -5 557 215 75 45 chr10 6199668 6199868 -134116897 + L1MC5 LINE L1 7712 7917 -44 2096 88 95 0 chr10 6199882 6200166 -134116599 - AluY SINE Alu 0 311 1 1295 158 10 5 chr10 6200749 6200958 -134115807 + MER2 DNA MER2_type 1 210 -135 241 261 185 0 chr10 6200985 6201050 -134115715 + MER2 DNA MER2_type 268 344 -1 2209 102 30 0 chr10 6201094 6201389 -134115376 + AluSx SINE Alu 1 304 -8 360 284 97 92 chr10 6201552 6201885 -134114880 + L1MC4 LINE L1 7293 7632 -410 198 71 0 0 chr10 6201885 6201913 -134114852 + (ATG)n Simple_repeat Simple_repeat 1 28 0 360 284 97 92 chr10 6201913 6202217 -134114548 + L1MC4 LINE L1 7632 7933 -109 352 206 78 20 chr10 6203076 6203178 -134113587 - L1ME LINE L1 -305 5816 5709 1768 169 32 0 chr10 6204126 6204410 -134112355 - AluJb SINE Alu -19 293 1 1072 128 199 0 chr10 6206705 6206901 -134109864 + MER46A DNA MER2_type 2 236 0 2042 133 7 3 chr10 6208502 6208796 -134107969 - AluSx SINE Alu -17 295 1 2217 126 7 0 chr10 6208798 6209100 -134107665 - AluSx SINE Alu -8 304 1 191 323 104 0 chr10 6209555 6209651 -134107114 + MIR SINE MIR 108 213 -49 221 351 43 21 chr10 6210550 6210644 -134106121 - L3b LINE CR1 -10 1573 1478 254 245 64 21 chr10 6210759 6210853 -134105912 + MER5B DNA MER1_type 81 178 0 351 286 31 0 chr10 6212137 6212235 -134104530 - MER3 DNA MER1_type -96 113 13 225 0 0 0 chr10 6212265 6212290 -134104475 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 219 228 140 0 chr10 6212693 6212750 -134104015 + MIR SINE MIR 21 85 -123 2265 115 0 0 chr10 6212758 6213054 -134103711 - AluSx SINE Alu -16 296 1 243 286 143 10 chr10 6216410 6216508 -134100257 + L2 LINE L2 3162 3272 0 198 0 0 0 chr10 6217287 6217309 -134099456 + (A)n Simple_repeat Simple_repeat 1 22 0 35 71 0 0 chr10 6218781 6218851 -134097914 + AT_rich Low_complexity Low_complexity 1 70 0 312 204 66 109 chr10 6218886 6218934 -134097831 + LTR67 LTR ERVL 3 52 -505 2451 63 17 0 chr10 6218934 6219236 -134097529 - AluY SINE Alu -4 307 1 312 204 66 109 chr10 6219236 6219324 -134097441 + LTR67 LTR ERVL 52 133 -424 2728 45 0 0 chr10 6219572 6219882 -134096883 - AluY SINE Alu -1 310 1 1666 176 42 3 chr10 6219885 6220169 -134096596 - AluSx SINE Alu -13 299 5 239 202 165 28 chr10 6220367 6220476 -134096289 - AluJb SINE Alu -174 128 5 279 212 45 0 chr10 6220500 6220566 -134096199 + LTR67 LTR ERVL 487 555 -2 335 175 34 3 chr10 6220744 6220814 -134095951 - AluS SINE Alu -243 57 3 2144 93 20 13 chr10 6220838 6221138 -134095627 + AluSx SINE Alu 1 302 -10 2060 199 52 22 chr10 6221138 6221596 -134095169 - L1MC3 LINE L1 -1707 6078 5607 498 309 69 15 chr10 6222022 6222284 -134094481 + L2 LINE L2 2228 2503 -811 319 214 29 19 chr10 6222715 6222818 -134093947 - HAL1 LINE L1 -96 2411 2308 391 328 34 6 chr10 6222898 6223075 -134093690 + HAL1 LINE L1 1712 1893 -614 306 286 31 0 chr10 6223079 6223177 -134093588 + HAL1 LINE L1 2064 2164 -343 1923 108 41 7 chr10 6223324 6223619 -134093146 - AluSx SINE Alu -7 305 1 624 220 38 6 chr10 6223668 6223827 -134092938 - HAL1 LINE L1 -721 1786 1623 1012 138 25 0 chr10 6223828 6223987 -134092778 - FRAM SINE Alu -6 170 8 863 258 156 36 chr10 6223991 6224246 -134092519 - HAL1 LINE L1 -868 1639 1416 2164 112 3 0 chr10 6224246 6224542 -134092223 - AluSx SINE Alu -15 297 1 863 258 156 36 chr10 6224542 6224704 -134092061 - HAL1 LINE L1 -1091 1416 1172 1568 144 0 4 chr10 6224872 6225108 -134091657 - AluJo SINE Alu -77 235 1 207 105 0 26 chr10 6225889 6225927 -134090838 + (TTTTTG)n Simple_repeat Simple_repeat 1 37 0 733 158 38 15 chr10 6225929 6226062 -134090703 - FLAM_C SINE Alu -2 141 6 1736 116 0 0 chr10 6226117 6226358 -134090407 + AluSx SINE Alu 58 298 -14 216 0 0 0 chr10 6227245 6227269 -134089496 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2309 74 0 10 chr10 6227273 6227582 -134089183 + AluSc SINE Alu 1 306 -3 322 240 94 0 chr10 6228358 6228454 -134088311 + MLT1J LTR MaLR 379 483 -28 2200 104 3 0 chr10 6228469 6228766 -134087999 + AluSp SINE Alu 2 299 -14 1440 162 19 11 chr10 6228980 6229245 -134087520 - MER1A DNA MER1_type 0 529 263 1694 180 10 10 chr10 6229613 6229913 -134086852 + AluJb SINE Alu 5 304 -8 24 67 0 0 chr10 6231380 6231425 -134085340 + AT_rich Low_complexity Low_complexity 1 45 0 1821 138 7 14 chr10 6231451 6231741 -134085024 + AluSx SINE Alu 7 294 -18 2309 102 0 36 chr10 6231844 6232037 -134084728 + L1PA15 LINE L1 5845 6023 -142 1720 154 33 10 chr10 6232037 6232336 -134084429 + AluJb SINE Alu 1 306 -6 2309 102 0 36 chr10 6232336 6232475 -134084290 + L1PA15 LINE L1 6023 6165 0 1978 82 16 0 chr10 6232542 6232799 -134083966 + AluSx SINE Alu 1 261 -51 851 71 18 0 chr10 6232843 6232955 -134083810 + AluSg/x SINE Alu 185 298 -14 28 0 0 0 chr10 6233625 6233653 -134083112 + AT_rich Low_complexity Low_complexity 1 28 0 1314 217 119 46 chr10 6234223 6234744 -134082021 + MLT1E3 LTR MaLR 32 590 -34 2109 108 3 10 chr10 6234893 6235198 -134081567 - AluSc SINE Alu -6 303 1 225 178 171 112 chr10 6235207 6235359 -134081406 - L1MC4 LINE L1 -2 8040 7880 366 280 21 0 chr10 6235453 6235546 -134081219 - MIR SINE MIR -108 154 60 291 284 0 0 chr10 6235588 6235662 -134081103 - LTR33A LTR ERVL -1 522 449 313 308 60 8 chr10 6235893 6236026 -134080739 + MIR3 SINE MIR 51 190 -18 492 203 92 26 chr10 6236555 6236708 -134080057 + LTR67 LTR ERVL 395 557 0 626 197 15 22 chr10 6236710 6236847 -134079918 - MIR SINE MIR -64 198 63 1674 167 24 17 chr10 6236902 6237224 -134079541 + AluJb SINE Alu 1 312 0 997 163 5 16 chr10 6237458 6237642 -134079123 - AluJb SINE Alu -10 302 121 622 108 32 0 chr10 6237746 6237839 -134078926 - AluJ/FLAM SINE Alu -215 97 2 3492 229 111 3 chr10 6237910 6238857 -134077908 - L1MC4 LINE L1 -237 7805 6757 2216 110 0 10 chr10 6238857 6238879 -134077886 - AluSx SINE Alu -5 307 286 264 100 0 0 chr10 6238879 6238919 -134077846 + (CTTG)n Simple_repeat Simple_repeat 2 41 0 2216 110 0 10 chr10 6238919 6239206 -134077559 - AluSx SINE Alu -26 286 1 428 214 9 0 chr10 6239468 6239580 -134077185 + (ATG)n Simple_repeat Simple_repeat 2 114 0 423 192 73 136 chr10 6240529 6240706 -134076059 + MER5A DNA MER1_type 24 189 0 2054 228 108 67 chr10 6241487 6241968 -134074797 - MER21B LTR ERV1 -51 812 287 1997 117 10 0 chr10 6241968 6242258 -134074507 - AluSx SINE Alu -19 293 1 2054 228 108 67 chr10 6242258 6242539 -134074226 - MER21B LTR ERV1 -576 287 19 324 257 89 20 chr10 6243438 6243539 -134073226 - L2 LINE L2 -16 3297 3190 1938 116 3 31 chr10 6243700 6243987 -134072778 + AluJb SINE Alu 2 281 -31 216 0 0 0 chr10 6243987 6244011 -134072754 + (CA)n Simple_repeat Simple_repeat 2 25 0 1938 116 3 31 chr10 6244011 6244042 -134072723 + AluJb SINE Alu 281 311 -1 22 35 0 0 chr10 6244493 6244522 -134072243 + GC_rich Low_complexity Low_complexity 1 29 0 28 29 0 0 chr10 6244563 6244598 -134072167 + GC_rich Low_complexity Low_complexity 1 35 0 379 238 220 24 chr10 6247214 6247382 -134069383 - LTR33 LTR ERVL -241 280 80 226 262 0 0 chr10 6247431 6247492 -134069273 - LTR33 LTR ERVL -411 110 50 205 267 198 0 chr10 6247642 6247743 -134069022 - L2 LINE L2 0 3313 3193 1886 134 3 17 chr10 6248402 6248700 -134068065 + AluJo SINE Alu 7 300 -12 2288 88 3 0 chr10 6248906 6249212 -134067553 + AluSx SINE Alu 1 307 -5 1119 89 0 182 chr10 6249224 6249460 -134067305 + 7SK RNA RNA 1 193 0 1026 116 103 1 chr10 6249477 6249684 -134067081 - L1MA5A LINE L1 -421 5876 5652 1864 131 10 16 chr10 6249939 6250244 -134066521 + AluSx SINE Alu 1 303 -9 1976 139 0 7 chr10 6250316 6250626 -134066139 + AluSx SINE Alu 1 308 -4 285 235 82 20 chr10 6251542 6251640 -134065125 - MER5B DNA MER1_type -14 164 61 420 271 49 7 chr10 6251640 6251784 -134064981 + MER112 DNA MER1_type 94 243 -17 1605 189 3 13 chr10 6252196 6252497 -134064268 + AluJb SINE Alu 2 299 -13 2022 118 33 7 chr10 6252497 6252801 -134063964 + AluSx SINE Alu 1 312 0 288 263 63 0 chr10 6252925 6253020 -134063745 - L2 LINE L2 -27 3286 3186 2114 95 3 3 chr10 6253171 6253467 -134063298 + AluSx SINE Alu 1 296 -16 565 274 119 51 chr10 6253603 6253848 -134062917 - L2 LINE L2 -342 2972 2745 2045 125 0 7 chr10 6253848 6254145 -134062620 - AluSx SINE Alu -15 297 3 565 274 119 51 chr10 6254145 6254385 -134062380 - L2 LINE L2 -569 2745 2454 2508 46 0 7 chr10 6254797 6255103 -134061662 - AluY SINE Alu -7 304 1 710 161 0 15 chr10 6255567 6255697 -134061068 - L1PB4 LINE L1 -101 6055 5928 315 0 0 0 chr10 6255729 6255764 -134061001 + (TG)n Simple_repeat Simple_repeat 2 36 0 1623 172 7 14 chr10 6255765 6256055 -134060710 - AluJb SINE Alu -24 288 1 189 0 0 0 chr10 6256085 6256106 -134060659 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 1808 108 75 4 chr10 6256107 6256385 -134060380 - AluSg SINE Alu -12 298 1 320 145 0 32 chr10 6256523 6256585 -134060180 + FAM SINE Alu 119 178 -1 2051 95 29 13 chr10 6256588 6256894 -134059871 + AluSp SINE Alu 3 313 0 1556 189 38 0 chr10 6256937 6257228 -134059537 - AluJb SINE Alu -10 302 1 2179 92 7 10 chr10 6257607 6257911 -134058854 + AluSx SINE Alu 3 305 -7 238 223 62 9 chr10 6257912 6258024 -134058741 + L1MC4 LINE L1 7925 8042 0 2017 131 3 6 chr10 6258094 6258406 -134058359 - AluSq SINE Alu -2 311 1 246 187 120 27 chr10 6258411 6258486 -134058279 + L2 LINE L2 2885 2966 -348 370 278 30 54 chr10 6258642 6258808 -134057957 - L1MCa LINE L1 -1339 6983 1996 1155 181 0 23 chr10 6258815 6259030 -134057735 - AluJo SINE Alu -30 282 73 2928 163 45 0 chr10 6259040 6259569 -134057196 - L1MB3 LINE L1 -2 6181 5629 1641 236 79 56 chr10 6259569 6260214 -134056551 - L1MC4a LINE L1 -642 7166 6507 22 70 0 0 chr10 6260832 6260875 -134055890 + GC_rich Low_complexity Low_complexity 1 43 0 405 278 30 0 chr10 6261518 6261651 -134055114 + L3 LINE CR1 1133 1269 -308 3779 183 45 51 chr10 6261665 6262626 -134054139 - LTR5 LTR ERVK -14 955 1 586 101 114 95 chr10 6262854 6262971 -134053794 - L1PA13 LINE L1 -2 6161 6039 1778 143 61 0 chr10 6262971 6263147 -134053618 - AluSx SINE Alu 0 312 109 2138 88 3 7 chr10 6263147 6263442 -134053323 - AluSx SINE Alu -11 301 8 1778 143 61 0 chr10 6263442 6263559 -134053206 - AluSx SINE Alu -203 109 1 586 101 114 95 chr10 6263559 6263599 -134053166 - L1PA13 LINE L1 -124 6039 6001 2080 106 33 0 chr10 6263984 6264286 -134052479 - AluSp SINE Alu -1 312 1 444 262 0 16 chr10 6265509 6265635 -134051130 + MIR SINE MIR 13 136 -126 2045 103 14 3 chr10 6266130 6266420 -134050345 - AluSx SINE Alu -19 293 1 671 171 106 0 chr10 6267615 6267738 -134049027 + AluJo SINE Alu 1 136 -176 2154 77 3 71 chr10 6268180 6268516 -134048249 - AluSp SINE Alu 0 313 1 321 206 119 44 chr10 6268526 6268548 -134048217 + Charlie7 DNA MER1_type 2437 2456 -156 1757 173 16 0 chr10 6268548 6268854 -134047911 - AluJo SINE Alu -1 311 1 321 206 119 44 chr10 6268854 6268991 -134047774 + Charlie7 DNA MER1_type 2456 2608 -4 371 320 29 0 chr10 6269647 6269750 -134047015 - MIR SINE MIR -88 174 69 1667 149 0 0 chr10 6269750 6269998 -134046767 + AluJb SINE Alu 50 297 -15 257 266 41 101 chr10 6270105 6270372 -134046393 + L2 LINE L2 2837 3087 -185 260 191 0 0 chr10 6271312 6271359 -134045406 + MIR3 SINE MIR 108 154 -54 1899 123 23 13 chr10 6271963 6272271 -134044494 - AluSq SINE Alu 0 313 3 284 314 51 7 chr10 6272607 6272744 -134044021 - MIR SINE MIR -104 158 16 997 296 173 18 chr10 6272875 6273541 -134043224 + L1ME3A LINE L1 5348 6116 -54 1477 165 85 0 chr10 6273585 6273845 -134042920 - AluJo SINE Alu -30 282 1 182 293 165 45 chr10 6273887 6274020 -134042745 + MIR3 SINE MIR 34 182 -26 2145 103 16 7 chr10 6274500 6274986 -134041779 - AluSq SINE Alu 0 313 1 259 345 159 0 chr10 6276122 6276267 -134040498 + MIR SINE MIR 95 262 0 413 236 8 79 chr10 6276314 6276441 -134040324 - MIR SINE MIR -110 152 35 917 106 8 8 chr10 6277225 6277357 -134039408 + FLAM_C SINE Alu 1 132 -1 183 129 0 0 chr10 6277380 6277411 -134039354 + (TGGA)n Simple_repeat Simple_repeat 4 34 0 353 280 75 0 chr10 6277523 6277616 -134039149 - L1ME4a LINE L1 -58 6063 5964 1770 176 13 0 chr10 6277628 6277929 -134038836 - AluJo SINE Alu -3 309 5 2661 168 24 43 chr10 6278130 6278176 -134038589 + L1MB3 LINE L1 5657 5702 -481 1369 225 13 22 chr10 6278176 6278487 -134038278 - AluJo SINE Alu -4 308 1 2661 168 24 43 chr10 6278487 6278707 -134038058 + L1MB3 LINE L1 5702 5925 -258 1692 160 76 0 chr10 6278707 6278995 -134037770 + AluJo SINE Alu 1 310 -2 2661 168 24 43 chr10 6278995 6279264 -134037501 + L1MB3 LINE L1 5925 6183 0 754 93 0 0 chr10 6280676 6280773 -134035992 + AluS SINE Alu 1 97 -216 215 79 26 0 chr10 6280781 6280819 -134035946 + (TA)n Simple_repeat Simple_repeat 1 39 0 2460 59 0 10 chr10 6280847 6281154 -134035611 - AluY SINE Alu -7 304 1 2094 139 0 0 chr10 6281202 6281512 -134035253 - AluSx SINE Alu -2 310 1 234 343 28 28 chr10 6281514 6281622 -134035143 - MER5B DNA MER1_type -38 140 33 2208 114 0 3 chr10 6281622 6281928 -134034837 - AluSq SINE Alu -5 308 4 659 151 19 0 chr10 6281938 6282044 -134034721 - FLAM_C SINE Alu -35 108 1 2360 86 3 0 chr10 6282776 6283079 -134033686 - AluSq SINE Alu -9 304 1 25 51 0 0 chr10 6283266 6283305 -134033460 + AT_rich Low_complexity Low_complexity 1 39 0 966 112 8 0 chr10 6283803 6283937 -134032828 - AluJo SINE Alu -177 135 1 401 281 113 20 chr10 6284015 6284218 -134032547 + MLT1J LTR MaLR 1 222 -289 1959 141 0 16 chr10 6284218 6284522 -134032243 + AluSx SINE Alu 1 299 -13 450 200 61 9 chr10 6284968 6285083 -134031682 - L1MC4 LINE L1 -4 8038 7918 342 115 0 0 chr10 6285094 6285146 -134031619 + (TCTA)n Simple_repeat Simple_repeat 1 52 0 183 80 0 0 chr10 6285206 6285231 -134031534 + (TG)n Simple_repeat Simple_repeat 2 26 0 2038 216 65 93 chr10 6285268 6285619 -134031146 - L1MC4 LINE L1 -138 7904 7545 2443 192 29 27 chr10 6285619 6285959 -134030806 - L1MB2 LINE L1 -3 6168 5825 2456 57 0 16 chr10 6285959 6286274 -134030491 - AluY SINE Alu 0 311 2 2443 192 29 27 chr10 6286274 6286455 -134030310 - L1MB2 LINE L1 -346 5825 5646 2038 216 65 93 chr10 6286455 6286649 -134030116 - L1MC4 LINE L1 -497 7545 7347 2350 80 0 0 chr10 6286649 6286949 -134029816 - AluSx SINE Alu -12 300 1 2038 216 65 93 chr10 6286949 6287078 -134029687 - L1MC4 LINE L1 -695 7347 7216 2266 107 0 0 chr10 6287078 6287378 -134029387 - AluSx SINE Alu -12 300 1 2038 216 65 93 chr10 6287378 6287657 -134029108 - L1MC4 LINE L1 -826 7216 6976 809 175 7 7 chr10 6287658 6287795 -134028970 + FLAM_C SINE Alu 5 141 -2 312 203 14 14 chr10 6287795 6287869 -134028896 - L1MC4 LINE L1 -1050 6992 6919 1787 160 0 10 chr10 6287922 6288216 -134028549 - AluSx SINE Alu -21 291 1 200 358 62 0 chr10 6288636 6288717 -134028048 - MIR SINE MIR -80 128 43 198 337 12 12 chr10 6289005 6289088 -134027677 - L3 LINE CR1 -384 1193 1111 387 0 0 0 chr10 6289273 6289316 -134027449 + (CA)n Simple_repeat Simple_repeat 2 44 0 243 88 0 0 chr10 6289480 6289514 -134027251 + (T)n Simple_repeat Simple_repeat 1 34 0 414 0 0 0 chr10 6289794 6289840 -134026925 + (TG)n Simple_repeat Simple_repeat 2 47 0 209 366 37 12 chr10 6290003 6290085 -134026680 - MIR SINE MIR -50 212 129 1507 176 21 35 chr10 6290196 6290509 -134026256 + AluJo SINE Alu 1 309 0 357 325 68 0 chr10 6290555 6290672 -134026093 - L2 LINE L2 0 3272 3148 1093 203 64 88 chr10 6290696 6291149 -134025616 - LTR7 LTR ERV1 -8 442 1 466 331 127 19 chr10 6291544 6291867 -134024898 + L3 LINE CR1 1192 1549 -28 2144 124 3 0 chr10 6291988 6292295 -134024470 - AluSx SINE Alu -1 311 4 1253 127 5 20 chr10 6293255 6293452 -134023313 - AluJ SINE Alu -9 303 110 1911 147 99 27 chr10 6293452 6293953 -134022812 - MLT2A2 LTR ERVL 0 554 2 724 155 0 9 chr10 6293953 6294069 -134022696 - AluJ SINE Alu -197 115 1 1637 146 3 7 chr10 6294071 6294103 -134022662 + Tigger3(Golem) DNA MER2_type 2742 2773 -255 1964 116 29 0 chr10 6294103 6294403 -134022362 - AluSx SINE Alu 0 308 1 1637 146 3 7 chr10 6294403 6294657 -134022108 + Tigger3(Golem) DNA MER2_type 2773 3028 0 891 166 57 26 chr10 6294764 6294957 -134021808 - Tigger2a DNA MER2_type -235 199 1 458 323 45 14 chr10 6294957 6295136 -134021629 - L1M4 LINE L1 -2374 3772 3589 1672 129 0 12 chr10 6295146 6295402 -134021363 + AluSx SINE Alu 60 312 0 2295 97 0 0 chr10 6295618 6295908 -134020857 - AluSx SINE Alu -22 290 1 908 144 24 0 chr10 6295909 6296076 -134020689 - L1MC1 LINE L1 -481 5852 5682 1668 143 10 67 chr10 6296608 6296922 -134019843 - AluJb SINE Alu -10 302 7 217 292 19 97 chr10 6297180 6297334 -134019431 + MIR3 SINE MIR 64 205 -3 22 0 0 0 chr10 6297776 6297798 -134018967 + GC_rich Low_complexity Low_complexity 1 22 0 303 243 0 58 chr10 6298502 6298605 -134018160 + G-rich Low_complexity Low_complexity 6 102 0 254 269 16 44 chr10 6298523 6298705 -134018060 + (CGGGG)n Simple_repeat Simple_repeat 2 178 0 * 23 33 0 0 chr10 6300252 6300282 -134016483 + GC_rich Low_complexity Low_complexity 1 30 0 35 83 0 0 chr10 6300536 6300620 -134016145 + GC_rich Low_complexity Low_complexity 1 84 0 330 311 8 0 chr10 6300918 6301037 -134015728 + CT-rich Low_complexity Low_complexity 2 121 0 22 35 0 0 chr10 6301219 6301248 -134015517 + GC_rich Low_complexity Low_complexity 1 29 0 2318 106 0 0 chr10 6302492 6302804 -134013961 - AluSx SINE Alu 0 312 1 1599 164 0 69 chr10 6302891 6303086 -134013679 - AluJo SINE Alu 0 318 111 9928 33 16 103 chr10 6303086 6304538 -134012227 - SVA Other Other -4 1382 57 207 0 0 0 chr10 6304538 6304561 -134012204 + (GGGAGA)n Simple_repeat Simple_repeat 1 23 0 1599 164 0 69 chr10 6304561 6304703 -134012062 - AluJo SINE Alu -205 113 1 1680 150 31 14 chr10 6305196 6305483 -134011282 - AluJo SINE Alu -20 292 1 198 0 0 0 chr10 6305483 6305505 -134011260 + (T)n Simple_repeat Simple_repeat 1 22 0 1824 103 38 0 chr10 6306585 6306848 -134009917 - AluSq SINE Alu -12 301 29 2194 79 41 0 chr10 6306872 6307163 -134009602 - AluY SINE Alu -8 303 1 284 142 58 24 chr10 6307430 6307460 -134009305 - AluSc SINE Alu -173 126 123 1823 64 8 0 chr10 6307460 6307694 -134009071 - AluY SINE Alu 0 311 76 284 142 58 24 chr10 6307694 6307744 -134009021 - AluSc SINE Alu -176 123 76 * 288 164 30 30 chr10 6307727 6307794 -134008971 - AluY SINE Alu -159 142 76 288 164 30 30 chr10 6307777 6307844 -134008921 - AluY SINE Alu -159 142 76 288 164 30 30 chr10 6307827 6307894 -134008871 - AluY SINE Alu -159 142 76 288 164 30 30 chr10 6307877 6307944 -134008821 - AluY SINE Alu -159 142 76 288 164 30 30 chr10 6307927 6307994 -134008771 - AluY SINE Alu -159 142 76 934 74 16 0 chr10 6307995 6308117 -134008648 - AluYb8 SINE Alu -192 126 3 316 45 0 0 chr10 6308126 6308170 -134008595 - tRNA-Cys-TGC tRNA tRNA -31 44 1 894 149 0 0 chr10 6309770 6309911 -134006854 - FLAM_C SINE Alu -2 141 1 1471 156 71 7 chr10 6310364 6310633 -134006132 + AluJo SINE Alu 2 287 -25 2036 134 27 21 chr10 6311214 6311549 -134005216 + MER1B DNA MER1_type 1 337 0 827 181 17 23 chr10 6311627 6311804 -134004961 - L1PA16 LINE L1 0 6166 5991 260 203 18 74 chr10 6312433 6312596 -134004169 + (CTGGGG)n Simple_repeat Simple_repeat 5 158 0 549 257 47 18 chr10 6312860 6313031 -134003734 + MER5B DNA MER1_type 1 176 -2 626 141 29 106 chr10 6315463 6315520 -134001245 - L1MB3 LINE L1 0 6183 6123 333 0 0 0 chr10 6315520 6315557 -134001208 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 2083 101 0 14 chr10 6315557 6315843 -134000922 - AluSx SINE Alu -30 282 1 626 141 29 106 chr10 6315843 6315954 -134000811 - L1MB3 LINE L1 -58 6125 6027 481 127 0 0 chr10 6316919 6316990 -133999775 - FLAM SINE Alu -15 128 58 225 94 0 0 chr10 6317181 6317213 -133999552 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1851 146 0 4 chr10 6317227 6317507 -133999258 - AluJo SINE Alu -27 285 7 252 0 0 0 chr10 6318053 6318081 -133998684 + (CTG)n Simple_repeat Simple_repeat 2 29 0 264 272 11 11 chr10 6318083 6318175 -133998590 + (TG)n Simple_repeat Simple_repeat 2 93 0 217 186 12 12 chr10 6318196 6318282 -133998483 + (TG)n Simple_repeat Simple_repeat 1 86 0 966 230 59 45 chr10 6319444 6319818 -133996947 - L1MB5 LINE L1 -1 6173 5795 2012 104 28 7 chr10 6320738 6321027 -133995738 - AluSp SINE Alu -18 295 1 1910 137 3 20 chr10 6321589 6321895 -133994870 - AluJb SINE Alu -10 302 2 180 228 0 0 chr10 6323544 6323601 -133993164 + (CGTG)n Simple_repeat Simple_repeat 2 58 0 * 204 254 32 0 chr10 6323579 6323642 -133993123 + (TG)n Simple_repeat Simple_repeat 1 65 0 2421 80 0 0 chr10 6323914 6324215 -133992550 + AluSx SINE Alu 1 301 -11 294 246 16 0 chr10 6324606 6324667 -133992098 + MIR SINE MIR 96 157 -105 285 291 22 82 chr10 6324769 6324951 -133991814 + MIR3 SINE MIR 35 205 -3 873 179 11 17 chr10 6326851 6327133 -133989632 - MER1B DNA MER1_type 0 339 1 499 262 115 47 chr10 6327443 6327634 -133989131 + MIR SINE MIR 37 240 -22 2550 64 0 0 chr10 6327830 6328126 -133988639 - AluSq SINE Alu -17 296 1 22 0 0 0 chr10 6332367 6332389 -133984376 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr10 6332842 6332865 -133983900 + AT_rich Low_complexity Low_complexity 1 23 0 2362 109 0 0 chr10 6332865 6333177 -133983588 - AluSx SINE Alu 0 312 1 192 302 35 35 chr10 6333357 6333443 -133983322 + MIR SINE MIR 66 151 -57 412 299 59 18 chr10 6334083 6334304 -133982461 + L2 LINE L2 2821 3050 -263 2004 138 10 0 chr10 6334687 6334976 -133981789 - AluJb SINE Alu -20 292 1 2136 148 0 0 chr10 6335265 6335575 -133981190 - AluSx SINE Alu -2 310 1 225 0 0 0 chr10 6335588 6335613 -133981152 + (A)n Simple_repeat Simple_repeat 1 25 0 4415 85 5 0 chr10 6335667 6336257 -133980508 - L1PA12 LINE L1 0 6168 5576 233 287 59 20 chr10 6336363 6336464 -133980301 - MIR SINE MIR -98 164 60 2067 131 0 0 chr10 6336793 6337083 -133979682 - AluJb SINE Alu -21 291 2 439 212 71 0 chr10 6337085 6337184 -133979581 + Charlie2 DNA MER1_type 43 148 -2714 2046 115 3 0 chr10 6337388 6337674 -133979091 - AluSx SINE Alu -25 287 1 2541 163 48 39 chr10 6337674 6338018 -133978747 - L1MD3 LINE L1 -22 7973 7621 2351 94 0 7 chr10 6338018 6338315 -133978450 - AluSg SINE Alu -15 295 1 2541 163 48 39 chr10 6338315 6338536 -133978229 - L1MD3 LINE L1 -374 7621 7403 599 186 8 0 chr10 6338540 6338658 -133978107 - MLT1F1 LTR MaLR -447 120 2 865 122 46 8 chr10 6338660 6338791 -133977974 + AluJo SINE Alu 1 136 -176 881 183 11 123 chr10 6338795 6338939 -133977826 - L1MD3 LINE L1 -734 7261 7163 1707 165 13 22 chr10 6338939 6339254 -133977511 - AluJo SINE Alu 0 312 1 881 183 11 123 chr10 6339254 6339394 -133977371 - L1MD3 LINE L1 -832 7163 7009 2304 115 0 0 chr10 6339703 6339998 -133976767 - AluSx SINE Alu -17 295 1 296 330 46 0 chr10 6340118 6340227 -133976538 - L2 LINE L2 -10 3262 3149 1868 182 0 7 chr10 6340828 6341135 -133975630 - AluJo SINE Alu -7 305 1 802 164 31 0 chr10 6341135 6341263 -133975502 - AluJo SINE Alu -177 135 4 406 259 184 6 chr10 6342052 6342210 -133974555 - MIR3 SINE MIR -1 207 22 2325 108 0 0 chr10 6342210 6342505 -133974260 - AluSg SINE Alu -15 295 1 1812 133 0 46 chr10 6342513 6342827 -133973938 - AluJb SINE Alu 0 314 14 731 91 10 0 chr10 6342843 6342942 -133973823 - HY3 scRNA scRNA -1 100 1 2156 106 0 10 chr10 6343394 6343752 -133973013 - AluSx SINE Alu 0 355 1 29 28 0 0 chr10 6343752 6343788 -133972977 + AT_rich Low_complexity Low_complexity 1 36 0 610 223 114 0 chr10 6343788 6343954 -133972811 - L1PA16 LINE L1 -20 6146 5962 285 290 23 97 chr10 6344966 6345142 -133971623 - MIR SINE MIR -70 192 30 4758 147 20 71 chr10 6345417 6345471 -133971294 + L1MA7 LINE L1 5278 5333 -958 2121 120 0 14 chr10 6345471 6345763 -133971002 + AluSx SINE Alu 19 306 -6 4758 147 20 71 chr10 6345763 6346002 -133970763 + L1MA7 LINE L1 5333 5583 -708 2436 92 3 9 chr10 6346002 6346317 -133970448 + AluSp SINE Alu 1 313 0 4758 147 20 71 chr10 6346317 6347087 -133969678 + L1MA7 LINE L1 5583 6287 -4 1042 125 96 82 chr10 6347324 6347394 -133969371 + MLT1A1 LTR MaLR 1 69 -359 2470 59 0 20 chr10 6347394 6347697 -133969068 + AluY SINE Alu 1 297 -14 1042 125 96 82 chr10 6347697 6347976 -133968789 + MLT1A1 LTR MaLR 69 425 -3 568 242 16 59 chr10 6348025 6348211 -133968554 - MER5B DNA MER1_type 0 178 1 2358 110 3 0 chr10 6348799 6349107 -133967658 + AluSg SINE Alu 1 309 -1 479 281 106 102 chr10 6349518 6350028 -133966737 + L1MC4a LINE L1 5599 6061 -60 2352 97 0 7 chr10 6350028 6350328 -133966437 - AluSg1 SINE Alu -11 298 1 479 281 106 102 chr10 6350328 6350385 -133966380 + L1MC4a LINE L1 6061 6116 -5 2229 90 10 10 chr10 6350870 6351159 -133965606 + AluSx SINE Alu 1 289 -23 1689 148 26 22 chr10 6351592 6351903 -133964862 + MER47A DNA MER2_type 1 312 -54 2296 119 3 0 chr10 6351916 6352227 -133964538 - AluSx SINE Alu 0 312 1 2272 97 30 0 chr10 6352235 6352534 -133964231 - AluSx SINE Alu -4 308 1 286 250 0 12 chr10 6354702 6354782 -133961983 + L1ME4a LINE L1 5725 5803 -318 599 280 21 5 chr10 6354799 6354988 -133961777 - LTR16A1 LTR ERVL -14 443 252 324 262 80 43 chr10 6355177 6355364 -133961401 + L1ME4a LINE L1 5800 5993 -128 796 157 0 29 chr10 6356163 6356606 -133960159 + (TCCA)n Simple_repeat Simple_repeat 1 429 0 1071 92 0 0 chr10 6356625 6356778 -133959987 + (TCCA)n Simple_repeat Simple_repeat 4 156 0 192 304 0 0 chr10 6356784 6356830 -133959935 - L2 LINE L2 -16 3297 3252 253 323 23 46 chr10 6357001 6357131 -133959634 - MIR SINE MIR 0 262 136 225 0 0 0 chr10 6357333 6357358 -133959407 + (A)n Simple_repeat Simple_repeat 1 25 0 259 233 12 81 chr10 6357362 6357448 -133959317 - L1ME3A LINE L1 -123 6047 5968 1465 258 65 39 chr10 6357516 6358278 -133958487 - L1ME3A LINE L1 -214 5956 5172 1447 105 5 5 chr10 6358275 6358494 -133958271 + L1PA14 LINE L1 5820 6038 -123 * 1125 96 0 0 chr10 6358497 6358633 -133958132 + AluSq/x SINE Alu 1 136 -177 2273 124 0 6 chr10 6358633 6358947 -133957818 + AluSx SINE Alu 1 312 0 792 123 22 0 chr10 6358949 6359087 -133957678 + L1PA14 LINE L1 6020 6160 -1 2494 62 7 3 chr10 6359093 6359400 -133957365 + AluY SINE Alu 1 308 -3 354 304 0 0 chr10 6359412 6359524 -133957241 - L1ME3A LINE L1 -988 5158 5047 727 254 136 8 chr10 6359526 6359871 -133956894 - LTR50 LTR ERVL 0 795 326 3802 92 0 25 chr10 6359884 6360408 -133956357 - MER9 LTR ERVK 0 511 1 516 234 102 6 chr10 6360452 6360604 -133956161 - LTR50 LTR ERVL -616 159 9 2003 164 3 0 chr10 6360607 6360906 -133955859 - AluSx SINE Alu -12 300 1 1046 288 107 10 chr10 6360909 6361516 -133955249 - L1ME3A LINE L1 -1097 5049 4384 * 3524 254 53 59 chr10 6361503 6361989 -133954776 - L1MC4 LINE L1 0 8042 7554 2494 85 0 0 chr10 6361989 6362296 -133954469 - AluSx SINE Alu 0 312 6 3524 254 53 59 chr10 6362296 6362809 -133953956 - L1MC4 LINE L1 -488 7554 7054 1806 153 10 35 chr10 6362809 6363123 -133953642 - AluJo SINE Alu 0 312 7 3524 254 53 59 chr10 6363123 6363604 -133953161 - L1MC4 LINE L1 -988 7054 6571 594 257 39 45 chr10 6363625 6363804 -133952961 - MER45A DNA AcHobo 0 178 1 2634 209 80 15 chr10 6363890 6364544 -133952221 - MER45B DNA AcHobo -68 972 277 445 213 37 81 chr10 6364555 6364593 -133952172 - MER45B DNA AcHobo -895 145 107 2649 59 0 0 chr10 6364593 6364898 -133951867 + AluSx SINE Alu 1 305 -7 445 213 37 81 chr10 6364898 6364995 -133951770 - MER45B DNA AcHobo -933 107 16 34 0 0 22 chr10 6365271 6365290 -133951475 + AT_rich Low_complexity Low_complexity 1 19 -25 1900 123 90 0 chr10 6365290 6365567 -133951198 + AluSg SINE Alu 1 302 -8 34 0 0 22 chr10 6365567 6365592 -133951173 + AT_rich Low_complexity Low_complexity 19 44 0 2051 154 0 7 chr10 6365660 6365966 -133950799 + AluJb SINE Alu 1 304 -8 305 213 0 16 chr10 6365974 6366035 -133950730 - L1ME3A LINE L1 -1771 4375 4316 646 191 104 0 chr10 6366262 6366377 -133950388 - FLAM_A SINE Alu -5 128 2 2275 92 0 7 chr10 6366770 6367098 -133949667 + AluSq SINE Alu 2 327 0 463 309 116 77 chr10 6367271 6367861 -133948904 + L2 LINE L2 2670 3271 -1 224 319 14 14 chr10 6368479 6368551 -133948214 + MIR SINE MIR 36 107 -155 313 404 7 7 chr10 6368870 6369006 -133947759 - L2 LINE L2 -4 3268 3133 2414 80 3 7 chr10 6369332 6369634 -133947131 + AluSx SINE Alu 1 301 -11 1490 114 0 10 chr10 6369923 6370125 -133946640 - AluSg/x SINE Alu -8 302 103 1722 194 14 81 chr10 6370489 6370845 -133945920 + MLT1B LTR MaLR 1 326 -64 1781 171 24 0 chr10 6370845 6371143 -133945622 + AluJo SINE Alu 1 305 -7 1722 194 14 81 chr10 6371143 6371204 -133945561 + MLT1B LTR MaLR 326 390 0 1226 224 88 42 chr10 6371206 6371485 -133945280 - Charlie4a DNA MER1_type -1458 503 193 1821 160 38 0 chr10 6371485 6371778 -133944987 + AluJb SINE Alu 1 304 -8 1226 224 88 42 chr10 6371778 6371954 -133944811 - Charlie4a DNA MER1_type -1768 193 27 1400 95 53 0 chr10 6372546 6372735 -133944030 - AluSg/x SINE Alu -15 297 99 1757 211 59 51 chr10 6373584 6373759 -133943006 - L1MD2 LINE L1 -24 6335 6163 261 0 0 0 chr10 6373759 6373788 -133942977 + (TG)n Simple_repeat Simple_repeat 2 30 0 1757 211 59 51 chr10 6373788 6374015 -133942750 - L1MD2 LINE L1 -196 6163 5939 2594 111 24 77 chr10 6374015 6374142 -133942623 + MSTA LTR MaLR 1 133 -295 2297 94 43 0 chr10 6374142 6374441 -133942324 - AluSx SINE Alu 0 312 1 2594 111 24 77 chr10 6374441 6374765 -133942000 + MSTA LTR MaLR 133 428 0 1757 211 59 51 chr10 6374765 6374842 -133941923 - L1MD2 LINE L1 -420 5939 5864 2226 105 0 3 chr10 6374842 6375136 -133941629 - AluSc SINE Alu -16 293 1 1757 211 59 51 chr10 6375136 6375193 -133941572 - L1MD2 LINE L1 -495 5864 5809 2153 113 20 3 chr10 6375193 6375495 -133941270 - AluSg SINE Alu -3 307 1 1757 211 59 51 chr10 6375495 6375580 -133941185 - L1MD2 LINE L1 -550 5809 5701 280 226 137 20 chr10 6375626 6375728 -133941037 + L2 LINE L2 3159 3272 0 338 354 97 4 chr10 6375753 6375979 -133940786 + MIR SINE MIR 1 247 -15 383 253 174 47 chr10 6377384 6377637 -133939128 + MLT1J2 LTR MaLR 20 304 -146 3071 87 4 24 chr10 6377726 6378177 -133938588 - L1PB1 LINE L1 0 6151 5710 432 254 61 9 chr10 6378307 6378421 -133938344 - MLT1J LTR MaLR -368 143 24 1223 137 0 0 chr10 6378879 6379054 -133937711 - FAM SINE Alu 0 175 1 2280 98 0 7 chr10 6379892 6380188 -133936577 - AluSq SINE Alu -19 294 1 621 132 0 0 chr10 6380393 6380484 -133936281 - MLT2A2 LTR ERVL -147 306 216 2534 150 17 2 chr10 6380556 6380962 -133935803 + LTR45B LTR ERV1 3 414 -75 2014 222 12 20 chr10 6380994 6381484 -133935281 - L1MCa LINE L1 -3388 3176 2691 3398 169 30 14 chr10 6381489 6382145 -133934620 - L1MB4 LINE L1 0 6180 5514 2273 124 3 0 chr10 6382146 6382453 -133934312 - AluSq SINE Alu -5 308 1 2508 145 15 0 chr10 6382473 6382879 -133933886 - L1MB1 LINE L1 -5 6163 5752 2458 79 0 0 chr10 6382893 6383197 -133933568 - AluY SINE Alu -7 304 1 1527 180 29 26 chr10 6383197 6383287 -133933478 - L1MCa LINE L1 -3948 2616 2528 2090 154 0 0 chr10 6383287 6383598 -133933167 - AluSx SINE Alu -1 311 1 1527 180 29 26 chr10 6383598 6383925 -133932840 - L1MCa LINE L1 -4036 2528 2273 2023 151 3 66 chr10 6383928 6384006 -133932759 + MER7A DNA MER2_type 7 88 -2950 225 0 0 0 chr10 6384006 6384031 -133932734 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1876 151 0 11 chr10 6384031 6384310 -133932455 - AluSx SINE Alu -36 276 1 2023 151 3 66 chr10 6384310 6384595 -133932170 + MER7A DNA MER2_type 86 346 0 1809 158 61 24 chr10 6384595 6385123 -133931642 - L1MCa LINE L1 -4290 2274 1767 13080 26 1 0 chr10 6385123 6387398 -133929367 - L1PA3 LINE L1 0 6155 3880 2296 117 0 16 chr10 6387407 6387724 -133929041 - AluSx SINE Alu 0 312 1 1809 158 61 24 chr10 6387724 6387921 -133928844 - L1MCa LINE L1 -4804 1760 1378 1904 141 48 14 chr10 6388204 6388495 -133928270 + AluSx SINE Alu 1 301 -11 2324 120 0 0 chr10 6388866 6389174 -133927591 - AluSx SINE Alu -4 308 1 2588 63 0 16 chr10 6389193 6389509 -133927256 - AluY SINE Alu 0 311 1 2055 135 0 0 chr10 6390263 6390566 -133926199 - AluSx SINE Alu 0 303 1 2868 78 14 0 chr10 6391185 6391544 -133925221 - THE1B LTR MaLR 0 364 1 3788 208 97 39 chr10 6391675 6392136 -133924629 - L1MCa LINE L1 -4850 1195 762 2204 93 0 14 chr10 6392136 6392446 -133924319 - AluSq SINE Alu 0 306 1 3788 208 97 39 chr10 6392446 6393107 -133923658 - L1MCa LINE L1 -5283 762 7 236 30 30 0 chr10 6393119 6393152 -133923613 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 4479 104 22 2 chr10 6393279 6393901 -133922864 - MER41B LTR ERV1 0 635 1 1678 174 41 0 chr10 6395293 6395586 -133921179 - AluJo SINE Alu -7 305 1 280 325 8 8 chr10 6396618 6396744 -133920021 + L2 LINE L2 2947 3072 -200 252 0 0 0 chr10 6396889 6396917 -133919848 + (T)n Simple_repeat Simple_repeat 1 28 0 303 322 51 17 chr10 6397176 6397294 -133919471 + L2 LINE L2 3138 3259 -13 2271 123 0 19 chr10 6398965 6399281 -133917484 - AluSx SINE Alu -2 310 1 2535 77 7 0 chr10 6399290 6399600 -133917165 - AluSx SINE Alu 0 312 1 342 67 0 0 chr10 6399657 6399670 -133917095 + (CA)n Simple_repeat Simple_repeat 1 58 0 342 67 0 0 chr10 6399670 6399715 -133917050 + (CA)n Simple_repeat Simple_repeat 2 46 0 193 304 81 47 chr10 6399799 6399947 -133916818 - MIR3 SINE MIR -15 193 41 2180 92 44 0 chr10 6400454 6400749 -133916016 + AluSg SINE Alu 2 309 -1 417 265 158 15 chr10 6400778 6400974 -133915791 + MLT1J2 LTR MaLR 111 334 -116 1074 112 0 7 chr10 6401429 6401572 -133915193 - AluSq/x SINE Alu -161 151 10 1057 178 108 91 chr10 6401606 6401892 -133914873 - AluJo SINE Alu -11 301 11 21 0 0 0 chr10 6401901 6401922 -133914843 + AT_rich Low_complexity Low_complexity 1 21 0 802 125 0 76 chr10 6401928 6402072 -133914693 - FLAM_C SINE Alu 0 143 11 1203 169 105 92 chr10 6402106 6402401 -133914364 - AluJo SINE Alu -13 299 1 565 299 35 53 chr10 6402586 6402904 -133913861 - L1MEd LINE L1 -5397 722 411 901 209 0 0 chr10 6402946 6403118 -133913647 - FAM SINE Alu -3 172 1 1345 225 55 55 chr10 6403794 6404216 -133912549 + MLT2C2 LTR ERVL 1 422 -42 338 105 0 18 chr10 6404228 6404285 -133912480 + (CA)n Simple_repeat Simple_repeat 2 57 0 277 57 0 0 chr10 6404285 6404320 -133912445 + MLT2D LTR ERVL 367 401 -13 618 120 17 8 chr10 6404420 6404537 -133912228 + CT-rich Low_complexity Low_complexity 2 119 0 1936 178 62 11 chr10 6404688 6405059 -133911706 + MSTD LTR MaLR 7 396 0 2184 122 0 10 chr10 6405151 6405455 -133911310 + AluSx SINE Alu 1 301 -11 652 218 40 111 chr10 6405822 6406202 -133910563 + L1MC5 LINE L1 7340 7692 -269 370 132 0 0 chr10 6406203 6406256 -133910509 + Alu SINE Alu 2 54 -248 1735 133 0 49 chr10 6406257 6406542 -133910223 + AluSx SINE Alu 12 282 -30 509 268 82 10 chr10 6406576 6406770 -133909995 + L1MC5 LINE L1 7678 7885 -76 2184 114 16 0 chr10 6408392 6408698 -133908067 + AluSx SINE Alu 1 311 -1 3080 248 78 29 chr10 6409353 6410350 -133906415 + MER97b DNA MER1_type? 1 1046 -7 291 362 60 0 chr10 6410561 6410710 -133906055 + L2 LINE L2 3114 3271 -1 866 277 74 38 chr10 6411204 6411677 -133905088 - L1ME4a LINE L1 -25 6096 5607 819 70 53 0 chr10 6412199 6412313 -133904452 - MER41B LTR ERV1 0 635 516 248 218 39 26 chr10 6412317 6412395 -133904370 - L1MC5 LINE L1 -519 7442 7364 2105 131 13 7 chr10 6412400 6412706 -133904059 - AluSx SINE Alu -4 308 1 330 305 135 10 chr10 6413072 6413272 -133903493 + LTR16A LTR ERVL 1 225 -225 1927 134 62 0 chr10 6413391 6413683 -133903082 - AluSx SINE Alu -2 310 1 199 206 0 0 chr10 6415998 6416032 -133900733 - L2 LINE L2 -49 3264 3231 3182 149 28 0 chr10 6416032 6416541 -133900224 + L1PB4 LINE L1 5593 6115 -41 35 63 0 0 chr10 6416554 6416617 -133900148 + AT_rich Low_complexity Low_complexity 1 63 0 2129 125 3 10 chr10 6416837 6417140 -133899625 + AluJb SINE Alu 1 301 -11 1353 193 120 7 chr10 6417370 6417645 -133899120 - AluJb SINE Alu -6 306 1 265 231 39 0 chr10 6417875 6417927 -133898838 - MLT1K LTR MaLR -357 231 178 286 322 80 75 chr10 6418102 6418555 -133898210 + L2 LINE L2 449 903 -2411 190 324 66 81 chr10 6418558 6418694 -133898071 + L2 LINE L2 1089 1222 -2092 936 311 97 40 chr10 6418776 6419955 -133896810 + L2 LINE L2 2056 3308 -5 1307 201 21 49 chr10 6420041 6420329 -133896436 - MLT2B1 LTR ERVL -8 512 233 1390 198 52 7 chr10 6420628 6420916 -133895849 + L1M3 LINE L1 5443 5743 -437 2605 145 9 53 chr10 6420916 6421351 -133895414 + L1MB3 LINE L1 5679 6089 -94 2076 124 0 10 chr10 6421351 6421650 -133895115 - AluSx SINE Alu -16 296 1 2605 145 9 53 chr10 6421650 6421739 -133895026 + L1MB3 LINE L1 6089 6180 -3 1778 170 3 14 chr10 6421890 6422184 -133894581 - AluSx SINE Alu -21 291 1 371 289 108 49 chr10 6422759 6423028 -133893737 + MER109 Unknown Unknown 70 322 -2110 2311 96 11 20 chr10 6423028 6423383 -133893382 + L1PA10 LINE L1 5817 6168 0 371 289 108 49 chr10 6423383 6423471 -133893294 + MER109 Unknown Unknown 322 779 -1653 235 286 12 36 chr10 6423555 6423639 -133893126 + MER109 Unknown Unknown 536 617 -1815 2005 136 3 23 chr10 6424090 6424400 -133892365 - AluSx SINE Alu -8 304 1 292 39 0 58 chr10 6424420 6424472 -133892293 + (TCCA)n Simple_repeat Simple_repeat 3 51 0 798 135 26 17 chr10 6424494 6424971 -133891794 + (TCCA)n Simple_repeat Simple_repeat 1 481 0 2050 141 0 0 chr10 6426388 6426687 -133890078 + AluSx SINE Alu 1 299 -13 289 312 98 17 chr10 6426866 6427039 -133889726 + L3b LINE CR1 1287 1473 -110 2148 123 7 0 chr10 6428112 6428414 -133888351 - AluSx SINE Alu -8 304 1 396 232 145 7 chr10 6430571 6430709 -133886056 + MIR SINE MIR 47 203 -59 938 92 0 7 chr10 6430963 6431116 -133885649 + (GA)n Simple_repeat Simple_repeat 1 152 0 277 219 68 14 chr10 6431346 6431419 -133885346 + MIR SINE MIR 68 144 -64 690 192 8 0 chr10 6431587 6431707 -133885058 + FLAM_A SINE Alu 4 124 -9 243 270 0 0 chr10 6432612 6432675 -133884090 + MIR SINE MIR 180 242 -20 532 296 44 52 chr10 6432758 6433008 -133883757 - MER115 DNA AcHobo -1 692 445 262 286 169 0 chr10 6433005 6433082 -133883683 - MER115 DNA AcHobo -426 267 178 * 311 275 11 0 chr10 6433343 6433434 -133883331 + MIR3 SINE MIR 109 200 -8 574 164 27 0 chr10 6433487 6433597 -133883168 + L1MC1 LINE L1 5792 5904 -429 1921 114 88 0 chr10 6434327 6434599 -133882166 + AluSx SINE Alu 1 296 -16 2213 111 3 32 chr10 6435118 6435458 -133881307 + AluSx SINE Alu 1 312 0 2515 72 0 0 chr10 6435684 6435988 -133880777 + AluY SINE Alu 1 304 -7 1517 228 198 92 chr10 6436162 6436364 -133880401 + LTR24B LTR ERV1 1 180 -455 2162 118 7 3 chr10 6436364 6436670 -133880095 - AluSq SINE Alu -6 307 1 1517 228 198 92 chr10 6436670 6437042 -133879723 + LTR24B LTR ERV1 180 635 0 1044 31 87 0 chr10 6439695 6439822 -133876943 - MER85 DNA T2_type -1 138 1 314 308 31 0 chr10 6440249 6440379 -133876386 - L1ME LINE L1 -299 5822 5689 252 323 152 0 chr10 6440905 6441004 -133875761 + L2 LINE L2 3144 3257 -15 2449 89 0 0 chr10 6441245 6441574 -133875191 + AluSx SINE Alu 1 312 0 298 242 156 8 chr10 6441925 6442053 -133874712 + L1ME4a LINE L1 5975 6121 0 2028 101 3 83 chr10 6443307 6443633 -133873132 + AluSx SINE Alu 1 300 -12 256 316 88 20 chr10 6444160 6444331 -133872434 + MIR SINE MIR 23 202 -60 243 239 14 28 chr10 6445635 6445706 -133871059 + CT-rich Low_complexity Low_complexity 2 71 0 961 167 80 0 chr10 6445816 6445978 -133870787 + MLT1B LTR MaLR 3 177 -213 591 218 24 0 chr10 6445981 6446105 -133870660 + FLAM_A SINE Alu 1 127 -15 943 213 9 28 chr10 6446110 6446304 -133870461 + MLT1B LTR MaLR 179 370 -20 2470 120 25 6 chr10 6446304 6446661 -133870104 - THE1B LTR MaLR 0 364 1 943 213 9 28 chr10 6446661 6446682 -133870083 + MLT1B LTR MaLR 370 390 0 1774 167 3 7 chr10 6447795 6448095 -133868670 + AluSx SINE Alu 1 299 -13 1941 129 181 38 chr10 6449982 6450407 -133866358 + MER66B LTR ERV1 1 486 0 2387 90 0 23 chr10 6451379 6451689 -133865076 + AluSx SINE Alu 1 303 -9 218 195 0 0 chr10 6451849 6451890 -133864875 + L2 LINE L2 3213 3253 -19 2326 95 7 0 chr10 6452051 6452347 -133864418 - AluSx SINE Alu -14 298 1 1966 125 7 10 chr10 6452456 6452744 -133864021 - AluJo SINE Alu -25 287 1 203 333 0 0 chr10 6453193 6453256 -133863509 + GA-rich Low_complexity Low_complexity 4 66 0 * 214 328 11 33 chr10 6453210 6453393 -133863372 + G-rich Low_complexity Low_complexity 2 180 0 1648 155 15 92 chr10 6454109 6454444 -133862321 + AluJo SINE Alu 3 311 -1 510 202 64 35 chr10 6456074 6456247 -133860518 - MIR SINE MIR -57 205 28 1210 184 44 41 chr10 6456814 6457134 -133859631 + MER33 DNA MER1_type 4 324 0 257 321 27 27 chr10 6457378 6457490 -133859275 + MIR3 SINE MIR 13 124 -84 519 296 145 37 chr10 6458326 6458897 -133857868 + L2 LINE L2 2070 2702 -612 250 311 110 6 chr10 6459014 6459178 -133857587 + L2 LINE L2 2878 3058 -255 847 187 30 0 chr10 6459431 6459597 -133857168 + L1PB4 LINE L1 5959 6129 -27 2267 127 0 3 chr10 6459597 6459905 -133856860 + AluSx SINE Alu 1 307 -5 26 0 0 0 chr10 6459942 6459968 -133856797 + AT_rich Low_complexity Low_complexity 1 26 0 1252 140 0 0 chr10 6460329 6460508 -133856257 - AluSg/x SINE Alu -3 309 131 24 32 0 0 chr10 6463930 6463961 -133852804 + AT_rich Low_complexity Low_complexity 1 31 0 275 185 17 17 chr10 6464030 6464149 -133852616 + (TA)n Simple_repeat Simple_repeat 2 120 0 2233 110 3 10 chr10 6465203 6465513 -133851252 + AluSp SINE Alu 1 308 -5 24 24 0 24 chr10 6467434 6467454 -133849311 + AT_rich Low_complexity Low_complexity 1 20 -21 1804 164 3 3 chr10 6467454 6467740 -133849025 - AluJo SINE Alu -26 286 1 24 24 0 24 chr10 6467740 6467761 -133849004 + AT_rich Low_complexity Low_complexity 20 41 0 2434 77 3 0 chr10 6468555 6468855 -133847910 - AluY SINE Alu -10 301 1 312 172 0 0 chr10 6469061 6469119 -133847646 + CT-rich Low_complexity Low_complexity 3 60 0 655 148 28 23 chr10 6469135 6469311 -133847454 + CT-rich Low_complexity Low_complexity 3 179 0 1666 181 0 0 chr10 6469336 6469607 -133847158 - AluJb SINE Alu -39 273 3 649 189 30 40 chr10 6469890 6470091 -133846674 - L1MC5 LINE L1 -37 7924 7726 354 59 0 20 chr10 6470098 6470149 -133846616 + U5 snRNA snRNA 6 55 -61 407 204 12 70 chr10 6470149 6470321 -133846444 - L1MC5 LINE L1 -234 7727 7566 245 320 100 27 chr10 6472047 6472197 -133844568 + MIR SINE MIR 31 191 -71 1924 82 0 0 chr10 6473141 6473372 -133843393 - AluSq SINE Alu -82 231 1 389 268 77 22 chr10 6474151 6474334 -133842431 + Charlie2a DNA MER1_type 1694 1886 -976 2370 182 38 5 chr10 6475122 6475568 -133841197 - LOR1b LTR ERV1 0 461 1 180 0 0 0 chr10 6477111 6477131 -133839634 + (A)n Simple_repeat Simple_repeat 1 20 0 265 234 177 42 chr10 6477500 6477692 -133839073 + L2 LINE L2 3000 3217 -96 180 276 112 43 chr10 6478486 6478602 -133838163 + MIR3 SINE MIR 51 174 -34 306 0 0 0 chr10 6481252 6481286 -133835479 + (T)n Simple_repeat Simple_repeat 1 34 0 501 230 146 34 chr10 6481633 6481872 -133834893 + L1ME1 LINE L1 5901 6166 0 31 0 0 0 chr10 6482172 6482203 -133834562 + AT_rich Low_complexity Low_complexity 1 31 0 1818 131 18 4 chr10 6482205 6482508 -133834257 + AluSx SINE Alu 3 309 0 230 337 0 0 chr10 6482561 6482644 -133834121 + L1ME LINE L1 5476 5558 -563 210 191 0 0 chr10 6482663 6482710 -133834055 + (TATG)n Simple_repeat Simple_repeat 4 50 0 3686 181 9 13 chr10 6482991 6483665 -133833100 + LTR51 LTR ERV1 1 671 0 226 331 106 7 chr10 6483781 6483923 -133832842 + L2 LINE L2 2255 2410 -904 220 323 24 24 chr10 6484150 6484317 -133832448 + L2 LINE L2 2892 3058 -214 597 252 38 0 chr10 6485095 6485254 -133831511 + MIR SINE MIR 98 262 0 273 29 0 0 chr10 6485552 6485586 -133831179 + (TTATG)n Simple_repeat Simple_repeat 1 34 0 2271 85 4 0 chr10 6485586 6485905 -133830860 - AluSx SINE Alu 0 320 1 1656 154 45 45 chr10 6486831 6487117 -133829648 + AluJo SINE Alu 1 286 -26 23 68 0 0 chr10 6487122 6487166 -133829599 + AT_rich Low_complexity Low_complexity 1 44 0 241 265 56 104 chr10 6487901 6488102 -133828663 - MIR SINE MIR -42 220 30 290 115 0 19 chr10 6488897 6488949 -133827816 - MADE1 DNA Mariner 0 80 30 975 125 0 0 chr10 6488959 6489087 -133827678 + AluSq/x SINE Alu 1 128 -184 415 39 0 0 chr10 6489100 6489152 -133827613 - MADE1 DNA Mariner -28 52 1 322 250 48 0 chr10 6489701 6489785 -133826980 + MIR SINE MIR 175 262 0 192 77 0 0 chr10 6489932 6489958 -133826807 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 297 277 162 41 chr10 6489976 6490822 -133825943 - L2 LINE L2 -40 3273 2329 1610 238 65 99 chr10 6491222 6491941 -133824824 + LTR34 LTR ERV1 1 695 -4 434 219 10 146 chr10 6493342 6493534 -133823231 + MIR SINE MIR 61 226 -36 479 241 84 12 chr10 6494721 6494887 -133821878 + MER5A DNA MER1_type 6 183 -6 944 164 77 24 chr10 6494978 6495186 -133821579 + MER20 DNA MER1_type 1 219 0 419 310 29 17 chr10 6495494 6495668 -133821097 - MIR3 SINE MIR -23 185 10 183 121 61 0 chr10 6496509 6496542 -133820223 + MER5C DNA MER1_type 289 323 -1 1413 125 128 76 chr10 6496666 6496872 -133819893 - L1MC1 LINE L1 0 6333 6102 2246 104 3 0 chr10 6496872 6497160 -133819605 - AluSx SINE Alu -23 289 1 1413 125 128 76 chr10 6497160 6497281 -133819484 - L1MC1 LINE L1 -231 6102 5989 340 360 91 28 chr10 6497300 6497664 -133819101 + L1MB3 LINE L1 4745 5131 -1015 22 0 0 0 chr10 6497744 6497766 -133818999 + AT_rich Low_complexity Low_complexity 1 22 0 242 205 36 36 chr10 6497771 6497854 -133818911 + L1MB3 LINE L1 5296 5378 -786 471 266 86 9 chr10 6497897 6498170 -133818595 + MER46C DNA MER2_type 1 327 -11 361 310 13 7 chr10 6498214 6498369 -133818396 + L1MB3 LINE L1 5657 5812 -309 339 44 0 0 chr10 6498431 6498476 -133818289 + (TA)n Simple_repeat Simple_repeat 2 46 0 246 312 50 28 chr10 6498627 6498768 -133817997 - MIR SINE MIR -50 212 69 359 179 51 13 chr10 6499167 6499245 -133817520 + MER65B LTR ERV1 1 81 -450 317 258 31 0 chr10 6501063 6501160 -133815605 - MIR SINE MIR -62 146 47 195 42 0 0 chr10 6502445 6502469 -133814296 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1629 105 113 4 chr10 6502472 6502711 -133814054 - AluSx SINE Alu -31 281 17 2834 120 19 1 chr10 6502942 6503416 -133813349 + MER1A DNA MER1_type 1 529 0 542 299 54 50 chr10 6503533 6503831 -133812934 - L3 LINE CR1 -178 1399 1101 4027 191 24 3 chr10 6503876 6504658 -133812107 - L1MB3 LINE L1 -3 6180 5382 421 342 134 23 chr10 6504660 6505136 -133811629 - L3 LINE CR1 -461 1116 588 219 388 109 0 chr10 6505197 6505362 -133811403 - L3 LINE CR1 -1099 478 296 * 228 317 100 22 chr10 6505358 6505588 -133811177 - L3b LINE CR1 -205 1378 1131 234 306 0 0 chr10 6505818 6505880 -133810885 + MIR SINE MIR 86 147 -61 249 33 0 0 chr10 6507039 6507069 -133809696 + (CAAAAA)n Simple_repeat Simple_repeat 3 32 0 2157 110 10 3 chr10 6508290 6508581 -133808184 - AluSg SINE Alu -15 295 3 393 254 49 78 chr10 6508934 6509053 -133807712 - MIR SINE MIR -32 230 118 1772 199 8 18 chr10 6509053 6509394 -133807371 + L1MB3 LINE L1 5795 6133 -50 2136 109 27 3 chr10 6509394 6509688 -133807077 + AluSg SINE Alu 1 301 -9 1772 199 8 18 chr10 6509688 6509738 -133807027 + L1MB3 LINE L1 6133 6182 -1 393 254 49 78 chr10 6509738 6509823 -133806942 - MIR SINE MIR -144 118 32 5976 25 6 0 chr10 6510130 6510820 -133805945 - L1PA3 LINE L1 -1725 4421 3728 8506 21 1 0 chr10 6510820 6512556 -133804209 + L1PA3 LINE L1 4415 6152 -3 471 81 0 0 chr10 6513179 6513241 -133803524 - MADE1 DNA Mariner -1 79 18 3725 172 29 38 chr10 6513247 6513288 -133803477 - L1MB2 LINE L1 -1 6170 6130 2239 98 0 19 chr10 6513288 6513595 -133803170 - AluSx SINE Alu -11 301 1 3725 172 29 38 chr10 6513595 6513945 -133802820 - L1MB2 LINE L1 -41 6130 5778 2021 154 0 0 chr10 6513945 6514237 -133802528 - AluSx SINE Alu -20 292 1 3725 172 29 38 chr10 6514237 6514617 -133802148 - L1MB2 LINE L1 -393 5778 5405 5725 127 4 8 chr10 6514658 6515046 -133801719 - L1PA13 LINE L1 -1 6162 5774 2517 70 3 13 chr10 6515046 6515359 -133801406 - AluY SINE Alu -1 310 1 5725 127 4 8 chr10 6515359 6515868 -133800897 - L1PA13 LINE L1 -389 5774 5263 1772 180 7 10 chr10 6516124 6516430 -133800335 - AluJb SINE Alu -7 305 1 1689 199 119 11 chr10 6516430 6516892 -133799873 - Charlie1b DNA MER1_type -11 512 1 1776 144 0 0 chr10 6516918 6517181 -133799584 + AluJb SINE Alu 48 310 -2 252 284 22 0 chr10 6517225 6517302 -133799463 + CT-rich Low_complexity Low_complexity 3 137 0 303 336 14 14 chr10 6517310 6517453 -133799312 - L1ME LINE L1 -461 5709 5567 386 129 16 0 chr10 6517738 6517800 -133798965 + MIR SINE MIR 81 143 -65 3160 134 87 0 chr10 6518407 6518935 -133797830 + L1PA16 LINE L1 5592 6165 -1 1925 153 3 7 chr10 6519395 6519703 -133797062 + AluSx SINE Alu 5 311 -1 1872 166 0 7 chr10 6519824 6520119 -133796646 + AluJo SINE Alu 14 306 -6 1128 145 128 4 chr10 6520123 6520358 -133796407 + L1MB4 LINE L1 5917 6180 0 202 331 75 23 chr10 6520427 6520560 -133796205 + L2 LINE L2 1278 1417 -1897 2186 110 14 0 chr10 6523031 6523322 -133793443 - AluSx SINE Alu -17 295 1 584 147 10 0 chr10 6523499 6523601 -133793164 - L1MA4A LINE L1 -2 6301 6199 223 290 27 98 chr10 6523603 6523786 -133792979 + L2 LINE L2 3143 3312 -1 2345 98 0 0 chr10 6524421 6524717 -133792048 + AluY SINE Alu 1 296 -15 1806 168 10 7 chr10 6524766 6525063 -133791702 + AluJb SINE Alu 15 312 0 661 268 172 0 chr10 6526358 6526567 -133790198 + MIR SINE MIR 18 262 0 369 232 24 32 chr10 6527394 6527519 -133789246 - L2 LINE L2 -7 3265 3142 517 176 18 115 chr10 6528280 6528445 -133788320 + MLT1F LTR MaLR 388 536 -6 1609 139 78 20 chr10 6531614 6531909 -133784856 + AluSx SINE Alu 1 312 0 21 57 0 0 chr10 6532107 6532142 -133784623 + AT_rich Low_complexity Low_complexity 1 35 0 2347 88 0 3 chr10 6532164 6532461 -133784304 - AluY SINE Alu -15 296 1 349 288 45 45 chr10 6532789 6532921 -133783844 - L2 LINE L2 0 3313 3182 2327 112 0 0 chr10 6534214 6534518 -133782247 - AluSx SINE Alu -8 304 1 1812 163 7 0 chr10 6535192 6535518 -133781247 + AluSx SINE Alu 6 333 0 6049 85 7 7 chr10 6535890 6536703 -133780062 - L1PA10 LINE L1 -4 6164 5352 520 243 132 0 chr10 6536743 6536879 -133779886 + MER112 DNA MER1_type 97 250 -10 1811 146 17 3 chr10 6537498 6537785 -133778980 + AluJb SINE Alu 1 291 -21 462 254 0 9 chr10 6538068 6538182 -133778583 - MER94 DNA DNA -18 116 4 370 243 76 35 chr10 6538634 6538778 -133777987 - L2 LINE L2 -3 3310 3161 3650 192 21 11 chr10 6539375 6539425 -133777340 + L1MB3 LINE L1 5446 5494 -689 2370 98 0 0 chr10 6539425 6539720 -133777045 + AluSc SINE Alu 3 297 -12 3650 192 21 11 chr10 6539720 6540398 -133776367 + L1MB3 LINE L1 5494 6181 -2 507 238 33 50 chr10 6540423 6540604 -133776161 + MIR SINE MIR 14 191 -71 22 0 0 0 chr10 6540712 6540734 -133776031 + AT_rich Low_complexity Low_complexity 1 22 0 195 42 0 0 chr10 6541204 6541228 -133775537 + (CA)n Simple_repeat Simple_repeat 2 25 0 28 0 0 0 chr10 6543843 6543871 -133772894 + GC_rich Low_complexity Low_complexity 1 28 0 22 80 0 0 chr10 6543951 6544001 -133772764 + GC_rich Low_complexity Low_complexity 1 50 0 2075 134 7 0 chr10 6544933 6545225 -133771540 + AluSx SINE Alu 1 294 -18 195 225 0 0 chr10 6545606 6545646 -133771119 + L2 LINE L2 3262 3301 -12 1860 161 0 23 chr10 6546002 6546307 -133770458 - AluJo SINE Alu -14 298 1 453 272 23 46 chr10 6546315 6546488 -133770277 - MIR SINE MIR -55 207 39 2279 92 3 16 chr10 6546526 6546830 -133769935 - AluSx SINE Alu -12 300 1 225 0 0 0 chr10 6548196 6548221 -133768544 + (A)n Simple_repeat Simple_repeat 1 25 0 448 320 39 43 chr10 6548481 6548737 -133768028 - MIR SINE MIR 0 262 8 315 0 0 0 chr10 6549779 6549814 -133766951 + (CA)n Simple_repeat Simple_repeat 2 36 0 28 48 0 0 chr10 6550644 6550686 -133766079 + AT_rich Low_complexity Low_complexity 1 42 0 560 251 49 0 chr10 6551005 6551168 -133765597 - MIR SINE MIR -51 211 41 252 59 0 0 chr10 6551297 6551331 -133765434 + (CA)n Simple_repeat Simple_repeat 1 34 0 22 0 0 0 chr10 6551433 6551455 -133765310 + AT_rich Low_complexity Low_complexity 1 22 0 1470 258 107 24 chr10 6552679 6553275 -133763490 + L1ME3A LINE L1 5504 6163 -7 200 252 0 75 chr10 6553584 6553691 -133763074 + CT-rich Low_complexity Low_complexity 1 99 0 2451 122 13 5 chr10 6554149 6554535 -133762230 + L1PB1 LINE L1 5763 6151 0 344 284 20 0 chr10 6555573 6555675 -133761090 + MIR3 SINE MIR 59 162 -46 428 276 16 16 chr10 6557523 6557646 -133759119 + L2 LINE L2 3191 3313 0 748 230 45 6 chr10 6557947 6558125 -133758640 - MLT1E2 LTR MaLR 0 626 442 465 299 5 45 chr10 6558335 6558536 -133758229 + L1ME1 LINE L1 5866 6058 -108 207 0 0 0 chr10 6558546 6558569 -133758196 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 1598 132 21 24 chr10 6558591 6558879 -133757886 - L1MA8 LINE L1 -24 6267 5981 412 231 78 25 chr10 6558903 6559023 -133757742 + L1ME2 LINE L1 6045 6178 0 559 189 0 0 chr10 6559115 6559210 -133757555 - L1MB1 LINE L1 -18 6150 6056 281 310 90 19 chr10 6560457 6560612 -133756153 - MIR SINE MIR -73 189 24 3057 153 53 24 chr10 6561016 6561636 -133755129 - L1MA8 LINE L1 -2 6289 5652 1077 182 81 4 chr10 6562217 6562464 -133754301 - L1MA4 LINE L1 -2 6298 6033 1447 127 115 44 chr10 6562464 6562822 -133753943 + MSTA LTR MaLR 1 428 0 228 111 22 0 chr10 6562822 6562867 -133753898 - L1MA4 LINE L1 -263 6037 5992 497 305 69 59 chr10 6563278 6563472 -133753293 - LTR16C LTR ERVL -2 489 289 2082 87 128 42 chr10 6563472 6563807 -133752958 - THE1B LTR MaLR 0 364 1 497 305 69 59 chr10 6563807 6563917 -133752848 - LTR16C LTR ERVL -202 289 182 392 248 16 48 chr10 6564110 6564235 -133752530 - MER117 DNA MER1_type -74 123 3 3528 151 0 6 chr10 6564849 6565378 -133751387 - MER1A DNA MER1_type -1 526 1 216 0 0 0 chr10 6565647 6565671 -133751094 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 393 325 12 30 chr10 6567426 6567595 -133749170 + LTR67 LTR ERVL 389 554 -3 207 0 0 0 chr10 6567910 6567933 -133748832 + (TG)n Simple_repeat Simple_repeat 1 23 0 409 353 22 27 chr10 6568144 6568552 -133748213 + ERVL LTR ERVL 904 1309 -4455 1384 169 98 128 chr10 6568579 6569087 -133747678 - MLT1D LTR MaLR 0 505 13 2476 69 3 0 chr10 6569320 6569623 -133747142 - AluY SINE Alu -7 304 1 227 186 85 0 chr10 6570211 6570270 -133746495 - MIR SINE MIR -2 260 197 2251 88 0 16 chr10 6570270 6570578 -133746187 - AluY SINE Alu -4 307 5 384 265 20 0 chr10 6570816 6570914 -133745851 - MIR SINE MIR -79 129 30 204 324 40 85 chr10 6572083 6572355 -133744410 - L2 LINE L2 -120 3152 2893 182 267 0 33 chr10 6572462 6572522 -133744243 - MIR SINE MIR -35 227 170 789 278 12 0 chr10 6573163 6573336 -133743429 - MER45A DNA AcHobo -1 177 3 195 330 33 0 chr10 6573606 6573697 -133743068 - L3b LINE CR1 -200 1383 1290 354 325 156 50 chr10 6574027 6574482 -133742283 - L2 LINE L2 -3 3310 2808 1221 249 291 29 chr10 6574533 6575163 -133741602 + LTR50 LTR ERVL 1 795 0 409 274 70 35 chr10 6575179 6575380 -133741385 - L2 LINE L2 -843 2471 2264 206 306 51 0 chr10 6575390 6575488 -133741277 - L2 LINE L2 -1223 2091 1989 4616 173 46 20 chr10 6575490 6576858 -133739907 + L1MB8 LINE L1 4768 6176 -2 2097 134 47 33 chr10 6577376 6577735 -133739030 + THE1B LTR MaLR 1 364 0 4530 108 14 47 chr10 6578165 6578908 -133737857 - L1PB1 LINE L1 -2 6149 5432 6669 224 67 103 chr10 6578910 6580404 -133736361 + Charlie6 DNA MER1_type 83 1630 -1870 519 270 0 0 chr10 6580404 6580519 -133736246 + FLAM_A SINE Alu 2 116 -17 2219 60 3 7 chr10 6580520 6580804 -133735961 - L1PA5 LINE L1 -3 6151 5869 1306 138 0 0 chr10 6580809 6581012 -133735753 + AluSg/x SINE Alu 103 305 -5 6669 224 67 103 chr10 6581012 6581838 -133734927 + Charlie6 DNA MER1_type 1634 2521 -979 1125 215 80 10 chr10 6581871 6582159 -133734606 - L1MCa LINE L1 -6075 351 44 236 30 30 0 chr10 6582171 6582204 -133734561 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 4479 104 22 2 chr10 6582331 6582953 -133733812 - MER41B LTR ERV1 0 635 1 1565 174 41 0 chr10 6584345 6584638 -133732127 - AluJo SINE Alu -7 305 1 323 325 8 8 chr10 6585670 6585796 -133730969 + L2 LINE L2 2947 3072 -200 252 0 0 0 chr10 6585941 6585969 -133730796 + (T)n Simple_repeat Simple_repeat 1 28 0 343 296 44 44 chr10 6586228 6586363 -133730402 + L2 LINE L2 3138 3272 0 2151 126 0 0 chr10 6588017 6588319 -133728446 - AluSx SINE Alu -2 310 9 2400 77 7 0 chr10 6588342 6588652 -133728113 - AluSx SINE Alu 0 312 1 342 67 0 0 chr10 6588709 6588722 -133728043 + (CA)n Simple_repeat Simple_repeat 1 58 0 342 67 0 0 chr10 6588722 6588767 -133727998 + (CA)n Simple_repeat Simple_repeat 2 46 0 254 294 105 46 chr10 6588846 6588999 -133727766 - MIR3 SINE MIR -6 202 41 380 360 105 14 chr10 6589189 6589475 -133727290 + L1M4 LINE L1 3613 3924 -2222 2062 92 44 0 chr10 6589506 6589801 -133726964 + AluSg SINE Alu 2 309 -1 429 265 158 15 chr10 6589830 6590026 -133726739 + MLT1J2 LTR MaLR 111 334 -116 1013 112 0 7 chr10 6590481 6590624 -133726141 - AluSq/x SINE Alu -162 151 10 963 178 108 91 chr10 6590658 6590944 -133725821 - AluJo SINE Alu -11 301 11 21 0 0 0 chr10 6590953 6590974 -133725791 + AT_rich Low_complexity Low_complexity 1 21 0 796 125 0 76 chr10 6590980 6591124 -133725641 - FLAM_C SINE Alu 0 143 11 1214 173 105 85 chr10 6591158 6591453 -133725312 - AluJo SINE Alu -1 301 1 566 299 35 53 chr10 6591638 6591956 -133724809 - L1MEd LINE L1 -5397 722 411 913 209 0 0 chr10 6591998 6592170 -133724595 - FAM SINE Alu -3 172 1 1358 225 55 55 chr10 6592846 6593268 -133723497 + MLT2C2 LTR ERVL 1 422 -42 338 105 0 18 chr10 6593280 6593337 -133723428 + (CA)n Simple_repeat Simple_repeat 2 57 0 278 57 0 0 chr10 6593337 6593372 -133723393 + MLT2D LTR ERVL 367 401 -13 618 120 17 8 chr10 6593472 6593589 -133723176 + CT-rich Low_complexity Low_complexity 2 119 0 1936 178 62 11 chr10 6593740 6594111 -133722654 + MSTD LTR MaLR 7 396 0 2056 122 0 10 chr10 6594203 6594507 -133722258 + AluSx SINE Alu 1 301 -11 649 218 40 111 chr10 6594874 6595254 -133721511 + L1MC5 LINE L1 7340 7692 -269 376 132 0 0 chr10 6595255 6595308 -133721457 + Alu SINE Alu 2 54 -246 1628 134 0 50 chr10 6595309 6595592 -133721173 + AluSx SINE Alu 12 280 -32 515 268 82 10 chr10 6595628 6595822 -133720943 + L1MC5 LINE L1 7678 7885 -76 2065 114 16 0 chr10 6597444 6597750 -133719015 + AluSx SINE Alu 1 311 -1 3082 251 77 28 chr10 6598405 6599402 -133717363 + MER97b DNA MER1_type? 1 1046 -7 344 362 60 0 chr10 6599613 6599762 -133717003 + L2 LINE L2 3114 3271 -1 863 277 74 38 chr10 6600256 6600729 -133716036 - L1ME4a LINE L1 -25 6096 5607 819 70 53 0 chr10 6601251 6601365 -133715400 - MER41B LTR ERV1 0 635 516 251 218 39 26 chr10 6601369 6601447 -133715318 - L1MC5 LINE L1 -519 7442 7364 1982 131 13 7 chr10 6601452 6601758 -133715007 - AluSx SINE Alu -4 308 1 350 305 135 10 chr10 6602124 6602324 -133714441 + LTR16A LTR ERVL 1 225 -225 1815 134 62 0 chr10 6602443 6602735 -133714030 - AluSx SINE Alu -2 310 1 187 286 0 0 chr10 6604966 6605008 -133711757 + L2 LINE L2 3256 3297 -16 192 210 210 16 chr10 6605022 6605084 -133711681 - L2 LINE L2 -9 3304 3231 3174 149 28 0 chr10 6605084 6605593 -133711172 + L1PB4 LINE L1 5593 6115 -41 35 63 0 0 chr10 6605606 6605669 -133711096 + AT_rich Low_complexity Low_complexity 1 63 0 2003 125 3 10 chr10 6605889 6606192 -133710573 + AluJb SINE Alu 1 301 -11 1259 193 120 7 chr10 6606422 6606697 -133710068 - AluJb SINE Alu -6 306 1 267 231 39 0 chr10 6606927 6606979 -133709786 - MLT1K LTR MaLR -357 231 178 417 320 80 75 chr10 6607154 6607607 -133709158 + L2 LINE L2 449 903 -2411 229 297 94 80 chr10 6607608 6607746 -133709019 + L2 LINE L2 1083 1222 -2092 1239 310 98 41 chr10 6607828 6609007 -133707758 + L2 LINE L2 2056 3308 -5 1310 201 21 49 chr10 6609093 6609381 -133707384 - MLT2B1 LTR ERVL -8 512 233 1400 198 52 7 chr10 6609680 6609968 -133706797 + L1M3 LINE L1 5443 5743 -437 2583 145 9 53 chr10 6609968 6610403 -133706362 + L1MB3 LINE L1 5679 6089 -94 1957 124 0 10 chr10 6610403 6610702 -133706063 - AluSx SINE Alu -16 296 1 2583 145 9 53 chr10 6610702 6610791 -133705974 + L1MB3 LINE L1 6089 6180 -3 1664 170 3 14 chr10 6610942 6611236 -133705529 - AluSx SINE Alu -21 291 1 366 296 53 29 chr10 6611926 6612080 -133704685 + MER109 Unknown Unknown 531 695 -1737 2318 96 11 20 chr10 6612080 6612435 -133704330 + L1PA10 LINE L1 5817 6168 0 366 296 53 29 chr10 6612435 6612523 -133704242 + MER109 Unknown Unknown 695 779 -1653 239 286 12 36 chr10 6612607 6612691 -133704074 + MER109 Unknown Unknown 536 617 -1815 2605 217 65 74 chr10 6612875 6613757 -133703008 + MER109 Unknown Unknown 535 1408 -1024 209 276 0 0 chr10 6614982 6615040 -133701725 + T-rich Low_complexity Low_complexity 2 59 0 703 144 17 8 chr10 6615645 6615763 -133701002 - FLAM_C SINE Alu -18 125 7 1309 140 4 13 chr10 6615892 6616121 -133700644 - AluJb SINE Alu 0 312 86 2174 58 0 42 chr10 6616425 6616734 -133700031 - AluY SINE Alu -15 296 1 436 244 151 8 chr10 6616752 6616871 -133699894 + MER5B DNA MER1_type 1 136 -42 261 152 0 22 chr10 6616976 6617022 -133699743 + MER20 DNA MER1_type 100 144 -75 495 167 0 0 chr10 6617022 6617112 -133699653 + GA-rich Low_complexity Low_complexity 1 90 0 266 146 83 0 chr10 6617112 6617160 -133699605 - AluJ/FRAM SINE Alu -20 282 231 195 260 120 0 chr10 6617168 6617218 -133699547 + MER5B DNA MER1_type 123 178 0 187 265 98 78 chr10 6617236 6617276 -133699489 - L2 LINE L2 -22 3291 3253 1419 195 54 41 chr10 6617276 6617645 -133699120 + MLT1A2 LTR MaLR 1 374 0 187 265 98 78 chr10 6617645 6617706 -133699059 - L2 LINE L2 -60 3253 3188 1968 128 0 7 chr10 6617846 6618164 -133698601 + AluSx SINE Alu 1 312 0 1344 146 24 0 chr10 6618384 6618596 -133698169 + MER20 DNA MER1_type 1 217 -2 222 368 105 0 chr10 6618626 6618740 -133698025 - MIR SINE MIR -77 185 60 254 206 0 44 chr10 6619434 6619485 -133697280 - MLT2B1 LTR ERVL 0 520 471 2334 120 52 14 chr10 6619485 6619834 -133696931 - THE1B LTR MaLR 0 364 3 254 206 0 44 chr10 6619834 6619850 -133696915 - MLT2B1 LTR ERVL -49 471 456 1360 201 99 43 chr10 6619903 6620299 -133696466 - MLT2B1 LTR ERVL -37 377 4 934 177 6 6 chr10 6620441 6620605 -133696160 + MER3 DNA MER1_type 41 204 -5 527 231 0 0 chr10 6620838 6620942 -133695823 - L2 LINE L2 0 3272 3169 228 260 260 0 chr10 6621017 6621113 -133695652 - L2 LINE L2 -5 3308 3188 363 291 64 71 chr10 6621168 6621204 -133695561 - MIR SINE MIR -75 187 152 2056 110 7 7 chr10 6621204 6621503 -133695262 - AluSg SINE Alu -11 299 1 363 291 64 71 chr10 6621503 6621607 -133695158 - MIR SINE MIR -110 152 48 237 98 0 0 chr10 6622303 6622344 -133694421 + (TTTC)n Simple_repeat Simple_repeat 1 41 0 1469 163 64 34 chr10 6622348 6622371 -133694394 - AluJb SINE Alu -8 304 283 437 0 0 19 chr10 6622371 6622425 -133694340 + (TCTCC)n Simple_repeat Simple_repeat 2 54 0 1469 163 64 34 chr10 6622425 6622696 -133694069 - AluJb SINE Alu -29 283 1 1218 188 125 15 chr10 6622705 6622977 -133693788 - AluJo SINE Alu 0 302 1 22 35 0 0 chr10 6623175 6623204 -133693561 + AT_rich Low_complexity Low_complexity 1 29 0 441 280 159 5 chr10 6623374 6623563 -133693202 + MLT1I LTR MaLR 186 403 -6 208 191 132 29 chr10 6623633 6623701 -133693064 + L3b LINE CR1 1263 1337 -246 364 322 60 38 chr10 6623753 6623936 -133692829 + MIR SINE MIR 21 207 -55 306 197 26 0 chr10 6623997 6624114 -133692651 + (TA)n Simple_repeat Simple_repeat 2 121 0 303 327 28 19 chr10 6624152 6624259 -133692506 - L1MC4 LINE L1 -1331 6711 6604 369 324 93 0 chr10 6625305 6625487 -133691278 - L2 LINE L2 -420 2894 2696 3221 152 9 12 chr10 6625497 6626055 -133690710 + L1MB3 LINE L1 5587 6142 -41 1829 133 3 63 chr10 6626055 6626370 -133690395 + AluSx SINE Alu 1 296 -16 227 189 0 0 chr10 6626370 6626423 -133690342 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 299 96 19 0 chr10 6626423 6626475 -133690290 + L1MB3 LINE L1 6131 6183 0 247 284 30 113 chr10 6626478 6626946 -133689819 - L2 LINE L2 -620 2694 2266 442 173 6 0 chr10 6627179 6627259 -133689506 + L1MA7 LINE L1 5857 5940 -240 1371 105 10 29 chr10 6627260 6627469 -133689296 - AluSg/x SINE Alu -9 301 97 1525 183 39 39 chr10 6627470 6627825 -133688940 + L1MA7 LINE L1 5935 6289 -2 2187 111 17 0 chr10 6628506 6628804 -133687961 + AluSx SINE Alu 3 305 -7 341 356 8 0 chr10 6629398 6629516 -133687249 + (TG)n Simple_repeat Simple_repeat 2 120 0 660 240 121 96 chr10 6630465 6630944 -133685821 + MLT1J LTR MaLR 1 491 -20 1256 103 0 11 chr10 6631452 6631745 -133685020 + (TCCA)n Simple_repeat Simple_repeat 1 469 0 407 266 87 39 chr10 6631778 6631985 -133684780 - MIR SINE MIR -44 218 2 1700 178 16 7 chr10 6633022 6633331 -133683434 - AluJo SINE Alu 0 312 1 254 237 101 35 chr10 6635086 6635255 -133681510 + Charlie7 DNA MER1_type 2390 2569 -43 2284 91 0 0 chr10 6635275 6635562 -133681203 - AluSx SINE Alu -12 300 14 180 97 0 0 chr10 6635581 6635612 -133681153 + (A)n Simple_repeat Simple_repeat 1 31 0 1477 204 36 68 chr10 6636818 6637292 -133679473 + L1MC5 LINE L1 6726 7183 -787 348 266 65 72 chr10 6637486 6637764 -133679001 - L2 LINE L2 -190 3082 2807 312 227 0 0 chr10 6638123 6638198 -133678567 + MER53 DNA DNA 1 75 -114 341 237 68 59 chr10 6638359 6638372 -133678393 - L2 LINE L2 -13 3300 3289 495 0 0 0 chr10 6638372 6638427 -133678338 + (TCCA)n Simple_repeat Simple_repeat 2 56 0 341 237 68 59 chr10 6638427 6638531 -133678234 - L2 LINE L2 -24 3289 3182 592 228 153 36 chr10 6638584 6638918 -133677847 + L1ME4a LINE L1 5745 6117 -4 200 333 0 0 chr10 6639000 6639063 -133677702 + MIR SINE MIR 68 130 -78 267 31 0 0 chr10 6639269 6639301 -133677464 + (TG)n Simple_repeat Simple_repeat 2 33 0 210 250 120 28 chr10 6641194 6641302 -133675463 + MIR SINE MIR 83 200 -62 437 234 80 106 chr10 6642342 6642692 -133674073 - L1MEd LINE L1 -4869 1250 910 2889 144 214 113 chr10 6642709 6642883 -133673882 - L1 LINE L1 -1833 5273 5118 7581 26 0 4 chr10 6642883 6643900 -133672865 - L1PA3 LINE L1 0 6155 5132 2889 144 214 113 chr10 6643900 6644754 -133672011 - L1 LINE L1 -1988 5118 4141 3890 210 70 51 chr10 6644755 6645421 -133671344 - L1 LINE L1 -3024 4082 3431 471 78 0 0 chr10 6645421 6645485 -133671280 + (TA)n Simple_repeat Simple_repeat 1 64 0 3890 210 70 51 chr10 6645485 6647933 -133668832 - L1 LINE L1 -3675 3431 7 182 373 25 8 chr10 6649675 6649793 -133666972 + L2 LINE L2 2907 3026 -246 557 120 9 56 chr10 6650192 6650254 -133666511 + L1MB3 LINE L1 6081 6137 -46 1540 223 13 21 chr10 6650254 6650631 -133666134 - MLT1A2 LTR MaLR 0 374 1 557 120 9 56 chr10 6650631 6650676 -133666089 + L1MB3 LINE L1 6137 6183 0 246 216 0 0 chr10 6650703 6650754 -133666011 + L1MC4 LINE L1 6652 6702 -1340 231 114 0 0 chr10 6650761 6650796 -133665969 + (TA)n Simple_repeat Simple_repeat 1 35 0 844 213 100 108 chr10 6651585 6652092 -133664673 - MER34C LTR ERV1 -1 584 80 3057 120 5 0 chr10 6652092 6652524 -133664241 + MER57B LTR ERV1 1 434 0 844 213 100 108 chr10 6652524 6652565 -133664200 - MER34C LTR ERV1 -505 80 40 2474 134 31 24 chr10 6652911 6653336 -133663429 - MSTA LTR MaLR 0 428 1 186 376 77 0 chr10 6653816 6653933 -133662832 - MIR3 SINE MIR -29 179 54 3305 157 35 2 chr10 6654338 6654874 -133661891 + MER41C LTR ERV1 1 554 0 224 302 0 0 chr10 6655011 6655064 -133661701 - MIR SINE MIR -135 73 21 44098 29 21 1 chr10 6655607 6661639 -133655126 - L1HS LINE L1 0 6155 1 901 267 185 18 chr10 6661698 6662170 -133654595 - MLT1G1 LTR MaLR 0 595 1 450 219 203 0 chr10 6662226 6662349 -133654416 - MER5A DNA MER1_type -1 188 41 379 191 0 0 chr10 6662639 6662707 -133654058 + MER57B LTR ERV1 38 105 -329 198 356 45 15 chr10 6662828 6662960 -133653805 - L2 LINE L2 -9 3304 3169 1633 171 29 0 chr10 6663069 6663372 -133653393 - AluJo SINE Alu 0 311 1 1779 193 34 3 chr10 6663377 6663765 -133653000 - L1MA4 LINE L1 0 6300 5901 1773 164 52 27 chr10 6664168 6664533 -133652232 - THE1C LTR MaLR -1 374 1 37 0 0 0 chr10 6664615 6664652 -133652113 + AT_rich Low_complexity Low_complexity 1 37 0 745 222 0 0 chr10 6664928 6665063 -133651702 + MER63A DNA MER1_type 51 185 -25 577 207 117 0 chr10 6665067 6665178 -133651587 + AluJb SINE Alu 137 260 -52 234 330 37 28 chr10 6665260 6665369 -133651396 + L2 LINE L2 3151 3260 -12 2241 110 78 26 chr10 6665410 6665756 -133651009 - THE1B LTR MaLR 0 364 1 11980 86 14 3 chr10 6665756 6667318 -133649447 - THE1B-int LTR MaLR 0 1580 1 2267 97 69 26 chr10 6667318 6667667 -133649098 - THE1B LTR MaLR 0 364 1 1608 175 33 0 chr10 6669605 6669906 -133646859 + AluJo SINE Alu 1 310 0 216 0 0 0 chr10 6670249 6670273 -133646492 + (T)n Simple_repeat Simple_repeat 1 24 0 201 196 0 0 chr10 6672821 6672867 -133643898 + (CA)n Simple_repeat Simple_repeat 1 46 0 576 223 0 0 chr10 6672878 6673053 -133643712 + (CA)n Simple_repeat Simple_repeat 2 176 0 264 176 0 0 chr10 6673083 6673134 -133643631 - MER4-int LTR ERV1 -5436 1162 1112 546 199 0 32 chr10 6673152 6673338 -133643427 + (CA)n Simple_repeat Simple_repeat 1 180 0 2289 110 13 0 chr10 6673446 6673754 -133643011 + AluSx SINE Alu 1 312 0 395 293 93 37 chr10 6673880 6674233 -133642532 - HAL1 LINE L1 -4 2503 2095 1454 251 73 19 chr10 6674233 6674700 -133642065 - MLT1F1 LTR MaLR 0 567 76 2192 215 78 23 chr10 6674711 6675273 -133641492 - MLT1E LTR MaLR 0 593 1 330 234 138 0 chr10 6675286 6675380 -133641385 - L1MC4a LINE L1 0 7808 7731 * 4016 270 113 34 chr10 6675378 6676604 -133640161 - HAL1 LINE L1 -419 2088 652 5065 104 9 11 chr10 6676604 6677297 -133639468 + LTR8 LTR ERV1 1 691 0 4016 270 113 34 chr10 6677297 6678004 -133638761 - HAL1 LINE L1 -1855 652 2 3970 118 37 5 chr10 6678326 6678919 -133637846 - LTR9 LTR ERV1 0 612 1 879 223 72 5 chr10 6679187 6679380 -133637385 - MER58A DNA MER1_type -18 206 1 2198 94 0 16 chr10 6679539 6679846 -133636919 - AluSg SINE Alu -8 302 1 1363 129 0 53 chr10 6680907 6681028 -133635737 - LTR8 LTR ERV1 0 691 584 2567 49 0 7 chr10 6681028 6681335 -133635430 - AluY SINE Alu -6 305 1 1363 129 0 53 chr10 6681335 6681422 -133635343 - LTR8 LTR ERV1 -107 584 494 2623 87 45 6 chr10 6681430 6681787 -133634978 - LTR8 LTR ERV1 -320 371 1 4241 193 19 30 chr10 6682224 6683082 -133633683 - L1MB7 LINE L1 0 6184 5318 1947 124 32 0 chr10 6683082 6683365 -133633400 - AluSx SINE Alu -20 292 1 4241 193 19 30 chr10 6683365 6683614 -133633151 - L1MB7 LINE L1 -866 5318 5068 2221 118 3 3 chr10 6683614 6683918 -133632847 + AluSq SINE Alu 1 304 -9 4241 193 19 30 chr10 6683918 6684310 -133632455 - L1MB7 LINE L1 -1116 5068 4698 235 355 74 8 chr10 6684564 6684685 -133632080 - L2 LINE L2 -1 3271 3143 1790 140 20 43 chr10 6684714 6685014 -133631751 - AluJb SINE Alu -1 311 19 225 175 0 0 chr10 6685186 6685226 -133631539 + L2 LINE L2 3258 3297 -16 225 291 64 0 chr10 6686043 6686153 -133630612 + MIR SINE MIR 16 132 -130 291 309 50 55 chr10 6686172 6686373 -133630392 + L2 LINE L2 3107 3306 -7 233 333 11 0 chr10 6686360 6686453 -133630312 + MIR SINE MIR 130 223 -39 * 316 233 14 0 chr10 6686529 6686602 -133630163 - MER94 DNA DNA -13 121 48 620 212 8 15 chr10 6686715 6686847 -133629918 + FLAM_A SINE Alu 12 142 0 2028 169 92 43 chr10 6686929 6687374 -133629391 + LTR24 LTR ERV1 1 467 0 2200 66 38 0 chr10 6688030 6688317 -133628448 + L1PA7 LINE L1 5853 6150 -4 198 0 0 0 chr10 6688343 6688365 -133628400 + (A)n Simple_repeat Simple_repeat 1 22 0 1776 143 89 4 chr10 6688625 6688905 -133627860 + AluSg SINE Alu 1 304 -6 223 179 0 71 chr10 6689749 6689805 -133626960 + L2 LINE L2 3262 3313 0 464 86 14 0 chr10 6690189 6690259 -133626506 + (GA)n Simple_repeat Simple_repeat 2 72 0 753 125 24 18 chr10 6690339 6690507 -133626258 + CT-rich Low_complexity Low_complexity 3 171 0 909 148 0 16 chr10 6690510 6690693 -133626072 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 802 202 11 7 chr10 6690684 6690946 -133625819 + CT-rich Low_complexity Low_complexity 1 262 0 * 1885 167 13 3 chr10 6690954 6691254 -133625511 - AluSx SINE Alu -9 303 1 386 151 48 8 chr10 6693442 6693568 -133623197 + (TG)n Simple_repeat Simple_repeat 1 131 0 265 240 48 19 chr10 6693585 6693689 -133623076 + (TG)n Simple_repeat Simple_repeat 2 108 0 1603 204 54 104 chr10 6693698 6694331 -133622434 - L1MC5 LINE L1 -72 7889 7289 2188 109 10 0 chr10 6694332 6694626 -133622139 - AluSq SINE Alu -16 297 1 498 290 105 29 chr10 6694743 6695057 -133621708 - L1ME LINE L1 -397 5773 5436 2285 122 0 0 chr10 6695262 6695566 -133621199 - AluSx SINE Alu -8 304 1 298 250 43 122 chr10 6696523 6696672 -133620093 + MER20B DNA MER1_type 43 176 -43 2271 101 20 0 chr10 6696672 6696969 -133619796 + AluSx SINE Alu 1 303 -9 298 250 43 122 chr10 6696969 6697007 -133619758 + MER20B DNA MER1_type 176 215 -4 559 288 7 0 chr10 6697161 6697314 -133619451 + MIR SINE MIR 109 262 0 787 181 100 0 chr10 6697558 6697718 -133619047 + MER58A DNA MER1_type 46 221 -3 659 218 84 14 chr10 6698038 6698180 -133618585 - FRAM SINE Alu -13 153 2 420 311 73 39 chr10 6698301 6698709 -133618056 + L1M4 LINE L1 4562 4983 -1163 2487 75 0 0 chr10 6698916 6699223 -133617542 - AluY SINE Alu -4 307 1 297 0 0 0 chr10 6699446 6699479 -133617286 + (CA)n Simple_repeat Simple_repeat 1 33 0 189 0 0 0 chr10 6699509 6699530 -133617235 + (CA)n Simple_repeat Simple_repeat 1 21 0 940 269 78 14 chr10 6699856 6700202 -133616563 + L1MEc LINE L1 39 406 -5990 1686 260 38 66 chr10 6700205 6700943 -133615822 + L1MEc LINE L1 613 1325 -5071 2109 134 0 0 chr10 6700943 6701234 -133615531 - AluSx SINE Alu -21 291 1 1686 260 38 66 chr10 6701234 6701363 -133615402 + L1MEc LINE L1 1325 1456 -4940 474 18 0 0 chr10 6701373 6701428 -133615337 + (TA)n Simple_repeat Simple_repeat 2 56 0 2182 113 0 10 chr10 6701718 6702018 -133614747 - AluSx SINE Alu -15 297 1 5219 90 3 4 chr10 6702189 6702899 -133613866 - L1PB2 LINE L1 -1 6150 5442 776 147 41 14 chr10 6704742 6705182 -133611583 + (TCTA)n Simple_repeat Simple_repeat 1 452 0 205 310 17 0 chr10 6705209 6705267 -133611498 + (TG)n Simple_repeat Simple_repeat 2 60 0 2068 239 95 86 chr10 6705294 6705657 -133611108 - HAL1 LINE L1 -131 2376 2018 2173 135 0 0 chr10 6705657 6705960 -133610805 - AluSx SINE Alu -9 303 1 2024 81 0 4 chr10 6705969 6706216 -133610549 - AluSg SINE Alu -22 288 43 2068 239 95 86 chr10 6706216 6707087 -133609678 - HAL1 LINE L1 -496 2011 1121 1782 181 3 0 chr10 6707176 6707468 -133609297 + AluJo SINE Alu 3 295 -17 635 211 24 0 chr10 6707468 6707591 -133609174 - MER3 DNA MER1_type -80 129 4 273 352 24 8 chr10 6708141 6708266 -133608499 - MIR SINE MIR 0 262 136 380 268 31 24 chr10 6708293 6708420 -133608345 - MIR SINE MIR -62 146 19 465 333 75 9 chr10 6708426 6708639 -133608126 + MIR SINE MIR 11 237 -25 2420 78 7 3 chr10 6711197 6711493 -133605272 - AluSg SINE Alu -13 297 1 734 144 0 24 chr10 6711664 6711789 -133604976 + FLAM_C SINE Alu 21 142 -1 260 296 167 0 chr10 6712215 6712323 -133604442 - MIR3 SINE MIR -30 178 53 25 31 0 0 chr10 6712664 6712696 -133604069 + AT_rich Low_complexity Low_complexity 1 32 0 1619 78 0 0 chr10 6712814 6713007 -133603758 - AluSq SINE Alu -120 193 1 202 274 0 16 chr10 6714701 6714763 -133602002 + GA-rich Low_complexity Low_complexity 4 64 0 1071 174 76 27 chr10 6715690 6715914 -133600851 - AluJb SINE Alu 0 312 78 1642 113 0 0 chr10 6715914 6716126 -133600639 - AluSq SINE Alu -101 212 1 271 231 141 25 chr10 6717134 6717255 -133599510 + MIR SINE MIR 51 185 -77 529 317 0 11 chr10 6717267 6717447 -133599318 + (CA)n Simple_repeat Simple_repeat 2 179 0 225 243 0 0 chr10 6717476 6717546 -133599219 + (CA)n Simple_repeat Simple_repeat 1 70 0 335 248 128 18 chr10 6718574 6718683 -133598082 + MIR3 SINE MIR 73 193 -15 294 323 79 0 chr10 6719316 6719443 -133597322 + L2 LINE L2 3136 3272 0 236 278 33 0 chr10 6719581 6719671 -133597094 + L1PB4 LINE L1 6064 6156 0 2334 100 10 10 chr10 6719720 6720031 -133596734 + AluSx SINE Alu 1 311 -1 32 0 0 0 chr10 6720341 6720373 -133596392 + AT_rich Low_complexity Low_complexity 1 32 0 1666 57 0 0 chr10 6720887 6721080 -133595685 - AluY SINE Alu -13 298 106 1320 105 96 0 chr10 6721576 6721785 -133594980 + MER30 DNA MER1_type 1 229 -1 1764 160 3 7 chr10 6721812 6722099 -133594666 + AluJb SINE Alu 11 296 -16 453 264 16 8 chr10 6722272 6722393 -133594372 - L1MD2 LINE L1 -17 6342 6221 1431 212 67 6 chr10 6722410 6722740 -133594025 - L1MD2 LINE L1 -215 6144 5795 1471 217 47 25 chr10 6723131 6723490 -133593275 + MLT1A2 LTR MaLR 1 367 -7 2471 75 0 7 chr10 6723618 6723924 -133592841 - AluY SINE Alu -7 304 1 1775 170 0 27 chr10 6724569 6724869 -133591896 - AluJo SINE Alu -20 292 1 363 203 14 0 chr10 6725392 6725461 -133591304 - MER8 DNA MER2_type 0 239 170 * 2536 139 59 5 chr10 6725450 6725873 -133590892 + Tigger2 DNA MER2_type 2273 2718 0 2091 100 94 26 chr10 6725880 6726231 -133590534 + THE1C LTR MaLR 1 375 0 2101 116 14 3 chr10 6726678 6726970 -133589795 + AluSx SINE Alu 1 295 -17 1488 108 5 0 chr10 6727219 6727413 -133589352 - AluSp SINE Alu -118 195 1 492 191 35 43 chr10 6727428 6727543 -133589222 - FLAM_A SINE Alu -1 141 28 2286 111 0 0 chr10 6728651 6728948 -133587817 + AluSq SINE Alu 1 297 -16 1817 164 43 27 chr10 6729282 6729653 -133587112 + L1MA8 LINE L1 5639 6015 -276 943 175 18 0 chr10 6729651 6729822 -133586943 + L1MB2 LINE L1 5768 5941 -230 * 332 122 0 0 chr10 6729831 6729880 -133586885 + MADE1 DNA Mariner 26 74 -6 1306 134 29 34 chr10 6729880 6730034 -133586731 + L1MB2 LINE L1 5932 6086 -85 2083 113 48 0 chr10 6730034 6730327 -133586438 - AluSx SINE Alu -4 308 2 1306 134 29 34 chr10 6730327 6730411 -133586354 + L1MB2 LINE L1 6086 6169 -2 515 124 27 2 chr10 6730328 6730424 -133586341 + L1MB2 LINE L1 6085 6169 -2 219 146 0 0 chr10 6730663 6730704 -133586061 + (CA)n Simple_repeat Simple_repeat 2 42 0 2302 71 7 0 chr10 6730841 6731121 -133585644 + AluSx SINE Alu 29 310 -2 181 356 54 13 chr10 6732072 6732221 -133584544 - MIR SINE MIR -44 218 64 2439 91 0 3 chr10 6732329 6732637 -133584128 - AluSx SINE Alu -5 307 1 2456 74 0 3 chr10 6733098 6733395 -133583370 + AluSc SINE Alu 1 296 -13 2168 110 3 3 chr10 6734387 6734678 -133582087 - AluSc SINE Alu -18 291 1 38262 31 4 0 chr10 6734757 6740056 -133576709 + L1PA3 LINE L1 840 6155 0 242 327 135 18 chr10 6740495 6740822 -133575943 - L2 LINE L2 -817 2497 2133 683 221 25 25 chr10 6741698 6741861 -133574904 + L1MD2 LINE L1 6195 6357 -2 263 221 91 0 chr10 6742162 6742239 -133574526 - MIR SINE MIR -70 192 109 209 267 244 36 chr10 6743278 6743503 -133573262 - L3 LINE CR1 -149 1428 1157 274 266 0 0 chr10 6743503 6743567 -133573198 + L1MD2 LINE L1 6218 6281 -78 481 333 24 51 chr10 6743567 6743900 -133572865 - L3 LINE CR1 -427 1150 827 1427 203 49 7 chr10 6743919 6744205 -133572560 - AluJo SINE Alu -14 298 1 803 199 197 102 chr10 6745427 6745848 -133570917 + MLT1C LTR MaLR 4 464 -3 1990 138 3 22 chr10 6746452 6746763 -133570002 - AluSx SINE Alu -7 305 1 798 130 23 23 chr10 6746797 6747277 -133569488 + (TCCA)n Simple_repeat Simple_repeat 1 480 0 2092 134 0 0 chr10 6748694 6748992 -133567773 + AluSx SINE Alu 1 298 -14 289 312 98 17 chr10 6749171 6749344 -133567421 + L3b LINE CR1 1287 1473 -110 2125 126 7 0 chr10 6750417 6750719 -133566046 - AluSx SINE Alu -8 304 1 396 232 145 7 chr10 6752876 6753014 -133563751 + MIR SINE MIR 47 203 -59 1010 87 0 6 chr10 6753268 6753429 -133563336 + (GA)n Simple_repeat Simple_repeat 1 160 0 277 219 68 14 chr10 6753659 6753732 -133563033 + MIR SINE MIR 68 144 -64 700 192 8 0 chr10 6753900 6754020 -133562745 + FLAM_A SINE Alu 4 124 -9 243 270 0 0 chr10 6754925 6754988 -133561777 + MIR SINE MIR 180 242 -20 532 296 44 52 chr10 6755071 6755321 -133561444 - MER115 DNA AcHobo -1 692 445 262 286 169 0 chr10 6755318 6755395 -133561370 - MER115 DNA AcHobo -426 267 178 * 311 275 11 0 chr10 6755656 6755747 -133561018 + MIR3 SINE MIR 109 200 -8 574 164 27 0 chr10 6755800 6755910 -133560855 + L1MC1 LINE L1 5792 5904 -429 1930 114 88 0 chr10 6756640 6756913 -133559852 + AluSx SINE Alu 1 297 -15 2223 108 3 32 chr10 6757432 6757772 -133558993 + AluSx SINE Alu 1 312 0 2503 76 0 0 chr10 6757998 6758302 -133558463 + AluY SINE Alu 1 304 -7 1512 228 198 92 chr10 6758476 6758678 -133558087 + LTR24B LTR ERV1 1 180 -455 2179 114 7 3 chr10 6758678 6758984 -133557781 - AluSq SINE Alu -6 307 1 1512 228 198 92 chr10 6758984 6759356 -133557409 + LTR24B LTR ERV1 180 635 0 1061 24 87 0 chr10 6762009 6762136 -133554629 - MER85 DNA T2_type -1 138 1 336 303 30 0 chr10 6762559 6762691 -133554074 - L1ME LINE L1 -297 5824 5689 252 323 152 0 chr10 6763217 6763316 -133553449 + L2 LINE L2 3144 3257 -15 2449 89 0 0 chr10 6763557 6763886 -133552879 + AluSx SINE Alu 1 312 0 298 242 156 8 chr10 6764237 6764365 -133552400 + L1ME4a LINE L1 5975 6121 0 2075 102 3 71 chr10 6765619 6765941 -133550824 + AluSx SINE Alu 1 300 -12 256 316 88 20 chr10 6766468 6766639 -133550126 + MIR SINE MIR 23 202 -60 243 239 14 28 chr10 6767943 6768014 -133548751 + CT-rich Low_complexity Low_complexity 2 71 0 961 167 80 0 chr10 6768124 6768286 -133548479 + MLT1B LTR MaLR 3 177 -213 591 218 24 0 chr10 6768289 6768413 -133548352 + FLAM_A SINE Alu 1 127 -15 971 208 9 28 chr10 6768418 6768612 -133548153 + MLT1B LTR MaLR 179 370 -20 2470 120 25 6 chr10 6768612 6768969 -133547796 - THE1B LTR MaLR 0 364 1 971 208 9 28 chr10 6768969 6768990 -133547775 + MLT1B LTR MaLR 370 390 0 1747 170 3 7 chr10 6770103 6770403 -133546362 + AluSx SINE Alu 1 299 -13 456 216 32 64 chr10 6771757 6771882 -133544883 - MER91C DNA MER1_type -19 121 1 2379 91 0 0 chr10 6772330 6772638 -133544127 - AluY SINE Alu -3 308 1 228 272 39 29 chr10 6774130 6774233 -133542532 - MIR SINE MIR -50 212 109 195 139 0 0 chr10 6774698 6774734 -133542031 + (ATG)n Simple_repeat Simple_repeat 3 38 0 246 62 0 0 chr10 6775304 6775336 -133541429 + (TA)n Simple_repeat Simple_repeat 1 32 0 1593 167 15 11 chr10 6775689 6775953 -133540812 - AluJo SINE Alu -47 265 1 318 50 0 0 chr10 6776760 6776800 -133539965 + (CTATT)n Simple_repeat Simple_repeat 4 43 0 1688 160 0 80 chr10 6776806 6777119 -133539646 - AluJo SINE Alu -24 288 1 1826 161 0 55 chr10 6777120 6777450 -133539315 - AluSx SINE Alu 0 312 1 658 259 93 22 chr10 6777999 6778277 -133538488 - L1M4 LINE L1 -2147 3999 3702 1768 133 19 70 chr10 6778616 6778744 -133538021 + AluJb SINE Alu 1 134 -178 2329 57 4 0 chr10 6778744 6779024 -133537741 + AluY SINE Alu 1 281 -30 1768 133 19 70 chr10 6779024 6779211 -133537554 + AluJb SINE Alu 134 300 -12 239 218 119 50 chr10 6779503 6779604 -133537161 + MIR SINE MIR 72 179 -83 22 35 0 0 chr10 6779791 6779820 -133536945 + AT_rich Low_complexity Low_complexity 1 29 0 959 90 0 7 chr10 6779829 6779974 -133536791 + (TCTA)n Simple_repeat Simple_repeat 1 144 0 242 36 0 0 chr10 6779987 6780015 -133536750 + (A)n Simple_repeat Simple_repeat 1 28 0 235 198 28 38 chr10 6782877 6782983 -133533782 + GA-rich Low_complexity Low_complexity 4 108 0 2422 81 0 0 chr10 6783145 6783442 -133533323 - AluSg SINE Alu -13 297 1 204 97 0 0 chr10 6784070 6784101 -133532664 + (A)n Simple_repeat Simple_repeat 1 31 0 2733 232 58 8 chr10 6784321 6785474 -133531291 - L1ME LINE L1 -392 6052 4843 548 208 87 11 chr10 6785482 6785672 -133531093 - L1MDa LINE L1 -4755 1671 1357 22 0 0 0 chr10 6785728 6785750 -133531015 + AT_rich Low_complexity Low_complexity 1 22 0 1178 87 6 0 chr10 6786059 6786232 -133530533 + (TCTCC)n Simple_repeat Simple_repeat 2 175 0 216 0 0 0 chr10 6787089 6787113 -133529652 + (TG)n Simple_repeat Simple_repeat 1 24 0 1078 246 54 81 chr10 6788642 6789175 -133527590 - MER34 LTR ERV1 -23 519 1 1500 218 89 17 chr10 6790491 6790839 -133525926 + MLT1A2 LTR MaLR 1 373 -1 882 207 0 17 chr10 6790871 6791045 -133525720 + FRAM SINE Alu 1 170 -6 911 150 0 0 chr10 6791413 6791533 -133525232 + AluSq/x SINE Alu 1 123 -190 243 0 0 0 chr10 6791533 6791560 -133525205 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 911 150 0 0 chr10 6791560 6791572 -133525193 + AluSq/x SINE Alu 122 133 -180 1939 150 31 0 chr10 6792057 6792351 -133524414 - AluSx SINE Alu -9 303 1 623 225 0 47 chr10 6792379 6792508 -133524257 - FLAM_A SINE Alu -10 123 1 40 37 0 0 chr10 6793098 6793152 -133523613 + AT_rich Low_complexity Low_complexity 1 54 0 2458 54 0 7 chr10 6793267 6793563 -133523202 - AluY SINE Alu -17 294 1 187 349 58 41 chr10 6793606 6793778 -133522987 - MIR SINE MIR -56 206 32 339 345 22 36 chr10 6793807 6793946 -133522819 + MIR SINE MIR 5 141 -121 1971 208 84 2 chr10 6793998 6794440 -133522325 - MER70B LTR ERVL -100 478 1 222 203 47 47 chr10 6795593 6795657 -133521108 + MIR SINE MIR 199 262 0 1555 218 49 16 chr10 6796701 6797068 -133519697 - MLT1B LTR MaLR 0 390 12 414 267 75 43 chr10 6797073 6797241 -133519524 + MLT1I LTR MaLR 14 190 -219 2087 127 73 17 chr10 6797241 6797596 -133519169 + THE1C LTR MaLR 1 375 0 414 267 75 43 chr10 6797596 6797614 -133519151 + MLT1I LTR MaLR 190 206 -203 2171 96 0 17 chr10 6797630 6797921 -133518844 + AluSx SINE Alu 1 286 -26 318 26 0 0 chr10 6797924 6797963 -133518802 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 232 241 84 0 chr10 6798018 6798101 -133518664 + LTR66 LTR ERVL 352 441 -169 808 95 9 0 chr10 6798151 6798256 -133518509 - AluSg/x SINE Alu -17 295 190 7624 54 2 2 chr10 6798399 6799545 -133517220 + L1PA5 LINE L1 5008 6154 0 225 323 0 0 chr10 6800482 6800544 -133516221 + MIR3 SINE MIR 119 180 -28 11206 87 18 39 chr10 6800759 6803090 -133513675 - HERVH LTR ERV1 -5552 2161 1 3585 67 5 7 chr10 6803092 6803541 -133513224 - LTR7 LTR ERV1 -2 448 1 1011 265 75 131 chr10 6804225 6805150 -133511615 + Charlie2b DNA MER1_type 45 917 -1865 838 258 116 7 chr10 6805152 6805427 -133511338 - MLT1E3 LTR MaLR -3 621 317 622 60 66 18 chr10 6806242 6806409 -133510356 + (TA)n Simple_repeat Simple_repeat 1 175 0 632 222 146 0 chr10 6807214 6807385 -133509380 + MER3 DNA MER1_type 14 209 0 382 318 117 25 chr10 6808809 6809048 -133507717 + MIR SINE MIR 1 261 -1 959 178 6 6 chr10 6809106 6809286 -133507479 - L1MA9 LINE L1 0 6312 6133 375 123 14 0 chr10 6809293 6809366 -133507399 + L1MDa LINE L1 1258 1331 -5209 309 214 17 79 chr10 6809350 6809469 -133507296 + L1MA1 LINE L1 4262 4375 -1771 * 379 252 52 0 chr10 6811431 6811546 -133505219 + L1MA1 LINE L1 5817 5937 -365 * 961 51 0 0 chr10 6811464 6811581 -133505184 + L1PB1 LINE L1 5856 5972 -179 7104 59 15 27 chr10 6811583 6812278 -133504487 + L1PA6 LINE L1 4774 5476 -678 2207 115 0 3 chr10 6812278 6812582 -133504183 + AluY SINE Alu 1 303 -8 7104 59 15 27 chr10 6812582 6812899 -133503866 + L1PA6 LINE L1 5476 5795 -359 2358 89 0 22 chr10 6812899 6813215 -133503550 + AluY SINE Alu 1 309 -2 7104 59 15 27 chr10 6813215 6813592 -133503173 + L1PA6 LINE L1 5795 6153 -1 303 239 44 44 chr10 6813899 6814012 -133502753 - MER103 DNA DNA -13 153 41 268 156 0 0 chr10 6814275 6814320 -133502445 + L1ME2 LINE L1 6015 6059 -105 392 274 0 9 chr10 6814357 6814463 -133502302 + L1ME2 LINE L1 6041 6145 -19 256 382 8 24 chr10 6814506 6814629 -133502136 - MIR SINE MIR -68 140 20 2361 87 3 3 chr10 6815664 6815973 -133500792 + AluSg SINE Alu 1 309 -1 1170 112 0 0 chr10 6816288 6816310 -133500455 + (TTCC)n Simple_repeat Simple_repeat 1 200 0 1170 112 0 0 chr10 6816310 6816488 -133500277 + (TTCC)n Simple_repeat Simple_repeat 1 178 0 456 217 19 0 chr10 6816838 6816944 -133499821 - MLT2D LTR ERVL -274 140 33 198 71 0 0 chr10 6817236 6817264 -133499501 + (T)n Simple_repeat Simple_repeat 1 28 0 2833 80 16 11 chr10 6818321 6818694 -133498071 - THE1C LTR MaLR 0 375 1 400 318 155 0 chr10 6818808 6818956 -133497809 - MER5A DNA MER1_type -6 183 13 291 327 158 0 chr10 6819244 6819409 -133497356 - MIR3 SINE MIR -6 202 12 2145 273 73 28 chr10 6820103 6820879 -133495886 + MER63C DNA MER1_type 1 811 -119 326 300 53 53 chr10 6820979 6821206 -133495559 - HAL1b LINE L1 -1061 287 61 575 286 12 30 chr10 6821792 6821960 -133494805 + MLT1F1 LTR MaLR 3 167 -375 857 229 74 44 chr10 6822053 6822404 -133494361 + MLT1F1 LTR MaLR 146 565 -2 2166 154 25 57 chr10 6822627 6822648 -133494117 - MLT1B LTR MaLR 0 390 370 2610 176 24 0 chr10 6822648 6823064 -133493701 + MSTB LTR MaLR 1 426 0 2166 154 25 57 chr10 6823064 6823445 -133493320 - MLT1B LTR MaLR -20 370 1 303 309 111 18 chr10 6824234 6824391 -133492374 - MIR3 SINE MIR -34 174 4 261 306 10 31 chr10 6824663 6824761 -133492004 - MIR3 SINE MIR -9 199 104 246 128 0 0 chr10 6825224 6825263 -133491502 + (TTC)n Simple_repeat Simple_repeat 2 40 0 1858 132 0 0 chr10 6825265 6825516 -133491249 - AluSx SINE Alu -61 251 1 1114 60 13 40 chr10 6826325 6826474 -133490291 - L1PA11 LINE L1 -3 6171 6027 225 0 0 0 chr10 6826482 6826507 -133490258 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1977 138 0 0 chr10 6826509 6826792 -133489973 - AluSq SINE Alu -30 283 1 216 289 70 51 chr10 6826815 6826971 -133489794 - MIR SINE MIR -45 217 59 384 40 0 0 chr10 6827980 6828030 -133488735 + (TG)n Simple_repeat Simple_repeat 2 51 0 771 231 129 0 chr10 6828817 6829003 -133487762 + MER58A DNA MER1_type 4 213 -11 1755 163 3 33 chr10 6829217 6829517 -133487248 - AluSx SINE Alu -17 295 5 3265 182 63 6 chr10 6829609 6830240 -133486525 - LTR65 LTR ERV1 0 669 3 896 119 0 22 chr10 6830705 6830839 -133485926 - L1PB4 LINE L1 0 6156 6026 3038 158 37 27 chr10 6830839 6831401 -133485364 - MER41B LTR ERV1 0 635 68 445 290 57 36 chr10 6831573 6831766 -133484999 - L2 LINE L2 -854 2460 2264 297 303 49 0 chr10 6831752 6831874 -133484891 - L2 LINE L2 -1198 2116 1989 * 4622 173 46 20 chr10 6831876 6833243 -133483522 + L1MB8 LINE L1 4768 6176 -2 2097 134 47 33 chr10 6833761 6834120 -133482645 + THE1B LTR MaLR 1 364 0 4548 108 14 47 chr10 6834550 6835293 -133481472 - L1PB1 LINE L1 -2 6149 5432 6683 223 68 103 chr10 6835295 6836788 -133479977 + Charlie6 DNA MER1_type 83 1628 -1872 511 270 0 0 chr10 6836788 6836903 -133479862 + FLAM_A SINE Alu 2 116 -17 2289 56 3 0 chr10 6836903 6837188 -133479577 - L1PA5 LINE L1 0 6154 5869 1381 138 0 0 chr10 6837193 6837396 -133479369 + AluSg/x SINE Alu 103 305 -5 6683 223 68 103 chr10 6837396 6838222 -133478543 + Charlie6 DNA MER1_type 1631 2521 -979 2681 188 70 4 chr10 6838284 6838799 -133477966 + MER21A LTR ERV1 383 931 0 2396 82 0 3 chr10 6838881 6839184 -133477581 + AluSx SINE Alu 1 302 -10 233 121 0 0 chr10 6839184 6839217 -133477548 - MER41C LTR ERV1 -521 33 1 310 161 118 21 chr10 6839217 6839310 -133477455 - L1PB4 LINE L1 -127 6029 5928 2581 122 0 3 chr10 6839724 6840076 -133476689 - THE1B LTR MaLR 0 364 14 383 143 16 0 chr10 6840064 6840127 -133476638 - THE1B LTR MaLR -300 64 1 * 617 211 44 3 chr10 6841512 6841681 -133475084 - MER69A DNA AcHobo 0 177 4 207 69 0 0 chr10 6841747 6841776 -133474989 + (TG)n Simple_repeat Simple_repeat 1 29 0 1589 192 25 6 chr10 6841830 6842147 -133474618 + MLT1A1 LTR MaLR 1 323 -42 2344 96 60 16 chr10 6842703 6842723 -133474042 + L1PB1 LINE L1 5761 5779 -385 189 0 0 0 chr10 6842723 6842744 -133474021 + (TA)n Simple_repeat Simple_repeat 1 21 0 2344 96 60 16 chr10 6842744 6843111 -133473654 + L1PB1 LINE L1 5779 6164 0 398 151 27 0 chr10 6843548 6843621 -133473144 - MER116 DNA Mariner 0 80 6 1875 118 63 76 chr10 6843641 6844021 -133472744 + THE1C LTR MaLR 1 375 0 1943 158 25 14 chr10 6844596 6844964 -133471801 - L1MB3 LINE L1 -2 6181 5810 2160 144 0 0 chr10 6845018 6845324 -133471441 + AluSx SINE Alu 1 306 -6 311 322 41 0 chr10 6845994 6846115 -133470650 - L2 LINE L2 -1 3271 3146 191 317 40 69 chr10 6846860 6847062 -133469703 - L2 LINE L2 -179 3093 2898 236 234 0 0 chr10 6847845 6847892 -133468873 + L1ME4a LINE L1 5986 6032 -89 1378 252 13 10 chr10 6849606 6850068 -133466697 - MER90 LTR ERV1 -6 569 57 2056 130 0 7 chr10 6850225 6850538 -133466227 + AluSx SINE Alu 1 311 0 2217 160 61 11 chr10 6850704 6851149 -133465616 - L1MA7 LINE L1 0 6291 5825 340 174 138 87 chr10 6851632 6851770 -133464995 - L1ME4a LINE L1 0 6121 5977 2073 121 4 0 chr10 6852504 6852803 -133463962 + AluSq SINE Alu 11 313 0 309 167 13 77 chr10 6853695 6853773 -133462992 + MER5A DNA MER1_type 69 141 -48 3965 164 39 1 chr10 6853799 6854495 -133462270 - L1PA16 LINE L1 -9 6157 5436 262 309 24 0 chr10 6855218 6855302 -133461463 - MIR SINE MIR -116 146 61 1060 113 0 7 chr10 6855731 6855882 -133460883 + FRAM SINE Alu 19 168 -8 181 194 104 0 chr10 6855986 6856053 -133460712 - MIR SINE MIR -133 129 56 439 219 75 78 chr10 6856222 6856613 -133460152 + MLT1H LTR MaLR 23 533 -16 2017 101 25 7 chr10 6858342 6858663 -133458102 + AluSq SINE Alu 1 326 0 341 344 81 18 chr10 6860873 6861094 -133455671 - MIR SINE MIR -2 260 26 1650 167 0 0 chr10 6861154 6861425 -133455340 - AluJo SINE Alu 0 306 36 1276 220 179 27 chr10 6861453 6861866 -133454899 - MER50 LTR ERV1 -19 715 240 284 264 195 0 chr10 6862600 6862687 -133454078 - MER50 LTR ERV1 -614 120 17 256 154 0 0 chr10 6863056 6863095 -133453670 + U2 snRNA snRNA 1 39 -149 418 284 16 0 chr10 6864080 6864207 -133452558 + MIR SINE MIR 47 175 -87 1197 104 12 0 chr10 6864611 6864775 -133451990 + AluSg/x SINE Alu 132 297 -13 2349 144 50 28 chr10 6864969 6865427 -133451338 - L1MB3 LINE L1 0 6183 5716 818 179 174 5 chr10 6865885 6866069 -133450696 - MER20 DNA MER1_type 0 219 5 3959 173 29 11 chr10 6866346 6866668 -133450097 + MER72 LTR ERV1 9 324 -398 2583 97 14 0 chr10 6866668 6867018 -133449747 + THE1A LTR MaLR 1 355 0 3959 173 29 11 chr10 6867018 6867396 -133449369 + MER72 LTR ERV1 324 721 -1 1891 250 65 55 chr10 6867413 6868101 -133448664 - MER21B LTR ERV1 -109 754 60 383 256 0 0 chr10 6868111 6868189 -133448576 - MER21B LTR ERV1 -765 98 21 273 77 0 0 chr10 6868289 6868328 -133448437 + AluSc SINE Alu 255 293 -6 256 241 84 36 chr10 6868321 6868404 -133448361 + Charlie6 DNA MER1_type 3035 3121 -379 * 2194 88 7 0 chr10 6868662 6868936 -133447829 - AluSg SINE Alu -11 299 24 189 281 41 77 chr10 6869405 6869601 -133447164 - L2 LINE L2 -2178 1136 948 1544 189 49 11 chr10 6870016 6870366 -133446399 + MER110A LTR ERV1 55 417 -51 474 277 113 39 chr10 6870445 6870676 -133446089 - MIR SINE MIR -8 254 7 287 260 0 0 chr10 6871643 6871716 -133445049 - MLT1L LTR MaLR -4 611 539 3201 142 41 42 chr10 6871973 6872585 -133444180 - LTR36 LTR ERV1 0 611 1 474 143 65 0 chr10 6872592 6872669 -133444096 + MER31B LTR ERV1 1 82 -384 342 319 43 7 chr10 6872744 6872882 -133443883 - MER87 LTR ERV1 0 541 399 1925 186 44 42 chr10 6873191 6873620 -133443145 + MER67A LTR ERV1 101 530 -13 898 212 103 75 chr10 6873723 6874059 -133442706 - LTR35 LTR ERV1 0 679 188 1320 233 94 8 chr10 6874716 6875098 -133441667 - MER90 LTR ERV1 -2 612 198 35 0 0 0 chr10 6875102 6875137 -133441628 + AT_rich Low_complexity Low_complexity 1 35 0 406 277 18 24 chr10 6875203 6875369 -133441396 - MER90 LTR ERV1 -407 168 4 408 274 49 60 chr10 6875490 6875775 -133440990 - L2 LINE L2 0 3313 3032 2207 125 0 0 chr10 6876262 6876549 -133440216 - AluSx SINE Alu -22 290 4 255 254 0 0 chr10 6877137 6877200 -133439565 - L3 LINE CR1 -124 1453 1391 279 191 0 0 chr10 6877200 6877268 -133439497 + (TG)n Simple_repeat Simple_repeat 1 68 0 2217 135 0 0 chr10 6877439 6877751 -133439014 - AluSx SINE Alu 0 312 1 459 0 0 0 chr10 6877873 6877924 -133438841 + (TA)n Simple_repeat Simple_repeat 2 52 0 211 287 82 25 chr10 6878176 6878298 -133438467 + MIR SINE MIR 134 262 0 3614 49 0 7 chr10 6878779 6879230 -133437535 - LTR7 LTR ERV1 -2 448 1 2564 76 45 13 chr10 6879230 6879610 -133437155 - HERVH LTR ERV1 0 7713 7322 1454 125 19 0 chr10 6879608 6879824 -133436941 - HERVH LTR ERV1 -1894 5819 5600 * 4409 143 1 1 chr10 6879825 6880487 -133436278 - HERVH LTR ERV1 -2564 5149 4488 3303 117 8 10 chr10 6880489 6880992 -133435773 - HERVH LTR ERV1 -3720 3993 3492 948 133 7 0 chr10 6880982 6881132 -133435633 - HERVH LTR ERV1 -4423 3290 3140 * 5360 90 0 18 chr10 6881111 6881880 -133434885 - HERVH LTR ERV1 -4718 2995 2241 262 280 206 0 chr10 6882502 6882609 -133434156 + MIR SINE MIR 70 198 -64 253 262 12 0 chr10 6883522 6883606 -133433159 + (CAGAGA)n Simple_repeat Simple_repeat 3 87 0 2297 114 22 30 chr10 6883615 6883982 -133432783 - THE1B LTR MaLR 0 364 1 377 286 36 56 chr10 6885129 6885325 -133431440 + MIR3 SINE MIR 17 208 0 1864 153 7 4 chr10 6885870 6886151 -133430614 + AluJb SINE Alu 1 282 -30 194 0 39 0 chr10 6886154 6886180 -133430585 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 297 183 0 32 chr10 6886231 6886324 -133430441 + CT-rich Low_complexity Low_complexity 2 91 0 287 188 0 0 chr10 6886883 6886931 -133429834 - MLT2B1 LTR ERVL 0 520 473 428 250 0 7 chr10 6886931 6887071 -133429694 + (TG)n Simple_repeat Simple_repeat 1 139 0 1022 212 81 79 chr10 6887071 6887499 -133429266 - MLT2B1 LTR ERVL -41 410 1 24 32 0 0 chr10 6888491 6888522 -133428243 + AT_rich Low_complexity Low_complexity 1 31 0 2458 101 3 0 chr10 6889167 6889504 -133427261 - L1PB1 LINE L1 -4 6147 5810 3968 172 79 24 chr10 6890072 6890855 -133425910 - LTR1B LTR ERV1 0 826 1 237 277 107 27 chr10 6891032 6891144 -133425621 + MIR3 SINE MIR 67 187 -21 555 268 30 25 chr10 6892058 6892256 -133424509 - MIR SINE MIR -55 207 9 4446 158 94 0 chr10 6893485 6894240 -133422525 + LTR1B LTR ERV1 1 826 0 272 280 0 59 chr10 6894372 6894490 -133422275 + L2 LINE L2 3103 3213 -100 276 320 59 39 chr10 6894729 6894985 -133421780 + L1ME LINE L1 5556 5816 -305 363 233 15 79 chr10 6895205 6895356 -133421409 + MIR SINE MIR 51 192 -63 227 390 90 6 chr10 6896928 6897105 -133419660 + L2 LINE L2 3029 3220 -52 251 262 163 73 chr10 6897228 6897461 -133419304 + MLT1H LTR MaLR 97 350 -199 235 200 57 43 chr10 6897475 6897545 -133419220 + MLT1I LTR MaLR 316 386 -23 731 178 3 0 chr10 6897912 6898268 -133418497 + (TG)n Simple_repeat Simple_repeat 1 357 0 378 293 29 32 chr10 6899812 6900051 -133416714 + L1ME4a LINE L1 5668 5904 -217 1574 152 10 37 chr10 6900128 6900424 -133416341 - AluJo SINE Alu -22 290 3 34 24 0 0 chr10 6900602 6900643 -133416122 + AT_rich Low_complexity Low_complexity 1 41 0 2433 67 0 29 chr10 6900956 6901272 -133415493 + AluY SINE Alu 1 307 -4 21 36 0 0 chr10 6901412 6901440 -133415325 + AT_rich Low_complexity Low_complexity 1 28 0 2313 113 3 0 chr10 6902091 6902402 -133414363 + AluSx SINE Alu 1 312 0 1796 217 40 80 chr10 6902723 6903327 -133413438 + MLT1G LTR MaLR 11 590 0 1902 194 90 12 chr10 6904483 6904665 -133412100 + MLT1C LTR MaLR 2 168 -299 261 0 0 0 chr10 6904665 6904694 -133412071 + (CA)n Simple_repeat Simple_repeat 1 29 0 1902 194 90 12 chr10 6904694 6904943 -133411822 + MLT1C LTR MaLR 168 467 0 1527 97 60 0 chr10 6905294 6905511 -133411254 + MER30 DNA MER1_type 1 230 0 468 102 45 0 chr10 6905769 6905857 -133410908 + CT-rich Low_complexity Low_complexity 4 95 0 1248 66 0 16 chr10 6905857 6906040 -133410725 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2012 123 20 3 chr10 6906056 6906348 -133410417 - AluSx SINE Alu -15 297 1 252 59 0 0 chr10 6907496 6907530 -133409235 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 286 303 73 0 chr10 6907531 6907640 -133409125 - L2 LINE L2 -15 3298 3182 368 265 20 0 chr10 6908937 6909035 -133407730 + L2 LINE L2 3214 3313 0 2184 123 7 0 chr10 6909864 6910173 -133406592 - AluSx SINE Alu 0 312 2 2302 176 31 12 chr10 6910415 6910840 -133405925 - MSTB2 LTR MaLR 0 457 25 917 126 6 27 chr10 6911384 6911567 -133405198 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 425 133 19 29 chr10 6911576 6911681 -133405084 + GA-rich Low_complexity Low_complexity 2 105 0 252 184 0 0 chr10 6911825 6911874 -133404891 + GA-rich Low_complexity Low_complexity 4 52 0 2045 152 44 46 chr10 6912240 6912790 -133403975 + MLT2A2 LTR ERVL 1 554 0 234 0 0 0 chr10 6913776 6913802 -133402963 + (A)n Simple_repeat Simple_repeat 1 26 0 1458 40 10 25 chr10 6914072 6914274 -133402491 + HERVH LTR ERV1 7515 7713 0 3586 51 0 7 chr10 6914274 6914725 -133402040 + LTR7 LTR ERV1 1 448 -2 2635 184 59 0 chr10 6915239 6915765 -133401000 - MER74A LTR ERVL -1 557 1 303 96 0 0 chr10 6916251 6916303 -133400462 + (TTGG)n Simple_repeat Simple_repeat 4 55 0 1235 75 0 0 chr10 6916304 6916464 -133400301 - L1PA14 LINE L1 -4 6157 5998 283 189 0 54 chr10 6916468 6916542 -133400223 + C-rich Low_complexity Low_complexity 6 75 0 344 180 0 72 chr10 6916548 6916742 -133400023 + CT-rich Low_complexity Low_complexity 1 180 0 4525 106 14 105 chr10 6916874 6917758 -133399007 - HERVH LTR ERV1 -6910 803 1 3544 60 0 7 chr10 6917760 6918211 -133398554 - LTR7 LTR ERV1 -2 448 1 232 299 154 0 chr10 6918231 6918348 -133398417 - L2 LINE L2 0 3313 3179 205 306 56 0 chr10 6918902 6918974 -133397791 - MIR3 SINE MIR -48 160 85 44711 44 2 2 chr10 6919401 6925559 -133391206 - L1PA3 LINE L1 0 6155 1 300 331 174 20 chr10 6925998 6926354 -133390411 + L2 LINE L2 2201 2611 -703 213 39 0 0 chr10 6927420 6927446 -133389319 + (TTTTC)n Simple_repeat Simple_repeat 3 28 0 1824 167 3 19 chr10 6927465 6927782 -133388983 - AluJb SINE Alu 0 312 1 21 71 0 0 chr10 6929449 6929491 -133387274 + AT_rich Low_complexity Low_complexity 1 42 0 336 302 47 9 chr10 6930111 6930259 -133386506 + MIR SINE MIR 8 161 -47 181 156 0 0 chr10 6931093 6931125 -133385640 - MER5A DNA MER1_type -114 75 44 726 96 0 0 chr10 6931798 6931902 -133384863 + (T)n Simple_repeat Simple_repeat 1 104 0 2267 118 3 3 chr10 6932343 6932729 -133384036 - AluSq SINE Alu 0 386 1 288 297 77 39 chr10 6932894 6933076 -133383689 + MIR SINE MIR 20 208 -54 2058 149 0 0 chr10 6933246 6933548 -133383217 - AluSx SINE Alu -10 302 1 315 269 59 0 chr10 6934714 6934833 -133381932 - MER76 LTR ERV 0 688 563 456 216 98 26 chr10 6935325 6935519 -133381246 - MER76 LTR ERV -102 586 379 303 213 13 27 chr10 6936581 6936656 -133380109 - MER45A DNA AcHobo 0 178 105 2118 135 3 0 chr10 6936661 6936965 -133379800 + AluSx SINE Alu 1 305 -7 998 204 129 8 chr10 6936984 6937224 -133379541 + AluJo SINE Alu 13 281 -31 424 216 137 0 chr10 6937234 6937336 -133379429 - MER45A DNA AcHobo -61 117 2 1070 157 5 14 chr10 6937974 6938190 -133378575 + L1MA4 LINE L1 6084 6297 -3 2185 98 32 0 chr10 6938625 6938910 -133377855 + AluSq SINE Alu 5 298 -15 507 155 83 0 chr10 6938920 6939004 -133377761 + AluJ/FLAM SINE Alu 1 91 -221 366 287 36 24 chr10 6939402 6939569 -133377196 + MER117 DNA MER1_type 22 190 -7 270 252 6 107 chr10 6939727 6939886 -133376879 + L1ME4a LINE L1 5577 5719 -402 989 201 22 45 chr10 6939939 6940163 -133376602 - MER20 DNA MER1_type 0 219 1 2245 265 47 24 chr10 6940650 6941436 -133375329 - L1MEc LINE L1 -5554 842 39 324 292 163 25 chr10 6941437 6941677 -133375088 + L1ME4a LINE L1 5698 5970 -151 287 273 18 0 chr10 6941681 6941791 -133374974 + (TA)n Simple_repeat Simple_repeat 2 113 0 1938 113 46 0 chr10 6942016 6942299 -133374466 - AluSx SINE Alu -16 296 1 1882 31 18 0 chr10 6942780 6943007 -133373758 - L1PA3 LINE L1 0 6155 5925 518 214 11 11 chr10 6943129 6943307 -133373458 + (CA)n Simple_repeat Simple_repeat 1 178 0 298 209 18 42 chr10 6943320 6943606 -133373159 + (CA)n Simple_repeat Simple_repeat 1 279 0 1169 215 80 43 chr10 6944362 6944799 -133371966 + L1ME2 LINE L1 5698 6150 -14 577 221 124 0 chr10 6945286 6945431 -133371334 - MIR SINE MIR -42 220 58 465 290 45 0 chr10 6945535 6945690 -133371075 - MIR3 SINE MIR -31 177 16 25 31 0 0 chr10 6945695 6945727 -133371038 + AT_rich Low_complexity Low_complexity 1 32 0 314 341 39 8 chr10 6945787 6945916 -133370849 - L3b LINE CR1 -6 1577 1445 875 266 63 47 chr10 6947548 6948209 -133368556 + L1M4 LINE L1 4037 4708 -1438 210 309 0 59 chr10 6948327 6948395 -133368370 + L2 LINE L2 3202 3265 -7 263 268 28 0 chr10 6949217 6949288 -133367477 - MLT1J LTR MaLR -335 176 104 241 122 92 37 chr10 6949638 6949725 -133367040 + L1ME4a LINE L1 5279 5372 -808 465 19 0 0 chr10 6950589 6950643 -133366122 + (CA)n Simple_repeat Simple_repeat 2 55 0 566 219 7 15 chr10 6950734 6950871 -133365894 - Charlie4 DNA MER1_type -2 1959 1824 227 79 26 0 chr10 6951097 6951135 -133365630 + (TC)n Simple_repeat Simple_repeat 1 39 0 457 256 50 33 chr10 6951256 6951498 -133365267 + L1ME4a LINE L1 5671 5916 -205 916 150 0 0 chr10 6952413 6952566 -133364199 + L1PA14 LINE L1 5819 5971 -190 1013 114 0 0 chr10 6952666 6952833 -133363932 - HERVH LTR ERV1 -1947 5766 5600 4019 143 9 1 chr10 6952834 6953491 -133363274 - HERVH LTR ERV1 -2564 5149 4488 2990 130 0 12 chr10 6953493 6953993 -133362772 - HERVH LTR ERV1 -3720 3993 3500 861 140 7 0 chr10 6953992 6954142 -133362623 - HERVH LTR ERV1 -4423 3290 3140 * 14192 84 11 17 chr10 6954121 6956289 -133360476 - HERVH LTR ERV1 -4718 2995 841 24 0 0 0 chr10 6956422 6956446 -133360319 + AT_rich Low_complexity Low_complexity 1 24 0 198 304 0 14 chr10 6956754 6956823 -133359942 + MIR SINE MIR 100 167 -95 7977 67 3 2 chr10 6956846 6957814 -133358951 - LTR5 LTR ERVK 0 969 1 434 63 11 168 chr10 6957814 6957909 -133358856 - SVA Other Other -450 936 857 12928 49 1 0 chr10 6957909 6959569 -133357196 - HERVK LTR ERVK -95 7148 5533 43625 43 4 3 chr10 6959814 6965341 -133351424 - HERVK LTR ERVK -1710 5533 1 7892 78 2 1 chr10 6965341 6966309 -133350456 - LTR5 LTR ERVK 0 969 1 340 125 113 12 chr10 6966693 6966773 -133349992 - MER112 DNA MER1_type -36 224 137 225 338 73 22 chr10 6967035 6967171 -133349594 + MIR SINE MIR 66 208 -54 180 0 0 0 chr10 6967206 6967226 -133349539 + (TG)n Simple_repeat Simple_repeat 1 20 0 258 195 47 47 chr10 6967444 6967613 -133349152 + (TA)n Simple_repeat Simple_repeat 2 170 0 * 564 279 0 0 chr10 6967608 6967787 -133348978 + (CATATA)n Simple_repeat Simple_repeat 2 180 0 543 283 0 0 chr10 6967759 6967939 -133348826 + (TA)n Simple_repeat Simple_repeat 1 180 0 * 279 268 0 0 chr10 6967957 6968136 -133348629 + (TA)n Simple_repeat Simple_repeat 1 179 0 466 174 48 0 chr10 6968203 6968370 -133348395 + (TA)n Simple_repeat Simple_repeat 1 175 0 257 209 44 0 chr10 6968386 6968544 -133348221 + (TA)n Simple_repeat Simple_repeat 1 165 0 415 189 28 33 chr10 6968564 6968744 -133348021 + (TA)n Simple_repeat Simple_repeat 1 179 0 471 193 17 28 chr10 6968769 6968950 -133347815 + (TA)n Simple_repeat Simple_repeat 2 180 0 249 222 22 22 chr10 6968965 6969055 -133347710 + L1MC4 LINE L1 6614 6703 -1339 664 231 17 6 chr10 6969066 6969424 -133347341 + (TA)n Simple_repeat Simple_repeat 1 362 0 374 188 44 0 chr10 6969494 6969654 -133347111 + (TA)n Simple_repeat Simple_repeat 2 168 0 564 214 0 0 chr10 6969669 6969847 -133346918 + (TA)n Simple_repeat Simple_repeat 2 179 0 312 284 0 0 chr10 6969849 6969937 -133346828 + L1MC4 LINE L1 6616 6703 -1339 239 381 102 0 chr10 6970663 6970781 -133345984 - L2 LINE L2 -5 3267 3138 242 275 0 12 chr10 6971793 6971873 -133344892 - L1M4 LINE L1 -1537 4609 4531 256 281 216 45 chr10 6971910 6972109 -133344656 + L2 LINE L2 3080 3312 -1 213 366 11 21 chr10 6973463 6973556 -133343209 + MIR SINE MIR 30 121 -87 2231 118 170 5 chr10 6974723 6975140 -133341625 + LTR19A LTR ERV1 1 486 0 384 313 154 5 chr10 6975312 6975526 -133341239 - MIR SINE MIR -2 260 15 200 320 26 13 chr10 6976501 6976579 -133340186 - MIR3 SINE MIR -23 185 107 1542 101 38 0 chr10 6977340 6977549 -133339216 + AluSq SINE Alu 91 307 -6 3577 216 102 49 chr10 6977567 6978515 -133338250 + Charlie1a DNA MER1_type 56 1097 -1664 1049 23 78 0 chr10 6978515 6978644 -133338121 + MER85 DNA T2_type 1 139 0 3577 216 102 49 chr10 6978644 6979024 -133337741 + Charlie1a DNA MER1_type 1097 1455 0 677 272 27 13 chr10 6979052 6979276 -133337489 + L2 LINE L2 3085 3311 -2 225 303 137 63 chr10 6979712 6979887 -133336878 + L3 LINE CR1 879 1066 -511 338 330 140 28 chr10 6979912 6980233 -133336532 + L3 LINE CR1 1171 1527 -50 2159 96 11 0 chr10 6980373 6980654 -133336111 - AluSp SINE Alu -29 284 1 2071 158 3 0 chr10 6981021 6981331 -133335434 - AluJb SINE Alu -1 311 1 1943 240 58 24 chr10 6981611 6982352 -133334413 + L1M4 LINE L1 4310 5075 -1071 296 230 118 31 chr10 6982410 6982574 -133334191 + L1MDa LINE L1 1798 1992 -909 370 226 9 0 chr10 6982577 6982683 -133334082 + L1M4 LINE L1 5106 5212 -934 1174 186 79 28 chr10 6982684 6982937 -133333828 - AluJo SINE Alu -46 266 1 689 88 18 9 chr10 6982939 6983052 -133333713 + Tigger3(Golem) DNA MER2_type 2766 2879 -150 22 0 0 0 chr10 6983433 6983455 -133333310 + AT_rich Low_complexity Low_complexity 1 22 0 231 200 27 13 chr10 6983934 6984009 -133332756 - L1ME4a LINE L1 -2 6119 6044 1871 129 14 0 chr10 6984616 6984896 -133331869 + AluSx SINE Alu 1 284 -28 252 0 0 0 chr10 6984896 6984924 -133331841 + (TA)n Simple_repeat Simple_repeat 2 29 0 354 259 49 63 chr10 6985754 6985897 -133330868 - MIR SINE MIR -55 207 67 2135 118 7 0 chr10 6986051 6986347 -133330418 + AluSq SINE Alu 1 298 -15 330 204 120 0 chr10 6986444 6986552 -133330213 - L1ME4a LINE L1 -41 6080 5960 2153 165 14 6 chr10 6986670 6987033 -133329732 - L1MB1 LINE L1 -4 6164 5799 432 0 0 0 chr10 6987033 6987081 -133329684 + (CA)n Simple_repeat Simple_repeat 1 48 0 2352 166 8 26 chr10 6987085 6987737 -133329028 - L1MB1 LINE L1 -503 5665 5025 629 309 4 12 chr10 6987739 6987985 -133328780 - L1ME4a LINE L1 -295 5826 5583 261 259 17 0 chr10 6989013 6989071 -133327694 - MER91A DNA MER1_type -106 90 32 205 259 94 24 chr10 6989096 6989181 -133327584 + MIR SINE MIR 1 91 -171 209 311 30 52 chr10 6989234 6989369 -133327396 + L3 LINE CR1 1298 1429 -148 354 91 0 0 chr10 6989768 6989823 -133326942 + (TG)n Simple_repeat Simple_repeat 2 56 0 225 308 13 26 chr10 6990573 6990651 -133326114 + MIR3 SINE MIR 84 160 -48 189 0 0 0 chr10 6990718 6990739 -133326026 + (TTA)n Simple_repeat Simple_repeat 2 22 0 1046 25 0 17 chr10 6990771 6990891 -133325874 - L1PA3 LINE L1 -1 6154 6037 23620 27 0 0 chr10 6990891 6994264 -133322501 + L1PA2 LINE L1 2643 6057 -98 3389 200 56 50 chr10 6994288 6995237 -133321528 - L1MC3 LINE L1 -7 7778 6824 818 197 167 78 chr10 6995485 6995940 -133320825 - MER66A LTR ERV1 -52 443 100 578 215 0 0 chr10 6996414 6996521 -133320244 - MER5A DNA MER1_type -82 107 1 287 363 108 20 chr10 6997008 6997212 -133319553 - L2 LINE L2 -1 3271 3050 2355 109 3 0 chr10 6997302 6997614 -133319151 - AluSq SINE Alu 0 313 1 184 146 21 21 chr10 6998796 6998844 -133317921 + CT-rich Low_complexity Low_complexity 3 50 0 1072 110 0 11 chr10 6999082 6999264 -133317501 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 303 175 0 0 chr10 6999268 6999325 -133317440 + CT-rich Low_complexity Low_complexity 2 58 0 298 332 133 13 chr10 7001512 7001822 -133314943 + L2 LINE L2 2798 3233 -39 2205 144 67 22 chr10 7001844 7002223 -133314542 + L1MB3 LINE L1 5739 6140 -43 2274 89 0 30 chr10 7002223 7002525 -133314240 + AluSx SINE Alu 1 293 -19 2205 144 67 22 chr10 7002525 7002562 -133314203 + L1MB3 LINE L1 6140 6174 -9 256 276 149 11 chr10 7003221 7003308 -133313457 - L2 LINE L2 -10 3262 3164 1891 115 0 14 chr10 7003706 7003985 -133312780 - AluSx SINE Alu 0 312 38 2482 138 53 19 chr10 7004370 7004783 -133311982 - MSTA LTR MaLR 0 428 2 354 237 30 46 chr10 7005038 7005169 -133311596 - MLT1K LTR MaLR -14 574 446 243 259 24 47 chr10 7005262 7005347 -133311418 - MLT1K LTR MaLR -341 247 165 187 290 43 29 chr10 7005799 7005868 -133310897 + L2 LINE L2 2970 3039 -274 364 289 79 9 chr10 7006169 7006283 -133310482 + L2 LINE L2 3192 3313 0 2076 101 17 10 chr10 7006305 7006602 -133310163 - AluSx SINE Alu -13 299 1 330 26 0 0 chr10 7007325 7007364 -133309401 + (CA)n Simple_repeat Simple_repeat 2 40 0 243 297 27 27 chr10 7007449 7007560 -133309205 - MIR SINE MIR -92 170 60 1718 164 25 0 chr10 7008473 7008753 -133308012 + AluJo SINE Alu 1 287 -25 276 53 0 0 chr10 7008755 7008793 -133307972 + (TC)n Simple_repeat Simple_repeat 1 38 0 1384 284 34 27 chr10 7008806 7009398 -133307367 - MER74B LTR ERVL -14 608 13 267 284 136 52 chr10 7010686 7010841 -133305924 - MIR3 SINE MIR -21 187 20 2182 124 7 0 chr10 7011418 7011725 -133305040 + AluSg SINE Alu 1 309 -1 345 261 0 0 chr10 7012347 7012435 -133304330 - L2 LINE L2 -1 3312 3225 1758 159 24 7 chr10 7013206 7013496 -133303269 - AluJb SINE Alu -17 295 1 208 336 133 9 chr10 7013794 7013907 -133302858 + MIR SINE MIR 26 152 -110 2093 100 24 0 chr10 7014578 7014867 -133301898 + AluY SINE Alu 1 296 -15 2459 196 30 2 chr10 7015718 7015829 -133300936 + LOR1a LTR ERV1 1 107 -390 2287 123 0 0 chr10 7015829 7016137 -133300628 - AluSx SINE Alu -4 308 1 2459 196 30 2 chr10 7016137 7016500 -133300265 + LOR1a LTR ERV1 107 488 -9 237 232 29 43 chr10 7017070 7017139 -133299626 + MER5B DNA MER1_type 1 68 -110 675 236 133 5 chr10 7017144 7017339 -133299426 + L1M4 LINE L1 4716 4935 -1211 257 318 40 103 chr10 7017691 7017842 -133298923 + MIR SINE MIR 54 188 -74 2145 137 0 0 chr10 7017842 7018149 -133298616 - AluSx SINE Alu -5 307 1 257 318 40 103 chr10 7018149 7018220 -133298545 + MIR SINE MIR 188 262 0 214 365 14 73 chr10 7018436 7018608 -133298157 + MIR SINE MIR 31 189 -73 2450 145 0 0 chr10 7018608 7018945 -133297820 + MER1B DNA MER1_type 1 337 0 214 365 14 73 chr10 7018945 7018991 -133297774 + MIR SINE MIR 189 236 -26 1590 129 22 0 chr10 7019125 7019350 -133297415 - MER30 DNA MER1_type 0 230 1 197 300 67 11 chr10 7019350 7019434 -133297331 - MIR3 SINE MIR -12 196 108 39 84 0 0 chr10 7019894 7019989 -133296776 + AT_rich Low_complexity Low_complexity 1 95 0 203 295 168 32 chr10 7020132 7020227 -133296538 + MIR SINE MIR 37 144 -64 217 269 281 44 chr10 7021141 7021301 -133295464 - MIR3 SINE MIR -5 203 6 813 210 0 31 chr10 7021322 7021484 -133295281 + AluJo SINE Alu 126 282 -30 24 0 0 0 chr10 7021484 7021508 -133295257 + AT_rich Low_complexity Low_complexity 1 24 0 271 218 0 0 chr10 7021607 7021662 -133295103 - L1MC4 LINE L1 -1 8041 7987 1014 254 196 42 chr10 7021664 7022234 -133294531 - L1MC4 LINE L1 -144 7898 7241 1194 240 80 27 chr10 7022239 7022717 -133294048 - L1MC4 LINE L1 -810 7083 6500 295 178 14 14 chr10 7022725 7022798 -133293967 + CT-rich Low_complexity Low_complexity 3 75 0 357 240 7 32 chr10 7022798 7022908 -133293857 - L1MC4 LINE L1 -1454 6549 6431 827 204 4 116 chr10 7023714 7023963 -133292802 - MLT1B LTR MaLR -2 388 168 405 193 148 0 chr10 7023963 7024051 -133292714 + LOR1b LTR ERV1 1 101 -360 766 256 9 9 chr10 7024060 7024271 -133292494 + L1PBa LINE L1 6 216 -6647 * 2323 156 8 18 chr10 7024248 7024679 -133292086 + L1PBa LINE L1 1392 1902 -4960 180 0 0 0 chr10 7025418 7025438 -133291327 + (T)n Simple_repeat Simple_repeat 1 20 0 304 21 0 62 chr10 7025627 7025675 -133291090 - FLAM_A SINE Alu 0 133 89 886 165 0 0 chr10 7025691 7025824 -133290941 - FLAM_C SINE Alu 0 133 1 325 220 92 18 chr10 7026372 7026481 -133290284 - MER91A DNA MER1_type -25 171 55 200 196 0 18 chr10 7026948 7027004 -133289761 + GA-rich Low_complexity Low_complexity 2 56 0 463 287 0 0 chr10 7027022 7027130 -133289635 + MER34 LTR ERV1 1 108 -434 * 750 267 40 63 chr10 7027112 7027638 -133289127 + MER34 LTR ERV1 34 540 -2 515 272 44 81 chr10 7028235 7028269 -133288496 + MIR SINE MIR 1 35 -227 2175 129 3 3 chr10 7028269 7028580 -133288185 + AluSq SINE Alu 1 311 -2 515 272 44 81 chr10 7028580 7028735 -133288030 + MIR SINE MIR 35 180 -82 1911 151 7 7 chr10 7028735 7029033 -133287732 + AluJo SINE Alu 7 304 -8 515 272 44 81 chr10 7029033 7029114 -133287651 + MIR SINE MIR 180 262 0 2159 115 0 38 chr10 7029275 7029589 -133287176 + AluSx SINE Alu 1 302 -10 963 53 38 0 chr10 7029833 7029965 -133286800 - AluSc SINE Alu -172 137 1 681 146 18 9 chr10 7030781 7030891 -133285874 + MSTB LTR MaLR 2 112 -314 1839 73 146 137 chr10 7030895 7031453 -133285312 - LTR12 LTR ERV1 0 714 5 1639 195 26 3 chr10 7031453 7031755 -133285010 + MSTB LTR MaLR 118 426 0 2643 159 33 7 chr10 7031755 7032208 -133284557 - Tigger5 DNA MER2_type -24 2299 1835 1048 186 68 41 chr10 7032200 7032420 -133284345 - Tigger5 DNA MER2_type -2097 226 1 * 1452 190 93 22 chr10 7032426 7032747 -133284018 - MER2 DNA MER2_type 0 344 1 281 301 36 12 chr10 7032942 7033025 -133283740 + L2 LINE L2 2989 3073 -199 201 74 0 0 chr10 7033235 7033262 -133283503 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 1600 161 169 21 chr10 7033327 7033699 -133283066 + MSTC LTR MaLR 2 428 0 282 29 0 0 chr10 7034187 7034222 -133282543 + (GA)n Simple_repeat Simple_repeat 2 36 0 584 234 51 13 chr10 7034592 7034750 -133282015 + MER5B DNA MER1_type 1 164 -14 411 259 20 26 chr10 7034819 7034967 -133281798 + MER21B LTR ERV1 17 197 -408 1400 296 54 51 chr10 7035025 7035617 -133281148 + MER21B LTR ERV1 159 752 -111 874 166 13 26 chr10 7035630 7035781 -133280984 - MER63 DNA MER1_type -282 780 6 949 192 0 0 chr10 7036702 7036853 -133279912 + FRAM SINE Alu 4 154 -12 201 74 0 0 chr10 7036911 7036938 -133279827 + (CA)n Simple_repeat Simple_repeat 2 28 0 901 228 67 0 chr10 7037122 7037315 -133279450 + MER3 DNA MER1_type 4 209 0 2254 180 5 18 chr10 7037376 7037770 -133278995 - MLT1B LTR MaLR -1 389 1 2167 130 0 0 chr10 7038210 7038510 -133278255 - AluSx SINE Alu -12 300 1 256 227 27 40 chr10 7038813 7038888 -133277877 + MIR SINE MIR 189 262 0 828 131 28 7 chr10 7039122 7039267 -133277498 + AluSc SINE Alu 154 301 -8 256 310 207 19 chr10 7039387 7039600 -133277165 + MIR SINE MIR 1 253 -9 967 229 128 81 chr10 7040230 7040737 -133276028 - MER34B LTR ERV1 0 565 35 836 189 78 0 chr10 7040755 7040908 -133275857 - MER58A DNA MER1_type -34 190 26 21 36 0 0 chr10 7040990 7041018 -133275747 + AT_rich Low_complexity Low_complexity 1 28 0 441 322 46 66 chr10 7041261 7041678 -133275087 + L2 LINE L2 2196 2681 -633 1908 173 0 3 chr10 7041678 7041991 -133274774 + AluJb SINE Alu 1 312 0 441 322 46 66 chr10 7041991 7042062 -133274703 + L2 LINE L2 2681 2752 -562 6197 17 6 0 chr10 7042062 7043208 -133273557 + L1PA3 LINE L1 4812 5961 -194 664 53 0 0 chr10 7043309 7043384 -133273381 - AluY SINE Alu -234 84 10 690 198 52 66 chr10 7043384 7043596 -133273169 - MER39 LTR ERV1 -106 601 393 646 164 68 41 chr10 7045214 7045265 -133271500 - MER39 LTR ERV1 0 707 659 2684 163 19 0 chr10 7045265 7045683 -133271082 + MSTB LTR MaLR 1 426 0 646 164 68 41 chr10 7045683 7045777 -133270988 - MER39 LTR ERV1 -48 659 558 463 321 77 47 chr10 7046014 7046756 -133270009 - L1M4 LINE L1 -1699 4447 3684 354 295 75 15 chr10 7046866 7047066 -133269699 - L1M4 LINE L1 -2806 3340 3129 534 161 200 89 chr10 7047243 7047392 -133269373 + MER3 DNA MER1_type 1 175 -34 2399 90 7 0 chr10 7047392 7047691 -133269074 + AluSc SINE Alu 1 301 -8 534 161 200 89 chr10 7047691 7047721 -133269044 + MER3 DNA MER1_type 175 200 -9 191 141 51 0 chr10 7047841 7047919 -133268846 + (TA)n Simple_repeat Simple_repeat 2 83 0 558 309 140 14 chr10 7049182 7049460 -133267305 + L3b LINE CR1 1171 1483 -100 2394 196 152 26 chr10 7049684 7050520 -133266245 - LTR28 LTR ERV1 0 1020 3 411 294 13 20 chr10 7051611 7051764 -133265001 + L1MC4a LINE L1 5791 5942 -1866 22 0 0 0 chr10 7051935 7051957 -133264808 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr10 7052021 7052044 -133264721 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2287 85 0 7 chr10 7052143 7052448 -133264317 - AluSc SINE Alu -6 303 1 2211 117 7 7 chr10 7053637 7053946 -133262819 - AluSx SINE Alu -3 309 1 222 309 47 81 chr10 7053998 7054110 -133262655 - L3 LINE CR1 -2 1575 1468 1637 202 125 46 chr10 7054110 7054590 -133262175 + MLT2B1 LTR ERVL 1 518 -2 222 309 47 81 chr10 7054590 7054626 -133262139 - L3 LINE CR1 -109 1468 1432 884 324 57 0 chr10 7054889 7055225 -133261540 + L2 LINE L2 2018 2372 -942 890 136 8 0 chr10 7055234 7055366 -133261399 + MER4A LTR ERV1 532 664 0 182 304 62 96 chr10 7055397 7055637 -133261128 + L2 LINE L2 2933 3164 -108 297 244 62 62 chr10 7056935 7057095 -133259670 - MIR SINE MIR -55 207 48 642 40 20 10 chr10 7057881 7057980 -133258785 + (TC)n Simple_repeat Simple_repeat 1 100 0 410 304 89 54 chr10 7058124 7058223 -133258542 - MIR SINE MIR 0 262 168 197 65 32 0 chr10 7058223 7058254 -133258511 + (TCTA)n Simple_repeat Simple_repeat 1 32 0 410 304 89 54 chr10 7058254 7058378 -133258387 - MIR SINE MIR -94 168 31 339 348 108 54 chr10 7059137 7059508 -133257257 - L2 LINE L2 -8 3264 2874 337 130 0 26 chr10 7059512 7059589 -133257176 + (TG)n Simple_repeat Simple_repeat 2 76 0 3687 244 64 24 chr10 7059735 7059848 -133256917 + L1ME2 LINE L1 4145 4252 -1912 1889 116 4 0 chr10 7059848 7060116 -133256649 + AluSx SINE Alu 44 312 0 3687 244 64 24 chr10 7060116 7060359 -133256406 + L1ME2 LINE L1 4252 4484 -1680 2105 142 49 27 chr10 7060359 7060725 -133256040 - THE1C LTR MaLR -1 374 1 3687 244 64 24 chr10 7060725 7062317 -133254448 + L1ME2 LINE L1 4484 6164 0 843 300 80 34 chr10 7062740 7063354 -133253411 - HAL1b LINE L1 -475 873 232 2035 114 11 0 chr10 7063403 7063840 -133252925 + AluSx SINE Alu 1 440 0 289 336 55 23 chr10 7065269 7065397 -133251368 + L2 LINE L2 3134 3265 -7 2125 138 7 0 chr10 7065447 7065751 -133251014 + AluSx SINE Alu 1 306 -6 2256 116 3 0 chr10 7065760 7066061 -133250704 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr10 7066679 7066700 -133250065 + AT_rich Low_complexity Low_complexity 1 21 0 3504 117 71 11 chr10 7067003 7067526 -133249239 + MER41C LTR ERV1 1 554 0 220 283 17 0 chr10 7067673 7067733 -133249032 + CT-rich Low_complexity Low_complexity 2 62 0 192 343 45 0 chr10 7068417 7068484 -133248281 + MIR SINE MIR 41 110 -152 5377 191 17 27 chr10 7068762 7070407 -133246358 + L1PB3 LINE L1 4177 5793 -361 198 0 0 0 chr10 7070407 7070429 -133246336 + (TA)n Simple_repeat Simple_repeat 2 23 0 5377 191 17 27 chr10 7070429 7070788 -133245977 + L1PB3 LINE L1 5793 6154 0 3204 161 49 12 chr10 7070805 7071375 -133245390 + L1MB3 LINE L1 5586 6176 -7 1354 167 42 141 chr10 7071560 7071992 -133244773 - MLT1B LTR MaLR -1 389 1 2427 118 49 26 chr10 7072351 7072553 -133244212 + L1PB2 LINE L1 5748 5944 -207 2892 91 8 6 chr10 7072553 7072916 -133243849 - THE1B LTR MaLR 0 364 1 2427 118 49 26 chr10 7072916 7073104 -133243661 + L1PB2 LINE L1 5944 6147 -4 231 315 0 0 chr10 7073525 7073598 -133243167 + (CA)n Simple_repeat Simple_repeat 2 74 0 1296 150 4 26 chr10 7074990 7075223 -133241542 + AluJb SINE Alu 85 312 0 679 226 14 2 chr10 7076192 7076403 -133240362 + MLT1C LTR MaLR 223 467 0 219 363 60 27 chr10 7076429 7076762 -133240003 - L2 LINE L2 -840 2474 2131 836 251 69 20 chr10 7077601 7078092 -133238673 + MLT1E3 LTR MaLR 60 620 -4 219 186 0 0 chr10 7078239 7078282 -133238483 - L2 LINE L2 0 3313 3271 925 193 33 47 chr10 7079816 7080028 -133236737 + AluJo SINE Alu 1 209 -103 225 439 9 0 chr10 7080125 7080239 -133236526 + L2 LINE L2 3139 3253 -19 258 281 162 12 chr10 7081354 7081521 -133235244 - L1MC/D LINE L1 -1953 5855 5664 23 0 0 0 chr10 7081791 7081814 -133234951 + AT_rich Low_complexity Low_complexity 1 23 0 615 273 24 75 chr10 7082030 7082296 -133234469 + MIR SINE MIR 5 258 -4 271 314 0 0 chr10 7083436 7083506 -133233259 - L2 LINE L2 -18 3254 3185 805 113 9 9 chr10 7083513 7083628 -133233137 - THE1B LTR MaLR -8 356 242 419 276 134 42 chr10 7083656 7084117 -133232648 - L2 LINE L2 -221 3092 2594 2124 139 0 13 chr10 7085467 7085783 -133230982 + AluSx SINE Alu 1 312 0 400 325 64 43 chr10 7085976 7086256 -133230509 - L1ME LINE L1 -408 5754 5469 1502 186 25 94 chr10 7086311 7086436 -133230329 + MLT1A1 LTR MaLR 1 133 -232 2461 126 31 20 chr10 7086436 7086794 -133229971 + THE1B LTR MaLR 1 362 -2 1502 186 25 94 chr10 7086794 7087060 -133229705 + MLT1A1 LTR MaLR 133 365 0 245 294 0 9 chr10 7087232 7087341 -133229424 - L1ME LINE L1 -2408 5400 5293 1423 197 67 54 chr10 7087563 7087934 -133228831 - MLT1B LTR MaLR 0 390 15 295 325 101 37 chr10 7089648 7089836 -133226929 - MIR SINE MIR -14 248 49 4872 227 34 12 chr10 7089845 7091435 -133225330 + L1PB1 LINE L1 4150 5794 -357 1050 53 0 0 chr10 7091435 7091568 -133225197 + (TA)n Simple_repeat Simple_repeat 2 134 0 4872 227 34 12 chr10 7091568 7091934 -133224831 + L1PB1 LINE L1 5794 6151 0 889 207 58 11 chr10 7092090 7092278 -133224487 - MER58A DNA MER1_type -15 209 13 1497 262 33 9 chr10 7093774 7094272 -133222493 - MER90 LTR ERV1 -23 591 5 1554 186 60 23 chr10 7094276 7094626 -133222139 + MER45B DNA AcHobo 678 1040 0 525 315 41 10 chr10 7095984 7096181 -133220584 - MIR SINE MIR -55 207 5 427 323 52 39 chr10 7097189 7097344 -133219421 + MIR3 SINE MIR 38 194 -14 181 250 23 0 chr10 7097469 7097513 -133219252 + MIR SINE MIR 93 137 -71 * 207 320 124 0 chr10 7097509 7097606 -133219159 - L2 LINE L2 -43 3229 3121 * 292 261 0 0 chr10 7097585 7097650 -133219115 + MIR3 SINE MIR 143 207 -1 281 296 112 20 chr10 7098453 7098605 -133218160 + MIR SINE MIR 27 192 -70 2681 121 48 10 chr10 7098649 7099061 -133217704 + MSTA LTR MaLR 1 428 0 405 123 0 0 chr10 7100743 7100808 -133215957 + (TGAA)n Simple_repeat Simple_repeat 3 67 0 266 287 40 20 chr10 7100970 7101071 -133215694 - MIR3 SINE MIR -30 178 76 1028 255 91 31 chr10 7101264 7101684 -133215081 - HsTC2 DNA Tc2 -3 1895 1275 1660 267 26 20 chr10 7101707 7102205 -133214560 - HsTC2 DNA Tc2 -1394 504 4 977 210 0 0 chr10 7102338 7102500 -133214265 - FRAM SINE Alu -3 163 2 432 272 83 30 chr10 7102541 7102710 -133214055 + MER5B DNA MER1_type 1 178 0 1363 183 31 0 chr10 7103481 7103738 -133213027 - L1MA4 LINE L1 -14 6286 6022 427 164 33 90 chr10 7103740 7103788 -133212977 + L1MA4 LINE L1 5902 5951 -349 2357 97 7 0 chr10 7103788 7104086 -133212679 + AluSx SINE Alu 2 301 -11 427 164 33 90 chr10 7104086 7104159 -133212606 + L1MA4 LINE L1 5951 6016 -284 1546 86 99 5 chr10 7104392 7104614 -133212151 - MER75B DNA T2_type 0 243 1 534 272 52 26 chr10 7105070 7105261 -133211504 + MIR SINE MIR 67 262 0 1653 128 83 4 chr10 7105860 7106125 -133210640 + AluJb SINE Alu 3 288 -24 321 118 0 0 chr10 7106200 7106251 -133210514 + (TTCC)n Simple_repeat Simple_repeat 2 52 0 4336 88 14 0 chr10 7106262 7106818 -133209947 - L1PA10 LINE L1 -4 6164 5601 280 188 0 0 chr10 7106965 7107013 -133209752 - MER75 DNA T2_type -4 510 463 821 215 48 72 chr10 7108370 7108417 -133208348 + Tigger7 DNA MER2_type 64 111 -2376 2441 79 0 0 chr10 7108417 7108721 -133208044 - AluY SINE Alu -7 304 1 821 215 48 72 chr10 7108721 7108882 -133207883 + Tigger7 DNA MER2_type 111 267 -2220 487 209 0 0 chr10 7108879 7108970 -133207795 + Tigger7 DNA MER2_type 2488 2578 -9 * 228 67 0 0 chr10 7110543 7110573 -133206192 + (T)n Simple_repeat Simple_repeat 1 30 0 1441 126 5 5 chr10 7110606 7110812 -133205953 + AluJb SINE Alu 85 290 -22 975 85 0 48 chr10 7110816 7111005 -133205760 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1752 150 0 0 chr10 7111270 7111543 -133205222 + AluJo SINE Alu 30 302 -10 1659 182 14 27 chr10 7111933 7112230 -133204535 + AluJb SINE Alu 1 293 -19 420 349 25 28 chr10 7112845 7113129 -133203636 - L1ME3A LINE L1 -221 5949 5667 364 261 35 43 chr10 7113154 7113269 -133203496 - MER5B DNA MER1_type -5 173 60 197 293 168 24 chr10 7113358 7113525 -133203240 - L2 LINE L2 -208 3064 2874 1615 205 25 47 chr10 7113528 7113614 -133203151 - Zaphod DNA AcHobo -4 4027 3941 1563 197 10 7 chr10 7113614 7113904 -133202861 + AluJo SINE Alu 1 291 -21 1615 205 25 47 chr10 7113904 7114260 -133202505 - Zaphod DNA AcHobo -90 3941 3595 864 206 71 90 chr10 7114258 7114333 -133202432 - Zaphod DNA AcHobo -3041 990 915 * 5513 32 34 2 chr10 7114333 7114959 -133201806 + SVA Other Other 741 1386 0 864 206 71 90 chr10 7114959 7115241 -133201524 - Zaphod DNA AcHobo -3116 915 642 2472 187 36 46 chr10 7115241 7115637 -133201128 - MER74A LTR ERVL -2 556 166 2092 125 3 34 chr10 7115637 7115957 -133200808 + AluSg SINE Alu 1 310 0 2472 187 36 46 chr10 7115957 7116122 -133200643 - MER74A LTR ERVL -392 166 1 864 206 71 90 chr10 7116122 7116229 -133200536 - Zaphod DNA AcHobo -3389 642 534 2010 292 82 38 chr10 7116247 7117301 -133199464 + Charlie8 DNA MER1_type 166 1265 -1152 1379 247 117 93 chr10 7117365 7118391 -133198374 + Charlie8 DNA MER1_type 1367 2417 0 282 254 85 25 chr10 7118474 7118592 -133198173 - L2 LINE L2 -2 3311 3187 309 292 124 0 chr10 7119890 7120003 -133196762 + HAL1 LINE L1 4 130 -2377 243 0 0 0 chr10 7120241 7120268 -133196497 + (T)n Simple_repeat Simple_repeat 1 27 0 1787 180 42 9 chr10 7120268 7120601 -133196164 - L1MC1 LINE L1 -13 6320 5977 1979 66 4 0 chr10 7122824 7123065 -133193700 + L1PA5 LINE L1 5913 6154 0 560 267 134 31 chr10 7123619 7124028 -133192737 + MLT1H1 LTR MaLR 1 473 -117 226 324 14 0 chr10 7124078 7124149 -133192616 + L3 LINE CR1 1307 1378 -199 1685 190 10 3 chr10 7124190 7124500 -133192265 + AluJo SINE Alu 1 312 0 251 338 105 0 chr10 7124518 7124651 -133192114 + MIR SINE MIR 56 202 -60 625 250 215 12 chr10 7125037 7125377 -133191388 + LTR16A LTR ERVL 21 429 -21 469 159 45 0 chr10 7125809 7125897 -133190868 + MER112 DNA MER1_type 138 229 -31 358 309 176 0 chr10 7126022 7126187 -133190578 + MER112 DNA MER1_type 26 219 -41 4236 87 16 12 chr10 7126902 7127754 -133189011 + L1PA8 LINE L1 4767 5614 -517 1843 82 115 4 chr10 7127754 7128014 -133188751 + L1PA8 LINE L1 5874 6172 0 378 254 49 35 chr10 7130853 7130995 -133185770 - L2 LINE L2 -19 3294 3151 217 324 27 27 chr10 7131085 7131233 -133185532 - L2 LINE L2 -126 3187 3040 7955 105 12 24 chr10 7131242 7132392 -133184373 + HSMAR1 DNA Mariner 1 1136 -151 1503 118 9 0 chr10 7132493 7132713 -133184052 + HSMAR1 DNA Mariner 1061 1282 -5 2077 281 63 23 chr10 7132716 7133270 -133183495 - L2 LINE L2 -286 3027 2332 1775 181 66 15 chr10 7133270 7133305 -133183460 - MLT2D LTR ERVL -2 412 380 333 0 0 0 chr10 7133305 7133342 -133183423 + (TG)n Simple_repeat Simple_repeat 2 38 0 1775 181 66 15 chr10 7133342 7133698 -133183067 - MLT2D LTR ERVL -34 380 1 2077 281 63 23 chr10 7133698 7133999 -133182766 - L2 LINE L2 -981 2332 2044 916 225 90 5 chr10 7134645 7134845 -133181920 - MER58A DNA MER1_type -6 218 2 29 0 0 0 chr10 7135831 7135860 -133180905 + AT_rich Low_complexity Low_complexity 1 29 0 426 249 109 15 chr10 7136288 7136450 -133180315 - MIR SINE MIR -51 211 32 403 307 107 19 chr10 7137065 7137270 -133179495 - MIR SINE MIR -5 257 35 282 73 0 0 chr10 7138125 7138166 -133178599 + (CA)n Simple_repeat Simple_repeat 1 41 0 741 244 25 6 chr10 7138222 7138382 -133178383 + MER63A DNA MER1_type 48 210 0 361 299 0 30 chr10 7138979 7139111 -133177654 + MIR SINE MIR 32 158 -82 658 328 20 4 chr10 7139122 7139366 -133177399 - MIR SINE MIR -13 249 2 269 350 43 17 chr10 7139925 7140042 -133176723 + MIR SINE MIR 25 144 -64 2995 262 37 39 chr10 7141279 7142459 -133174306 + L1MA9 LINE L1 42 1223 -5883 2486 160 3 0 chr10 7142459 7142822 -133173943 - THE1B LTR MaLR 0 364 1 2995 262 37 39 chr10 7142822 7143563 -133173202 + L1MA9 LINE L1 1223 1964 -5142 228 67 0 0 chr10 7143563 7143593 -133173172 + (TA)n Simple_repeat Simple_repeat 1 30 0 2995 262 37 39 chr10 7143593 7143609 -133173156 + L1MA9 LINE L1 1964 1979 -5127 2170 112 0 0 chr10 7143609 7143894 -133172871 - AluSg SINE Alu -25 285 1 2995 262 37 39 chr10 7143894 7144583 -133172182 + L1MA9 LINE L1 1979 2668 -4438 2261 114 16 0 chr10 7144583 7144891 -133171874 + AluSp SINE Alu 1 313 0 2995 262 37 39 chr10 7144891 7145766 -133170999 + L1MA9 LINE L1 2668 4135 -2971 4853 164 53 46 chr10 7145853 7146648 -133170117 + L1MA9 LINE L1 5280 6068 -1204 2411 193 39 0 chr10 7146648 7147058 -133169707 + MSTB LTR MaLR 1 426 0 4853 164 53 46 chr10 7147058 7147252 -133169513 + L1MA9 LINE L1 6068 6259 -1013 1657 109 91 69 chr10 7147252 7147562 -133169203 + AluSg SINE Alu 1 316 0 4853 164 53 46 chr10 7147562 7148344 -133168421 + L1MA9 LINE L1 6259 7063 -209 2763 136 11 33 chr10 7148346 7148669 -133168096 + L1PB3 LINE L1 5708 6020 -134 2149 119 10 3 chr10 7148669 7148979 -133167786 + AluSx SINE Alu 1 312 0 2763 136 11 33 chr10 7148979 7149110 -133167655 + L1PB3 LINE L1 6020 6152 -2 1203 154 23 14 chr10 7149129 7149343 -133167422 + L1MA9 LINE L1 7057 7272 0 763 311 10 0 chr10 7149623 7149829 -133166936 - MIR SINE MIR -32 230 23 357 281 189 0 chr10 7150964 7151128 -133165637 + MER112 DNA MER1_type 60 254 -6 2062 151 138 26 chr10 7151261 7151646 -133165119 - MSTA LTR MaLR 0 428 1 2381 126 27 33 chr10 7152375 7152741 -133164024 + THE1B LTR MaLR 1 364 0 2305 114 37 45 chr10 7153226 7153604 -133163161 - THE1C LTR MaLR 0 375 1 356 262 69 54 chr10 7154021 7154206 -133162559 + MIR SINE MIR 15 204 -4 1879 144 33 13 chr10 7154439 7154744 -133162021 + AluSx SINE Alu 1 311 -1 4456 183 11 0 chr10 7154828 7155617 -133161148 + L1MB3 LINE L1 5379 6176 -7 197 292 226 15 chr10 7156318 7156513 -133160252 - MIR SINE MIR -6 256 21 372 265 22 55 chr10 7156597 7156778 -133159987 - Charlie7 DNA MER1_type 0 2612 2438 227 286 9 29 chr10 7156754 7156859 -133159906 - Charlie7 DNA MER1_type -2502 110 8 * 2071 132 63 11 chr10 7157810 7158158 -133158607 - THE1C LTR MaLR 0 375 10 2088 254 48 36 chr10 7158843 7159675 -133157090 + L1ME3A LINE L1 5127 5973 -197 502 265 29 0 chr10 7159690 7159826 -133156939 + L1ME3A LINE L1 5913 6052 -118 441 259 52 35 chr10 7159850 7160024 -133156741 + L1ME3A LINE L1 5989 6165 -5 4772 27 2 0 chr10 7160144 7160670 -133156095 + L1PA5 LINE L1 5625 6151 -3 1765 178 27 40 chr10 7161981 7162351 -133154414 + MLT1A1 LTR MaLR 1 365 0 398 306 97 8 chr10 7162423 7162557 -133154208 - L2 LINE L2 0 3272 3127 814 319 25 0 chr10 7162647 7162885 -133153880 - MIR SINE MIR -6 256 13 204 352 0 0 chr10 7162904 7162992 -133153773 - L2 LINE L2 -193 3079 2992 466 302 83 0 chr10 7163807 7163976 -133152789 + MIR SINE MIR 28 210 -52 1129 253 68 7 chr10 7164295 7164591 -133152174 - MLT1C LTR MaLR 0 467 154 2399 173 24 18 chr10 7164600 7165057 -133151708 + MER66B LTR ERV1 27 486 0 693 134 104 0 chr10 7165057 7165191 -133151574 - MLT1C LTR MaLR -314 153 6 420 256 0 0 chr10 7166074 7166246 -133150519 + (TG)n Simple_repeat Simple_repeat 1 172 0 204 143 0 0 chr10 7166290 7166332 -133150433 + (TG)n Simple_repeat Simple_repeat 1 42 0 21 0 0 0 chr10 7166545 7166566 -133150199 + AT_rich Low_complexity Low_complexity 1 21 0 579 328 40 12 chr10 7166566 7166819 -133149946 + MIR SINE MIR 3 262 0 353 271 0 10 chr10 7167176 7167272 -133149493 + L2 LINE L2 3197 3291 -22 392 285 26 20 chr10 7167312 7167463 -133149302 - MIR SINE MIR -23 239 88 238 225 42 0 chr10 7167610 7167681 -133149084 + GA-rich Low_complexity Low_complexity 1 74 0 2287 133 38 12 chr10 7170391 7170737 -133146028 - THE1A LTR MaLR 0 355 1 2897 175 68 26 chr10 7171319 7171603 -133145162 - MER7C DNA MER2_type -2426 602 331 1876 117 9 74 chr10 7171603 7171745 -133145020 + AluJb SINE Alu 3 153 -159 2289 101 0 3 chr10 7171745 7172041 -133144724 + AluY SINE Alu 1 295 -16 1876 117 9 74 chr10 7172041 7172224 -133144541 + AluJb SINE Alu 153 307 -5 2897 175 68 26 chr10 7172224 7172517 -133144248 - MER7C DNA MER2_type -2697 331 1 2315 125 47 36 chr10 7172764 7173124 -133143641 + THE1B LTR MaLR 1 364 0 425 207 11 11 chr10 7173954 7174041 -133142724 + MER5B DNA MER1_type 5 91 -87 1098 268 96 28 chr10 7174142 7174384 -133142381 + MLT1C LTR MaLR 1 225 -242 2294 202 24 77 chr10 7174384 7174969 -133141796 - MLT2B3 LTR ERVL 0 554 1 1098 268 96 28 chr10 7174969 7175163 -133141602 + MLT1C LTR MaLR 225 467 0 226 250 215 0 chr10 7175720 7175864 -133140901 + MER112 DNA MER1_type 60 234 -26 383 211 53 44 chr10 7175886 7176000 -133140765 + L1MC5 LINE L1 7609 7723 -238 340 225 75 75 chr10 7176491 7176678 -133140087 + L1MC5 LINE L1 7717 7903 -58 180 337 112 53 chr10 7176937 7177106 -133139659 + L2 LINE L2 3088 3266 -6 2055 103 0 4 chr10 7177183 7177446 -133139319 + AluSp SINE Alu 34 295 -18 611 296 47 39 chr10 7177535 7177768 -133138997 - MIR SINE MIR -10 252 18 182 286 100 0 chr10 7177913 7177983 -133138782 - MIR SINE MIR -7 255 179 3590 174 0 17 chr10 7178623 7178684 -133138081 + L1MB3 LINE L1 5553 5614 -569 1568 220 48 20 chr10 7178684 7179039 -133137726 + MLT1A1 LTR MaLR 1 365 0 3590 174 0 17 chr10 7179039 7179584 -133137181 + L1MB3 LINE L1 5614 6150 -33 1910 100 30 50 chr10 7179584 7179885 -133136880 + AluSq SINE Alu 1 295 -18 3590 174 0 17 chr10 7179885 7179916 -133136849 + L1MB3 LINE L1 6150 6180 -3 205 200 0 0 chr10 7179920 7179960 -133136805 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 1938 129 0 11 chr10 7180358 7180638 -133136127 - AluSx SINE Alu -6 306 30 505 155 0 0 chr10 7180639 7180710 -133136055 + AluS SINE Alu 16 86 -226 300 70 0 0 chr10 7180723 7180766 -133135999 + (TTA)n Simple_repeat Simple_repeat 3 45 0 38765 30 26 1 chr10 7180766 7186187 -133130578 - L1PA2 LINE L1 -18 6137 578 828 41 0 0 chr10 7186154 7186252 -133130513 - L1PA2 LINE L1 -6048 98 1 * 221 277 78 64 chr10 7186323 7186464 -133130301 - MIR SINE MIR -72 190 48 1834 155 0 24 chr10 7187406 7187706 -133129059 + AluSx SINE Alu 11 293 -19 1956 71 0 4 chr10 7187711 7187958 -133128807 + AluY SINE Alu 46 289 -22 382 22 0 0 chr10 7187958 7188004 -133128761 + (TAAAA)n Simple_repeat Simple_repeat 5 180 0 894 110 26 39 chr10 7188250 7188367 -133128398 - Charlie3 DNA MER1_type 0 2702 2586 2177 121 0 7 chr10 7188367 7188664 -133128101 - AluSq SINE Alu -16 297 3 894 110 26 39 chr10 7188664 7188701 -133128064 - Charlie3 DNA MER1_type -116 2586 2550 319 43 0 0 chr10 7188712 7188759 -133128006 + Charlie3 DNA MER1_type 2529 2575 -135 * 2295 117 32 36 chr10 7188725 7189136 -133127629 - MER1A DNA MER1_type -120 409 1 1679 46 0 46 chr10 7189153 7189370 -133127395 + AluY SINE Alu 105 311 0 1931 172 0 16 chr10 7190151 7190465 -133126300 - AluJb SINE Alu -3 309 1 1247 134 0 0 chr10 7190818 7190997 -133125768 - AluYa5 SINE Alu 0 311 133 2877 179 39 7 chr10 7191001 7191391 -133125374 - L1MB2 LINE L1 0 6171 5756 2513 77 0 3 chr10 7191391 7191701 -133125064 - AluY SINE Alu -2 309 1 2877 179 39 7 chr10 7191701 7191880 -133124885 - L1MB2 LINE L1 -415 5756 5584 1496 266 113 43 chr10 7192156 7193074 -133123691 - L2 LINE L2 0 3313 2333 202 128 26 0 chr10 7193726 7193765 -133123000 + A-rich Low_complexity Low_complexity 2 41 0 587 327 98 42 chr10 7194504 7194691 -133122074 + L1MEc LINE L1 57 232 -6164 312 91 0 0 chr10 7194691 7194735 -133122030 + (CA)n Simple_repeat Simple_repeat 1 44 0 587 327 98 42 chr10 7194735 7195386 -133121379 + L1MEc LINE L1 232 942 -5454 * 2018 236 87 23 chr10 7195357 7196333 -133120432 + L1ME2 LINE L1 5183 6226 -7 352 22 0 0 chr10 7196980 7197026 -133119739 + MADE1 DNA Mariner 1 46 -34 321 300 44 19 chr10 7197505 7197665 -133119100 + HAL1 LINE L1 390 553 -1954 309 311 68 87 chr10 7197829 7197990 -133118775 + HAL1 LINE L1 1762 1919 -588 618 294 60 33 chr10 7198107 7198526 -133118239 + HAL1 LINE L1 1993 2422 -85 757 258 151 25 chr10 7198539 7198970 -133117795 + LTR16C LTR ERVL 6 490 -1 233 310 59 91 chr10 7200602 7200789 -133115976 + L3 LINE CR1 405 585 -992 348 285 77 68 chr10 7200829 7201036 -133115729 + MIR SINE MIR 43 251 -11 2530 60 0 13 chr10 7201290 7201605 -133115160 - AluY SINE Alu 0 311 1 1741 199 21 8 chr10 7201610 7201991 -133114774 - L1MB2 LINE L1 -2 6169 5784 1280 150 23 35 chr10 7201999 7202259 -133114506 + L1 LINE L1 3640 3896 -2250 1705 175 99 19 chr10 7202814 7203237 -133113528 + LTR48 LTR ERV1 331 787 0 35 54 0 0 chr10 7203386 7203442 -133113323 + AT_rich Low_complexity Low_complexity 1 56 0 1193 150 84 14 chr10 7203982 7204195 -133112570 + MER30 DNA MER1_type 1 228 -2 1947 129 13 30 chr10 7204431 7204734 -133112031 + AluSq SINE Alu 5 302 -11 2266 82 0 24 chr10 7205103 7205396 -133111369 + AluSc SINE Alu 1 286 -23 327 340 49 0 chr10 7206520 7206664 -133110101 + L1M4 LINE L1 2470 2620 -3526 296 311 47 16 chr10 7206732 7206989 -133109776 + L1M4 LINE L1 2681 2945 -3201 412 267 51 70 chr10 7207502 7207775 -133108990 + MER113 DNA MER1_type? 94 361 -160 215 200 50 33 chr10 7208544 7208604 -133108161 + MIR SINE MIR 120 180 -82 201 174 0 87 chr10 7209039 7209108 -133107657 + (TCTCTG)n Simple_repeat Simple_repeat 6 68 0 237 291 24 12 chr10 7209186 7209351 -133107414 + (TG)n Simple_repeat Simple_repeat 2 168 0 312 27 0 0 chr10 7209386 7209423 -133107342 + (TG)n Simple_repeat Simple_repeat 1 37 0 1905 111 7 32 chr10 7209549 7209828 -133106937 - AluSq SINE Alu -41 272 1 821 129 7 21 chr10 7209832 7209972 -133106793 + MER50 LTR ERV1 574 711 -23 609 218 60 32 chr10 7210071 7210354 -133106411 - LTR29 LTR ERV1 -89 529 221 2260 123 0 13 chr10 7210513 7210829 -133105936 + AluSx SINE Alu 1 312 0 312 238 27 96 chr10 7210858 7210955 -133105810 - L1M4 LINE L1 -778 5368 5266 1808 176 3 3 chr10 7210955 7211244 -133105521 + AluJo SINE Alu 2 290 -22 312 238 27 96 chr10 7211244 7211381 -133105384 - L1M4 LINE L1 -880 5266 5151 1328 255 88 76 chr10 7211381 7211683 -133105082 + MLT1E1 LTR MaLR 1 298 -356 1966 131 0 30 chr10 7211683 7212006 -133104759 - AluSx SINE Alu 0 312 1 1328 255 88 76 chr10 7212006 7212349 -133104416 + MLT1E1 LTR MaLR 298 654 0 312 238 27 96 chr10 7212349 7212374 -133104391 - L1M4 LINE L1 -995 5151 5126 2431 112 0 0 chr10 7212418 7212731 -133104034 + AluSq SINE Alu 1 313 0 231 241 241 9 chr10 7213238 7213354 -133103411 + MIR3 SINE MIR 66 208 0 538 194 123 32 chr10 7213809 7213964 -133102801 - MER21B LTR ERV1 -57 806 638 230 250 10 0 chr10 7214082 7214095 -133102670 + (TA)n Simple_repeat Simple_repeat 2 13 -85 1332 81 0 6 chr10 7214095 7214269 -133102496 + L1PA8 LINE L1 5991 6163 -9 230 250 10 0 chr10 7214269 7214351 -133102414 + (TA)n Simple_repeat Simple_repeat 13 98 0 804 148 42 5 chr10 7214493 7215305 -133101460 - L1MC1 LINE L1 0 6333 5188 1905 154 0 37 chr10 7215310 7215634 -133101131 - AluJb SINE Alu 0 312 1 1527 203 135 0 chr10 7215696 7216045 -133100720 - MSTD LTR MaLR 0 396 1 2406 167 55 7 chr10 7216835 7217271 -133099494 - LTR32 LTR ERVL 0 471 15 1681 94 106 196 chr10 7217329 7217799 -133098966 - MSTA LTR MaLR 0 428 1 413 213 66 115 chr10 7217848 7218031 -133098734 + MER5A DNA MER1_type 2 175 -14 810 200 7 0 chr10 7218032 7218177 -133098588 + MER5A DNA MER1_type 14 159 -30 216 0 0 0 chr10 7218568 7218592 -133098173 + (GA)n Simple_repeat Simple_repeat 2 25 0 529 333 94 19 chr10 7219064 7219427 -133097338 + L3 LINE CR1 487 876 -701 198 294 249 34 chr10 7219441 7219531 -133097234 + L3 LINE CR1 1020 1089 -488 2076 100 0 31 chr10 7219531 7219821 -133096944 + AluSx SINE Alu 18 298 -14 198 294 249 34 chr10 7219821 7219907 -133096858 + L3 LINE CR1 1089 1234 -343 438 274 137 0 chr10 7220522 7220719 -133096046 - L1MC/D LINE L1 -1997 5811 5588 2361 94 10 0 chr10 7220721 7221028 -133095737 - AluSx SINE Alu -2 310 1 1826 134 54 0 chr10 7221945 7222222 -133094543 + AluSx SINE Alu 1 292 -20 2443 107 0 0 chr10 7222225 7222535 -133094230 + AluSx SINE Alu 1 310 -2 1099 134 128 0 chr10 7222554 7222741 -133094024 + AluJo SINE Alu 84 294 -18 699 207 124 6 chr10 7222814 7222983 -133093782 + MER5A DNA MER1_type 1 189 0 193 338 119 0 chr10 7224223 7224383 -133092382 + MIR SINE MIR 31 209 -53 209 303 91 30 chr10 7224792 7224891 -133091874 - MIR3 SINE MIR -43 165 61 271 243 61 52 chr10 7225180 7225325 -133091440 - MIR SINE MIR -54 208 62 476 171 0 11 chr10 7226173 7226261 -133090504 + MIR3 SINE MIR 101 187 -21 612 255 133 49 chr10 7226551 7227035 -133089730 - L2 LINE L2 -31 3282 2759 273 284 154 38 chr10 7227221 7227380 -133089385 + MIR SINE MIR 35 206 -56 1936 163 0 22 chr10 7227965 7228284 -133088481 + AluJb SINE Alu 1 312 0 205 167 19 56 chr10 7229020 7229074 -133087691 + MER91B DNA MER1_type 4 55 -135 310 273 187 7 chr10 7230367 7230506 -133086259 - MER5A DNA MER1_type 0 189 26 372 94 0 0 chr10 7230718 7230771 -133085994 + (TG)n Simple_repeat Simple_repeat 1 53 0 194 161 0 0 chr10 7231781 7231812 -133084953 + MIR SINE MIR 67 97 -165 1004 224 5 14 chr10 7231934 7232144 -133084621 - MIR SINE MIR -34 228 21 271 306 90 9 chr10 7232317 7232428 -133084337 + MIR SINE MIR 28 147 -115 243 230 35 92 chr10 7233601 7233688 -133083077 + MIR SINE MIR 79 160 -102 355 259 123 65 chr10 7234155 7234325 -133082440 - MIR3 SINE MIR -19 189 10 207 245 20 0 chr10 7235100 7235149 -133081616 - MIR3 SINE MIR -8 200 151 516 286 239 19 chr10 7235210 7236232 -133080533 - L2 LINE L2 0 3313 2008 446 310 65 0 chr10 7236346 7236501 -133080264 - MIR SINE MIR -97 165 1 1662 180 80 50 chr10 7237207 7237584 -133079181 - MLT1B LTR MaLR -2 388 1 7379 33 0 0 chr10 7238979 7240020 -133076745 - L1P2 LINE L1 -638 5517 4476 190 259 0 52 chr10 7240065 7240123 -133076642 - L2 LINE L2 -18 3254 3200 274 243 243 37 chr10 7240145 7240281 -133076484 + MIR3 SINE MIR 12 175 -33 1230 67 11 6 chr10 7240724 7240903 -133075862 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1695 185 0 51 chr10 7240906 7241220 -133075545 - AluJb SINE Alu -14 298 1 4732 120 12 15 chr10 7241490 7241841 -133074924 + HSMAR2 DNA Mariner 2 352 -950 1750 121 0 0 chr10 7241841 7242072 -133074693 + AluSg/x SINE Alu 76 306 -4 4732 120 12 15 chr10 7242072 7242932 -133073833 + HSMAR2 DNA Mariner 352 1300 -2 378 362 46 9 chr10 7243799 7244017 -133072748 + MIR SINE MIR 22 247 -15 2319 86 7 10 chr10 7244639 7244940 -133071825 - AluSq SINE Alu -13 300 1 188 270 230 14 chr10 7245039 7245113 -133071652 - MIR SINE MIR -113 149 60 2344 120 0 0 chr10 7245618 7245917 -133070848 - AluSx SINE Alu -13 299 1 940 117 0 0 chr10 7246481 7246601 -133070164 - AluSq/x SINE Alu -193 120 1 341 283 80 43 chr10 7246652 7246790 -133069975 - L1M4 LINE L1 -1260 4886 4744 192 207 259 0 chr10 7246937 7246995 -133069770 - MIR SINE MIR -90 172 100 2319 119 0 0 chr10 7247576 7247888 -133068877 + AluSx SINE Alu 1 312 0 287 307 0 62 chr10 7248501 7248693 -133068072 + CT-rich Low_complexity Low_complexity 1 180 0 355 183 39 13 chr10 7248861 7249014 -133067751 + CT-rich Low_complexity Low_complexity 2 158 0 233 211 56 11 chr10 7249420 7249510 -133067255 - L1ME3 LINE L1 -91 6071 5978 1565 197 0 36 chr10 7251102 7251411 -133065354 + AluJb SINE Alu 1 298 -14 979 69 15 0 chr10 7252564 7252695 -133064070 + L1MA3 LINE L1 6173 6305 0 2001 131 10 17 chr10 7252851 7253149 -133063616 - AluSx SINE Alu -16 296 1 339 25 0 0 chr10 7253151 7253191 -133063574 + (TTA)n Simple_repeat Simple_repeat 2 41 0 1818 103 9 125 chr10 7253191 7253512 -133063253 - AluSx SINE Alu -18 284 1 2794 150 2 28 chr10 7253653 7253794 -133062971 + L1PB3 LINE L1 5694 5837 -317 2365 73 0 45 chr10 7253794 7254107 -133062658 - AluY SINE Alu -11 300 2 2794 150 2 28 chr10 7254107 7254431 -133062334 + L1PB3 LINE L1 5837 6147 -7 204 97 0 0 chr10 7254918 7254949 -133061816 + (A)n Simple_repeat Simple_repeat 1 31 0 1747 176 3 14 chr10 7254950 7255245 -133061520 - AluJo SINE Alu -9 303 12 435 280 140 29 chr10 7256089 7256296 -133060469 + MIR SINE MIR 20 249 -13 2458 87 0 0 chr10 7256583 7256881 -133059884 - AluSx SINE Alu -14 298 1 263 103 0 0 chr10 7257449 7257488 -133059277 + L1MA9 LINE L1 6274 6312 0 26 50 0 0 chr10 7257552 7257592 -133059173 + AT_rich Low_complexity Low_complexity 1 40 0 330 282 122 20 chr10 7257925 7258170 -133058595 - L2 LINE L2 -358 2956 2687 * 621 294 50 5 chr10 7258167 7258388 -133058377 + L2 LINE L2 1879 2109 -1205 191 318 11 34 chr10 7259181 7259269 -133057496 + MIR SINE MIR 103 188 -74 192 77 0 0 chr10 7260262 7260288 -133056477 + (GAA)n Simple_repeat Simple_repeat 2 27 0 907 185 38 12 chr10 7260518 7260752 -133056013 - L1MA6 LINE L1 -6 6294 6034 1066 151 5 21 chr10 7261327 7261519 -133055246 - MER5A DNA MER1_type 0 189 1 1088 164 31 62 chr10 7261708 7261934 -133054831 + MER20 DNA MER1_type 1 219 0 207 0 0 0 chr10 7262822 7262845 -133053920 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 999 209 70 42 chr10 7263017 7263372 -133053393 - L1MC5 LINE L1 -265 7696 7332 2259 78 0 11 chr10 7263394 7263713 -133053052 - AluY SINE Alu 0 316 1 2275 104 0 41 chr10 7263713 7264030 -133052735 - AluSx SINE Alu -8 304 1 1665 202 0 22 chr10 7264853 7265048 -133051717 - AluJo SINE Alu -2 310 123 315 0 0 0 chr10 7265048 7265083 -133051682 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1665 202 0 22 chr10 7265083 7265204 -133051561 - AluJo SINE Alu -189 123 1 316 312 88 2 chr10 7265288 7265425 -133051340 - MIR3 SINE MIR -52 156 9 196 278 93 86 chr10 7265959 7266025 -133050740 - L3 LINE CR1 -352 1225 1161 2096 154 0 0 chr10 7266025 7266324 -133050441 + AluJb SINE Alu 1 299 -13 196 278 93 86 chr10 7266324 7266408 -133050357 - L3 LINE CR1 -416 1161 1074 579 228 15 95 chr10 7266514 7266777 -133049988 - L1MC5 LINE L1 -48 7913 7672 211 287 138 21 chr10 7267025 7267119 -133049646 + MIR SINE MIR 30 134 -74 2619 40 0 3 chr10 7267344 7267644 -133049121 - AluY SINE Alu -12 299 1 189 380 58 16 chr10 7267685 7267927 -133048838 + L2 LINE L2 938 1189 -2125 225 125 0 0 chr10 7268096 7268128 -133048637 + MER63 DNA MER1_type 701 732 -328 864 108 7 50 chr10 7268132 7268271 -133048494 - FLAM_C SINE Alu 0 143 11 251 237 0 0 chr10 7268298 7268357 -133048408 + MER63 DNA MER1_type 968 1026 -35 347 302 128 54 chr10 7268497 7268941 -133047824 + L2 LINE L2 1563 2039 -1275 845 88 35 0 chr10 7269108 7269222 -133047543 - AluY SINE Alu -193 118 1 318 295 269 0 chr10 7269332 7269488 -133047277 + MIR SINE MIR 65 262 0 1807 145 13 30 chr10 7269710 7270014 -133046751 + AluSq SINE Alu 1 299 -14 37268 73 7 6 chr10 7270344 7275945 -133040820 + L1P2 LINE L1 175 5779 -375 1167 49 7 14 chr10 7275945 7276087 -133040678 + AluY SINE Alu 5 145 -166 691 197 48 21 chr10 7276235 7276423 -133040342 + LTR41 LTR ERVL 1 193 -580 378 237 128 83 chr10 7276681 7276935 -133039830 + LTR41 LTR ERVL 510 795 0 425 347 12 12 chr10 7277232 7277399 -133039366 - MIR SINE MIR -93 169 3 * 442 302 116 39 chr10 7277399 7277626 -133039139 - MIR SINE MIR -16 246 2 224 26 0 79 chr10 7277833 7277871 -133038894 + (CCCTAA)n Simple_repeat Simple_repeat 6 40 0 659 96 19 0 chr10 7278988 7279092 -133037673 + (GAAA)n Simple_repeat Simple_repeat 1 106 0 238 250 0 0 chr10 7280078 7280130 -133036635 - MER81 DNA DNA 0 114 63 2192 136 72 37 chr10 7280130 7280558 -133036207 - MSTB2 LTR MaLR 0 457 15 407 147 0 0 chr10 7280559 7280627 -133036138 - MER81 DNA DNA -45 69 2 376 259 17 52 chr10 7330745 7330861 -132985904 + L2 LINE L2 3199 3310 -3 264 368 22 22 chr10 7332687 7332869 -132983896 - L1ME LINE L1 -520 5601 5420 407 285 166 51 chr10 7333213 7333743 -132983022 - L1ME4a LINE L1 -5 6116 5526 279 276 25 107 chr10 7334976 7335028 -132981737 - MIR3 SINE MIR -8 200 145 2055 129 3 13 chr10 7335028 7335339 -132981426 - AluSg SINE Alu 0 310 3 279 276 25 107 chr10 7335339 7335482 -132981283 - MIR3 SINE MIR -63 145 21 23 0 0 0 chr10 7335951 7335974 -132980791 + AT_rich Low_complexity Low_complexity 1 23 0 2178 121 7 0 chr10 7335975 7336280 -132980485 + AluSg SINE Alu 1 307 -3 740 153 7 0 chr10 7336466 7336603 -132980162 + GA-rich Low_complexity Low_complexity 2 139 0 26 0 0 0 chr10 7336885 7336911 -132979854 + AT_rich Low_complexity Low_complexity 1 26 0 733 199 283 22 chr10 7338275 7338551 -132978214 - MER7A DNA MER2_type 0 346 1 607 271 21 0 chr10 7339019 7339163 -132977602 - L1ME LINE L1 -5573 497 351 27 0 0 0 chr10 7340527 7340554 -132976211 + AT_rich Low_complexity Low_complexity 1 27 0 1999 256 40 75 chr10 7340554 7341336 -132975429 + L1ME1 LINE L1 10 763 -5307 752 233 33 11 chr10 7341350 7341530 -132975235 + MER5A DNA MER1_type 1 184 -5 691 219 120 9 chr10 7341534 7341786 -132974979 + L1ME1 LINE L1 772 1045 -5035 1451 231 33 3 chr10 7341825 7342128 -132974637 + L1ME1 LINE L1 5260 5571 -529 1121 146 0 0 chr10 7342145 7342316 -132974449 + MLT1B LTR MaLR 1 171 -219 1932 123 49 7 chr10 7342320 7342604 -132974161 + AluSg SINE Alu 1 296 -14 1136 200 5 0 chr10 7342734 7342939 -132973826 + MLT1B LTR MaLR 185 390 0 935 234 65 27 chr10 7342941 7343202 -132973563 + L1ME1 LINE L1 5599 5869 -231 532 231 41 81 chr10 7343284 7343505 -132973260 + L1ME1 LINE L1 5869 6080 -20 232 233 29 29 chr10 7343525 7343628 -132973137 + A-rich Low_complexity Low_complexity 2 104 0 443 100 0 0 chr10 7343688 7343748 -132973017 - Alu SINE Alu -8 302 243 85 47 0 0 chr10 7343856 7343983 -132972782 + AT_rich Low_complexity Low_complexity 1 127 0 23 78 0 0 chr10 7344063 7344114 -132972651 + AT_rich Low_complexity Low_complexity 1 51 0 207 127 48 0 chr10 7344382 7344445 -132972320 + (TA)n Simple_repeat Simple_repeat 1 66 0 1221 180 0 14 chr10 7345097 7345308 -132971457 + AluJo SINE Alu 5 212 -100 688 201 107 44 chr10 7345313 7345472 -132971293 + AluJo SINE Alu 109 277 -35 180 0 0 0 chr10 7345480 7345500 -132971265 + (T)n Simple_repeat Simple_repeat 1 20 0 803 183 20 20 chr10 7345873 7346026 -132970739 + FRAM SINE Alu 10 162 -14 337 311 24 36 chr10 7346044 7346211 -132970554 + MIR SINE MIR 53 217 -45 407 302 16 16 chr10 7347586 7347712 -132969053 + MIR SINE MIR 112 237 -25 2494 83 0 3 chr10 7347841 7348154 -132968611 - AluSp SINE Alu -1 312 1 537 295 93 51 chr10 7349925 7349951 -132966814 + MIR SINE MIR 2 25 -237 2192 76 29 0 chr10 7349951 7350261 -132966504 - AluSg SINE Alu 0 318 1 537 295 93 51 chr10 7350261 7350469 -132966296 + MIR SINE MIR 25 248 -14 243 317 30 20 chr10 7350848 7350949 -132965816 - MIR SINE MIR -64 198 97 2049 95 0 130 chr10 7350989 7351336 -132965429 + AluSx SINE Alu 1 302 0 441 307 50 20 chr10 7351411 7351613 -132965152 - MLT1I LTR MaLR -2 407 200 436 337 137 49 chr10 7351707 7352131 -132964634 - L2 LINE L2 -89 3183 2733 210 336 67 8 chr10 7353667 7353786 -132962979 - MIR SINE MIR -123 139 14 * 255 303 17 59 chr10 7353716 7353835 -132962930 + MIR SINE MIR 39 152 -110 206 290 29 0 chr10 7355133 7355202 -132961563 + MIR3 SINE MIR 105 175 -33 187 383 32 11 chr10 7355342 7355436 -132961329 - MIR3 SINE MIR -105 103 8 236 143 24 95 chr10 7355447 7355531 -132961234 - Charlie7 DNA MER1_type -36 2576 2499 2493 239 103 22 chr10 7355603 7356544 -132960221 - Charlie7 DNA MER1_type -94 2518 1479 287 261 185 60 chr10 7356562 7356746 -132960019 - Charlie7 DNA MER1_type -2272 340 134 791 172 16 0 chr10 7356762 7356890 -132959875 + AluJo SINE Alu 5 134 -178 13395 127 92 5 chr10 7356894 7356940 -132959825 - L1PBa LINE L1 -3175 3687 3646 1972 141 13 16 chr10 7356940 7357252 -132959513 - AluSx SINE Alu -1 311 1 13395 127 92 5 chr10 7357252 7360014 -132956751 - L1PBa LINE L1 -3216 3646 634 960 191 21 0 chr10 7360014 7360208 -132956557 - L1PBa LINE L1 -6663 200 3 1952 70 0 0 chr10 7360221 7360464 -132956301 - L1P4 LINE L1 -469 5692 5450 366 301 103 14 chr10 7362177 7362323 -132954442 - MIR3 SINE MIR -10 198 40 196 279 51 25 chr10 7362908 7362987 -132953778 - L3b LINE CR1 -249 1334 1254 1888 183 16 35 chr10 7363076 7363448 -132953317 + MLT1A1 LTR MaLR 1 365 0 244 365 77 48 chr10 7363454 7363764 -132953001 - L2 LINE L2 -15 3257 2939 3009 80 0 0 chr10 7364236 7364609 -132952156 - L1PA13 LINE L1 -2 6161 5789 318 40 0 100 chr10 7364616 7364666 -132952099 - L1PA13 LINE L1 -344 5817 5773 468 105 0 0 chr10 7365147 7365223 -132951542 + (TC)n Simple_repeat Simple_repeat 1 76 0 645 10 0 134 chr10 7366645 7366742 -132950023 + L1PA2 LINE L1 15 98 -6048 * 38273 32 24 1 chr10 7366740 7372148 -132944617 + L1PA2 LINE L1 623 6155 0 2015 144 0 0 chr10 7372923 7373222 -132943543 - AluSx SINE Alu -13 299 1 199 331 41 50 chr10 7374023 7374144 -132942621 + L2 LINE L2 3153 3272 0 2252 121 0 0 chr10 7375715 7376021 -132940744 - AluSx SINE Alu -6 306 1 625 264 19 0 chr10 7376053 7376212 -132940553 + MIR SINE MIR 50 211 -51 183 265 0 20 chr10 7376712 7376761 -132940004 + L2 LINE L2 2988 3035 -237 309 206 41 0 chr10 7377796 7377869 -132938896 + MER103 DNA DNA 2 77 -89 2690 40 0 0 chr10 7378259 7378560 -132938205 + AluY SINE Alu 1 301 -10 2032 121 28 0 chr10 7378606 7378895 -132937870 + AluSx SINE Alu 1 297 -15 242 71 0 24 chr10 7379253 7379295 -132937470 + (ATG)n Simple_repeat Simple_repeat 3 43 0 1587 206 0 3 chr10 7379319 7379606 -132937159 - AluJo SINE Alu -26 286 1 424 217 43 2 chr10 7379658 7379834 -132936931 + LTR16A1 LTR ERVL 246 457 0 2156 99 34 0 chr10 7380171 7380463 -132936302 - AluSg SINE Alu -8 302 1 597 332 53 4 chr10 7381370 7381596 -132935169 + L2 LINE L2 2812 3048 -265 239 217 0 22 chr10 7381992 7382038 -132934727 + MER106B DNA MER1_type 1 45 -1014 634 195 27 34 chr10 7382056 7382205 -132934560 + MER106B DNA MER1_type 908 1055 -4 2189 101 10 0 chr10 7382785 7383082 -132933683 - AluSp SINE Alu -13 300 1 197 139 23 0 chr10 7383526 7383569 -132933196 + (TG)n Simple_repeat Simple_repeat 1 44 0 558 261 141 0 chr10 7384523 7384707 -132932058 - MIR SINE MIR 0 262 53 1520 202 70 89 chr10 7384745 7385275 -132931490 - MLT2B1 LTR ERVL 0 520 1 1103 84 17 11 chr10 7385332 7385511 -132931254 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 180 152 0 0 chr10 7385511 7385544 -132931221 + CT-rich Low_complexity Low_complexity 2 34 0 1966 132 0 0 chr10 7385545 7385818 -132930947 - AluSx SINE Alu -39 273 1 849 138 8 8 chr10 7386661 7386791 -132929974 + FLAM_C SINE Alu 1 130 -3 216 0 0 0 chr10 7386794 7386818 -132929947 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 1388 179 39 0 chr10 7386835 7387069 -132929696 + AluJb SINE Alu 1 243 -69 265 163 62 0 chr10 7387207 7387287 -132929478 + (TTATA)n Simple_repeat Simple_repeat 2 86 0 2173 53 0 8 chr10 7388205 7388467 -132928298 - L1PA5 LINE L1 -3 6151 5892 2236 85 7 4 chr10 7389350 7389680 -132927085 - AluSq SINE Alu 0 331 1 969 233 33 14 chr10 7390308 7390523 -132926242 + MER20 DNA MER1_type 1 219 0 293 235 188 0 chr10 7390924 7391009 -132925756 - MLT1J2 LTR MaLR -161 289 189 1047 217 7 8 chr10 7391201 7391446 -132925319 - MLT2B1 LTR ERVL -173 241 3 284 256 44 11 chr10 7391446 7391536 -132925229 - L1M LINE L1 -752 5410 5318 1246 224 16 32 chr10 7392058 7392371 -132924394 - AluJo SINE Alu -4 308 1 1108 288 69 37 chr10 7392517 7393363 -132923402 - L1M4 LINE L1 -901 5245 4373 229 317 0 20 chr10 7393642 7393743 -132923022 + T-rich Low_complexity Low_complexity 2 100 0 1600 184 54 32 chr10 7393887 7394203 -132922562 - MER58B DNA MER1_type 0 341 19 2467 121 8 8 chr10 7395974 7396338 -132920427 - THE1B LTR MaLR 0 364 1 246 136 0 0 chr10 7396908 7396952 -132919813 + (TC)n Simple_repeat Simple_repeat 2 45 0 198 352 28 9 chr10 7399682 7399790 -132916975 - L2 LINE L2 0 3272 3163 5950 65 11 0 chr10 7400127 7401328 -132915437 - L1PA8A LINE L1 -2 6129 5021 305 155 0 17 chr10 7401328 7401375 -132915390 - L1P LINE L1 -3432 2714 2667 1017 121 0 7 chr10 7401375 7401515 -132915250 - AluSq/x SINE Alu -173 139 1 705 230 0 0 chr10 7401638 7401816 -132914949 + (CA)n Simple_repeat Simple_repeat 1 178 0 207 114 0 0 chr10 7402869 7402904 -132913861 + (TCC)n Simple_repeat Simple_repeat 1 35 0 387 312 34 29 chr10 7402943 7403148 -132913617 - MIR SINE MIR -14 248 43 1419 194 44 106 chr10 7403350 7403784 -132912981 - MLT2D LTR ERVL -7 407 1 407 217 0 0 chr10 7405891 7405974 -132910791 + L2 LINE L2 1935 2017 -1297 375 78 0 0 chr10 7406701 7406752 -132910013 + (GA)n Simple_repeat Simple_repeat 1 51 0 417 286 97 7 chr10 7406872 7407026 -132909739 + L2 LINE L2 2363 2530 -784 1478 113 0 0 chr10 7407045 7407239 -132909526 + AluSx SINE Alu 1 194 -118 939 88 64 0 chr10 7407239 7407364 -132909401 + AluSg/x SINE Alu 143 275 -35 1784 108 115 0 chr10 7407445 7407705 -132909060 - AluSx SINE Alu -18 294 5 237 326 74 0 chr10 7408283 7408378 -132908387 + HAL1 LINE L1 19 120 -2387 1795 149 30 33 chr10 7409589 7409890 -132906875 - AluJo SINE Alu -12 300 1 1534 115 165 27 chr10 7411434 7411695 -132905070 - AluSg SINE Alu -3 297 1 2677 33 7 0 chr10 7413065 7413366 -132903399 + AluY SINE Alu 1 303 -8 1637 177 55 6 chr10 7413652 7413979 -132902786 + MER2 DNA MER2_type 1 343 -1 185 0 40 0 chr10 7414442 7414467 -132902298 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 524 200 8 0 chr10 7416917 7417042 -132899723 + (TCCA)n Simple_repeat Simple_repeat 3 128 0 195 283 151 13 chr10 7417237 7417389 -132899376 - MIR SINE MIR -3 259 87 1340 172 17 4 chr10 7418361 7418599 -132898166 + AluJb SINE Alu 64 304 -8 1798 178 0 16 chr10 7419181 7419485 -132897280 - AluJb SINE Alu -13 299 1 1532 196 91 6 chr10 7420161 7420502 -132896263 - MLT1A2 LTR MaLR -4 370 1 1528 104 75 90 chr10 7421331 7421610 -132895155 - AluSq SINE Alu 0 313 39 2125 130 3 0 chr10 7423618 7423910 -132892855 + AluSc SINE Alu 1 293 -16 274 284 0 14 chr10 7424909 7424983 -132891782 + CT-rich Low_complexity Low_complexity 2 74 0 943 199 0 0 chr10 7425574 7425735 -132891030 - AluJo SINE Alu -5 297 137 2338 114 56 8 chr10 7425738 7426096 -132890669 - THE1C LTR MaLR 0 375 1 794 161 8 0 chr10 7426109 7426239 -132890526 - AluJo SINE Alu -171 131 1 2702 48 0 0 chr10 7426345 7426661 -132890104 - L1PA5 LINE L1 -343 5811 5496 2274 73 23 7 chr10 7426664 7426966 -132889799 + L1PA5 LINE L1 5842 6148 -6 316 258 22 0 chr10 7427248 7427337 -132889428 - HAL1 LINE L1 -861 1646 1556 2198 101 0 10 chr10 7427352 7427640 -132889125 + AluSx SINE Alu 5 289 -23 424 188 51 68 chr10 7427716 7427833 -132888932 - HAL1 LINE L1 -1813 694 580 443 308 115 40 chr10 7427877 7428250 -132888515 - HAL1 LINE L1 -2099 408 8 2297 114 57 20 chr10 7428438 7428789 -132887976 + THE1B LTR MaLR 1 364 0 248 286 133 0 chr10 7428993 7429091 -132887674 + L2 LINE L2 3200 3310 -3 2103 117 7 26 chr10 7429132 7429441 -132887324 - AluSx SINE Alu -9 303 1 965 255 109 26 chr10 7430025 7430448 -132886317 - MLT1C LTR MaLR -4 463 6 21 0 0 0 chr10 7430595 7430616 -132886149 + AT_rich Low_complexity Low_complexity 1 21 0 447 19 0 0 chr10 7430684 7430736 -132886029 + (CA)n Simple_repeat Simple_repeat 2 53 0 2427 88 0 0 chr10 7431633 7431928 -132884837 + AluSx SINE Alu 1 295 -17 718 120 0 7 chr10 7432782 7433000 -132883765 + AluSx SINE Alu 37 304 -8 405 278 99 68 chr10 7433005 7433059 -132883706 + L2 LINE L2 2437 2488 -825 1899 203 104 38 chr10 7433059 7433586 -132883179 - MER68 LTR ERV1 0 562 1 405 278 99 68 chr10 7433586 7434054 -132882711 + L2 LINE L2 2488 3045 -268 2459 94 0 0 chr10 7434054 7434361 -132882404 + AluSx SINE Alu 1 307 -5 405 278 99 68 chr10 7434361 7434632 -132882133 + L2 LINE L2 3045 3306 -7 2020 125 3 0 chr10 7434943 7435230 -132881535 + AluSx SINE Alu 1 288 -24 494 90 0 13 chr10 7435230 7435308 -132881457 + (GGGA)n Simple_repeat Simple_repeat 1 77 0 198 103 0 0 chr10 7435487 7435516 -132881249 + (T)n Simple_repeat Simple_repeat 1 29 0 2115 105 3 7 chr10 7436902 7437215 -132879550 + AluSx SINE Alu 1 312 0 642 288 106 30 chr10 7439779 7440186 -132876579 + MLT1L LTR MaLR 146 583 -32 724 192 61 37 chr10 7440812 7441026 -132875739 + MER20 DNA MER1_type 1 219 0 1832 164 14 3 chr10 7442211 7442503 -132874262 + AluJb SINE Alu 1 295 -17 1665 123 4 0 chr10 7443300 7443319 -132873446 - AluSx SINE Alu -8 304 287 258 32 0 0 chr10 7443319 7443350 -132873415 + (TCCCC)n Simple_repeat Simple_repeat 5 35 0 1665 123 4 0 chr10 7443350 7443574 -132873191 - AluSx SINE Alu -25 287 60 370 280 32 24 chr10 7444201 7444326 -132872439 + MIR SINE MIR 5 130 -132 924 181 136 0 chr10 7444435 7444634 -132872131 - MER46A DNA MER2_type 0 236 11 2312 78 0 27 chr10 7445609 7445904 -132870861 - AluSc SINE Alu -22 287 1 2599 235 81 33 chr10 7446924 7447691 -132869074 - MER21B LTR ERV1 -51 812 9 2079 130 0 0 chr10 7448965 7449250 -132867515 - AluSg SINE Alu -25 285 1 747 150 41 0 chr10 7449282 7449429 -132867336 - L1MA4 LINE L1 -3 6297 6145 4164 142 66 1 chr10 7449629 7450328 -132866437 + L1PA16 LINE L1 5423 6166 0 944 141 0 0 chr10 7452430 7452565 -132864200 + AluJo SINE Alu 1 135 -177 2290 125 0 0 chr10 7453027 7453339 -132863426 + AluSx SINE Alu 1 312 0 2401 98 0 0 chr10 7453698 7454003 -132862762 - AluSg SINE Alu -5 305 1 21 57 0 0 chr10 7454436 7454471 -132862294 + AT_rich Low_complexity Low_complexity 1 35 0 323 297 27 9 chr10 7454759 7454870 -132861895 + MIR3 SINE MIR 14 126 -82 327 231 45 52 chr10 7455160 7455294 -132861471 - L2 LINE L2 -87 3226 3094 254 244 0 61 chr10 7457981 7458063 -132858702 - MIR SINE MIR -130 132 56 29 0 0 0 chr10 7458815 7458844 -132857921 + AT_rich Low_complexity Low_complexity 1 29 0 2465 108 8 22 chr10 7459143 7459512 -132857253 - THE1B LTR MaLR 0 364 1 1124 273 93 44 chr10 7459672 7460196 -132856569 + L1MC4a LINE L1 5393 5942 -1866 261 311 11 11 chr10 7460418 7460508 -132856257 - MIR3 SINE MIR -21 187 98 203 147 0 0 chr10 7460896 7460930 -132855835 + (TGG)n Simple_repeat Simple_repeat 2 35 0 463 266 211 0 chr10 7462109 7462398 -132854367 + L2 LINE L2 2456 2805 -509 2042 96 0 0 chr10 7462518 7462778 -132853987 + AluY SINE Alu 43 302 -9 307 250 26 0 chr10 7462821 7462897 -132853868 - L2 LINE L2 -2 3311 3234 1225 192 40 14 chr10 7466243 7466519 -132850246 - L1MB3 LINE L1 -2 6181 5899 2174 148 11 0 chr10 7467034 7467385 -132849380 - THE1A LTR MaLR 0 355 1 276 289 115 19 chr10 7467431 7467587 -132849178 + MIR SINE MIR 25 195 -67 1918 138 17 17 chr10 7468186 7468483 -132848282 - AluJb SINE Alu -15 297 1 3650 55 2 4 chr10 7470362 7470819 -132845946 - L1PA8 LINE L1 0 6172 5717 467 221 131 14 chr10 7472488 7472633 -132844132 + MIR SINE MIR 29 190 -72 195 69 0 0 chr10 7472788 7472817 -132843948 + (TTTTTG)n Simple_repeat Simple_repeat 3 31 0 758 239 75 25 chr10 7473879 7474159 -132842606 - L1MC4a LINE L1 -1779 6029 5736 260 91 0 0 chr10 7474284 7474317 -132842448 - U2 snRNA snRNA -155 33 1 2129 92 0 4 chr10 7474911 7475182 -132841583 - AluSq SINE Alu -5 308 39 1480 226 10 3 chr10 7476065 7476545 -132840220 - AluJb SINE Alu 0 482 1 908 159 0 0 chr10 7476547 7476679 -132840086 - AluJo/FLAM SINE Alu -180 132 1 198 0 0 0 chr10 7477557 7477579 -132839186 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 1376 180 22 73 chr10 7478232 7478549 -132838216 + AluJb SINE Alu 1 301 -11 2132 100 21 0 chr10 7478735 7479026 -132837739 - AluSq SINE Alu -16 297 1 2120 117 0 20 chr10 7479606 7479905 -132836860 + AluSx SINE Alu 1 293 -19 276 268 107 18 chr10 7481535 7481647 -132835118 + MIR SINE MIR 21 142 -66 952 194 22 0 chr10 7482244 7482424 -132834341 - MER5A DNA MER1_type -4 185 2 2086 155 0 0 chr10 7484343 7484647 -132832118 + AluSx SINE Alu 1 304 -8 279 167 0 0 chr10 7484648 7484696 -132832069 - AluSp/q SINE Alu -6 297 250 1295 96 0 0 chr10 7484698 7484855 -132831910 - AluSx SINE Alu -147 165 9 650 337 36 36 chr10 7484976 7485442 -132831323 + L1ME3A LINE L1 5415 5880 -290 395 342 99 14 chr10 7491811 7492156 -132824609 - L2 LINE L2 -8 3305 2932 200 286 51 10 chr10 7492140 7492238 -132824527 - L2 LINE L2 -579 2735 2634 * 449 259 42 36 chr10 7492303 7492457 -132824308 - L2 LINE L2 -1420 1894 1737 2253 122 39 28 chr10 7492457 7492817 -132823948 - THE1B LTR MaLR 0 364 1 449 259 42 36 chr10 7492817 7492828 -132823937 - L2 LINE L2 -1577 1737 1728 841 152 15 0 chr10 7497013 7497145 -132819620 + AluJo SINE Alu 2 135 -177 428 171 0 11 chr10 7497147 7497235 -132819530 + (TATG)n Simple_repeat Simple_repeat 2 88 0 2124 141 33 33 chr10 7499071 7499434 -132817331 - THE1B LTR MaLR -1 363 1 3556 26 2 0 chr10 7500746 7501161 -132815604 - L1PA4 LINE L1 -3 6152 5737 1929 125 30 0 chr10 7501285 7501580 -132815185 + AluSq SINE Alu 1 304 -9 274 212 30 0 chr10 7502130 7502196 -132814569 - L1MC4 LINE L1 -133 7909 7842 548 158 24 4 chr10 7502196 7502363 -132814402 - MER46A DNA MER2_type 0 236 1 1766 106 0 4 chr10 7502366 7502612 -132814153 - AluSc SINE Alu -12 297 53 294 167 19 0 chr10 7502613 7502667 -132814098 - MER68 LTR ERV1 -503 59 5 362 239 23 0 chr10 7502689 7502777 -132813988 - L1MC4 LINE L1 -1455 6587 6498 591 258 150 41 chr10 7502934 7503184 -132813581 - LTR16A LTR ERVL -57 393 95 1853 126 0 54 chr10 7503184 7503501 -132813264 + AluSx SINE Alu 1 300 -12 591 258 150 41 chr10 7503501 7503591 -132813174 - LTR16A LTR ERVL -355 95 16 252 59 0 0 chr10 7504199 7504233 -132812532 + (T)n Simple_repeat Simple_repeat 1 34 0 1387 213 41 46 chr10 7505515 7505736 -132811029 - MLT1B LTR MaLR 0 390 170 1339 202 26 10 chr10 7505736 7506038 -132810727 - AluJo SINE Alu -1 311 5 1387 213 41 46 chr10 7506038 7506205 -132810560 - MLT1B LTR MaLR -220 170 4 212 0 36 0 chr10 7508654 7508682 -132808083 + (CA)n Simple_repeat Simple_repeat 2 30 0 258 304 43 35 chr10 7509615 7509730 -132807035 - MIR3 SINE MIR -12 196 81 630 242 60 64 chr10 7510428 7510753 -132806012 - MLT1B LTR MaLR -6 384 40 333 294 49 11 chr10 7512761 7512945 -132803820 - L1MDa LINE L1 -5625 915 725 1829 250 54 32 chr10 7512958 7513607 -132803158 - L1MDa LINE L1 -5867 673 11 2047 133 0 9 chr10 7514359 7514674 -132802091 + AluSx SINE Alu 1 312 0 1377 71 0 0 chr10 7515544 7515714 -132801051 - AluSq SINE Alu -18 295 126 401 223 40 68 chr10 7517000 7517148 -132799617 + L2 LINE L2 3170 3313 0 278 375 19 0 chr10 7517321 7517425 -132799340 + MIR SINE MIR 39 144 -64 186 43 0 0 chr10 7517528 7517551 -132799214 + (CAGAA)n Simple_repeat Simple_repeat 5 27 0 347 73 18 0 chr10 7518815 7518870 -132797895 + (TG)n Simple_repeat Simple_repeat 2 57 0 1671 166 17 7 chr10 7519210 7519512 -132797253 - AluJo SINE Alu -7 305 1 243 0 0 0 chr10 7520466 7520493 -132796272 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 2104 114 0 3 chr10 7520498 7520797 -132795968 - AluSx SINE Alu -14 298 1 201 365 111 8 chr10 7521124 7521250 -132795515 + MIR3 SINE MIR 17 155 -53 328 185 62 0 chr10 7525418 7525483 -132791282 - AluJ/FRAM SINE Alu -2 300 232 886 164 26 0 chr10 7525568 7525720 -132791045 - FRAM SINE Alu -21 155 1 275 296 211 13 chr10 7526565 7526717 -132790048 + MIR SINE MIR 20 201 -61 336 272 39 0 chr10 7527578 7527681 -132789084 - L1M4 LINE L1 -1023 5123 5017 1274 159 42 85 chr10 7527742 7528025 -132788740 + AluJo SINE Alu 7 277 -35 271 271 123 47 chr10 7528219 7528455 -132788310 - L1M4 LINE L1 -1248 4898 4645 383 264 0 21 chr10 7529100 7529210 -132787555 - L1ME2 LINE L1 -298 5866 5760 375 23 0 0 chr10 7529210 7529254 -132787511 + (CA)n Simple_repeat Simple_repeat 2 45 0 267 329 0 0 chr10 7529510 7529586 -132787179 - MIR SINE MIR -108 154 79 192 244 24 0 chr10 7530452 7530493 -132786272 - MIR SINE MIR -3 259 218 547 219 61 114 chr10 7530547 7530793 -132785972 + L2 LINE L2 3081 3313 0 * 559 256 149 14 chr10 7530767 7530982 -132785783 - MIR SINE MIR -6 256 13 184 287 41 98 chr10 7531316 7531438 -132785327 - MIR SINE MIR -6 256 142 295 333 72 0 chr10 7531511 7531622 -132785143 + L2 LINE L2 3139 3257 -15 305 303 0 35 chr10 7531784 7531926 -132784839 + C-rich Low_complexity Low_complexity 6 142 0 445 338 0 0 chr10 7532166 7532314 -132784451 + C-rich Low_complexity Low_complexity 1 148 0 774 157 0 0 chr10 7532427 7532787 -132783978 + GA-rich Low_complexity Low_complexity 1 360 0 195 330 0 34 chr10 7533283 7533371 -132783394 - MIR SINE MIR -74 188 104 2422 60 0 0 chr10 7533868 7534166 -132782599 - AluY SINE Alu -12 299 2 229 216 0 54 chr10 7534566 7534640 -132782125 + L1ME LINE L1 4577 4646 -1500 2288 135 16 16 chr10 7534708 7535072 -132781693 + THE1B LTR MaLR 1 364 0 258 32 0 0 chr10 7535273 7535304 -132781461 + (CA)n Simple_repeat Simple_repeat 2 32 0 311 301 38 38 chr10 7535581 7535714 -132781051 + L1ME LINE L1 5653 5785 -377 2058 116 13 10 chr10 7535838 7536149 -132780616 + AluSx SINE Alu 1 312 0 207 69 0 0 chr10 7536549 7536578 -132780187 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 1132 174 64 138 chr10 7537297 7537628 -132779137 - MLT1B LTR MaLR 0 390 95 2369 73 0 0 chr10 7537628 7537930 -132778835 - AluSx SINE Alu -6 306 5 1132 174 64 138 chr10 7537930 7538018 -132778747 - MLT1B LTR MaLR -295 95 2 421 267 61 28 chr10 7538198 7538378 -132778387 - MER20B DNA MER1_type -83 700 515 930 127 40 0 chr10 7538424 7538597 -132778168 + L1MB8 LINE L1 5998 6177 -1 984 289 102 11 chr10 7538676 7539116 -132777649 - MER20B DNA MER1_type -268 515 36 2992 198 84 30 chr10 7539878 7540086 -132776679 - L1ME1 LINE L1 -1 6165 5970 2039 114 0 0 chr10 7540086 7540366 -132776399 + AluSx SINE Alu 22 301 -11 2992 198 84 30 chr10 7540366 7541336 -132775429 - L1ME1 LINE L1 -196 5970 4922 180 111 0 0 chr10 7541897 7541924 -132774841 + (ATG)n Simple_repeat Simple_repeat 1 27 0 562 269 44 0 chr10 7542189 7542349 -132774416 - MLT1G LTR MaLR 0 590 424 * 998 275 50 17 chr10 7542347 7542645 -132774120 - MLT1G LTR MaLR -271 319 12 251 157 12 36 chr10 7543307 7543390 -132773375 + CT-rich Low_complexity Low_complexity 1 81 0 200 254 51 0 chr10 7544320 7544379 -132772386 - MIR3 SINE MIR -50 158 97 2044 105 0 40 chr10 7544404 7544708 -132772057 + AluSx SINE Alu 17 308 -4 2319 103 0 0 chr10 7545531 7545832 -132770933 - AluSx SINE Alu -11 301 1 243 250 0 0 chr10 7545990 7546038 -132770727 + L2 LINE L2 3219 3266 -6 1312 144 0 10 chr10 7546058 7546252 -132770513 - AluJo SINE Alu -14 298 107 570 137 11 0 chr10 7546252 7546347 -132770418 - THE1C LTR MaLR -1 374 279 236 342 7 20 chr10 7546348 7546500 -132770265 + CT-rich Low_complexity Low_complexity 3 152 0 839 259 47 0 chr10 7547751 7547987 -132768778 + L1MB3 LINE L1 5934 6180 -3 351 0 0 0 chr10 7548248 7548287 -132768478 + (CA)n Simple_repeat Simple_repeat 2 40 0 825 168 14 7 chr10 7549174 7549317 -132767448 + FRAM SINE Alu 1 144 -32 315 0 0 0 chr10 7549317 7549352 -132767413 + (CAAT)n Simple_repeat Simple_repeat 4 38 0 2322 131 80 10 chr10 7550003 7550401 -132766364 + MSTA LTR MaLR 1 426 -2 2225 154 17 51 chr10 7550989 7551404 -132765361 - Tigger2a DNA MER2_type -33 401 1 2168 110 3 0 chr10 7551623 7551941 -132764824 + AluSq SINE Alu 1 319 0 1654 130 14 11 chr10 7552793 7553069 -132763696 - Tigger2a DNA MER2_type -157 277 1 690 131 0 25 chr10 7553220 7553342 -132763423 + AluJb SINE Alu 185 303 -9 725 254 23 9 chr10 7554343 7554560 -132762205 + L1MC5 LINE L1 7706 7925 -36 2453 54 40 3 chr10 7555063 7555361 -132761404 - AluY SINE Alu -2 309 1 5196 120 8 10 chr10 7555610 7556392 -132760373 - L1PA15 LINE L1 -69 6096 5317 2304 132 25 6 chr10 7556907 7557264 -132759501 + THE1B LTR MaLR 1 364 0 2281 71 40 17 chr10 7557349 7557645 -132759120 + AluYa5 SINE Alu 1 303 -8 2281 116 0 0 chr10 7558020 7558321 -132758444 - AluSg SINE Alu -9 301 1 255 229 125 0 chr10 7558911 7559007 -132757758 - HAL1 LINE L1 -1036 1471 1364 1961 103 0 66 chr10 7559352 7559693 -132757072 + AluSx SINE Alu 1 321 0 249 219 42 135 chr10 7559711 7559903 -132756862 + MLT1J LTR MaLR 1 174 -337 2318 99 0 28 chr10 7562102 7562424 -132754341 - AluSq SINE Alu 0 313 1 439 267 35 47 chr10 7564058 7564230 -132752535 - MIR SINE MIR -40 222 53 27 0 0 0 chr10 7564535 7564562 -132752203 + AT_rich Low_complexity Low_complexity 1 27 0 1411 132 15 0 chr10 7565002 7565199 -132751566 - AluJo SINE Alu -26 286 87 2276 89 4 0 chr10 7565395 7565709 -132751056 + AluY SINE Alu 1 315 0 795 214 199 47 chr10 7566225 7566469 -132750296 - Charlie2 DNA MER1_type -3 2859 2653 2340 98 0 13 chr10 7566469 7566785 -132749980 + AluSx SINE Alu 1 312 0 795 214 199 47 chr10 7566785 7567053 -132749712 - Charlie2 DNA MER1_type -209 2653 2269 312 271 88 39 chr10 7567130 7567311 -132749454 - Charlie2 DNA MER1_type -2571 211 22 1387 203 75 11 chr10 7567347 7567722 -132749043 - Zaphod DNA AcHobo -37 3994 3596 1399 230 167 97 chr10 7567723 7568210 -132748555 - Zaphod DNA AcHobo -3043 988 537 1880 134 0 7 chr10 7568210 7568501 -132748264 + AluSg1 SINE Alu 15 303 0 1399 230 167 97 chr10 7568501 7568934 -132747831 - Zaphod DNA AcHobo -3494 537 2 2048 109 11 18 chr10 7569058 7569383 -132747382 - AluSx SINE Alu 0 323 1 1399 206 23 99 chr10 7569890 7570332 -132746433 + MLT2D LTR ERVL 7 414 0 223 288 41 0 chr10 7572597 7572670 -132744095 + MIR SINE MIR 121 196 -66 1853 166 7 3 chr10 7572797 7573098 -132743667 + AluJb SINE Alu 1 302 -10 36 53 0 0 chr10 7573558 7573615 -132743150 + AT_rich Low_complexity Low_complexity 1 57 0 24 0 0 0 chr10 7573900 7573924 -132742841 + AT_rich Low_complexity Low_complexity 1 24 0 212 259 137 58 chr10 7575610 7575661 -132741104 - MIR3 SINE MIR -14 194 148 2501 77 16 56 chr10 7575661 7575966 -132740799 + THE1B LTR MaLR 1 290 -74 2352 76 3 0 chr10 7575966 7576257 -132740508 - AluSg SINE Alu -18 292 1 2501 77 16 56 chr10 7576257 7576329 -132740436 + THE1B LTR MaLR 290 363 -1 212 259 137 58 chr10 7576329 7576416 -132740349 - MIR3 SINE MIR -60 148 45 1843 186 60 35 chr10 7578165 7578596 -132738169 + L1MB7 LINE L1 5728 6169 -15 907 184 61 10 chr10 7579377 7579573 -132737192 - MER20B DNA MER1_type 0 219 14 268 93 0 0 chr10 7579681 7579724 -132737041 - L1PA2 LINE L1 0 6155 6113 236 217 0 66 chr10 7579893 7579999 -132736766 + CT-rich Low_complexity Low_complexity 1 99 0 948 201 56 42 chr10 7580636 7580924 -132735841 - MER33 DNA MER1_type -14 310 19 650 213 31 0 chr10 7581660 7581787 -132734978 + FLAM_A SINE Alu 3 133 0 1909 141 0 24 chr10 7582480 7582778 -132733987 - AluJb SINE Alu -21 291 1 2192 129 0 10 chr10 7583727 7584038 -132732727 - AluSx SINE Alu -4 308 1 2311 91 30 0 chr10 7584532 7584829 -132731936 - AluSx SINE Alu -6 306 1 1684 169 77 66 chr10 7585616 7586043 -132730722 + MSTB1 LTR MaLR 1 432 0 2015 147 7 0 chr10 7586593 7586899 -132729866 + AluSx SINE Alu 1 308 -4 450 0 0 0 chr10 7588363 7588413 -132728352 + (CA)n Simple_repeat Simple_repeat 1 50 0 2176 86 0 40 chr10 7589050 7589352 -132727413 + AluY SINE Alu 22 311 0 2451 75 3 3 chr10 7589501 7589807 -132726958 + AluSc SINE Alu 1 306 -3 3640 113 0 52 chr10 7589915 7590471 -132726294 - MER1A DNA MER1_type 0 527 1 1903 166 103 35 chr10 7590655 7591052 -132725713 - MLT2B1 LTR ERVL -95 425 2 2150 121 7 0 chr10 7591620 7591909 -132724856 - AluSx SINE Alu -19 293 3 304 217 0 0 chr10 7592957 7593017 -132723748 + MIR3 SINE MIR 133 192 -16 290 323 155 0 chr10 7594024 7594179 -132722586 + MIR SINE MIR 2 180 -82 180 176 0 0 chr10 7594208 7594242 -132722523 + (TATATG)n Simple_repeat Simple_repeat 2 35 0 257 291 27 9 chr10 7594755 7594865 -132721900 + HAL1 LINE L1 1744 1855 -652 1046 215 89 15 chr10 7594897 7595057 -132721708 + HAL1 LINE L1 2043 2190 -317 426 20 0 0 chr10 7595057 7595108 -132721657 + (TG)n Simple_repeat Simple_repeat 1 51 0 1046 215 89 15 chr10 7595108 7595272 -132721493 + HAL1 LINE L1 2190 2391 -116 24 0 0 0 chr10 7595304 7595328 -132721437 + AT_rich Low_complexity Low_complexity 1 24 0 466 261 76 53 chr10 7595558 7595657 -132721108 - L1ME1 LINE L1 0 6162 6067 679 159 0 0 chr10 7595657 7595764 -132721001 + U6 snRNA snRNA 1 107 0 1579 139 58 0 chr10 7595764 7596023 -132720742 + L1PB4 LINE L1 5880 6153 -3 466 261 76 53 chr10 7596023 7596315 -132720450 - L1ME1 LINE L1 -94 6068 5761 25 0 0 0 chr10 7598065 7598090 -132718675 + AT_rich Low_complexity Low_complexity 1 25 0 205 75 75 0 chr10 7598176 7598216 -132718549 + T-rich Low_complexity Low_complexity 4 46 0 792 181 181 16 chr10 7599481 7599669 -132717096 - MER20 DNA MER1_type 0 219 1 817 144 0 0 chr10 7599934 7600052 -132716713 - FLAM_C SINE Alu -22 121 4 2293 104 3 3 chr10 7600070 7600369 -132716396 - AluSq SINE Alu -14 299 1 222 241 0 19 chr10 7600591 7600645 -132716120 + CT-rich Low_complexity Low_complexity 4 56 0 264 30 0 0 chr10 7601021 7601054 -132715711 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 475 189 57 0 chr10 7602012 7602118 -132714647 + MIR SINE MIR 53 164 -98 2068 131 0 31 chr10 7602643 7602964 -132713801 - AluSx SINE Alu -1 311 1 686 214 0 0 chr10 7603475 7603592 -132713173 + FLAM_A SINE Alu 13 129 -13 213 119 0 0 chr10 7603615 7603657 -132713108 + (GA)n Simple_repeat Simple_repeat 2 43 0 320 283 82 61 chr10 7603657 7604194 -132712571 + L1ME LINE L1 5270 5829 -292 2176 152 17 6 chr10 7604581 7604942 -132711823 - MLT1A1 LTR MaLR 0 365 1 2266 110 0 3 chr10 7605322 7605622 -132711143 - AluSx SINE Alu -13 299 1 39 0 0 0 chr10 7605751 7605790 -132710975 + AT_rich Low_complexity Low_complexity 1 39 0 407 130 413 0 chr10 7605790 7605882 -132710883 - AluJo SINE Alu -176 136 7 22 0 0 0 chr10 7605882 7605904 -132710861 + AT_rich Low_complexity Low_complexity 1 22 0 1823 112 0 0 chr10 7607518 7607767 -132708998 + AluSx SINE Alu 64 312 0 2183 92 0 62 chr10 7608189 7608514 -132708251 + AluSq SINE Alu 1 305 -8 2057 133 18 33 chr10 7608593 7609090 -132707675 - L1MB7 LINE L1 -175 6009 2806 2388 178 71 11 chr10 7609303 7609769 -132706996 + MLT1D LTR MaLR 12 505 0 547 306 104 0 chr10 7609833 7610055 -132706710 + MIR SINE MIR 12 256 -6 3122 230 29 52 chr10 7610739 7612155 -132704610 - L1M4 LINE L1 -1053 5093 3813 2095 328 38 23 chr10 7612238 7613366 -132703399 - HERV16 LTR ERVL -1916 3080 2262 2069 126 11 3 chr10 7613615 7613901 -132702864 - AluSx SINE Alu -20 292 5 420 290 150 34 chr10 7614399 7614751 -132702014 + L1ME LINE L1 5378 5699 -463 244 308 0 0 chr10 7614784 7614862 -132701903 + L1ME LINE L1 5814 5891 -279 772 204 38 6 chr10 7614862 7615051 -132701714 - MLT1D LTR MaLR -4 545 311 512 197 33 40 chr10 7615120 7615272 -132701493 - MLT1D LTR MaLR -351 154 4 238 309 12 0 chr10 7615387 7615468 -132701297 + MLT1J LTR MaLR 120 201 -310 186 43 0 0 chr10 7615552 7615575 -132701190 + (A)n Simple_repeat Simple_repeat 1 23 0 3648 74 2 4 chr10 7616791 7617262 -132699503 - L1PA10 LINE L1 -8 6160 5691 244 354 0 0 chr10 7617326 7617439 -132699326 + CT-rich Low_complexity Low_complexity 5 117 0 183 42 0 0 chr10 7617807 7617831 -132698934 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 1678 146 13 73 chr10 7618052 7618367 -132698398 + AluJb SINE Alu 1 296 -16 1220 124 295 8 chr10 7618407 7618641 -132698124 + AluSq SINE Alu 2 302 -1 440 134 24 0 chr10 7618664 7618746 -132698019 + GA-rich Low_complexity Low_complexity 4 87 0 238 257 81 14 chr10 7618794 7618868 -132697897 - MIR3 SINE MIR -41 167 89 1432 107 65 0 chr10 7619048 7619264 -132697501 - MER30 DNA MER1_type 0 230 1 234 366 37 8 chr10 7619340 7619474 -132697291 + L2 LINE L2 3126 3263 -9 2349 82 3 0 chr10 7619809 7620102 -132696663 + AluSq SINE Alu 1 294 -19 2255 108 0 3 chr10 7620220 7620517 -132696248 - AluSc SINE Alu -13 296 1 774 84 0 0 chr10 7620906 7621013 -132695752 + (TCCC)n Simple_repeat Simple_repeat 4 110 0 1560 183 39 7 chr10 7621013 7621290 -132695475 - AluJo SINE Alu -23 289 1 256 24 49 0 chr10 7621862 7621903 -132694862 + (TA)n Simple_repeat Simple_repeat 1 43 0 1913 42 8 4 chr10 7621903 7622132 -132694633 - L1PA5 LINE L1 -5 6149 5917 433 82 16 0 chr10 7622132 7622193 -132694572 + L1PA5 LINE L1 5855 5916 -238 301 309 55 0 chr10 7622949 7623059 -132693706 - L2 LINE L2 0 3313 3198 797 284 120 12 chr10 7623714 7624055 -132692710 - LTR16C LTR ERVL -7 484 107 281 188 0 88 chr10 7624309 7624333 -132692432 - MLT1J1 LTR MaLR -22 424 399 2079 129 3 0 chr10 7624333 7624627 -132692138 + AluSx SINE Alu 1 295 -17 281 188 0 88 chr10 7624627 7624682 -132692083 - MLT1J1 LTR MaLR -47 399 352 2304 97 7 0 chr10 7625086 7625394 -132691371 + AluY SINE Alu 1 310 -1 24 32 0 0 chr10 7625621 7625652 -132691113 + AT_rich Low_complexity Low_complexity 1 31 0 388 287 70 0 chr10 7626737 7626866 -132689899 - MIR SINE MIR -31 231 94 649 135 8 71 chr10 7627189 7627315 -132689450 + FLAM_C SINE Alu 1 118 -15 396 278 0 0 chr10 7627426 7627534 -132689231 - MIR SINE MIR -66 196 89 1012 249 82 33 chr10 7627597 7627710 -132689055 + LTR40b LTR ERVL 73 179 -283 2027 188 5 5 chr10 7627710 7628094 -132688671 - L1PB4 LINE L1 -4 6152 5769 3895 122 27 42 chr10 7628094 7628759 -132688006 - L1PA13 LINE L1 0 6163 5509 1012 249 82 33 chr10 7628759 7629072 -132687693 + LTR40b LTR ERVL 178 462 0 276 338 0 0 chr10 7629072 7629152 -132687613 - MIR SINE MIR -171 91 12 189 382 24 18 chr10 7629164 7629329 -132687436 - L2 LINE L2 -188 3084 2919 1854 141 48 7 chr10 7629511 7629802 -132686963 + AluSx SINE Alu 1 303 -9 2185 86 7 30 chr10 7630343 7630645 -132686120 - AluSp SINE Alu 0 313 19 577 259 57 57 chr10 7630990 7631183 -132685582 + MLT1L LTR MaLR 24 216 -399 2152 140 7 0 chr10 7631456 7631763 -132685002 + AluSx SINE Alu 1 309 -3 688 136 0 19 chr10 7632714 7632817 -132683948 - Tigger7 DNA MER2_type 0 2487 2387 1435 224 11 0 chr10 7632818 7633082 -132683683 - Tigger7 DNA MER2_type -466 267 1 618 253 31 41 chr10 7633084 7633659 -132683106 - L1MCc LINE L1 -4795 2146 1263 890 139 0 8 chr10 7633883 7634012 -132682753 + AluJb SINE Alu 164 291 -21 285 266 87 49 chr10 7634427 7634611 -132682154 - L1MCc LINE L1 -6219 204 14 215 79 26 0 chr10 7634786 7634824 -132681941 + (TA)n Simple_repeat Simple_repeat 2 40 0 1801 143 68 0 chr10 7634833 7635126 -132681639 + AluSx SINE Alu 1 311 0 797 298 82 70 chr10 7635249 7635833 -132680932 + L1MC4a LINE L1 5311 5901 -1907 1748 167 7 24 chr10 7635994 7636287 -132680478 + AluJb SINE Alu 4 291 -21 269 201 0 170 chr10 7638215 7638396 -132678369 + Charlie7 DNA MER1_type 2451 2599 -13 1557 165 0 92 chr10 7638396 7638544 -132678221 + AluJo SINE Alu 6 109 -203 2203 117 7 0 chr10 7638544 7638844 -132677921 + AluSp SINE Alu 1 302 -11 1557 165 0 92 chr10 7638844 7639022 -132677743 + AluJo SINE Alu 109 302 -10 269 201 0 170 chr10 7639022 7639034 -132677731 + Charlie7 DNA MER1_type 2599 2611 -1 370 211 117 16 chr10 7639529 7639657 -132677108 - Charlie1 DNA MER1_type 0 2761 2621 2325 100 0 0 chr10 7641434 7641744 -132675021 - AluSx SINE Alu 0 312 3 356 297 97 26 chr10 7641847 7642002 -132674763 + MIR SINE MIR 20 185 -77 1615 142 64 28 chr10 7642119 7642401 -132674364 - AluJo SINE Alu -20 292 1 317 244 8 3 chr10 7642855 7642936 -132673829 - AluJ/FLAM SINE Alu -238 64 1 1751 158 44 10 chr10 7642966 7643264 -132673501 + AluJb SINE Alu 1 308 -4 270 0 0 0 chr10 7643530 7643560 -132673205 + (CA)n Simple_repeat Simple_repeat 2 31 0 1037 139 0 6 chr10 7644434 7644592 -132672173 + AluSg/x SINE Alu 130 286 -23 21 0 0 0 chr10 7644592 7644613 -132672152 + AT_rich Low_complexity Low_complexity 1 21 0 549 345 24 5 chr10 7644840 7645049 -132671716 + MIR SINE MIR 49 261 -1 274 238 83 0 chr10 7645087 7645171 -132671594 - MIR SINE MIR -50 212 122 2151 111 0 0 chr10 7646170 7646467 -132670298 - AluSg SINE Alu -13 297 1 255 61 0 0 chr10 7646769 7646802 -132669963 + (GAAA)n Simple_repeat Simple_repeat 1 33 0 1940 160 0 0 chr10 7647176 7647482 -132669283 + AluSx SINE Alu 1 306 -6 410 291 45 8 chr10 7647961 7648095 -132668670 + MIR SINE MIR 68 206 -56 2033 95 65 3 chr10 7648233 7648527 -132668238 + AluSx SINE Alu 1 312 0 197 264 226 9 chr10 7649909 7650015 -132666750 + MIR SINE MIR 84 212 -50 1762 149 7 19 chr10 7650361 7650670 -132666095 + AluJb SINE Alu 1 305 -7 2542 39 0 3 chr10 7651702 7652014 -132664751 - AluY SINE Alu 0 311 1 194 328 8 74 chr10 7652643 7652684 -132664081 + MIR3 SINE MIR 47 89 -119 2138 106 0 0 chr10 7652684 7652985 -132663780 + AluSx SINE Alu 5 305 -7 194 328 8 74 chr10 7652985 7653065 -132663700 + MIR3 SINE MIR 89 160 -48 574 244 144 12 chr10 7653065 7653225 -132663540 - MER5A DNA MER1_type 0 189 9 641 318 55 25 chr10 7653865 7653936 -132662829 + MIR SINE MIR 34 101 -161 415 95 24 83 chr10 7653936 7654020 -132662745 - MADE1 DNA Mariner -1 79 1 641 318 55 25 chr10 7654020 7654149 -132662616 + MIR SINE MIR 101 240 -22 2145 128 0 0 chr10 7654395 7654707 -132662058 + AluSx SINE Alu 1 312 0 1976 92 20 33 chr10 7654733 7655039 -132661726 + AluSx SINE Alu 2 303 -9 673 171 0 0 chr10 7655054 7655159 -132661606 + FLAM_A SINE Alu 23 127 -15 22 35 0 0 chr10 7655190 7655219 -132661546 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr10 7655585 7655610 -132661155 + AT_rich Low_complexity Low_complexity 1 25 0 963 300 101 31 chr10 7657633 7658380 -132658385 - L2 LINE L2 -2 3311 2513 206 157 0 39 chr10 7659478 7659529 -132657236 + CT-rich Low_complexity Low_complexity 3 51 0 311 270 114 28 chr10 7659987 7660055 -132656710 - MIR3 SINE MIR -40 222 161 2120 123 0 0 chr10 7660055 7660356 -132656409 - AluSg SINE Alu -9 301 1 311 270 114 28 chr10 7660356 7660498 -132656267 - MIR3 SINE MIR -101 161 5 875 165 6 19 chr10 7660537 7660695 -132656070 - FRAM SINE Alu -21 155 1 265 279 0 0 chr10 7661308 7661369 -132655396 + GA-rich Low_complexity Low_complexity 4 64 0 243 255 4 31 chr10 7661374 7661447 -132655318 - MIR3 SINE MIR -132 76 15 3473 84 24 0 chr10 7661647 7662101 -132654664 - Charlie3 DNA MER1_type -4 2706 2242 2950 107 34 2 chr10 7662086 7662498 -132654267 - Charlie3 DNA MER1_type -2199 511 87 * 509 284 47 30 chr10 7662515 7662684 -132654081 + MIR SINE MIR 63 234 -28 890 292 4 25 chr10 7662969 7663212 -132653553 + MIR SINE MIR 24 261 -1 450 280 106 24 chr10 7663673 7663802 -132652963 + L3 LINE CR1 1343 1497 -80 2119 113 30 88 chr10 7663802 7664200 -132652565 + THE1C LTR MaLR 1 375 0 450 280 106 24 chr10 7664200 7664277 -132652488 + L3 LINE CR1 1497 1566 -11 694 224 82 56 chr10 7664492 7664815 -132651950 + L2 LINE L2 2929 3307 -6 23 0 0 0 chr10 7665274 7665297 -132651468 + AT_rich Low_complexity Low_complexity 1 23 0 1778 157 7 0 chr10 7665805 7666092 -132650673 - AluJo SINE Alu -21 291 3 2124 111 0 29 chr10 7666752 7667067 -132649698 - AluSx SINE Alu -6 306 1 528 264 49 0 chr10 7667616 7667760 -132649005 - MIR3 SINE MIR -30 178 28 204 125 0 0 chr10 7671489 7671521 -132645244 + (CA)n Simple_repeat Simple_repeat 1 32 0 252 0 0 0 chr10 7671528 7671556 -132645209 + (A)n Simple_repeat Simple_repeat 1 28 0 235 167 14 28 chr10 7671623 7671695 -132645070 + (CGAG)n Simple_repeat Simple_repeat 2 72 0 200 206 0 0 chr10 7671864 7671898 -132644867 + A-rich Low_complexity Low_complexity 5 38 0 202 200 0 0 chr10 7672545 7672580 -132644185 + (TG)n Simple_repeat Simple_repeat 2 36 0 314 283 76 62 chr10 7676769 7676914 -132639851 + MIR3 SINE MIR 13 159 -49 21 0 0 0 chr10 7678483 7678504 -132638261 + AT_rich Low_complexity Low_complexity 1 21 0 874 189 17 0 chr10 7678518 7678698 -132638067 - L1MA4 LINE L1 -7 6293 6111 371 273 163 17 chr10 7678707 7678879 -132637886 - MIR SINE MIR -18 244 48 1827 142 3 0 chr10 7678949 7679260 -132637505 - AluSx SINE Alu 0 312 1 2266 102 0 0 chr10 7681466 7681770 -132634995 - AluSx SINE Alu -8 304 1 2345 74 3 13 chr10 7683089 7683400 -132633365 + AluSx SINE Alu 1 308 -4 3059 40 0 21 chr10 7685554 7685932 -132630833 - L1PA5 LINE L1 -1 6153 5784 435 283 72 32 chr10 7686218 7686357 -132630408 + HAL1 LINE L1 651 806 -1701 1871 109 6 45 chr10 7686357 7686668 -132630097 - AluSx SINE Alu -13 299 1 435 283 72 32 chr10 7686668 7686779 -132629986 + HAL1 LINE L1 806 911 -1596 836 216 180 41 chr10 7686795 7687212 -132629553 + HAL1 LINE L1 942 1416 -1091 920 280 140 36 chr10 7687229 7687325 -132629440 + HAL1 LINE L1 1486 1571 -936 1378 147 151 8 chr10 7687325 7687584 -132629181 - AluSg1 SINE Alu -13 296 1 920 280 140 36 chr10 7687584 7688008 -132628757 + HAL1 LINE L1 1571 2060 -447 261 287 61 93 chr10 7688126 7688373 -132628392 + HAL1 LINE L1 2267 2505 -2 1329 119 106 0 chr10 7688392 7688619 -132628146 + AluJb SINE Alu 51 301 -11 278 255 39 10 chr10 7688643 7688745 -132628020 - MLT1J LTR MaLR -7 504 400 355 275 218 26 chr10 7688843 7689036 -132627729 - MLT1J LTR MaLR -281 230 1 2037 112 7 3 chr10 7689290 7689584 -132627181 + AluSx SINE Alu 1 295 -17 470 91 13 0 chr10 7689585 7689662 -132627103 + (TA)n Simple_repeat Simple_repeat 1 78 0 314 279 211 32 chr10 7689765 7690073 -132626692 + L1ME4a LINE L1 5007 5369 -777 2173 95 3 0 chr10 7690091 7690386 -132626379 - AluSx SINE Alu -14 298 3 521 286 48 31 chr10 7690501 7690791 -132625974 + L1ME4a LINE L1 5590 5884 -237 2292 88 0 0 chr10 7691138 7691435 -132625330 - AluSg SINE Alu -13 297 1 207 69 0 0 chr10 7691494 7691523 -132625242 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 1986 119 0 0 chr10 7691525 7691803 -132624962 - AluSx SINE Alu -34 278 1 589 210 80 7 chr10 7692402 7692540 -132624225 - MER3 DNA MER1_type -24 185 38 282 308 60 17 chr10 7692821 7692938 -132623827 - MIR3 SINE MIR -6 202 81 678 131 10 0 chr10 7693949 7694048 -132622717 + AluSq/x SINE Alu 5 104 -208 961 150 6 12 chr10 7694221 7694388 -132622377 + AluSq SINE Alu 119 284 -29 405 0 0 0 chr10 7694388 7694433 -132622332 + (CAT)n Simple_repeat Simple_repeat 2 46 0 595 262 35 79 chr10 7694443 7694672 -132622093 + L2 LINE L2 3092 3310 -3 1942 107 7 58 chr10 7694797 7695107 -132621658 - AluSx SINE Alu -14 298 5 631 280 75 0 chr10 7695772 7695958 -132620807 + MIR SINE MIR 15 214 -48 1598 146 4 0 chr10 7696161 7696407 -132620358 - AluSx SINE Alu -39 273 27 2312 60 13 3 chr10 7696743 7697042 -132619723 - AluY SINE Alu -9 302 1 2354 99 0 0 chr10 7698518 7698831 -132617934 - AluSp SINE Alu 0 313 1 720 166 0 65 chr10 7699406 7699545 -132617220 - FLAM_A SINE Alu -3 130 1 2042 130 0 0 chr10 7700340 7700632 -132616133 - AluSx SINE Alu -20 292 1 237 250 0 0 chr10 7701159 7701207 -132615558 - MLT1I LTR MaLR -16 393 346 240 261 80 57 chr10 7701325 7701413 -132615352 - MLT1J LTR MaLR -312 199 110 563 51 26 0 chr10 7701641 7701719 -132615046 + (TATG)n Simple_repeat Simple_repeat 4 83 0 1574 198 7 0 chr10 7701719 7702002 -132614763 - AluJb SINE Alu -27 285 1 453 260 81 98 chr10 7703629 7703864 -132612901 - MIR SINE MIR -19 243 13 344 220 43 0 chr10 7703924 7704065 -132612700 + (CA)n Simple_repeat Simple_repeat 2 148 0 1959 256 59 24 chr10 7754743 7755318 -132561447 - MLT1G1 LTR MaLR 0 595 1 2216 98 0 3 chr10 7756618 7756903 -132559862 + AluSx SINE Alu 21 304 -8 2374 124 8 8 chr10 7760140 7760495 -132556270 - THE1A LTR MaLR 0 355 1 553 219 231 0 chr10 7760798 7760967 -132555798 + MIR SINE MIR 5 212 -50 410 103 19 159 chr10 7761176 7761250 -132555515 + MLT1C LTR MaLR 3 59 -408 2130 143 0 6 chr10 7761250 7761564 -132555201 - AluSx SINE Alu 0 312 1 410 103 19 159 chr10 7761564 7761596 -132555169 + MLT1C LTR MaLR 59 94 -373 1274 129 0 6 chr10 7761596 7761774 -132554991 + AluSg/x SINE Alu 118 294 -16 1335 195 96 9 chr10 7761774 7762108 -132554657 + MLT1C LTR MaLR 102 464 -3 351 323 63 24 chr10 7763344 7763763 -132553002 + MER113 DNA MER1_type? 2 471 -50 1436 107 4 36 chr10 7765598 7765828 -132550937 - L1P LINE L1 -1275 4871 4648 1257 65 24 0 chr10 7765828 7765994 -132550771 + L1PA8 LINE L1 5997 6168 -4 1436 107 4 36 chr10 7765994 7766016 -132550749 - L1P LINE L1 -1498 4648 4627 685 153 0 0 chr10 7766262 7766360 -132550405 - AluS SINE Alu -214 99 2 2185 134 0 0 chr10 7766510 7766815 -132549950 - AluSx SINE Alu -6 306 2 2123 98 33 0 chr10 7767434 7767746 -132549019 - AluSq SINE Alu 0 321 1 200 288 0 17 chr10 7768642 7768701 -132548064 + GA-rich Low_complexity Low_complexity 3 60 0 192 77 0 0 chr10 7768702 7768728 -132548037 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 883 181 7 13 chr10 7768741 7768896 -132547869 + FRAM SINE Alu 6 159 -17 2373 113 0 0 chr10 7769017 7769327 -132547438 - AluSx SINE Alu -2 310 1 1942 193 33 0 chr10 7769400 7769737 -132547028 - MER7A DNA MER2_type 0 346 1 2538 52 0 3 chr10 7769877 7770182 -132546583 + AluY SINE Alu 1 304 -7 2169 110 3 10 chr10 7770191 7770499 -132546266 + AluSc SINE Alu 1 306 -3 4196 135 34 1 chr10 7771750 7772404 -132544361 - L1PA15 LINE L1 -2 6163 5489 242 139 0 0 chr10 7772627 7772663 -132544102 - MER58 DNA MER1_type -2 2418 2383 2108 116 20 0 chr10 7773387 7773681 -132543084 + AluSx SINE Alu 7 306 -6 631 321 102 42 chr10 7773906 7774572 -132542193 + L1MEd LINE L1 26 731 -5388 1764 52 5 5 chr10 7774620 7774832 -132541933 + AluY SINE Alu 1 212 -99 2353 122 0 3 chr10 7775332 7775643 -132541122 - AluSx SINE Alu -2 310 1 930 213 22 0 chr10 7775736 7775919 -132540846 + MER7A DNA MER2_type 1 185 -161 246 302 32 0 chr10 7776308 7776371 -132540394 + MIR SINE MIR 70 134 -74 193 214 36 18 chr10 7776383 7776439 -132540326 + L2 LINE L2 3220 3276 -37 277 279 0 10 chr10 7777829 7777933 -132538832 + G-rich Low_complexity Low_complexity 5 107 0 2203 115 0 0 chr10 7778802 7779097 -132537668 - AluSc SINE Alu -14 295 1 454 271 56 124 chr10 7779409 7779748 -132537017 + L2 LINE L2 2858 3162 -110 2169 124 0 0 chr10 7779748 7780069 -132536696 - AluSc SINE Alu 0 309 3 454 271 56 124 chr10 7780069 7780172 -132536593 + L2 LINE L2 3162 3270 -2 226 124 56 34 chr10 7780317 7780406 -132536359 + (CAGAGA)n Simple_repeat Simple_repeat 4 94 0 387 282 132 80 chr10 7781434 7781995 -132534770 + L1M2 LINE L1 535 1124 -5725 234 294 11 76 chr10 7782583 7782675 -132534090 + L3b LINE CR1 1398 1483 -100 1018 133 0 19 chr10 7783205 7783363 -132533402 + FRAM SINE Alu 22 176 0 2138 97 0 7 chr10 7783838 7784117 -132532648 + AluSc SINE Alu 1 277 -32 243 61 0 0 chr10 7784117 7784150 -132532615 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 2038 121 10 20 chr10 7784871 7785176 -132531589 + AluSx SINE Alu 1 302 -10 23 54 0 0 chr10 7786314 7786351 -132530414 + AT_rich Low_complexity Low_complexity 1 37 0 26 0 0 0 chr10 7786655 7786681 -132530084 + AT_rich Low_complexity Low_complexity 1 26 0 1359 174 5 0 chr10 7789515 7789739 -132527026 - AluJo SINE Alu -3 309 85 1892 160 0 17 chr10 7789955 7790248 -132526517 - AluJb SINE Alu -19 293 6 24 32 0 0 chr10 7790988 7791019 -132525746 + AT_rich Low_complexity Low_complexity 1 31 0 1759 190 5 42 chr10 7791183 7791402 -132525363 - MLT1A1 LTR MaLR 0 365 139 195 69 0 0 chr10 7791402 7791431 -132525334 + (TTTTG)n Simple_repeat Simple_repeat 1 29 0 2089 112 0 4 chr10 7791431 7791708 -132525057 - AluSc SINE Alu -33 276 1 1759 190 5 42 chr10 7791708 7791866 -132524899 - MLT1A1 LTR MaLR -224 141 1 255 212 59 59 chr10 7792406 7792491 -132524274 + MIR SINE MIR 52 136 -72 21 0 0 0 chr10 7792664 7792685 -132524080 + AT_rich Low_complexity Low_complexity 1 21 0 331 247 0 72 chr10 7795970 7796067 -132520698 + L1MC4 LINE L1 6614 6703 -1339 182 125 0 50 chr10 7796077 7796117 -132520648 + (CATATA)n Simple_repeat Simple_repeat 5 42 0 329 274 48 0 chr10 7796122 7796206 -132520559 - L1MC4 LINE L1 -1340 6702 6615 521 189 11 28 chr10 7796240 7796420 -132520345 + (CATA)n Simple_repeat Simple_repeat 2 178 0 318 297 11 22 chr10 7796426 7796517 -132520248 + L1MC4 LINE L1 6614 6703 -1339 224 163 0 23 chr10 7796517 7796560 -132520205 + (CATATA)n Simple_repeat Simple_repeat 1 42 0 313 264 23 11 chr10 7796565 7796652 -132520113 + L1MC4 LINE L1 6615 6702 -1340 326 217 33 65 chr10 7796666 7796758 -132520007 - L1MC4 LINE L1 -1340 6702 6614 318 192 10 144 chr10 7796671 7796775 -132519990 + L1MC4 LINE L1 6614 6703 -1339 * 210 136 34 17 chr10 7796779 7796838 -132519927 + (CATATA)n Simple_repeat Simple_repeat 6 65 0 323 176 0 137 chr10 7796881 7796983 -132519782 + L1MC4 LINE L1 6616 6703 -1339 195 129 0 0 chr10 7796983 7797014 -132519751 + (CATA)n Simple_repeat Simple_repeat 2 32 0 1673 160 29 13 chr10 7797568 7797861 -132518904 + AluJo SINE Alu 1 302 -10 1284 44 0 22 chr10 7797861 7798044 -132518721 + (GAA)n Simple_repeat Simple_repeat 2 180 0 1673 160 29 13 chr10 7798044 7798056 -132518709 + AluJo SINE Alu 302 312 0 240 59 0 0 chr10 7798442 7798476 -132518289 + (TTA)n Simple_repeat Simple_repeat 3 36 0 2085 71 0 4 chr10 7798477 7798746 -132518019 - L1PA5 LINE L1 -16 6138 5871 873 151 0 0 chr10 7798871 7799010 -132517755 + AluSg/x SINE Alu 155 293 -17 292 256 47 23 chr10 7799013 7799099 -132517666 + MIR SINE MIR 116 203 -59 2307 92 0 6 chr10 7800128 7800442 -132516323 - AluSq SINE Alu -1 312 1 329 303 96 34 chr10 7800498 7800676 -132516089 - MIR SINE MIR -71 191 3 317 322 109 12 chr10 7800944 7801154 -132515611 - MIR SINE MIR -11 251 21 2079 113 7 0 chr10 7801742 7802044 -132514721 - AluJo SINE Alu -8 304 1 1621 176 25 67 chr10 7802388 7802530 -132514235 + MER2 DNA MER2_type 1 147 -197 2226 113 0 0 chr10 7802530 7802840 -132513925 - AluSx SINE Alu -2 310 1 1621 176 25 67 chr10 7802840 7803056 -132513709 + MER2 DNA MER2_type 147 344 0 2218 114 0 0 chr10 7803895 7804201 -132512564 - AluSq SINE Alu -7 306 1 1839 147 6 28 chr10 7804508 7804827 -132511938 + AluJo SINE Alu 1 312 0 817 140 26 72 chr10 7804967 7805153 -132511612 + L1MB2 LINE L1 5987 6177 -12 27 0 0 0 chr10 7805550 7805577 -132511188 + AT_rich Low_complexity Low_complexity 1 27 0 2400 73 0 6 chr10 7805635 7805948 -132510817 + AluY SINE Alu 1 311 0 399 258 25 50 chr10 7806332 7806452 -132510313 - MIR SINE MIR -73 189 73 1637 161 17 14 chr10 7807155 7807447 -132509318 - AluJo SINE Alu -19 293 1 1118 337 94 18 chr10 7808208 7808822 -132507943 - L3 LINE CR1 -5 1572 912 453 275 19 16 chr10 7808831 7808999 -132507766 + MIR SINE MIR 30 195 -13 816 277 113 12 chr10 7809029 7809365 -132507400 + MLT1J LTR MaLR 87 456 -55 269 292 135 0 chr10 7809407 7809503 -132507262 + MIR SINE MIR 150 258 -4 330 301 45 85 chr10 7809854 7810100 -132506665 - L3 LINE CR1 -825 752 517 330 292 96 78 chr10 7810489 7810641 -132506124 - MIR SINE MIR -15 247 88 2217 100 3 0 chr10 7810641 7810940 -132505825 + AluSp SINE Alu 1 300 -13 330 292 96 78 chr10 7810940 7811006 -132505759 - MIR SINE MIR -174 88 25 2165 106 3 0 chr10 7811524 7811817 -132504948 - AluSx SINE Alu -18 294 1 1256 107 0 0 chr10 7812376 7812544 -132504221 + AluSx SINE Alu 1 168 -144 819 158 92 30 chr10 7812644 7812808 -132503957 - MER1B DNA MER1_type -85 212 39 1635 156 7 24 chr10 7812852 7813147 -132503618 - AluJb SINE Alu -22 290 1 200 299 45 45 chr10 7813787 7813854 -132502911 - L2 LINE L2 -5 3308 3242 189 0 0 0 chr10 7813998 7814019 -132502746 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 353 355 24 8 chr10 7814019 7814143 -132502622 - L2 LINE L2 -13 3259 3134 366 245 136 32 chr10 7815199 7815354 -132501411 - L1ME4a LINE L1 -57 6064 5894 1422 103 0 19 chr10 7815420 7815633 -132501132 - L1MA2 LINE L1 0 6304 6096 252 59 0 0 chr10 7816525 7816559 -132500206 + (TG)n Simple_repeat Simple_repeat 1 34 0 216 0 0 0 chr10 7816559 7816583 -132500182 + (GA)n Simple_repeat Simple_repeat 1 24 0 1624 236 6 17 chr10 7816583 7816943 -132499822 - MLT2D LTR ERVL -57 357 2 1319 175 0 0 chr10 7817725 7817948 -132498817 - AluJb SINE Alu -18 294 72 1486 165 0 0 chr10 7817957 7818199 -132498566 - AluJb SINE Alu -52 260 19 277 157 0 0 chr10 7818308 7818384 -132498381 + Alu SINE Alu 247 322 0 642 200 74 0 chr10 7818616 7818751 -132498014 + L1ME3A LINE L1 6011 6155 -15 1060 90 0 0 chr10 7818811 7818944 -132497821 - FLAM_C SINE Alu 0 133 1 2067 102 7 7 chr10 7818953 7819256 -132497509 - AluSg SINE Alu -7 303 1 379 209 100 0 chr10 7819544 7819654 -132497111 - L1MB7 LINE L1 0 6184 6064 3400 112 23 6 chr10 7819702 7820222 -132496543 + L1MA3 LINE L1 5777 6305 0 1946 141 0 3 chr10 7820411 7820716 -132496049 - AluSx SINE Alu -8 304 1 670 222 250 28 chr10 7821027 7821239 -132495526 - MIR SINE MIR 0 262 4 2349 78 7 3 chr10 7821378 7821687 -132495078 - AluSx SINE Alu -2 310 1 245 339 51 8 chr10 7821779 7821897 -132494868 - L2 LINE L2 -4 3309 3187 186 71 0 0 chr10 7822908 7822936 -132493829 + (A)n Simple_repeat Simple_repeat 1 28 0 239 308 105 119 chr10 7823382 7823752 -132493013 + L2 LINE L2 2908 3272 0 2131 110 3 0 chr10 7823912 7824212 -132492553 - AluSx SINE Alu -11 301 1 573 225 38 127 chr10 7824533 7824800 -132491965 + MIR SINE MIR 20 262 0 292 205 121 12 chr10 7825133 7825216 -132491549 + MER3 DNA MER1_type 118 209 0 530 329 26 9 chr10 7825225 7825453 -132491312 - L1ME LINE L1 -345 5776 5545 21 36 0 0 chr10 7825527 7825555 -132491210 + AT_rich Low_complexity Low_complexity 1 28 0 432 280 72 28 chr10 7825714 7825910 -132490855 + L1M4 LINE L1 5221 5420 -748 266 280 224 32 chr10 7826200 7826325 -132490440 - MIR SINE MIR -74 188 40 279 79 0 0 chr10 7827382 7827420 -132489345 + (A)n Simple_repeat Simple_repeat 1 38 0 529 333 45 10 chr10 7828214 7828412 -132488353 - MIR SINE MIR -17 245 41 1915 133 0 10 chr10 7828886 7829188 -132487577 + AluJo SINE Alu 1 299 -13 272 203 34 0 chr10 7829577 7829636 -132487129 - MER58 DNA MER1_type -5 2415 2355 2147 100 3 3 chr10 7829636 7829937 -132486828 - AluSq SINE Alu -12 301 1 854 155 8 0 chr10 7829975 7830104 -132486661 - FLAM_C SINE Alu -3 130 1 24 67 0 0 chr10 7831000 7831045 -132485720 + AT_rich Low_complexity Low_complexity 1 45 0 1794 114 4 14 chr10 7831172 7831452 -132485313 - AluSx SINE Alu 0 312 36 206 296 151 45 chr10 7831452 7831631 -132485134 + L2 LINE L2 2068 2265 -1049 648 70 0 0 chr10 7831829 7831915 -132484850 + (TA)n Simple_repeat Simple_repeat 2 87 0 240 240 0 0 chr10 7832728 7832778 -132483987 - L2 LINE L2 0 3313 3264 2217 88 0 7 chr10 7833028 7833336 -132483429 + AluSc SINE Alu 1 306 -3 212 130 0 43 chr10 7834938 7834971 -132481794 + (TC)n Simple_repeat Simple_repeat 2 34 -11 1516 181 0 27 chr10 7834971 7835264 -132481501 - AluJb SINE Alu -27 285 1 212 130 0 43 chr10 7835264 7835276 -132481489 + (TC)n Simple_repeat Simple_repeat 34 45 0 360 309 18 0 chr10 7836174 7836284 -132480481 + L1MEd LINE L1 647 758 -5447 243 267 76 10 chr10 7836313 7836464 -132480301 + L1MEd LINE L1 1586 1912 -4304 1534 108 31 9 chr10 7836624 7836847 -132479918 - MER30 DNA MER1_type 0 230 3 2150 101 3 13 chr10 7837220 7837527 -132479238 + AluSq SINE Alu 1 304 -9 2036 115 3 0 chr10 7838800 7839096 -132477669 + AluSx SINE Alu 1 297 -15 858 209 78 57 chr10 7839754 7840175 -132476590 - L1MC5 LINE L1 -54 7907 7478 1531 171 60 17 chr10 7840224 7840523 -132476242 - AluJo SINE Alu 0 312 1 260 330 157 30 chr10 7840923 7841153 -132475612 + L3b LINE CR1 1249 1507 -76 558 308 122 9 chr10 7841520 7841734 -132475031 + MIR SINE MIR 6 243 -19 1750 149 66 30 chr10 7841753 7842115 -132474650 - THE1C LTR MaLR 0 375 1 2011 79 25 11 chr10 7842149 7842429 -132474336 + AluSq SINE Alu 1 284 -29 858 307 39 17 chr10 7842501 7842856 -132473909 + L1ME3 LINE L1 5795 6157 -5 294 284 94 0 chr10 7842993 7843120 -132473645 + L3 LINE CR1 1284 1422 -155 909 186 12 0 chr10 7843184 7843345 -132473420 + MER5A DNA MER1_type 2 164 -25 394 345 54 7 chr10 7844574 7844722 -132472043 + MIR SINE MIR 102 256 -6 2432 63 0 0 chr10 7845776 7846079 -132470686 + AluY SINE Alu 1 303 -8 2181 94 3 0 chr10 7846480 7846778 -132469987 + AluSp SINE Alu 1 299 -14 1596 114 121 11 chr10 7846790 7847054 -132469711 + AluSg1 SINE Alu 1 293 -16 281 206 0 22 chr10 7847073 7847165 -132469600 + L1MC4 LINE L1 6614 6703 -1339 1785 187 15 75 chr10 7847389 7847738 -132469027 + L1MB2 LINE L1 5779 6105 -66 2010 142 3 0 chr10 7847738 7848051 -132468714 + AluSx SINE Alu 1 314 0 1785 187 15 75 chr10 7848051 7848108 -132468657 + L1MB2 LINE L1 6105 6164 -7 837 186 132 0 chr10 7848884 7849051 -132467714 + MER53 DNA DNA 1 189 0 197 338 0 15 chr10 7849249 7849317 -132467448 - L2 LINE L2 -5 3267 3201 1428 45 6 0 chr10 7849391 7849570 -132467195 + L1PA8 LINE L1 5993 6172 0 180 0 0 0 chr10 7849584 7849604 -132467161 + (A)n Simple_repeat Simple_repeat 1 20 0 1878 163 9 34 chr10 7850045 7850081 -132466684 - L1MB5 LINE L1 -6 6168 6133 2396 90 0 10 chr10 7850081 7850393 -132466372 - AluSg SINE Alu -1 309 1 1878 163 9 34 chr10 7850393 7850705 -132466060 - L1MB5 LINE L1 -41 6133 5829 1066 200 19 0 chr10 7851618 7851828 -132464937 - L1MB5 LINE L1 -323 5851 5638 289 197 28 0 chr10 7852148 7852219 -132464546 - L1MB7 LINE L1 0 6184 6112 1657 176 59 7 chr10 7852380 7852794 -132463971 - L1MB5 LINE L1 -577 5603 5164 529 235 35 35 chr10 7853116 7853286 -132463479 - MER5B DNA MER1_type -8 170 1 2068 129 0 39 chr10 7853782 7854091 -132462674 - AluSx SINE Alu -15 297 1 202 308 0 0 chr10 7854177 7854242 -132462523 - MER5B DNA MER1_type -1 177 113 922 251 26 17 chr10 7854242 7854473 -132462292 + L1MB8 LINE L1 5945 6177 -1 451 277 29 78 chr10 7855508 7855750 -132461015 + MIR SINE MIR 6 235 -27 2727 45 0 0 chr10 7855800 7856111 -132460654 + AluY SINE Alu 1 311 0 741 149 75 15 chr10 7856946 7857080 -132459685 - FLAM_C SINE Alu 0 143 2 219 310 58 11 chr10 7857102 7857189 -132459576 - L2 LINE L2 -15 3257 3167 290 282 73 29 chr10 7858538 7858715 -132458050 - L1ME LINE L1 -339 5782 5599 26 0 0 0 chr10 7858737 7858763 -132458002 + AT_rich Low_complexity Low_complexity 1 26 0 2346 65 17 0 chr10 7858764 7859056 -132457709 + AluSg SINE Alu 1 297 -13 545 258 128 16 chr10 7860312 7860734 -132456031 + HAL1 LINE L1 1304 1809 -698 499 264 103 0 chr10 7860767 7860922 -132455843 + HsTC2 DNA Tc2 4 174 -1724 2085 197 64 34 chr10 7861088 7861556 -132455209 - LTR65 LTR ERV1 -20 649 168 207 0 0 0 chr10 7862141 7862164 -132454601 + (A)n Simple_repeat Simple_repeat 1 23 0 1905 151 3 44 chr10 7862173 7862490 -132454275 + AluJo SINE Alu 1 304 -8 207 204 0 0 chr10 7863525 7863569 -132453196 + GA-rich Low_complexity Low_complexity 1 44 0 710 141 8 0 chr10 7863596 7863724 -132453041 + GA-rich Low_complexity Low_complexity 4 132 0 180 125 0 0 chr10 7863742 7863774 -132452991 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 1269 183 23 108 chr10 7864907 7865317 -132451448 + MLT1A2 LTR MaLR 1 374 0 255 348 90 7 chr10 7865348 7865503 -132451262 - MIR SINE MIR -94 168 1 1994 145 10 0 chr10 7865950 7866239 -132450526 + AluSx SINE Alu 1 292 -20 515 105 0 84 chr10 7866239 7866430 -132450335 + (TA)n Simple_repeat Simple_repeat 2 176 0 413 87 43 71 chr10 7866531 7866715 -132450050 + (CATAT)n Simple_repeat Simple_repeat 2 180 0 * 690 73 0 78 chr10 7866673 7866864 -132449901 + (TA)n Simple_repeat Simple_repeat 2 177 0 888 173 52 0 chr10 7867233 7867406 -132449359 + MER5A DNA MER1_type 2 183 -6 578 205 7 66 chr10 7868383 7868580 -132448185 - MLT1G1 LTR MaLR 0 567 418 758 200 190 5 chr10 7868720 7868920 -132447845 - MLT1G1 LTR MaLR -357 238 2 311 177 0 64 chr10 7868924 7869015 -132447750 - L1P4 LINE L1 -329 5839 5753 618 120 22 11 chr10 7869123 7869215 -132447550 + MER58A DNA MER1_type 42 134 0 875 237 69 0 chr10 7869235 7869480 -132447285 + MLT1H1 LTR MaLR 294 555 0 264 179 0 0 chr10 7869480 7869518 -132447247 + Charlie8 DNA MER1_type 1378 1415 -1002 2174 87 30 33 chr10 7869853 7870152 -132446613 + AluY SINE Alu 1 298 -13 525 154 34 34 chr10 7871049 7871224 -132445541 + CT-rich Low_complexity Low_complexity 3 177 0 492 62 0 0 chr10 7871388 7871452 -132445313 + (TAGA)n Simple_repeat Simple_repeat 3 66 0 185 267 0 50 chr10 7872202 7872262 -132444503 - MIR3 SINE MIR -24 184 128 2259 111 3 3 chr10 7872345 7872643 -132444122 + AluSq SINE Alu 1 298 -15 1797 224 60 47 chr10 7872992 7873193 -132443572 + MER74B LTR ERVL 56 253 -369 1892 110 3 81 chr10 7873193 7873533 -132443232 + AluSx SINE Alu 1 316 0 1797 224 60 47 chr10 7873533 7873880 -132442885 + MER74B LTR ERVL 253 612 -10 245 284 7 54 chr10 7874706 7874854 -132441911 + L1ME4a LINE L1 5258 5398 -893 345 268 92 1 chr10 7874890 7875040 -132441725 + L1ME4a LINE L1 5386 5549 -613 2153 118 0 3 chr10 7875111 7875398 -132441367 - AluSx SINE Alu -25 287 2 482 218 81 24 chr10 7875783 7875907 -132440858 + MIR SINE MIR 12 142 -120 2167 106 0 7 chr10 7875937 7876219 -132440546 + AluSq SINE Alu 1 280 -33 1887 231 67 8 chr10 7876389 7876879 -132439886 + LTR40a LTR ERVL 1 519 0 22 0 0 0 chr10 7877021 7877043 -132439722 + AT_rich Low_complexity Low_complexity 1 22 0 1805 170 0 3 chr10 7878291 7878580 -132438185 - AluJo SINE Alu -24 288 1 22 56 0 0 chr10 7878585 7878621 -132438144 + AT_rich Low_complexity Low_complexity 1 36 0 267 244 13 13 chr10 7878709 7878787 -132437978 + L1ME4a LINE L1 5531 5608 -513 2425 76 7 0 chr10 7878805 7879106 -132437659 - AluSg SINE Alu -7 303 1 2234 92 3 20 chr10 7879106 7879411 -132437354 - AluSc SINE Alu -9 300 1 502 101 0 0 chr10 7879413 7879482 -132437283 - L1ME LINE L1 -565 5601 5533 903 280 92 30 chr10 7879741 7880109 -132436656 + MLT1I LTR MaLR 17 407 -2 291 254 0 0 chr10 7880109 7880180 -132436585 + L1ME4a LINE L1 5856 5926 -195 3075 118 53 45 chr10 7880501 7881107 -132435658 - MER4B LTR ERV1 0 779 1 2099 137 0 7 chr10 7881159 7881458 -132435307 + AluSx SINE Alu 1 297 -15 28 0 0 0 chr10 7881465 7881493 -132435272 + AT_rich Low_complexity Low_complexity 1 28 0 1728 174 30 21 chr10 7882972 7883306 -132433459 + MER1B DNA MER1_type 1 337 0 1893 142 0 23 chr10 7883766 7884068 -132432697 - AluJb SINE Alu -17 295 1 2209 101 11 0 chr10 7884146 7884432 -132432333 + AluSx SINE Alu 5 293 -19 267 237 172 0 chr10 7885390 7885483 -132431282 - MIR SINE MIR -6 256 148 256 204 74 0 chr10 7885503 7885557 -132431208 + MER69 DNA AcHobo 10 67 -2459 916 179 11 16 chr10 7885565 7885749 -132431016 + MER69 DNA AcHobo 2344 2526 0 617 234 0 0 chr10 7885749 7885886 -132430879 - MIR SINE MIR -92 170 34 2094 141 0 0 chr10 7886184 7886482 -132430283 + AluSx SINE Alu 1 298 -14 308 287 193 7 chr10 7886484 7886634 -132430131 + MER5A DNA MER1_type 12 189 0 429 237 192 5 chr10 7886881 7887079 -132429686 - MIR SINE MIR -17 245 11 439 272 130 24 chr10 7887461 7887678 -132429087 - MIR SINE MIR -28 234 1 22 70 0 0 chr10 7888800 7888843 -132427922 + GC_rich Low_complexity Low_complexity 1 43 0 194 351 0 0 chr10 7891184 7891241 -132425524 - L3b LINE CR1 -8 1575 1519 290 360 40 0 chr10 7892115 7892265 -132424500 + L2 LINE L2 3116 3271 -1 1496 156 113 11 chr10 7892787 7893069 -132423696 - AluSx SINE Alu -1 311 1 639 221 16 0 chr10 7893300 7893427 -132423338 + FLAM_A SINE Alu 10 138 -4 525 183 12 37 chr10 7893427 7893591 -132423174 + GA-rich Low_complexity Low_complexity 1 160 0 234 89 0 44 chr10 7893700 7893745 -132423020 + (GGGA)n Simple_repeat Simple_repeat 2 44 0 207 147 0 59 chr10 7893743 7893811 -132422954 + (GAAA)n Simple_repeat Simple_repeat 1 64 0 * 545 299 19 38 chr10 7894097 7894308 -132422457 + L1MC4a LINE L1 5576 5782 -2026 552 227 89 35 chr10 7894565 7894768 -132421997 + L1MC4a LINE L1 5787 6000 -1808 336 48 0 0 chr10 7894966 7895008 -132421757 + (GGA)n Simple_repeat Simple_repeat 2 43 0 351 0 0 0 chr10 7895148 7895187 -132421578 + (CA)n Simple_repeat Simple_repeat 1 39 0 2067 96 7 31 chr10 7895445 7895774 -132420991 - AluSc SINE Alu 0 323 2 2425 83 3 0 chr10 7896842 7897142 -132419623 - AluY SINE Alu -10 301 1 926 203 56 107 chr10 7897760 7898214 -132418551 + MLT1A2 LTR MaLR 1 370 -4 4190 185 22 83 chr10 7898461 7898653 -132418112 + L1MD2 LINE L1 5093 5295 -1064 2285 93 0 17 chr10 7898653 7898953 -132417812 + AluSq SINE Alu 1 295 -18 4190 185 22 83 chr10 7898953 7899400 -132417365 + L1MD2 LINE L1 5295 5767 -592 1758 166 14 0 chr10 7899400 7899684 -132417081 - AluJo SINE Alu -19 293 6 4190 185 22 83 chr10 7899684 7899895 -132416870 + L1MD2 LINE L1 5767 5989 -370 2047 119 0 58 chr10 7899895 7900223 -132416542 + AluSg SINE Alu 2 310 0 4190 185 22 83 chr10 7900223 7900484 -132416281 + L1MD2 LINE L1 5989 6152 -207 339 25 0 0 chr10 7900484 7900524 -132416241 + (CA)n Simple_repeat Simple_repeat 1 40 0 4190 185 22 83 chr10 7900524 7900719 -132416046 + L1MD2 LINE L1 6152 6357 -2 1225 163 37 20 chr10 7900838 7901083 -132415682 - MLT2D LTR ERVL -165 249 1 1520 97 5 7 chr10 7901155 7901509 -132415256 - MSTA LTR MaLR 0 428 1 458 164 0 0 chr10 7901671 7901744 -132415021 + L1MB5 LINE L1 6069 6141 -33 1985 112 14 20 chr10 7901749 7902044 -132414721 + AluSx SINE Alu 3 295 -17 24 32 0 0 chr10 7902050 7902081 -132414684 + AT_rich Low_complexity Low_complexity 1 31 0 826 204 42 11 chr10 7902647 7902838 -132413927 - MIR SINE MIR 0 262 66 1350 195 101 0 chr10 7903022 7903471 -132413294 + AluJo SINE Alu 5 480 0 752 144 6 24 chr10 7903487 7903654 -132413111 + GA-rich Low_complexity Low_complexity 1 164 0 507 28 0 28 chr10 7903756 7903828 -132412937 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 8684 179 41 14 chr10 7903833 7904860 -132411905 + L1PA16 LINE L1 3343 4340 -1826 237 33 0 0 chr10 7904860 7904890 -132411875 + (CA)n Simple_repeat Simple_repeat 1 30 0 8684 179 41 14 chr10 7904890 7906614 -132410151 + L1PA16 LINE L1 4340 6165 -1 1841 94 102 0 chr10 7906774 7907053 -132409712 + AluSx SINE Alu 1 305 0 331 277 34 20 chr10 7907270 7907418 -132409347 + L1MC5 LINE L1 7636 7785 -176 1633 175 11 3 chr10 7907420 7907705 -132409060 + AluJo SINE Alu 1 287 -25 29 28 0 0 chr10 7907706 7907742 -132409023 + AT_rich Low_complexity Low_complexity 1 36 0 195 358 51 12 chr10 7907839 7908017 -132408748 + L2 LINE L2 2852 3037 -276 856 244 105 4 chr10 7908291 7908529 -132408236 - MIR SINE MIR 0 262 1 1584 92 30 0 chr10 7909452 7909794 -132406971 + L1P4 LINE L1 5141 5489 -685 315 141 0 2 chr10 7909796 7910041 -132406724 + AluSx SINE Alu 1 298 -4 5780 71 0 4 chr10 7910041 7910743 -132406022 + L1PA11 LINE L1 5476 6174 0 1180 254 76 25 chr10 7910949 7911330 -132405435 + MLT1I LTR MaLR 13 409 0 1352 245 82 18 chr10 7911618 7912066 -132404699 - MER20B DNA MER1_type 0 783 307 1527 226 74 6 chr10 7912066 7912206 -132404559 + MLT1A2 LTR MaLR 1 130 -244 2178 97 0 3 chr10 7912206 7912495 -132404270 + AluY SINE Alu 23 310 -1 1527 226 74 6 chr10 7912495 7912690 -132404075 + MLT1A2 LTR MaLR 130 359 -15 680 273 59 52 chr10 7912701 7912810 -132403955 - MER20B DNA MER1_type -472 311 204 2401 111 47 39 chr10 7912810 7913171 -132403594 - THE1B LTR MaLR 0 364 1 12139 104 10 1 chr10 7913171 7914737 -132402028 - THE1B-int LTR MaLR 0 1580 1 2273 123 53 34 chr10 7914737 7915094 -132401671 - THE1B LTR MaLR 0 364 1 680 273 59 52 chr10 7915094 7915268 -132401497 - MER20B DNA MER1_type -578 205 24 3763 206 76 52 chr10 7915392 7915758 -132401007 - Tigger6a DNA MER2_type -519 1078 723 378 0 0 0 chr10 7915758 7915800 -132400965 + (TG)n Simple_repeat Simple_repeat 2 43 0 3763 206 76 52 chr10 7915800 7916482 -132400283 - Tigger6a DNA MER2_type -874 723 4 2510 78 0 0 chr10 7916664 7916970 -132399795 - AluY SINE Alu -5 306 1 2258 84 3 0 chr10 7917415 7917701 -132399064 + AluSp SINE Alu 2 288 -25 1308 154 70 40 chr10 7917722 7917994 -132398771 - AluJo SINE Alu -30 282 3 273 260 30 20 chr10 7918930 7919030 -132397735 - L2 LINE L2 -1 3312 3212 52 64 0 0 chr10 7919554 7919648 -132397117 + AT_rich Low_complexity Low_complexity 1 94 0 2097 121 0 23 chr10 7919669 7919976 -132396789 - AluSx SINE Alu -12 300 1 21 0 0 0 chr10 7920064 7920085 -132396680 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 7920184 7920207 -132396558 + AT_rich Low_complexity Low_complexity 1 23 0 255 295 0 26 chr10 7920402 7920480 -132396285 - L2 LINE L2 -1 3312 3237 1735 172 0 10 chr10 7920718 7921009 -132395756 - AluJb SINE Alu -24 288 1 229 148 19 37 chr10 7921184 7921238 -132395527 + C-rich Low_complexity Low_complexity 4 56 0 244 341 161 0 chr10 7921682 7921887 -132394878 - L2 LINE L2 -480 2834 2597 2410 72 7 3 chr10 7921990 7922294 -132394471 + AluSq SINE Alu 1 305 -8 2133 103 3 0 chr10 7923273 7923563 -132393202 - AluSx SINE Alu -21 291 1 1565 163 48 38 chr10 7923568 7923857 -132392908 - AluJo SINE Alu -10 292 1 488 121 0 0 chr10 7924569 7924635 -132392130 - AluS SINE Alu -246 67 2 275 149 37 0 chr10 7925153 7925260 -132391505 + (TATAA)n Simple_repeat Simple_repeat 4 114 0 479 88 67 47 chr10 7925281 7925954 -132390811 + (TATAA)n Simple_repeat Simple_repeat 1 686 0 30 45 0 0 chr10 7925964 7926008 -132390757 + AT_rich Low_complexity Low_complexity 1 44 0 258 227 57 11 chr10 7926018 7926106 -132390659 + L1MC4 LINE L1 6615 6706 -1336 268 330 27 9 chr10 7926170 7926282 -132390483 + Charlie2 DNA MER1_type 18 131 -2651 2169 216 64 82 chr10 7926396 7927092 -132389673 + Charlie2 DNA MER1_type 1869 2576 -286 1626 203 7 3 chr10 7927092 7927382 -132389383 - AluJb SINE Alu -21 291 1 2169 216 64 82 chr10 7927382 7927493 -132389272 + Charlie2 DNA MER1_type 2576 2661 -201 2334 106 3 3 chr10 7927493 7927805 -132388960 + AluSx SINE Alu 1 312 0 2169 216 64 82 chr10 7927805 7927871 -132388894 + Charlie2 DNA MER1_type 2661 2727 -135 726 155 31 54 chr10 7927971 7928100 -132388665 - AluJo SINE Alu -100 212 87 352 267 10 20 chr10 7928102 7928203 -132388562 + Charlie2 DNA MER1_type 2761 2860 -2 2062 126 3 0 chr10 7928766 7929052 -132387713 - AluJb SINE Alu -25 287 1 2065 148 32 42 chr10 7929063 7929441 -132387324 - L1MC1 LINE L1 0 6333 5960 200 284 34 45 chr10 7929663 7929751 -132387014 - MER5B DNA MER1_type -67 111 25 615 122 0 0 chr10 7930071 7930153 -132386612 + AluY SINE Alu 2 83 -227 899 247 131 0 chr10 7930172 7930439 -132386326 + L1ME3 LINE L1 5830 6131 -31 2346 84 3 3 chr10 7930439 7930747 -132386018 + AluY SINE Alu 1 308 -3 1948 123 3 0 chr10 7931714 7931998 -132384767 - AluSg SINE Alu -4 306 22 1815 112 8 0 chr10 7932248 7932498 -132384267 + AluSx SINE Alu 1 252 -60 293 141 0 4 chr10 7932546 7932599 -132384166 + Alu SINE Alu 251 291 -11 754 186 16 0 chr10 7932801 7932925 -132383840 - FLAM_C SINE Alu -16 127 2 772 316 35 23 chr10 7933581 7933923 -132382842 + L1MC4a LINE L1 5567 5912 -1896 228 244 0 0 chr10 7933956 7934001 -132382764 - L1MC4 LINE L1 -1340 6702 6658 1375 99 6 0 chr10 7934136 7934317 -132382448 - AluSg/x SINE Alu -14 296 115 233 224 0 35 chr10 7934887 7934945 -132381820 + CT-rich Low_complexity Low_complexity 2 57 0 2453 90 3 0 chr10 7935387 7935698 -132381067 + AluSp SINE Alu 1 312 -1 989 244 9 18 chr10 7935772 7935993 -132380772 - MER20 DNA MER1_type 0 219 1 550 243 97 138 chr10 7936034 7936549 -132380216 - L2 LINE L2 0 3313 2820 * 3132 288 109 6 chr10 7936539 7937825 -132378940 - L2 LINE L2 -706 2608 1191 1819 148 0 48 chr10 7939479 7939789 -132376976 - AluJb SINE Alu -12 300 6 2009 127 27 7 chr10 7940131 7940431 -132376334 + AluJb SINE Alu 2 307 -5 1659 169 3 40 chr10 7941635 7941936 -132374829 + AluJo SINE Alu 2 291 -21 1935 92 4 15 chr10 7941953 7942214 -132374551 + AluSq SINE Alu 1 258 -55 375 113 0 0 chr10 7942229 7942291 -132374474 + (TA)n Simple_repeat Simple_repeat 2 63 0 2298 114 0 13 chr10 7942559 7942875 -132373890 - AluSx SINE Alu 0 312 1 2004 136 17 0 chr10 7943670 7943964 -132372801 - AluJo SINE Alu -13 299 1 844 183 69 137 chr10 7944265 7944571 -132372194 - MLT2D LTR ERVL 0 414 130 1225 106 0 0 chr10 7944571 7944732 -132372033 - AluSg/x SINE Alu -15 295 135 779 178 0 34 chr10 7945461 7945607 -132371158 + FLAM_C SINE Alu 2 142 -1 1893 5 0 0 chr10 7945897 7946101 -132370664 + AluYb8 SINE Alu 115 318 0 4695 160 28 20 chr10 7946151 7947059 -132369706 + L1MC1 LINE L1 5188 6103 -230 195 288 50 12 chr10 7947551 7947631 -132369134 - MIR SINE MIR -12 250 168 1992 146 0 16 chr10 7948077 7948385 -132368380 + AluJo SINE Alu 1 303 -9 2321 93 3 3 chr10 7948387 7948689 -132368076 + AluSc SINE Alu 6 307 -2 923 138 0 0 chr10 7948976 7949106 -132367659 + FLAM_C SINE Alu 1 130 -3 2934 144 35 38 chr10 7949111 7949185 -132367580 + L1MB7 LINE L1 5514 5587 -597 2934 166 16 14 chr10 7949185 7949700 -132367065 + L1MB7 LINE L1 5655 6172 -12 2934 144 35 38 chr10 7949700 7949723 -132367042 + L1MB7 LINE L1 5587 6172 -12 22 0 0 0 chr10 7950176 7950198 -132366567 + AT_rich Low_complexity Low_complexity 1 22 0 473 285 149 17 chr10 7950400 7950767 -132365998 + MLT1J2 LTR MaLR 1 476 -35 509 286 119 62 chr10 7950971 7951198 -132365567 + MIR SINE MIR 8 247 -15 2196 100 7 0 chr10 7951247 7951581 -132365184 + AluSx SINE Alu 1 336 0 255 125 0 0 chr10 7951615 7951655 -132365110 + (ATG)n Simple_repeat Simple_repeat 3 42 0 2126 98 21 0 chr10 7952108 7952394 -132364371 - AluSx SINE Alu -15 297 6 393 278 70 27 chr10 7953561 7953748 -132363017 + L1ME4a LINE L1 5927 6121 0 1781 215 63 59 chr10 7954366 7954570 -132362195 + L1ME1 LINE L1 5569 5771 -395 2060 112 80 0 chr10 7954570 7954884 -132361881 + MER44D DNA MER2_type 1 609 0 1781 215 63 59 chr10 7954884 7955270 -132361495 + L1ME1 LINE L1 5771 6161 -5 1819 116 113 72 chr10 7955548 7955760 -132361005 + MER46B DNA MER2_type 1 109 -2622 2033 151 3 0 chr10 7955760 7956059 -132360706 + AluSx SINE Alu 11 310 -2 1819 116 113 72 chr10 7956059 7956192 -132360573 + MER46B DNA MER2_type 109 235 -1 2231 127 0 0 chr10 7957004 7957312 -132359453 + AluSx SINE Alu 1 308 -4 320 130 0 0 chr10 7957386 7957432 -132359333 + MADE1 DNA Mariner 1 46 -34 22 35 0 0 chr10 7958042 7958071 -132358694 + AT_rich Low_complexity Low_complexity 1 29 0 2370 93 3 3 chr10 7958907 7959209 -132357556 + AluSp SINE Alu 1 302 -11 1135 183 14 10 chr10 7959212 7959420 -132357345 + AluJo SINE Alu 6 214 -98 285 116 0 55 chr10 7959422 7959482 -132357283 + FLAM SINE Alu 82 132 -1 35 92 0 0 chr10 7959539 7959637 -132357128 + AT_rich Low_complexity Low_complexity 1 98 0 2194 114 0 3 chr10 7960770 7961067 -132355698 + AluSg SINE Alu 1 296 -14 217 326 128 47 chr10 7961144 7961316 -132355449 + L2 LINE L2 2748 2933 -381 223 354 40 10 chr10 7961413 7961512 -132355253 + L2 LINE L2 3148 3249 -23 2144 107 0 29 chr10 7961603 7961913 -132354852 + AluSx SINE Alu 1 301 -11 1996 147 6 16 chr10 7962266 7962580 -132354185 + AluSx SINE Alu 1 311 -1 2252 117 3 0 chr10 7962768 7963075 -132353690 + AluSx SINE Alu 5 312 0 230 328 123 23 chr10 7963668 7963839 -132352926 + MIR SINE MIR 4 191 -71 2373 79 0 0 chr10 7963969 7964259 -132352506 - AluSx SINE Alu -22 290 1 516 318 100 35 chr10 7964804 7965115 -132351650 - L3 LINE CR1 -521 1056 726 2275 121 0 6 chr10 7965639 7965954 -132350811 + AluSq SINE Alu 1 313 0 1627 209 58 62 chr10 7966858 7967361 -132349404 + MLT1D LTR MaLR 5 505 0 1190 181 23 9 chr10 7968002 7968223 -132348542 + MER58A DNA MER1_type 1 224 0 914 121 0 50 chr10 7968568 7968708 -132348057 + FLAM_A SINE Alu 1 133 0 642 238 88 59 chr10 7969130 7969403 -132347362 + MLT1L LTR MaLR 2 282 -333 351 242 91 10 chr10 7969515 7969614 -132347151 + MLT1L LTR MaLR 500 606 -9 22 35 0 0 chr10 7969746 7969775 -132346990 + AT_rich Low_complexity Low_complexity 1 29 0 2355 90 0 10 chr10 7969975 7970276 -132346489 + AluSg SINE Alu 1 298 -12 1807 139 4 4 chr10 7970287 7970561 -132346204 + AluSx SINE Alu 1 274 -38 1726 86 0 9 chr10 7970562 7970784 -132345981 + AluSg/x SINE Alu 87 306 -6 1669 161 16 30 chr10 7970795 7971100 -132345665 + AluJo SINE Alu 1 301 -11 697 198 10 134 chr10 7971293 7971569 -132345196 + L1ME3 LINE L1 5930 6170 0 2216 92 0 23 chr10 7971643 7971946 -132344819 + AluSx SINE Alu 1 296 -16 384 227 42 8 chr10 7971946 7972056 -132344709 + L2 LINE L2 3194 3310 -3 212 339 102 8 chr10 7972294 7972421 -132344344 - MIR SINE MIR -116 146 8 2180 119 0 0 chr10 7972486 7972796 -132343969 + AluSg SINE Alu 1 310 0 2131 110 7 0 chr10 7973153 7973455 -132343310 + AluSx SINE Alu 1 304 0 1829 136 39 29 chr10 7973545 7973853 -132342912 - MER2 DNA MER2_type -34 311 1 2040 142 0 19 chr10 7974418 7974728 -132342037 - AluSq SINE Alu -9 304 1 1558 167 92 4 chr10 7975497 7975615 -132341150 + AluJb SINE Alu 1 107 -205 225 0 0 0 chr10 7975615 7975640 -132341125 + (CA)n Simple_repeat Simple_repeat 2 26 0 1558 167 92 4 chr10 7975640 7975802 -132340963 + AluJb SINE Alu 107 306 -6 2002 131 3 7 chr10 7975803 7976109 -132340656 + AluSq SINE Alu 2 306 -7 526 170 107 0 chr10 7976124 7976236 -132340529 + Charlie1 DNA MER1_type 2622 2745 -16 196 293 48 75 chr10 7976384 7976531 -132340234 - L3 LINE CR1 -957 620 478 804 160 0 0 chr10 7976959 7977078 -132339687 + FLAM_C SINE Alu 12 130 -13 2137 120 0 3 chr10 7977522 7977821 -132338944 + AluSx SINE Alu 1 298 -14 789 136 36 0 chr10 7977823 7977933 -132338832 - AluJo/FLAM SINE Alu -192 120 7 485 228 205 29 chr10 7977955 7978126 -132338639 - MIR SINE MIR -2 260 60 377 284 0 0 chr10 7978403 7978505 -132338260 + MIR3 SINE MIR 91 192 -16 1911 141 7 34 chr10 7978978 7979276 -132337489 + AluJb SINE Alu 1 290 -22 2431 74 7 7 chr10 7979284 7979594 -132337171 + AluY SINE Alu 1 310 -1 198 0 0 0 chr10 7980295 7980317 -132336448 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1859 155 13 23 chr10 7980333 7980636 -132336129 + AluSx SINE Alu 1 300 -12 2304 109 3 0 chr10 7980813 7981124 -132335641 - AluSx SINE Alu 0 312 1 1272 193 41 4 chr10 7981584 7981828 -132334937 + AluJb SINE Alu 1 253 -59 29 0 0 0 chr10 7982213 7982242 -132334523 + AT_rich Low_complexity Low_complexity 1 29 0 416 199 69 30 chr10 7982888 7983019 -132333746 + MIR SINE MIR 126 261 -1 2351 81 7 0 chr10 7983898 7984193 -132332572 + L1PA7 LINE L1 5858 6154 0 1397 163 68 44 chr10 7984541 7984835 -132331930 + AluJo SINE Alu 7 307 -5 463 290 20 132 chr10 7985598 7985946 -132330819 - L2 LINE L2 -35 3237 2929 21 0 0 0 chr10 7986041 7986062 -132330703 + AT_rich Low_complexity Low_complexity 1 21 0 2191 124 3 0 chr10 7986669 7986975 -132329790 - AluSq SINE Alu -5 308 2 203 235 20 0 chr10 7988348 7988399 -132328366 - L3 LINE CR1 -1 1576 1525 352 271 192 6 chr10 7988706 7988883 -132327882 - L3 LINE CR1 -48 1529 1320 457 246 39 68 chr10 7988918 7988970 -132327795 + L1MC5 LINE L1 7717 7769 -192 2518 51 3 0 chr10 7988970 7989263 -132327502 - AluY SINE Alu -17 294 1 457 246 39 68 chr10 7989263 7989417 -132327348 + L1MC5 LINE L1 7769 7917 -44 289 376 102 0 chr10 7989442 7989639 -132327126 - L3 LINE CR1 -310 1267 1051 3006 82 0 0 chr10 7990033 7990410 -132326355 - L1PA8 LINE L1 0 6172 5796 441 277 97 9 chr10 7990800 7990989 -132325776 - MER20B DNA MER1_type -8 211 6 1339 220 125 9 chr10 7991226 7991553 -132325212 - MLT1A1 LTR MaLR 0 365 1 2114 134 0 0 chr10 7991950 7992249 -132324516 + AluY SINE Alu 1 299 -12 1266 199 83 11 chr10 7992834 7993100 -132323665 - AluJo SINE Alu -27 285 1 2634 42 0 3 chr10 7993277 7993583 -132323182 - AluY SINE Alu -6 305 1 186 276 153 20 chr10 7993689 7993787 -132322978 - L2 LINE L2 0 3313 3203 305 220 34 0 chr10 7993960 7994019 -132322746 - MER2 DNA MER2_type 0 345 285 * 412 231 115 15 chr10 7994011 7994141 -132322624 - MER2 DNA MER2_type -96 143 1 2255 106 0 0 chr10 7994252 7994544 -132322221 + AluSc SINE Alu 1 292 -17 241 221 176 0 chr10 7994598 7994666 -132322099 - L2 LINE L2 -1 3312 3233 1224 210 52 21 chr10 7994849 7995139 -132321626 - AluSx SINE Alu -13 299 1 1575 133 18 0 chr10 7995165 7995390 -132321375 - AluSq SINE Alu -82 231 3 1667 172 3 10 chr10 7995566 7995862 -132320903 + AluSx SINE Alu 1 294 -18 2309 89 7 20 chr10 7996064 7996367 -132320398 - AluSq SINE Alu -14 299 1 1033 210 109 58 chr10 7997111 7997558 -132319207 - MLT1D LTR MaLR -5 462 1 1901 122 22 0 chr10 7997642 7997912 -132318853 - L1PA15 LINE L1 -3 6162 5887 466 250 21 0 chr10 7998370 7998466 -132318299 - MER91A DNA MER1_type -2 194 97 1373 152 0 17 chr10 7998675 7998906 -132317859 + AluJo SINE Alu 86 312 0 492 141 0 0 chr10 7998922 7999003 -132317762 + L1PB4 LINE L1 5874 5954 -200 796 235 7 0 chr10 7999115 7999264 -132317501 + L1PB4 LINE L1 6000 6149 -7 188 300 14 14 chr10 8001419 8001489 -132315276 + L2 LINE L2 2747 2816 -498 920 149 0 0 chr10 8001925 8002228 -132314537 + (GAGTG)n Simple_repeat Simple_repeat 1 303 0 233 224 0 35 chr10 8002760 8002818 -132313947 + CT-rich Low_complexity Low_complexity 2 57 0 2439 90 3 3 chr10 8003260 8003572 -132313193 + AluSp SINE Alu 1 312 -1 918 244 9 18 chr10 8003646 8003867 -132312898 - MER20 DNA MER1_type 0 219 1 408 245 99 140 chr10 8003908 8004423 -132312342 - L2 LINE L2 0 3313 2820 2761 289 104 5 chr10 8004462 8005699 -132311066 - L2 LINE L2 -764 2550 1191 1835 148 0 48 chr10 8007353 8007663 -132309102 - AluJb SINE Alu -12 300 6 2159 106 3 3 chr10 8008005 8008289 -132308476 + AluSq SINE Alu 2 285 -28 524 141 113 42 chr10 8008304 8008446 -132308319 + Charlie1 DNA MER1_type 2604 2755 -6 423 241 25 137 chr10 8008527 8008629 -132308136 - MIR SINE MIR -38 224 163 2006 115 14 14 chr10 8008629 8008924 -132307841 - AluSg SINE Alu -15 295 1 423 241 25 137 chr10 8008924 8009062 -132307703 - MIR SINE MIR -99 163 11 312 134 152 27 chr10 8010278 8010390 -132306375 + MER113 DNA MER1_type? 123 248 -273 1820 160 7 17 chr10 8010530 8010830 -132305935 + AluJo SINE Alu 1 297 -15 512 237 100 73 chr10 8010839 8011197 -132305568 + L1MC4 LINE L1 7083 7458 -584 1864 163 3 10 chr10 8011197 8011498 -132305267 + AluJb SINE Alu 1 299 -13 512 237 100 73 chr10 8011498 8011537 -132305228 + L1MC4 LINE L1 7458 7494 -548 1998 124 3 65 chr10 8011740 8012063 -132304702 + AluSx SINE Alu 1 303 -9 1410 154 0 0 chr10 8012148 8012368 -132304397 + L1MC1 LINE L1 6013 6232 -101 238 257 34 40 chr10 8012476 8012624 -132304141 + L1MC5 LINE L1 7631 7777 -184 1454 197 47 63 chr10 8012673 8013053 -132303712 + MLT1A2 LTR MaLR 1 374 0 549 252 28 69 chr10 8013351 8013569 -132303196 - MIR SINE MIR -53 209 1 217 239 0 0 chr10 8013569 8013613 -132303152 + L2 LINE L2 3266 3309 -4 516 254 73 6 chr10 8016938 8017115 -132299650 + MIR SINE MIR 33 221 -41 2396 91 0 0 chr10 8017249 8017545 -132299220 + AluSc SINE Alu 1 296 -13 553 195 0 49 chr10 8018512 8018635 -132298130 + AluJb SINE Alu 181 297 -15 3557 240 168 30 chr10 8018635 8019342 -132297423 - L1MC2 LINE L1 -216 6128 5520 2311 87 3 7 chr10 8019342 8019641 -132297124 - AluSg SINE Alu -12 298 1 3557 240 168 30 chr10 8019641 8021036 -132295729 - L1MC2 LINE L1 -824 5520 3701 27 29 0 0 chr10 8021361 8021395 -132295370 + AT_rich Low_complexity Low_complexity 1 34 0 2583 57 0 0 chr10 8022811 8023112 -132293653 - AluY SINE Alu -10 301 1 532 227 37 114 chr10 8023465 8023738 -132293027 - MIR SINE MIR -2 260 9 2281 103 0 22 chr10 8024450 8024633 -132292132 - AluSx SINE Alu 0 312 137 2120 86 41 7 chr10 8024633 8024924 -132291841 - AluY SINE Alu -10 301 1 2281 103 0 22 chr10 8024924 8025059 -132291706 - AluSx SINE Alu -175 137 1 2190 80 7 0 chr10 8026435 8026710 -132290055 - AluY SINE Alu -21 290 14 2378 101 0 0 chr10 8026715 8027022 -132289743 - AluSx SINE Alu -5 307 1 337 242 124 25 chr10 8027413 8027574 -132289191 + MER104 DNA Tc2 4 180 0 1742 134 180 0 chr10 8027790 8028096 -132288669 - MER46B DNA MER2_type 0 236 1 789 157 109 58 chr10 8029522 8029795 -132286970 + MER2 DNA MER2_type 2 320 -25 340 214 111 56 chr10 8030175 8030301 -132286464 - L2 LINE L2 -9 3304 3172 453 225 217 0 chr10 8030334 8030463 -132286302 + MER58C DNA MER1_type 59 215 0 319 323 90 62 chr10 8030542 8030997 -132285768 + L2 LINE L2 2804 3271 -1 264 194 56 14 chr10 8031353 8031425 -132285340 + MIR SINE MIR 77 151 -111 2549 69 0 0 chr10 8031689 8031994 -132284771 + AluY SINE Alu 1 305 -6 1737 145 4 0 chr10 8032025 8032273 -132284492 + AluJo SINE Alu 1 249 -63 2393 68 10 7 chr10 8032593 8032889 -132283876 + AluSx SINE Alu 1 297 -15 899 159 173 30 chr10 8033495 8033748 -132283017 - Charlie1b DNA MER1_type -244 279 1 1847 123 55 44 chr10 8034277 8034570 -132282195 + AluSx SINE Alu 1 296 -16 22 94 0 0 chr10 8034794 8034858 -132281907 + AT_rich Low_complexity Low_complexity 1 64 0 195 42 0 0 chr10 8035157 8035181 -132281584 + (TG)n Simple_repeat Simple_repeat 1 24 0 814 125 33 0 chr10 8035214 8035334 -132281431 - FLAM_C SINE Alu -5 128 5 439 225 231 0 chr10 8035490 8035663 -132281102 + MIR SINE MIR 45 257 -5 249 251 124 115 chr10 8035706 8036029 -132280736 - L2 LINE L2 -20 3252 2927 1820 146 43 0 chr10 8036261 8036542 -132280223 - AluSx SINE Alu -19 293 1 486 200 20 0 chr10 8037108 8037208 -132279557 - L1MB7 LINE L1 -1 6183 6082 194 275 20 114 chr10 8037356 8037505 -132279260 - L2 LINE L2 -954 2360 2226 1499 170 4 0 chr10 8037578 8037813 -132278952 + AluJb SINE Alu 2 237 -75 1175 142 0 0 chr10 8037814 8037983 -132278782 + AluSg/x SINE Alu 141 309 -3 1572 267 37 12 chr10 8038009 8038160 -132278605 + L1MC4a LINE L1 6453 6599 -1209 2285 76 10 3 chr10 8038160 8038451 -132278314 + AluSx SINE Alu 2 294 -18 1572 267 37 12 chr10 8038451 8038782 -132277983 + L1MC4a LINE L1 6599 6947 -861 1966 107 55 4 chr10 8038804 8039098 -132277667 + AluSq SINE Alu 2 309 0 277 280 19 0 chr10 8039105 8039212 -132277553 + L1MC4 LINE L1 7689 7797 -245 1088 207 118 7 chr10 8039227 8039531 -132277234 + LTR16A LTR ERVL 16 353 -97 305 271 0 12 chr10 8039534 8039619 -132277146 + C-rich Low_complexity Low_complexity 4 87 0 304 227 94 70 chr10 8039628 8039756 -132277009 + LTR16A LTR ERVL 320 450 0 658 202 82 91 chr10 8039757 8040000 -132276765 + HERV16 LTR ERVL 2 242 -4754 1157 292 85 16 chr10 8040129 8041102 -132275663 + HERV16 LTR ERVL 1584 2670 -2326 1204 185 39 5 chr10 8041102 8041307 -132275458 + Tigger5 DNA MER2_type 1 212 -2111 271 146 0 0 chr10 8041320 8041361 -132275404 + MERVL LTR ERVL 4353 4393 -1092 798 358 26 18 chr10 8041408 8041624 -132275141 + MERVL LTR ERVL 4525 4738 -1026 1300 195 30 47 chr10 8041624 8041922 -132274843 - AluJo SINE Alu -15 297 5 798 358 26 18 chr10 8041922 8042161 -132274604 + MERVL LTR ERVL 4738 4984 -780 750 261 122 30 chr10 8042663 8042992 -132273773 + LTR16A LTR ERVL 92 450 0 737 239 32 24 chr10 8043004 8043251 -132273514 + L1MC4 LINE L1 7793 8041 -1 203 300 0 12 chr10 8043362 8043442 -132273323 - L2 LINE L2 -1326 1988 1910 234 0 0 0 chr10 8044044 8044070 -132272695 + (A)n Simple_repeat Simple_repeat 1 26 0 389 186 21 21 chr10 8044116 8044213 -132272552 + MER96B DNA MER1_type? 278 374 -43 204 195 0 0 chr10 8046548 8046589 -132270176 + L2 LINE L2 3273 3313 0 1971 151 0 0 chr10 8046694 8046986 -132269779 - AluJo SINE Alu -20 292 1 225 0 0 0 chr10 8047131 8047156 -132269609 + (CTAGG)n Simple_repeat Simple_repeat 2 26 0 257 315 56 0 chr10 8047560 8047649 -132269116 - L2 LINE L2 -9 3263 3170 934 190 0 6 chr10 8049158 8049321 -132267444 + AluJb SINE Alu 137 298 -14 382 236 22 0 chr10 8049389 8049478 -132267287 - L2 LINE L2 -4 3309 3219 1639 182 3 18 chr10 8049541 8049827 -132266938 + AluJo SINE Alu 1 282 -30 2342 91 7 0 chr10 8049827 8050124 -132266641 - AluSg SINE Alu -11 299 1 21 0 0 0 chr10 8050162 8050183 -132266582 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr10 8050433 8050462 -132266303 + AT_rich Low_complexity Low_complexity 1 29 0 3534 155 37 28 chr10 8051529 8052179 -132264586 - L1MB3 LINE L1 -14 6169 5514 206 32 32 0 chr10 8052629 8052660 -132264105 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 306 275 70 76 chr10 8053393 8053564 -132263201 + MIR SINE MIR 63 232 -30 1476 137 111 19 chr10 8053579 8053690 -132263075 + AluJo SINE Alu 1 100 -212 2512 68 3 0 chr10 8053690 8053999 -132262766 + AluY SINE Alu 1 310 -1 1476 137 111 19 chr10 8053999 8054158 -132262607 + AluJo SINE Alu 100 296 -16 1029 152 0 0 chr10 8054292 8054443 -132262322 + FAM SINE Alu 16 166 -19 2482 78 13 0 chr10 8054942 8055248 -132261517 + AluSx SINE Alu 1 310 -2 3939 176 14 12 chr10 8055357 8056117 -132260648 - L1MC3 LINE L1 -3 7782 7021 254 159 26 142 chr10 8056444 8056557 -132260208 - L1ME3A LINE L1 -106 6064 5965 929 159 28 0 chr10 8056665 8056847 -132259918 - AluSg/x SINE Alu -3 307 121 24 67 0 0 chr10 8057979 8058024 -132258741 + AT_rich Low_complexity Low_complexity 1 45 0 1644 128 84 0 chr10 8058201 8058452 -132258313 - AluSx SINE Alu -18 294 23 263 342 129 13 chr10 8058971 8059126 -132257639 + MIR SINE MIR 20 192 -70 1411 264 76 9 chr10 8060014 8060464 -132256301 - MLT1E2 LTR MaLR 0 626 147 967 258 42 31 chr10 8060608 8060965 -132255800 - HAL1 LINE L1 -904 1603 1243 1586 151 50 7 chr10 8060970 8061249 -132255516 - AluJo SINE Alu 0 312 22 257 123 38 54 chr10 8061349 8061405 -132255360 - AluJo SINE Alu -258 42 1 319 279 62 0 chr10 8061405 8061534 -132255231 - HAL1 LINE L1 -1265 1242 1106 444 314 85 44 chr10 8061534 8061694 -132255071 - MLT1L LTR MaLR 0 615 463 2464 82 3 0 chr10 8061694 8062000 -132254765 + AluSx SINE Alu 1 307 -5 444 314 85 44 chr10 8062000 8062158 -132254607 - MLT1L LTR MaLR -152 463 284 376 317 113 52 chr10 8062165 8062679 -132254086 - HAL1 LINE L1 -1505 1002 458 227 244 197 16 chr10 8063232 8063359 -132253406 + L1ME4a LINE L1 5892 6041 -80 23 0 0 0 chr10 8064096 8064119 -132252646 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr10 8064351 8064380 -132252385 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr10 8065047 8065069 -132251696 + AT_rich Low_complexity Low_complexity 1 22 0 376 212 46 129 chr10 8065245 8065486 -132251279 - L1MC4 LINE L1 -87 7955 7735 2163 100 4 0 chr10 8065499 8065778 -132250987 + AluSp SINE Alu 27 306 -7 758 290 122 12 chr10 8065832 8066260 -132250505 - L1MC4 LINE L1 -537 7505 7031 1422 194 15 7 chr10 8066286 8066559 -132250206 + AluJo SINE Alu 15 289 -23 1027 201 24 36 chr10 8066560 8066809 -132249956 - L1MC4 LINE L1 -1013 7029 6784 299 329 66 51 chr10 8067722 8067859 -132248906 + L2 LINE L2 3134 3272 0 1051 260 100 57 chr10 8068009 8068520 -132248245 + Charlie8 DNA MER1_type 12 544 -1873 2295 92 0 10 chr10 8068930 8069225 -132247540 + AluSg SINE Alu 1 292 -18 518 184 48 0 chr10 8069969 8070072 -132246693 - MER114 LTR ERV -95 553 446 281 130 0 0 chr10 8070230 8070276 -132246489 - FRAM/FAM SINE Alu -120 46 1 23 54 0 0 chr10 8070791 8070828 -132245937 + AT_rich Low_complexity Low_complexity 1 37 0 262 224 52 43 chr10 8070891 8071007 -132245758 - MER113 DNA MER1_type? -404 117 1 181 377 35 13 chr10 8071162 8071390 -132245375 - L2 LINE L2 -556 2758 2526 551 301 31 35 chr10 8071574 8071830 -132244935 - MER102b DNA MER1_type -3 338 84 224 267 93 13 chr10 8071836 8071911 -132244854 + MIR SINE MIR 159 239 -23 695 161 65 30 chr10 8072221 8072389 -132244376 - MER5A DNA MER1_type 0 189 16 631 258 60 0 chr10 8072531 8072698 -132244067 + MER5A DNA MER1_type 13 189 0 1254 218 107 3 chr10 8073252 8073550 -132243215 + MER2 DNA MER2_type 6 334 -11 2315 117 0 0 chr10 8073766 8074075 -132242690 - AluSx SINE Alu -3 309 1 344 290 15 70 chr10 8075002 8075202 -132241563 + Charlie8 DNA MER1_type 1 189 -2228 719 190 0 0 chr10 8075678 8075794 -132240971 - FLAM_C SINE Alu -17 116 1 1166 253 30 22 chr10 8076296 8076659 -132240106 - MLT1B LTR MaLR -7 383 18 984 247 74 54 chr10 8077086 8077667 -132239098 + L1MC5 LINE L1 7261 7774 -187 325 336 160 15 chr10 8077689 8077957 -132238808 + L2 LINE L2 2988 3294 -19 2524 71 0 0 chr10 8078327 8078635 -132238130 - AluSx SINE Alu -4 308 1 1822 226 95 74 chr10 8078635 8079204 -132237561 - L1MC5 LINE L1 -435 7526 6934 2282 93 0 0 chr10 8079204 8079495 -132237270 - AluSg SINE Alu -19 291 1 1822 226 95 74 chr10 8079495 8079725 -132237040 - L1MC5 LINE L1 -1027 6934 6710 36 0 0 0 chr10 8079731 8079767 -132236998 + AT_rich Low_complexity Low_complexity 1 36 0 2279 179 13 30 chr10 8079777 8080251 -132236514 - L1MA7 LINE L1 -26 6265 5800 998 134 5 80 chr10 8080255 8080387 -132236378 - L1MA3 LINE L1 0 6305 6191 2017 137 6 19 chr10 8080387 8080701 -132236064 - AluSx SINE Alu -2 310 1 998 134 5 80 chr10 8080701 8080769 -132235996 - L1MA3 LINE L1 -114 6191 6120 504 188 0 0 chr10 8080769 8080849 -132235916 + AluJ/FLAM SINE Alu 5 84 -228 393 162 0 0 chr10 8080849 8080917 -132235848 - L1MA3 LINE L1 -175 6130 6063 * 2889 143 54 6 chr10 8080897 8081412 -132235353 - L1MA7 LINE L1 -475 5816 5293 240 77 0 0 chr10 8081850 8081889 -132234876 - L1MA7 LINE L1 -991 5300 5262 * 1833 191 32 8 chr10 8081885 8082287 -132234478 - L1 LINE L1 -816 5330 4919 278 198 0 62 chr10 8082292 8082373 -132234392 - L1MC5 LINE L1 -1237 6724 6649 1634 108 18 0 chr10 8082969 8083191 -132233574 + MER30 DNA MER1_type 5 230 0 209 308 219 31 chr10 8083781 8084129 -132232636 + L2 LINE L2 1932 2213 -1101 2171 95 57 0 chr10 8084129 8084425 -132232340 - AluSp SINE Alu 0 313 1 209 308 219 31 chr10 8084425 8084650 -132232115 + L2 LINE L2 2213 2613 -701 1406 157 25 98 chr10 8084797 8084932 -132231833 + AluJb SINE Alu 1 144 -168 1964 127 0 0 chr10 8084932 8085200 -132231565 + AluSq SINE Alu 1 268 -45 1406 157 25 98 chr10 8085200 8085212 -132231553 + AluJb SINE Alu 144 155 -157 2135 139 0 0 chr10 8085212 8085514 -132231251 + AluSx SINE Alu 1 302 -10 1406 157 25 98 chr10 8085514 8085683 -132231082 + AluJb SINE Alu 155 295 -17 285 341 67 39 chr10 8085858 8086037 -132230728 - MIR SINE MIR -56 206 23 2174 128 0 7 chr10 8086206 8086533 -132230232 - AluSx SINE Alu 0 312 1 203 79 26 0 chr10 8086761 8086799 -132229966 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 214 273 0 80 chr10 8087342 8087430 -132229335 - MIR SINE MIR -157 105 25 2395 71 0 0 chr10 8088009 8088303 -132228462 - AluY SINE Alu -17 294 1 2470 80 0 3 chr10 8088688 8089002 -132227763 - AluSq SINE Alu 0 313 1 271 336 31 8 chr10 8089115 8089243 -132227522 - L2 LINE L2 -1 3271 3141 25 0 0 0 chr10 8089720 8089745 -132227020 + AT_rich Low_complexity Low_complexity 1 25 0 1638 190 48 0 chr10 8090016 8090311 -132226454 - AluJb SINE Alu -3 309 1 202 232 126 21 chr10 8090565 8090660 -132226105 + MIR SINE MIR 99 203 -59 1675 162 36 4 chr10 8090982 8091260 -132225505 - AluJo SINE Alu -25 287 1 2413 87 0 3 chr10 8092218 8092527 -132224238 - AluSc SINE Alu -1 308 1 633 265 94 32 chr10 8092658 8093051 -132223714 - L1ME LINE L1 -326 5836 5450 2393 69 7 0 chr10 8093804 8094107 -132222658 - AluY SINE Alu -6 305 1 3390 168 73 80 chr10 8094320 8095286 -132221479 + Looper DNA T2_type 1 960 -598 1772 179 3 3 chr10 8095306 8095597 -132221168 - AluJo SINE Alu -19 293 3 716 172 61 37 chr10 8095597 8095620 -132221145 + Looper DNA T2_type 1392 1413 -145 2021 122 3 16 chr10 8095620 8095923 -132220842 - AluSx SINE Alu -13 299 1 716 172 61 37 chr10 8095923 8096062 -132220703 + Looper DNA T2_type 1413 1558 0 671 251 96 35 chr10 8096925 8097124 -132219641 - MIR SINE MIR -21 241 31 1959 148 0 10 chr10 8097516 8097821 -132218944 - AluJb SINE Alu -10 302 1 2154 126 3 0 chr10 8098233 8098527 -132218238 + AluSx SINE Alu 1 295 -17 213 175 0 0 chr10 8098527 8098567 -132218198 + (TA)n Simple_repeat Simple_repeat 1 40 0 1249 263 51 47 chr10 8098750 8099336 -132217429 - L2 LINE L2 0 3313 2736 654 265 44 22 chr10 8099349 8099621 -132217144 - L1MC5 LINE L1 -31 7930 7653 1522 202 20 17 chr10 8099623 8099925 -132216840 - AluJo SINE Alu -9 303 1 917 153 0 0 chr10 8099944 8100081 -132216684 - FRAM SINE Alu -30 146 10 2162 200 50 79 chr10 8100089 8100889 -132215876 - L1MC5 LINE L1 -305 7656 6880 3152 213 91 61 chr10 8100898 8101927 -132214838 - MER63D DNA MER1_type 0 1061 2 1791 242 112 105 chr10 8102759 8103643 -132213122 + HAL1 LINE L1 1 877 -1630 787 135 0 15 chr10 8103643 8103776 -132212989 + FLAM_C SINE Alu 3 133 0 1791 242 112 105 chr10 8103776 8104044 -132212721 + HAL1 LINE L1 877 1165 -1342 2142 65 41 27 chr10 8104044 8104338 -132212427 + AluSx SINE Alu 1 298 -14 1791 242 112 105 chr10 8104338 8104416 -132212349 + HAL1 LINE L1 1165 1241 -1266 809 201 22 0 chr10 8104470 8104649 -132212116 + L1MC5 LINE L1 6694 6876 -1085 1775 235 37 8 chr10 8104663 8105148 -132211617 + MER63C DNA MER1_type 1 499 -431 222 282 0 39 chr10 8106504 8106582 -132210183 + MIR SINE MIR 180 254 -8 204 235 0 0 chr10 8106646 8106714 -132210051 + (TG)n Simple_repeat Simple_repeat 1 68 0 270 299 39 0 chr10 8106749 8106826 -132209939 + L2 LINE L2 2990 3069 -244 2336 58 4 0 chr10 8106826 8107158 -132209607 + AluY SINE Alu 7 339 0 504 263 72 13 chr10 8107539 8107691 -132209074 + L2 LINE L2 3150 3310 -3 1997 151 0 16 chr10 8107828 8108145 -132208620 + AluJb SINE Alu 1 312 0 676 235 31 131 chr10 8108367 8108628 -132208137 - L1MC5 LINE L1 -852 7109 6902 2246 109 0 40 chr10 8108628 8108805 -132207960 - AluSg1 SINE Alu -1 308 148 2197 88 3 10 chr10 8108805 8109102 -132207663 - AluY SINE Alu -16 295 1 2246 109 0 40 chr10 8109102 8109245 -132207520 - AluSg1 SINE Alu -161 148 1 676 235 31 131 chr10 8109245 8109396 -132207369 - L1MC5 LINE L1 -1059 6902 6738 1082 258 79 21 chr10 8109408 8110297 -132206468 - L1ME LINE L1 -4649 1431 464 1602 200 70 55 chr10 8110357 8110882 -132205883 - L1ME1 LINE L1 -8 6158 5626 608 200 39 15 chr10 8110883 8111013 -132205752 + LTR40b LTR ERVL 330 462 0 554 242 25 12 chr10 8111013 8111168 -132205597 - L1ME1 LINE L1 -1473 4673 4516 2019 137 7 3 chr10 8111168 8111467 -132205298 + AluSx SINE Alu 1 300 -12 361 219 0 62 chr10 8111472 8111568 -132205197 - L1MC4 LINE L1 -1339 6703 6614 213 121 0 0 chr10 8111568 8111601 -132205164 + (TA)n Simple_repeat Simple_repeat 1 33 0 333 235 59 0 chr10 8111604 8111740 -132205025 - L1ME1 LINE L1 -1625 4521 4378 1892 183 28 5 chr10 8111760 8112148 -132204617 - L1MC1 LINE L1 -6 6327 5931 775 218 55 27 chr10 8112149 8112406 -132204359 - L1MA8 LINE L1 -8 6283 6020 400 217 0 0 chr10 8112404 8112487 -132204278 - L1MC1 LINE L1 -483 5695 5613 * 993 225 17 20 chr10 8112484 8112782 -132203983 - L1MC1 LINE L1 -834 5312 5016 2215 58 0 41 chr10 8113025 8113355 -132203410 + AluY SINE Alu 1 318 0 703 315 142 10 chr10 8114048 8114529 -132202236 - L2 LINE L2 -30 3283 2733 2059 128 6 10 chr10 8114816 8115129 -132201636 + AluSx SINE Alu 1 312 0 2604 135 31 2 chr10 8115592 8116013 -132200752 - Tigger2a DNA MER2_type -1 433 1 613 319 16 20 chr10 8116360 8116608 -132200157 + MIR SINE MIR 2 248 -14 468 296 63 6 chr10 8116660 8116819 -132199946 - MIR SINE MIR -92 170 3 23 0 0 0 chr10 8116946 8116969 -132199796 + AT_rich Low_complexity Low_complexity 1 23 0 219 36 0 0 chr10 8117086 8117114 -132199651 + (TG)n Simple_repeat Simple_repeat 2 29 0 420 306 132 3 chr10 8117298 8117609 -132199156 - L1ME LINE L1 -452 5669 5319 2446 97 0 0 chr10 8119125 8119433 -132197332 - AluSp SINE Alu -5 308 1 210 71 0 0 chr10 8119903 8119931 -132196834 + (T)n Simple_repeat Simple_repeat 1 28 0 28 48 0 0 chr10 8120769 8120811 -132195954 + AT_rich Low_complexity Low_complexity 1 42 0 28 0 0 0 chr10 8122334 8122362 -132194403 + AT_rich Low_complexity Low_complexity 1 28 0 34 89 0 0 chr10 8123647 8123737 -132193028 + AT_rich Low_complexity Low_complexity 1 90 0 440 319 77 6 chr10 8125336 8125505 -132191260 - MIR3 SINE MIR -7 201 21 472 214 10 0 chr10 8125849 8125952 -132190813 - MER69 DNA AcHobo 0 2526 2423 305 250 147 38 chr10 8126091 8126275 -132190490 + L1ME3A LINE L1 5956 6159 -11 450 0 0 0 chr10 8126383 8126433 -132190332 + (TATG)n Simple_repeat Simple_repeat 2 51 0 1903 160 4 0 chr10 8126434 8126715 -132190050 - AluSx SINE Alu -29 283 2 21 0 0 0 chr10 8126786 8126807 -132189958 + AT_rich Low_complexity Low_complexity 1 21 0 1551 166 6 94 chr10 8127615 8127946 -132188819 + AluJo SINE Alu 1 302 -10 2089 134 0 13 chr10 8128644 8128951 -132187814 + AluJb SINE Alu 3 305 -7 324 48 0 0 chr10 8129161 8129203 -132187562 + (CA)n Simple_repeat Simple_repeat 2 43 0 318 287 47 53 chr10 8129403 8129553 -132187212 + MIR3 SINE MIR 1 149 -59 278 200 0 0 chr10 8130049 8130099 -132186666 - MIR3 SINE MIR -34 174 125 417 255 83 88 chr10 8130242 8130434 -132186331 + L3 LINE CR1 1308 1498 -79 4960 224 73 27 chr10 8130474 8131463 -132185302 - L1MC4 LINE L1 0 8042 7100 2110 128 86 37 chr10 8131463 8131869 -132184896 - MSTC LTR MaLR -2 426 1 4960 224 73 27 chr10 8131869 8132081 -132184684 - L1MC4 LINE L1 -942 7100 6899 2283 92 0 3 chr10 8132081 8132376 -132184389 - AluSq SINE Alu -19 294 1 4960 224 73 27 chr10 8132376 8132748 -132184017 - L1MC4 LINE L1 -1143 6899 6546 882 159 11 21 chr10 8132748 8132937 -132183828 + L1MB4 LINE L1 5980 6166 -14 285 51 0 0 chr10 8132938 8132977 -132183788 + (CA)n Simple_repeat Simple_repeat 2 40 0 4960 224 73 27 chr10 8132977 8133281 -132183484 - L1MC4 LINE L1 -1495 6547 5984 1741 143 23 33 chr10 8133616 8133917 -132182848 - AluJb SINE Alu -14 298 1 393 286 129 18 chr10 8134195 8134366 -132182399 + MIR SINE MIR 47 236 -26 2293 92 10 0 chr10 8134642 8134945 -132181820 + AluY SINE Alu 1 306 -5 206 158 0 26 chr10 8135155 8135193 -132181572 + T-rich Low_complexity Low_complexity 1 37 0 908 280 70 45 chr10 8136016 8136642 -132180123 + Charlie7 DNA MER1_type 44 685 -1927 1003 253 37 0 chr10 8137006 8137247 -132179518 - MIR SINE MIR 0 262 13 371 315 178 35 chr10 8137282 8138020 -132178745 + L2 LINE L2 2246 3078 -194 236 280 101 0 chr10 8141754 8141875 -132174890 + MIR3 SINE MIR 10 148 -65 180 250 120 30 chr10 8143478 8143578 -132173187 + MIR SINE MIR 65 173 -89 582 224 104 37 chr10 8143652 8144116 -132172649 + MLT1H LTR MaLR 12 533 -16 2342 193 55 4 chr10 8144154 8144677 -132172088 + MER82 DNA MER2_type 10 559 -94 220 363 25 55 chr10 8144939 8145140 -132171625 + L2 LINE L2 2868 3062 -251 597 271 33 11 chr10 8145377 8145558 -132171207 + HsTC2b DNA Tc2 45 229 -686 341 168 25 134 chr10 8145593 8145712 -132171053 + HsTC2b DNA Tc2 806 911 -7 1598 167 3 84 chr10 8146953 8147276 -132169489 + AluJo SINE Alu 1 297 -15 555 305 159 11 chr10 8147518 8148015 -132168750 + L2 LINE L2 2713 3288 -25 181 331 94 24 chr10 8148097 8148224 -132168541 - L2 LINE L2 -1145 2169 2034 798 154 0 0 chr10 8148280 8148410 -132168355 + FLAM_C SINE Alu 1 130 -3 1813 184 3 3 chr10 8148596 8148900 -132167865 - AluJb SINE Alu -8 304 1 236 312 239 4 chr10 8148994 8149241 -132167524 - L2 LINE L2 -340 2974 2670 433 315 164 25 chr10 8149352 8149755 -132167010 - L2 LINE L2 0 3313 2855 387 0 0 0 chr10 8151205 8151248 -132165517 + (CA)n Simple_repeat Simple_repeat 2 44 0 216 315 71 54 chr10 8152210 8152394 -132164371 - L2 LINE L2 -586 2728 2542 247 301 16 75 chr10 8152416 8152602 -132164163 + Charlie8 DNA MER1_type 13 187 -2230 1256 116 73 0 chr10 8152797 8152981 -132163784 + AluSg/x SINE Alu 112 305 -7 253 228 0 0 chr10 8153049 8153106 -132163659 + L1ME3A LINE L1 6103 6159 -11 2154 131 0 0 chr10 8153346 8153644 -132163121 + AluSx SINE Alu 1 298 -14 228 67 0 0 chr10 8153645 8153675 -132163090 + (TTTC)n Simple_repeat Simple_repeat 2 31 0 197 292 0 97 chr10 8153765 8153837 -132162928 + L2 LINE L2 3127 3191 -81 2313 91 30 0 chr10 8154235 8154533 -132162232 - AluSx SINE Alu -1 311 5 375 23 0 0 chr10 8154817 8154861 -132161904 + (TA)n Simple_repeat Simple_repeat 1 44 0 1552 166 30 51 chr10 8156109 8156405 -132160360 + AluJo SINE Alu 1 290 -22 687 258 307 7 chr10 8156625 8157034 -132159731 + MLT1F1 LTR MaLR 40 567 0 1098 276 64 66 chr10 8157584 8158103 -132158662 + L1MC4 LINE L1 5941 6460 -1433 2301 82 13 38 chr10 8158103 8158420 -132158345 - AluSc SINE Alu 0 309 1 1098 276 64 66 chr10 8158420 8158455 -132158310 + L1MC4 LINE L1 6460 6494 -1399 893 102 8 8 chr10 8158455 8158573 -132158192 + FLAM_C SINE Alu 1 118 -15 1098 276 64 66 chr10 8158573 8158988 -132157777 + L1MC4 LINE L1 6494 7006 -887 253 272 0 16 chr10 8158988 8159113 -132157652 + GA-rich Low_complexity Low_complexity 2 124 0 276 253 117 101 chr10 8159169 8159626 -132157139 + L1MC4 LINE L1 7000 7448 -594 1978 139 0 0 chr10 8159626 8159899 -132156866 + AluJo SINE Alu 1 273 -39 276 253 117 101 chr10 8159899 8160273 -132156492 + L1MC4 LINE L1 7448 7965 -77 233 323 0 23 chr10 8161389 8161522 -132155243 + (TA)n Simple_repeat Simple_repeat 2 131 0 24 53 0 0 chr10 8161782 8161820 -132154945 + AT_rich Low_complexity Low_complexity 1 38 0 257 138 0 35 chr10 8161892 8161950 -132154815 + (TATG)n Simple_repeat Simple_repeat 3 58 0 577 275 53 6 chr10 8163803 8163974 -132152791 + MLT1K LTR MaLR 84 262 -326 30 0 0 0 chr10 8164275 8164305 -132152460 + AT_rich Low_complexity Low_complexity 1 30 0 1578 174 50 30 chr10 8164334 8164503 -132152262 - AluJo SINE Alu -8 304 125 2016 129 61 3 chr10 8164503 8164797 -132151968 - AluSx SINE Alu -1 311 1 1578 174 50 30 chr10 8164797 8164925 -132151840 - AluJo SINE Alu -187 125 1 409 246 27 27 chr10 8165439 8165549 -132151216 + L1ME LINE L1 5520 5629 -492 310 283 53 33 chr10 8165556 8165708 -132151057 + L1ME LINE L1 5672 5826 -295 1875 165 20 3 chr10 8165768 8166065 -132150700 - AluJb SINE Alu -10 302 1 2252 112 0 0 chr10 8167021 8167324 -132149441 + AluSx SINE Alu 1 303 -9 1002 164 0 0 chr10 8169233 8169413 -132147352 - AluJb SINE Alu 0 315 136 325 161 36 0 chr10 8170085 8170141 -132146624 + MLT1K LTR MaLR 531 588 0 2046 123 0 17 chr10 8170419 8170720 -132146045 + AluSx SINE Alu 15 310 -2 23 86 0 0 chr10 8171049 8171107 -132145658 + AT_rich Low_complexity Low_complexity 1 58 0 715 174 90 7 chr10 8173101 8173256 -132143509 - MER58 DNA MER1_type -173 168 1 2461 83 0 6 chr10 8173727 8174040 -132142725 - AluY SINE Alu 0 311 1 1030 146 6 6 chr10 8174043 8174208 -132142557 - FRAM SINE Alu -12 164 1 1277 133 0 15 chr10 8176385 8176400 -132140365 + AluSg/x SINE Alu 121 135 -177 2068 97 45 3 chr10 8176400 8176688 -132140077 + AluY SINE Alu 1 300 -11 1277 133 0 15 chr10 8176688 8176867 -132139898 + AluSg/x SINE Alu 135 312 0 262 281 0 0 chr10 8177117 8177192 -132139573 - MER20 DNA MER1_type -23 196 118 205 309 15 15 chr10 8177417 8177485 -132139280 + L2 LINE L2 3197 3264 -8 246 316 38 0 chr10 8177648 8177727 -132139038 + L2 LINE L2 3208 3289 -24 2328 90 10 0 chr10 8178009 8178310 -132138455 - AluSx SINE Alu -8 304 1 1389 224 126 43 chr10 8178310 8178864 -132137901 - L1MC5 LINE L1 -435 7526 6927 1914 102 0 0 chr10 8178879 8179123 -132137642 - AluSx SINE Alu -19 293 50 1511 172 0 44 chr10 8179821 8180117 -132136648 + AluJb SINE Alu 23 305 -7 368 298 51 6 chr10 8180398 8180556 -132136209 - L1ME LINE L1 -382 6237 6073 833 279 124 29 chr10 8181900 8182480 -132134285 - L1ME LINE L1 -3400 3244 2610 1594 199 7 0 chr10 8182726 8183033 -132133732 + Charlie1 DNA MER1_type 2057 2365 -396 1131 125 52 102 chr10 8183037 8183080 -132133685 + Charlie1 DNA MER1_type 2472 2516 -245 818 178 0 0 chr10 8183080 8183209 -132133556 + FLAM_A SINE Alu 1 129 -4 1131 125 52 102 chr10 8183209 8183356 -132133409 + Charlie1 DNA MER1_type 2516 2644 -117 1964 147 13 3 chr10 8183356 8183663 -132133102 - AluSx SINE Alu -2 310 1 1131 125 52 102 chr10 8183663 8183776 -132132989 + Charlie1 DNA MER1_type 2644 2761 0 811 308 97 19 chr10 8183776 8184405 -132132360 - L1ME LINE L1 -4680 2145 1300 383 293 87 45 chr10 8184467 8184709 -132132056 - L1ME LINE L1 -5264 1370 1119 731 273 32 67 chr10 8185175 8185363 -132131402 + MIR SINE MIR 1 179 -83 2234 108 0 7 chr10 8185363 8185495 -132131270 + AluSp SINE Alu 1 132 -181 405 0 0 0 chr10 8185495 8185540 -132131225 + (CA)n Simple_repeat Simple_repeat 2 46 0 2234 108 0 7 chr10 8185540 8185704 -132131061 + AluSp SINE Alu 132 295 -18 731 273 32 67 chr10 8185704 8185768 -132130997 + MIR SINE MIR 179 244 -18 243 338 27 0 chr10 8185743 8185817 -132130948 + L2 LINE L2 3186 3261 -11 * 263 288 40 45 chr10 8186461 8186659 -132130106 + L1ME3A LINE L1 5756 5952 -218 432 0 0 0 chr10 8186878 8186926 -132129839 + (TA)n Simple_repeat Simple_repeat 1 48 0 426 330 124 5 chr10 8186949 8187167 -132129598 + MIR SINE MIR 18 261 -1 214 290 75 21 chr10 8187170 8187263 -132129502 - MIR SINE MIR -152 110 13 2332 98 0 7 chr10 8187408 8187714 -132129051 - AluSx SINE Alu -8 304 1 364 247 104 26 chr10 8187877 8188031 -132128734 - MLT1I LTR MaLR -14 395 230 225 273 23 31 chr10 8188458 8188586 -132128179 + C-rich Low_complexity Low_complexity 5 131 0 864 166 7 7 chr10 8188769 8188920 -132127845 - FRAM SINE Alu -25 151 1 2334 91 10 3 chr10 8188928 8189235 -132127530 - AluSq SINE Alu -4 309 1 1621 181 21 3 chr10 8189235 8189522 -132127243 - AluJb SINE Alu -19 293 1 2199 104 7 10 chr10 8189940 8190238 -132126527 + AluSq SINE Alu 1 297 -16 1587 158 9 70 chr10 8190561 8190891 -132125874 - AluJo SINE Alu -2 310 1 253 253 21 63 chr10 8191034 8191129 -132125636 + MIR3 SINE MIR 103 193 -15 1841 168 3 13 chr10 8191211 8191520 -132125245 + AluJb SINE Alu 1 306 -6 232 382 0 0 chr10 8191610 8191686 -132125079 + MIR SINE MIR 64 139 -69 23 68 0 0 chr10 8194835 8194879 -132121886 + AT_rich Low_complexity Low_complexity 1 44 0 187 298 107 12 chr10 8194910 8194994 -132121771 - L3 LINE CR1 -902 675 584 21 36 0 0 chr10 8195396 8195424 -132121341 + AT_rich Low_complexity Low_complexity 1 28 0 375 170 0 0 chr10 8198602 8198678 -132118087 - AluJb SINE Alu 0 305 230 895 172 86 6 chr10 8198680 8198854 -132117911 - AluJb SINE Alu -124 188 1 2008 119 3 17 chr10 8198864 8199166 -132117599 - AluSx SINE Alu -14 298 1 2509 55 6 6 chr10 8199310 8199621 -132117144 - AluY SINE Alu 0 311 1 203 278 44 67 chr10 8199624 8199714 -132117051 - L2 LINE L2 0 3272 3185 2402 91 0 0 chr10 8199918 8200215 -132116550 + AluSq SINE Alu 1 297 -16 1641 158 21 32 chr10 8200522 8200829 -132115936 + AluJo SINE Alu 1 304 0 2077 119 17 3 chr10 8200830 8201132 -132115633 + AluSc SINE Alu 1 306 -3 988 98 0 0 chr10 8201153 8201285 -132115480 - AluSq/x SINE Alu -181 132 1 2054 108 4 4 chr10 8202062 8202340 -132114425 - AluSc SINE Alu -31 278 1 696 153 21 162 chr10 8202381 8202567 -132114198 + MER3 DNA MER1_type 1 147 -62 1594 189 3 24 chr10 8202567 8202863 -132113902 - AluJo SINE Alu -22 290 1 696 153 21 162 chr10 8202863 8202917 -132113848 + MER3 DNA MER1_type 147 207 -2 2210 48 0 11 chr10 8203599 8204069 -132112696 + AluY SINE Alu 1 282 -29 1591 6 0 0 chr10 8203890 8204134 -132112631 + (GAAA)n Simple_repeat Simple_repeat 2 423 0 1826 152 14 3 chr10 8204142 8204433 -132112332 + AluJo SINE Alu 5 296 -16 312 27 0 0 chr10 8205498 8205535 -132111230 + (TA)n Simple_repeat Simple_repeat 1 37 0 2132 105 3 7 chr10 8205535 8205831 -132110934 - AluSx SINE Alu -17 295 1 1247 122 0 0 chr10 8206950 8207130 -132109635 - AluSg/x SINE Alu -5 307 128 213 39 0 0 chr10 8207140 8207166 -132109599 + (CA)n Simple_repeat Simple_repeat 2 27 0 2154 86 0 58 chr10 8207243 8207570 -132109195 + AluY SINE Alu 1 308 -3 2331 86 0 0 chr10 8207570 8207871 -132108894 + AluSq SINE Alu 1 301 -12 1974 116 0 24 chr10 8208165 8208280 -132108485 + AluSx SINE Alu 22 138 -174 2211 82 0 0 chr10 8208280 8208599 -132108166 + AluSg SINE Alu 1 319 0 1974 116 0 24 chr10 8208599 8208774 -132107991 + AluSx SINE Alu 138 306 -6 1693 171 10 0 chr10 8209074 8209373 -132107392 + AluJb SINE Alu 1 302 -10 1810 168 3 0 chr10 8210970 8211261 -132105504 - AluJo SINE Alu -20 292 1 234 192 77 0 chr10 8212052 8212071 -132104694 + AluSg/x SINE Alu 113 135 -165 288 105 0 0 chr10 8212071 8212109 -132104656 + Alu SINE Alu 3 40 -262 239 150 25 0 chr10 8212274 8212314 -132104451 + Alu SINE Alu 1 41 -92 1432 150 70 42 chr10 8212440 8212726 -132104039 + AluJo SINE Alu 1 294 -18 2008 102 74 0 chr10 8212833 8213117 -132103648 + AluSp SINE Alu 1 305 -8 320 310 124 8 chr10 8216579 8216708 -132100057 - MIR3 SINE MIR -29 179 36 254 231 15 31 chr10 8217268 8217333 -132099432 + CT-rich Low_complexity Low_complexity 1 64 0 24 0 0 0 chr10 8217455 8217479 -132099286 + GC_rich Low_complexity Low_complexity 1 24 0 218 229 49 33 chr10 8218576 8218637 -132098128 + polypurine Low_complexity Low_complexity 3 64 0 204 40 0 0 chr10 8219859 8219884 -132096881 + (TA)n Simple_repeat Simple_repeat 1 25 0 351 0 0 0 chr10 8219884 8219923 -132096842 + (CA)n Simple_repeat Simple_repeat 2 40 0 387 0 0 0 chr10 8226406 8226449 -132090316 + (TG)n Simple_repeat Simple_repeat 1 43 0 217 143 0 24 chr10 8228687 8228729 -132088036 + (CGGGGG)n Simple_repeat Simple_repeat 2 42 0 249 219 0 0 chr10 8228835 8228908 -132087857 + A-rich Low_complexity Low_complexity 1 73 0 21 36 0 0 chr10 8229735 8229763 -132087002 + GC_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 8230670 8230692 -132086073 + GC_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr10 8231254 8231283 -132085482 + GC_rich Low_complexity Low_complexity 1 29 0 24 77 0 0 chr10 8234187 8234239 -132082526 + GC_rich Low_complexity Low_complexity 1 52 0 291 164 0 0 chr10 8234519 8234580 -132082185 + GA-rich Low_complexity Low_complexity 1 61 0 216 0 0 0 chr10 8240822 8240846 -132075919 + (TC)n Simple_repeat Simple_repeat 2 25 0 23 0 0 0 chr10 8242116 8242139 -132074626 + AT_rich Low_complexity Low_complexity 1 23 0 351 150 0 0 chr10 8244024 8244084 -132072681 + (T)n Simple_repeat Simple_repeat 1 60 0 2230 98 3 0 chr10 8245006 8245311 -132071454 - AluSx SINE Alu -6 306 1 228 67 0 0 chr10 8245455 8245485 -132071280 + (T)n Simple_repeat Simple_repeat 1 30 0 222 220 0 0 chr10 8245717 8245776 -132070989 + A-rich Low_complexity Low_complexity 1 59 0 237 65 0 0 chr10 8246185 8246216 -132070549 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 2414 61 3 3 chr10 8247291 8247602 -132069163 + AluY SINE Alu 1 311 0 2097 109 0 3 chr10 8248232 8248526 -132068239 + AluSx SINE Alu 9 301 -11 277 285 30 79 chr10 8250842 8251007 -132065758 - MIR SINE MIR -46 216 60 2404 78 0 0 chr10 8252618 8252926 -132063839 + AluSg SINE Alu 1 308 -2 180 77 0 0 chr10 8253451 8253477 -132063288 + (A)n Simple_repeat Simple_repeat 1 26 0 282 143 0 0 chr10 8254250 8254299 -132062466 + (A)n Simple_repeat Simple_repeat 1 49 0 25 0 0 0 chr10 8255986 8256011 -132060754 + AT_rich Low_complexity Low_complexity 1 25 0 2255 93 0 0 chr10 8256026 8256328 -132060437 - AluSx SINE Alu -10 302 1 24 0 0 0 chr10 8256774 8256798 -132059967 + AT_rich Low_complexity Low_complexity 1 24 0 2221 109 0 3 chr10 8257010 8257322 -132059443 - AluSx SINE Alu -1 311 1 246 379 76 8 chr10 8258006 8258138 -132058627 + MIR3 SINE MIR 33 173 -35 2098 128 0 3 chr10 8258209 8258514 -132058251 - AluSx SINE Alu -8 304 1 2147 112 3 0 chr10 8258580 8258885 -132057880 + AluSx SINE Alu 1 306 -6 180 0 0 0 chr10 8259175 8259195 -132057570 + (T)n Simple_repeat Simple_repeat 1 20 0 1930 118 0 0 chr10 8259955 8260227 -132056538 + AluSx SINE Alu 11 282 -30 339 44 0 0 chr10 8260230 8260275 -132056490 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 309 353 25 0 chr10 8261193 8261315 -132055450 - MIR SINE MIR -45 217 93 187 330 45 36 chr10 8261324 8261436 -132055329 + L2 LINE L2 3201 3313 0 892 221 96 12 chr10 8261818 8262058 -132054707 - MLT1D LTR MaLR -39 466 207 2457 65 0 0 chr10 8262689 8262999 -132053766 + AluY SINE Alu 1 310 -1 2154 111 10 0 chr10 8264065 8264372 -132052393 + AluSx SINE Alu 1 310 -2 1495 159 8 8 chr10 8265279 8265537 -132051228 - AluJb SINE Alu -54 258 1 2278 100 0 0 chr10 8265638 8265978 -132050787 + AluSc SINE Alu 1 340 0 504 198 159 32 chr10 8266594 8266720 -132050045 - MIR SINE MIR -19 243 102 1933 116 0 10 chr10 8266785 8267077 -132049688 - AluSx SINE Alu -1 311 23 988 153 47 0 chr10 8267362 8267532 -132049233 - AluJo SINE Alu -131 181 4 2122 107 0 0 chr10 8267771 8268061 -132048704 + AluSc SINE Alu 2 291 -18 1721 142 0 37 chr10 8268073 8268396 -132048369 + AluJo SINE Alu 1 311 -1 28 29 0 0 chr10 8268951 8268986 -132047779 + AT_rich Low_complexity Low_complexity 1 35 0 1753 150 0 32 chr10 8268986 8269299 -132047466 + AluSx SINE Alu 1 303 -9 1492 166 7 25 chr10 8269318 8269595 -132047170 - AluJo SINE Alu -40 272 1 1814 62 25 16 chr10 8269977 8270221 -132046544 - L1PA10 LINE L1 -3 6165 5920 21 0 0 0 chr10 8270257 8270278 -132046487 + AT_rich Low_complexity Low_complexity 1 21 0 1436 196 13 16 chr10 8270873 8271179 -132045586 + AluJo SINE Alu 1 305 -7 2136 92 0 0 chr10 8271444 8271727 -132045038 - AluSg SINE Alu -27 283 1 382 298 0 0 chr10 8272676 8272770 -132043995 + MIR SINE MIR 169 262 0 879 105 0 53 chr10 8272785 8272918 -132043847 + FLAM_C SINE Alu 2 127 -6 1208 154 112 63 chr10 8272956 8273242 -132043523 + AluSp SINE Alu 1 300 -3 278 139 23 0 chr10 8273244 8273287 -132043478 + AluJ/F(R)AM SINE Alu 168 211 -91 1223 110 0 16 chr10 8273319 8273501 -132043264 + AluSg/x SINE Alu 132 310 0 2006 132 0 0 chr10 8274453 8274741 -132042024 + AluSx SINE Alu 1 288 -24 778 149 0 22 chr10 8274874 8275008 -132041757 + FLAM_C SINE Alu 1 131 -2 28 0 0 0 chr10 8276121 8276149 -132040616 + AT_rich Low_complexity Low_complexity 1 28 0 1871 126 0 4 chr10 8276151 8276429 -132040336 + AluSx SINE Alu 3 279 -33 1322 154 14 0 chr10 8276460 8276674 -132040091 + AluSg/x SINE Alu 86 302 -10 218 310 42 0 chr10 8276737 8276808 -132039957 + MIR SINE MIR 111 184 -78 227 167 368 53 chr10 8276876 8276990 -132039775 + L2 LINE L2 3164 3313 0 396 246 70 91 chr10 8277002 8277201 -132039564 - MIR SINE MIR -4 258 64 285 212 273 0 chr10 8278013 8278112 -132038653 + L1ME4a LINE L1 5996 6121 0 405 0 0 0 chr10 8278270 8278315 -132038450 + (CCAA)n Simple_repeat Simple_repeat 2 46 0 2005 128 3 0 chr10 8278394 8278691 -132038074 - AluSx SINE Alu -14 298 1 263 94 0 19 chr10 8278697 8278750 -132038015 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 1565 179 14 10 chr10 8278752 8279048 -132037717 - AluJb SINE Alu -15 297 1 25 31 0 0 chr10 8279272 8279304 -132037461 + AT_rich Low_complexity Low_complexity 1 32 0 704 50 0 40 chr10 8279675 8279775 -132036990 + L1PA5 LINE L1 6059 6154 0 235 384 47 6 chr10 8280065 8280237 -132036528 + MIR3 SINE MIR 28 206 -2 207 217 43 0 chr10 8280610 8280656 -132036109 + MIR SINE MIR 96 143 -65 1886 135 0 42 chr10 8280718 8281030 -132035735 - AluSg SINE Alu -11 299 1 2093 101 0 0 chr10 8282004 8282290 -132034475 - AluSg SINE Alu -4 306 21 1493 167 27 38 chr10 8282331 8282624 -132034141 + AluJb SINE Alu 1 290 -22 2753 151 11 6 chr10 8285563 8286039 -132030726 - L1PA15 LINE L1 0 6165 5688 668 301 51 9 chr10 8286039 8286255 -132030510 + MIR SINE MIR 23 247 -15 335 317 18 41 chr10 8286588 8286809 -132029956 - HAL1 LINE L1 0 2507 2292 882 182 17 17 chr10 8286839 8287020 -132029745 + MER53 DNA DNA 1 181 -8 600 231 88 6 chr10 8287021 8287181 -132029584 - FAM SINE Alu -2 173 1 33 69 0 30 chr10 8288088 8288121 -132028644 + AT_rich Low_complexity Low_complexity 1 33 -65 2181 67 3 20 chr10 8288121 8288418 -132028347 - AluY SINE Alu -19 292 1 33 69 0 30 chr10 8288418 8288485 -132028280 + AT_rich Low_complexity Low_complexity 33 98 0 1733 140 13 33 chr10 8288689 8288996 -132027769 - AluJo SINE Alu -11 301 1 1917 116 0 41 chr10 8289926 8290251 -132026514 + AluSx SINE Alu 1 313 0 364 289 159 15 chr10 8290463 8290664 -132026101 + MIR SINE MIR 9 238 -24 797 146 8 0 chr10 8291253 8291383 -132025382 + AluSg/x SINE Alu 182 312 0 513 0 0 0 chr10 8291661 8291718 -132025047 + (TTTA)n Simple_repeat Simple_repeat 3 59 0 1655 156 0 32 chr10 8291724 8292007 -132024758 - AluJo SINE Alu -38 274 1 228 122 0 0 chr10 8292640 8292681 -132024084 + (CA)n Simple_repeat Simple_repeat 1 41 0 314 234 317 0 chr10 8292863 8293008 -132023757 - MIR SINE MIR -61 201 11 340 354 48 7 chr10 8293015 8293162 -132023603 - MIR3 SINE MIR -33 175 23 1022 146 6 0 chr10 8293913 8294078 -132022687 - AluJb SINE Alu -11 301 136 619 284 83 17 chr10 8294437 8294667 -132022098 - MIR SINE MIR -13 249 4 1601 178 7 3 chr10 8295109 8295401 -132021364 + AluJo SINE Alu 1 293 -19 1910 139 0 3 chr10 8295403 8295691 -132021074 + AluSg SINE Alu 1 287 -23 198 118 0 0 chr10 8295704 8295738 -132021027 + (CAAAAA)n Simple_repeat Simple_repeat 4 37 0 359 278 35 66 chr10 8295747 8295945 -132020820 - MIR3 SINE MIR -15 193 2 1778 152 20 3 chr10 8296734 8297030 -132019735 - AluJb SINE Alu -11 301 1 273 269 0 0 chr10 8297078 8297130 -132019635 + AluJ/monomer SINE Alu 1 52 -248 222 220 0 0 chr10 8297467 8297526 -132019239 + A-rich Low_complexity Low_complexity 1 59 0 237 65 0 0 chr10 8297935 8297966 -132018799 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 2393 61 3 3 chr10 8299041 8299352 -132017413 + AluY SINE Alu 1 311 0 2068 109 0 3 chr10 8299982 8300276 -132016489 + AluSx SINE Alu 9 301 -11 300 279 30 79 chr10 8302592 8302757 -132014008 - MIR SINE MIR -46 216 60 2410 66 0 0 chr10 8304369 8304671 -132012094 + AluSg SINE Alu 1 302 -8 1983 126 10 3 chr10 8304702 8305003 -132011762 + AluSx SINE Alu 1 303 -9 23 54 0 0 chr10 8305628 8305665 -132011100 + AT_rich Low_complexity Low_complexity 1 37 0 512 321 101 42 chr10 8306032 8306645 -132010120 - L2 LINE L2 -1 3312 2668 977 296 302 24 chr10 8306749 8308272 -132008493 - L2 LINE L2 -1296 2018 72 994 154 56 2 chr10 8308556 8308843 -132007922 + MER2 DNA MER2_type 1 345 0 1469 171 7 36 chr10 8308970 8309245 -132007520 + AluJo SINE Alu 1 267 -45 42 0 0 0 chr10 8309259 8309301 -132007464 + AT_rich Low_complexity Low_complexity 1 42 0 429 20 0 0 chr10 8309306 8309356 -132007409 + (TG)n Simple_repeat Simple_repeat 2 51 0 540 234 170 23 chr10 8310460 8310678 -132006087 - MER112 DNA MER1_type -3 257 8 26 0 0 0 chr10 8312244 8312270 -132004495 + AT_rich Low_complexity Low_complexity 1 26 0 183 42 0 0 chr10 8312592 8312616 -132004149 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr10 8314025 8314046 -132002719 + AT_rich Low_complexity Low_complexity 1 21 0 2199 108 23 3 chr10 8314528 8314834 -132001931 + AluSq SINE Alu 1 312 -1 664 106 0 58 chr10 8314938 8315042 -132001723 + AluJ/FLAM SINE Alu 1 98 -214 406 236 87 24 chr10 8317205 8317332 -131999433 + L2 LINE L2 3173 3307 -6 1323 171 148 4 chr10 8318406 8318670 -131998095 - AluJb SINE Alu 0 302 1 1539 191 24 3 chr10 8318926 8319220 -131997545 + AluJb SINE Alu 1 300 -12 27 49 0 0 chr10 8319830 8319871 -131996894 + AT_rich Low_complexity Low_complexity 1 41 0 466 269 99 60 chr10 8320169 8320370 -131996395 - MIR SINE MIR -51 211 3 207 211 19 0 chr10 8321450 8321502 -131995263 + GA-rich Low_complexity Low_complexity 2 54 0 1852 177 0 7 chr10 8321676 8321986 -131994779 - AluJb SINE Alu -4 308 1 405 226 169 16 chr10 8322857 8322981 -131993784 + HsTC2 DNA Tc2 2 144 -1754 * 1198 229 108 20 chr10 8322979 8323386 -131993379 + HsTC2 DNA Tc2 1282 1900 0 1687 157 0 41 chr10 8323443 8323763 -131993002 - AluSx SINE Alu 0 308 1 780 304 170 23 chr10 8324052 8324215 -131992550 - L2 LINE L2 0 3313 3175 2024 125 7 0 chr10 8324215 8324534 -131992231 + AluSx SINE Alu 1 321 0 2203 63 45 0 chr10 8324536 8324823 -131991942 + AluY SINE Alu 1 300 -11 780 304 170 23 chr10 8324823 8325312 -131991453 - L2 LINE L2 -138 3175 2553 5833 148 16 16 chr10 8325729 8326868 -131989897 - L1MC1 LINE L1 0 6333 5196 568 304 44 5 chr10 8326957 8327161 -131989604 - MIR SINE MIR -8 254 43 529 351 67 33 chr10 8327530 8328049 -131988716 - L2 LINE L2 -650 2664 2128 289 277 225 8 chr10 8328093 8328342 -131988423 + HAL1 LINE L1 16 318 -2189 1416 276 161 21 chr10 8328546 8328798 -131987967 + HAL1 LINE L1 640 855 -1652 396 0 0 0 chr10 8328798 8328842 -131987923 + (CA)n Simple_repeat Simple_repeat 2 45 0 1416 276 161 21 chr10 8328842 8329524 -131987241 + HAL1 LINE L1 855 1705 -802 180 242 0 0 chr10 8329659 8329692 -131987073 - L2 LINE L2 -86 3186 3154 2080 142 9 22 chr10 8329893 8330209 -131986556 + AluJo SINE Alu 1 312 0 198 250 0 0 chr10 8330495 8330539 -131986226 + L2 LINE L2 3265 3308 -5 247 301 16 75 chr10 8331960 8332146 -131984619 - Charlie8 DNA MER1_type -2230 187 13 216 315 71 54 chr10 8332168 8332352 -131984413 + L2 LINE L2 2542 2728 -586 387 0 0 0 chr10 8333314 8333357 -131983408 + (TG)n Simple_repeat Simple_repeat 2 44 0 433 315 164 25 chr10 8334807 8335210 -131981555 + L2 LINE L2 2855 3313 0 236 312 239 4 chr10 8335321 8335568 -131981197 + L2 LINE L2 2670 2974 -340 1826 181 3 3 chr10 8335662 8335966 -131980799 + AluJb SINE Alu 1 304 -8 798 154 0 0 chr10 8336152 8336282 -131980483 - FLAM_C SINE Alu -3 130 1 181 331 94 24 chr10 8336338 8336465 -131980300 + L2 LINE L2 2034 2169 -1145 555 305 159 11 chr10 8336547 8337044 -131979721 - L2 LINE L2 -25 3288 2713 1601 166 3 86 chr10 8337286 8337611 -131979154 - AluJo SINE Alu -14 298 1 341 168 25 134 chr10 8338853 8338972 -131977793 - HsTC2b DNA Tc2 -2 916 811 597 271 33 11 chr10 8339007 8339188 -131977577 - HsTC2b DNA Tc2 -686 229 45 220 363 25 55 chr10 8339425 8339626 -131977139 - L2 LINE L2 -251 3062 2868 2342 193 55 4 chr10 8339888 8340411 -131976354 - MER82 DNA MER2_type -94 559 10 582 224 104 37 chr10 8340449 8340913 -131975852 - MLT1H LTR MaLR -16 533 12 180 250 120 30 chr10 8340987 8341087 -131975678 - MIR SINE MIR -89 173 65 236 280 101 0 chr10 8342690 8342811 -131973954 - MIR3 SINE MIR -65 143 10 413 211 72 53 chr10 8345211 8345419 -131971346 + L1MC4 LINE L1 7831 8042 0 26 0 0 27 chr10 8345419 8345430 -131971335 + AT_rich Low_complexity Low_complexity 1 11 -25 2168 109 3 0 chr10 8345430 8345715 -131971050 + AluSg SINE Alu 1 286 -24 26 0 0 27 chr10 8345715 8345740 -131971025 + AT_rich Low_complexity Low_complexity 11 36 0 21 36 0 0 chr10 8346842 8346870 -131969895 + AT_rich Low_complexity Low_complexity 1 28 0 297 0 0 0 chr10 8347017 8347050 -131969715 + (TC)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr10 8347119 8347140 -131969625 + AT_rich Low_complexity Low_complexity 1 21 0 39 38 0 0 chr10 8347525 8347578 -131969187 + AT_rich Low_complexity Low_complexity 1 53 0 483 229 62 3 chr10 8347619 8347769 -131968996 + L1ME3A LINE L1 5790 5946 -224 2238 82 0 20 chr10 8348075 8348361 -131968404 + AluY SINE Alu 1 282 -29 216 0 0 0 chr10 8348361 8348385 -131968380 + (CA)n Simple_repeat Simple_repeat 1 24 0 193 122 0 61 chr10 8348709 8348758 -131968007 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 358 107 0 18 chr10 8349577 8349633 -131967132 - MER58 DNA MER1_type 0 2420 2366 333 356 109 24 chr10 8349651 8349898 -131966867 - L2 LINE L2 -172 3100 2833 2032 162 0 3 chr10 8351063 8351371 -131965394 - AluJb SINE Alu -5 307 1 190 218 73 0 chr10 8352193 8352248 -131964517 - MIR SINE MIR -60 148 90 1828 91 0 8 chr10 8352788 8353042 -131963723 + L1PA6 LINE L1 5903 6154 0 243 265 0 0 chr10 8354329 8354431 -131962334 + GA-rich Low_complexity Low_complexity 4 105 0 187 197 0 28 chr10 8354579 8354650 -131962115 + GA-rich Low_complexity Low_complexity 2 70 0 542 159 28 28 chr10 8354802 8354947 -131961818 + GA-rich Low_complexity Low_complexity 6 150 0 22 35 0 0 chr10 8356168 8356197 -131960568 + AT_rich Low_complexity Low_complexity 1 29 0 321 208 62 92 chr10 8356244 8356374 -131960391 - MIR SINE MIR -70 192 67 195 232 116 29 chr10 8356895 8356964 -131959801 + MIR SINE MIR 176 250 -12 723 244 87 30 chr10 8357798 8358028 -131958737 - MIR SINE MIR -19 243 1 1113 193 193 12 chr10 8358248 8358360 -131958405 + AluJo SINE Alu 1 91 -211 279 0 0 0 chr10 8358360 8358391 -131958374 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1113 193 193 12 chr10 8358391 8358527 -131958238 + AluJo SINE Alu 91 294 -8 22 35 0 0 chr10 8358656 8358685 -131958080 + AT_rich Low_complexity Low_complexity 1 29 0 254 199 15 31 chr10 8359008 8359083 -131957682 + MIR SINE MIR 12 85 -123 320 252 70 0 chr10 8359540 8359655 -131957110 - MIR SINE MIR -45 217 95 235 296 12 0 chr10 8359820 8359901 -131956864 - MIR3 SINE MIR -2 206 125 347 228 152 0 chr10 8361658 8361750 -131955015 - MER94 DNA DNA -10 124 19 259 293 199 18 chr10 8362217 8362436 -131954329 + MIR SINE MIR 7 262 0 213 170 21 21 chr10 8362883 8362930 -131953835 + L2 LINE L2 3214 3260 -12 2054 122 0 0 chr10 8363068 8363347 -131953418 + AluSg SINE Alu 1 279 -31 432 37 0 0 chr10 8363350 8363404 -131953361 + (CA)n Simple_repeat Simple_repeat 2 55 0 2371 87 7 0 chr10 8364012 8364311 -131952454 + AluSc SINE Alu 1 301 -8 220 316 38 0 chr10 8364593 8364672 -131952093 - L2 LINE L2 -24 3289 3208 185 309 15 15 chr10 8364835 8364903 -131951862 - L2 LINE L2 -8 3264 3197 261 281 0 0 chr10 8365128 8365203 -131951562 + MER20 DNA MER1_type 118 196 -23 1297 128 0 15 chr10 8365453 8365632 -131951133 - AluSg/x SINE Alu 0 312 135 2113 94 45 3 chr10 8365632 8365920 -131950845 - AluY SINE Alu -11 300 1 1297 128 0 15 chr10 8365920 8365935 -131950830 - AluSg/x SINE Alu -177 135 121 242 239 0 0 chr10 8366869 8366915 -131949850 - L2 LINE L2 -90 3182 3137 1754 152 24 14 chr10 8366988 8367284 -131949481 + AluJo SINE Alu 1 299 -13 277 346 155 30 chr10 8367489 8367818 -131948947 - L2 LINE L2 -548 2766 2397 691 190 0 0 chr10 8368280 8368396 -131948369 - FRAM SINE Alu -20 156 41 23 0 0 0 chr10 8368492 8368515 -131948250 + AT_rich Low_complexity Low_complexity 1 23 0 2462 72 0 13 chr10 8368653 8368957 -131947808 + AluSp SINE Alu 1 300 -13 630 226 0 0 chr10 8370046 8370161 -131946604 + AluJb SINE Alu 2 116 -196 240 86 0 0 chr10 8370164 8370199 -131946566 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 906 127 95 104 chr10 8370741 8370962 -131945803 - AluJo SINE Alu -19 293 75 2549 66 0 3 chr10 8370962 8371267 -131945498 - AluY SINE Alu -5 306 3 524 250 0 0 chr10 8371979 8372095 -131944670 + FRAM SINE Alu 41 156 -20 277 346 155 30 chr10 8372557 8372886 -131943879 + L2 LINE L2 2397 2766 -548 1754 152 24 14 chr10 8373091 8373387 -131943378 - AluJo SINE Alu -13 299 1 242 239 0 0 chr10 8373460 8373506 -131943259 + L2 LINE L2 3137 3182 -90 662 66 72 12 chr10 8374136 8374302 -131942463 + (TCTA)n Simple_repeat Simple_repeat 4 179 0 730 83 59 12 chr10 8374340 8374509 -131942256 + (TCTA)n Simple_repeat Simple_repeat 1 177 0 464 198 0 0 chr10 8374509 8374590 -131942175 - FLAM_A SINE Alu -22 120 40 2212 113 0 0 chr10 8375011 8375303 -131941462 - AluSx SINE Alu -9 303 12 1569 161 73 11 chr10 8375492 8375808 -131940957 + AluJb SINE Alu 1 312 0 419 241 169 76 chr10 8376926 8377019 -131939746 - L2 LINE L2 -860 2454 2371 1142 112 0 6 chr10 8377019 8377198 -131939567 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 1481 175 34 11 chr10 8377204 8377472 -131939293 - AluSx SINE Alu -38 274 1 1002 192 12 0 chr10 8377475 8377647 -131939118 - FAM SINE Alu -1 174 1 419 241 169 76 chr10 8377647 8377832 -131938933 - L2 LINE L2 -948 2366 2138 808 126 0 44 chr10 8378389 8378524 -131938241 - FLAM_C SINE Alu 0 133 5 1621 168 8 0 chr10 8379057 8379319 -131937446 + AluJo SINE Alu 27 290 -22 250 287 0 25 chr10 8379925 8380025 -131936740 - MIR SINE MIR -62 146 63 188 283 62 26 chr10 8381191 8381304 -131935461 + MIR SINE MIR 90 206 -56 324 301 29 0 chr10 8381348 8381451 -131935314 + MIR SINE MIR 131 236 -26 2061 137 7 10 chr10 8381830 8382136 -131934629 - AluJb SINE Alu -7 305 1 359 237 43 21 chr10 8382174 8382267 -131934498 + L2 LINE L2 3197 3291 -22 444 106 77 135 chr10 8383107 8383157 -131933608 + HY3 scRNA scRNA 1 43 -58 1951 154 3 10 chr10 8383157 8383468 -131933297 - AluJo SINE Alu -3 309 1 444 106 77 135 chr10 8383468 8383521 -131933244 + HY3 scRNA scRNA 43 98 -3 2024 155 30 0 chr10 8383625 8383928 -131932837 - AluSx SINE Alu 0 312 1 260 227 41 21 chr10 8384211 8384308 -131932457 + CT-rich Low_complexity Low_complexity 4 102 0 312 273 132 34 chr10 8385331 8385536 -131931229 - MER112 DNA MER1_type -23 237 13 402 253 156 21 chr10 8385691 8385928 -131930837 - L1ME4a LINE L1 -1 6120 5852 2382 100 0 0 chr10 8385968 8386279 -131930486 + AluSq SINE Alu 1 311 -2 1593 149 31 35 chr10 8386606 8386867 -131929898 - AluJo SINE Alu -50 262 3 2003 143 0 19 chr10 8387028 8387335 -131929430 - AluSx SINE Alu -11 301 1 225 278 31 10 chr10 8388841 8388938 -131927827 + GA-rich Low_complexity Low_complexity 5 103 0 255 236 0 0 chr10 8389226 8389298 -131927467 + (CA)n Simple_repeat Simple_repeat 2 73 0 2202 110 0 10 chr10 8389308 8389618 -131927147 - AluSx SINE Alu -5 307 1 332 291 10 65 chr10 8390705 8390765 -131926000 - MER5A DNA MER1_type -1 188 126 1808 147 3 52 chr10 8390765 8391072 -131925693 + AluJo SINE Alu 1 292 -20 332 291 10 65 chr10 8391072 8391210 -131925555 - MER5A DNA MER1_type -63 126 1 209 33 33 0 chr10 8392794 8392824 -131923941 + (CCCCCA)n Simple_repeat Simple_repeat 6 36 0 23 54 0 0 chr10 8392868 8392905 -131923860 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 8393272 8393293 -131923472 + AT_rich Low_complexity Low_complexity 1 21 0 1576 199 31 0 chr10 8393601 8393887 -131922878 - AluJb SINE Alu -17 295 1 376 306 25 0 chr10 8396712 8396833 -131919932 + MIR SINE MIR 28 151 -111 702 77 0 0 chr10 8396840 8396931 -131919834 - AluY SINE Alu -16 295 205 271 260 31 10 chr10 8396936 8397032 -131919733 + MIR SINE MIR 150 247 -15 629 270 54 5 chr10 8397543 8397728 -131919037 + MIR SINE MIR 59 252 -10 415 188 77 60 chr10 8398297 8398414 -131918351 - HAL1 LINE L1 0 2507 2389 717 142 35 0 chr10 8398422 8398535 -131918230 - FLAM_A SINE Alu -10 132 16 983 249 127 53 chr10 8398536 8398907 -131917858 - HAL1 LINE L1 -127 2380 2038 2180 126 0 13 chr10 8398907 8399217 -131917548 + AluSx SINE Alu 1 306 -6 983 249 127 53 chr10 8399217 8399491 -131917274 - HAL1 LINE L1 -469 2038 1687 703 212 53 11 chr10 8399488 8399677 -131917088 - HAL1 LINE L1 -1042 1465 1269 * 461 167 8 92 chr10 8399680 8399800 -131916965 - FRAM SINE Alu -7 169 60 278 282 76 13 chr10 8400079 8400215 -131916550 - MIR3 SINE MIR -14 194 51 1987 135 0 44 chr10 8400371 8400689 -131916076 + AluJo SINE Alu 1 304 -8 743 176 7 54 chr10 8400738 8400886 -131915879 + FLAM_C SINE Alu 2 142 -1 731 191 5 53 chr10 8401894 8402082 -131914683 - MER53 DNA DNA 0 189 11 29 0 0 0 chr10 8402211 8402240 -131914525 + AT_rich Low_complexity Low_complexity 1 29 0 686 203 16 0 chr10 8402240 8402363 -131914402 - FLAM_C SINE Alu -17 126 2 979 178 0 0 chr10 8402555 8402707 -131914058 + FRAM SINE Alu 5 156 -10 239 333 15 0 chr10 8402975 8403041 -131913724 + (CACG)n Simple_repeat Simple_repeat 4 70 0 240 86 0 0 chr10 8403041 8403076 -131913689 + (TC)n Simple_repeat Simple_repeat 1 35 0 524 320 50 11 chr10 8403748 8404029 -131912736 + L1ME4a LINE L1 5625 5916 -205 303 262 66 16 chr10 8404157 8404279 -131912486 + L1ME4a LINE L1 5985 6112 -9 1314 107 11 0 chr10 8404547 8404724 -131912041 + AluSq SINE Alu 1 179 -134 388 133 0 0 chr10 8404724 8404784 -131911981 - AluS SINE Alu -248 60 1 2275 78 10 0 chr10 8405387 8405681 -131911084 - AluY SINE Alu -14 297 1 2331 106 3 0 chr10 8405900 8406202 -131910563 + AluSx SINE Alu 1 303 -9 2228 105 0 3 chr10 8406388 8406683 -131910082 + AluSg SINE Alu 8 301 -9 993 172 0 22 chr10 8406704 8406884 -131909881 - L1MC1 LINE L1 -190 6126 5951 887 114 0 0 chr10 8406884 8406998 -131909767 - AluJo SINE Alu -20 292 179 823 183 8 0 chr10 8406997 8407128 -131909637 - AluJo SINE Alu -179 133 2 * 4100 153 3 16 chr10 8407130 8407823 -131908942 - L1MC1 LINE L1 -358 5958 5275 395 159 0 0 chr10 8408659 8408728 -131908037 - L1M LINE L1 -984 5343 5275 215 191 95 0 chr10 8409732 8409774 -131906991 + L2 LINE L2 3175 3220 -52 212 274 89 44 chr10 8409819 8409954 -131906811 - L2 LINE L2 -11 3302 3162 265 174 0 0 chr10 8410048 8410094 -131906671 - L1MC/D LINE L1 -1934 5851 5806 237 133 61 20 chr10 8410101 8410199 -131906566 + (TCTA)n Simple_repeat Simple_repeat 1 102 0 507 252 35 0 chr10 8410476 8410591 -131906174 + LTR67 LTR ERVL 399 517 -40 2560 118 74 22 chr10 8412216 8412623 -131904142 - MSTA LTR MaLR 0 428 1 270 0 0 0 chr10 8413173 8413203 -131903562 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2142 111 40 7 chr10 8415051 8415349 -131901416 - AluSc SINE Alu -1 308 1 3887 76 38 0 chr10 8416694 8417194 -131899571 + L1PA13 LINE L1 5642 6160 -3 1112 257 40 81 chr10 8417274 8417457 -131899308 + L2 LINE L2 1997 2186 -1128 2186 131 0 0 chr10 8417457 8417755 -131899010 - AluSx SINE Alu -14 298 1 1112 257 40 81 chr10 8417755 8418042 -131898723 + L2 LINE L2 2186 2448 -866 959 276 99 14 chr10 8418045 8418397 -131898368 + L2 LINE L2 2238 2619 -695 1740 146 46 4 chr10 8418468 8418748 -131898017 - AluJb SINE Alu -20 292 1 478 319 13 4 chr10 8418773 8419005 -131897760 - L1MC1 LINE L1 -943 5186 4953 * 1218 288 59 48 chr10 8419001 8419640 -131897125 - L1MC1 LINE L1 -3270 2859 2225 2303 140 28 8 chr10 8419640 8419997 -131896768 - THE1B LTR MaLR 0 364 1 1218 288 59 48 chr10 8419997 8420195 -131896570 - L1MC1 LINE L1 -3904 2225 2031 935 254 68 66 chr10 8420450 8421460 -131895305 - L1MC1 LINE L1 -4646 1664 604 221 172 16 0 chr10 8421943 8422007 -131894758 + (TA)n Simple_repeat Simple_repeat 1 65 0 261 0 0 0 chr10 8422012 8422041 -131894724 + (TG)n Simple_repeat Simple_repeat 2 30 0 245 276 63 87 chr10 8422120 8422247 -131894518 - L2 LINE L2 -15 3257 3134 1816 168 3 3 chr10 8422264 8422556 -131894209 - AluJo SINE Alu -20 292 1 345 129 0 0 chr10 8422918 8422988 -131893777 + (TG)n Simple_repeat Simple_repeat 1 70 0 1152 247 57 46 chr10 8422988 8423377 -131893388 - MLT2C2 LTR ERVL -71 393 1 1054 164 0 23 chr10 8423638 8423809 -131892956 + AluJb SINE Alu 121 287 -25 213 39 0 0 chr10 8423814 8423840 -131892925 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 876 195 197 82 chr10 8423967 8424447 -131892318 + MLT1F1 LTR MaLR 1 565 -2 407 240 0 8 chr10 8424784 8424892 -131891873 + (CA)n Simple_repeat Simple_repeat 2 110 -11 1858 157 7 7 chr10 8424892 8425186 -131891579 - AluSx SINE Alu -18 294 1 407 240 0 8 chr10 8425186 8425198 -131891567 + (CA)n Simple_repeat Simple_repeat 110 121 0 219 295 66 0 chr10 8425215 8425276 -131891489 - MER91A DNA MER1_type -3 193 129 581 310 38 0 chr10 8425342 8425500 -131891265 - MER91A DNA MER1_type -20 176 13 1722 171 17 0 chr10 8427344 8427637 -131889128 + AluJo SINE Alu 1 298 -14 2000 155 0 10 chr10 8427697 8428007 -131888758 - AluSx SINE Alu -5 307 1 180 77 0 0 chr10 8428033 8428059 -131888706 + (CA)n Simple_repeat Simple_repeat 1 26 0 1850 167 0 7 chr10 8428934 8429234 -131887531 + AluJo SINE Alu 1 298 -14 2178 124 0 0 chr10 8429373 8429672 -131887093 - AluSq SINE Alu -14 299 1 1592 170 12 8 chr10 8429759 8430018 -131886747 - AluJo SINE Alu -52 260 1 198 0 0 0 chr10 8430203 8430225 -131886540 + (TA)n Simple_repeat Simple_repeat 2 23 0 1926 137 0 14 chr10 8430874 8431158 -131885607 + AluSc SINE Alu 1 280 -29 317 361 16 0 chr10 8431337 8431459 -131885306 - MIR3 SINE MIR -38 170 47 1995 92 8 0 chr10 8431619 8431881 -131884884 - L1PA10 LINE L1 -12 6156 5893 5163 71 3 3 chr10 8432204 8432836 -131883929 - L1PA10 LINE L1 -12 6156 5525 350 308 47 35 chr10 8434357 8434529 -131882236 + MIR3 SINE MIR 17 190 -18 290 292 10 10 chr10 8434983 8435079 -131881686 + MER103 DNA DNA 37 132 -34 331 266 105 21 chr10 8435163 8435306 -131881459 + L1M4 LINE L1 5075 5229 -917 361 296 108 11 chr10 8436903 8437079 -131879686 - MIR SINE MIR -23 239 47 2090 94 0 4 chr10 8437084 8437351 -131879414 + AluSx SINE Alu 36 301 -11 340 318 162 1 chr10 8437669 8437828 -131878937 - MIR SINE MIR -70 138 14 248 216 20 0 chr10 8437826 8437877 -131878888 + L2 LINE L2 3262 3313 0 * 1753 179 7 0 chr10 8437917 8438208 -131878557 - AluSx SINE Alu -18 294 2 1901 154 0 7 chr10 8438277 8438575 -131878190 + AluJo SINE Alu 17 312 0 1527 190 30 23 chr10 8439213 8439518 -131877247 - AluJb SINE Alu -5 307 1 258 347 24 45 chr10 8440168 8440312 -131876453 + MIR3 SINE MIR 40 181 -27 253 182 23 0 chr10 8440395 8440439 -131876326 - MER57A LTR ERV1 -64 339 295 216 348 90 23 chr10 8440852 8441151 -131875614 - L2 LINE L2 -340 2974 2656 1066 145 60 20 chr10 8441155 8441188 -131875577 + AluSg/x SINE Alu 86 116 -193 1884 84 0 8 chr10 8441188 8441453 -131875312 + AluSq SINE Alu 51 313 0 1066 145 60 20 chr10 8441453 8441618 -131875147 + AluSg/x SINE Alu 116 293 -16 381 328 85 48 chr10 8441724 8442017 -131874748 - L2 LINE L2 -862 2452 2149 220 312 50 50 chr10 8442380 8442521 -131874244 - L2 LINE L2 -1635 1679 1539 1422 168 45 63 chr10 8442622 8442961 -131873804 + AluJb SINE Alu 1 334 0 743 144 0 0 chr10 8443149 8443253 -131873512 + FRAM SINE Alu 49 152 -24 209 338 54 0 chr10 8443267 8443341 -131873424 - L2 LINE L2 -2 3311 3234 334 321 3 8 chr10 8443473 8443594 -131873171 + MIR SINE MIR 51 170 -62 1956 133 85 20 chr10 8443616 8443968 -131872797 + THE1C LTR MaLR 1 375 0 195 139 0 0 chr10 8444288 8444324 -131872441 + (TTCA)n Simple_repeat Simple_repeat 4 39 0 1786 187 0 13 chr10 8444429 8444745 -131872020 + AluJo SINE Alu 1 312 0 497 272 69 13 chr10 8444909 8445127 -131871638 - MIR SINE MIR -13 249 19 1691 120 0 154 chr10 8445216 8445573 -131871192 - AluJb SINE Alu -10 302 1 757 229 67 48 chr10 8445675 8445989 -131870776 + L1MC5 LINE L1 7631 7950 -11 324 336 49 8 chr10 8446171 8446293 -131870472 + MIR3 SINE MIR 74 200 -8 1729 142 26 8 chr10 8447094 8447391 -131869374 + AluJo SINE Alu 12 313 0 1109 159 17 0 chr10 8447787 8447963 -131868802 - AluJ SINE Alu 0 312 134 2077 118 4 0 chr10 8447963 8448243 -131868522 - AluSx SINE Alu -13 299 19 1824 112 20 58 chr10 8448477 8448798 -131867967 - AluSx SINE Alu 0 310 1 318 167 0 0 chr10 8448816 8448876 -131867889 + CT-rich Low_complexity Low_complexity 2 61 0 904 153 8 0 chr10 8448876 8449007 -131867758 - AluJ SINE Alu -169 133 2 1488 171 3 49 chr10 8449402 8449688 -131867077 - AluJb SINE Alu -39 273 1 26 30 0 0 chr10 8449695 8449728 -131867037 + AT_rich Low_complexity Low_complexity 1 33 0 833 163 8 0 chr10 8449730 8449853 -131866912 - FLAM_C SINE Alu -18 125 2 853 299 68 35 chr10 8449998 8450516 -131866249 + L1ME4a LINE L1 5392 5926 -195 2034 136 7 3 chr10 8450641 8450935 -131865830 + AluSx SINE Alu 1 295 -17 2363 96 3 0 chr10 8451014 8451317 -131865448 + AluSp SINE Alu 1 304 -9 204 274 71 12 chr10 8451596 8451680 -131865085 - MIR SINE MIR -111 151 63 491 164 4 246 chr10 8452198 8452286 -131864479 - MER5A DNA MER1_type -13 176 176 1991 101 19 0 chr10 8452286 8452554 -131864211 - AluSx SINE Alu -18 294 22 491 164 4 246 chr10 8452554 8452697 -131864068 - MER5A DNA MER1_type -12 177 1 211 85 43 0 chr10 8453068 8453115 -131863650 + (TA)n Simple_repeat Simple_repeat 2 50 0 25 0 0 0 chr10 8453115 8453140 -131863625 + AT_rich Low_complexity Low_complexity 1 25 0 204 314 0 0 chr10 8453520 8453571 -131863194 + L3 LINE CR1 1516 1566 -11 2193 109 0 3 chr10 8453630 8453924 -131862841 + AluSq SINE Alu 5 297 -16 21 0 0 0 chr10 8454145 8454166 -131862599 + AT_rich Low_complexity Low_complexity 1 21 0 4698 123 11 32 chr10 8454546 8454804 -131861961 - L1PB4 LINE L1 0 6156 5894 2102 133 0 0 chr10 8454804 8455098 -131861667 - AluY SINE Alu -17 294 1 4698 123 11 32 chr10 8455098 8455621 -131861144 - L1PB4 LINE L1 -262 5894 5391 260 307 23 0 chr10 8456039 8456127 -131860638 + GA-rich Low_complexity Low_complexity 1 90 0 22 0 0 0 chr10 8456550 8456572 -131860193 + AT_rich Low_complexity Low_complexity 1 22 0 1603 205 0 7 chr10 8456688 8456990 -131859775 + AluJo SINE Alu 2 301 -11 1975 137 13 10 chr10 8457861 8458168 -131858597 + AluSx SINE Alu 5 312 0 222 218 0 0 chr10 8458193 8458248 -131858517 + A-rich Low_complexity Low_complexity 1 55 0 766 156 0 71 chr10 8458544 8458685 -131858080 + FLAM_C SINE Alu 1 131 -2 1337 198 41 36 chr10 8458742 8459191 -131857574 - Charlie1b DNA MER1_type 0 523 1 2449 88 0 0 chr10 8459972 8460277 -131856488 - AluSc SINE Alu -4 305 1 287 318 86 75 chr10 8460643 8460923 -131855842 - L2 LINE L2 -5 3267 2985 446 279 89 26 chr10 8460990 8461180 -131855585 - MLT1K LTR MaLR -9 579 378 875 201 0 0 chr10 8463015 8463164 -131853601 - FRAM SINE Alu -26 150 2 624 266 110 17 chr10 8463168 8463405 -131853360 + MER112 DNA MER1_type 1 259 -1 1197 147 0 26 chr10 8464114 8464304 -131852461 + AluJo SINE Alu 84 268 -44 240 287 50 88 chr10 8464511 8464605 -131852160 + MLT1L LTR MaLR 367 452 -163 1712 181 0 10 chr10 8464605 8464898 -131851867 + AluJo SINE Alu 5 294 -18 240 287 50 88 chr10 8464898 8464984 -131851781 + MLT1L LTR MaLR 452 540 -75 483 173 0 0 chr10 8465009 8465119 -131851646 + CT-rich Low_complexity Low_complexity 2 111 0 1847 126 69 0 chr10 8465119 8465381 -131851384 - AluSx SINE Alu -32 280 1 1969 155 7 3 chr10 8465915 8466225 -131850540 - AluJo SINE Alu -1 311 1 823 174 83 53 chr10 8466456 8466603 -131850162 - MER33 DNA MER1_type -2261 324 163 1832 166 0 4 chr10 8466603 8466903 -131849862 + AluSx SINE Alu 9 307 0 823 174 83 53 chr10 8466903 8467018 -131849747 - MER33 DNA MER1_type -2422 163 53 281 85 34 0 chr10 8467356 8467591 -131849174 + CT-rich Low_complexity Low_complexity 1 180 0 1945 157 3 25 chr10 8467591 8467910 -131848855 - AluSq SINE Alu 0 547 1 213 232 189 63 chr10 8467922 8468017 -131848748 + MIR SINE MIR 74 180 -82 186 233 123 55 chr10 8468045 8468118 -131848647 + L2 LINE L2 3129 3206 -66 909 46 0 0 chr10 8468966 8469074 -131847691 + L1MA1 LINE L1 6195 6302 0 189 0 81 27 chr10 8469122 8469159 -131847606 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 3135 60 34 0 chr10 8469159 8469540 -131847225 - L1PA8 LINE L1 -17 6155 5762 907 142 7 13 chr10 8469547 8469702 -131847063 + L1MA9 LINE L1 6159 6312 0 364 268 121 19 chr10 8470309 8470466 -131846299 - MIR SINE MIR -67 195 23 272 293 24 12 chr10 8470604 8470686 -131846079 + L2 LINE L2 3227 3309 -4 1611 183 23 17 chr10 8470694 8470994 -131845771 + AluJb SINE Alu 11 312 0 217 163 23 0 chr10 8471400 8471443 -131845322 + A-rich Low_complexity Low_complexity 5 48 0 1761 203 7 0 chr10 8471662 8471972 -131844793 + AluJo SINE Alu 1 312 0 2181 124 0 3 chr10 8472223 8472530 -131844235 + AluSq SINE Alu 1 306 -7 285 262 39 29 chr10 8472820 8472923 -131843842 + MIR SINE MIR 73 176 -86 209 270 108 14 chr10 8473021 8473095 -131843670 + MIR SINE MIR 178 258 -4 1627 145 16 4 chr10 8473477 8473732 -131843033 - AluJo SINE Alu -15 297 40 2212 124 0 10 chr10 8474151 8474458 -131842307 - AluSx SINE Alu -8 304 1 357 43 0 0 chr10 8475179 8475226 -131841539 + (CA)n Simple_repeat Simple_repeat 1 47 0 1799 187 0 13 chr10 8477192 8477507 -131839258 - AluJo SINE Alu -1 311 1 353 266 19 19 chr10 8478617 8478778 -131837987 - MIR SINE MIR -63 145 8 220 214 71 18 chr10 8478936 8478992 -131837773 - MIR SINE MIR -96 166 108 2131 139 0 0 chr10 8479247 8479541 -131837224 + AluSx SINE Alu 1 294 -18 868 172 0 0 chr10 8479706 8479834 -131836931 - FLAM_A SINE Alu -5 128 1 1724 179 3 13 chr10 8480973 8481286 -131835479 + AluJo SINE Alu 1 310 -2 1942 173 0 3 chr10 8481320 8481632 -131835133 + AluSx SINE Alu 1 311 -1 534 298 41 1 chr10 8481655 8481824 -131834941 - MIR SINE MIR -31 177 46 230 311 56 0 chr10 8481859 8481949 -131834816 + MIR SINE MIR 168 262 0 23 68 0 0 chr10 8482045 8482089 -131834676 + AT_rich Low_complexity Low_complexity 1 44 0 843 127 8 8 chr10 8482089 8482207 -131834558 - FLAM_C SINE Alu -15 118 1 2247 108 3 0 chr10 8483925 8484230 -131832535 + AluSg1 SINE Alu 1 306 -3 318 328 88 37 chr10 8486641 8487049 -131829716 - L2 LINE L2 -8 3264 2836 268 291 12 0 chr10 8487049 8487135 -131829630 + (CGGGG)n Simple_repeat Simple_repeat 4 90 0 21 36 0 0 chr10 8487485 8487513 -131829252 + AT_rich Low_complexity Low_complexity 1 28 0 342 295 45 0 chr10 8487541 8487653 -131829112 - MIR SINE MIR 0 262 146 1778 170 10 10 chr10 8487694 8487994 -131828771 - AluJo SINE Alu -12 300 1 22 0 0 0 chr10 8489448 8489470 -131827295 + AT_rich Low_complexity Low_complexity 1 22 0 562 223 69 23 chr10 8489701 8489876 -131826889 + MIR SINE MIR 34 216 -46 240 292 167 0 chr10 8490771 8490843 -131825922 + MER5A DNA MER1_type 2 85 -104 1893 143 7 0 chr10 8491286 8491566 -131825199 - AluJo SINE Alu -26 286 5 217 318 16 16 chr10 8492436 8492499 -131824266 - MIR SINE MIR -116 146 84 965 196 4 94 chr10 8492590 8492825 -131823940 - MER20 DNA MER1_type -4 215 2 702 167 25 8 chr10 8492940 8493060 -131823705 + FLAM_A SINE Alu 2 123 -10 345 309 12 0 chr10 8494136 8494298 -131822467 + (TA)n Simple_repeat Simple_repeat 2 165 0 302 313 0 0 chr10 8494306 8494389 -131822376 + L1MC4 LINE L1 6614 6696 -1346 803 143 0 8 chr10 8494389 8494508 -131822257 - FLAM_C SINE Alu -24 119 2 1988 228 49 62 chr10 8494628 8495255 -131821510 - L1ME1 LINE L1 -6 6160 5542 1977 117 46 0 chr10 8495848 8496131 -131820634 - AluSx SINE Alu -15 297 2 188 67 33 0 chr10 8496619 8496649 -131820116 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 915 180 25 0 chr10 8497172 8497333 -131819432 - MER5A DNA MER1_type -24 165 1 260 286 8 92 chr10 8497380 8497436 -131819329 - MIR3 SINE MIR 0 208 166 1193 187 22 40 chr10 8497436 8497661 -131819104 - MER58A DNA MER1_type 0 224 4 260 286 8 92 chr10 8497661 8497723 -131819042 - MIR3 SINE MIR -42 166 100 1191 216 69 79 chr10 8497825 8497838 -131818927 - MLT1F1 LTR MaLR 0 559 547 2378 150 8 35 chr10 8497838 8498239 -131818526 - MLT1B LTR MaLR 0 390 1 1191 216 69 79 chr10 8498239 8498766 -131817999 - MLT1F1 LTR MaLR -12 547 6 717 148 10 0 chr10 8498956 8499057 -131817708 + L1PB4 LINE L1 6039 6140 -16 23 54 0 0 chr10 8499583 8499620 -131817145 + AT_rich Low_complexity Low_complexity 1 37 0 1166 137 103 29 chr10 8499672 8499876 -131816889 + MER20 DNA MER1_type 1 219 0 294 247 132 63 chr10 8500267 8500416 -131816349 - L1ME4a LINE L1 -9 6112 5946 1711 221 152 47 chr10 8500416 8500954 -131815811 + MLT1G1 LTR MaLR 1 595 0 294 247 132 63 chr10 8500954 8500994 -131815771 - L1ME4a LINE L1 -175 5946 5910 290 254 119 51 chr10 8501756 8501874 -131814891 - L2 LINE L2 -1 3312 3187 395 299 160 0 chr10 8502126 8502270 -131814495 + MIR3 SINE MIR 36 202 -6 213 212 53 0 chr10 8502648 8502761 -131814004 + (TA)n Simple_repeat Simple_repeat 1 119 0 255 175 0 0 chr10 8503130 8503187 -131813578 + (TA)n Simple_repeat Simple_repeat 2 58 0 1541 185 58 102 chr10 8503982 8504463 -131812302 + MLT2C2 LTR ERVL 1 460 -4 248 200 31 31 chr10 8504885 8504950 -131811815 + L2 LINE L2 3249 3313 0 490 113 0 72 chr10 8505489 8505683 -131811082 + (TA)n Simple_repeat Simple_repeat 1 180 0 257 208 0 0 chr10 8505685 8505738 -131811027 + GA-rich Low_complexity Low_complexity 1 53 0 1161 68 17 11 chr10 8506403 8506580 -131810185 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 480 208 94 0 chr10 8508480 8508586 -131808179 + MER5A DNA MER1_type 74 189 0 1522 196 0 7 chr10 8508694 8508964 -131807801 - AluJb SINE Alu -44 268 1 700 212 26 36 chr10 8509026 8509219 -131807546 - MLT1J LTR MaLR 0 511 321 875 220 49 52 chr10 8509229 8509677 -131807088 - MLT1D LTR MaLR -6 499 26 679 273 89 25 chr10 8509692 8510018 -131806747 - MLT1J LTR MaLR -164 347 1 1825 158 27 3 chr10 8510225 8510517 -131806248 - AluJo SINE Alu -13 299 1 216 0 0 0 chr10 8510898 8510922 -131805843 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 199 143 29 0 chr10 8511465 8511500 -131805265 - MIR SINE MIR -65 197 162 354 271 69 7 chr10 8512296 8512440 -131804325 - L1ME4a LINE L1 -1 6120 5968 183 271 21 21 chr10 8512618 8512666 -131804099 + L2 LINE L2 3213 3260 -12 396 339 23 28 chr10 8512772 8512949 -131803816 - MIR SINE MIR -74 188 13 4283 127 30 6 chr10 8513433 8514073 -131802692 + L1PA16 LINE L1 5503 6157 -9 300 210 0 0 chr10 8514074 8514155 -131802610 + (TA)n Simple_repeat Simple_repeat 2 82 0 316 292 11 0 chr10 8514155 8514244 -131802521 + L1MC4 LINE L1 6614 6703 -1339 2078 125 7 0 chr10 8514890 8515179 -131801586 + AluSp SINE Alu 14 304 -9 851 263 50 118 chr10 8515683 8516219 -131800546 + L2 LINE L2 2813 3312 -1 21 0 0 0 chr10 8517011 8517032 -131799733 + AT_rich Low_complexity Low_complexity 1 21 0 1819 173 69 0 chr10 8518338 8518673 -131798092 - MER47A DNA MER2_type -1 365 8 2004 125 7 14 chr10 8518896 8519192 -131797573 + AluSx SINE Alu 1 294 -18 310 267 149 37 chr10 8519503 8519664 -131797101 + L2 LINE L2 3122 3300 -13 487 107 82 2 chr10 8519668 8520155 -131796610 + (TA)n Simple_repeat Simple_repeat 1 526 0 34 24 0 0 chr10 8520155 8520196 -131796569 + AT_rich Low_complexity Low_complexity 1 41 0 360 106 93 0 chr10 8520202 8520363 -131796402 + (TA)n Simple_repeat Simple_repeat 1 176 0 37 52 0 0 chr10 8520363 8520421 -131796344 + AT_rich Low_complexity Low_complexity 1 58 0 235 306 294 8 chr10 8522248 8522493 -131794272 + L3 LINE CR1 1138 1452 -125 263 300 130 63 chr10 8522534 8522881 -131793884 - L2 LINE L2 -36 3236 2867 810 179 0 15 chr10 8523273 8523407 -131793358 - AluJb SINE Alu -179 133 2 22 70 0 0 chr10 8523961 8524004 -131792761 + AT_rich Low_complexity Low_complexity 1 43 0 25 65 0 0 chr10 8524048 8524094 -131792671 + AT_rich Low_complexity Low_complexity 1 46 0 1882 141 21 3 chr10 8524714 8524998 -131791767 + AluJb SINE Alu 1 289 -23 840 117 54 7 chr10 8524998 8525719 -131791046 + (TA)n Simple_repeat Simple_repeat 1 754 0 528 141 0 116 chr10 8525855 8525908 -131790857 - MER33 DNA MER1_type -2476 109 76 2162 127 0 0 chr10 8525908 8526208 -131790557 - AluSx SINE Alu -12 300 1 528 141 0 116 chr10 8526208 8526275 -131790490 - MER33 DNA MER1_type -2509 76 3 1191 26 28 26 chr10 8527545 8527787 -131788978 + (TTTC)n Simple_repeat Simple_repeat 2 423 0 1091 173 0 11 chr10 8527791 8527976 -131788789 - AluSq SINE Alu -13 300 118 760 132 7 44 chr10 8528081 8528217 -131788548 - LTR9 LTR ERV1 -481 131 1 383 259 175 21 chr10 8529822 8529965 -131786800 - MIR3 SINE MIR -27 181 17 489 130 13 0 chr10 8530147 8530224 -131786541 + MADE1 DNA Mariner 3 80 0 2203 110 0 0 chr10 8530290 8530581 -131786184 - AluSq SINE Alu -18 295 5 551 319 40 22 chr10 8531170 8531396 -131785369 - MIR SINE MIR 0 262 33 936 216 0 55 chr10 8531453 8531671 -131785094 + MER3 DNA MER1_type 2 207 -2 405 176 28 9 chr10 8531811 8531919 -131784846 + GA-rich Low_complexity Low_complexity 4 113 0 2281 108 7 0 chr10 8532135 8532440 -131784325 + AluSx SINE Alu 1 307 -5 214 356 67 0 chr10 8532641 8532731 -131784034 - MIR3 SINE MIR -24 184 89 304 276 243 17 chr10 8534614 8534795 -131781970 + MIR SINE MIR 4 225 -37 234 91 0 0 chr10 8536126 8536159 -131780606 + (T)n Simple_repeat Simple_repeat 1 33 0 445 274 9 9 chr10 8536558 8536664 -131780101 + L2 LINE L2 3208 3313 0 5777 22 5 2 chr10 8537672 8538308 -131778457 + L1PA4 LINE L1 5516 6153 -2 207 167 0 0 chr10 8538631 8538667 -131778098 + (TTG)n Simple_repeat Simple_repeat 1 36 0 2413 76 0 16 chr10 8539104 8539420 -131777345 + AluSx SINE Alu 1 311 -1 185 250 50 75 chr10 8540026 8540106 -131776659 + MIR SINE MIR 65 142 -66 453 81 0 0 chr10 8542100 8542162 -131774603 + (TCCA)n Simple_repeat Simple_repeat 1 62 0 967 272 25 0 chr10 8543258 8543501 -131773264 - MIR SINE MIR -11 251 3 660 249 83 50 chr10 8543956 8544197 -131772568 - MIR SINE MIR -10 252 4 3373 170 45 5 chr10 8544329 8545006 -131771759 - MER39 LTR ERV1 -3 639 1 27 62 0 0 chr10 8545519 8545567 -131771198 + AT_rich Low_complexity Low_complexity 1 48 0 23 0 0 0 chr10 8545655 8545678 -131771087 + AT_rich Low_complexity Low_complexity 1 23 0 198 293 183 0 chr10 8545738 8545820 -131770945 - MER5C DNA MER1_type 0 324 228 181 156 0 0 chr10 8545833 8545865 -131770900 - MER5C DNA MER1_type -201 123 92 242 307 0 13 chr10 8546460 8546535 -131770230 + L1ME LINE L1 5582 5655 -466 304 269 182 50 chr10 8546965 8547207 -131769558 + LTR33A LTR ERVL 229 502 -21 302 225 12 0 chr10 8547209 8547289 -131769476 + CT-rich Low_complexity Low_complexity 1 81 0 474 198 32 0 chr10 8547326 8547452 -131769313 + CT-rich Low_complexity Low_complexity 2 131 0 1159 238 13 36 chr10 8547802 8548104 -131768661 + MLT1F LTR MaLR 43 337 -205 1864 171 50 26 chr10 8548131 8548510 -131768255 - MER39 LTR ERV1 -1 706 319 555 56 0 0 chr10 8548757 8548828 -131767937 + (TTCC)n Simple_repeat Simple_repeat 4 74 0 360 235 35 0 chr10 8548856 8548941 -131767824 - MER39B LTR ERV1 -311 342 255 225 0 0 0 chr10 8548956 8548981 -131767784 + (TTCC)n Simple_repeat Simple_repeat 4 28 0 186 71 0 0 chr10 8549023 8549051 -131767714 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 691 127 24 0 chr10 8549052 8549178 -131767587 + CT-rich Low_complexity Low_complexity 4 132 0 228 100 0 0 chr10 8549179 8549219 -131767546 + (TCTCTG)n Simple_repeat Simple_repeat 3 42 0 1775 185 7 0 chr10 8549230 8549522 -131767243 - AluJb SINE Alu -16 296 3 1652 132 87 3 chr10 8549523 8549811 -131766954 - MER39 LTR ERV1 -394 313 2 576 214 7 62 chr10 8549811 8549947 -131766818 + MLT1F LTR MaLR 405 532 -35 888 106 159 33 chr10 8550102 8550253 -131766512 - AluSg/x SINE Alu -7 303 134 2443 73 0 0 chr10 8552249 8552551 -131764214 - AluY SINE Alu -9 302 1 245 341 79 5 chr10 8554438 8554620 -131762145 + MIR3 SINE MIR 12 207 -1 1367 173 11 50 chr10 8555545 8555938 -131760827 - AluJo SINE Alu 0 419 38 1578 270 110 33 chr10 8555985 8556601 -131760164 + HAL1 LINE L1 1629 2323 -184 877 172 0 8 chr10 8556601 8556735 -131760030 + FLAM_C SINE Alu 1 133 0 1578 270 110 33 chr10 8556735 8556929 -131759836 + HAL1 LINE L1 2323 2501 -6 298 238 148 10 chr10 8557303 8557404 -131759361 + L2 LINE L2 3199 3313 0 331 362 65 0 chr10 8557471 8557703 -131759062 + L2 LINE L2 2638 2884 -430 372 164 0 0 chr10 8558231 8558298 -131758467 + (CA)n Simple_repeat Simple_repeat 1 67 0 337 260 182 39 chr10 8559402 8559556 -131757209 - MIR SINE MIR -86 176 1 310 321 21 86 chr10 8559625 8559671 -131757094 + L2 LINE L2 3142 3189 -83 2142 130 0 3 chr10 8559671 8559972 -131756793 + AluSx SINE Alu 1 300 -12 310 321 21 86 chr10 8559972 8560065 -131756700 + L2 LINE L2 3189 3272 0 538 257 39 56 chr10 8560933 8561112 -131755653 - MIR3 SINE MIR -32 176 1 28 86 0 0 chr10 8561264 8561334 -131755431 + AT_rich Low_complexity Low_complexity 1 70 0 1993 129 0 4 chr10 8561620 8561900 -131754865 + AluSx SINE Alu 1 279 -33 23 0 0 0 chr10 8561940 8561963 -131754802 + AT_rich Low_complexity Low_complexity 1 23 0 819 252 166 19 chr10 8561965 8562326 -131754439 + MLT1J LTR MaLR 98 511 0 282 56 0 0 chr10 8563470 8563506 -131753259 + (TG)n Simple_repeat Simple_repeat 2 37 0 223 265 0 0 chr10 8565118 8565167 -131751598 + (CA)n Simple_repeat Simple_repeat 2 50 0 1963 139 137 11 chr10 8568226 8568606 -131748159 - MSTA LTR MaLR 0 428 1 1782 153 14 14 chr10 8568950 8569262 -131747503 - AluJo SINE Alu 0 312 1 516 206 28 153 chr10 8569416 8569742 -131747023 - L1M4 LINE L1 -1484 4662 4378 428 267 121 11 chr10 8569777 8570050 -131746715 - L1M4 LINE L1 -2465 3681 3379 3673 32 0 0 chr10 8570059 8570494 -131746271 - L1PA3 LINE L1 -5 6150 5716 243 278 156 18 chr10 8571249 8571363 -131745402 - MIR SINE MIR -41 167 35 2026 133 30 0 chr10 8571670 8571971 -131744794 - AluSx SINE Alu -2 310 1 1254 136 166 2 chr10 8572222 8572650 -131744115 - L1PA13 LINE L1 -11 6152 5658 201 333 100 33 chr10 8572785 8572905 -131743860 + L2 LINE L2 3136 3263 -9 363 44 0 0 chr10 8577126 8577171 -131739594 + (CA)n Simple_repeat Simple_repeat 1 45 0 1772 184 0 16 chr10 8579133 8579449 -131737316 - AluJo SINE Alu 0 312 2 181 338 75 12 chr10 8580926 8581006 -131735759 - MIR SINE MIR -163 99 15 365 243 68 79 chr10 8581043 8581220 -131735545 + MIR SINE MIR 33 207 -55 252 0 0 0 chr10 8582176 8582204 -131734561 + (TG)n Simple_repeat Simple_repeat 2 29 0 78 0 0 0 chr10 8582204 8582282 -131734483 + AT_rich Low_complexity Low_complexity 1 78 0 319 236 47 39 chr10 8582282 8582409 -131734356 - L1M4 LINE L1 -2912 3234 3107 52 0 0 0 chr10 8582418 8582470 -131734295 + AT_rich Low_complexity Low_complexity 1 52 0 260 177 35 35 chr10 8582470 8582583 -131734182 + (TATAA)n Simple_repeat Simple_repeat 1 113 0 198 91 55 18 chr10 8582588 8582643 -131734122 + A-rich Low_complexity Low_complexity 2 58 0 296 300 76 57 chr10 8582767 8582977 -131733788 - L2 LINE L2 -3071 243 30 3801 161 85 5 chr10 8584504 8584623 -131732142 - L1MA10 LINE L1 -39 6295 6187 465 19 0 0 chr10 8584623 8584677 -131732088 + (TTTTA)n Simple_repeat Simple_repeat 2 55 0 3801 161 85 5 chr10 8584677 8585310 -131731455 - L1MA10 LINE L1 -147 6187 5483 1834 117 12 4 chr10 8585360 8585609 -131731156 + AluSc SINE Alu 7 257 -52 1087 248 193 39 chr10 8585713 8586230 -131730535 - L2 LINE L2 -2482 832 236 2167 103 6 13 chr10 8586230 8586542 -131730223 + AluSg SINE Alu 1 310 0 420 37 0 0 chr10 8587481 8587535 -131729230 + (CA)n Simple_repeat Simple_repeat 2 55 0 346 188 21 21 chr10 8588342 8588438 -131728327 + CT-rich Low_complexity Low_complexity 1 96 0 261 139 0 0 chr10 8588431 8588474 -131728291 + (TCTCC)n Simple_repeat Simple_repeat 1 43 0 * 391 273 327 0 chr10 8588606 8588771 -131727994 - MIR SINE MIR -26 236 18 319 282 129 29 chr10 8589021 8589191 -131727574 - MIR SINE MIR -45 217 31 1368 143 0 66 chr10 8589605 8589849 -131726916 + AluJo SINE Alu 40 267 -45 217 216 0 0 chr10 8589998 8590035 -131726730 + polypyrimidine Low_complexity Low_complexity 3 39 0 377 182 20 27 chr10 8590042 8590190 -131726575 + (TA)n Simple_repeat Simple_repeat 2 148 0 25 0 0 0 chr10 8590356 8590381 -131726384 + AT_rich Low_complexity Low_complexity 1 25 0 1283 141 13 0 chr10 8590850 8591077 -131725688 - L1MB1 LINE L1 -34 6155 5926 473 145 0 0 chr10 8591078 8591161 -131725604 + L1M3 LINE L1 5570 5652 -516 2592 43 0 0 chr10 8591549 8591852 -131724913 + AluY SINE Alu 2 304 -7 575 259 25 37 chr10 8592372 8592534 -131724231 + MIR3 SINE MIR 46 205 -3 215 143 0 18 chr10 8592758 8592814 -131723951 + (TA)n Simple_repeat Simple_repeat 2 56 0 2249 98 3 0 chr10 8592814 8593099 -131723666 - AluSp SINE Alu -27 286 1 206 275 110 0 chr10 8593872 8593963 -131722802 + MIR SINE MIR 118 218 -44 868 312 83 67 chr10 8594094 8594838 -131721927 + L2 LINE L2 1174 1929 -1385 710 338 115 16 chr10 8594855 8594982 -131721783 + L2 LINE L2 2304 2417 -897 2415 149 14 41 chr10 8594982 8595418 -131721347 - MSTB LTR MaLR -2 424 1 710 338 115 16 chr10 8595418 8595716 -131721049 + L2 LINE L2 2417 2771 -543 375 329 126 11 chr10 8596186 8596463 -131720302 + MLT1J2 LTR MaLR 64 372 -78 532 250 0 8 chr10 8596530 8596654 -131720111 + MER58B DNA MER1_type 219 341 0 242 396 139 0 chr10 8596788 8596932 -131719833 - L2 LINE L2 -5 3267 3104 1200 254 86 17 chr10 8597004 8597410 -131719355 - LTR16A LTR ERVL 0 450 17 214 342 5 86 chr10 8597420 8597607 -131719158 - L2 LINE L2 -210 3062 2891 1014 128 41 0 chr10 8598302 8598474 -131718291 - THE1C LTR MaLR 0 375 197 254 210 16 0 chr10 8598540 8598620 -131718145 + (TATTG)n Simple_repeat Simple_repeat 1 81 0 2175 128 3 13 chr10 8599135 8599447 -131717318 - AluSx SINE Alu -3 309 1 411 303 96 28 chr10 8599541 8599719 -131717046 - L3b LINE CR1 -118 1465 1276 4683 50 0 3 chr10 8601243 8601823 -131714942 - L1PA5 LINE L1 -1 6153 5576 203 255 43 128 chr10 8601948 8602089 -131714676 - L2 LINE L2 -217 3055 2927 729 141 62 23 chr10 8602338 8602466 -131714299 + FLAM_C SINE Alu 1 133 0 21 0 0 0 chr10 8604348 8604369 -131712396 + AT_rich Low_complexity Low_complexity 1 21 0 2487 61 0 0 chr10 8604748 8605041 -131711724 + AluY SINE Alu 3 295 -16 2422 97 0 0 chr10 8605333 8605644 -131711121 + AluSx SINE Alu 1 311 -1 646 322 19 14 chr10 8608446 8608657 -131708108 + MIR SINE MIR 3 214 -48 1577 226 7 0 chr10 8608729 8609079 -131707686 - AluJo SINE Alu 0 352 1 206 231 115 26 chr10 8609082 8609160 -131707605 + L2 LINE L2 3188 3272 0 864 128 0 14 chr10 8610124 8610312 -131706453 + (TTCC)n Simple_repeat Simple_repeat 1 185 0 200 108 0 27 chr10 8610396 8610433 -131706332 + (TCCC)n Simple_repeat Simple_repeat 4 39 0 186 229 16 66 chr10 8610495 8610556 -131706209 - L2 LINE L2 0 3313 3256 230 236 0 18 chr10 8611481 8611536 -131705229 + (TG)n Simple_repeat Simple_repeat 1 54 0 2517 153 9 24 chr10 8612686 8613111 -131703654 + MSTA LTR MaLR 1 419 -9 339 117 0 7 chr10 8613213 8613464 -131703301 + AluSg1 SINE Alu 1 325 0 566 49 12 0 chr10 8614739 8614821 -131701944 + (CA)n Simple_repeat Simple_repeat 2 84 0 684 206 55 7 chr10 8615801 8615947 -131700818 - MER105 DNA DNA -1 203 51 879 15 2 92 chr10 8616338 8616817 -131699948 + (TA)n Simple_repeat Simple_repeat 1 436 0 235 61 61 51 chr10 8616802 8616900 -131699865 + (CATAT)n Simple_repeat Simple_repeat 2 100 0 * 1787 138 35 21 chr10 8619925 8620214 -131696551 + AluSx SINE Alu 1 293 -19 218 225 0 0 chr10 8620502 8620542 -131696223 + MIR SINE MIR 40 79 -129 267 299 63 67 chr10 8620720 8620974 -131695791 - L2 LINE L2 -341 2973 2721 566 135 101 0 chr10 8621561 8621682 -131695083 + AluJb SINE Alu 187 316 0 287 243 92 25 chr10 8621780 8621902 -131694863 - MIR SINE MIR -63 145 38 430 267 35 26 chr10 8622427 8622543 -131694222 + MIR SINE MIR 3 119 -143 428 282 18 9 chr10 8622598 8622708 -131694057 - L2 LINE L2 -10 3303 3193 994 181 5 29 chr10 8622869 8623073 -131693692 + Charlie5 DNA MER1_type 2 200 -2412 * 1085 193 59 15 chr10 8623059 8623329 -131693436 + Charlie5 DNA MER1_type 2343 2624 0 309 242 68 37 chr10 8624486 8624599 -131692166 - MIR SINE MIR -81 127 11 1380 179 33 22 chr10 8624673 8624997 -131691768 + AluJo SINE Alu 34 312 0 201 265 137 49 chr10 8626291 8626393 -131690372 + L2 LINE L2 3162 3272 0 1843 166 31 0 chr10 8627371 8627661 -131689104 + AluJb SINE Alu 5 303 -9 236 270 113 26 chr10 8628765 8628880 -131687885 + L2 LINE L2 3182 3306 -7 850 248 41 37 chr10 8630644 8630886 -131685879 + MIR SINE MIR 1 243 -19 277 223 136 10 chr10 8631006 8631109 -131685656 - MER103 DNA DNA -47 119 4 247 284 55 37 chr10 8632231 8632261 -131684504 + MIR3 SINE MIR 71 99 -109 1961 145 0 31 chr10 8632261 8632579 -131684186 - AluJo SINE Alu -4 308 1 247 284 55 37 chr10 8632579 8632657 -131684108 + MIR3 SINE MIR 99 181 -27 215 197 0 45 chr10 8633680 8633746 -131683019 + (TGAA)n Simple_repeat Simple_repeat 1 63 0 1737 158 7 34 chr10 8633867 8634165 -131682600 - AluJo SINE Alu -22 290 1 2128 113 13 10 chr10 8634656 8634965 -131681800 + AluSx SINE Alu 1 310 -2 819 153 8 0 chr10 8635043 8635174 -131681591 - FLAM_C SINE Alu 0 143 12 44 20 0 0 chr10 8635257 8635308 -131681457 + AT_rich Low_complexity Low_complexity 1 51 0 251 277 98 103 chr10 8635320 8635751 -131681014 - L2 LINE L2 -6 3307 2875 3925 142 89 8 chr10 8635751 8636405 -131680360 - MER39 LTR ERV1 0 707 1 251 277 98 103 chr10 8636405 8636556 -131680209 - L2 LINE L2 -438 2875 2725 1872 153 24 0 chr10 8636556 8636843 -131679922 + AluJb SINE Alu 1 294 -18 251 277 98 103 chr10 8636843 8637004 -131679761 - L2 LINE L2 -588 2725 2553 800 183 0 0 chr10 8637216 8637336 -131679429 - FLAM_C SINE Alu -22 121 2 497 302 108 29 chr10 8638020 8638364 -131678401 + MLT1J LTR MaLR 106 476 -35 1610 185 3 64 chr10 8638597 8638927 -131677838 + AluJb SINE Alu 1 310 -2 181 308 0 0 chr10 8639205 8639257 -131677508 - L2 LINE L2 0 3313 3262 846 165 0 0 chr10 8639451 8639584 -131677181 - FLAM_C SINE Alu 0 133 1 1846 129 20 0 chr10 8639651 8639944 -131676821 + AluSx SINE Alu 24 321 0 5031 94 12 0 chr10 8640260 8640912 -131675853 - L1PA10 LINE L1 -4 6164 5505 210 368 128 0 chr10 8641261 8641378 -131675387 - L2 LINE L2 -4 3268 3137 1654 171 50 4 chr10 8642214 8642494 -131674271 + AluJb SINE Alu 1 293 -19 632 241 97 5 chr10 8643119 8643314 -131673451 + L2 LINE L2 2132 2344 -970 186 43 0 0 chr10 8643315 8643338 -131673427 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 826 197 58 21 chr10 8643342 8643530 -131673235 - AluJo SINE Alu -31 281 87 180 0 0 0 chr10 8643548 8643568 -131673197 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1802 164 4 0 chr10 8643581 8643856 -131672909 - AluSx SINE Alu -36 276 1 1987 130 10 3 chr10 8644333 8644626 -131672139 - AluSx SINE Alu -17 295 1 707 304 69 42 chr10 8644626 8645128 -131671637 - L2 LINE L2 -21 3292 2706 1040 93 2 7 chr10 8645128 8645274 -131671491 - L1P LINE L1 -1500 4646 4498 2134 89 4 0 chr10 8645274 8645544 -131671221 + L1PA7 LINE L1 5884 6154 0 564 279 105 39 chr10 8645565 8645651 -131671114 - L2 LINE L2 -613 2701 2622 628 239 123 7 chr10 8645651 8645806 -131670959 + MER96 DNA MER1_type 3 175 0 564 279 105 39 chr10 8645806 8646128 -131670637 - L2 LINE L2 -692 2622 2266 240 343 52 0 chr10 8646303 8646437 -131670328 + L2 LINE L2 2890 3030 -283 1249 104 5 40 chr10 8646446 8646647 -131670118 - L1MA5A LINE L1 0 6297 6104 1148 145 0 2 chr10 8646650 8646891 -131669874 - AluJb SINE Alu -15 297 16 1665 139 20 10 chr10 8646907 8647201 -131669564 - L1MA5A LINE L1 -187 6110 5814 383 322 82 19 chr10 8647238 8647446 -131669319 + L2 LINE L2 3093 3313 0 2664 45 0 3 chr10 8647599 8647911 -131668854 - AluY SINE Alu 0 311 1 915 68 0 68 chr10 8647911 8648035 -131668730 - L1PA7 LINE L1 -7 6147 6031 1892 128 36 4 chr10 8648036 8648317 -131668448 - AluSx SINE Alu -22 290 1 558 167 0 0 chr10 8648798 8648882 -131667883 + AluJb SINE Alu 137 220 -92 2917 119 2 36 chr10 8648882 8649137 -131667628 + L1PB2 LINE L1 5721 5956 -195 2180 103 7 0 chr10 8649137 8649427 -131667338 + AluSq SINE Alu 1 292 -21 2917 119 2 36 chr10 8649427 8649616 -131667149 + L1PB2 LINE L1 5956 6150 -1 350 298 93 4 chr10 8649677 8649838 -131666927 + MIR SINE MIR 16 188 -74 679 303 85 43 chr10 8650017 8650560 -131666205 - MLT1L LTR MaLR -9 606 1 2220 112 0 20 chr10 8651050 8651355 -131665410 - AluSg SINE Alu -11 299 1 1936 166 3 0 chr10 8651386 8651688 -131665077 - AluSx SINE Alu -9 303 1 22 35 0 0 chr10 8651826 8651855 -131664910 + AT_rich Low_complexity Low_complexity 1 29 0 454 318 28 74 chr10 8652208 8652491 -131664274 + L3 LINE CR1 1307 1576 -1 357 75 0 0 chr10 8653412 8653465 -131663300 + (TA)n Simple_repeat Simple_repeat 2 54 0 2272 100 0 3 chr10 8653529 8653829 -131662936 + AluSg SINE Alu 2 300 -10 261 0 0 0 chr10 8654200 8654229 -131662536 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 244 145 43 58 chr10 8654357 8654426 -131662339 - L1P3 LINE L1 -5949 512 445 791 5 0 97 chr10 8655740 8655935 -131660830 + (TA)n Simple_repeat Simple_repeat 2 177 0 243 372 85 16 chr10 8655999 8656128 -131660637 - L2 LINE L2 -12 3260 3123 558 348 77 23 chr10 8656178 8656696 -131660069 - L2 LINE L2 -556 2758 2213 277 324 56 9 chr10 8656854 8656962 -131659803 + L2 LINE L2 3199 3311 -2 314 293 136 16 chr10 8656992 8657234 -131659531 - L2 LINE L2 -1292 2022 1752 185 250 0 94 chr10 8657443 8657507 -131659258 - L3 LINE CR1 -219 1358 1301 1609 135 27 30 chr10 8657813 8658110 -131658655 + AluJb SINE Alu 1 296 -16 312 27 0 0 chr10 8658728 8658765 -131658000 + (TG)n Simple_repeat Simple_repeat 2 38 0 228 35 0 0 chr10 8658764 8658793 -131657972 + (TA)n Simple_repeat Simple_repeat 2 30 0 * 296 306 42 119 chr10 8659431 8659833 -131656932 - L2 LINE L2 -4 3268 2898 2872 7 0 0 chr10 8659849 8660157 -131656608 - AluY SINE Alu -3 308 1 6727 94 10 3 chr10 8660165 8661400 -131655365 + L1PA12 LINE L1 4921 6161 -7 2573 52 7 0 chr10 8661801 8662106 -131654659 + AluY SINE Alu 1 307 -4 862 131 0 8 chr10 8662354 8662484 -131654281 + FLAM_C SINE Alu 1 129 -4 314 230 103 40 chr10 8662970 8663096 -131653669 + MIR SINE MIR 123 256 -6 1665 178 69 94 chr10 8663584 8663661 -131653104 - MLT1C LTR MaLR 0 467 390 1679 143 31 0 chr10 8663661 8663790 -131652975 - AluSx SINE Alu -46 266 142 423 0 0 0 chr10 8663790 8663837 -131652928 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1679 143 31 0 chr10 8663837 8663965 -131652800 - AluSx SINE Alu -170 142 1 1665 178 69 94 chr10 8663965 8664366 -131652399 - MLT1C LTR MaLR -77 390 1 314 246 25 49 chr10 8664600 8664722 -131652043 - L2 LINE L2 -15 3298 3180 595 128 0 86 chr10 8664764 8664793 -131651972 + MLT1B LTR MaLR 81 111 -279 1872 156 0 47 chr10 8664793 8665114 -131651651 + AluSx SINE Alu 1 306 -6 595 128 0 86 chr10 8665114 8665201 -131651564 + MLT1B LTR MaLR 111 187 -203 685 69 11 0 chr10 8665209 8665296 -131651469 + AluY SINE Alu 205 292 -19 992 188 15 10 chr10 8665313 8665510 -131651255 + MLT1B LTR MaLR 188 385 -5 372 216 98 10 chr10 8665514 8665616 -131651149 + MER58B DNA MER1_type 186 296 -45 2124 137 10 0 chr10 8665708 8666014 -131650751 - AluY SINE Alu -2 309 1 420 304 96 26 chr10 8666102 8666332 -131650433 - MIR SINE MIR -14 248 3 3683 153 13 38 chr10 8666408 8667088 -131649677 - L1MA9 LINE L1 -146 6166 5504 311 287 128 0 chr10 8667164 8667258 -131649507 - L2 LINE L2 -25 3288 3183 31 0 0 0 chr10 8667641 8667672 -131649093 + AT_rich Low_complexity Low_complexity 1 31 0 1997 116 13 16 chr10 8667687 8667997 -131648768 - L1PA14 LINE L1 -17 6144 5836 951 162 0 0 chr10 8668711 8668853 -131647912 - FRAM SINE Alu -15 161 20 30 59 0 0 chr10 8670273 8670324 -131646441 + AT_rich Low_complexity Low_complexity 1 51 0 219 69 0 0 chr10 8670330 8670359 -131646406 + (TCTA)n Simple_repeat Simple_repeat 2 30 0 1940 139 0 17 chr10 8670359 8670647 -131646118 - AluSx SINE Alu -23 289 7 432 0 0 0 chr10 8672376 8672424 -131644341 + (TAGA)n Simple_repeat Simple_repeat 3 50 0 200 83 0 28 chr10 8672424 8672460 -131644305 + (TA)n Simple_repeat Simple_repeat 2 36 0 21 36 0 0 chr10 8672831 8672859 -131643906 + AT_rich Low_complexity Low_complexity 1 28 0 230 296 12 12 chr10 8672917 8672998 -131643767 - MIR SINE MIR -71 137 57 207 0 0 0 chr10 8673001 8673024 -131643741 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1914 156 0 0 chr10 8673576 8673851 -131642914 + AluSx SINE Alu 1 275 -37 244 122 61 0 chr10 8674364 8674446 -131642319 + (TA)n Simple_repeat Simple_repeat 1 87 0 434 107 71 6 chr10 8674460 8674629 -131642136 + (TA)n Simple_repeat Simple_repeat 1 180 0 208 152 57 13 chr10 8674641 8674799 -131641966 + (TA)n Simple_repeat Simple_repeat 2 166 0 247 279 85 0 chr10 8674847 8674976 -131641789 + L1MC4 LINE L1 7738 7877 -165 220 296 0 0 chr10 8674983 8675037 -131641728 + (TATATG)n Simple_repeat Simple_repeat 2 55 0 863 119 0 0 chr10 8675257 8675399 -131641366 - FLAM_C SINE Alu 0 142 1 189 325 58 50 chr10 8675417 8675537 -131641228 - MIR SINE MIR -139 123 3 1888 149 141 8 chr10 8676619 8676995 -131639770 - MSTA LTR MaLR 0 428 3 186 279 108 31 chr10 8677137 8677266 -131639499 - L2 LINE L2 0 3313 3175 1147 279 142 33 chr10 8677340 8677490 -131639275 - L2 LINE L2 -8 3305 3173 2060 137 7 0 chr10 8677490 8677782 -131638983 + AluSx SINE Alu 8 301 -11 1147 279 142 33 chr10 8677782 8678528 -131638237 - L2 LINE L2 -140 3173 2322 1284 169 0 14 chr10 8678532 8678745 -131638020 + AluJo SINE Alu 1 210 -102 221 0 35 0 chr10 8678764 8678793 -131637972 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1992 265 199 42 chr10 8678816 8679479 -131637286 - L2 LINE L2 -988 2326 1768 2165 118 0 13 chr10 8679479 8679783 -131636982 - AluSx SINE Alu -12 300 1 1992 265 199 42 chr10 8679783 8680320 -131636445 - L2 LINE L2 -1546 1768 1316 2316 81 24 0 chr10 8680320 8680616 -131636149 - AluSp SINE Alu -10 303 1 1785 181 0 16 chr10 8680616 8680930 -131635835 - AluJo SINE Alu -3 309 1 1992 265 199 42 chr10 8680930 8681046 -131635719 - L2 LINE L2 -1997 1317 802 315 0 0 0 chr10 8683519 8683554 -131633211 + (CA)n Simple_repeat Simple_repeat 2 36 0 2335 101 0 3 chr10 8684756 8684778 -131631987 - AluY SINE Alu -4 307 286 210 105 0 0 chr10 8684778 8684816 -131631949 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 2335 101 0 3 chr10 8684816 8685101 -131631664 - AluY SINE Alu -25 286 1 1392 187 90 14 chr10 8685106 8685384 -131631381 - AluJb SINE Alu -13 299 1 204 40 0 0 chr10 8685685 8685710 -131631055 + (A)n Simple_repeat Simple_repeat 1 25 0 347 122 0 0 chr10 8685922 8685971 -131630794 - L1PA13 LINE L1 -293 5870 5822 345 343 88 15 chr10 8686878 8687082 -131629683 - MIR SINE MIR -32 230 12 2004 138 0 0 chr10 8687350 8687625 -131629140 + AluSx SINE Alu 1 275 -37 207 0 0 0 chr10 8687630 8687653 -131629112 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 805 171 0 0 chr10 8688173 8688296 -131628469 + FLAM_C SINE Alu 1 123 -20 227 227 39 16 chr10 8688936 8689064 -131627701 + (TA)n Simple_repeat Simple_repeat 2 132 0 1748 173 146 3 chr10 8689477 8689846 -131626919 + MSTB LTR MaLR 1 422 -4 375 213 71 39 chr10 8689880 8690007 -131626758 - MIR SINE MIR -120 142 12 2321 114 0 0 chr10 8691038 8691346 -131625419 - AluSg SINE Alu -2 308 1 329 342 19 26 chr10 8691566 8691721 -131625044 + MIR3 SINE MIR 9 162 -46 1506 172 67 0 chr10 8693505 8693790 -131622975 - AluJo SINE Alu -8 304 1 354 98 0 0 chr10 8696289 8696340 -131620425 + (TTCC)n Simple_repeat Simple_repeat 2 52 0 1475 187 35 4 chr10 8696361 8696618 -131620147 - AluJo SINE Alu -47 265 1 240 122 0 0 chr10 8696653 8696694 -131620071 + (A)n Simple_repeat Simple_repeat 1 41 0 604 269 91 10 chr10 8697468 8697676 -131619089 + MIR SINE MIR 6 230 -32 788 156 57 0 chr10 8697797 8697938 -131618827 - FRAM SINE Alu 0 40 1 579 115 0 0 chr10 8697938 8698014 -131618751 - AluJ/FLAM SINE Alu -234 78 3 2610 59 0 0 chr10 8699208 8699515 -131617250 - AluY SINE Alu -4 307 1 252 59 0 0 chr10 8699710 8699744 -131617021 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 1966 167 0 3 chr10 8700686 8700997 -131615768 + AluSx SINE Alu 2 311 -1 1118 150 12 0 chr10 8700997 8701157 -131615608 + AluJb SINE Alu 135 296 -16 469 274 86 16 chr10 8701778 8701964 -131614801 - MIR SINE MIR -54 208 10 640 89 50 0 chr10 8703152 8703253 -131613512 + L1PA3 LINE L1 5909 6014 -141 1630 194 36 72 chr10 8703695 8703727 -131613038 - MLT2C1 LTR ERVL -8 389 357 181 57 57 0 chr10 8703727 8703762 -131613003 + (TG)n Simple_repeat Simple_repeat 2 38 0 1630 194 36 72 chr10 8703762 8703794 -131612971 - MLT2C1 LTR ERVL -40 357 325 2013 117 47 7 chr10 8703794 8704092 -131612673 + AluSg SINE Alu 1 310 0 1630 194 36 72 chr10 8704092 8704417 -131612348 - MLT2C1 LTR ERVL -72 325 13 216 167 37 19 chr10 8706146 8706200 -131610565 + CT-rich Low_complexity Low_complexity 3 57 0 1619 182 7 39 chr10 8706596 8706903 -131609862 - AluJb SINE Alu -15 297 1 260 273 79 36 chr10 8709038 8709177 -131607588 + MIR SINE MIR 118 262 0 2222 121 3 3 chr10 8709524 8709831 -131606934 - AluSx SINE Alu -5 307 1 311 404 31 6 chr10 8710312 8710473 -131606292 + L2 LINE L2 3107 3271 -1 21 36 0 0 chr10 8712631 8712659 -131604106 + AT_rich Low_complexity Low_complexity 1 28 0 191 236 125 14 chr10 8713651 8713723 -131603042 + MIR SINE MIR 84 164 -44 191 289 19 0 chr10 8713927 8713979 -131602786 - L2 LINE L2 -2 3270 3218 214 353 106 0 chr10 8714101 8714186 -131602579 - L2 LINE L2 -40 3232 3139 241 252 160 8 chr10 8714226 8714345 -131602420 + L2 LINE L2 1181 1317 -1997 2165 102 10 0 chr10 8714346 8714641 -131602124 - AluSc SINE Alu -10 299 2 2202 129 11 33 chr10 8715123 8715487 -131601278 + L1PA14 LINE L1 5797 6152 -9 322 263 188 15 chr10 8715919 8716052 -131600713 + MER5B DNA MER1_type 21 176 -2 407 278 15 60 chr10 8716065 8716198 -131600567 - MER5B DNA MER1_type 0 178 52 781 286 45 11 chr10 8716392 8716679 -131600086 + AluJo SINE Alu 1 297 -5 840 144 0 0 chr10 8717019 8717137 -131599628 + FLAM_C SINE Alu 1 118 -25 22 36 0 55 chr10 8717143 8717163 -131599602 + AT_rich Low_complexity Low_complexity 1 21 -31 3830 95 10 0 chr10 8717163 8717657 -131599108 + L1PA10 LINE L1 5665 6163 -5 22 36 0 55 chr10 8717657 8717691 -131599074 + AT_rich Low_complexity Low_complexity 21 52 0 2234 113 10 3 chr10 8718679 8718989 -131597776 - AluSx SINE Alu 0 312 1 331 336 195 34 chr10 8719237 8719460 -131597305 + L3 LINE CR1 1099 1285 -292 1742 161 27 7 chr10 8719460 8719752 -131597013 + AluJo SINE Alu 1 298 -14 331 336 195 34 chr10 8719752 8719939 -131596826 + L3 LINE CR1 1285 1575 -2 516 106 47 35 chr10 8720514 8720599 -131596166 + FRAM SINE Alu 30 115 -61 484 66 11 66 chr10 8720933 8721024 -131595741 - L1PA13 LINE L1 0 6163 6078 1530 57 38 5 chr10 8721030 8721239 -131595526 - L1PA13 LINE L1 -44 6119 5904 2291 85 0 3 chr10 8721243 8721538 -131595227 - AluSx SINE Alu -18 294 1 216 0 0 0 chr10 8721606 8721630 -131595135 + (A)n Simple_repeat Simple_repeat 1 24 0 211 232 101 29 chr10 8722066 8722135 -131594630 + MIR SINE MIR 117 190 -72 1693 160 3 10 chr10 8722208 8722501 -131594264 - AluJo SINE Alu -13 299 9 198 0 0 0 chr10 8722542 8722564 -131594201 + (T)n Simple_repeat Simple_repeat 1 22 0 849 92 0 0 chr10 8722651 8722771 -131593994 + (TTAGGG)n Simple_repeat Simple_repeat 6 125 0 1297 68 6 28 chr10 8723056 8723232 -131593533 - L1PA4 LINE L1 -1 6154 5983 1924 133 31 3 chr10 8723255 8723549 -131593216 - AluSx SINE Alu -10 302 1 268 343 84 24 chr10 8723701 8723867 -131592898 - MIR SINE MIR -2 260 85 220 351 82 62 chr10 8723895 8724200 -131592565 - L2 LINE L2 -11 3261 2951 528 136 0 0 chr10 8725487 8725575 -131591190 + (GGAA)n Simple_repeat Simple_repeat 1 88 0 252 178 76 119 chr10 8725636 8725754 -131591011 - MER103 DNA DNA -46 120 8 1704 153 7 27 chr10 8725905 8726199 -131590566 + AluJo SINE Alu 5 292 -20 748 294 5 23 chr10 8726207 8726425 -131590340 + MIR SINE MIR 28 241 -21 305 371 59 27 chr10 8726498 8726719 -131590046 - MIR SINE MIR -3 259 32 217 231 79 4 chr10 8726770 8726841 -131589924 - MIR SINE MIR -57 151 77 23 54 0 0 chr10 8727224 8727261 -131589504 + AT_rich Low_complexity Low_complexity 1 37 0 2054 96 64 0 chr10 8728834 8729116 -131587649 + AluSq SINE Alu 1 300 -13 243 88 0 0 chr10 8729483 8729517 -131587248 + (A)n Simple_repeat Simple_repeat 1 34 0 797 262 91 92 chr10 8729964 8730086 -131586679 - L2 LINE L2 -165 3148 3027 2266 92 3 10 chr10 8730086 8730391 -131586374 + AluSp SINE Alu 1 303 -10 797 262 91 92 chr10 8730391 8730925 -131585840 - L2 LINE L2 -286 3027 2502 1713 182 129 29 chr10 8730926 8730966 -131585799 - MER47B DNA MER2_type -1905 418 383 2738 131 13 0 chr10 8730966 8731364 -131585401 + MER57A LTR ERV1 1 403 0 1713 182 129 29 chr10 8731364 8731703 -131585062 - MER47B DNA MER2_type -1940 383 1 265 197 0 16 chr10 8731741 8731802 -131584963 + L1MA4 LINE L1 6230 6289 -11 201 108 0 0 chr10 8731810 8731821 -131584944 + (TTAA)n Simple_repeat Simple_repeat 3 13 -26 1861 161 0 20 chr10 8731821 8732125 -131584640 - AluJb SINE Alu -14 298 1 201 108 0 0 chr10 8732125 8732136 -131584629 + (TTAA)n Simple_repeat Simple_repeat 13 23 -16 2423 62 3 0 chr10 8732136 8732428 -131584337 - AluY SINE Alu -13 298 6 201 108 0 0 chr10 8732428 8732441 -131584324 + (TTAA)n Simple_repeat Simple_repeat 22 39 0 1622 232 139 24 chr10 8732451 8732985 -131583780 - L2 LINE L2 -842 2472 1878 987 201 7 97 chr10 8733022 8733301 -131583464 - L1MB8 LINE L1 0 6178 5925 2509 160 17 0 chr10 8733302 8733720 -131583045 - L1MA6 LINE L1 -237 6063 5639 372 285 16 24 chr10 8733720 8733843 -131582922 - L2 LINE L2 -1431 1883 1762 267 103 0 0 chr10 8734286 8734325 -131582440 + (TCCC)n Simple_repeat Simple_repeat 2 40 0 2059 141 7 0 chr10 8734346 8734650 -131582115 - AluSq SINE Alu -7 306 1 1833 154 3 7 chr10 8734971 8735284 -131581481 + AluSx SINE Alu 1 312 0 551 281 7 0 chr10 8735477 8735630 -131581135 + L1M4 LINE L1 5070 5223 -923 253 75 38 19 chr10 8736076 8736129 -131580636 + A-rich Low_complexity Low_complexity 2 55 0 2173 78 18 4 chr10 8736168 8736478 -131580287 + AluSq SINE Alu 2 315 0 248 259 42 105 chr10 8737197 8737340 -131579425 - L1ME1 LINE L1 -35 6131 5998 2158 235 74 10 chr10 8737347 8738066 -131578699 + L1ME1 LINE L1 5119 5885 -281 532 163 41 0 chr10 8738212 8738310 -131578455 - MLT1G LTR MaLR 0 590 489 249 108 0 0 chr10 8738374 8738411 -131578354 + (TCCCC)n Simple_repeat Simple_repeat 2 38 0 1421 193 0 53 chr10 8738411 8738712 -131578053 - AluJo SINE Alu -25 287 3 1238 268 66 70 chr10 8739175 8739750 -131577015 - MLT1G LTR MaLR -11 579 7 222 364 13 0 chr10 8739793 8739870 -131576895 + L2 LINE L2 2230 2307 -1007 36 77 0 0 chr10 8740349 8740427 -131576338 + AT_rich Low_complexity Low_complexity 1 78 0 856 157 8 0 chr10 8740444 8740578 -131576187 - AluJo SINE Alu -177 135 1 181 284 47 88 chr10 8740648 8740796 -131575969 + L2 LINE L2 2344 2485 -829 458 338 33 14 chr10 8740933 8741143 -131575622 + MIR SINE MIR 48 261 -1 2683 108 19 11 chr10 8742139 8742511 -131574254 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr10 8742978 8742999 -131573766 + AT_rich Low_complexity Low_complexity 1 21 0 2689 29 0 16 chr10 8743591 8743906 -131572859 - AluY SINE Alu -1 310 1 907 176 152 10 chr10 8744371 8744575 -131572190 + ORSL DNA AcHobo 19 251 -24 2198 123 0 7 chr10 8744750 8745097 -131571668 - AluSg SINE Alu 0 345 1 1414 84 0 1 chr10 8745302 8745319 -131571446 + L1PA8 LINE L1 5792 5808 -364 1339 76 32 32 chr10 8745319 8745504 -131571261 - L1PA8 LINE L1 -4 6168 5984 1414 84 0 1 chr10 8745504 8745682 -131571083 + L1PA8 LINE L1 5808 5985 -187 1022 185 0 6 chr10 8746368 8746541 -131570224 - AluJo SINE Alu -130 182 11 2264 89 0 3 chr10 8746718 8747011 -131569754 - AluSc SINE Alu -17 292 1 1914 136 43 13 chr10 8747296 8747597 -131569168 - AluSx SINE Alu -2 310 1 315 339 26 52 chr10 8747654 8747769 -131568996 + MIR SINE MIR 34 145 -63 29 28 0 0 chr10 8748210 8748246 -131568519 + AT_rich Low_complexity Low_complexity 1 36 0 201 239 22 0 chr10 8748264 8748310 -131568455 - MIR SINE MIR -10 252 206 444 340 42 37 chr10 8748518 8748862 -131567903 - L1MC/D LINE L1 -571 5591 5268 823 171 0 0 chr10 8748898 8749015 -131567750 + FLAM_C SINE Alu 2 118 -25 387 0 0 0 chr10 8749018 8749061 -131567704 + (TTA)n Simple_repeat Simple_repeat 2 44 0 600 262 131 9 chr10 8749590 8749819 -131566946 - L1ME LINE L1 -335 5786 5530 433 218 171 47 chr10 8750214 8750384 -131566381 + MIR SINE MIR 42 232 -30 230 252 107 38 chr10 8750465 8750596 -131566169 + L1ME4a LINE L1 5965 6104 -17 316 297 86 40 chr10 8750629 8751026 -131565739 + L1ME4a LINE L1 5682 6096 -25 1901 143 0 7 chr10 8751075 8751355 -131565410 + AluSx SINE Alu 16 293 -19 2400 124 19 8 chr10 8752088 8752451 -131564314 + L1MA1 LINE L1 5936 6302 0 1663 188 0 7 chr10 8752468 8752793 -131563972 + AluJb SINE Alu 1 323 0 263 323 21 4 chr10 8752982 8753111 -131563654 + MIR SINE MIR 14 147 -61 186 143 0 0 chr10 8756767 8756802 -131559963 + (TTTTC)n Simple_repeat Simple_repeat 2 36 0 3289 168 42 5 chr10 8757049 8757615 -131559150 + L1PA16 LINE L1 5576 6162 -4 323 287 130 0 chr10 8759953 8760061 -131556704 + L2 LINE L2 3192 3313 0 2222 107 0 3 chr10 8761017 8761308 -131555457 - AluSc SINE Alu -19 290 1 2531 151 9 24 chr10 8761411 8761836 -131554929 - MSTA LTR MaLR -9 419 1 197 294 20 0 chr10 8763824 8763875 -131552890 + MIR SINE MIR 93 144 -64 558 263 22 62 chr10 8763889 8764068 -131552697 - MER5B DNA MER1_type -6 172 1 603 248 0 13 chr10 8765319 8765472 -131551293 + MLT1C LTR MaLR 317 467 0 1776 156 16 41 chr10 8765646 8765966 -131550799 - AluJb SINE Alu 0 312 1 1161 163 8 145 chr10 8766845 8767245 -131549520 - MLT1B LTR MaLR -3 387 43 191 367 0 22 chr10 8768146 8768236 -131548529 + MIR SINE MIR 25 112 -96 2613 82 13 16 chr10 8768312 8768688 -131548077 - THE1C LTR MaLR 0 375 1 25 0 0 0 chr10 8770029 8770054 -131546711 + AT_rich Low_complexity Low_complexity 1 25 0 1142 211 0 31 chr10 8770085 8770312 -131546453 - AluJo SINE Alu -92 220 1 23 0 0 0 chr10 8770851 8770874 -131545891 + AT_rich Low_complexity Low_complexity 1 23 0 699 202 93 0 chr10 8771449 8771578 -131545187 + FAM SINE Alu 18 158 -27 993 104 6 12 chr10 8771578 8771751 -131545014 + (GAAA)n Simple_repeat Simple_repeat 1 172 0 314 154 0 15 chr10 8771781 8771846 -131544919 + GA-rich Low_complexity Low_complexity 1 64 0 1836 115 83 0 chr10 8772262 8772540 -131544225 - AluSx SINE Alu -10 302 2 320 338 50 14 chr10 8772609 8772748 -131544017 - L2 LINE L2 -5 3308 3165 249 245 337 0 chr10 8772847 8772945 -131543820 + L2 LINE L2 3182 3312 -1 298 322 152 23 chr10 8772969 8773317 -131543448 - L2 LINE L2 -56 3257 2865 1254 158 0 19 chr10 8773540 8773749 -131543016 + AluJo SINE Alu 86 290 -22 1830 164 65 14 chr10 8774188 8774559 -131542206 + MLT1B LTR MaLR 1 390 0 1840 125 0 4 chr10 8774783 8775039 -131541726 + AluSx SINE Alu 1 255 -57 234 0 0 0 chr10 8775088 8775114 -131541651 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 2187 98 0 0 chr10 8775234 8775568 -131541197 + AluSq SINE Alu 1 334 0 483 200 56 0 chr10 8775926 8776016 -131540749 + FRAM SINE Alu 39 133 -43 1562 189 17 14 chr10 8776348 8776644 -131540121 - AluJo SINE Alu -15 297 1 200 135 0 27 chr10 8777534 8777571 -131539194 + (TTG)n Simple_repeat Simple_repeat 1 36 0 2225 109 0 3 chr10 8777881 8778175 -131538590 + AluSc SINE Alu 1 293 -16 329 287 130 0 chr10 8779131 8779239 -131537526 - L2 LINE L2 0 3313 3192 3035 166 42 5 chr10 8781577 8782143 -131534622 - L1PA16 LINE L1 -4 6162 5576 227 182 0 0 chr10 8782383 8782427 -131534338 + A-rich Low_complexity Low_complexity 3 46 0 1875 167 0 13 chr10 8784602 8784902 -131531863 + AluJo SINE Alu 1 296 -16 22 35 0 0 chr10 8785023 8785052 -131531713 + AT_rich Low_complexity Low_complexity 1 29 0 1984 181 37 5 chr10 8785102 8785532 -131531233 - L1MA9 LINE L1 -36 6276 5833 694 275 65 63 chr10 8785532 8785990 -131530775 - MLT1J LTR MaLR -4 507 49 759 280 27 43 chr10 8786224 8786481 -131530284 - MIR SINE MIR 0 262 11 624 252 8 0 chr10 8787078 8787205 -131529560 + MIR SINE MIR 5 132 -130 1961 131 57 35 chr10 8787234 8787601 -131529164 - THE1C LTR MaLR 0 375 1 468 300 81 25 chr10 8787672 8787832 -131528933 - MIR SINE MIR -74 188 20 283 363 67 0 chr10 8789442 8789577 -131527188 - MIR SINE MIR -109 153 10 233 410 8 0 chr10 8791192 8791314 -131525451 + L2 LINE L2 2866 2988 -284 266 73 24 0 chr10 8791331 8791372 -131525393 + (TTCC)n Simple_repeat Simple_repeat 2 43 0 1799 169 51 0 chr10 8791393 8791746 -131525019 - AluJb SINE Alu 0 312 113 369 0 0 0 chr10 8791746 8791787 -131524978 + (TTTAA)n Simple_repeat Simple_repeat 3 43 0 1799 169 51 0 chr10 8791787 8791907 -131524858 - AluJb SINE Alu -199 113 1 1890 197 135 11 chr10 8792689 8792916 -131523849 - MLT2B1 LTR ERVL -12 508 311 504 0 0 0 chr10 8792916 8792972 -131523793 + (GA)n Simple_repeat Simple_repeat 1 56 0 1890 197 135 11 chr10 8792972 8793196 -131523569 - MLT2B1 LTR ERVL -209 311 1 27 0 0 0 chr10 8793229 8793256 -131523509 + AT_rich Low_complexity Low_complexity 1 27 0 205 313 15 0 chr10 8793364 8793431 -131523334 + L2 LINE L2 3202 3269 -3 5337 260 95 19 chr10 8793453 8794504 -131522261 - L1MEc LINE L1 -3613 2602 1632 264 30 0 0 chr10 8794504 8794537 -131522228 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 5337 260 95 19 chr10 8794537 8795910 -131520855 - L1MEc LINE L1 -4583 1632 47 446 274 113 21 chr10 8797636 8797822 -131518943 + MIR SINE MIR 59 261 -1 231 391 115 0 chr10 8798020 8798212 -131518553 + L3b LINE CR1 1350 1563 -20 1683 180 32 42 chr10 8798472 8798850 -131517915 - MLT1A2 LTR MaLR 0 374 1 1975 119 96 94 chr10 8799026 8799453 -131517312 - MSTA LTR MaLR 0 428 1 797 243 29 9 chr10 8801705 8801915 -131514850 - MER58A DNA MER1_type -8 216 3 424 214 97 62 chr10 8803124 8803269 -131513496 + MIR SINE MIR 99 248 -14 450 79 0 0 chr10 8803698 8803761 -131513004 + (CA)n Simple_repeat Simple_repeat 2 64 0 533 295 23 29 chr10 8805365 8805538 -131511227 - MIR3 SINE MIR -7 201 30 2179 96 19 29 chr10 8805693 8806007 -131510758 - AluY SINE Alu 0 311 1 23 0 0 0 chr10 8806339 8806362 -131510403 + AT_rich Low_complexity Low_complexity 1 23 0 223 320 87 0 chr10 8806807 8806910 -131509855 - MIR SINE MIR -46 216 105 1012 249 119 21 chr10 8807134 8807603 -131509162 - L1ME1 LINE L1 -8 6158 5644 278 273 11 68 chr10 8807821 8807909 -131508856 - L2 LINE L2 -1 3271 3189 198 0 0 0 chr10 8808012 8808034 -131508731 + (TG)n Simple_repeat Simple_repeat 1 22 0 * 543 16 0 0 chr10 8808033 8808097 -131508668 + (GA)n Simple_repeat Simple_repeat 1 64 0 299 130 19 0 chr10 8808827 8808881 -131507884 + (TA)n Simple_repeat Simple_repeat 2 56 0 324 233 11 22 chr10 8808889 8808979 -131507786 + L1MC4 LINE L1 6614 6702 -1340 260 266 11 21 chr10 8808982 8809076 -131507689 + (TA)n Simple_repeat Simple_repeat 1 93 0 526 148 16 23 chr10 8809087 8809215 -131507550 + (CATATA)n Simple_repeat Simple_repeat 2 128 0 183 264 0 57 chr10 8809877 8809930 -131506835 + MIR SINE MIR 205 254 -8 455 276 56 60 chr10 8810538 8810623 -131506142 - MIR SINE MIR 0 262 178 1801 159 48 40 chr10 8810623 8810995 -131505770 - THE1C LTR MaLR 0 375 1 455 276 56 60 chr10 8810995 8811141 -131505624 - MIR SINE MIR -84 178 32 651 230 63 0 chr10 8811275 8811449 -131505316 + MER58B DNA MER1_type 1 185 -156 639 255 31 0 chr10 8811521 8811682 -131505083 + MER58B DNA MER1_type 176 341 0 561 91 0 0 chr10 8811721 8811798 -131504967 - AluSc SINE Alu -180 129 53 772 252 55 18 chr10 8811897 8812115 -131504650 + MIR SINE MIR 32 257 -5 1655 128 45 0 chr10 8812551 8812794 -131503971 - AluSc SINE Alu -3 306 53 189 171 0 0 chr10 8812906 8812941 -131503824 + G-rich Low_complexity Low_complexity 1 35 0 1715 174 31 0 chr10 8813057 8813351 -131503414 + AluJo SINE Alu 1 303 -9 567 296 6 23 chr10 8813796 8813968 -131502797 + MIR SINE MIR 48 216 -46 322 353 92 0 chr10 8814054 8814207 -131502558 - MIR SINE MIR -72 190 24 2211 103 23 10 chr10 8815409 8815710 -131501055 - AluSq SINE Alu -8 305 1 400 345 78 14 chr10 8815969 8816250 -131500515 - L1ME4a LINE L1 -265 5856 5558 207 100 0 0 chr10 8816299 8816329 -131500436 + (GAAAA)n Simple_repeat Simple_repeat 2 31 0 1605 157 27 27 chr10 8816477 8816771 -131499994 - AluJo SINE Alu -18 294 1 2015 135 0 0 chr10 8816817 8817098 -131499667 + AluSx SINE Alu 1 281 -31 243 0 0 0 chr10 8817102 8817129 -131499636 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 578 312 113 0 chr10 8817157 8817378 -131499387 - MIR SINE MIR 0 262 17 1039 242 107 0 chr10 8817406 8817750 -131499015 - L1MB7 LINE L1 0 6184 5790 22 35 0 0 chr10 8818428 8818457 -131498308 + AT_rich Low_complexity Low_complexity 1 29 0 387 0 0 0 chr10 8818481 8818524 -131498241 + (CA)n Simple_repeat Simple_repeat 2 44 0 2086 117 0 26 chr10 8819837 8820144 -131496621 - AluSx SINE Alu -12 300 2 463 300 78 120 chr10 8820584 8821023 -131495742 - L2 LINE L2 -549 2765 2354 1485 192 8 0 chr10 8821023 8821283 -131495482 - AluJb SINE Alu -8 304 43 463 300 78 120 chr10 8821283 8821409 -131495356 - L2 LINE L2 -960 2354 2224 482 238 12 93 chr10 8821898 8822070 -131494695 - MIR SINE MIR -49 213 56 2139 133 0 22 chr10 8822739 8823056 -131493709 - AluSx SINE Alu -2 310 1 227 264 19 0 chr10 8824567 8824620 -131492145 - Charlie8 DNA MER1_type -2363 54 1 398 300 53 35 chr10 8825431 8825658 -131491107 + MLT1L LTR MaLR 368 598 -17 426 304 21 42 chr10 8825797 8825988 -131490777 + MIR SINE MIR 36 222 -40 273 156 39 0 chr10 8826006 8826083 -131490682 + (TA)n Simple_repeat Simple_repeat 1 80 0 2251 87 0 10 chr10 8826083 8826372 -131490393 - AluY SINE Alu -25 286 1 426 305 35 17 chr10 8826440 8826614 -131490151 - MIR SINE MIR -77 185 9 380 303 72 31 chr10 8826703 8826901 -131489864 - MIR SINE MIR -18 244 45 213 321 0 0 chr10 8827872 8827925 -131488840 - MIR3 SINE MIR -42 166 114 631 293 64 48 chr10 8827930 8828179 -131488586 - MIR SINE MIR 0 262 10 230 0 33 0 chr10 8828317 8828347 -131488418 + (CA)n Simple_repeat Simple_repeat 2 32 0 1215 128 159 23 chr10 8828891 8829148 -131487617 + L1MC1 LINE L1 5322 5613 -720 686 111 157 0 chr10 8829149 8829257 -131487508 - FLAM_C SINE Alu -18 125 1 1626 184 3 14 chr10 8829265 8829559 -131487206 - AluJo SINE Alu 0 312 22 4040 154 33 0 chr10 8829560 8830266 -131486499 + L1MC1 LINE L1 5605 6333 0 206 374 0 0 chr10 8830482 8830573 -131486192 + (TATATG)n Simple_repeat Simple_repeat 4 94 0 300 359 49 0 chr10 8831442 8831584 -131485181 - MIR SINE MIR 0 262 114 2350 113 0 0 chr10 8831636 8831946 -131484819 - AluSx SINE Alu -2 310 1 615 335 35 19 chr10 8832131 8832388 -131484377 + MIR SINE MIR 2 262 0 350 115 16 0 chr10 8832960 8833021 -131483744 + (TTCC)n Simple_repeat Simple_repeat 2 63 0 1112 82 6 22 chr10 8833035 8833217 -131483548 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 326 286 22 0 chr10 8833225 8833316 -131483449 + CT-rich Low_complexity Low_complexity 3 95 0 213 288 17 0 chr10 8835430 8835489 -131481276 + MIR3 SINE MIR 106 165 -43 2282 119 0 0 chr10 8836336 8836629 -131480136 + AluSx SINE Alu 3 295 -17 21 0 0 0 chr10 8837065 8837086 -131479679 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr10 8838730 8838768 -131477997 + AT_rich Low_complexity Low_complexity 1 38 0 33 43 0 0 chr10 8838946 8838993 -131477772 + AT_rich Low_complexity Low_complexity 1 47 0 195 184 0 0 chr10 8841479 8841517 -131475248 + (CA)n Simple_repeat Simple_repeat 1 38 0 212 374 65 9 chr10 8842518 8842625 -131474140 - MIR SINE MIR -103 159 47 1832 197 35 12 chr10 8843314 8843698 -131473067 - MER45B DNA AcHobo -541 1040 667 198 0 0 0 chr10 8843698 8843720 -131473045 + (TA)n Simple_repeat Simple_repeat 2 23 0 2241 70 0 0 chr10 8843720 8843990 -131472775 - AluSg SINE Alu -17 293 24 1832 197 35 12 chr10 8843990 8844026 -131472739 - MER45B DNA AcHobo -913 668 609 1108 264 71 10 chr10 8844022 8844333 -131472432 - MER45B DNA AcHobo -710 330 1 * 2148 100 0 7 chr10 8844618 8844897 -131471868 + AluSq SINE Alu 1 277 -36 375 23 0 0 chr10 8844898 8844942 -131471823 + (TAA)n Simple_repeat Simple_repeat 1 44 0 1984 158 0 0 chr10 8844957 8845261 -131471504 + AluJb SINE Alu 9 312 0 484 263 0 8 chr10 8845715 8845833 -131470932 - MIR SINE MIR -10 252 136 336 222 111 46 chr10 8845830 8845913 -131470852 + MIR SINE MIR 18 111 -151 * 2594 107 3 8 chr10 8845913 8846279 -131470486 - THE1B LTR MaLR 0 364 1 336 222 111 46 chr10 8846279 8846303 -131470462 + MIR SINE MIR 111 132 -130 22 0 0 0 chr10 8846693 8846715 -131470050 + AT_rich Low_complexity Low_complexity 1 22 0 198 361 165 0 chr10 8846721 8846818 -131469947 + MIR SINE MIR 33 145 -63 1042 159 107 83 chr10 8847487 8847814 -131468951 + MSTB1 LTR MaLR 3 337 -95 373 41 0 0 chr10 8847814 8847863 -131468902 - MADE1 DNA Mariner 0 80 32 25 0 0 0 chr10 8847949 8847974 -131468791 + AT_rich Low_complexity Low_complexity 1 25 0 2372 78 0 29 chr10 8847978 8848285 -131468480 + AluSx SINE Alu 1 298 -14 803 366 62 14 chr10 8848935 8849372 -131467393 - L3 LINE CR1 -967 610 153 466 282 38 132 chr10 8849576 8849970 -131466795 - L2 LINE L2 -54 3218 2862 344 264 99 19 chr10 8851447 8851768 -131464997 + L1M4c LINE L1 1370 1882 -4621 1830 289 52 25 chr10 8852103 8853125 -131463640 + L1ME3A LINE L1 1114 2163 -4233 1529 191 66 3 chr10 8853125 8853413 -131463352 + AluJo SINE Alu 1 306 -6 1205 125 0 17 chr10 8853413 8853589 -131463176 + AluSg/x SINE Alu 132 304 -6 2157 266 43 55 chr10 8853591 8855072 -131461693 + L1ME3A LINE L1 2152 3574 -2641 557 253 43 6 chr10 8855071 8855233 -131461532 + L1ME3A LINE L1 4074 4241 -1974 * 456 171 178 79 chr10 8855275 8855427 -131461338 - MLT1B LTR MaLR -223 167 1 21 0 0 0 chr10 8855471 8855492 -131461273 + AT_rich Low_complexity Low_complexity 1 21 0 4473 59 2 0 chr10 8855502 8856061 -131460704 + L1PA7 LINE L1 5591 6150 -4 2653 216 36 43 chr10 8856064 8856368 -131460397 + L1ME1 LINE L1 5189 5493 -673 1301 192 123 18 chr10 8856368 8856644 -131460121 + AluJb SINE Alu 1 305 -7 2653 216 36 43 chr10 8856644 8857279 -131459486 + L1ME1 LINE L1 5493 6122 -44 373 283 92 6 chr10 8857375 8857548 -131459217 + L1ME3A LINE L1 4401 4588 -1627 276 91 0 0 chr10 8857601 8857645 -131459120 + (TG)n Simple_repeat Simple_repeat 1 44 0 776 270 97 58 chr10 8857712 8857806 -131458959 + L1ME3A LINE L1 4765 4854 -1385 2535 108 5 24 chr10 8857806 8858175 -131458590 - THE1B LTR MaLR 0 364 3 776 270 97 58 chr10 8858175 8859281 -131457484 + L1ME3A LINE L1 4854 6018 -221 234 0 0 0 chr10 8859551 8859577 -131457188 + (T)n Simple_repeat Simple_repeat 1 26 0 237 329 120 19 chr10 8860048 8860206 -131456559 + MIR SINE MIR 28 201 -61 2288 118 0 0 chr10 8861660 8861964 -131454801 - AluSg SINE Alu -6 304 1 848 148 8 0 chr10 8861982 8862104 -131454661 - FLAM_C SINE Alu -19 124 2 470 291 114 29 chr10 8863710 8863920 -131452845 - MIR SINE MIR -13 249 22 531 339 15 0 chr10 8864757 8864952 -131451813 + MIR SINE MIR 63 260 -2 222 160 20 20 chr10 8865208 8865258 -131451507 + GA-rich Low_complexity Low_complexity 2 51 0 266 305 23 69 chr10 8868525 8868656 -131448109 - MIR SINE MIR -73 189 65 2246 105 7 0 chr10 8869961 8870256 -131446509 - AluSx SINE Alu -15 297 1 407 325 48 48 chr10 8870315 8870503 -131446262 - MER5A DNA MER1_type -1 188 1 28 48 0 0 chr10 8872183 8872225 -131444540 + AT_rich Low_complexity Low_complexity 1 42 0 2078 124 0 0 chr10 8872227 8872534 -131444231 + AluSx SINE Alu 1 307 0 345 296 21 21 chr10 8872534 8872676 -131444089 + MIR SINE MIR 121 262 0 749 250 44 44 chr10 8873269 8873517 -131443248 + MIR SINE MIR 14 261 -1 2258 124 0 0 chr10 8873725 8874031 -131442734 - AluSx SINE Alu -6 306 1 489 34 0 0 chr10 8874591 8874650 -131442115 + (TTTC)n Simple_repeat Simple_repeat 3 61 0 2242 114 10 0 chr10 8875277 8875610 -131441155 - AluSc SINE Alu 0 336 1 1228 160 48 72 chr10 8875768 8876016 -131440749 + MER33 DNA MER1_type 2 242 -2343 3540 87 16 0 chr10 8876016 8876508 -131440257 - L1PA8 LINE L1 -13 6159 5660 1228 160 48 72 chr10 8876508 8876590 -131440175 + MER33 DNA MER1_type 242 324 0 217 154 26 0 chr10 8876950 8876989 -131439776 + GA-rich Low_complexity Low_complexity 1 40 0 29 0 0 0 chr10 8877177 8877206 -131439559 + AT_rich Low_complexity Low_complexity 1 29 0 2165 142 0 0 chr10 8877206 8877501 -131439264 + AluSg SINE Alu 1 295 -15 739 200 0 0 chr10 8877515 8877635 -131439130 - FLAM_C SINE Alu -23 120 1 22 0 0 0 chr10 8878659 8878681 -131438084 + AT_rich Low_complexity Low_complexity 1 22 0 263 331 65 48 chr10 8879148 8879272 -131437493 + MIR SINE MIR 20 145 -63 224 372 141 26 chr10 8879359 8879926 -131436839 - L2 LINE L2 -411 2903 2272 3146 173 28 11 chr10 8880018 8880664 -131436101 + L1MB8 LINE L1 5520 6176 -2 312 282 48 24 chr10 8880752 8880876 -131435889 + L1MEd LINE L1 2 128 -5991 602 318 125 24 chr10 8880995 8881458 -131435307 + L1MEd LINE L1 260 769 -5350 500 290 12 35 chr10 8881781 8881950 -131434815 + MIR SINE MIR 20 184 -78 294 316 95 6 chr10 8882061 8882219 -131434546 + LTR16A LTR ERVL 111 282 -168 1052 161 71 14 chr10 8883864 8884075 -131432690 + AluJb SINE Alu 90 312 0 239 271 43 0 chr10 8884807 8884877 -131431888 - MIR SINE MIR -188 74 2 641 263 75 42 chr10 8884945 8885158 -131431607 - MIR SINE MIR -33 229 10 187 304 0 0 chr10 8885177 8885223 -131431542 - L3 LINE CR1 -12 1565 1520 229 355 0 11 chr10 8885224 8885317 -131431448 - MIR SINE MIR -118 144 53 1761 148 4 11 chr10 8885536 8885813 -131430952 + AluSx SINE Alu 1 275 -37 1117 56 25 0 chr10 8885818 8885978 -131430787 + (GAAA)n Simple_repeat Simple_repeat 2 165 0 267 103 0 0 chr10 8885978 8886017 -131430748 + (CAGG)n Simple_repeat Simple_repeat 1 39 0 200 299 51 43 chr10 8887528 8887645 -131429120 - L2 LINE L2 -6 3307 3190 482 311 33 0 chr10 8888125 8888308 -131428457 + MER5A DNA MER1_type 1 189 0 2536 90 11 25 chr10 8888832 8889197 -131427568 - THE1B LTR MaLR -4 360 1 2183 154 16 102 chr10 8889255 8889755 -131427010 - LTR32 LTR ERVL 0 471 15 23 0 0 0 chr10 8890986 8891009 -131425756 + AT_rich Low_complexity Low_complexity 1 23 0 1939 147 27 0 chr10 8892668 8892961 -131423804 - AluJb SINE Alu -11 301 1 205 358 63 21 chr10 8893240 8893335 -131423430 - L2 LINE L2 -33 3280 3182 244 274 16 24 chr10 8893352 8893476 -131423289 + (TA)n Simple_repeat Simple_repeat 1 123 0 26 88 0 0 chr10 8893873 8893941 -131422824 + AT_rich Low_complexity Low_complexity 1 68 0 809 181 0 0 chr10 8893968 8894101 -131422664 - FLAM_C SINE Alu 0 133 1 401 144 0 44 chr10 8894138 8894228 -131422537 + MER53 DNA DNA 102 187 -2 225 315 63 55 chr10 8894341 8894468 -131422297 - MIR SINE MIR -132 130 3 446 224 13 90 chr10 8894814 8894970 -131421795 - MIR SINE MIR -48 214 71 183 200 0 0 chr10 8895108 8895143 -131421622 + MIR SINE MIR 73 107 -155 26 30 0 0 chr10 8895972 8896005 -131420760 + AT_rich Low_complexity Low_complexity 1 33 0 204 283 55 97 chr10 8898177 8898322 -131418443 + MIR SINE MIR 20 158 -50 561 133 80 44 chr10 8899506 8899619 -131417146 - FLAM_C SINE Alu -26 117 1 5005 138 25 7 chr10 8901068 8901913 -131414852 + L1PB4 LINE L1 4934 5811 -345 327 25 0 0 chr10 8901913 8901953 -131414812 + (CA)n Simple_repeat Simple_repeat 2 41 0 5005 138 25 7 chr10 8901953 8902298 -131414467 + L1PB4 LINE L1 5811 6148 -8 252 317 64 94 chr10 8902699 8903027 -131413738 + L2 LINE L2 2874 3191 -81 633 216 26 0 chr10 8903230 8903346 -131413419 - 5S rRNA rRNA -2 119 1 22 0 0 0 chr10 8903545 8903567 -131413198 + AT_rich Low_complexity Low_complexity 1 22 0 279 228 127 111 chr10 8903609 8904043 -131412722 - HAL1b LINE L1 -37 1311 871 217 186 29 0 chr10 8904089 8904159 -131412606 + (TA)n Simple_repeat Simple_repeat 1 72 0 325 325 40 15 chr10 8904303 8904503 -131412262 - HAL1b LINE L1 -730 618 414 22 0 0 0 chr10 8905066 8905088 -131411677 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr10 8905851 8905874 -131410891 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 2026 101 11 14 chr10 8905876 8906152 -131410613 - AluSx SINE Alu -31 281 7 283 327 74 0 chr10 8906430 8906592 -131410173 + L1ME LINE L1 5629 5802 -319 409 253 12 0 chr10 8907729 8907891 -131408874 + (TA)n Simple_repeat Simple_repeat 2 165 0 2108 110 6 0 chr10 8907891 8908219 -131408546 + L1P5 LINE L1 5419 5748 -408 561 158 0 0 chr10 8908245 8908346 -131408419 + (CA)n Simple_repeat Simple_repeat 2 102 0 1980 154 0 3 chr10 8910387 8910699 -131406066 - AluSx SINE Alu -1 311 1 22 94 0 0 chr10 8911275 8911339 -131405426 + AT_rich Low_complexity Low_complexity 1 64 0 224 301 36 12 chr10 8911742 8911825 -131404940 - L2 LINE L2 -212 3060 2976 287 263 0 50 chr10 8911929 8912028 -131404737 - MIR SINE MIR -51 211 118 219 156 0 78 chr10 8912360 8912424 -131404341 + A-rich Low_complexity Low_complexity 2 60 0 441 0 0 0 chr10 8913282 8913331 -131403434 + (CA)n Simple_repeat Simple_repeat 2 50 0 1949 144 18 0 chr10 8913351 8913628 -131403137 - AluSx SINE Alu -30 282 1 233 357 57 21 chr10 8913728 8913868 -131402897 - L2 LINE L2 -2 3311 3167 379 316 58 23 chr10 8914027 8914201 -131402564 - MIR SINE MIR -20 242 63 1325 192 106 32 chr10 8914369 8914738 -131402027 - MLT1F LTR MaLR -4 538 143 1884 123 75 34 chr10 8914762 8915120 -131401645 - THE1C LTR MaLR -2 373 1 727 242 0 0 chr10 8917442 8917603 -131399162 - L1PB4 LINE L1 -2 6154 5994 249 57 0 0 chr10 8917664 8917699 -131399066 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 29 28 0 0 chr10 8917744 8917780 -131398985 + AT_rich Low_complexity Low_complexity 1 36 0 485 247 50 119 chr10 8918732 8918976 -131397789 - MLT1A1 LTR MaLR -3 587 312 1100 145 21 21 chr10 8919004 8919197 -131397568 - MLT1A1 LTR MaLR -171 194 2 668 113 19 0 chr10 8919197 8919303 -131397462 + L1MB7 LINE L1 6069 6176 -8 375 160 32 43 chr10 8919304 8919398 -131397367 + Charlie5 DNA MER1_type 2523 2615 0 25 31 0 0 chr10 8919968 8920000 -131396765 + AT_rich Low_complexity Low_complexity 1 32 0 205 200 0 0 chr10 8920286 8920326 -131396439 + T-rich Low_complexity Low_complexity 1 40 0 1572 85 4 17 chr10 8920394 8920629 -131396136 - L1MA2 LINE L1 0 6304 6073 25 0 0 0 chr10 8921074 8921099 -131395666 + AT_rich Low_complexity Low_complexity 1 25 0 1895 152 37 37 chr10 8922429 8922804 -131393961 - THE1C LTR MaLR 0 375 1 426 300 8 8 chr10 8923380 8923510 -131393255 + MLT1L LTR MaLR 24 153 -462 617 281 88 12 chr10 8923513 8923684 -131393081 + MER5A DNA MER1_type 2 185 -4 1098 288 47 32 chr10 8923684 8924149 -131392616 + MLT1L LTR MaLR 144 615 0 315 0 0 0 chr10 8924992 8925027 -131391738 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 989 113 78 0 chr10 8925027 8925168 -131391597 - AluSp SINE Alu -32 281 130 267 54 0 0 chr10 8925291 8925328 -131391437 + (T)n Simple_repeat Simple_repeat 1 37 0 966 106 8 0 chr10 8925328 8925460 -131391305 - AluSp SINE Alu -180 133 1 267 41 61 0 chr10 8925754 8925803 -131390962 + (TA)n Simple_repeat Simple_repeat 1 52 0 3529 151 27 5 chr10 8925831 8926093 -131390672 + L1PB4 LINE L1 5520 5775 -381 234 62 0 0 chr10 8926093 8926125 -131390640 + (CA)n Simple_repeat Simple_repeat 2 33 0 3529 151 27 5 chr10 8926125 8926484 -131390281 + L1PB4 LINE L1 5775 6155 -1 516 125 0 0 chr10 8926566 8926646 -131390119 + MADE1 DNA Mariner 1 80 0 236 301 43 32 chr10 8927324 8927417 -131389348 - MIR SINE MIR -15 247 154 1155 77 6 22 chr10 8927927 8928110 -131388655 + (TTC)n Simple_repeat Simple_repeat 1 180 0 610 169 22 0 chr10 8928110 8928246 -131388519 + CT-rich Low_complexity Low_complexity 4 142 0 1750 136 4 0 chr10 8928263 8928514 -131388251 - AluSp SINE Alu -23 290 39 192 125 0 0 chr10 8929039 8929071 -131387694 + (TAA)n Simple_repeat Simple_repeat 2 33 0 329 280 75 0 chr10 8929077 8929170 -131387595 - MIR SINE MIR -3 259 160 501 250 30 18 chr10 8930865 8931033 -131385732 - MER96B DNA MER1_type? -247 170 1 200 184 20 0 chr10 8931113 8931162 -131385603 + GA-rich Low_complexity Low_complexity 3 52 0 1144 62 0 0 chr10 8931205 8931351 -131385414 - L1P3 LINE L1 -595 5559 5414 3871 71 4 2 chr10 8931351 8931858 -131384907 + L1PA7 LINE L1 5627 6135 -19 1610 192 0 19 chr10 8932921 8933229 -131383536 - AluJo SINE Alu -10 302 1 2180 114 0 16 chr10 8934112 8934419 -131382346 + AluSx SINE Alu 1 302 -10 263 286 26 13 chr10 8936006 8936083 -131380682 + MIR SINE MIR 18 95 -167 243 358 36 21 chr10 8936140 8936333 -131380432 + L2 LINE L2 3118 3313 0 2379 38 7 3 chr10 8936504 8936797 -131379968 - L1PA4 LINE L1 0 6155 5862 357 211 103 51 chr10 8936797 8936894 -131379871 - FLAM_A SINE Alu -31 102 22 22 70 0 0 chr10 8937045 8937088 -131379677 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr10 8937920 8937941 -131378824 + AT_rich Low_complexity Low_complexity 1 21 0 974 278 45 42 chr10 8938015 8938396 -131378369 + L1ME LINE L1 3 384 -5686 388 91 152 0 chr10 8938989 8939055 -131377710 + MADE1 DNA Mariner 5 80 0 409 260 179 36 chr10 8939450 8939646 -131377119 + MIR SINE MIR 13 236 -26 271 266 89 57 chr10 8939661 8939785 -131376980 - MIR SINE MIR -25 237 110 3555 77 30 10 chr10 8940210 8940717 -131376048 + L1PA13 LINE L1 5646 6162 -1 2206 123 0 0 chr10 8941723 8942025 -131374740 + AluSx SINE Alu 1 302 -10 242 217 22 0 chr10 8942309 8942355 -131374410 + AluJ/monomer SINE Alu 1 47 -254 2090 126 0 0 chr10 8942874 8943167 -131373598 + AluSc SINE Alu 1 293 -16 341 378 25 51 chr10 8943399 8943714 -131373051 - L2 LINE L2 0 3272 2966 2390 88 0 0 chr10 8945998 8946295 -131370470 + AluSg SINE Alu 1 297 -13 322 236 113 0 chr10 8946604 8946710 -131370055 - L1ME4a LINE L1 -1 6120 6003 366 316 23 0 chr10 8946905 8947079 -131369686 - L1ME4a LINE L1 -237 5884 5707 249 269 39 58 chr10 8947092 8947196 -131369569 + L2 LINE L2 3212 3313 0 228 241 0 0 chr10 8947221 8947275 -131369490 - L1ME4a LINE L1 -461 5660 5607 37 0 0 0 chr10 8947486 8947523 -131369242 + AT_rich Low_complexity Low_complexity 1 37 0 507 270 167 15 chr10 8947754 8947958 -131368807 + MIR SINE MIR 12 246 -16 207 0 0 0 chr10 8949937 8949960 -131366805 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 446 327 32 46 chr10 8950233 8950450 -131366315 + MIR SINE MIR 48 261 -1 1788 72 42 0 chr10 8950912 8951149 -131365616 - L1P4 LINE L1 -448 5713 5467 2145 101 3 0 chr10 8951153 8951463 -131365302 + AluSg SINE Alu 1 311 0 2286 124 3 3 chr10 8951465 8951819 -131364946 + L1PA14 LINE L1 5806 6159 -2 339 169 0 0 chr10 8951955 8952031 -131364734 - AluS SINE Alu -240 61 2 1509 193 3 0 chr10 8952031 8952347 -131364418 - L1M4 LINE L1 -1689 5478 5162 418 288 122 14 chr10 8952411 8952721 -131364044 - L1ME4a LINE L1 -755 5391 5143 381 318 69 11 chr10 8953947 8954183 -131362582 + MLT1J2 LTR MaLR 1 210 -240 841 369 109 3 chr10 8954478 8955111 -131361654 - L2 LINE L2 0 3313 2614 327 332 117 19 chr10 8955100 8955305 -131361460 + MIR SINE MIR 29 253 -9 * 480 301 81 35 chr10 8955659 8955832 -131360933 - MIR SINE MIR -48 214 34 7710 209 41 18 chr10 8955841 8956756 -131360009 - L1M4 LINE L1 -1953 5214 4322 441 36 0 0 chr10 8956756 8956811 -131359954 + (TG)n Simple_repeat Simple_repeat 1 55 0 1663 176 0 47 chr10 8956812 8957108 -131359657 - AluJo SINE Alu -30 282 1 7710 209 41 18 chr10 8957108 8958125 -131358640 - L1M4 LINE L1 -2844 4323 3235 225 0 0 0 chr10 8958179 8958204 -131358561 + (TG)n Simple_repeat Simple_repeat 2 26 0 1638 127 0 4 chr10 8958228 8958464 -131358301 - AluSx SINE Alu -77 235 1 3103 266 54 17 chr10 8958475 8960321 -131356444 - L1M4 LINE L1 -3944 3223 1614 499 261 67 0 chr10 8961286 8961405 -131355360 - FLAM_A SINE Alu -6 127 1 265 204 0 0 chr10 8962517 8962566 -131354199 - MIR3 SINE MIR -6 202 154 1968 121 0 16 chr10 8962727 8963041 -131353724 - L1PA13 LINE L1 -1 6162 5854 402 183 11 32 chr10 8963041 8963134 -131353631 - THE1C LTR MaLR 0 428 338 1315 141 65 43 chr10 8963239 8963516 -131353249 - THE1C LTR MaLR -91 284 2 392 154 0 0 chr10 8963517 8963582 -131353183 - L1PA13 LINE L1 -305 5858 5794 1849 149 21 0 chr10 8963584 8963872 -131352893 - AluJb SINE Alu -18 294 1 21 0 0 0 chr10 8964218 8964239 -131352526 + AT_rich Low_complexity Low_complexity 1 21 0 2170 220 121 30 chr10 8965224 8965274 -131351491 - MLT1E1 LTR MaLR 0 654 610 2825 130 16 5 chr10 8965274 8965697 -131351068 + MSTA LTR MaLR 1 428 0 2170 220 121 30 chr10 8965697 8966253 -131350512 - MLT1E1 LTR MaLR -44 610 1 206 116 23 0 chr10 8968070 8968113 -131348652 + CT-rich Low_complexity Low_complexity 1 44 0 756 199 76 28 chr10 8968154 8968405 -131348360 + MER114 LTR ERV 235 497 -151 387 0 0 0 chr10 8968675 8968718 -131348047 + (TG)n Simple_repeat Simple_repeat 2 44 0 284 214 0 0 chr10 8969754 8969810 -131346955 + MER94 DNA DNA 75 130 -4 676 333 59 71 chr10 8969820 8970396 -131346369 + MLT1K LTR MaLR 2 570 -18 2881 9 0 0 chr10 8970750 8971068 -131345697 - AluYb8 SINE Alu 0 318 1 389 283 145 0 chr10 8971170 8971315 -131345450 + MIR SINE MIR 74 239 -23 5759 67 0 0 chr10 8971537 8972300 -131344465 - L1PA6 LINE L1 -991 5155 4393 6982 51 5 5 chr10 8972300 8973292 -131343473 + L1PA6 LINE L1 5148 6136 -18 1973 150 10 0 chr10 8973854 8974161 -131342604 - AluJb SINE Alu -2 310 1 720 275 29 35 chr10 8974427 8974656 -131342109 + MIR SINE MIR 22 249 -13 223 263 53 0 chr10 8974855 8974912 -131341853 + MIR3 SINE MIR 113 172 -36 858 136 0 0 chr10 8975162 8975294 -131341471 - L1MA2 LINE L1 -1 6303 6172 1584 159 32 2 chr10 8975858 8976249 -131340516 - L1MA7 LINE L1 -1 6290 5782 246 32 0 0 chr10 8976250 8976281 -131340484 + (CA)n Simple_repeat Simple_repeat 2 32 0 268 196 20 0 chr10 8976281 8976332 -131340433 + L1M2 LINE L1 5647 5698 -593 247 130 0 0 chr10 8976402 8976448 -131340317 + LTR66 LTR ERVL 394 439 -171 314 326 0 0 chr10 8976463 8976552 -131340213 - L1MC4 LINE L1 -1340 6702 6614 * 349 292 0 0 chr10 8976473 8976562 -131340203 + L1MC4 LINE L1 6615 6703 -1339 697 206 21 21 chr10 8976998 8977187 -131339578 - MER53 DNA DNA 0 189 1 288 0 0 0 chr10 8977714 8977746 -131339019 + (CA)n Simple_repeat Simple_repeat 1 32 0 2036 129 0 3 chr10 8978186 8978480 -131338285 + AluSx SINE Alu 1 293 -19 969 192 34 24 chr10 8978791 8978999 -131337766 - MER6B DNA MER2_type 0 210 1 2107 108 0 9 chr10 8979028 8979343 -131337422 - L1PB1 LINE L1 -7 6144 5833 221 379 21 0 chr10 8979472 8979567 -131337198 - MIR SINE MIR -69 139 43 220 276 5 0 chr10 8980114 8980169 -131336596 + MIR SINE MIR 43 100 -108 423 346 33 40 chr10 8983188 8983460 -131333305 + L1ME LINE L1 46 315 -5755 684 180 66 0 chr10 8983513 8983635 -131333130 - FLAM_A SINE Alu 0 133 4 404 244 40 49 chr10 8983934 8984159 -131332606 + L1ME LINE L1 526 748 -5322 236 100 0 20 chr10 8984396 8984446 -131332319 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 23 33 0 0 chr10 8985371 8985401 -131331364 + AT_rich Low_complexity Low_complexity 1 30 0 1741 138 0 0 chr10 8985403 8985657 -131331108 + AluSx SINE Alu 3 256 -56 189 0 0 0 chr10 8986642 8986663 -131330102 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2106 104 0 10 chr10 8986665 8986954 -131329811 - AluY SINE Alu -23 288 3 444 305 69 42 chr10 8987209 8987471 -131329294 - MER102a DNA MER1_type -19 311 43 21 36 0 0 chr10 8987956 8987984 -131328781 + AT_rich Low_complexity Low_complexity 1 28 0 288 0 0 0 chr10 8988810 8988842 -131327923 + (CAAAAA)n Simple_repeat Simple_repeat 4 35 0 212 302 93 35 chr10 8988854 8988940 -131327825 + MIR3 SINE MIR 115 205 -3 1741 91 4 0 chr10 8989631 8989861 -131326904 + AluSq SINE Alu 73 303 -10 2447 50 0 3 chr10 8990042 8990342 -131326423 - AluY SINE Alu -12 299 1 362 340 92 57 chr10 8991533 8991572 -131325193 + L1MEd LINE L1 375 411 -5794 4598 89 1 15 chr10 8991572 8992235 -131324530 + L1PA10 LINE L1 5514 6167 -1 362 340 92 57 chr10 8992235 8992651 -131324114 + L1MEd LINE L1 411 846 -5359 24 0 0 0 chr10 8992897 8992921 -131323844 + AT_rich Low_complexity Low_complexity 1 24 0 239 263 150 0 chr10 8993013 8993093 -131323672 - MLT1D-int LTR MaLR -274 1097 1006 828 275 34 0 chr10 8993307 8993514 -131323251 - MLT1D-int LTR MaLR -493 878 665 1941 239 39 41 chr10 8993563 8994198 -131322567 - MLT1D-int LTR MaLR -711 660 27 260 188 0 0 chr10 8994207 8994255 -131322510 - MLT1D-int LTR MaLR -1323 48 1 * 2066 217 58 6 chr10 8994255 8994735 -131322030 - MLT1D LTR MaLR 0 505 1 447 285 62 7 chr10 8994735 8994999 -131321766 + L1MEd LINE L1 2112 2393 -4003 274 265 103 0 chr10 8994973 8995109 -131321656 + L1MEd LINE L1 2204 2353 -3862 * 543 275 103 31 chr10 8995083 8995443 -131321322 + L1MEd LINE L1 2204 2589 -3626 394 264 42 36 chr10 8995420 8995613 -131321152 + L1ME3A LINE L1 1455 1648 -4748 * 198 71 0 0 chr10 8995639 8995667 -131321098 + (TG)n Simple_repeat Simple_repeat 1 28 0 317 265 100 29 chr10 8995797 8995967 -131320798 + L1ME3A LINE L1 3759 3940 -2275 333 303 179 6 chr10 8995970 8996132 -131320633 + MLT1J1 LTR MaLR 13 202 -244 1119 286 26 47 chr10 8996945 8997602 -131319163 + L1ME3A LINE L1 4694 5336 -879 192 179 0 0 chr10 8997645 8997684 -131319081 + (TA)n Simple_repeat Simple_repeat 2 40 0 549 313 61 16 chr10 8997706 8998016 -131318749 + L1ME3A LINE L1 5383 5706 -527 180 0 0 0 chr10 8998020 8998040 -131318725 + (TG)n Simple_repeat Simple_repeat 2 21 0 283 191 55 9 chr10 8998051 8998161 -131318604 + (TA)n Simple_repeat Simple_repeat 1 115 0 623 260 23 6 chr10 8998178 8998355 -131318410 + L1ME3A LINE L1 5759 5938 -301 480 235 43 9 chr10 8998714 8998829 -131317936 - MER20 DNA MER1_type -4 215 97 253 254 0 15 chr10 8999345 8999412 -131317353 + CT-rich Low_complexity Low_complexity 1 66 0 237 386 101 6 chr10 8999865 9000023 -131316742 + MIR SINE MIR 39 211 -51 321 26 0 0 chr10 9000566 9000604 -131316161 + (TG)n Simple_repeat Simple_repeat 1 38 0 23 0 0 0 chr10 9002925 9002948 -131313817 + AT_rich Low_complexity Low_complexity 1 23 0 26 64 0 0 chr10 9004857 9004904 -131311861 + AT_rich Low_complexity Low_complexity 1 47 0 26 74 0 0 chr10 9007303 9007357 -131309408 + AT_rich Low_complexity Low_complexity 1 54 0 25 51 0 0 chr10 9007402 9007441 -131309324 + AT_rich Low_complexity Low_complexity 1 39 0 583 292 71 40 chr10 9007947 9008173 -131308592 - MIR SINE MIR 0 262 30 285 167 0 0 chr10 9010571 9010625 -131306140 + (TG)n Simple_repeat Simple_repeat 1 54 0 222 37 0 0 chr10 9012215 9012242 -131304523 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1946 132 6 10 chr10 9012675 9012986 -131303779 - AluSg SINE Alu 0 310 1 245 323 42 31 chr10 9013544 9013640 -131303125 - MIR SINE MIR -62 146 50 468 0 0 0 chr10 9013871 9013923 -131302842 + (TTA)n Simple_repeat Simple_repeat 3 54 0 934 94 0 0 chr10 9013923 9014050 -131302715 - L1PA7 LINE L1 -18 6136 6010 702 346 115 40 chr10 9017793 9018516 -131298249 + L1MEd LINE L1 189 965 -5154 245 310 19 107 chr10 9018919 9019180 -131297585 + L1MEd LINE L1 488 725 -5394 1975 230 65 8 chr10 9019302 9019794 -131296971 - MLT2B1 LTR ERVL 0 520 1 435 300 39 58 chr10 9019881 9020546 -131296219 + L1MEd LINE L1 925 1616 -874 519 301 14 0 chr10 9020547 9020693 -131296072 - MLT1H LTR MaLR -315 234 87 2191 121 3 3 chr10 9020833 9021138 -131295627 + AluY SINE Alu 1 305 -6 324 270 111 11 chr10 9021139 9021328 -131295437 + L1ME3A LINE L1 5730 5937 -233 298 277 138 31 chr10 9021576 9021867 -131294898 + L1ME LINE L1 5463 5588 -533 38 51 0 0 chr10 9023067 9023126 -131293639 + AT_rich Low_complexity Low_complexity 1 59 0 338 295 47 31 chr10 9023705 9023834 -131292931 + MIR SINE MIR 129 259 -3 657 102 0 0 chr10 9023865 9023963 -131292802 - AluY SINE Alu -12 299 202 2010 80 0 28 chr10 9024120 9024407 -131292358 - L1PA13 LINE L1 -11 6152 5874 1239 63 0 0 chr10 9024407 9024565 -131292200 + L1P4 LINE L1 5649 5806 -362 666 173 126 136 chr10 9025371 9025399 -131291366 - L1M4 LINE L1 -1792 4852 4825 225 65 0 0 chr10 9025399 9025430 -131291335 + (TA)n Simple_repeat Simple_repeat 1 31 0 666 173 126 136 chr10 9025430 9025702 -131291063 - L1M4 LINE L1 -1819 4825 4555 1544 231 29 21 chr10 9025718 9025848 -131290917 + MLT2C1 LTR ERVL 3 130 -267 1530 96 50 0 chr10 9025848 9026066 -131290699 - MER30 DNA MER1_type 0 230 2 1544 231 29 21 chr10 9026066 9026321 -131290444 + MLT2C1 LTR ERVL 130 391 -6 2282 248 56 20 chr10 9026329 9027118 -131289647 - L1M4 LINE L1 -2105 4539 3723 1441 156 86 78 chr10 9027408 9027780 -131288985 - THE1C LTR MaLR 0 375 1 554 258 66 56 chr10 9027831 9028118 -131288647 - L1M4 LINE L1 -6229 313 24 365 197 2 0 chr10 9028120 9028191 -131288574 + MLT1H1 LTR MaLR 476 553 -2 584 282 115 16 chr10 9028343 9028666 -131288099 + MER20B DNA MER1_type 406 760 -23 2359 102 0 0 chr10 9028695 9028998 -131287767 - AluSc SINE Alu -6 303 1 2330 11 0 0 chr10 9029190 9029455 -131287310 - L1PA2 LINE L1 0 6155 5891 2087 125 0 3 chr10 9029774 9030097 -131286668 + AluSq SINE Alu 1 322 0 291 312 186 10 chr10 9030198 9030595 -131286170 - LTR33 LTR ERVL -36 485 19 1688 171 54 6 chr10 9030908 9031224 -131285541 - MER7A DNA MER2_type -17 329 1 1150 273 85 65 chr10 9033760 9034325 -131282440 - L1ME3A LINE L1 -11 6159 5584 195 42 0 0 chr10 9035757 9035781 -131280984 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 1111 231 148 13 chr10 9036014 9036317 -131280448 + MER2 DNA MER2_type 2 345 0 503 115 0 0 chr10 9036332 9036410 -131280355 + MADE1 DNA Mariner 1 78 -2 441 278 87 76 chr10 9036470 9036948 -131279817 - L2 LINE L2 -224 3089 2581 1981 136 0 14 chr10 9036948 9037274 -131279491 - AluSx SINE Alu 0 322 1 441 278 87 76 chr10 9037274 9037329 -131279436 - L2 LINE L2 -732 2581 2528 2197 119 0 3 chr10 9037336 9037638 -131279127 - AluSq SINE Alu -12 301 1 425 244 15 15 chr10 9037722 9037853 -131278912 + LTR33 LTR ERVL 388 518 -3 249 227 121 0 chr10 9037856 9037922 -131278843 + L2 LINE L2 3199 3272 0 4213 67 5 2 chr10 9038473 9039025 -131277740 + MER41A LTR ERV1 1 554 0 255 61 0 0 chr10 9039524 9039557 -131277208 + (GGAA)n Simple_repeat Simple_repeat 4 36 0 580 188 27 0 chr10 9039643 9039826 -131276939 + L1PA16 LINE L1 5936 6158 -8 23 33 0 0 chr10 9039826 9039856 -131276909 + AT_rich Low_complexity Low_complexity 1 30 0 499 204 10 0 chr10 9040518 9040616 -131276149 - LTR9 LTR ERV1 0 612 514 2870 159 12 55 chr10 9040864 9041442 -131275323 - LTR9 LTR ERV1 -57 555 3 2938 279 63 23 chr10 9042626 9043980 -131272785 + L1ME1 LINE L1 34 1442 -4954 1608 210 108 50 chr10 9044026 9044546 -131272219 - MLT1E1 LTR MaLR -10 644 95 2628 248 76 61 chr10 9044642 9045945 -131270820 + L1ME1 LINE L1 3690 5012 -1203 2193 260 40 12 chr10 9045936 9046727 -131270038 + L1ME1 LINE L1 5347 6223 -12 * 237 270 16 0 chr10 9047052 9047115 -131269650 + L2 LINE L2 3245 3308 -5 297 324 9 9 chr10 9047311 9047416 -131269349 - MIR SINE MIR -39 223 119 5716 136 29 20 chr10 9047446 9047524 -131269241 - L1MA8 LINE L1 0 6291 6215 2158 132 0 0 chr10 9047524 9047827 -131268938 + AluSx SINE Alu 1 303 -9 5716 136 29 20 chr10 9047827 9048848 -131267917 - L1MA8 LINE L1 -76 6215 5183 241 281 52 52 chr10 9050833 9050968 -131265797 - L2 LINE L2 -18 3295 3161 1434 191 44 49 chr10 9051195 9051561 -131265204 + MLT1A1 LTR MaLR 2 365 0 229 171 157 29 chr10 9052013 9052083 -131264682 - L2 LINE L2 -2 3311 3233 24 53 0 0 chr10 9052396 9052434 -131264331 + AT_rich Low_complexity Low_complexity 1 38 0 441 0 0 0 chr10 9052600 9052649 -131264116 + (TG)n Simple_repeat Simple_repeat 2 50 0 198 118 0 0 chr10 9052648 9052682 -131264083 + (TA)n Simple_repeat Simple_repeat 1 34 0 * 245 401 31 0 chr10 9053907 9054025 -131262740 + MIR SINE MIR 46 165 -65 212 328 143 17 chr10 9054040 9054159 -131262606 - MIR SINE MIR -83 179 46 2230 101 3 0 chr10 9054538 9054835 -131261930 + AluSp SINE Alu 1 298 -15 261 83 0 0 chr10 9055424 9055460 -131261305 + (A)n Simple_repeat Simple_repeat 1 36 0 348 24 0 0 chr10 9056297 9056338 -131260427 + (TC)n Simple_repeat Simple_repeat 2 42 0 25 31 0 0 chr10 9056499 9056531 -131260234 + AT_rich Low_complexity Low_complexity 1 32 0 206 32 32 0 chr10 9058416 9058447 -131258318 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 207 0 0 0 chr10 9059490 9059513 -131257252 + (TA)n Simple_repeat Simple_repeat 1 23 0 25 0 0 0 chr10 9059513 9059538 -131257227 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr10 9060259 9060287 -131256478 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr10 9060389 9060425 -131256340 + AT_rich Low_complexity Low_complexity 1 36 0 329 259 89 13 chr10 9061072 9061296 -131255469 + L1M4 LINE L1 2800 3040 -3106 28 48 0 0 chr10 9061411 9061453 -131255312 + AT_rich Low_complexity Low_complexity 1 42 0 405 0 0 0 chr10 9061722 9061767 -131254998 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 2549 61 0 6 chr10 9062183 9062496 -131254269 - AluY SINE Alu 0 311 1 22 0 0 0 chr10 9062507 9062529 -131254236 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr10 9062839 9062861 -131253904 + (A)n Simple_repeat Simple_repeat 1 22 0 24 0 0 0 chr10 9064233 9064257 -131252508 + AT_rich Low_complexity Low_complexity 1 24 0 225 311 11 0 chr10 9064676 9064766 -131251999 + MIR SINE MIR 120 210 -52 626 226 0 8 chr10 9065015 9065139 -131251626 - FLAM_A SINE Alu -10 123 1 227 347 0 14 chr10 9067667 9067739 -131249026 + MIR SINE MIR 78 148 -60 1606 191 3 27 chr10 9068248 9068546 -131248219 + AluJo SINE Alu 1 291 -21 349 223 45 36 chr10 9068572 9068684 -131248081 - MER112 DNA MER1_type -11 249 137 273 269 36 102 chr10 9069298 9069465 -131247300 + MIR SINE MIR 59 214 -48 2008 167 80 82 chr10 9070055 9070570 -131246195 - MLT2B1 LTR ERVL -1 519 6 391 83 0 0 chr10 9070741 9070801 -131245964 - L1MA3 LINE L1 -4 6301 6242 5088 60 0 6 chr10 9071263 9071915 -131244850 + L1PA8 LINE L1 5521 6168 -4 2363 66 0 13 chr10 9072418 9072721 -131244044 - AluY SINE Alu -12 299 1 24 32 0 0 chr10 9072763 9072794 -131243971 + AT_rich Low_complexity Low_complexity 1 31 0 1001 113 251 0 chr10 9072795 9072998 -131243767 - L1MA3 LINE L1 -1 6304 6051 377 320 96 6 chr10 9073913 9074091 -131242674 + MIR SINE MIR 66 259 -3 976 232 122 41 chr10 9076318 9076955 -131239810 - HAL1 LINE L1 -874 1633 945 474 308 180 31 chr10 9076966 9077515 -131239250 - HAL1 LINE L1 -1729 778 148 2848 202 58 68 chr10 9077683 9078564 -131238201 + L1MB5 LINE L1 5294 6165 -9 1846 118 0 4 chr10 9079283 9079528 -131237237 + AluSq SINE Alu 37 280 -33 225 0 0 0 chr10 9079528 9079553 -131237212 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 33 25 0 0 chr10 9079769 9079809 -131236956 + AT_rich Low_complexity Low_complexity 1 40 0 451 370 106 12 chr10 9079916 9080246 -131236519 - L3 LINE CR1 -18 1559 1199 226 385 113 9 chr10 9080326 9080539 -131236226 - L3 LINE CR1 -839 738 504 22 0 0 0 chr10 9080571 9080593 -131236172 + AT_rich Low_complexity Low_complexity 1 22 0 197 357 14 0 chr10 9080828 9080898 -131235867 - MIR3 SINE MIR -49 159 89 344 238 88 103 chr10 9080909 9081170 -131235595 + L1MEc LINE L1 2076 2332 -4064 263 253 98 55 chr10 9081656 9082055 -131234710 + L1MEc LINE L1 2879 3294 -2921 335 318 56 28 chr10 9082460 9082819 -131233946 + L1MEc LINE L1 3808 4176 -2039 201 153 17 34 chr10 9083376 9083435 -131233330 + A-rich Low_complexity Low_complexity 3 60 0 23 54 0 0 chr10 9083689 9083726 -131233039 + AT_rich Low_complexity Low_complexity 1 37 0 226 345 12 24 chr10 9083779 9083863 -131232902 - MIR SINE MIR -89 119 37 2339 163 16 0 chr10 9083943 9084379 -131232386 + L1MA7 LINE L1 5830 6272 -19 1521 104 62 134 chr10 9085869 9086176 -131230589 - AluSx SINE Alu -17 295 11 2017 136 0 0 chr10 9087588 9087895 -131228870 + AluSq SINE Alu 1 307 0 1408 175 0 0 chr10 9088173 9088396 -131228369 - AluSg/x SINE Alu -8 304 82 186 245 21 11 chr10 9088798 9088892 -131227873 + (TA)n Simple_repeat Simple_repeat 1 95 0 318 312 0 37 chr10 9088898 9089007 -131227758 + L1MC4 LINE L1 6614 6718 -1324 270 310 60 40 chr10 9089096 9089243 -131227522 + MIR SINE MIR 33 172 -63 302 250 21 52 chr10 9089338 9089434 -131227331 - MIR3 SINE MIR -35 173 81 437 311 87 78 chr10 9089721 9090299 -131226466 - L2 LINE L2 -546 2768 2186 540 272 29 4 chr10 9090967 9091149 -131225616 + MIR SINE MIR 30 213 -49 230 56 28 0 chr10 9093765 9093801 -131222964 + (TTTTC)n Simple_repeat Simple_repeat 3 39 0 1103 116 12 0 chr10 9093806 9093970 -131222795 - AluSg/x SINE Alu -2 308 143 228 188 0 62 chr10 9094527 9094591 -131222174 + T-rich Low_complexity Low_complexity 1 60 0 180 200 0 0 chr10 9095514 9095554 -131221211 + CT-rich Low_complexity Low_complexity 1 40 0 206 362 32 0 chr10 9095785 9095879 -131220886 + MIR SINE MIR 43 139 -69 7553 23 1 3 chr10 9096419 9097828 -131218937 - L1PA4 LINE L1 -3 6152 4744 533 238 73 6 chr10 9098226 9098390 -131218375 + L1M4 LINE L1 4804 4978 -1168 23 33 0 0 chr10 9098758 9098788 -131217977 + AT_rich Low_complexity Low_complexity 1 30 0 33 25 0 0 chr10 9098869 9098909 -131217856 + AT_rich Low_complexity Low_complexity 1 40 0 40 21 0 0 chr10 9099122 9099169 -131217596 + AT_rich Low_complexity Low_complexity 1 47 0 220 205 0 0 chr10 9100404 9100443 -131216322 + CT-rich Low_complexity Low_complexity 3 41 0 320 229 83 28 chr10 9101229 9101338 -131215427 + MIR SINE MIR 30 144 -118 9358 34 16 138 chr10 9101450 9102909 -131213856 + SVA Other Other 15 1296 -90 2565 195 16 56 chr10 9103057 9103918 -131212847 + L1 LINE L1 4416 5242 -904 1588 147 4 0 chr10 9104241 9104479 -131212286 + AluSg/x SINE Alu 74 312 0 854 177 40 17 chr10 9104521 9104696 -131212069 + MER1B DNA MER1_type 107 285 -54 434 33 16 0 chr10 9104681 9104742 -131212023 + MER41A LTR ERV1 403 464 -90 * 430 16 0 0 chr10 9105566 9105628 -131211137 + AluY SINE Alu 249 310 0 437 237 108 21 chr10 9107486 9107680 -131209085 - L1MC4 LINE L1 -2 8040 7830 1001 161 28 0 chr10 9108974 9109154 -131207611 + MER5A DNA MER1_type 5 189 0 439 290 167 5 chr10 9112949 9113135 -131203630 - MIR SINE MIR 0 262 47 683 259 52 4 chr10 9114089 9114321 -131202444 + L1MEc LINE L1 36 278 -6118 1214 190 51 63 chr10 9115472 9115867 -131200898 + MLT1B LTR MaLR 1 390 0 250 188 12 35 chr10 9116707 9116831 -131199934 + (TTTA)n Simple_repeat Simple_repeat 1 121 0 26 50 0 0 chr10 9116912 9116952 -131199813 + AT_rich Low_complexity Low_complexity 1 40 0 975 94 22 22 chr10 9117197 9117378 -131199387 + SVA Other Other 687 867 -519 6283 59 30 56 chr10 9117390 9118376 -131198389 + SVA Other Other 430 1390 0 236 304 43 0 chr10 9118950 9119019 -131197746 + MIR SINE MIR 31 102 -106 263 109 0 22 chr10 9119302 9119348 -131197417 - L1PA8 LINE L1 -12 6160 6116 2176 55 0 0 chr10 9119308 9119579 -131197186 - L1PA5 LINE L1 -17 6137 5867 23 0 0 0 chr10 9119597 9119620 -131197145 + AT_rich Low_complexity Low_complexity 1 23 0 2378 102 6 0 chr10 9120481 9120823 -131195942 - L1PA13 LINE L1 -2 6161 5818 210 145 0 48 chr10 9120942 9121004 -131195761 + (TAAAAA)n Simple_repeat Simple_repeat 1 59 0 344 0 71 0 chr10 9123439 9123495 -131193270 + (TG)n Simple_repeat Simple_repeat 2 61 0 285 75 0 0 chr10 9125326 9125366 -131191399 + (CA)n Simple_repeat Simple_repeat 1 40 0 984 268 32 52 chr10 9126555 9126958 -131189807 - MLT2C1 LTR ERVL -2 395 1 911 154 0 30 chr10 9127306 9127475 -131189290 + FRAM SINE Alu 1 164 -2 233 234 182 0 chr10 9127627 9127704 -131189061 - L1MA10 LINE L1 -8 6326 6236 2541 240 56 34 chr10 9127717 9129361 -131187404 - L1ME1 LINE L1 -117 6118 4443 1122 270 41 34 chr10 9129397 9129838 -131186927 + L1MCb LINE L1 1 444 -5601 776 267 49 4 chr10 9129837 9130084 -131186681 - L1ME1 LINE L1 -6103 293 36 * 21 57 0 0 chr10 9130447 9130482 -131186283 + AT_rich Low_complexity Low_complexity 1 35 0 206 407 47 0 chr10 9130504 9130590 -131186175 + L2 LINE L2 3140 3229 -43 2018 133 0 3 chr10 9130617 9130910 -131185855 - AluSx SINE Alu -7 305 14 23 33 0 0 chr10 9132410 9132440 -131184325 + AT_rich Low_complexity Low_complexity 1 30 0 333 268 114 24 chr10 9132542 9132665 -131184100 - L2 LINE L2 -4 3309 3176 206 208 47 104 chr10 9132725 9132831 -131183934 - L2 LINE L2 0 3313 3214 778 234 38 28 chr10 9133043 9133260 -131183505 - MLT2B2 LTR ERVL 0 515 250 688 192 68 64 chr10 9133260 9133522 -131183243 + L1MC3 LINE L1 2335 2641 -3966 2037 122 3 7 chr10 9133522 9133818 -131182947 + AluSc SINE Alu 1 295 -14 688 192 68 64 chr10 9133818 9133913 -131182852 + L1MC3 LINE L1 2641 2734 -3873 186 118 0 0 chr10 9133921 9133955 -131182810 + (TAAAAA)n Simple_repeat Simple_repeat 2 35 0 1365 221 18 49 chr10 9133955 9134443 -131182322 + L1MC3 LINE L1 3074 3546 -2880 * 10090 212 41 37 chr10 9134432 9138508 -131178257 + L1MC3 LINE L1 3969 8057 -8 1670 124 4 4 chr10 9138900 9139142 -131177623 + AluSc SINE Alu 1 242 -67 2196 216 17 4 chr10 9139382 9139854 -131176911 - MER66A LTR ERV1 0 478 1 1799 139 33 0 chr10 9140925 9141198 -131175567 - AluSx SINE Alu -28 284 3 379 262 122 67 chr10 9142013 9142177 -131174588 - MLT1J2 LTR MaLR -240 210 38 371 403 35 30 chr10 9142554 9142785 -131173980 - MIR SINE MIR -21 241 10 283 243 14 29 chr10 9143116 9143186 -131173579 - L2 LINE L2 -1 3312 3244 1594 110 27 11 chr10 9143381 9143644 -131173121 - L1PA13 LINE L1 -4 6159 5893 280 243 57 0 chr10 9143983 9144053 -131172712 + MIR SINE MIR 56 129 -79 1386 111 9 18 chr10 9144507 9144732 -131172033 + L1PA10 LINE L1 5942 6164 -4 5085 135 11 7 chr10 9145224 9146052 -131170713 - L1PA16 LINE L1 -10 6156 5326 212 0 36 0 chr10 9146180 9146208 -131170557 + (TATAA)n Simple_repeat Simple_repeat 4 32 0 2150 87 0 17 chr10 9148072 9148359 -131168406 - AluSg SINE Alu -28 282 1 489 279 16 0 chr10 9148360 9148482 -131168283 + MIR SINE MIR 63 186 -76 234 339 101 9 chr10 9148581 9148690 -131168075 + L2 LINE L2 3148 3266 -6 22 0 0 0 chr10 9149191 9149213 -131167552 + AT_rich Low_complexity Low_complexity 1 22 0 257 313 81 0 chr10 9149641 9149740 -131167025 + L2 LINE L2 3200 3306 -7 1797 222 76 40 chr10 9149888 9150053 -131166712 - L1MC4 LINE L1 -178 7864 7706 1687 170 0 42 chr10 9150053 9150359 -131166406 - AluJo SINE Alu -17 295 3 1797 222 76 40 chr10 9150359 9150770 -131165995 - L1MC4 LINE L1 -336 7706 7267 399 232 1 24 chr10 9150785 9150885 -131165880 - L1MC4 LINE L1 -720 7293 7183 45 62 0 0 chr10 9151202 9151282 -131165483 + AT_rich Low_complexity Low_complexity 1 80 0 22 35 0 0 chr10 9153328 9153357 -131163408 + AT_rich Low_complexity Low_complexity 1 29 0 3147 52 7 7 chr10 9154222 9154629 -131162136 + L1PA7 LINE L1 5737 6143 -11 22 56 0 0 chr10 9154629 9154665 -131162100 + AT_rich Low_complexity Low_complexity 1 36 0 256 326 56 11 chr10 9155223 9155312 -131161453 - L2 LINE L2 0 3272 3180 226 326 81 0 chr10 9155435 9155521 -131161244 + L2 LINE L2 3220 3312 -1 1886 95 56 0 chr10 9156532 9156817 -131159948 + L1PA10 LINE L1 5863 6163 -5 279 324 0 0 chr10 9157461 9157529 -131159236 - L2 LINE L2 0 3313 3246 21 57 0 0 chr10 9158364 9158399 -131158366 + AT_rich Low_complexity Low_complexity 1 35 0 207 0 0 0 chr10 9160327 9160350 -131156415 + (CA)n Simple_repeat Simple_repeat 2 24 0 26 64 0 0 chr10 9161347 9161394 -131155371 + AT_rich Low_complexity Low_complexity 1 47 0 1595 166 0 11 chr10 9161416 9161730 -131155035 - AluJb SINE Alu 0 327 17 991 164 36 41 chr10 9162396 9162615 -131154150 - AluJo SINE Alu -9 303 86 2266 233 34 12 chr10 9162774 9163370 -131153395 - L1MC4a LINE L1 -155 7653 7045 231 36 0 0 chr10 9163384 9163412 -131153353 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 2242 26 7 0 chr10 9163472 9163742 -131153023 - L1PA4 LINE L1 -3 6152 5881 857 236 107 23 chr10 9164373 9164921 -131151844 + L1MD2 LINE L1 5528 6161 -5 2910 156 20 0 chr10 9164943 9165444 -131151321 + L1PB4 LINE L1 5639 6149 -7 352 281 59 39 chr10 9165738 9165891 -131150874 - L2 LINE L2 0 3313 3158 1992 122 95 12 chr10 9166172 9166508 -131150257 + THE1B LTR MaLR 1 364 0 1413 186 80 0 chr10 9166560 9166848 -131149917 - AluJb SINE Alu 0 309 1 330 298 108 25 chr10 9166848 9167006 -131149759 + MIR SINE MIR 35 205 -57 311 222 32 0 chr10 9167573 9167636 -131149129 - L2 LINE L2 0 3313 3249 285 310 85 101 chr10 9167742 9168000 -131148765 - L2 LINE L2 -5 3267 3014 1065 151 0 0 chr10 9168466 9168632 -131148133 - AluSg/x SINE Alu -2 310 145 2330 73 0 3 chr10 9168841 9169141 -131147624 - AluSc SINE Alu -9 300 2 497 237 21 156 chr10 9169376 9169659 -131147106 - MIR SINE MIR -2 260 16 194 269 118 32 chr10 9170866 9170959 -131145806 - MIR SINE MIR 0 262 162 238 318 15 0 chr10 9172121 9172187 -131144578 - L2 LINE L2 -1 3271 3205 2116 125 42 28 chr10 9172212 9172571 -131144194 - THE1B LTR MaLR 0 364 1 376 233 41 34 chr10 9172783 9173033 -131143732 + MLT1H1 LTR MaLR 120 376 -214 186 337 105 0 chr10 9173222 9173317 -131143448 + MIR SINE MIR 71 175 -87 870 184 38 160 chr10 9173363 9173463 -131143302 + MER33 DNA MER1_type 1 112 -2473 1935 144 9 3 chr10 9173463 9173803 -131142962 + L1MA2 LINE L1 5963 6304 0 870 184 38 160 chr10 9173803 9174071 -131142694 + MER33 DNA MER1_type 112 324 0 4105 132 9 0 chr10 9174177 9174829 -131141936 - L1MA2 LINE L1 -15 6289 5632 1675 97 132 8 chr10 9175029 9175287 -131141478 - AluSx SINE Alu -22 290 1 22 99 0 0 chr10 9175926 9175997 -131140768 + AT_rich Low_complexity Low_complexity 1 71 0 225 159 0 0 chr10 9177621 9177665 -131139100 + (TG)n Simple_repeat Simple_repeat 2 45 0 293 186 29 43 chr10 9177857 9177927 -131138838 - L1ME4a LINE L1 -69 6052 5984 746 334 97 45 chr10 9178156 9178662 -131138103 - L2 LINE L2 -31 3282 2804 1647 167 7 33 chr10 9178662 9178968 -131137797 - AluJo SINE Alu -13 299 2 746 334 97 45 chr10 9178968 9179243 -131137522 - L2 LINE L2 -509 2804 2451 1255 175 54 35 chr10 9179243 9179557 -131137208 - MER33 DNA MER1_type 0 324 5 746 334 97 45 chr10 9179557 9179733 -131137032 - L2 LINE L2 -862 2451 2286 328 315 68 25 chr10 9179737 9180058 -131136707 - L1ME4a LINE L1 -304 5817 5483 269 377 51 55 chr10 9180900 9181391 -131135374 - L2 LINE L2 -340 2974 2486 389 161 11 0 chr10 9181752 9181839 -131134926 + (TAGA)n Simple_repeat Simple_repeat 3 90 0 1301 197 38 112 chr10 9182106 9182527 -131134238 - MLT1B LTR MaLR 0 390 1 2075 109 0 3 chr10 9182533 9182836 -131133929 + AluSq SINE Alu 1 302 0 314 274 9 19 chr10 9182853 9182959 -131133806 + (TATATG)n Simple_repeat Simple_repeat 2 106 0 780 103 46 17 chr10 9183520 9183695 -131133070 + CT-rich Low_complexity Low_complexity 1 180 0 2055 108 16 10 chr10 9183708 9184014 -131132751 - AluSg SINE Alu -1 309 2 2865 240 68 48 chr10 9184060 9184111 -131132654 - L1ME1 LINE L1 -5 6161 6113 1176 183 99 56 chr10 9184111 9184433 -131132332 - MER44D DNA MER2_type -2 607 2 2865 240 68 48 chr10 9184433 9185822 -131130943 - L1ME1 LINE L1 -53 6113 4687 195 360 114 0 chr10 9185839 9185953 -131130812 - MIR SINE MIR -26 236 110 4914 236 50 50 chr10 9185986 9188166 -131128599 + L1MDa LINE L1 889 3158 -3382 4045 167 6 4 chr10 9188166 9188868 -131127897 - L1PA16 LINE L1 -1 6165 5463 4914 236 50 50 chr10 9188868 9190009 -131126756 + L1MDa LINE L1 3158 4297 -2243 1385 148 4 18 chr10 9190009 9190238 -131126527 - AluJb SINE Alu -86 226 1 1016 246 54 22 chr10 9190265 9190542 -131126223 + L1MDa LINE L1 4346 4631 -1909 498 146 64 27 chr10 9190551 9190661 -131126104 + L1MD2 LINE L1 6246 6359 0 496 44 0 0 chr10 9190679 9190768 -131125997 + L1PA3 LINE L1 6087 6175 0 25 83 0 0 chr10 9191234 9191294 -131125471 + AT_rich Low_complexity Low_complexity 1 60 0 263 323 31 8 chr10 9191330 9191460 -131125305 + L1MEc LINE L1 70 202 -6194 349 329 40 22 chr10 9191798 9192026 -131124739 + L1MEc LINE L1 638 869 -5527 210 71 0 0 chr10 9192192 9192220 -131124545 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 883 318 112 33 chr10 9192619 9193191 -131123574 - L2 LINE L2 -577 2737 2121 2680 186 40 20 chr10 9193645 9194252 -131122513 - L1 LINE L1 -1902 4244 3626 438 250 35 0 chr10 9195758 9195874 -131120891 - MER94 DNA DNA -12 122 3 2866 130 77 83 chr10 9195933 9196572 -131120193 + MER41B LTR ERV1 1 635 0 23 0 0 0 chr10 9197808 9197831 -131118934 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr10 9198952 9198977 -131117788 + AT_rich Low_complexity Low_complexity 1 25 0 951 88 15 0 chr10 9199006 9199143 -131117622 - L1PB2 LINE L1 -7 6144 6006 1511 182 19 4 chr10 9199143 9199407 -131117358 - AluJb SINE Alu -44 268 1 403 348 82 16 chr10 9200198 9200442 -131116323 - MIR SINE MIR 0 262 3 303 28 0 0 chr10 9201843 9201879 -131114886 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 22 35 0 0 chr10 9202680 9202709 -131114056 + AT_rich Low_complexity Low_complexity 1 29 0 4960 79 138 18 chr10 9203008 9203203 -131113562 + L1PA10 LINE L1 5298 5468 -700 2112 128 3 0 chr10 9203203 9203499 -131113266 + AluSq SINE Alu 1 297 -16 4960 79 138 18 chr10 9203499 9204079 -131112686 + L1PA10 LINE L1 5468 6166 -2 212 200 22 0 chr10 9204297 9204342 -131112423 + A-rich Low_complexity Low_complexity 5 50 0 207 213 21 21 chr10 9204556 9204603 -131112162 - L2 LINE L2 -2 3311 3265 423 202 0 0 chr10 9204978 9205087 -131111678 + (CA)n Simple_repeat Simple_repeat 2 110 0 1239 241 116 7 chr10 9205539 9205953 -131110812 - MLT1C LTR MaLR -8 459 1 858 88 0 0 chr10 9206528 9206687 -131110078 - L1PA8 LINE L1 -11 6161 6027 1750 131 53 3 chr10 9206790 9206915 -131109850 + AluSx SINE Alu 1 118 -194 459 0 0 0 chr10 9206915 9206966 -131109799 + (CA)n Simple_repeat Simple_repeat 2 52 0 1750 131 53 3 chr10 9206966 9207122 -131109643 + AluSx SINE Alu 118 296 -16 396 286 127 45 chr10 9207181 9207426 -131109339 + L1ME LINE L1 5408 5672 -449 247 211 0 0 chr10 9207490 9207542 -131109223 + L1ME LINE L1 5757 5808 -356 468 197 0 63 chr10 9207703 9207830 -131108935 + L1ME1 LINE L1 4562 4680 -1466 2010 135 0 3 chr10 9207913 9208250 -131108515 + AluSq SINE Alu 1 313 0 242 240 80 0 chr10 9208496 9208596 -131108169 + L1ME1 LINE L1 5122 5229 -917 391 317 88 4 chr10 9208615 9208877 -131107888 + L1M2 LINE L1 5256 5539 -761 383 256 74 17 chr10 9208873 9209049 -131107716 + L1ME1 LINE L1 5711 5896 -274 * 1061 228 26 98 chr10 9209083 9209469 -131107296 - MLT1A2 LTR MaLR -16 358 1 6394 89 4 2 chr10 9211194 9212219 -131104546 + L1PA14 LINE L1 5121 6156 -5 22 0 0 0 chr10 9212225 9212247 -131104518 + AT_rich Low_complexity Low_complexity 1 22 0 324 269 53 58 chr10 9212465 9212636 -131104129 + MLT1J2 LTR MaLR 280 449 -1 286 369 114 23 chr10 9212683 9212946 -131103819 + L3 LINE CR1 68 354 -1223 233 325 117 8 chr10 9213254 9213374 -131103391 - MIR SINE MIR -129 133 1 1786 296 143 11 chr10 9213971 9214687 -131102078 - L2 LINE L2 -446 2868 2059 21 0 0 0 chr10 9215051 9215072 -131101693 + AT_rich Low_complexity Low_complexity 1 21 0 1497 122 0 14 chr10 9216771 9216985 -131099780 - AluSg SINE Alu -99 211 1 24 53 0 0 chr10 9216992 9217030 -131099735 + AT_rich Low_complexity Low_complexity 1 38 0 180 313 91 40 chr10 9217041 9217140 -131099625 - L3b LINE CR1 -189 1394 1291 545 288 9 39 chr10 9217221 9217285 -131099480 + L1ME1 LINE L1 5919 5983 -183 2249 146 5 19 chr10 9217285 9217654 -131099111 - THE1B LTR MaLR 0 364 1 545 288 9 39 chr10 9217654 9217822 -131098943 + L1ME1 LINE L1 5983 6144 -22 247 215 9 28 chr10 9217838 9217945 -131098820 + (TA)n Simple_repeat Simple_repeat 2 106 0 384 302 145 35 chr10 9218405 9218660 -131098105 + MLT1I LTR MaLR 21 303 -106 1346 278 16 5 chr10 9218669 9219051 -131097714 - L2 LINE L2 -693 2621 2236 632 325 43 9 chr10 9222028 9222259 -131094506 + MIR SINE MIR 24 262 0 2079 143 0 6 chr10 9222383 9222697 -131094068 - AluSx SINE Alu 0 312 1 186 71 0 0 chr10 9222824 9222852 -131093913 + (TA)n Simple_repeat Simple_repeat 1 28 0 180 0 0 0 chr10 9222997 9223017 -131093748 + (TG)n Simple_repeat Simple_repeat 2 21 0 2089 138 0 0 chr10 9223364 9223655 -131093110 - AluSx SINE Alu -20 292 2 524 154 24 49 chr10 9223936 9224059 -131092706 - L1MC2 LINE L1 0 6344 6225 466 284 100 15 chr10 9224390 9224661 -131092104 + LTR33A LTR ERVL 230 523 0 261 0 0 0 chr10 9224710 9224739 -131092026 + (A)n Simple_repeat Simple_repeat 1 29 0 306 254 56 63 chr10 9225268 9225394 -131091371 + L2 LINE L2 3189 3313 0 789 205 0 26 chr10 9225538 9225694 -131091071 + FRAM SINE Alu 1 152 -24 22 0 0 0 chr10 9226650 9226672 -131090093 + AT_rich Low_complexity Low_complexity 1 22 0 308 240 124 41 chr10 9228152 9228273 -131088492 - MIR SINE MIR -62 200 70 216 354 0 76 chr10 9228318 9228462 -131088303 + L2 LINE L2 3139 3271 -1 734 172 0 51 chr10 9229589 9229746 -131087019 + AluJo SINE Alu 39 187 -125 194 105 26 0 chr10 9230740 9230778 -131085987 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 2089 124 0 3 chr10 9230999 9231289 -131085476 - AluSg SINE Alu -21 289 1 5009 32 0 0 chr10 9232058 9232656 -131084109 - L1PA3 LINE L1 -1046 5100 4503 7835 14 0 0 chr10 9232656 9233680 -131083085 + L1PA3 LINE L1 5132 6155 0 626 37 86 12 chr10 9233865 9234020 -131082745 + (TA)n Simple_repeat Simple_repeat 1 170 -4 1712 161 4 18 chr10 9234020 9234299 -131082466 - AluJb SINE Alu -37 275 1 626 37 86 12 chr10 9234299 9234305 -131082460 + (TA)n Simple_repeat Simple_repeat 170 174 0 25 51 0 0 chr10 9236897 9236936 -131079829 + AT_rich Low_complexity Low_complexity 1 39 0 201 211 0 0 chr10 9237299 9237351 -131079414 + GA-rich Low_complexity Low_complexity 2 53 0 380 111 44 0 chr10 9237985 9238075 -131078690 + (TA)n Simple_repeat Simple_repeat 1 94 0 241 295 62 36 chr10 9238198 9238310 -131078455 - MIR SINE MIR -48 214 100 29 0 0 0 chr10 9239608 9239637 -131077128 + AT_rich Low_complexity Low_complexity 1 29 0 2601 161 9 17 chr10 9240096 9240562 -131076203 + MLT1C LTR MaLR 1 462 -5 181 296 0 0 chr10 9240905 9240949 -131075816 + MIR3 SINE MIR 116 159 -49 392 0 21 0 chr10 9241241 9241289 -131075476 + (TG)n Simple_repeat Simple_repeat 2 50 0 3001 196 41 17 chr10 9241331 9241983 -131074782 - L1MD1 LINE L1 0 6242 5575 442 266 62 0 chr10 9241984 9242112 -131074653 + L1MD1 LINE L1 5408 5543 -699 2633 226 41 22 chr10 9242261 9242902 -131073863 - MER82 DNA MER2_type 0 653 1 245 218 18 0 chr10 9243071 9243126 -131073639 - L1MC/D LINE L1 -514 5845 5790 2331 83 0 10 chr10 9243175 9243477 -131073288 + AluY SINE Alu 1 299 -12 256 284 12 0 chr10 9245857 9245938 -131070827 + MIR3 SINE MIR 125 206 -2 234 233 0 0 chr10 9246146 9246206 -131070559 + CT-rich Low_complexity Low_complexity 2 61 0 270 294 29 0 chr10 9246213 9246281 -131070484 - L2 LINE L2 -17 3255 3186 2120 122 0 0 chr10 9246305 9246593 -131070172 - AluSx SINE Alu -24 288 1 475 355 59 16 chr10 9246735 9247107 -131069658 - L2 LINE L2 -455 2859 2472 355 312 18 59 chr10 9248243 9248413 -131068352 + L3 LINE CR1 854 1016 -561 1900 139 20 0 chr10 9248663 9248964 -131067801 + AluSx SINE Alu 1 307 -5 21 0 0 0 chr10 9249338 9249359 -131067406 + AT_rich Low_complexity Low_complexity 1 21 0 2300 50 4 4 chr10 9249791 9250070 -131066695 + AluY SINE Alu 1 279 -32 308 24 0 24 chr10 9250071 9250113 -131066652 + (GAAAA)n Simple_repeat Simple_repeat 2 42 0 240 183 73 73 chr10 9250117 9250199 -131066566 - L2 LINE L2 -12 3260 3179 229 70 23 0 chr10 9250217 9250260 -131066505 - Alu SINE Alu 0 300 257 1180 256 61 28 chr10 9250687 9251148 -131065617 + L1M4 LINE L1 2281 2756 -3390 3961 176 6 6 chr10 9251180 9251877 -131064888 - L1PA16 LINE L1 -7 6159 5463 2523 245 52 50 chr10 9251875 9253017 -131063748 + L1M4 LINE L1 2759 3903 -2243 * 1408 148 4 18 chr10 9253017 9253246 -131063519 - AluJb SINE Alu -86 226 1 697 233 24 38 chr10 9253272 9253482 -131063283 + L1M4 LINE L1 3950 4156 -1990 306 185 25 37 chr10 9253559 9253640 -131063125 + L1MD2 LINE L1 6246 6325 -34 405 0 0 0 chr10 9253994 9254039 -131062726 + (TG)n Simple_repeat Simple_repeat 1 45 0 2296 69 10 0 chr10 9254135 9254424 -131062341 - AluY SINE Alu -15 296 5 26 50 0 0 chr10 9254438 9254478 -131062287 + AT_rich Low_complexity Low_complexity 1 40 0 201 288 0 17 chr10 9254626 9254685 -131062080 + CT-rich Low_complexity Low_complexity 4 61 0 34 24 0 0 chr10 9254698 9254739 -131062026 + AT_rich Low_complexity Low_complexity 1 41 0 23 0 0 0 chr10 9257917 9257940 -131058825 + AT_rich Low_complexity Low_complexity 1 23 0 306 290 113 8 chr10 9258458 9258582 -131058183 + L2 LINE L2 3173 3309 -4 28 29 0 0 chr10 9259002 9259037 -131057728 + AT_rich Low_complexity Low_complexity 1 35 0 407 259 69 8 chr10 9259227 9259358 -131057407 + MIR SINE MIR 124 262 0 297 0 0 0 chr10 9259562 9259595 -131057170 + (TA)n Simple_repeat Simple_repeat 2 34 0 * 336 24 0 0 chr10 9259594 9259635 -131057130 + (GA)n Simple_repeat Simple_repeat 2 42 0 2207 116 3 3 chr10 9260843 9261153 -131055612 - AluSx SINE Alu 0 312 3 297 0 0 0 chr10 9261834 9261867 -131054898 + (CA)n Simple_repeat Simple_repeat 2 34 0 23 33 0 0 chr10 9262481 9262511 -131054254 + AT_rich Low_complexity Low_complexity 1 30 0 1017 185 0 0 chr10 9262894 9263072 -131053693 - AluJb SINE Alu -5 307 130 239 164 36 0 chr10 9263770 9263825 -131052940 + GA-rich Low_complexity Low_complexity 2 58 0 182 356 58 0 chr10 9263917 9264004 -131052761 + MIR3 SINE MIR 87 178 -30 21 0 0 0 chr10 9265264 9265285 -131051480 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 9267011 9267039 -131049726 + AT_rich Low_complexity Low_complexity 1 28 0 216 319 124 0 chr10 9268598 9268711 -131048054 + MIR SINE MIR 20 146 -62 21 57 0 0 chr10 9271272 9271307 -131045458 + AT_rich Low_complexity Low_complexity 1 35 0 243 0 0 0 chr10 9272264 9272291 -131044474 + (A)n Simple_repeat Simple_repeat 1 27 0 273 57 0 0 chr10 9272532 9272567 -131044198 + (TC)n Simple_repeat Simple_repeat 2 36 0 321 26 0 0 chr10 9272567 9272605 -131044160 + (CA)n Simple_repeat Simple_repeat 1 38 0 27 0 0 0 chr10 9272605 9272632 -131044133 + AT_rich Low_complexity Low_complexity 1 27 0 453 307 52 52 chr10 9273399 9273611 -131043154 + MIR SINE MIR 15 226 -36 21 36 0 0 chr10 9273931 9273959 -131042806 + AT_rich Low_complexity Low_complexity 1 28 0 642 299 49 47 chr10 9276502 9276867 -131039898 - L1MC/D LINE L1 -2099 5709 5344 336 306 47 57 chr10 9276899 9277092 -131039673 - MIR SINE MIR -70 192 2 22 0 0 0 chr10 9277127 9277149 -131039616 + AT_rich Low_complexity Low_complexity 1 22 0 237 325 65 0 chr10 9277173 9277250 -131039515 - L2 LINE L2 -3 3310 3229 241 194 30 30 chr10 9278041 9278108 -131038657 + MER116 DNA Mariner 1 67 -13 1768 100 0 0 chr10 9278315 9278546 -131038219 + AluSx SINE Alu 1 231 -81 590 99 41 8 chr10 9278574 9278695 -131038070 + GA-rich Low_complexity Low_complexity 4 128 0 31 44 0 0 chr10 9278841 9278886 -131037879 + AT_rich Low_complexity Low_complexity 1 45 0 305 340 77 19 chr10 9279355 9279511 -131037254 + MIR SINE MIR 57 221 -41 27 49 0 0 chr10 9280852 9280893 -131035872 + AT_rich Low_complexity Low_complexity 1 41 0 180 0 0 0 chr10 9280969 9280989 -131035776 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 960 43 0 0 chr10 9280991 9281107 -131035658 - AluY SINE Alu -31 280 165 204 234 0 43 chr10 9281757 9281804 -131034961 + polypyrimidine Low_complexity Low_complexity 4 48 0 1134 261 23 3 chr10 9281881 9282180 -131034585 - L1MC/D LINE L1 -986 5160 4856 2073 192 34 9 chr10 9282192 9282734 -131034031 + L1MA9 LINE L1 4886 5436 -743 1069 148 99 0 chr10 9282737 9282939 -131033826 + L1MA6 LINE L1 6073 6294 -6 3776 145 72 65 chr10 9283029 9283773 -131032992 + L1MA9 LINE L1 5417 6169 -143 360 0 0 0 chr10 9283773 9283813 -131032952 + (CA)n Simple_repeat Simple_repeat 1 40 0 3776 145 72 65 chr10 9283813 9283938 -131032827 + L1MA9 LINE L1 6169 6292 -20 25 31 0 0 chr10 9283954 9283986 -131032779 + AT_rich Low_complexity Low_complexity 1 32 0 518 281 63 53 chr10 9284024 9284340 -131032425 + MER34 LTR ERV1 9 530 -177 5056 178 73 57 chr10 9284340 9284869 -131031896 + L1MCa LINE L1 281 800 -5626 270 0 0 0 chr10 9284869 9284899 -131031866 + (CAA)n Simple_repeat Simple_repeat 1 30 0 5056 178 73 57 chr10 9284899 9284924 -131031841 + L1MCa LINE L1 800 823 -5603 303 28 0 0 chr10 9284924 9284960 -131031805 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 5056 178 73 57 chr10 9284960 9285657 -131031108 + L1MCa LINE L1 823 1553 -4873 887 241 4 9 chr10 9285649 9285877 -131030888 + L1M4 LINE L1 3909 4135 -2011 * 254 226 97 0 chr10 9287070 9287132 -131029633 - MER63 DNA MER1_type -16 1045 978 264 219 14 41 chr10 9287291 9287364 -131029401 - MER103 DNA DNA -79 87 17 671 296 43 17 chr10 9287407 9287640 -131029125 + MIR SINE MIR 11 249 -13 446 298 60 38 chr10 9288486 9288885 -131027880 + L1ME LINE L1 534 941 -5129 * 1121 241 46 20 chr10 9288883 9289339 -131027426 + L1ME LINE L1 2793 3260 -2820 847 265 58 0 chr10 9289392 9289649 -131027116 + L1ME LINE L1 3537 3808 -2272 1755 215 35 8 chr10 9290946 9291323 -131025442 - MLT1B LTR MaLR 0 390 4 370 264 0 0 chr10 9291853 9291940 -131024825 - L2 LINE L2 0 3272 3186 666 311 104 32 chr10 9292604 9293248 -131023517 + L2 LINE L2 2549 3206 -107 205 169 26 65 chr10 9296035 9296112 -131020653 + CT-rich Low_complexity Low_complexity 5 78 0 5370 172 29 18 chr10 9296351 9297697 -131019068 - L1PA16 LINE L1 -10 6156 4778 1463 209 14 3 chr10 9297697 9297993 -131018772 - AluJb SINE Alu -8 304 6 5370 172 29 18 chr10 9297993 9298491 -131018274 - L1PA16 LINE L1 -1388 4778 4287 21 0 0 0 chr10 9298617 9298638 -131018127 + AT_rich Low_complexity Low_complexity 1 21 0 440 326 73 22 chr10 9298668 9298981 -131017784 + L1MC4a LINE L1 5583 5911 -1897 329 302 135 75 chr10 9299169 9299241 -131017524 + HAL1 LINE L1 4 70 -2437 1652 241 39 22 chr10 9299241 9299735 -131017030 - MLT1D LTR MaLR 0 505 4 329 302 135 75 chr10 9299735 9300033 -131016732 + HAL1 LINE L1 70 396 -2111 999 192 35 13 chr10 9300057 9300286 -131016479 - L1 LINE L1 -1478 4668 4435 4689 183 32 34 chr10 9300853 9302727 -131014038 + L1MA9 LINE L1 4436 6310 -2 22 0 0 0 chr10 9302835 9302857 -131013908 + AT_rich Low_complexity Low_complexity 1 22 0 568 274 129 35 chr10 9303089 9303548 -131013217 + L2 LINE L2 2631 3133 -180 292 343 10 18 chr10 9303662 9303820 -131012945 - MIR SINE MIR -23 185 31 1886 253 92 29 chr10 9303946 9304245 -131012520 - L1ME1 LINE L1 -63 6172 5893 3153 136 10 0 chr10 9304245 9304737 -131012028 - LOR1a LTR ERV1 0 497 1 1886 253 92 29 chr10 9304737 9305207 -131011558 - L1ME1 LINE L1 -342 5893 5354 23 0 0 0 chr10 9305241 9305264 -131011501 + AT_rich Low_complexity Low_complexity 1 23 0 1344 243 147 16 chr10 9305280 9305925 -131010840 - L1ME1 LINE L1 -872 5343 4614 1264 266 55 9 chr10 9305926 9306384 -131010381 - L1ME1 LINE L1 -2120 4095 3617 237 171 86 14 chr10 9306383 9306453 -131010312 - L1M4 LINE L1 -355 5823 5749 * 347 176 83 46 chr10 9306562 9306670 -131010095 - L1ME1 LINE L1 -2904 3311 3200 21 57 0 0 chr10 9306756 9306791 -131009974 + AT_rich Low_complexity Low_complexity 1 35 0 640 230 15 31 chr10 9306803 9306999 -131009766 - L1ME1 LINE L1 -4628 1768 1576 244 180 0 33 chr10 9306996 9307057 -131009708 - L1MA10 LINE L1 -2 6332 6274 * 3671 181 53 16 chr10 9307053 9307344 -131009421 - L1MA9 LINE L1 -224 6088 5809 387 0 0 0 chr10 9307344 9307387 -131009378 + (TA)n Simple_repeat Simple_repeat 2 44 0 3671 181 53 16 chr10 9307387 9307683 -131009082 - L1MA9 LINE L1 -503 5809 5525 198 0 0 0 chr10 9307683 9307705 -131009060 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 3671 181 53 16 chr10 9307705 9307944 -131008821 - L1MA9 LINE L1 -787 5525 5231 674 171 6 57 chr10 9307942 9308117 -131008648 + L1 LINE L1 4553 4718 -1428 * 650 228 40 61 chr10 9308117 9308345 -131008420 + pTR5 LTR ERV1 743 965 -1473 4540 105 46 75 chr10 9308424 9309275 -131007490 + LTR12 LTR ERV1 1 826 0 1022 153 20 44 chr10 9309275 9309478 -131007287 + L1 LINE L1 4715 4912 -1234 2084 112 3 26 chr10 9309631 9309944 -131006821 - AluSx SINE Alu -6 306 1 334 294 176 78 chr10 9310074 9310088 -131006677 + L2 LINE L2 2306 2317 -997 1025 262 62 53 chr10 9310088 9310538 -131006227 + LTR16A1 LTR ERVL 1 454 -3 334 294 176 78 chr10 9310538 9310870 -131005895 + L2 LINE L2 2317 2686 -628 884 44 0 0 chr10 9311117 9311231 -131005534 + L1PA6 LINE L1 6041 6154 0 678 190 0 8 chr10 9311362 9311483 -131005282 - FLAM_C SINE Alu -17 126 7 21 57 0 0 chr10 9311575 9311610 -131005155 + AT_rich Low_complexity Low_complexity 1 35 0 220 269 0 0 chr10 9314172 9314224 -131002541 + (CA)n Simple_repeat Simple_repeat 2 53 0 2256 89 7 0 chr10 9314816 9315108 -131001657 + AluSc SINE Alu 1 294 -15 354 323 78 5 chr10 9315141 9315322 -131001443 + MIR SINE MIR 20 218 -44 725 164 0 0 chr10 9315507 9315623 -131001142 - AluJb SINE Alu -196 116 1 325 348 28 14 chr10 9317173 9317314 -130999451 + MIR3 SINE MIR 41 183 -25 247 268 141 56 chr10 9318082 9318224 -130998541 - MIR3 SINE MIR -1 207 54 611 331 50 4 chr10 9318336 9318596 -130998169 - L2 LINE L2 -341 2973 2702 976 235 15 0 chr10 9318616 9318820 -130997945 - MER58A DNA MER1_type -16 208 2 328 200 0 13 chr10 9318825 9318900 -130997865 - L2 LINE L2 -615 2699 2626 573 55 0 0 chr10 9319074 9319147 -130997618 + (TTCC)n Simple_repeat Simple_repeat 4 76 0 1993 112 7 0 chr10 9319168 9319464 -130997301 - AluSp SINE Alu -15 298 1 2112 107 7 3 chr10 9320447 9320747 -130996018 + AluSx SINE Alu 1 301 -11 26 30 0 0 chr10 9321321 9321354 -130995411 + AT_rich Low_complexity Low_complexity 1 33 0 252 77 0 0 chr10 9321627 9321666 -130995099 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 6537 76 12 5 chr10 9321667 9322630 -130994135 - L1PA8 LINE L1 -24 6148 5180 3358 127 45 7 chr10 9322606 9323156 -130993609 + L1P LINE L1 3780 4350 -1796 * 658 53 11 0 chr10 9323191 9323285 -130993480 - L1PA13 LINE L1 -3 6160 6066 270 0 0 0 chr10 9323542 9323572 -130993193 + (TG)n Simple_repeat Simple_repeat 2 31 0 530 55 44 0 chr10 9324037 9324128 -130992637 + (TCTA)n Simple_repeat Simple_repeat 4 98 0 204 200 0 0 chr10 9325364 9325404 -130991361 + GA-rich Low_complexity Low_complexity 2 41 0 249 108 0 0 chr10 9325808 9325845 -130990920 + (TG)n Simple_repeat Simple_repeat 1 37 0 25 51 0 0 chr10 9326095 9326134 -130990631 + AT_rich Low_complexity Low_complexity 1 39 0 196 168 53 18 chr10 9326261 9326374 -130990391 + (TA)n Simple_repeat Simple_repeat 1 117 0 237 192 24 48 chr10 9326385 9326510 -130990255 + (TA)n Simple_repeat Simple_repeat 1 122 0 23 33 0 0 chr10 9326751 9326781 -130989984 + AT_rich Low_complexity Low_complexity 1 30 0 276 258 116 111 chr10 9328335 9328560 -130988205 - L2 LINE L2 0 3313 3088 212 361 18 54 chr10 9328578 9328744 -130988021 - L2 LINE L2 -445 2869 2710 6249 78 29 3 chr10 9328744 9329655 -130987110 + L1PA7 LINE L1 5223 6155 0 263 325 24 29 chr10 9329655 9329861 -130986904 + HAL1b LINE L1 378 582 -766 276 271 44 92 chr10 9330013 9330264 -130986501 + L1MC5 LINE L1 7289 7527 -434 357 333 46 6 chr10 9330370 9330544 -130986221 + L1ME3A LINE L1 5990 6170 0 325 284 82 22 chr10 9331227 9331361 -130985404 + MIR SINE MIR 51 192 -70 305 339 92 30 chr10 9331520 9331815 -130984950 - L1ME4a LINE L1 -184 5937 5625 1608 201 7 3 chr10 9332963 9333272 -130983493 + AluJb SINE Alu 1 310 0 219 337 53 42 chr10 9334290 9334385 -130982380 - L2 LINE L2 -21 3251 3156 377 317 129 12 chr10 9334526 9334913 -130981852 - L2 LINE L2 -407 2907 2413 1226 301 22 26 chr10 9334923 9335297 -130981468 + L2 LINE L2 2347 2720 -594 2214 117 0 0 chr10 9335297 9335596 -130981169 + AluSg SINE Alu 1 299 -11 1226 301 22 26 chr10 9335596 9335683 -130981082 + L2 LINE L2 2720 2806 -508 287 296 136 30 chr10 9335715 9335914 -130980851 - L2 LINE L2 -961 2353 2134 574 288 127 76 chr10 9335914 9336402 -130980363 + MLT1E LTR MaLR 1 558 -9 352 262 23 113 chr10 9336553 9336809 -130979956 - L2 LINE L2 -1819 1495 1263 2043 118 14 0 chr10 9337415 9337715 -130979050 + AluSx SINE Alu 1 304 0 218 385 10 26 chr10 9337718 9337910 -130978855 + L2 LINE L2 1767 1955 -1359 184 235 118 24 chr10 9338302 9338387 -130978378 + L2 LINE L2 1991 2083 -1231 2841 303 54 42 chr10 9338795 9340217 -130976548 + L2 LINE L2 1797 3235 -78 396 319 129 12 chr10 9340780 9340943 -130975822 + MIR3 SINE MIR 16 197 -11 2231 108 3 6 chr10 9341433 9341784 -130974981 - L1P LINE L1 -794 5352 5003 1217 47 0 0 chr10 9341799 9341982 -130974783 + L1PA4 LINE L1 5996 6178 0 362 346 55 11 chr10 9342210 9342392 -130974373 + MIR3 SINE MIR 10 199 -9 459 278 8 32 chr10 9343796 9343922 -130972843 - MIR SINE MIR 0 262 140 1029 201 65 76 chr10 9344468 9344837 -130971928 + MLT1A1 LTR MaLR 1 365 0 266 310 26 26 chr10 9344966 9345082 -130971683 - MIR SINE MIR -116 146 31 3318 111 16 2 chr10 9345304 9345801 -130970964 + L1PA15 LINE L1 5662 6165 0 2431 86 0 0 chr10 9346494 9346797 -130969968 - AluSg SINE Alu -7 303 1 603 296 49 16 chr10 9346906 9347213 -130969552 - L1ME4a LINE L1 -207 5914 5598 809 285 139 30 chr10 9347912 9348385 -130968380 - MLT1L LTR MaLR -1 614 90 1721 96 4 0 chr10 9348409 9348639 -130968126 + AluSg/x SINE Alu 74 304 -6 243 0 0 0 chr10 9349106 9349133 -130967632 + (A)n Simple_repeat Simple_repeat 1 27 0 455 313 98 27 chr10 9350020 9350244 -130966521 + MIR SINE MIR 2 241 -21 1936 135 0 0 chr10 9350683 9350987 -130965778 - AluSx SINE Alu 0 304 1 703 140 29 0 chr10 9351066 9351202 -130965563 + (CTTTA)n Simple_repeat Simple_repeat 2 141 0 2207 90 3 3 chr10 9351202 9351502 -130965263 - AluSg SINE Alu -10 300 1 537 282 153 5 chr10 9351590 9351806 -130964959 + MIR SINE MIR 14 261 -1 1809 117 48 31 chr10 9352371 9352492 -130964273 + AluSx SINE Alu 1 118 -194 198 0 0 0 chr10 9352492 9352514 -130964251 + (TAA)n Simple_repeat Simple_repeat 2 23 0 1809 117 48 31 chr10 9352514 9352682 -130964083 + AluSx SINE Alu 118 295 -17 232 182 0 0 chr10 9353623 9353667 -130963098 - MIR SINE MIR -109 153 110 27 62 0 0 chr10 9356692 9356740 -130960025 + AT_rich Low_complexity Low_complexity 1 48 0 25 31 0 0 chr10 9357117 9357149 -130959616 + AT_rich Low_complexity Low_complexity 1 32 0 25 90 0 0 chr10 9357426 9357493 -130959272 + AT_rich Low_complexity Low_complexity 1 67 0 357 24 0 0 chr10 9357710 9357752 -130959013 + (TG)n Simple_repeat Simple_repeat 2 43 0 414 0 0 0 chr10 9358657 9358703 -130958062 + (CA)n Simple_repeat Simple_repeat 1 46 0 1256 187 103 54 chr10 9360105 9360215 -130956550 - MER7A DNA MER2_type -2693 345 242 2268 62 0 0 chr10 9360215 9360491 -130956274 + AluY SINE Alu 1 276 -35 275 64 0 21 chr10 9360492 9360539 -130956226 + (CAAAA)n Simple_repeat Simple_repeat 1 46 0 1256 187 103 54 chr10 9360539 9360757 -130956008 - MER7A DNA MER2_type -2795 243 1 22 35 0 0 chr10 9361720 9361749 -130955016 + AT_rich Low_complexity Low_complexity 1 29 0 548 233 0 6 chr10 9361933 9362096 -130954669 + (TA)n Simple_repeat Simple_repeat 1 162 0 365 104 83 23 chr10 9364323 9364583 -130952182 + (TA)n Simple_repeat Simple_repeat 1 275 0 1419 117 206 8 chr10 9364631 9364879 -130951886 + AluSg1 SINE Alu 1 297 -12 26 74 0 0 chr10 9365212 9365266 -130951499 + AT_rich Low_complexity Low_complexity 1 54 0 216 0 0 0 chr10 9365696 9365720 -130951045 + (TCTA)n Simple_repeat Simple_repeat 4 27 0 2098 97 0 63 chr10 9365731 9366062 -130950703 - AluSx SINE Alu -2 310 1 1296 159 0 9 chr10 9366184 9366404 -130950361 - AluJb SINE Alu 0 312 95 210 260 14 0 chr10 9366498 9366571 -130950194 + (TA)n Simple_repeat Simple_repeat 1 74 0 21 36 0 0 chr10 9367140 9367168 -130949597 + AT_rich Low_complexity Low_complexity 1 28 0 2138 41 0 4 chr10 9367737 9368006 -130948759 + L1PA3 LINE L1 5888 6155 0 2135 119 7 3 chr10 9368257 9368560 -130948205 - AluSq SINE Alu -9 304 1 215 59 0 29 chr10 9368611 9368645 -130948120 + (TG)n Simple_repeat Simple_repeat 2 34 0 2081 102 3 23 chr10 9368696 9368999 -130947766 + AluSc SINE Alu 2 298 -11 24 0 0 0 chr10 9369039 9369063 -130947702 + AT_rich Low_complexity Low_complexity 1 24 0 288 200 0 0 chr10 9369175 9369245 -130947520 + (TATATG)n Simple_repeat Simple_repeat 5 74 0 215 123 0 53 chr10 9369388 9369445 -130947320 + (TA)n Simple_repeat Simple_repeat 2 55 0 741 156 0 0 chr10 9369843 9369971 -130946794 + AluSg/x SINE Alu 184 311 -1 311 210 25 103 chr10 9370722 9370872 -130945893 + HAL1b LINE L1 387 483 -865 2111 92 0 0 chr10 9371265 9371537 -130945228 - AluSg SINE Alu -4 306 35 22 56 0 0 chr10 9371903 9371939 -130944826 + AT_rich Low_complexity Low_complexity 1 36 0 248 315 61 44 chr10 9371984 9372165 -130944600 + MIR SINE MIR 53 236 -26 1949 82 90 4 chr10 9372555 9372822 -130943943 - AluSc SINE Alu -17 292 3 236 357 8 23 chr10 9372875 9373004 -130943761 + MIR3 SINE MIR 40 166 -42 2180 145 65 20 chr10 9373028 9373429 -130943336 + MSTB LTR MaLR 8 426 0 270 306 68 34 chr10 9373865 9374012 -130942753 + MIR3 SINE MIR 32 183 -25 27 0 0 0 chr10 9375180 9375207 -130941558 + AT_rich Low_complexity Low_complexity 1 27 0 448 329 55 21 chr10 9375887 9376124 -130940641 - MIR SINE MIR -16 246 2 352 315 94 71 chr10 9376661 9376915 -130939850 + HAL1 LINE L1 56 315 -2192 641 248 59 101 chr10 9377305 9377946 -130938819 + HAL1 LINE L1 861 1474 -1033 634 220 8 0 chr10 9377947 9378065 -130938700 + FLAM_C SINE Alu 2 120 -13 527 234 48 8 chr10 9378065 9378189 -130938576 + MER58B DNA MER1_type 181 309 -32 241 329 0 14 chr10 9380457 9380527 -130936238 - L2 LINE L2 -18 3254 3186 220 256 64 0 chr10 9380801 9380879 -130935886 + MIR SINE MIR 124 206 -56 2143 68 37 17 chr10 9381027 9381323 -130935442 - AluY SINE Alu -9 302 1 735 263 36 0 chr10 9381382 9381576 -130935189 - MIR SINE MIR -40 222 22 297 0 0 0 chr10 9382612 9382645 -130934120 + (CA)n Simple_repeat Simple_repeat 2 34 0 2152 88 0 18 chr10 9382646 9382960 -130933805 - AluY SINE Alu 0 309 1 260 227 0 82 chr10 9382964 9383061 -130933704 - L1M4 LINE L1 -981 5165 5077 1171 186 53 19 chr10 9383392 9383656 -130933109 + L1 LINE L1 4128 4400 -1746 318 164 0 0 chr10 9383768 9383823 -130932942 - MLT1H LTR MaLR -4 545 491 1311 193 3 67 chr10 9384670 9384970 -130931795 - AluJo SINE Alu -27 285 5 228 35 0 0 chr10 9384994 9385023 -130931742 + (TG)n Simple_repeat Simple_repeat 2 30 0 210 243 40 14 chr10 9385421 9385495 -130931270 - MIR SINE MIR -11 251 176 1736 72 38 0 chr10 9385662 9385898 -130930867 - L1PA7 LINE L1 -11 6143 5899 252 185 0 0 chr10 9386419 9386473 -130930292 + T-rich Low_complexity Low_complexity 1 54 0 498 361 61 4 chr10 9386786 9387016 -130929749 + MIR SINE MIR 2 244 -18 2269 144 67 8 chr10 9387121 9387523 -130929242 - MSTA LTR MaLR 0 428 3 231 329 49 63 chr10 9387701 9387844 -130928921 + L2 LINE L2 3132 3272 0 1520 181 21 91 chr10 9388147 9388388 -130928377 - MLT1B LTR MaLR 0 390 189 438 20 0 0 chr10 9388388 9388439 -130928326 + (TG)n Simple_repeat Simple_repeat 2 52 0 1520 181 21 91 chr10 9388439 9388616 -130928149 - MLT1B LTR MaLR -201 189 1 182 283 28 75 chr10 9389211 9389305 -130927460 - L2 LINE L2 -537 2777 2687 1826 163 0 10 chr10 9389305 9389600 -130927165 + AluJb SINE Alu 1 292 -20 182 283 28 75 chr10 9389600 9389611 -130927154 - L2 LINE L2 -627 2687 2677 293 309 100 0 chr10 9390341 9390451 -130926314 - MER103 DNA DNA -2 164 44 7185 33 2 0 chr10 9390481 9391339 -130925426 + L1PA5 LINE L1 5287 6146 -8 3264 128 27 19 chr10 9392552 9393075 -130923690 - MER1A DNA MER1_type 0 527 1 1830 117 0 78 chr10 9393555 9393884 -130922881 + AluSx SINE Alu 1 305 0 858 199 17 6 chr10 9394218 9394394 -130922371 - AluJb SINE Alu -5 307 130 644 324 65 16 chr10 9394435 9394682 -130922083 + MIR SINE MIR 4 262 0 506 275 31 25 chr10 9396393 9396553 -130920212 - MIR SINE MIR -10 252 92 25 51 0 0 chr10 9397741 9397780 -130918985 + AT_rich Low_complexity Low_complexity 1 39 0 26 30 0 0 chr10 9397852 9397885 -130918880 + AT_rich Low_complexity Low_complexity 1 33 0 4175 190 44 54 chr10 9397889 9398908 -130917857 - L1MB2 LINE L1 -3 6168 5188 2262 95 23 0 chr10 9398908 9399213 -130917552 - AluSx SINE Alu 0 312 1 4175 190 44 54 chr10 9399213 9399484 -130917281 - L1MB2 LINE L1 -983 5188 4916 654 298 36 0 chr10 9399573 9399825 -130916940 - MIR SINE MIR 0 262 2 250 203 14 14 chr10 9399863 9399937 -130916828 + CT-rich Low_complexity Low_complexity 2 75 0 303 181 0 0 chr10 9401771 9401843 -130914922 + GA-rich Low_complexity Low_complexity 1 72 0 24 0 0 0 chr10 9402327 9402351 -130914414 + AT_rich Low_complexity Low_complexity 1 24 0 983 174 25 5 chr10 9403957 9404158 -130912607 - L1MA5A LINE L1 -3 6294 6090 1507 177 50 4 chr10 9404764 9405091 -130911674 - AluJb SINE Alu 0 312 15 323 291 73 33 chr10 9405634 9405785 -130910980 + MER5A DNA MER1_type 1 157 -32 386 333 15 0 chr10 9406031 9406163 -130910602 + L2 LINE L2 3180 3313 0 182 185 0 74 chr10 9406426 9406480 -130910285 - L3 LINE CR1 -1221 356 307 25 0 0 0 chr10 9406624 9406649 -130910116 + AT_rich Low_complexity Low_complexity 1 25 0 1671 159 7 42 chr10 9406649 9406957 -130909808 - AluJo SINE Alu -15 297 1 1448 113 216 9 chr10 9408219 9408474 -130908291 - AluSg1 SINE Alu 0 305 3 454 280 37 53 chr10 9410349 9410538 -130906227 + MIR SINE MIR 21 206 -56 706 226 60 3 chr10 9410559 9410752 -130906013 + L1MA8 LINE L1 6086 6275 -16 1958 193 48 7 chr10 9410869 9411284 -130905481 + MSTB1 LTR MaLR 1 432 0 8889 192 14 10 chr10 9411284 9412915 -130903850 + MSTB-int LTR MaLR 1 1637 -14 2056 204 36 2 chr10 9412926 9413338 -130903427 + MSTB LTR MaLR 1 426 0 269 360 9 9 chr10 9413501 9413615 -130903150 - MIR SINE MIR -71 191 78 892 221 43 14 chr10 9413924 9414132 -130902633 + MST-int LTR MaLR 562 775 -876 180 0 0 0 chr10 9414743 9414763 -130902002 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 204 196 18 18 chr10 9415953 9416009 -130900756 + (TAAA)n Simple_repeat Simple_repeat 2 57 0 2712 187 8 2 chr10 9416121 9416646 -130900119 - L1 LINE L1 -1004 5142 4615 221 96 115 0 chr10 9416929 9416981 -130899784 + (ATATG)n Simple_repeat Simple_repeat 3 60 0 367 388 76 20 chr10 9417103 9417407 -130899358 - L1MEd LINE L1 -5556 563 243 459 248 85 28 chr10 9417974 9418115 -130898650 + MLT1H1 LTR MaLR 403 551 -4 186 312 143 0 chr10 9418318 9418395 -130898370 + L3 LINE CR1 1058 1145 -432 21 0 0 0 chr10 9418896 9418917 -130897848 + AT_rich Low_complexity Low_complexity 1 21 0 348 325 41 0 chr10 9419118 9419241 -130897524 - L2 LINE L2 -9 3304 3177 2316 81 10 3 chr10 9420374 9420671 -130896094 - AluSg SINE Alu -11 299 1 1023 209 4 31 chr10 9420761 9420986 -130895779 + MER20 DNA MER1_type 1 219 0 379 295 108 66 chr10 9421420 9421678 -130895087 - L3 LINE CR1 -2 1575 1307 21 0 0 0 chr10 9422502 9422523 -130894242 + AT_rich Low_complexity Low_complexity 1 21 0 298 260 149 19 chr10 9423089 9423243 -130893522 - MLT1J1 LTR MaLR -272 174 1 2551 97 39 8 chr10 9423700 9424090 -130892675 - L1PA12 LINE L1 -2 6166 5765 556 341 159 24 chr10 9424090 9424669 -130892096 + L2 LINE L2 2661 3313 0 528 101 13 0 chr10 9424821 9424900 -130891865 - MADE1 DNA Mariner 0 80 1 2155 104 7 20 chr10 9426244 9426542 -130890223 + AluSx SINE Alu 1 294 -18 646 345 47 45 chr10 9427941 9428449 -130888316 - HERV16 LTR ERVL -2921 2075 1567 2387 80 10 0 chr10 9428699 9428998 -130887767 - AluSc SINE Alu -7 302 1 211 329 14 0 chr10 9431033 9431103 -130885662 + (TG)n Simple_repeat Simple_repeat 1 71 0 1928 167 0 0 chr10 9433178 9433478 -130883287 - AluSx SINE Alu -12 300 1 1849 132 50 63 chr10 9433685 9434065 -130882700 - THE1C LTR MaLR 0 375 1 4148 110 86 95 chr10 9434710 9436103 -130880662 + pTR5 LTR ERV1 66 2438 0 2056 104 30 7 chr10 9436372 9436669 -130880096 + AluSx SINE Alu 1 304 -8 345 292 17 25 chr10 9436671 9436791 -130879974 - MER5B DNA MER1_type -59 119 1 193 243 84 65 chr10 9438178 9438285 -130878480 + L2 LINE L2 3200 3308 -5 26 0 0 0 chr10 9439024 9439050 -130877715 + AT_rich Low_complexity Low_complexity 1 26 0 560 247 78 119 chr10 9440323 9440674 -130876091 + L1ME LINE L1 11 328 -5742 1832 174 96 34 chr10 9440674 9441081 -130875684 + MSTB1 LTR MaLR 1 432 0 560 247 78 119 chr10 9441081 9441333 -130875432 + L1ME LINE L1 328 589 -5481 763 186 0 0 chr10 9441499 9441623 -130875142 - FLAM_C SINE Alu -19 124 1 2891 280 91 30 chr10 9441623 9444239 -130872526 + L1ME LINE L1 777 3568 -2512 1667 169 72 6 chr10 9444285 9444633 -130872132 + L1MA8 LINE L1 5808 6178 -113 854 205 0 0 chr10 9444800 9444951 -130871814 - FRAM SINE Alu -15 151 1 24 0 0 0 chr10 9444951 9444975 -130871790 + AT_rich Low_complexity Low_complexity 1 24 0 1355 165 0 38 chr10 9444987 9445224 -130871541 - AluJo SINE Alu -84 228 1 2639 33 0 0 chr10 9445799 9446105 -130870660 - AluY SINE Alu -5 306 1 25 0 0 0 chr10 9447745 9447770 -130868995 + AT_rich Low_complexity Low_complexity 1 25 0 1331 216 78 58 chr10 9448722 9449083 -130867682 - MLT1A2 LTR MaLR -1 373 6 459 236 121 50 chr10 9449233 9449415 -130867350 - MIR SINE MIR -27 235 41 451 207 12 18 chr10 9451099 9451268 -130865497 + (TA)n Simple_repeat Simple_repeat 2 169 0 213 180 0 0 chr10 9451307 9451357 -130865408 + (CATA)n Simple_repeat Simple_repeat 2 51 0 2139 99 20 3 chr10 9453003 9453297 -130863468 + AluSg SINE Alu 1 299 -11 319 303 47 57 chr10 9454168 9454379 -130862386 + HAL1b LINE L1 439 647 -701 27 0 0 0 chr10 9454507 9454534 -130862231 + AT_rich Low_complexity Low_complexity 1 27 0 339 300 96 33 chr10 9455136 9455376 -130861389 - MIR SINE MIR 0 262 8 392 308 0 0 chr10 9455405 9455509 -130861256 + L2 LINE L2 3210 3313 0 2005 115 14 0 chr10 9456387 9456717 -130860048 + AluSx SINE Alu 1 334 0 487 104 0 0 chr10 9456816 9456893 -130859872 - Alu SINE Alu -5 305 229 369 0 0 0 chr10 9458036 9458049 -130858716 + (CA)n Simple_repeat Simple_repeat 1 54 0 369 0 0 0 chr10 9458049 9458090 -130858675 + (CA)n Simple_repeat Simple_repeat 2 42 0 920 105 8 0 chr10 9459096 9459220 -130857545 - AluSx SINE Alu -24 286 162 742 133 0 9 chr10 9459220 9459333 -130857432 - AluSx SINE Alu -200 112 1 25 51 0 0 chr10 9460015 9460054 -130856711 + AT_rich Low_complexity Low_complexity 1 39 0 24 0 0 0 chr10 9461628 9461652 -130855113 + AT_rich Low_complexity Low_complexity 1 24 0 27 49 0 0 chr10 9462376 9462417 -130854348 + AT_rich Low_complexity Low_complexity 1 41 0 22 70 0 0 chr10 9462662 9462705 -130854060 + AT_rich Low_complexity Low_complexity 1 43 0 1616 125 29 11 chr10 9463137 9463409 -130853356 + Tigger7 DNA MER2_type 2311 2587 0 27 87 0 0 chr10 9464233 9464302 -130852463 + AT_rich Low_complexity Low_complexity 1 69 0 625 286 95 62 chr10 9465078 9465817 -130850948 - LTR41 LTR ERVL -10 763 1 1230 164 9 14 chr10 9465968 9466187 -130850578 - MER46A DNA MER2_type 0 236 19 773 255 106 64 chr10 9466275 9466651 -130850114 + MLT1J LTR MaLR 79 470 -41 417 177 26 9 chr10 9466761 9466874 -130849891 + CT-rich Low_complexity Low_complexity 3 117 0 1858 156 7 14 chr10 9466876 9467171 -130849594 - AluSq SINE Alu -20 293 1 1097 295 87 2 chr10 9467559 9467952 -130848813 + LTR16A LTR ERVL 22 447 -3 2805 13 0 3 chr10 9468443 9468755 -130848010 + AluYa5 SINE Alu 1 311 0 25 51 0 0 chr10 9469128 9469167 -130847598 + AT_rich Low_complexity Low_complexity 1 39 0 284 332 103 18 chr10 9469616 9469839 -130846926 + MIR SINE MIR 15 256 -6 22 0 0 0 chr10 9470734 9470756 -130846009 + AT_rich Low_complexity Low_complexity 1 22 0 1964 106 32 3 chr10 9472808 9473092 -130843673 + AluSq SINE Alu 1 292 -21 189 0 0 0 chr10 9473389 9473410 -130843355 + (TAA)n Simple_repeat Simple_repeat 3 23 0 272 254 0 15 chr10 9473412 9473479 -130843286 + MLT1E1-int LTR MaLR 1135 1200 -171 1889 223 110 43 chr10 9473592 9474202 -130842563 + MLT1E1 LTR MaLR 1 651 -3 21 0 0 0 chr10 9474673 9474694 -130842071 + AT_rich Low_complexity Low_complexity 1 21 0 21 71 0 0 chr10 9475344 9475386 -130841379 + AT_rich Low_complexity Low_complexity 1 42 0 254 319 30 30 chr10 9475583 9475718 -130841047 - L2 LINE L2 -2 3270 3136 342 0 0 0 chr10 9476218 9476256 -130840509 + (TG)n Simple_repeat Simple_repeat 2 39 0 247 300 0 67 chr10 9476996 9477116 -130839649 - MIR SINE MIR -50 212 101 248 318 190 11 chr10 9477443 9477622 -130839143 + MIR SINE MIR 10 220 -42 223 225 0 0 chr10 9478994 9479034 -130837731 + MIR SINE MIR 48 87 -175 226 316 82 0 chr10 9480148 9480246 -130836519 + MIR SINE MIR 19 124 -84 267 93 0 0 chr10 9486495 9486538 -130830227 + (A)n Simple_repeat Simple_repeat 1 43 0 24 0 0 0 chr10 9487394 9487418 -130829347 + AT_rich Low_complexity Low_complexity 1 24 0 441 272 88 8 chr10 9487756 9487881 -130828884 + MIR3 SINE MIR 42 176 -32 21 71 0 0 chr10 9488003 9488045 -130828720 + AT_rich Low_complexity Low_complexity 1 42 0 226 163 23 0 chr10 9488470 9488513 -130828252 + LTR8A LTR ERV1 207 250 -477 186 43 0 0 chr10 9489417 9489440 -130827325 + (A)n Simple_repeat Simple_repeat 1 23 0 207 0 0 0 chr10 9489443 9489466 -130827299 + (CAGGC)n Simple_repeat Simple_repeat 5 27 0 25 31 0 0 chr10 9491509 9491541 -130825224 + AT_rich Low_complexity Low_complexity 1 32 0 193 323 38 113 chr10 9492118 9492304 -130824461 - MIR SINE MIR -66 196 25 514 288 29 0 chr10 9493051 9493190 -130823575 - MIR SINE MIR -1 261 119 276 91 0 0 chr10 9493202 9493246 -130823519 + (TA)n Simple_repeat Simple_repeat 2 45 0 297 315 67 17 chr10 9493609 9493787 -130822978 - HAL1 LINE L1 -1112 1395 1209 333 0 0 0 chr10 9493977 9494014 -130822751 + (TG)n Simple_repeat Simple_repeat 2 38 0 264 39 19 39 chr10 9494271 9494323 -130822442 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 2328 71 4 0 chr10 9494325 9494606 -130822159 - AluY SINE Alu -29 282 1 2493 255 40 69 chr10 9496133 9497194 -130819571 + L1MEc LINE L1 29 1059 -5337 989 205 10 29 chr10 9497206 9497411 -130819354 + MLT1D LTR MaLR 1 201 -304 185 65 32 0 chr10 9497412 9497443 -130819322 + (TTTC)n Simple_repeat Simple_repeat 3 34 0 287 111 42 14 chr10 9497475 9497547 -130819218 + CT-rich Low_complexity Low_complexity 3 76 0 886 236 34 61 chr10 9497547 9497611 -130819154 + MLT1D LTR MaLR 214 278 -227 2120 129 7 0 chr10 9497611 9497914 -130818851 + AluSq SINE Alu 1 305 -8 886 236 34 61 chr10 9497914 9498146 -130818619 + MLT1D LTR MaLR 278 502 -3 689 280 70 14 chr10 9498147 9498433 -130818332 + L1MEc LINE L1 1072 1373 -5023 963 272 191 8 chr10 9498528 9499130 -130817635 + L1MEc LINE L1 1552 2263 -4133 32 57 0 0 chr10 9499138 9499191 -130817574 + AT_rich Low_complexity Low_complexity 1 53 0 21 36 0 0 chr10 9499458 9499486 -130817279 + AT_rich Low_complexity Low_complexity 1 28 0 255 327 26 9 chr10 9499487 9499600 -130817165 + L2 LINE L2 2274 2388 -926 6512 200 19 16 chr10 9499909 9501926 -130814839 + L1MA2 LINE L1 3176 5203 -2362 2474 192 12 2 chr10 9501924 9502418 -130814347 + L1MA2 LINE L1 6041 6539 -1026 * 2178 111 3 6 chr10 9502401 9502717 -130814048 + L1MA2 LINE L1 6894 7208 -515 * 347 179 17 103 chr10 9503007 9503124 -130813641 + MER112 DNA MER1_type 2 108 -152 2489 132 2 32 chr10 9503141 9503447 -130813318 + L1MA2 LINE L1 7190 7481 -242 2485 71 0 0 chr10 9503447 9503757 -130813008 + AluSg SINE Alu 1 310 0 2489 132 2 32 chr10 9503757 9503889 -130812876 + L1MA2 LINE L1 7481 7615 -108 26 0 0 0 chr10 9504020 9504046 -130812719 + AT_rich Low_complexity Low_complexity 1 26 0 2309 97 3 0 chr10 9506432 9506740 -130810025 - AluY SINE Alu -2 309 1 186 133 0 0 chr10 9506969 9506999 -130809766 + (T)n Simple_repeat Simple_repeat 1 30 0 1156 117 0 0 chr10 9507715 9507878 -130808887 + AluSq SINE Alu 137 299 -14 181 341 55 82 chr10 9507893 9508186 -130808579 - L2 LINE L2 -2 3270 2986 21 36 0 0 chr10 9509648 9509676 -130807089 + AT_rich Low_complexity Low_complexity 1 28 0 1703 96 17 0 chr10 9510565 9510804 -130805961 - L1PA10 LINE L1 -14 6154 5912 311 325 0 0 chr10 9511242 9511325 -130805440 + L2 LINE L2 2225 2307 -1007 445 325 64 11 chr10 9511404 9511592 -130805173 + MIR SINE MIR 65 262 0 226 363 11 28 chr10 9511604 9511783 -130804982 + L2 LINE L2 2323 2498 -816 185 360 88 20 chr10 9511883 9512030 -130804735 + L2 LINE L2 2631 2787 -527 23 68 0 0 chr10 9512540 9512584 -130804181 + AT_rich Low_complexity Low_complexity 1 44 0 255 336 153 15 chr10 9515365 9515502 -130801263 + L2 LINE L2 3116 3271 -1 211 179 36 0 chr10 9516505 9516561 -130800204 + (TA)n Simple_repeat Simple_repeat 2 59 0 21 0 0 0 chr10 9517663 9517684 -130799081 + AT_rich Low_complexity Low_complexity 1 21 0 531 0 0 0 chr10 9519163 9519222 -130797543 + (CA)n Simple_repeat Simple_repeat 2 60 0 1899 86 3 86 chr10 9519229 9519533 -130797232 - AluSg SINE Alu -31 279 1 1317 177 50 0 chr10 9519994 9520304 -130796461 - L1P LINE L1 -759 5406 5086 3300 107 2 4 chr10 9520304 9520798 -130795967 + L1PA13 LINE L1 5669 6163 0 235 149 0 30 chr10 9521363 9521430 -130795335 + (CA)n Simple_repeat Simple_repeat 2 66 0 23 33 0 0 chr10 9522141 9522171 -130794594 + AT_rich Low_complexity Low_complexity 1 30 0 2801 179 21 40 chr10 9522875 9523916 -130792849 - L1MA10 LINE L1 -373 5795 4781 266 208 0 0 chr10 9523913 9523966 -130792799 + L1MA10 LINE L1 5786 5838 -496 * 191 61 30 0 chr10 9523971 9524004 -130792761 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 6451 102 32 110 chr10 9524008 9525432 -130791333 - SVA Other Other -17 1369 57 917 106 0 22 chr10 9525432 9525612 -130791153 + (GGGAGA)n Simple_repeat Simple_repeat 5 180 0 1969 212 56 30 chr10 9525717 9526068 -130790697 + L1MA10 LINE L1 5820 6190 -144 1989 117 22 0 chr10 9526068 9526363 -130790402 + AluSq SINE Alu 5 305 0 1969 212 56 30 chr10 9526363 9526511 -130790254 + L1MA10 LINE L1 6190 6333 -1 189 0 0 0 chr10 9526816 9526837 -130789928 + (CCA)n Simple_repeat Simple_repeat 2 22 0 700 271 140 13 chr10 9527419 9527648 -130789117 + MIR SINE MIR 5 262 0 180 0 0 0 chr10 9527936 9527956 -130788809 + (TG)n Simple_repeat Simple_repeat 2 21 0 333 0 0 0 chr10 9528191 9528228 -130788537 + (TG)n Simple_repeat Simple_repeat 2 38 0 1998 136 0 3 chr10 9528229 9528515 -130788250 - AluSx SINE Alu -27 285 1 329 321 78 10 chr10 9528845 9529038 -130787727 + L1MC4a LINE L1 5791 5996 -1812 228 68 0 68 chr10 9530138 9530197 -130786568 + (TTTTTG)n Simple_repeat Simple_repeat 2 56 0 352 284 72 93 chr10 9530703 9530822 -130785943 - L1M4 LINE L1 -3187 2959 2839 2135 100 4 0 chr10 9530822 9531126 -130785639 + AluSx SINE Alu 13 317 0 352 284 72 93 chr10 9531126 9531434 -130785331 - L1M4 LINE L1 -3307 2839 2540 387 0 0 0 chr10 9531443 9531486 -130785279 + (TTA)n Simple_repeat Simple_repeat 2 44 0 2776 104 15 5 chr10 9531488 9531890 -130784875 - L1PA11 LINE L1 -15 6159 5754 26 0 0 0 chr10 9532916 9532942 -130783823 + AT_rich Low_complexity Low_complexity 1 26 0 439 261 56 0 chr10 9534212 9534354 -130782411 - MER104 DNA Tc2 -30 150 1 2401 80 0 19 chr10 9534397 9534708 -130782057 - AluSg1 SINE Alu -4 305 1 616 184 0 0 chr10 9535342 9535445 -130781320 - FLAM_A SINE Alu -18 124 22 30 0 0 0 chr10 9537539 9537569 -130779196 + AT_rich Low_complexity Low_complexity 1 30 0 186 43 0 0 chr10 9537602 9537625 -130779140 + (CAAAA)n Simple_repeat Simple_repeat 5 27 0 23 0 0 0 chr10 9538510 9538533 -130778232 + AT_rich Low_complexity Low_complexity 1 23 0 316 295 14 65 chr10 9538855 9538994 -130777771 - L2 LINE L2 0 3313 3182 394 301 51 59 chr10 9539589 9539825 -130776940 + L2 LINE L2 3072 3305 -8 407 216 21 21 chr10 9539952 9540049 -130776716 - MLT1J2 LTR MaLR -284 166 70 768 136 0 64 chr10 9540058 9540198 -130776567 + FLAM_C SINE Alu 3 133 0 24 0 0 0 chr10 9540655 9540679 -130776086 + AT_rich Low_complexity Low_complexity 1 24 0 263 279 37 62 chr10 9541041 9541188 -130775577 + L2 LINE L2 3156 3300 -13 216 67 0 0 chr10 9541188 9541218 -130775547 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 263 279 37 62 chr10 9541218 9541231 -130775534 + L2 LINE L2 3300 3312 -1 186 103 0 0 chr10 9541319 9541348 -130775417 + (TC)n Simple_repeat Simple_repeat 2 30 0 248 277 74 74 chr10 9541720 9541922 -130774843 - MER112 DNA MER1_type -9 251 50 601 277 66 21 chr10 9543489 9543731 -130773034 + MIR SINE MIR 10 262 0 41 48 0 0 chr10 9543897 9543959 -130772806 + AT_rich Low_complexity Low_complexity 1 62 0 332 211 28 110 chr10 9543969 9544003 -130772762 + MARNA DNA Mariner 119 154 -432 264 59 0 0 chr10 9544003 9544037 -130772728 + (TA)n Simple_repeat Simple_repeat 2 35 0 2056 112 14 11 chr10 9544037 9544324 -130772441 - AluSq SINE Alu -25 288 1 332 211 28 110 chr10 9544324 9544397 -130772368 + MARNA DNA Mariner 152 218 -368 3326 136 20 36 chr10 9544405 9544689 -130772076 + L1MA8 LINE L1 5668 5955 -336 2224 100 0 3 chr10 9544689 9544980 -130771785 + AluSg SINE Alu 6 295 -15 3326 136 20 36 chr10 9544980 9545329 -130771436 + L1MA8 LINE L1 5955 6291 0 879 254 5 10 chr10 9545522 9545731 -130771034 - MER58A DNA MER1_type -16 208 1 495 294 44 6 chr10 9546241 9546401 -130770364 - MIR3 SINE MIR -11 197 32 21 0 0 0 chr10 9547499 9547520 -130769245 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr10 9548671 9548708 -130768057 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr10 9550130 9550153 -130766612 + AT_rich Low_complexity Low_complexity 1 23 0 2189 108 7 0 chr10 9550971 9551278 -130765487 + AluSq SINE Alu 1 309 -4 264 326 26 34 chr10 9551965 9552123 -130764642 - MIR SINE MIR -81 127 17 742 186 36 7 chr10 9552358 9552498 -130764267 - FRAM SINE Alu -26 150 7 22 56 0 0 chr10 9552618 9552654 -130764111 + AT_rich Low_complexity Low_complexity 1 36 0 286 211 32 84 chr10 9554050 9554145 -130762620 - MIR3 SINE MIR -21 187 98 211 322 20 74 chr10 9554815 9554964 -130761801 + L2 LINE L2 1803 1943 -1371 369 324 17 56 chr10 9555096 9555275 -130761490 + LTR16A LTR ERVL 198 369 -81 1001 223 96 98 chr10 9555380 9555807 -130760958 + MSTA LTR MaLR 1 426 -2 430 53 80 53 chr10 9556212 9556287 -130760478 + MADE1 DNA Mariner 4 80 0 197 108 27 0 chr10 9556631 9556668 -130760097 + (CTTTG)n Simple_repeat Simple_repeat 2 39 0 5466 102 16 5 chr10 9557455 9558260 -130758505 + L1PA13 LINE L1 5348 6161 -2 190 323 183 11 chr10 9558787 9558880 -130757885 + MIR3 SINE MIR 46 154 -54 261 229 104 31 chr10 9561014 9561110 -130755655 - L2 LINE L2 -10 3303 3201 420 287 72 24 chr10 9561211 9561378 -130755387 + MER5B DNA MER1_type 1 175 -3 261 179 0 119 chr10 9561388 9561455 -130755310 + L2 LINE L2 3213 3271 -1 2218 124 0 0 chr10 9562234 9562532 -130754233 + AluSx SINE Alu 1 298 -14 522 311 34 10 chr10 9563291 9563500 -130753265 + L1MC4 LINE L1 6459 6672 -1370 566 306 52 9 chr10 9565686 9565915 -130750850 - HERV16 LTR ERVL -2550 3104 2866 334 345 6 24 chr10 9566246 9566414 -130750351 - HERV16 LTR ERVL -3194 2460 2296 2299 113 54 6 chr10 9566425 9566778 -130749987 - THE1C LTR MaLR -3 372 3 355 386 33 39 chr10 9567217 9567637 -130749128 - HERV16 LTR ERVL -3425 1571 1323 252 308 130 35 chr10 9568519 9568688 -130748077 + L2 LINE L2 3109 3293 -20 24 0 0 0 chr10 9569040 9569064 -130747701 + AT_rich Low_complexity Low_complexity 1 24 0 1369 239 15 39 chr10 9569418 9569545 -130747220 + L1MB7 LINE L1 5789 5917 -267 2173 100 17 7 chr10 9569545 9569845 -130746920 - AluSx SINE Alu -9 303 1 1369 239 15 39 chr10 9569845 9570106 -130746659 + L1MB7 LINE L1 5917 6168 -16 312 322 20 0 chr10 9570187 9570386 -130746379 + L1M4 LINE L1 2349 2551 -3595 258 182 26 13 chr10 9570491 9570568 -130746197 + (CATATA)n Simple_repeat Simple_repeat 2 79 0 322 259 130 19 chr10 9570568 9570730 -130746035 + L1MCa LINE L1 2017 2196 -4230 517 248 30 0 chr10 9570762 9570895 -130745870 + L1MC3 LINE L1 6599 6735 -1050 316 211 32 16 chr10 9570899 9571022 -130745743 + L1MB7 LINE L1 6058 6182 -2 186 103 0 0 chr10 9572286 9572315 -130744450 + (TCCC)n Simple_repeat Simple_repeat 3 31 0 1038 104 6 22 chr10 9572327 9572510 -130744255 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 22 0 0 0 chr10 9572993 9573015 -130743750 + AT_rich Low_complexity Low_complexity 1 22 0 215 246 0 18 chr10 9574952 9575009 -130741756 + (CATA)n Simple_repeat Simple_repeat 3 58 0 248 245 161 59 chr10 9575010 9575296 -130741469 - L1MC4 LINE L1 -131 7911 7597 454 301 21 36 chr10 9575332 9575525 -130741240 - L1MC4a LINE L1 -393 7415 7226 2294 89 3 3 chr10 9576108 9576412 -130740353 + AluSp SINE Alu 1 304 -9 330 317 147 75 chr10 9577854 9578326 -130738439 - L1MEd LINE L1 -730 1760 1139 190 56 56 0 chr10 9578326 9578362 -130738403 + (TA)n Simple_repeat Simple_repeat 1 38 0 330 317 147 75 chr10 9578362 9578535 -130738230 - L1MEd LINE L1 -1351 1139 980 345 200 38 25 chr10 9579415 9579495 -130737270 + MLT1J LTR MaLR 100 180 -331 2134 120 0 3 chr10 9579538 9579846 -130736919 + AluSc SINE Alu 1 307 -2 1099 211 19 42 chr10 9580312 9580572 -130736193 + L1M4 LINE L1 4536 4789 -1357 2050 127 37 0 chr10 9580891 9581190 -130735575 + AluSq SINE Alu 2 311 -2 2114 171 88 0 chr10 9581667 9582053 -130734712 + MSTB LTR MaLR 3 422 -4 824 110 0 0 chr10 9582673 9582782 -130733983 + AluSq SINE Alu 105 213 -100 870 230 61 9 chr10 9583445 9583675 -130733090 - L1MB8 LINE L1 -6 6172 5931 1585 58 98 146 chr10 9583681 9584010 -130732755 - AluY SINE Alu 0 315 1 190 235 44 44 chr10 9584352 9584420 -130732345 - MIR SINE MIR 0 262 195 22 35 0 0 chr10 9584430 9584459 -130732306 + AT_rich Low_complexity Low_complexity 1 29 0 2009 105 15 52 chr10 9584915 9585239 -130731526 - AluSx SINE Alu 0 312 1 201 362 148 0 chr10 9585683 9585832 -130730933 - L2 LINE L2 -448 2866 2696 983 217 29 16 chr10 9585837 9586081 -130730684 + MLT1A1 LTR MaLR 2 248 -117 192 250 17 50 chr10 9586259 9586319 -130730446 + MIR SINE MIR 205 262 0 491 216 9 38 chr10 9586365 9586496 -130730269 + MLT1A1 LTR MaLR 250 365 0 433 370 56 40 chr10 9586517 9586998 -130729767 - L2 LINE L2 -639 2675 2187 449 324 48 67 chr10 9587006 9587321 -130729444 + L2 LINE L2 2961 3269 -3 2062 120 6 43 chr10 9587331 9587680 -130729085 + L1MA9 LINE L1 5447 5782 -509 3750 112 0 15 chr10 9587703 9588238 -130728527 - MER1A DNA MER1_type 0 527 1 2531 169 31 10 chr10 9588294 9588815 -130727950 + L1MA9 LINE L1 5781 6312 0 407 313 95 29 chr10 9589947 9590381 -130726384 - LTR33 LTR ERVL -2 519 24 507 189 29 11 chr10 9590520 9590611 -130726154 + (TAGA)n Simple_repeat Simple_repeat 3 91 -89 1944 201 6 6 chr10 9590611 9590975 -130725790 + MLT1A1 LTR MaLR 2 365 0 507 189 29 11 chr10 9590975 9591058 -130725707 + (TAGA)n Simple_repeat Simple_repeat 91 180 0 268 193 0 133 chr10 9591085 9591168 -130725597 - MLT2C1 LTR ERVL -50 347 276 546 185 67 8 chr10 9591492 9591611 -130725154 - MSTB1 LTR MaLR -2 430 305 283 103 69 0 chr10 9591590 9591648 -130725117 + AluYb8 SINE Alu 243 304 -4 * 324 314 102 28 chr10 9592109 9592392 -130724373 + L1M4 LINE L1 4247 4550 -1596 1264 107 58 0 chr10 9592415 9592621 -130724144 + L1MA1 LINE L1 6085 6302 0 238 139 38 25 chr10 9593767 9593846 -130722919 + GA-rich Low_complexity Low_complexity 2 81 0 2182 117 3 3 chr10 9595286 9595584 -130721181 - AluSq SINE Alu -15 298 1 683 301 58 62 chr10 9595724 9596223 -130720542 - LTR67 LTR ERVL -22 535 39 440 273 41 78 chr10 9596281 9596523 -130720242 - L2 LINE L2 -4 3309 3077 2022 124 41 0 chr10 9596744 9597034 -130719731 - AluSx SINE Alu -10 302 1 3943 223 89 96 chr10 9597039 9599159 -130717606 - L1MCa LINE L1 -2805 3621 1487 2259 113 33 33 chr10 9599159 9599523 -130717242 + THE1B LTR MaLR 1 364 0 3943 223 89 96 chr10 9599523 9600780 -130715985 - L1MCa LINE L1 -4939 1487 263 2143 129 134 3 chr10 9600780 9601153 -130715612 - MSTA LTR MaLR -2 426 5 3943 223 89 96 chr10 9601153 9601281 -130715484 - L1MCa LINE L1 -6163 263 136 2156 131 3 10 chr10 9601294 9601608 -130715157 - AluSx SINE Alu 0 312 1 2057 140 10 0 chr10 9601653 9601961 -130714804 + AluSq SINE Alu 1 311 -2 745 317 101 29 chr10 9601963 9602379 -130714386 - LTR67 LTR ERVL -79 478 33 1539 213 44 49 chr10 9603122 9603511 -130713254 + MLT1B LTR MaLR 1 387 -3 397 298 43 6 chr10 9604462 9604623 -130712142 - MER110A LTR ERV1 0 468 302 2383 80 0 3 chr10 9604643 9604955 -130711810 + AluY SINE Alu 1 311 0 308 149 0 15 chr10 9604968 9605035 -130711730 + (TA)n Simple_repeat Simple_repeat 2 67 0 395 247 92 35 chr10 9605036 9605210 -130711555 + L1MB7 LINE L1 1706 1889 -4495 2329 216 82 55 chr10 9605254 9605646 -130711119 + L1MB7 LINE L1 5085 5465 -955 1739 173 14 3 chr10 9605646 9605929 -130710836 + AluJb SINE Alu 1 286 -26 2329 216 82 55 chr10 9605929 9606696 -130710069 + L1MB7 LINE L1 5465 6420 0 718 287 78 29 chr10 9607415 9607659 -130709106 + MIR SINE MIR 2 257 -5 2042 106 51 7 chr10 9607748 9608040 -130708725 + AluSg SINE Alu 1 305 -5 1984 127 43 0 chr10 9608528 9608827 -130707938 - AluSx SINE Alu 0 312 1 475 119 10 69 chr10 9609520 9609621 -130707144 - L1MA6 LINE L1 -303 5997 5903 1613 156 13 42 chr10 9610127 9610434 -130706331 + Tigger2a DNA MER2_type 2 299 -135 534 109 10 69 chr10 9610465 9610566 -130706199 - L1MA6 LINE L1 -303 5997 5903 2358 104 0 0 chr10 9610960 9611268 -130705497 + AluSg SINE Alu 1 308 -2 183 333 0 0 chr10 9611290 9611332 -130705433 + MIR SINE MIR 23 64 -198 243 174 10 82 chr10 9611342 9611440 -130705325 - L1MC4 LINE L1 -1338 6704 6614 238 213 16 31 chr10 9611445 9611707 -130705058 + (TA)n Simple_repeat Simple_repeat 1 257 0 180 77 0 0 chr10 9612313 9612339 -130704426 + (TC)n Simple_repeat Simple_repeat 1 26 0 2030 134 17 0 chr10 9612339 9612630 -130704135 - AluSx SINE Alu -8 304 9 1736 156 64 37 chr10 9614072 9614400 -130702365 + MER1B DNA MER1_type 1 337 0 235 209 314 0 chr10 9615158 9615244 -130701521 + MIR SINE MIR 128 240 -22 300 266 75 75 chr10 9615353 9615552 -130701213 + MLT1K LTR MaLR 349 547 -41 1811 133 14 0 chr10 9615666 9615967 -130700798 - AluSx SINE Alu 0 305 1 189 349 0 32 chr10 9616065 9616128 -130700637 - L2 LINE L2 -76 3196 3136 319 242 31 47 chr10 9616700 9616736 -130700029 + CT-rich Low_complexity Low_complexity 3 38 -90 2735 88 3 0 chr10 9616736 9617099 -130699666 + THE1B LTR MaLR 1 364 0 319 242 31 47 chr10 9617099 9617190 -130699575 + CT-rich Low_complexity Low_complexity 38 128 0 905 118 0 7 chr10 9617203 9617355 -130699410 + (TTC)n Simple_repeat Simple_repeat 2 152 0 2121 133 7 0 chr10 9617394 9617696 -130699069 + AluSx SINE Alu 1 304 -8 256 345 53 35 chr10 9618026 9618139 -130698626 - L2 LINE L2 -21 3251 3137 1284 212 75 47 chr10 9618285 9618644 -130698121 - MLT1A2 LTR MaLR -5 369 1 869 218 17 6 chr10 9618826 9619000 -130697765 - MER5A DNA MER1_type -5 184 9 940 247 60 33 chr10 9619022 9619322 -130697443 + L1ME3A LINE L1 5805 6112 -58 187 404 27 76 chr10 9619393 9619616 -130697149 - L2 LINE L2 -11 3261 3050 2667 227 64 112 chr10 9620350 9621456 -130695309 - L1MC/D LINE L1 -743 5797 5002 189 0 0 0 chr10 9621456 9621477 -130695288 + (TG)n Simple_repeat Simple_repeat 2 22 0 2667 227 64 112 chr10 9621477 9622359 -130694406 - L1MC/D LINE L1 -1538 5002 4079 221 56 0 28 chr10 9622359 9622395 -130694370 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 7120 24 0 0 chr10 9622395 9623217 -130693548 - L1PA3 LINE L1 -24 6131 5310 * 9994 22 0 0 chr10 9623215 9624393 -130692372 + L1PA3 LINE L1 4125 5302 -844 509 254 55 22 chr10 9624393 9624574 -130692191 - L1MC/D LINE L1 -2449 4091 3905 558 224 17 70 chr10 9624578 9624819 -130691946 - L1MC/D LINE L1 -4809 1731 1504 1274 217 23 23 chr10 9624934 9625233 -130691532 - L1MB8 LINE L1 -9 6169 5871 262 333 0 0 chr10 9625537 9625606 -130691159 - LTR16A LTR ERVL -122 328 260 * 516 208 0 0 chr10 9625605 9625711 -130691054 + Cheshire DNA MER1_type 717 822 -1598 303 273 0 0 chr10 9625743 9625809 -130690956 - Tigger5 DNA MER2_type 0 2323 2258 * 304 146 21 0 chr10 9625805 9625853 -130690912 + Tigger5 DNA MER2_type 2272 2320 -3 * 378 222 0 25 chr10 9625853 9625933 -130690832 - Tigger5 DNA MER2_type -2245 78 1 1047 94 0 0 chr10 9625943 9626102 -130690663 + L1MA8 LINE L1 6130 6288 -3 4066 196 40 17 chr10 9626102 9626986 -130689779 + Cheshire DNA MER1_type 847 1750 -670 238 139 38 25 chr10 9678104 9678183 -130638582 + GA-rich Low_complexity Low_complexity 2 81 0 2211 114 3 3 chr10 9679623 9679922 -130636843 - AluSq SINE Alu -14 299 1 683 301 58 62 chr10 9680062 9680561 -130636204 - LTR67 LTR ERVL -22 535 39 440 273 41 78 chr10 9680619 9680861 -130635904 - L2 LINE L2 -4 3309 3077 2022 124 41 0 chr10 9681082 9681372 -130635393 - AluSx SINE Alu -10 302 1 3967 224 88 96 chr10 9681377 9683497 -130633268 - L1MCa LINE L1 -2805 3621 1487 2259 113 33 33 chr10 9683497 9683861 -130632904 + THE1B LTR MaLR 1 364 0 3967 224 88 96 chr10 9683861 9685118 -130631647 - L1MCa LINE L1 -4939 1487 263 2175 121 134 3 chr10 9685118 9685491 -130631274 - MSTA LTR MaLR -2 426 5 3967 224 88 96 chr10 9685491 9685619 -130631146 - L1MCa LINE L1 -6163 263 136 2189 127 3 10 chr10 9685636 9685950 -130630815 - AluSx SINE Alu 0 312 1 1072 175 13 35 chr10 9686260 9686488 -130630277 + AluSq SINE Alu 89 311 -2 732 317 101 29 chr10 9686490 9686906 -130629859 - LTR67 LTR ERVL -79 478 33 1511 216 44 49 chr10 9687651 9688040 -130628725 + MLT1B LTR MaLR 1 387 -3 199 346 111 43 chr10 9688052 9688376 -130628389 - L2 LINE L2 -1210 2104 1759 415 292 43 6 chr10 9688990 9689151 -130627614 - MER110A LTR ERV1 0 468 302 2382 72 7 3 chr10 9689171 9689478 -130627287 + AluY SINE Alu 1 308 -3 336 242 11 22 chr10 9689496 9689587 -130627178 - L1MC4 LINE L1 -1339 6703 6614 381 253 92 35 chr10 9689590 9689764 -130627001 + L1MB7 LINE L1 1706 1889 -4495 2295 218 82 55 chr10 9689808 9690200 -130626565 + L1MB7 LINE L1 5085 5465 -955 1765 170 14 3 chr10 9690200 9690483 -130626282 + AluJb SINE Alu 1 286 -26 2295 218 82 55 chr10 9690483 9691250 -130625515 + L1MB7 LINE L1 5465 6420 0 684 295 78 29 chr10 9691968 9692212 -130624553 + MIR SINE MIR 2 257 -5 2255 108 0 7 chr10 9692301 9692606 -130624159 + AluSg SINE Alu 1 303 -7 1984 127 43 0 chr10 9693094 9693393 -130623372 - AluSx SINE Alu 0 312 1 475 119 10 69 chr10 9694087 9694188 -130622577 - L1MA6 LINE L1 -303 5997 5903 183 42 0 0 chr10 9694346 9694370 -130622395 + (A)n Simple_repeat Simple_repeat 1 24 0 1636 153 13 42 chr10 9694696 9695003 -130621762 + Tigger2a DNA MER2_type 2 299 -135 549 99 10 69 chr10 9695034 9695135 -130621630 - L1MA6 LINE L1 -303 5997 5903 2330 110 0 0 chr10 9695529 9695839 -130620926 + AluSg SINE Alu 1 310 0 183 333 0 0 chr10 9695862 9695904 -130620861 + MIR SINE MIR 23 64 -198 254 180 0 33 chr10 9695914 9695975 -130620790 - L1MC4 LINE L1 -1338 6704 6646 289 233 14 31 chr10 9696000 9696287 -130620478 + (TA)n Simple_repeat Simple_repeat 1 282 0 225 0 0 0 chr10 9696566 9696591 -130620174 + (T)n Simple_repeat Simple_repeat 1 25 0 180 77 0 0 chr10 9696892 9696918 -130619847 + (TC)n Simple_repeat Simple_repeat 1 26 0 2024 134 17 0 chr10 9696918 9697209 -130619556 - AluSx SINE Alu -8 304 9 1043 195 93 0 chr10 9698656 9698861 -130617904 + MER1B DNA MER1_type 1 224 -73 235 209 314 0 chr10 9699545 9699631 -130617134 + MIR SINE MIR 128 240 -22 300 266 75 75 chr10 9699740 9699939 -130616826 + MLT1K LTR MaLR 349 547 -41 1798 137 14 0 chr10 9700053 9700357 -130616408 - AluSx SINE Alu 0 308 1 294 316 129 71 chr10 9700455 9700661 -130616104 - L2 LINE L2 -76 3237 3044 2202 126 0 0 chr10 9700661 9700971 -130615794 + AluSx SINE Alu 1 310 -2 294 316 129 71 chr10 9700971 9701160 -130615605 - L2 LINE L2 -269 3044 2819 2163 97 28 3 chr10 9701385 9701675 -130615090 + AluSx SINE Alu 1 297 -15 1917 102 0 4 chr10 9702311 9702565 -130614200 - AluSc SINE Alu -17 292 40 241 238 48 12 chr10 9702711 9702795 -130613970 + L1MC4 LINE L1 6609 6695 -1347 314 296 24 16 chr10 9703364 9703401 -130613364 + CT-rich Low_complexity Low_complexity 4 39 -90 2695 96 3 0 chr10 9703401 9703764 -130613001 + THE1B LTR MaLR 1 364 0 314 296 24 16 chr10 9703764 9703851 -130612914 + CT-rich Low_complexity Low_complexity 39 129 0 878 121 0 7 chr10 9703868 9704017 -130612748 + (TTC)n Simple_repeat Simple_repeat 2 149 0 2150 134 7 0 chr10 9704056 9704363 -130612402 + AluSx SINE Alu 1 309 -3 248 354 53 35 chr10 9704692 9704805 -130611960 - L2 LINE L2 -21 3251 3137 908 211 89 59 chr10 9705053 9705357 -130611408 - MLT1A2 LTR MaLR -61 313 1 869 218 17 6 chr10 9705539 9705713 -130611052 - MER5A DNA MER1_type -5 184 9 960 246 70 32 chr10 9705735 9706080 -130610685 + L1ME3A LINE L1 5805 6162 -8 186 386 31 81 chr10 9706106 9706329 -130610436 - L2 LINE L2 -11 3261 3050 2645 231 62 110 chr10 9707061 9708167 -130608598 - L1MC/D LINE L1 -743 5797 5002 207 0 0 0 chr10 9708167 9708190 -130608575 + (TG)n Simple_repeat Simple_repeat 2 24 0 2645 231 62 110 chr10 9708190 9709072 -130607693 - L1MC/D LINE L1 -1538 5002 4079 221 56 0 28 chr10 9709072 9709108 -130607657 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 7146 23 0 0 chr10 9709108 9709930 -130606835 - L1PA3 LINE L1 -24 6131 5310 * 9994 22 0 0 chr10 9709928 9711106 -130605659 + L1PA3 LINE L1 4125 5302 -844 509 254 55 22 chr10 9711106 9711287 -130605478 - L1MC/D LINE L1 -2449 4091 3905 541 228 17 70 chr10 9711291 9711532 -130605233 - L1MC/D LINE L1 -4809 1731 1504 1274 217 23 23 chr10 9711647 9711946 -130604819 - L1MB8 LINE L1 -9 6169 5871 262 333 0 0 chr10 9712250 9712319 -130604446 - LTR16A LTR ERVL -122 328 260 * 516 208 0 0 chr10 9712318 9712424 -130604341 + Cheshire DNA MER1_type 717 822 -1598 303 273 0 0 chr10 9712456 9712522 -130604243 - Tigger5 DNA MER2_type 0 2323 2258 * 304 146 21 0 chr10 9712518 9712566 -130604199 + Tigger5 DNA MER2_type 2272 2320 -3 * 378 222 0 25 chr10 9712566 9712646 -130604119 - Tigger5 DNA MER2_type -2245 78 1 1047 94 0 0 chr10 9712656 9712815 -130603950 + L1MA8 LINE L1 6130 6288 -3 6576 194 36 12 chr10 9712815 9714266 -130602499 + Cheshire DNA MER1_type 847 2333 -87 270 395 8 0 chr10 9714961 9715080 -130601685 - ERVL LTR ERVL -2263 3501 3382 864 371 89 12 chr10 9715100 9715852 -130600913 - ERVL LTR ERVL -2972 2792 1983 463 139 13 0 chr10 9716073 9716152 -130600613 + MADE1 DNA Mariner 1 80 0 414 0 0 0 chr10 9716341 9716387 -130600378 + (TG)n Simple_repeat Simple_repeat 2 47 0 291 332 88 36 chr10 9716409 9716683 -130600082 - ERVL LTR ERVL -4084 1680 1393 2313 142 81 51 chr10 9717430 9717924 -130598841 - LTR22 LTR ERVK 0 509 1 423 302 85 32 chr10 9718541 9718611 -130598154 - LTR33 LTR ERVL -242 279 214 2048 185 80 74 chr10 9718611 9719162 -130597603 + MLT2B3 LTR ERVL 1 554 0 423 302 85 32 chr10 9719162 9719339 -130597426 - LTR33 LTR ERVL -307 214 19 304 336 79 57 chr10 9719655 9720325 -130596440 + L1MEd LINE L1 100 784 -5335 180 0 0 0 chr10 9722627 9722647 -130594118 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2057 155 3 23 chr10 9723026 9723375 -130593390 - MER7A DNA MER2_type -1 345 6 274 237 40 0 chr10 9724030 9724106 -130592659 + (CATA)n Simple_repeat Simple_repeat 4 82 0 443 166 30 12 chr10 9724107 9724276 -130592489 + (TA)n Simple_repeat Simple_repeat 2 173 0 298 88 77 11 chr10 9726044 9726135 -130590630 + (TA)n Simple_repeat Simple_repeat 2 98 0 269 156 78 7 chr10 9726332 9726486 -130590279 + (TA)n Simple_repeat Simple_repeat 2 166 0 419 130 82 14 chr10 9726521 9726806 -130589959 + (TA)n Simple_repeat Simple_repeat 1 304 0 1076 59 0 0 chr10 9726806 9726941 -130589824 + MER85 DNA T2_type 4 138 -1 279 94 94 0 chr10 9727035 9727131 -130589634 + (TA)n Simple_repeat Simple_repeat 1 105 0 201 343 96 22 chr10 9729521 9729699 -130587066 - L2 LINE L2 -1291 2023 1833 1983 143 7 3 chr10 9729775 9730069 -130586696 + AluSx SINE Alu 1 295 -17 4064 153 20 6 chr10 9730163 9730857 -130585908 - MER50 LTR ERV1 -30 704 1 35 63 0 0 chr10 9731069 9731132 -130585633 + AT_rich Low_complexity Low_complexity 1 63 0 1111 219 29 21 chr10 9731609 9731888 -130584877 + MER89 LTR ERV1 279 559 0 2054 116 7 3 chr10 9731929 9732236 -130584529 + AluSq SINE Alu 1 308 0 1427 201 22 43 chr10 9732488 9732857 -130583908 - MLT1A1 LTR MaLR 0 365 5 515 241 35 14 chr10 9734142 9734287 -130582478 - MIR SINE MIR -6 256 109 233 213 32 32 chr10 9735020 9735114 -130581651 + A-rich Low_complexity Low_complexity 4 97 0 315 309 46 40 chr10 9735611 9735763 -130581002 + HAL1b LINE L1 684 836 -512 1482 279 79 37 chr10 9735841 9736719 -130580046 - L1MEc LINE L1 -3563 2652 1754 1982 148 3 3 chr10 9736719 9737030 -130579735 - AluSx SINE Alu -1 311 1 1482 279 79 37 chr10 9737030 9737320 -130579445 - L1MEc LINE L1 -4461 1754 1477 259 331 47 54 chr10 9737505 9737653 -130579112 - L2 LINE L2 -1 3271 3125 184 109 22 22 chr10 9737930 9737976 -130578789 + A-rich Low_complexity Low_complexity 2 47 0 234 0 0 0 chr10 9738799 9738825 -130577940 + (GA)n Simple_repeat Simple_repeat 1 26 0 1826 122 0 4 chr10 9739005 9739252 -130577513 - AluSg SINE Alu -35 275 30 918 86 0 0 chr10 9739355 9739483 -130577282 - L1PA6 LINE L1 0 6154 6027 413 227 0 24 chr10 9739565 9739708 -130577057 + Tigger5 DNA MER2_type 1 193 -2130 439 189 0 0 chr10 9739711 9739785 -130576980 + Tigger5 DNA MER2_type 2250 2323 0 312 118 0 108 chr10 9740194 9740253 -130576512 + AluSx SINE Alu 1 44 -258 510 46 0 0 chr10 9740253 9740318 -130576447 + (TC)n Simple_repeat Simple_repeat 1 65 0 7448 62 42 2 chr10 9740342 9741012 -130575753 + LTR13 LTR ERVK 1 723 -284 213 39 0 0 chr10 9741012 9741038 -130575727 + (TC)n Simple_repeat Simple_repeat 2 27 0 7448 62 42 2 chr10 9741038 9741335 -130575430 + LTR13 LTR ERVK 723 1007 0 1592 157 4 0 chr10 9741597 9741846 -130574919 + AluSx SINE Alu 61 310 -2 1338 254 11 14 chr10 9741854 9742216 -130574549 + MLT1A1 LTR MaLR 5 365 0 26 0 0 0 chr10 9743513 9743539 -130573226 + AT_rich Low_complexity Low_complexity 1 26 0 966 92 7 7 chr10 9744029 9744170 -130572595 + L1PA11 LINE L1 6031 6171 -3 1333 221 17 20 chr10 9744359 9744653 -130572112 + AluJb SINE Alu 1 293 -19 277 313 55 25 chr10 9745928 9746091 -130570674 - HERVL LTR ERVL -3097 2557 2390 821 156 78 28 chr10 9746303 9746483 -130570282 + MLT1B LTR MaLR 1 189 -201 11675 81 1 19 chr10 9746542 9748105 -130568660 + HERVL-A1 LTR ERVL 4119 5654 0 2917 71 20 8 chr10 9748105 9748499 -130568266 + MLT2A1 LTR ERVL 1 399 -45 333 276 155 30 chr10 9748597 9748862 -130567903 + L1MC5 LINE L1 7627 7924 -37 41 58 0 0 chr10 9749597 9749666 -130567099 + AT_rich Low_complexity Low_complexity 1 69 0 13872 154 16 11 chr10 9749666 9752072 -130564693 + Tigger1 DNA MER2_type 1 2418 0 2310 85 0 3 chr10 9752200 9752493 -130564272 - AluSg SINE Alu -18 292 1 1249 286 167 20 chr10 9752511 9753302 -130563463 + L2 LINE L2 2258 3165 -148 325 301 71 27 chr10 9755661 9755844 -130560921 + MIR SINE MIR 72 262 0 24 0 0 0 chr10 9756594 9756618 -130560147 + AT_rich Low_complexity Low_complexity 1 24 0 608 327 19 56 chr10 9756740 9757116 -130559649 + L1MEc LINE L1 109 470 -5926 350 198 135 10 chr10 9757141 9757237 -130559528 - L1MEc LINE L1 -4623 1773 1666 * 912 225 67 101 chr10 9757234 9757387 -130559378 - L1M4 LINE L1 -912 5234 5077 1987 129 7 3 chr10 9757387 9757674 -130559091 - AluSx SINE Alu -24 288 1 912 225 67 101 chr10 9757674 9758027 -130558738 - L1M4 LINE L1 -1069 5077 4745 443 279 118 42 chr10 9758052 9758289 -130558476 - L1M4 LINE L1 -2800 3346 3092 1065 304 56 20 chr10 9758369 9758981 -130557784 + L1MEc LINE L1 498 1131 -5265 1456 241 98 18 chr10 9758981 9759550 -130557215 - L1M4 LINE L1 -3168 2978 2364 438 302 131 20 chr10 9759740 9760084 -130556681 + L1MEc LINE L1 1220 1601 -4614 41 48 0 0 chr10 9760133 9760195 -130556570 + AT_rich Low_complexity Low_complexity 1 62 0 189 74 0 0 chr10 9760205 9760232 -130556533 + (TAGA)n Simple_repeat Simple_repeat 4 30 0 3935 78 0 4 chr10 9760240 9760753 -130556012 - MER9 LTR ERVK 0 511 1 424 387 30 0 chr10 9761139 9761307 -130555458 + MER115 DNA AcHobo 170 342 -351 563 269 75 0 chr10 9761406 9761566 -130555199 + MER115 DNA AcHobo 522 693 0 26 0 0 0 chr10 9761833 9761859 -130554906 + AT_rich Low_complexity Low_complexity 1 26 0 1654 213 77 0 chr10 9762523 9762899 -130553866 - MER74A LTR ERVL -26 532 128 2125 150 25 11 chr10 9762974 9763333 -130553432 + THE1B LTR MaLR 1 364 0 206 125 0 25 chr10 9764729 9764769 -130551996 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 588 179 0 0 chr10 9766058 9766181 -130550584 - L1MA4 LINE L1 -239 6061 5939 1118 154 21 17 chr10 9766186 9766419 -130550346 + L1MA4 LINE L1 6067 6300 0 2322 125 23 0 chr10 9766577 9766921 -130549844 - THE1B LTR MaLR 0 364 13 204 40 0 0 chr10 9767212 9767237 -130549528 + (TG)n Simple_repeat Simple_repeat 2 26 0 374 349 28 25 chr10 9769620 9769944 -130546821 - L1ME LINE L1 -372 5749 5425 477 252 40 89 chr10 9770533 9770894 -130545871 - MLT2C1 LTR ERVL -43 620 18 1156 164 65 104 chr10 9774186 9774571 -130542194 - LTR25 LTR ERV1 -10 784 415 274 197 136 0 chr10 9774539 9774605 -130542160 - MER51A LTR ERV1 -351 283 209 * 312 235 42 18 chr10 9774772 9774884 -130541881 - MER61E LTR ERV1 -484 85 1 831 239 110 0 chr10 9774964 9775299 -130541466 + Charlie1 DNA MER1_type 2390 2761 0 360 43 0 0 chr10 9775434 9775480 -130541285 + (TG)n Simple_repeat Simple_repeat 2 47 0 244 271 0 0 chr10 9775538 9775597 -130541168 - L2 LINE L2 0 3313 3255 699 230 58 26 chr10 9776042 9776233 -130540532 + MIR SINE MIR 2 198 -64 24 0 0 0 chr10 9776293 9776317 -130540448 + AT_rich Low_complexity Low_complexity 1 24 0 397 282 92 14 chr10 9776483 9776625 -130540140 + L3 LINE CR1 677 829 -748 21 71 0 0 chr10 9777947 9777989 -130538776 + AT_rich Low_complexity Low_complexity 1 42 0 216 67 0 0 chr10 9778280 9778310 -130538455 + (A)n Simple_repeat Simple_repeat 1 30 0 2297 99 0 0 chr10 9778315 9778618 -130538147 + AluSc SINE Alu 1 303 -6 1112 201 68 95 chr10 9779186 9779619 -130537146 + MLT2C2 LTR ERVL 5 425 -39 240 59 0 0 chr10 9779619 9779653 -130537112 + (CA)n Simple_repeat Simple_repeat 1 34 0 1112 201 68 95 chr10 9779653 9779692 -130537073 + MLT2C2 LTR ERVL 425 464 0 1481 125 37 0 chr10 9780258 9780513 -130536252 + AluSx SINE Alu 60 322 0 375 315 108 47 chr10 9782329 9782542 -130534223 + MLT1J LTR MaLR 1 226 -285 3177 272 41 14 chr10 9782720 9784234 -130532531 - L1MEc LINE L1 -2779 3647 2125 616 242 55 16 chr10 9784280 9784462 -130532303 - MER58A DNA MER1_type 0 224 36 247 275 71 71 chr10 9784534 9784745 -130532020 - L1MEc LINE L1 -4738 1688 1478 233 273 30 0 chr10 9784747 9784813 -130531952 + CT-rich Low_complexity Low_complexity 4 71 0 252 300 66 39 chr10 9784813 9785070 -130531695 - L1MEc LINE L1 -4920 2202 1939 758 229 45 14 chr10 9785300 9785523 -130531242 - L1MEc LINE L1 -6168 255 26 247 282 15 38 chr10 9785643 9785774 -130530991 - HAL1 LINE L1 -1352 1155 1028 411 328 53 65 chr10 9786019 9786510 -130530255 - HAL1 LINE L1 -1988 519 35 837 260 32 65 chr10 9787016 9787275 -130529490 - L1ME1 LINE L1 -134 6032 5786 1948 155 57 28 chr10 9787275 9787629 -130529136 + THE1B LTR MaLR 1 364 0 837 260 32 65 chr10 9787629 9787772 -130528993 - L1ME1 LINE L1 -380 5786 5640 189 0 0 0 chr10 9787796 9787817 -130528948 + (T)n Simple_repeat Simple_repeat 1 21 0 658 301 0 19 chr10 9787884 9788097 -130528668 - MER58A DNA MER1_type -8 216 8 328 333 39 8 chr10 9788100 9788229 -130528536 - Zaphod DNA AcHobo -3445 586 454 288 217 0 0 chr10 9788277 9788346 -130528419 + G-rich Low_complexity Low_complexity 1 69 0 1617 309 13 20 chr10 9788474 9789028 -130527737 - Zaphod DNA AcHobo -3480 551 2 280 355 45 27 chr10 9789033 9789253 -130527512 + L2 LINE L2 2684 2907 -407 22 0 0 0 chr10 9790494 9790516 -130526249 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 9791035 9791056 -130525709 + AT_rich Low_complexity Low_complexity 1 21 0 4272 174 66 57 chr10 9791081 9792143 -130524622 + MER11C LTR ERVK 1 1071 0 200 411 9 9 chr10 9792149 9792256 -130524509 + L2 LINE L2 3136 3242 -30 269 294 39 106 chr10 9792280 9792398 -130524367 - MIR SINE MIR -28 234 131 1995 132 20 0 chr10 9792398 9792694 -130524071 + AluSx SINE Alu 1 302 -10 269 294 39 106 chr10 9792694 9792755 -130524010 - MIR SINE MIR -131 131 67 27 0 0 0 chr10 9793012 9793039 -130523726 + AT_rich Low_complexity Low_complexity 1 27 0 188 67 33 0 chr10 9794173 9794203 -130522562 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 811 286 83 35 chr10 9794673 9795151 -130521614 - L1ME1 LINE L1 0 6166 5629 25 31 0 0 chr10 9795439 9795471 -130521294 + AT_rich Low_complexity Low_complexity 1 32 0 291 282 28 0 chr10 9795842 9795913 -130520852 - MIR3 SINE MIR -6 202 130 22 35 0 0 chr10 9796308 9796337 -130520428 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 9796641 9796662 -130520103 + AT_rich Low_complexity Low_complexity 1 21 0 344 289 21 72 chr10 9797480 9797674 -130519091 - L1ME3A LINE L1 -18 6152 5969 2019 136 0 17 chr10 9797679 9797981 -130518784 + AluSx SINE Alu 7 303 -9 927 305 103 25 chr10 9798068 9799061 -130517704 - L1ME3A LINE L1 -202 5960 4896 360 207 0 0 chr10 9799365 9799423 -130517342 - AluJ/FRAM SINE Alu -13 289 232 843 144 8 0 chr10 9799431 9799556 -130517209 - AluJb SINE Alu -186 126 1 567 308 87 61 chr10 9799558 9800510 -130516255 - L1ME3A LINE L1 -1587 4559 3566 1398 283 32 20 chr10 9800510 9801009 -130515756 + MLT1D LTR MaLR 1 505 0 567 308 87 61 chr10 9801009 9801302 -130515463 - L1ME3A LINE L1 -2580 3566 3282 290 325 9 0 chr10 9801654 9801768 -130514997 + L1M4 LINE L1 4052 4166 -1980 25 83 0 0 chr10 9801894 9801954 -130514811 + AT_rich Low_complexity Low_complexity 1 60 0 542 324 110 39 chr10 9801968 9801990 -130514775 + L1M4 LINE L1 4390 4409 -1737 1749 189 9 3 chr10 9801990 9802329 -130514436 + L1MC1 LINE L1 5980 6320 -13 542 324 110 39 chr10 9802329 9802899 -130513866 + L1M4 LINE L1 4409 5024 -1122 2455 71 0 7 chr10 9802934 9803243 -130513522 + AluY SINE Alu 1 307 -4 417 169 331 0 chr10 9803259 9803395 -130513370 + L1MB7 LINE L1 2334 2514 -3632 4600 209 33 38 chr10 9803413 9805594 -130511171 + L1MB7 LINE L1 4005 6165 -19 363 338 29 7 chr10 9805990 9806129 -130510636 - MIR SINE MIR -114 148 7 25 0 0 0 chr10 9806975 9807000 -130509765 + AT_rich Low_complexity Low_complexity 1 25 0 208 200 22 0 chr10 9808069 9808114 -130508651 + (TAA)n Simple_repeat Simple_repeat 1 46 0 369 350 54 8 chr10 9810274 9810514 -130506251 + MLT1L LTR MaLR 357 607 -8 2576 164 9 2 chr10 9810571 9811011 -130505754 + L1MC1 LINE L1 5356 5798 -535 312 87 0 0 chr10 9811196 9811242 -130505523 + L1MC1 LINE L1 5816 5861 -483 2203 173 30 49 chr10 9811298 9811771 -130504994 + L1MC1 LINE L1 5870 6333 0 1375 175 110 7 chr10 9811781 9812089 -130504676 - MER2 DNA MER2_type -4 340 1 1131 190 26 8 chr10 9812089 9812348 -130504417 + L1MB2 LINE L1 5903 6169 -2 254 215 15 0 chr10 9812349 9812414 -130504351 + (TA)n Simple_repeat Simple_repeat 1 66 0 761 179 8 0 chr10 9812508 9812642 -130504123 - AluSq/x SINE Alu -167 146 12 275 201 160 104 chr10 9812643 9812787 -130503978 + LTR16C LTR ERVL 332 483 -8 1617 191 133 39 chr10 9813706 9813876 -130502889 - MLT1D LTR MaLR -2 503 350 2697 10 0 0 chr10 9813876 9814175 -130502590 - AluYa5 SINE Alu -12 299 1 1617 191 133 39 chr10 9814175 9814464 -130502301 - MLT1D LTR MaLR -155 350 1 292 274 24 0 chr10 9814513 9814597 -130502168 - LTR33 LTR ERVL -10 511 426 2229 115 0 0 chr10 9816332 9816636 -130500129 + AluSx SINE Alu 2 305 -7 654 309 70 8 chr10 9817031 9817274 -130499491 - MLT1J LTR MaLR -210 301 44 8075 181 51 18 chr10 9817789 9818333 -130498432 + Tigger1 DNA MER2_type 1 526 -1892 1559 125 13 0 chr10 9818333 9818565 -130498200 + AluSg/x SINE Alu 67 301 -11 8075 181 51 18 chr10 9818565 9819702 -130497063 + Tigger1 DNA MER2_type 526 1737 -681 1877 72 4 0 chr10 9819702 9819939 -130496826 + L1P4 LINE L1 5443 5680 -488 8521 38 0 0 chr10 9820094 9821883 -130494882 - L1PA4 LINE L1 -1 6154 4351 3889 32 0 0 chr10 9821883 9822347 -130494418 + L1PA4 LINE L1 3884 4347 -1799 28 29 0 0 chr10 9822502 9822537 -130494228 + AT_rich Low_complexity Low_complexity 1 35 0 247 195 52 0 chr10 9822611 9822688 -130494077 + L1MC4 LINE L1 1478 1558 -5301 * 925 311 73 38 chr10 9822675 9823514 -130493251 + L1MC4 LINE L1 2171 3038 -4100 * 1644 74 0 0 chr10 9823513 9823728 -130493037 + L1P LINE L1 4745 4959 -1187 521 249 101 0 chr10 9823744 9823933 -130492832 + L1MC4 LINE L1 5473 5680 -1277 689 65 65 9 chr10 9824150 9824257 -130492508 + L1PA14 LINE L1 6044 6156 -5 266 212 15 0 chr10 9824270 9824336 -130492429 - Tigger1 DNA MER2_type -2351 67 1 2023 257 50 14 chr10 9824352 9824999 -130491766 + L1MC4 LINE L1 6107 6776 -2077 207 114 0 0 chr10 9825031 9825066 -130491699 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 497 268 146 7 chr10 9825083 9825370 -130491395 + L1MEc LINE L1 1914 2240 -4156 599 274 124 17 chr10 9825381 9825622 -130491143 + L1M4b LINE L1 18 284 -6575 316 277 11 119 chr10 9825746 9826006 -130490759 + L1M4b LINE L1 994 1225 -5634 1567 259 74 45 chr10 9826258 9826828 -130489937 + L1M4b LINE L1 2512 3064 -3893 1936 139 0 32 chr10 9826828 9827137 -130489628 + AluSx SINE Alu 1 299 -13 1567 259 74 45 chr10 9827137 9827786 -130488979 + L1M4b LINE L1 3064 3743 -3214 2056 116 0 0 chr10 9827787 9828064 -130488701 + AluSx SINE Alu 1 277 -35 825 340 49 29 chr10 9828190 9828643 -130488122 - LTR16B LTR ERVL 0 464 3 485 285 51 19 chr10 9828651 9828865 -130487900 - L1MEc LINE L1 -3549 2666 2446 2034 293 69 52 chr10 9828903 9829848 -130486917 - L1MEc LINE L1 -3976 2420 1493 192 77 0 0 chr10 9829848 9829874 -130486891 + (TG)n Simple_repeat Simple_repeat 2 27 0 2034 293 69 52 chr10 9829874 9831299 -130485466 - L1MEc LINE L1 -4903 1493 14 269 241 12 24 chr10 9831277 9831360 -130485405 + L1MC/D LINE L1 5705 5786 -2022 * 212 208 19 0 chr10 9831522 9831575 -130485190 + (TA)n Simple_repeat Simple_repeat 1 54 0 24 53 0 0 chr10 9833459 9833497 -130483268 + AT_rich Low_complexity Low_complexity 1 38 0 937 195 0 0 chr10 9834475 9834629 -130482136 + AluJb SINE Alu 133 286 -26 191 363 96 19 chr10 9835166 9835323 -130481442 + MIR3 SINE MIR 33 201 -7 279 71 0 0 chr10 9835562 9835604 -130481161 + (TG)n Simple_repeat Simple_repeat 2 43 0 21 82 0 0 chr10 9835866 9835915 -130480850 + AT_rich Low_complexity Low_complexity 1 49 0 1510 188 91 0 chr10 9836615 9836934 -130479831 + MER7A DNA MER2_type 1 346 0 680 303 90 34 chr10 9837062 9837329 -130479436 + LTR16C LTR ERVL 67 348 -143 29 0 0 0 chr10 9837329 9837358 -130479407 + AT_rich Low_complexity Low_complexity 1 29 0 1455 174 37 58 chr10 9837367 9837661 -130479104 - AluJo SINE Alu -24 288 1 2125 117 3 0 chr10 9837672 9837962 -130478803 - AluSp SINE Alu -11 302 12 250 218 148 92 chr10 9837963 9838105 -130478660 + LTR16C LTR ERVL 332 481 -10 911 233 110 0 chr10 9838549 9838841 -130477924 - MER33 DNA MER1_type 0 324 1 293 250 11 0 chr10 9839276 9839368 -130477397 + (CATATA)n Simple_repeat Simple_repeat 2 94 0 225 211 0 0 chr10 9839522 9839574 -130477191 + (TA)n Simple_repeat Simple_repeat 2 53 0 236 281 49 0 chr10 9839584 9839666 -130477099 - L1MC4 LINE L1 -1343 6699 6614 219 298 0 0 chr10 9839683 9839767 -130476998 + (TA)n Simple_repeat Simple_repeat 1 84 0 274 388 39 0 chr10 9839828 9839931 -130476834 - MIR SINE MIR -83 125 19 189 0 0 0 chr10 9840245 9840266 -130476499 + (CA)n Simple_repeat Simple_repeat 1 21 0 288 0 0 0 chr10 9840976 9841008 -130475757 + (GA)n Simple_repeat Simple_repeat 1 32 0 2165 98 0 7 chr10 9841630 9841939 -130474826 + AluSg SINE Alu 1 310 0 2483 80 0 3 chr10 9842418 9842756 -130474009 - L1PA13 LINE L1 -250 5913 5577 1664 83 0 0 chr10 9842756 9842982 -130473783 + L1PA13 LINE L1 5920 6147 -16 361 19 57 0 chr10 9844088 9844141 -130472624 + (TCTA)n Simple_repeat Simple_repeat 3 58 0 2175 216 31 72 chr10 9845203 9845841 -130470924 - LTR9 LTR ERV1 0 612 1 2605 157 71 39 chr10 9846244 9846778 -130469987 - MER39 LTR ERV1 -2 705 155 2078 117 7 0 chr10 9847567 9847881 -130468884 + AluSx SINE Alu 1 312 0 437 224 93 100 chr10 9849549 9849758 -130467007 - MIR SINE MIR -9 253 42 612 101 0 0 chr10 9850276 9850365 -130466400 + (GGAA)n Simple_repeat Simple_repeat 2 90 0 25 0 0 0 chr10 9850514 9850539 -130466226 + AT_rich Low_complexity Low_complexity 1 25 0 239 29 57 0 chr10 9850824 9850859 -130465906 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1919 109 7 4 chr10 9850868 9851142 -130465623 - AluSx SINE Alu -37 275 1 2205 78 0 3 chr10 9851673 9851975 -130464790 - AluSg SINE Alu 0 301 1 180 0 0 0 chr10 9853341 9853361 -130463404 + (TA)n Simple_repeat Simple_repeat 2 21 0 409 328 126 8 chr10 9853550 9853812 -130462953 + L1M4 LINE L1 4069 4361 -1785 304 267 97 48 chr10 9854073 9854238 -130462527 + L1M4 LINE L1 4492 4664 -1482 225 240 0 0 chr10 9854321 9854371 -130462394 + L1M4 LINE L1 4797 4846 -1300 272 317 94 15 chr10 9854396 9854737 -130462028 + L1M4 LINE L1 4903 5270 -876 30 45 0 0 chr10 9854755 9854799 -130461966 + AT_rich Low_complexity Low_complexity 1 44 0 437 332 85 5 chr10 9855635 9855858 -130460907 - L2 LINE L2 -637 2677 2437 472 155 29 0 chr10 9856000 9856103 -130460662 + GA-rich Low_complexity Low_complexity 1 106 0 256 116 0 23 chr10 9856110 9856153 -130460612 + (GAAA)n Simple_repeat Simple_repeat 1 42 0 1482 183 27 83 chr10 9857101 9857209 -130459556 + MLT1B LTR MaLR 1 114 -276 196 29 29 29 chr10 9857209 9857243 -130459522 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2091 108 0 11 chr10 9857245 9857531 -130459234 - AluSx SINE Alu -29 283 1 1482 183 27 83 chr10 9857531 9857828 -130458937 + MLT1B LTR MaLR 115 386 -4 384 209 216 20 chr10 9858311 9858464 -130458301 - LTR41 LTR ERVL -590 183 1 2905 107 5 2 chr10 9858973 9859403 -130457362 - L1PB2 LINE L1 -2 6149 5719 2827 7 0 0 chr10 9859740 9860046 -130456719 - AluYb8 SINE Alu -12 306 1 44384 37 1 1 chr10 9860188 9866339 -130450426 + L1PA3 LINE L1 7 6152 -3 207 69 0 0 chr10 9866393 9866422 -130450343 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 1937 121 37 4 chr10 9867915 9868217 -130448548 - AluY SINE Alu 0 313 3 205 283 121 50 chr10 9868676 9868775 -130447990 - L2 LINE L2 0 3313 3208 790 235 25 126 chr10 9868906 9869311 -130447454 - MLT1A1 LTR MaLR 0 365 2 310 255 83 45 chr10 9869908 9870065 -130446700 + MIR SINE MIR 95 257 -5 4823 160 14 6 chr10 9870102 9870981 -130445784 + L1PB4 LINE L1 5268 6153 -3 371 259 0 82 chr10 9871118 9871265 -130445500 - L2 LINE L2 0 3313 3179 184 91 45 0 chr10 9871452 9871496 -130445269 + A-rich Low_complexity Low_complexity 2 47 0 890 188 19 0 chr10 9871526 9871686 -130445079 + MER5A DNA MER1_type 3 165 -24 1950 140 42 50 chr10 9871859 9872237 -130444528 - THE1C LTR MaLR 0 375 1 1425 240 31 11 chr10 9872434 9872792 -130443973 + MLT1A1 LTR MaLR 1 365 0 243 0 0 0 chr10 9872860 9872887 -130443878 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 587 256 59 102 chr10 9873037 9873291 -130443474 - MLT1G LTR MaLR -334 256 14 324 318 46 59 chr10 9873334 9873573 -130443192 - MLT1G-int LTR MaLR -22 1349 1114 288 303 30 20 chr10 9874353 9874452 -130442313 - MLT1G-int LTR MaLR -879 492 393 571 138 121 0 chr10 9874883 9874999 -130441766 - AluJb SINE Alu 0 312 183 1603 166 0 0 chr10 9874999 9875246 -130441519 - AluSx SINE Alu -65 247 1 378 308 85 61 chr10 9875962 9876347 -130440418 + L2 LINE L2 2616 3004 -268 721 153 0 0 chr10 9876360 9876478 -130440287 + AluJb SINE Alu 190 307 -5 1060 219 32 19 chr10 9876483 9876922 -130439843 + L1M3 LINE L1 4959 5443 -737 * 3454 183 18 37 chr10 9876909 9877697 -130439068 - L1MB1 LINE L1 -146 6043 5271 489 315 82 7 chr10 9877943 9878089 -130438676 + MER91A DNA MER1_type 30 186 -10 1258 197 15 19 chr10 9878187 9878456 -130438309 - MER65A LTR ERV1 0 445 178 462 221 13 6 chr10 9878458 9878616 -130438149 + (TA)n Simple_repeat Simple_repeat 2 160 0 721 118 146 21 chr10 9878627 9878771 -130437994 - MER65B LTR ERV1 -369 162 1 4882 248 87 43 chr10 9878771 9880476 -130436289 - MER65B-int LTR ERV1 0 4871 3092 5844 74 4 4 chr10 9880482 9881251 -130435514 - L1PA8 LINE L1 -2 6170 5402 4199 82 11 0 chr10 9881243 9881866 -130434899 + L1P LINE L1 4798 5424 -730 * 1331 216 113 94 chr10 9881874 9883440 -130433325 - MER65A-int LTR ERV1 -1475 4856 3242 2069 107 4 0 chr10 9883440 9883744 -130433021 - AluSc SINE Alu 0 306 2 1331 216 113 94 chr10 9883744 9883840 -130432925 - MER65A-int LTR ERV1 -3089 3242 3149 385 225 62 73 chr10 9883836 9884014 -130432751 - MER65A-int LTR ERV1 -6399 1721 1546 * 22 0 0 0 chr10 9884075 9884097 -130432668 + AT_rich Low_complexity Low_complexity 1 22 0 7797 205 66 57 chr10 9884125 9884844 -130431921 - MER65A-int LTR ERV1 -2377 2494 1783 333 0 0 0 chr10 9884844 9884881 -130431884 + (CA)n Simple_repeat Simple_repeat 2 38 0 7797 205 66 57 chr10 9884881 9886579 -130430186 - MER65A-int LTR ERV1 -3088 1783 54 1986 212 28 21 chr10 9886639 9886901 -130429864 - MER65A LTR ERV1 -8 437 169 357 62 0 0 chr10 9886901 9886949 -130429816 + (TG)n Simple_repeat Simple_repeat 2 49 0 1986 212 28 21 chr10 9886949 9887120 -130429645 - MER65A LTR ERV1 -276 169 1 21 36 0 0 chr10 9889423 9889451 -130427314 + AT_rich Low_complexity Low_complexity 1 28 0 1774 176 36 6 chr10 9890235 9890570 -130426195 - L1MC1 LINE L1 -6 6327 5983 390 271 43 7 chr10 9890804 9890944 -130425821 + L1ME LINE L1 213 357 -6206 * 1607 283 90 41 chr10 9890942 9892207 -130424558 + L1MEc LINE L1 1119 2665 -3717 2283 96 0 31 chr10 9892207 9892530 -130424235 + AluSq SINE Alu 1 313 0 1607 283 90 41 chr10 9892530 9893309 -130423456 + L1MEc LINE L1 2665 3404 -2978 2257 70 0 3 chr10 9893317 9893603 -130423162 + AluY SINE Alu 1 285 -26 504 77 0 0 chr10 9893605 9893683 -130423082 + (ACATG)n Simple_repeat Simple_repeat 1 78 0 402 269 154 10 chr10 9893683 9893891 -130422874 + L1MEc LINE L1 3347 3584 -2798 730 267 82 41 chr10 9893953 9894365 -130422400 + L1M4 LINE L1 4518 4946 -1200 256 341 14 0 chr10 9894527 9894665 -130422100 + (TCTA)n Simple_repeat Simple_repeat 3 142 0 2368 147 20 0 chr10 9894665 9895060 -130421705 - MER57A LTR ERV1 0 403 1 1174 123 9 66 chr10 9895175 9895386 -130421379 - AluSg/x SINE Alu -2 308 110 567 291 12 0 chr10 9895487 9895652 -130421113 + MIR SINE MIR 84 250 -12 345 279 66 22 chr10 9896058 9896194 -130420571 + MIR SINE MIR 118 259 -3 539 309 22 26 chr10 9898546 9898818 -130417947 + L1ME LINE L1 546 816 -5556 * 1032 306 82 48 chr10 9898808 9900152 -130416613 - L1M4 LINE L1 -1150 4996 3607 215 190 20 20 chr10 9900284 9900384 -130416381 + (TA)n Simple_repeat Simple_repeat 1 100 0 1727 202 11 22 chr10 9900420 9900787 -130415978 - MLT2D LTR ERVL -51 363 1 5209 142 33 5 chr10 9900918 9901797 -130414968 - L1PA16 LINE L1 -9 6157 5254 1885 224 37 35 chr10 9901812 9902351 -130414414 - L1 LINE L1 -1550 4596 4057 * 5044 223 24 9 chr10 9902338 9903599 -130413166 + L1 LINE L1 2975 4253 -1893 555 207 17 0 chr10 9903586 9903702 -130413063 + L1P LINE L1 3949 4066 -2080 * 329 314 111 49 chr10 9903767 9904343 -130412422 - HAL1b LINE L1 -505 843 232 26 30 0 0 chr10 9905359 9905392 -130411373 + AT_rich Low_complexity Low_complexity 1 33 0 303 373 8 15 chr10 9905552 9905611 -130411154 - L1MEc LINE L1 -4270 2126 2068 180 111 0 0 chr10 9905611 9905638 -130411127 + (TG)n Simple_repeat Simple_repeat 2 28 0 303 373 8 15 chr10 9905638 9905712 -130411053 - L1MEc LINE L1 -4328 2068 1994 809 289 42 42 chr10 9905831 9906360 -130410405 - L1MEc LINE L1 -4438 1958 1430 456 351 46 28 chr10 9906897 9907222 -130409543 - L1MEc LINE L1 -6030 366 36 2119 175 117 44 chr10 9907243 9907635 -130409130 - MLT2B1 LTR ERVL 0 520 85 1654 169 3 44 chr10 9907635 9907954 -130408811 + AluSx SINE Alu 7 312 0 2119 175 117 44 chr10 9907954 9908041 -130408724 - MLT2B1 LTR ERVL -435 85 6 187 353 9 86 chr10 9908142 9908258 -130408507 - L2 LINE L2 -19 3253 3147 188 273 286 0 chr10 9908493 9908570 -130408195 + MIR SINE MIR 158 256 -6 1413 228 26 37 chr10 9909996 9910373 -130406392 + MLT2D LTR ERVL 1 373 -41 1003 198 100 55 chr10 9910647 9910976 -130405789 - MER2 DNA MER2_type 0 344 1 217 280 0 21 chr10 9912229 9912322 -130404443 + A-rich Low_complexity Low_complexity 5 95 0 1548 205 99 0 chr10 9913426 9913653 -130403112 - MLT1A1 LTR MaLR 0 365 93 1437 220 42 14 chr10 9913653 9914008 -130402757 + MLT1A1 LTR MaLR 1 365 0 1548 205 99 0 chr10 9914008 9914112 -130402653 - MLT1A1 LTR MaLR -272 93 1 579 286 93 20 chr10 9914871 9915094 -130401671 + L1ME3A LINE L1 5541 5746 -424 1666 187 10 7 chr10 9915094 9915388 -130401377 + AluJo SINE Alu 1 295 -17 579 286 93 20 chr10 9915388 9915562 -130401203 + L1ME3A LINE L1 5746 5967 -203 1808 180 3 0 chr10 9916751 9917051 -130399714 + AluJb SINE Alu 2 302 -10 13621 26 0 2 chr10 9917758 9919462 -130397303 - L1PA3 LINE L1 -680 5475 3775 6099 13 1 0 chr10 9919462 9920156 -130396609 + L1PA3 LINE L1 5459 6155 0 205 89 78 22 chr10 9920605 9920695 -130396070 + (TATAA)n Simple_repeat Simple_repeat 5 99 0 415 325 32 4 chr10 9922349 9922598 -130394167 + L1MEc LINE L1 1229 1484 -4912 21 0 0 0 chr10 9922602 9922623 -130394142 + AT_rich Low_complexity Low_complexity 1 21 0 6973 64 4 2 chr10 9922623 9924308 -130392457 - L1PA7 LINE L1 -11 6143 4457 305 191 36 48 chr10 9924323 9924407 -130392358 - L1M4 LINE L1 -3951 2195 2113 938 117 0 0 chr10 9924417 9924545 -130392220 - AluSq/x SINE Alu -180 133 6 455 165 0 0 chr10 9924549 9924628 -130392137 - Tigger1 DNA MER2_type -503 1915 1837 6865 156 33 3 chr10 9924638 9925466 -130391299 - Tigger1 DNA MER2_type -1209 1209 333 213 39 0 0 chr10 9925466 9925492 -130391273 + (GA)n Simple_repeat Simple_repeat 1 26 0 6865 156 33 3 chr10 9925492 9925836 -130390929 - Tigger1 DNA MER2_type -2085 333 1 323 303 80 74 chr10 9926231 9926555 -130390210 - L1M4 LINE L1 -2329 3817 3492 1258 156 30 82 chr10 9926576 9926845 -130389920 - Tigger1 DNA MER2_type -1920 498 244 2112 238 57 52 chr10 9926933 9928628 -130388137 + L1ME1 LINE L1 114 2015 -4549 1703 225 20 6 chr10 9928630 9928985 -130387780 - MLT1A1 LTR MaLR -2 363 4 21 0 0 0 chr10 9928988 9929009 -130387756 + AT_rich Low_complexity Low_complexity 1 21 0 734 268 71 11 chr10 9929129 9929509 -130387256 + L1ME1 LINE L1 2191 2593 -3971 2053 100 7 0 chr10 9929511 9929782 -130386983 + AluSc SINE Alu 19 291 -18 349 281 123 79 chr10 9929808 9930263 -130386502 - HAL1 LINE L1 -1088 1419 945 1492 208 18 3 chr10 9930270 9930554 -130386211 - AluJb SINE Alu -24 288 1 2799 10 0 0 chr10 9930779 9931087 -130385678 + AluYa5 SINE Alu 1 308 -3 203 315 63 75 chr10 9932005 9932185 -130384580 - MIR SINE MIR -34 174 45 2185 164 55 26 chr10 9933692 9934112 -130382653 + Tigger2a DNA MER2_type 3 434 0 954 196 122 86 chr10 9934171 9934507 -130382258 + MLT1B LTR MaLR 43 390 0 2302 263 88 13 chr10 9934525 9936334 -130380431 + L1ME1 LINE L1 4640 6580 -4 189 74 0 0 chr10 9936340 9936367 -130380398 + (A)n Simple_repeat Simple_repeat 1 27 0 203 179 15 60 chr10 9936375 9936442 -130380323 + T-rich Low_complexity Low_complexity 3 66 0 932 339 102 28 chr10 9936469 9936760 -130380005 - L2 LINE L2 -54 3259 2991 1890 190 11 6 chr10 9936760 9937123 -130379642 + MLT1A1 LTR MaLR 1 365 0 932 339 102 28 chr10 9937123 9937586 -130379179 - L2 LINE L2 -322 2991 2425 2029 102 3 66 chr10 9938008 9938340 -130378425 + AluSp SINE Alu 1 311 -2 470 279 32 93 chr10 9940043 9940355 -130376410 + MLT1I LTR MaLR 99 391 -18 21 100 0 0 chr10 9940948 9941018 -130375747 + AT_rich Low_complexity Low_complexity 1 70 0 917 130 0 0 chr10 9941631 9941762 -130375003 - FLAM_C SINE Alu -2 131 1 327 336 37 30 chr10 9942001 9942135 -130374630 + MIR SINE MIR 17 151 -111 474 18 0 0 chr10 9942274 9942329 -130374436 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 236 302 0 0 chr10 9942398 9942484 -130374281 - L1MC4 LINE L1 -1342 6700 6615 294 106 0 0 chr10 9942484 9942531 -130374234 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 21 0 0 0 chr10 9942648 9942669 -130374096 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr10 9943577 9943608 -130373157 + AT_rich Low_complexity Low_complexity 1 31 0 1641 262 134 65 chr10 9945191 9946235 -130370530 + L1MC4a LINE L1 5520 6660 -1148 2502 74 0 0 chr10 9946235 9946546 -130370219 + AluY SINE Alu 1 311 0 1641 262 134 65 chr10 9946546 9946709 -130370056 + L1MC4a LINE L1 6660 6810 -998 834 198 0 0 chr10 9946714 9946891 -130369874 + GA-rich Low_complexity Low_complexity 1 177 0 424 273 148 53 chr10 9946903 9947431 -130369334 + L1MC4 LINE L1 6926 7503 -539 255 355 82 24 chr10 9947614 9947855 -130368910 - L2 LINE L2 -228 3085 2767 21 57 0 0 chr10 9948314 9948349 -130368416 + AT_rich Low_complexity Low_complexity 1 35 0 315 263 13 0 chr10 9950591 9950667 -130366098 + MLT1A2 LTR MaLR 254 330 -44 4135 142 32 17 chr10 9950677 9951861 -130364904 - Tigger1 DNA MER2_type -1117 1301 5 4603 233 33 38 chr10 9951993 9953522 -130363243 + L1MB7 LINE L1 3689 5225 -959 2733 16 0 10 chr10 9953522 9953834 -130362931 + AluYb8 SINE Alu 1 309 -9 4603 233 33 38 chr10 9953834 9954483 -130362282 + L1MB7 LINE L1 5225 5846 -338 2263 138 28 0 chr10 9954483 9954837 -130361928 + THE1B LTR MaLR 1 364 0 4603 233 33 38 chr10 9954837 9955164 -130361601 + L1MB7 LINE L1 5846 6173 -11 513 180 0 40 chr10 9955320 9955420 -130361345 + MLT1B LTR MaLR 3 98 -292 256 89 89 0 chr10 9955411 9955456 -130361309 - MADE1 DNA Mariner -31 49 1 * 2871 165 20 60 chr10 9955456 9955939 -130360826 + LTR9 LTR ERV1 1 455 -157 444 19 0 0 chr10 9955939 9955992 -130360773 + (TC)n Simple_repeat Simple_repeat 1 53 0 2871 165 20 60 chr10 9955992 9956145 -130360620 + LTR9 LTR ERV1 455 612 0 26 98 0 0 chr10 9956826 9956908 -130359857 + AT_rich Low_complexity Low_complexity 1 82 0 288 324 85 28 chr10 9957043 9957219 -130359546 - MIR SINE MIR -72 190 5 1828 170 0 0 chr10 9957560 9957872 -130358893 - AluJo SINE Alu 0 312 1 1871 204 68 70 chr10 9957962 9958517 -130358248 - MLT2B3 LTR ERVL 0 554 1 2845 167 22 18 chr10 9958620 9959170 -130357595 + MER39B LTR ERV1 102 653 0 310 296 44 30 chr10 9959170 9959305 -130357460 + L1M4 LINE L1 4905 5041 -1105 331 199 24 65 chr10 9959358 9959491 -130357274 + L1M4 LINE L1 5171 5295 -851 295 311 180 19 chr10 9959514 9959675 -130357090 + MIR SINE MIR 51 237 -25 391 349 48 4 chr10 9959729 9959958 -130356807 + L3 LINE CR1 1215 1453 -124 240 354 0 0 chr10 9960162 9960241 -130356524 + L3 LINE CR1 1489 1567 -10 1982 184 26 16 chr10 9962632 9963017 -130353748 - LTR45B LTR ERV1 -97 392 4 299 323 23 15 chr10 9964519 9964649 -130352116 - MLT1F1-int LTR MaLR -549 822 692 728 266 30 69 chr10 9964898 9965042 -130351723 - MLT1F1-int LTR MaLR -760 611 463 2136 97 4 0 chr10 9965042 9965360 -130351405 + AluSq SINE Alu 5 323 0 728 266 30 69 chr10 9965360 9965549 -130351216 - MLT1F1-int LTR MaLR -908 463 290 276 274 145 16 chr10 9965575 9965699 -130351066 - MLT1F1-int LTR MaLR -1229 142 3 533 306 55 74 chr10 9965727 9966060 -130350705 - MLT1F1 LTR MaLR -60 531 186 1860 151 3 3 chr10 9966060 9966411 -130350354 - AluSc SINE Alu 0 309 1 533 306 55 74 chr10 9966411 9966594 -130350171 - MLT1F1 LTR MaLR -405 186 1 646 309 13 91 chr10 9966599 9967149 -130349616 - L1ME3A LINE L1 -213 5957 5451 478 300 100 91 chr10 9967151 9967771 -130348994 - L2 LINE L2 -5 3308 2670 1216 350 131 36 chr10 9967777 9969476 -130347289 - L2 LINE L2 -1093 2221 363 1929 143 0 7 chr10 9969877 9970171 -130346594 - AluSx SINE Alu -20 292 1 22 0 0 0 chr10 9971824 9971846 -130344919 + AT_rich Low_complexity Low_complexity 1 22 0 409 341 15 0 chr10 9972370 9972505 -130344260 + MIR SINE MIR 12 148 -114 324 346 59 0 chr10 9972862 9972998 -130343767 - MLT2E LTR ERVL -453 175 32 1523 178 117 38 chr10 9973377 9973770 -130342995 - MSTC LTR MaLR -4 424 1 471 316 83 9 chr10 9974081 9974299 -130342466 + MIR SINE MIR 2 235 -27 747 160 73 0 chr10 9976077 9976227 -130340538 - L1MB3 LINE L1 -38 6145 5985 420 262 5 2 chr10 9976225 9976335 -130340430 - L1ME3A LINE L1 -758 5422 5311 * 50 71 0 0 chr10 9976485 9976584 -130340181 + AT_rich Low_complexity Low_complexity 1 99 0 249 264 27 9 chr10 9976708 9976818 -130339947 + L1M4 LINE L1 2903 3014 -3132 394 271 128 53 chr10 9976981 9977302 -130339463 + L1MCc LINE L1 91 435 -5988 1510 291 67 30 chr10 9977501 9978759 -130338006 + L1MCc LINE L1 798 2107 -4834 264 100 0 0 chr10 9978788 9978828 -130337937 + (CA)n Simple_repeat Simple_repeat 2 41 0 369 348 62 25 chr10 9978841 9979194 -130337571 - L1MEc LINE L1 -5954 442 77 23 33 0 0 chr10 9979305 9979335 -130337430 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr10 9980171 9980207 -130336558 + AT_rich Low_complexity Low_complexity 1 36 0 246 336 64 36 chr10 9981630 9981740 -130335025 + L2 LINE L2 3155 3267 -5 462 61 0 0 chr10 9982642 9982708 -130334057 + (CA)n Simple_repeat Simple_repeat 2 67 0 1680 269 108 29 chr10 9982754 9983708 -130333057 - L1ME3A LINE L1 -1333 4813 3785 1158 231 141 104 chr10 9983708 9984197 -130332568 + MER39 LTR ERV1 8 682 -25 922 265 94 52 chr10 9984207 9985076 -130331689 - L1ME3A LINE L1 -2351 3795 2869 30 0 0 0 chr10 9985838 9985868 -130330897 + AT_rich Low_complexity Low_complexity 1 30 0 1558 206 7 0 chr10 9985926 9986236 -130330529 - AluSx SINE Alu 0 312 1 3914 221 43 39 chr10 9986443 9986928 -130329837 + L1MC3 LINE L1 5123 5604 -542 1705 156 46 38 chr10 9986928 9987300 -130329465 + THE1C LTR MaLR 1 375 0 3914 221 43 39 chr10 9987300 9987967 -130328798 + L1MC3 LINE L1 5604 5250 -896 675 156 0 0 chr10 9987967 9988089 -130328676 + L1PA15 LINE L1 6041 6162 -3 3914 221 43 39 chr10 9988089 9988244 -130328521 + L1MC3 LINE L1 5249 5402 -744 2763 201 100 50 chr10 9988233 9989110 -130327655 + L1MC3 LINE L1 6840 7760 -25 * 505 544 5 10 chr10 9989108 9989314 -130327451 + L1PA5 LINE L1 5950 6154 0 * 52 17 0 0 chr10 9989320 9989379 -130327386 + AT_rich Low_complexity Low_complexity 1 59 0 350 270 51 67 chr10 9989420 9989823 -130326942 - L1MCa LINE L1 -4779 1942 1347 386 248 263 28 chr10 9989864 9990187 -130326578 - L1MCa LINE L1 -5077 1453 1055 2005 126 84 18 chr10 9990194 9990527 -130326238 - THE1C LTR MaLR 0 375 21 333 47 0 0 chr10 9991133 9991176 -130325589 + (TG)n Simple_repeat Simple_repeat 1 43 0 357 149 0 0 chr10 9991176 9991243 -130325522 - MER41A LTR ERV1 -93 461 395 279 0 0 0 chr10 9992301 9992332 -130324433 + (CA)n Simple_repeat Simple_repeat 2 32 0 221 214 36 0 chr10 9992532 9992588 -130324177 - L2 LINE L2 -9 3304 3247 250 327 38 69 chr10 9993022 9993181 -130323584 - L2 LINE L2 -3 3269 3116 213 401 30 0 chr10 9993477 9993609 -130323156 - L2 LINE L2 -676 2638 2503 1189 192 62 32 chr10 9993882 9994238 -130322527 + MSTC LTR MaLR 26 428 0 26 0 0 0 chr10 9994611 9994637 -130322128 + AT_rich Low_complexity Low_complexity 1 26 0 1922 142 0 23 chr10 9995423 9995726 -130321039 + AluSx SINE Alu 1 296 -16 254 85 0 21 chr10 9995729 9995776 -130320989 + (TAAA)n Simple_repeat Simple_repeat 4 49 0 2212 111 0 0 chr10 9996720 9997017 -130319748 + AluSc SINE Alu 2 298 -11 199 162 54 0 chr10 9997088 9997125 -130319640 + MIR SINE MIR 115 153 -109 1272 169 56 26 chr10 9997680 9997947 -130318818 + AluJo SINE Alu 21 295 -17 246 62 0 0 chr10 9997947 9997979 -130318786 + (GA)n Simple_repeat Simple_repeat 1 32 0 232 295 103 0 chr10 9998438 9998516 -130318249 - MIR SINE MIR -70 138 53 591 323 42 5 chr10 9998738 9998955 -130317810 - MIR SINE MIR -4 258 34 1112 297 7 51 chr10 10000385 10000799 -130315966 - L1MCa LINE L1 -6126 414 19 316 346 70 25 chr10 10000878 10001121 -130315644 + L1ME LINE L1 5493 5746 -375 21 0 0 0 chr10 10001142 10001163 -130315602 + AT_rich Low_complexity Low_complexity 1 21 0 37 69 0 0 chr10 10001241 10001313 -130315452 + AT_rich Low_complexity Low_complexity 1 72 0 305 345 9 0 chr10 10001444 10001554 -130315211 - HAL1 LINE L1 -812 1695 1585 296 143 18 0 chr10 10001691 10001747 -130315018 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 2511 128 5 0 chr10 10003262 10003644 -130313121 - L1PA15 LINE L1 -1 6164 5781 1399 198 43 3 chr10 10003650 10003978 -130312787 + L1MC1 LINE L1 5993 6333 0 23 0 0 0 chr10 10004099 10004122 -130312643 + AT_rich Low_complexity Low_complexity 1 23 0 186 43 0 0 chr10 10004732 10004755 -130312010 + (GA)n Simple_repeat Simple_repeat 2 24 0 309 358 49 7 chr10 10005253 10005538 -130311227 + L1M4 LINE L1 4757 5053 -1093 706 229 41 64 chr10 10005593 10005860 -130310905 - L1MEc LINE L1 -2099 4116 3856 8086 34 38 0 chr10 10005909 10006929 -130309836 + L1P LINE L1 2799 3857 -2289 2118 251 71 28 chr10 10006984 10007872 -130308893 - L1MEc LINE L1 -3919 2477 1552 206 326 11 21 chr10 10008598 10008693 -130308072 + GA-rich Low_complexity Low_complexity 1 94 0 1833 141 50 0 chr10 10009195 10009492 -130307273 + AluSx SINE Alu 1 312 0 34 0 0 0 chr10 10010677 10010711 -130306054 + AT_rich Low_complexity Low_complexity 1 34 0 1870 279 89 45 chr10 10010718 10011892 -130304873 - L1MEc LINE L1 -4839 1557 333 1523 205 70 63 chr10 10011906 10012394 -130304371 - MLT1D LTR MaLR -2 503 13 848 306 46 7 chr10 10012411 10012692 -130304073 - L1MEc LINE L1 -6077 319 28 263 239 62 31 chr10 10013708 10013886 -130302879 - L1M4 LINE L1 -395 5779 5594 383 279 88 42 chr10 10013899 10014148 -130302617 - L1M4 LINE L1 -683 5479 5219 493 295 78 34 chr10 10014201 10014614 -130302151 - L1ME2 LINE L1 -309 5855 5425 1213 286 39 30 chr10 10014632 10015322 -130301443 - L1ME2 LINE L1 -769 5377 4682 244 293 44 49 chr10 10016061 10016266 -130300499 + L1ME LINE L1 5526 5729 -392 27 73 0 0 chr10 10016446 10016501 -130300264 + AT_rich Low_complexity Low_complexity 1 55 0 1435 80 0 5 chr10 10016502 10016702 -130300063 - L1PA13 LINE L1 -7 6156 5958 3396 99 4 29 chr10 10016702 10017217 -130299548 + L1PA13 LINE L1 5440 5941 -222 547 277 7 0 chr10 10017277 10017418 -130299347 - L1ME LINE L1 -445 5719 5578 180 111 0 0 chr10 10017711 10017738 -130299027 + (TG)n Simple_repeat Simple_repeat 2 28 0 313 114 45 11 chr10 10018505 10018593 -130298172 + (TA)n Simple_repeat Simple_repeat 1 91 0 3875 245 52 11 chr10 10018668 10020142 -130296623 + L1M4 LINE L1 1 1540 -4495 390 312 87 74 chr10 10021744 10022285 -130294480 - L2 LINE L2 -836 2478 1931 281 352 31 8 chr10 10023383 10023511 -130293254 + L2 LINE L2 2826 2956 -358 23 0 0 0 chr10 10023530 10023553 -130293212 + AT_rich Low_complexity Low_complexity 1 23 0 2190 114 10 0 chr10 10024010 10024316 -130292449 + AluSx SINE Alu 4 312 0 2266 93 0 0 chr10 10024379 10024698 -130292067 + AluY SINE Alu 1 311 0 504 291 147 16 chr10 10025523 10025904 -130290861 - L1ME3A LINE L1 -208 5962 5539 242 248 74 27 chr10 10025886 10026035 -130290730 + L1M4 LINE L1 4266 4421 -1613 * 389 302 84 36 chr10 10026239 10026603 -130290162 - L1ME3A LINE L1 -755 5391 5000 554 278 114 31 chr10 10026722 10026934 -130289831 - L1ME3A LINE L1 -1302 4844 4651 2867 0 0 0 chr10 10026934 10027245 -130289520 - AluYa5 SINE Alu 0 311 1 554 278 114 31 chr10 10027245 10027478 -130289287 - L1ME3A LINE L1 -1495 4651 4362 203 170 21 0 chr10 10027580 10027627 -130289138 + CT-rich Low_complexity Low_complexity 1 48 0 290 299 106 18 chr10 10027627 10027901 -130288864 - L1ME3A LINE L1 -2576 3570 3273 368 285 101 67 chr10 10027923 10028190 -130288575 - HAL1 LINE L1 -876 1631 1356 754 293 96 77 chr10 10028627 10029173 -130287592 - L2 LINE L2 -2 3311 2748 1539 223 61 158 chr10 10029213 10030686 -130286079 + L1ME2 LINE L1 2919 4248 -1898 992 227 65 57 chr10 10030833 10030865 -130285900 + L1ME2 LINE L1 5728 5758 -406 1301 230 137 40 chr10 10030865 10031338 -130285427 + LTR40a LTR ERVL 1 519 0 992 227 65 57 chr10 10031338 10031716 -130285049 + L1ME2 LINE L1 5758 6144 -20 181 256 98 73 chr10 10033351 10033433 -130283332 + MER5B DNA MER1_type 57 140 -38 22 35 0 0 chr10 10033864 10033893 -130282872 + AT_rich Low_complexity Low_complexity 1 29 0 188 349 16 0 chr10 10034329 10034392 -130282373 + L2 LINE L2 2557 2620 -694 24 32 0 0 chr10 10035203 10035234 -130281531 + AT_rich Low_complexity Low_complexity 1 31 0 309 293 104 80 chr10 10035265 10035603 -130281162 + HERVL LTR ERVL 1204 1549 -4105 1726 200 113 39 chr10 10035825 10036286 -130280479 - MLT1D LTR MaLR -2 503 9 815 311 20 23 chr10 10036288 10036593 -130280172 + HERVL LTR ERVL 3393 3696 -2068 664 269 83 16 chr10 10036623 10036876 -130279889 + HERVL LTR ERVL 3750 4019 -1635 * 1464 328 54 33 chr10 10036862 10037828 -130278937 + HERVL LTR ERVL 4385 5370 -394 233 286 62 54 chr10 10038168 10038280 -130278485 + LTR50 LTR ERVL 25 137 -658 830 248 133 5 chr10 10038344 10038562 -130278203 - MLT1E LTR MaLR 0 593 348 472 240 17 117 chr10 10038585 10038708 -130278057 - MLT1E LTR MaLR -362 231 130 2310 100 3 0 chr10 10038708 10039019 -130277746 - AluSx SINE Alu 0 312 1 472 240 17 117 chr10 10039019 10039074 -130277691 - MLT1E LTR MaLR -463 130 71 2115 106 17 0 chr10 10039775 10040067 -130276698 + AluSx SINE Alu 1 297 -15 230 314 91 16 chr10 10040801 10040922 -130275843 - MLT2E LTR ERVL -425 203 74 221 276 0 0 chr10 10043242 10043300 -130273465 + (TA)n Simple_repeat Simple_repeat 1 58 0 1291 278 122 33 chr10 10043381 10043924 -130272841 + MLT1G1 LTR MaLR 3 593 -2 537 305 106 25 chr10 10043967 10044373 -130272392 - L1ME LINE L1 -349 6624 6186 21 36 0 0 chr10 10044791 10044819 -130271946 + AT_rich Low_complexity Low_complexity 1 28 0 3254 223 22 39 chr10 10044835 10045797 -130270968 - L1ME LINE L1 -1656 5301 4356 796 165 80 58 chr10 10045798 10045986 -130270779 + L1PB4 LINE L1 5952 6143 -13 1820 174 3 0 chr10 10045994 10046298 -130270467 - AluSx SINE Alu -5 307 3 406 259 153 22 chr10 10046313 10046634 -130270131 - L1ME LINE L1 -2579 4378 4016 466 308 118 39 chr10 10046692 10047098 -130269667 - L1ME LINE L1 -4136 3002 2565 228 163 0 0 chr10 10047402 10047445 -130269320 + (TG)n Simple_repeat Simple_repeat 2 44 0 34 42 0 0 chr10 10047445 10047493 -130269272 + AT_rich Low_complexity Low_complexity 1 48 0 685 259 110 69 chr10 10047505 10047895 -130268870 - L1ME LINE L1 -4608 2351 1946 66 35 0 0 chr10 10047900 10047987 -130268778 + AT_rich Low_complexity Low_complexity 1 87 0 331 231 30 45 chr10 10047994 10048128 -130268637 - L1ME LINE L1 -4946 1909 1778 617 146 22 26 chr10 10048143 10048366 -130268399 - L1ME LINE L1 -5252 1607 1346 * 942 246 106 38 chr10 10048363 10048627 -130268138 - L1ME LINE L1 -6222 637 356 222 143 0 0 chr10 10048797 10048846 -130267919 + (TG)n Simple_repeat Simple_repeat 2 50 0 229 282 203 42 chr10 10049014 10049255 -130267510 - L1MEd LINE L1 -5836 283 4 2492 100 5 24 chr10 10049544 10049915 -130266850 - THE1B LTR MaLR 0 364 1 10680 121 6 13 chr10 10049915 10051506 -130265259 - THE1B-int LTR MaLR 0 1580 1 2338 99 25 25 chr10 10051506 10051869 -130264896 - THE1B LTR MaLR 0 364 2 287 263 61 53 chr10 10053249 10053363 -130263402 + L2 LINE L2 2969 3083 -189 2465 63 0 0 chr10 10054851 10055150 -130261615 - AluY SINE Alu -12 299 1 30 27 0 0 chr10 10055152 10055189 -130261576 + AT_rich Low_complexity Low_complexity 1 37 0 193 161 0 36 chr10 10057179 10057235 -130259530 + GA-rich Low_complexity Low_complexity 3 56 0 241 234 117 32 chr10 10057741 10057835 -130258930 + HAL1b LINE L1 381 482 -866 23 0 0 0 chr10 10057838 10057861 -130258904 + AT_rich Low_complexity Low_complexity 1 23 0 250 350 34 0 chr10 10059039 10059156 -130257609 - L2 LINE L2 0 3313 3193 2135 278 178 43 chr10 10059211 10060429 -130256336 + L2 LINE L2 795 2177 -1137 1988 136 3 17 chr10 10061757 10062077 -130254688 - AluSx SINE Alu 0 312 1 21 36 0 0 chr10 10062135 10062163 -130254602 + AT_rich Low_complexity Low_complexity 1 28 0 1943 135 28 0 chr10 10062168 10062456 -130254309 + AluSx SINE Alu 1 296 -16 22 35 0 0 chr10 10062551 10062580 -130254185 + AT_rich Low_complexity Low_complexity 1 29 0 245 228 54 0 chr10 10062772 10062864 -130253901 + (TA)n Simple_repeat Simple_repeat 1 97 0 1088 228 26 111 chr10 10063319 10063771 -130252994 - MLT2D LTR ERVL 0 414 1 357 319 43 7 chr10 10063771 10063909 -130252856 + MIR3 SINE MIR 48 190 -18 281 299 10 0 chr10 10064546 10064643 -130252122 - Charlie7 DNA MER1_type 0 2612 2515 1752 255 63 17 chr10 10065027 10065564 -130251201 + L1MCa LINE L1 28 589 -5837 1771 156 43 18 chr10 10065566 10065894 -130250871 - MER44D DNA MER2_type -3 606 1 6874 225 80 27 chr10 10065898 10070069 -130246696 + L1MC2 LINE L1 513 4903 -1661 4476 194 27 17 chr10 10070073 10071050 -130245715 + L1MC2 LINE L1 5775 6760 -2 252 0 0 0 chr10 10071166 10071194 -130245571 + (CA)n Simple_repeat Simple_repeat 2 29 0 274 269 0 0 chr10 10071238 10071290 -130245475 + Tigger3(Golem) DNA MER2_type 2 53 -2976 * 1886 171 47 0 chr10 10071286 10071626 -130245139 + Tigger3(Golem) DNA MER2_type 2673 3028 -1 270 0 0 0 chr10 10071631 10071661 -130245104 + (TG)n Simple_repeat Simple_repeat 1 30 0 288 70 0 0 chr10 10071678 10071721 -130245044 + (TTTAA)n Simple_repeat Simple_repeat 3 45 0 1913 87 12 0 chr10 10071721 10071975 -130244790 - AluSp SINE Alu -27 286 30 1145 200 68 13 chr10 10071975 10072210 -130244555 - AluJb SINE Alu -64 248 1 213 301 126 10 chr10 10072210 10072313 -130244452 - MIR SINE MIR -79 183 69 801 213 100 12 chr10 10072811 10073060 -130243705 - L1M4 LINE L1 -2494 3652 3382 743 296 155 33 chr10 10073092 10073737 -130243028 - L1MCc LINE L1 -4888 1535 812 816 320 74 27 chr10 10073965 10074412 -130242353 - L1MCc LINE L1 -5937 486 19 459 0 0 0 chr10 10075395 10075446 -130241319 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 332 217 27 0 chr10 10076825 10077092 -130239673 + (TA)n Simple_repeat Simple_repeat 1 274 0 391 209 26 0 chr10 10077114 10077389 -130239376 + (TA)n Simple_repeat Simple_repeat 1 282 0 312 60 116 0 chr10 10077400 10077457 -130239308 + MLT2A2 LTR ERVL 400 453 0 2356 117 5 24 chr10 10078262 10078631 -130238134 - THE1B LTR MaLR 0 364 3 1738 184 0 0 chr10 10078775 10079074 -130237691 + AluSx SINE Alu 1 299 -13 1618 187 13 0 chr10 10079989 10080294 -130236471 - AluSg SINE Alu -1 309 1 220 307 40 27 chr10 10081249 10081324 -130235441 - MIR SINE MIR -34 228 153 232 217 36 12 chr10 10081404 10081487 -130235278 + L1MC4 LINE L1 6617 6701 -1341 536 278 106 8 chr10 10082490 10082745 -130234020 + L1M4 LINE L1 1803 2082 -5381 310 214 0 24 chr10 10082765 10082849 -130233916 + L1M4 LINE L1 2482 2563 -5004 463 289 17 30 chr10 10083157 10083392 -130233373 + L1ME2 LINE L1 2014 2245 -5310 31 26 0 0 chr10 10083392 10083430 -130233335 + AT_rich Low_complexity Low_complexity 1 38 0 496 296 73 46 chr10 10083430 10084272 -130232493 + L1ME2 LINE L1 2524 3419 -4146 302 273 52 47 chr10 10084304 10084536 -130232229 + L1ME2 LINE L1 3518 3710 -3855 944 262 124 2 chr10 10084641 10085099 -130231666 + L1ME2 LINE L1 3692 4205 -3360 316 250 34 0 chr10 10085103 10085191 -130231574 + L1ME2 LINE L1 4279 4369 -3196 2191 236 100 28 chr10 10085367 10086291 -130230474 + L1ME2 LINE L1 6572 7564 -19 31 44 0 0 chr10 10086542 10086587 -130230178 + AT_rich Low_complexity Low_complexity 1 45 0 360 64 0 0 chr10 10086992 10087039 -130229726 + (TG)n Simple_repeat Simple_repeat 2 48 0 214 376 20 10 chr10 10087059 10087160 -130229605 + MIR SINE MIR 151 252 -10 503 326 45 48 chr10 10088049 10088618 -130228147 - ERVL LTR ERVL -786 4353 3694 1571 343 40 50 chr10 10088700 10089814 -130226951 - ERVL LTR ERVL -1869 3895 2793 333 251 88 26 chr10 10089985 10090154 -130226611 + MER41B LTR ERV1 112 425 -210 929 309 81 72 chr10 10090368 10090807 -130225958 - ERVL LTR ERVL -2249 2747 2298 1823 175 7 7 chr10 10090807 10091116 -130225649 - AluSx SINE Alu -3 309 1 929 309 81 72 chr10 10091116 10091347 -130225418 - ERVL LTR ERVL -2698 2298 2071 1204 263 67 40 chr10 10091373 10091818 -130224947 - ERVL LTR ERVL -3615 1381 925 1338 176 113 60 chr10 10091981 10092351 -130224414 - MLT1B LTR MaLR 0 390 1 2065 128 7 0 chr10 10092866 10093162 -130223603 - AluSg SINE Alu -12 298 1 2192 193 29 2 chr10 10093389 10093798 -130222967 - MSTB LTR MaLR -2 424 5 394 333 45 35 chr10 10093892 10094180 -130222585 - LTR16B LTR ERVL -171 293 3 862 95 0 16 chr10 10094700 10094865 -130221900 - AluSg/x SINE Alu 0 351 189 219 276 143 78 chr10 10095739 10095956 -130220809 - MIR SINE MIR -12 250 20 25 65 0 0 chr10 10096734 10096780 -130219985 + AT_rich Low_complexity Low_complexity 1 46 0 283 345 0 9 chr10 10097212 10097322 -130219443 - MIR SINE MIR -123 139 31 288 53 0 0 chr10 10099495 10099533 -130217232 + (TG)n Simple_repeat Simple_repeat 1 38 0 1788 98 15 15 chr10 10100482 10100746 -130216019 + AluSg SINE Alu 39 302 -8 22 56 0 0 chr10 10100826 10100862 -130215903 + AT_rich Low_complexity Low_complexity 1 36 0 225 0 0 0 chr10 10101113 10101138 -130215627 + (TG)n Simple_repeat Simple_repeat 1 25 0 2422 57 0 17 chr10 10101278 10101578 -130215187 - AluY SINE Alu -16 295 1 190 282 64 51 chr10 10101599 10101677 -130215088 + L2 LINE L2 1876 1954 -1360 201 352 119 19 chr10 10101758 10101917 -130214848 + MIR SINE MIR 26 200 -62 460 277 95 84 chr10 10101945 10102324 -130214441 - MLT1I LTR MaLR -13 396 14 243 0 0 0 chr10 10102966 10102993 -130213772 + (CA)n Simple_repeat Simple_repeat 2 28 0 219 114 0 0 chr10 10103047 10103082 -130213683 + (TA)n Simple_repeat Simple_repeat 1 35 0 1311 264 113 10 chr10 10103099 10103190 -130213575 + L1ME LINE L1 22 102 -6294 2267 102 0 0 chr10 10103190 10103484 -130213281 + AluSc SINE Alu 1 294 -15 1311 264 113 10 chr10 10103484 10103915 -130212850 + L1ME LINE L1 102 598 -5798 874 241 166 10 chr10 10103937 10104419 -130212346 + L1ME LINE L1 714 1270 -5126 413 284 53 42 chr10 10104489 10104794 -130211971 + L1M1 LINE L1 2664 3064 -4577 * 2257 248 106 32 chr10 10104793 10105588 -130211177 + L1M3a LINE L1 971 1706 -4676 1543 176 7 33 chr10 10105588 10105889 -130210876 - AluJo SINE Alu -8 304 12 2257 248 106 32 chr10 10105889 10106963 -130209802 + L1M3a LINE L1 1706 3061 -3321 541 267 37 42 chr10 10106961 10107178 -130209587 + L1ME LINE L1 1853 2068 -4328 * 883 174 6 23 chr10 10107341 10107513 -130209252 - AluSc SINE Alu -140 169 1 321 280 90 76 chr10 10107614 10107825 -130208940 + L1MC4a LINE L1 5689 5902 -1906 196 323 54 11 chr10 10108040 10108133 -130208632 - L2 LINE L2 -1456 1858 1762 2191 88 7 27 chr10 10108490 10108786 -130207979 - AluSg SINE Alu -20 290 1 407 198 23 23 chr10 10110209 10110386 -130206379 + (CATATA)n Simple_repeat Simple_repeat 4 180 0 280 254 8 8 chr10 10110398 10110528 -130206237 + (CATATA)n Simple_repeat Simple_repeat 6 135 0 21 36 0 0 chr10 10111489 10111517 -130205248 + AT_rich Low_complexity Low_complexity 1 28 0 2028 168 65 23 chr10 10111618 10111736 -130205029 - Tigger2 DNA MER2_type 0 2718 2606 2276 100 0 7 chr10 10111736 10112037 -130204728 - AluSx SINE Alu -13 299 1 2028 168 65 23 chr10 10112037 10112352 -130204413 - Tigger2 DNA MER2_type -112 2606 2267 493 118 0 0 chr10 10112336 10112404 -130204361 - Tigger2 DNA MER2_type -2649 69 2 * 2159 125 0 3 chr10 10112512 10112825 -130203940 - AluSx SINE Alu 0 312 1 252 384 58 15 chr10 10112827 10113096 -130203669 - L2 LINE L2 -240 3032 2751 4122 226 46 12 chr10 10113280 10114443 -130202322 - L1 LINE L1 -2626 3520 2318 217 182 15 15 chr10 10114548 10114614 -130202151 + (TA)n Simple_repeat Simple_repeat 2 67 0 2301 261 99 49 chr10 10114646 10114864 -130201901 + L1ME LINE L1 3520 3726 -2489 1789 155 28 3 chr10 10114864 10115154 -130201611 + AluSx SINE Alu 5 301 -11 2301 261 99 49 chr10 10115154 10115219 -130201546 + L1ME LINE L1 3726 3786 -2429 327 25 0 0 chr10 10115219 10115259 -130201506 + (CA)n Simple_repeat Simple_repeat 2 41 0 2301 261 99 49 chr10 10115259 10116339 -130200426 + L1ME LINE L1 3786 4952 -1263 429 274 57 0 chr10 10116338 10116462 -130200303 + L1ME LINE L1 5698 5828 -405 * 452 294 119 59 chr10 10116490 10116878 -130199887 + LTR16A LTR ERVL 16 426 -24 239 315 11 56 chr10 10117090 10117179 -130199586 + L2 LINE L2 3187 3271 -1 810 280 42 17 chr10 10117876 10118112 -130198653 - MIR SINE MIR -10 252 11 1588 259 92 47 chr10 10118428 10120545 -130196220 - L1MD3 LINE L1 -14 7981 5693 205 269 19 0 chr10 10121669 10121721 -130195044 + MIR SINE MIR 160 212 -50 816 226 111 17 chr10 10122352 10122586 -130194179 - MLT2B2 LTR ERVL 0 515 260 688 173 0 8 chr10 10122596 10122729 -130194036 - L1PA15-16 LINE L1 -3895 2954 2823 630 112 9 9 chr10 10122731 10122838 -130193927 + L1PA15 LINE L1 6056 6162 -3 588 271 39 55 chr10 10122838 10123093 -130193672 - MLT2B2 LTR ERVL -264 251 1 2036 161 55 3 chr10 10123168 10123548 -130193217 - MER57A LTR ERV1 0 403 4 284 361 103 30 chr10 10123630 10124104 -130192661 + L2 LINE L2 2804 3312 -1 1544 231 115 0 chr10 10125049 10125448 -130191317 - MLT2B1 LTR ERVL -75 445 1 542 313 19 30 chr10 10126043 10126311 -130190454 + LTR16A LTR ERVL 88 352 -98 237 316 26 26 chr10 10126518 10126635 -130190130 - MIR3 SINE MIR -53 155 39 299 320 10 19 chr10 10126749 10126852 -130189913 + MER5A DNA MER1_type 64 165 -24 1305 188 65 60 chr10 10126901 10127284 -130189481 - MLT1B LTR MaLR -1 389 5 25 0 0 0 chr10 10127685 10127710 -130189055 + AT_rich Low_complexity Low_complexity 1 25 0 1988 147 10 0 chr10 10130278 10130571 -130186194 - AluSx SINE Alu -15 297 2 284 388 71 41 chr10 10131082 10131520 -130185245 - L2 LINE L2 -15 3257 2807 361 231 29 10 chr10 10132074 10132178 -130184587 + L1M4 LINE L1 5698 5803 -375 750 222 23 56 chr10 10132519 10132822 -130183943 - L1MEc LINE L1 -3871 3694 3398 733 274 4 34 chr10 10132829 10133063 -130183702 - L1MEc LINE L1 -6153 1593 1367 261 0 0 0 chr10 10135856 10135885 -130180880 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 225 171 0 0 chr10 10136699 10136734 -130180031 - U2 snRNA snRNA -152 36 2 910 263 55 24 chr10 10138022 10138311 -130178454 - LTR16C LTR ERVL -8 483 186 263 250 0 0 chr10 10138523 10138579 -130178186 - MER2 DNA MER2_type 0 345 290 948 226 25 0 chr10 10138644 10138843 -130177922 - MER2 DNA MER2_type -140 205 2 261 337 94 54 chr10 10139451 10139932 -130176833 - ERVL LTR ERVL -1149 4615 4116 402 319 104 34 chr10 10140043 10140397 -130176368 - ERVL LTR ERVL -2125 3529 3151 472 329 67 69 chr10 10140485 10140947 -130175818 - ERVL LTR ERVL -1994 3002 2542 794 304 40 33 chr10 10141054 10141482 -130175283 - L1MC/D LINE L1 -2115 5693 5263 25 31 0 0 chr10 10141542 10141574 -130175191 + AT_rich Low_complexity Low_complexity 1 32 0 26 30 0 0 chr10 10141777 10141810 -130174955 + AT_rich Low_complexity Low_complexity 1 33 0 1548 189 25 0 chr10 10141899 10142174 -130174591 - AluJo SINE Alu -30 282 1 799 171 21 47 chr10 10142305 10142498 -130174267 - L1MB1 LINE L1 -226 5963 5776 1338 173 26 61 chr10 10142548 10142861 -130173904 + L1M3 LINE L1 5489 5790 -544 483 322 24 10 chr10 10142893 10143101 -130173664 + MER58C DNA MER1_type 5 215 0 775 291 25 30 chr10 10143618 10144093 -130172672 - MLT2F LTR ERVL -158 505 5 1371 311 23 33 chr10 10144418 10144599 -130172166 - ERVL LTR ERVL -348 5416 5235 2324 102 0 0 chr10 10144599 10144893 -130171872 + AluSg SINE Alu 1 294 -16 1371 311 23 33 chr10 10144893 10145610 -130171155 - ERVL LTR ERVL -529 5235 4456 203 0 0 36 chr10 10146248 10146276 -130170489 + (CA)n Simple_repeat Simple_repeat 2 28 0 186 133 0 0 chr10 10146380 10146410 -130170355 + (CATA)n Simple_repeat Simple_repeat 4 33 0 285 146 0 0 chr10 10146423 10146471 -130170294 + (TG)n Simple_repeat Simple_repeat 1 48 0 5510 134 7 18 chr10 10147120 10148723 -130168042 - L1PA15 LINE L1 -2 6163 4557 4557 224 13 5 chr10 10148735 10149786 -130166979 - L1PA15 LINE L1 -1944 4202 3143 3411 168 57 5 chr10 10149804 10150381 -130166384 + L1PA13 LINE L1 1 607 -6180 1718 175 55 37 chr10 10150381 10150706 -130166059 - MER1B DNA MER1_type -7 332 2 5990 225 62 2 chr10 10150707 10151931 -130164834 + L1PA13 LINE L1 608 1904 -4883 22 56 0 0 chr10 10153111 10153147 -130163618 + AT_rich Low_complexity Low_complexity 1 36 0 612 258 162 34 chr10 10153181 10153537 -130163228 + MLT1I LTR MaLR 1 450 0 2253 83 6 43 chr10 10153623 10153948 -130162817 - AluSp SINE Alu 0 313 1 25 51 0 0 chr10 10153974 10154013 -130162752 + AT_rich Low_complexity Low_complexity 1 39 0 209 295 163 12 chr10 10154072 10154238 -130162527 - MIR SINE MIR -1 261 71 209 346 145 11 chr10 10154298 10154477 -130162288 - MIR SINE MIR -13 249 47 27 29 0 0 chr10 10154990 10155024 -130161741 + AT_rich Low_complexity Low_complexity 1 34 0 3034 147 25 55 chr10 10155695 10156326 -130160439 - LTR9 LTR ERV1 0 612 1 3446 150 12 5 chr10 10156470 10157031 -130159734 + MER61E LTR ERV1 1 565 -4 802 295 62 37 chr10 10157280 10157714 -130159051 + L1MCc LINE L1 24 468 -5955 1417 279 89 33 chr10 10158020 10158181 -130158584 + L1MCc LINE L1 1945 2095 -5027 234 0 0 0 chr10 10158181 10158207 -130158558 + (CA)n Simple_repeat Simple_repeat 2 27 0 1417 279 89 33 chr10 10158207 10158638 -130158127 + L1MCc LINE L1 2095 2596 -4526 2130 119 3 3 chr10 10158638 10158931 -130157834 + AluSx SINE Alu 1 293 -19 1417 279 89 33 chr10 10158931 10159135 -130157630 + L1MCc LINE L1 2596 2787 -4335 340 261 18 73 chr10 10159132 10159297 -130157468 + L1ME1 LINE L1 6006 6161 -5 * 26 50 0 0 chr10 10159644 10159684 -130157081 + AT_rich Low_complexity Low_complexity 1 40 0 330 279 0 0 chr10 10160270 10160349 -130156416 + L2 LINE L2 3181 3259 -13 506 328 49 11 chr10 10160689 10160872 -130155893 + MIR SINE MIR 29 218 -44 2225 98 3 25 chr10 10161370 10161688 -130155077 - AluSp SINE Alu -2 311 1 345 262 128 43 chr10 10162126 10162290 -130154475 + MER3 DNA MER1_type 6 183 -26 7783 21 0 0 chr10 10162413 10163500 -130153265 + L1PA3 LINE L1 5066 6152 -3 240 331 37 37 chr10 10163590 10163753 -130153012 - L2 LINE L2 -2 3311 3149 2175 125 0 3 chr10 10164130 10164435 -130152330 + AluSx SINE Alu 1 304 -8 462 268 40 11 chr10 10164535 10164775 -130151990 - L1MB7 LINE L1 -11 6169 5915 25 31 0 0 chr10 10166070 10166102 -130150663 + AT_rich Low_complexity Low_complexity 1 32 0 1595 199 13 3 chr10 10166250 10166551 -130150214 + AluJo SINE Alu 1 304 -8 25 31 0 0 chr10 10166600 10166632 -130150133 + AT_rich Low_complexity Low_complexity 1 32 0 1899 182 9 0 chr10 10166788 10167129 -130149636 - MER7A DNA MER2_type -1 345 4 519 326 94 38 chr10 10167187 10167580 -130149185 + L2 LINE L2 1752 2166 -1148 1638 199 38 20 chr10 10167663 10168005 -130148760 + MLT1C LTR MaLR 90 437 -30 9352 155 22 8 chr10 10168005 10169599 -130147166 + Tigger1 DNA MER2_type 3 1619 -799 5539 79 11 35 chr10 10169599 10170039 -130146726 + L1PB1 LINE L1 5362 5776 -375 198 103 0 0 chr10 10170039 10170068 -130146697 + (CATA)n Simple_repeat Simple_repeat 2 30 0 5539 79 11 35 chr10 10170068 10170436 -130146329 + L1PB1 LINE L1 5776 6151 0 22 56 0 0 chr10 10170446 10170482 -130146283 + AT_rich Low_complexity Low_complexity 1 36 0 895 168 6 0 chr10 10170482 10170649 -130146116 + Tigger1 DNA MER2_type 1621 1788 -630 6075 24 0 2 chr10 10170649 10171570 -130145195 - L1PA4 LINE L1 -181 5974 5055 1367 30 18 0 chr10 10171570 10171731 -130145034 + L1PA4 LINE L1 5982 6152 -3 210 71 0 0 chr10 10171761 10171789 -130144976 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 2731 79 3 0 chr10 10171789 10172157 -130144608 + L1PB1 LINE L1 5783 6151 0 3412 159 42 10 chr10 10172187 10172808 -130143957 + Tigger1 DNA MER2_type 1778 2418 0 586 315 117 48 chr10 10172855 10173390 -130143375 + L2 LINE L2 2227 2723 -590 619 200 124 81 chr10 10173390 10173600 -130143165 + MER20 DNA MER1_type 1 219 0 586 315 117 48 chr10 10173600 10173918 -130142847 + L2 LINE L2 2723 3155 -158 2250 124 37 93 chr10 10173918 10174153 -130142612 + Tigger2a DNA MER2_type 1 199 -2509 2207 125 0 0 chr10 10174153 10174465 -130142300 - AluSx SINE Alu 0 312 1 2250 124 37 93 chr10 10174465 10174689 -130142076 + Tigger2a DNA MER2_type 199 434 0 586 315 117 48 chr10 10174689 10174802 -130141963 + L2 LINE L2 3155 3259 -54 405 0 0 0 chr10 10174803 10174848 -130141917 + (CA)n Simple_repeat Simple_repeat 2 46 0 180 97 0 0 chr10 10174866 10174897 -130141868 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 2888 126 23 71 chr10 10175134 10175728 -130141037 + LTR10A LTR ERV1 1 612 -21 1057 342 105 14 chr10 10175733 10176426 -130140339 + L2 LINE L2 158 913 -2401 773 314 131 16 chr10 10176428 10176704 -130140061 + L2 LINE L2 2439 2770 -544 1474 209 59 14 chr10 10176704 10177062 -130139703 - MLT1A2 LTR MaLR 0 374 1 773 314 131 16 chr10 10177062 10177158 -130139607 + L2 LINE L2 2770 2854 -460 1288 214 49 94 chr10 10177198 10177883 -130138882 - LTR9 LTR ERV1 0 779 1 871 299 41 60 chr10 10177897 10178312 -130138453 + L2 LINE L2 2905 3311 -2 302 279 101 6 chr10 10179539 10179697 -130137068 - L1ME3A LINE L1 -208 5962 5790 385 301 13 13 chr10 10179720 10179853 -130136912 - MLT1H LTR MaLR -374 175 1 836 266 97 48 chr10 10180027 10180358 -130136407 - MLT1I LTR MaLR 0 409 63 394 320 132 50 chr10 10181435 10181838 -130134927 - MLT1H LTR MaLR -43 506 71 302 200 14 14 chr10 10182025 10182095 -130134670 + Tigger5 DNA MER2_type 2251 2320 -3 246 288 18 9 chr10 10182150 10182261 -130134504 - L1MEc LINE L1 -3820 2395 2284 460 304 53 23 chr10 10182384 10182647 -130134118 - L1MEc LINE L1 -4177 2219 1949 264 250 38 12 chr10 10182987 10183067 -130133698 - L1PA15-16 LINE L1 -4348 2501 2420 241 226 0 0 chr10 10183124 10183177 -130133588 + CT-rich Low_complexity Low_complexity 3 55 0 488 296 53 76 chr10 10183229 10183533 -130133232 - L1MEc LINE L1 -4910 1295 999 182 250 225 12 chr10 10184579 10184659 -130132106 + L2 LINE L2 3214 3310 -3 222 286 24 12 chr10 10184712 10184796 -130131969 - L3b LINE CR1 -92 1491 1407 390 252 52 37 chr10 10185448 10185583 -130131182 + L2 LINE L2 3159 3295 -18 21 0 0 0 chr10 10185679 10185700 -130131065 + AT_rich Low_complexity Low_complexity 1 21 0 5123 92 29 20 chr10 10185998 10186785 -130129980 - SVA Other Other 0 1386 593 861 283 39 25 chr10 10186990 10187300 -130129465 + Zaphod DNA AcHobo 1 362 -3669 2132 100 37 7 chr10 10187300 10187600 -130129165 + AluSx SINE Alu 2 310 -2 861 283 39 25 chr10 10187600 10187617 -130129148 + Zaphod DNA AcHobo 362 377 -3654 712 278 33 41 chr10 10187854 10188099 -130128666 + Zaphod DNA AcHobo 362 604 -3427 1282 226 79 40 chr10 10188222 10188498 -130128267 + Zaphod DNA AcHobo 3341 3605 -426 180 0 0 0 chr10 10188498 10188518 -130128247 + (TA)n Simple_repeat Simple_repeat 2 21 0 1780 137 34 17 chr10 10188518 10188810 -130127955 - AluSx SINE Alu -15 297 1 1282 226 79 40 chr10 10188810 10189139 -130127626 + Zaphod DNA AcHobo 3604 3971 -60 830 205 51 44 chr10 10189222 10189241 -130127524 - MLT2B1 LTR ERVL -40 480 463 261 0 0 0 chr10 10189241 10189270 -130127495 + (TG)n Simple_repeat Simple_repeat 2 30 0 830 205 51 44 chr10 10189270 10189477 -130127288 - MLT2B1 LTR ERVL -57 463 196 224 336 18 27 chr10 10189674 10189784 -130126981 - MER5B DNA MER1_type -20 158 50 248 299 15 0 chr10 10190642 10190709 -130126056 - L3 LINE CR1 -2 1575 1508 307 326 181 5 chr10 10191153 10191368 -130125397 - L3 LINE CR1 -81 1496 1244 225 65 0 0 chr10 10191391 10191422 -130125343 + (TG)n Simple_repeat Simple_repeat 2 32 0 602 190 6 134 chr10 10191851 10192030 -130124735 - L2 LINE L2 0 3313 3158 496 255 108 0 chr10 10192044 10192201 -130124564 - MER104 DNA MER2_type -4 176 3 217 335 76 40 chr10 10192423 10192647 -130124118 + L2 LINE L2 2498 2729 -585 302 300 55 36 chr10 10193091 10193201 -130123564 + MIR SINE MIR 32 143 -119 28 29 0 0 chr10 10193468 10193503 -130123262 + AT_rich Low_complexity Low_complexity 1 35 0 31 44 0 0 chr10 10193655 10193700 -130123065 + AT_rich Low_complexity Low_complexity 1 45 0 21 57 0 0 chr10 10193707 10193742 -130123023 + AT_rich Low_complexity Low_complexity 1 35 0 1720 178 7 0 chr10 10194315 10194602 -130122163 + AluSx SINE Alu 1 289 -23 1629 156 99 52 chr10 10194642 10195007 -130121758 + MLT1B LTR MaLR 1 382 -8 243 289 28 90 chr10 10195024 10195235 -130121530 - MLT1J LTR MaLR -75 436 239 188 268 197 14 chr10 10195484 10195555 -130121210 - L3 LINE CR1 -944 633 550 225 94 0 0 chr10 10196199 10196231 -130120534 + (TC)n Simple_repeat Simple_repeat 1 32 0 1493 214 20 3 chr10 10196775 10197074 -130119691 - MER2 DNA MER2_type 0 345 42 310 160 0 0 chr10 10197079 10197129 -130119636 + MER8 DNA MER2_type 190 239 0 405 325 87 28 chr10 10197395 10197845 -130118920 - L2 LINE L2 -193 3079 2554 3618 175 81 8 chr10 10197845 10198673 -130118092 - L1 LINE L1 -1238 4908 4021 279 347 49 62 chr10 10200377 10200746 -130116019 - L2 LINE L2 -452 2862 2499 416 310 116 31 chr10 10201254 10201676 -130115089 + L1M4 LINE L1 2947 3404 -2742 33 43 0 0 chr10 10201928 10201975 -130114790 + AT_rich Low_complexity Low_complexity 1 47 0 22 35 0 0 chr10 10202083 10202112 -130114653 + AT_rich Low_complexity Low_complexity 1 29 0 321 333 81 0 chr10 10202882 10203005 -130113760 + L1M4 LINE L1 3711 3843 -2303 314 304 55 40 chr10 10203009 10203210 -130113555 - LTR67 LTR ERVL -18 539 336 438 309 100 26 chr10 10203878 10204379 -130112386 + L1MEc LINE L1 1247 1784 -4612 1024 301 90 22 chr10 10204576 10206019 -130110746 + L1MEc LINE L1 2023 3529 -2686 949 238 60 75 chr10 10206084 10206537 -130110228 - MLT2B3 LTR ERVL -1 553 108 226 204 93 0 chr10 10206517 10206571 -130110194 - MLT2B2 LTR ERVL -334 181 123 * 372 220 40 10 chr10 10206576 10206676 -130110089 - MLT2B3 LTR ERVL -377 177 75 346 243 0 0 chr10 10206746 10206820 -130109945 - MLT2B3 LTR ERVL -479 75 2 323 279 119 27 chr10 10206842 10207136 -130109629 + L1MEc LINE L1 3740 4060 -2155 639 286 154 39 chr10 10207336 10208162 -130108603 + L1MEc LINE L1 4349 5278 -937 2209 78 0 0 chr10 10208162 10208476 -130108289 + AluSx SINE Alu 1 314 0 639 286 154 39 chr10 10208476 10208497 -130108268 + L1MEc LINE L1 5278 5295 -920 2069 159 30 5 chr10 10208498 10208869 -130107896 - MER6 DNA MER2_type -1 864 225 1190 237 116 75 chr10 10208875 10209571 -130107194 + MER50 LTR ERV1 10 734 0 987 178 115 5 chr10 10209571 10209776 -130106989 - MER6 DNA MER2_type -637 228 1 324 64 0 0 chr10 10209886 10209933 -130106832 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1569 251 52 24 chr10 10210405 10210867 -130105898 + MER74B LTR ERVL 71 545 -77 276 91 76 45 chr10 10210813 10210879 -130105886 - MER88 LTR ERVL -317 147 80 * 872 42 0 50 chr10 10210994 10211114 -130105651 - AluSg/x SINE Alu -19 291 178 883 142 0 22 chr10 10211197 10211380 -130105385 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 720 176 6 22 chr10 10211405 10211587 -130105178 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 602 216 6 0 chr10 10211612 10211788 -130104977 + (TCTG)n Simple_repeat Simple_repeat 4 180 0 734 185 12 8 chr10 10211806 10212067 -130104698 + (TCTA)n Simple_repeat Simple_repeat 1 262 0 272 277 4 2 chr10 10212122 10212225 -130104540 + L1MC/D LINE L1 4735 4838 -1308 30 89 0 0 chr10 10212349 10212428 -130104337 + AT_rich Low_complexity Low_complexity 1 79 0 360 292 167 5 chr10 10212552 10212768 -130103997 + L1MC/D LINE L1 5291 5534 -587 379 320 64 21 chr10 10212769 10213003 -130103762 + L1MC/D LINE L1 5573 5816 -1992 230 0 33 0 chr10 10213310 10213340 -130103425 + (TC)n Simple_repeat Simple_repeat 1 31 0 314 307 55 0 chr10 10213888 10214051 -130102714 + L1M4 LINE L1 4104 4275 -1871 180 111 0 0 chr10 10214085 10214112 -130102653 + (CA)n Simple_repeat Simple_repeat 2 28 0 347 327 18 5 chr10 10214866 10215086 -130101679 - L1M4 LINE L1 -2832 3314 3092 352 319 129 8 chr10 10215166 10215429 -130101336 - L1M4 LINE L1 -3166 2980 2686 13162 149 52 21 chr10 10215431 10217386 -130099379 - Tigger1 DNA MER2_type 0 2418 379 1190 83 12 6 chr10 10217386 10217555 -130099210 - L1PA7 LINE L1 -2 6152 5983 13162 149 52 21 chr10 10217555 10217943 -130098822 - Tigger1 DNA MER2_type -2039 379 4 248 274 48 48 chr10 10218003 10218171 -130098594 - L1M4 LINE L1 -3526 2620 2453 242 232 13 84 chr10 10218298 10218453 -130098312 + T-rich Low_complexity Low_complexity 3 146 0 28 29 0 0 chr10 10218977 10219012 -130097753 + AT_rich Low_complexity Low_complexity 1 35 0 409 293 121 25 chr10 10220679 10220877 -130095888 + MIR SINE MIR 30 246 -16 2168 139 0 0 chr10 10220998 10221308 -130095457 + AluSg SINE Alu 1 310 0 26 64 0 0 chr10 10221431 10221478 -130095287 + AT_rich Low_complexity Low_complexity 1 47 0 316 362 48 38 chr10 10221493 10221808 -130094957 - HAL1 LINE L1 -1076 1431 1114 375 338 124 10 chr10 10222396 10222686 -130094079 + MLT1K LTR MaLR 81 403 -185 34 24 0 0 chr10 10223416 10223457 -130093308 + AT_rich Low_complexity Low_complexity 1 41 0 1642 192 13 68 chr10 10223499 10223879 -130092886 - MLT1A2 LTR MaLR -15 359 1 38 61 0 0 chr10 10225179 10225245 -130091520 + AT_rich Low_complexity Low_complexity 1 66 0 284 326 20 14 chr10 10226107 10226254 -130090511 + (TATATG)n Simple_repeat Simple_repeat 5 152 0 532 316 40 29 chr10 10226262 10226537 -130090228 - LTR16B LTR ERVL -2 462 185 1339 217 10 59 chr10 10227309 10227491 -130089274 + MLT1A2 LTR MaLR 1 155 -219 2248 93 3 0 chr10 10227491 10227791 -130088974 + AluSx SINE Alu 1 301 -11 1339 217 10 59 chr10 10227791 10228000 -130088765 + MLT1A2 LTR MaLR 155 373 -1 1996 136 60 27 chr10 10228246 10228614 -130088151 - MSTC LTR MaLR -48 380 1 25 75 0 0 chr10 10229066 10229119 -130087646 + AT_rich Low_complexity Low_complexity 1 53 0 2139 110 0 0 chr10 10229149 10229468 -130087297 - AluSc SINE Alu 0 319 1 279 79 0 0 chr10 10229958 10229996 -130086769 + (A)n Simple_repeat Simple_repeat 1 38 0 2113 114 0 3 chr10 10230854 10231152 -130085613 - AluSx SINE Alu -15 297 1 21 0 0 0 chr10 10233908 10233929 -130082836 + AT_rich Low_complexity Low_complexity 1 21 0 433 269 123 41 chr10 10233932 10234151 -130082614 - MIR SINE MIR -8 254 18 1963 125 0 17 chr10 10234433 10234729 -130082036 - AluSq SINE Alu -22 291 1 412 299 0 9 chr10 10236091 10236198 -130080567 + L2 LINE L2 3188 3293 -20 2060 137 10 0 chr10 10236208 10236515 -130080250 - AluSx SINE Alu -2 310 1 524 239 104 18 chr10 10237881 10238044 -130078721 + MER5B DNA MER1_type 2 178 0 2175 114 3 13 chr10 10238647 10238955 -130077810 - AluSx SINE Alu -7 305 1 305 253 22 11 chr10 10239090 10239181 -130077584 + MER94 DNA DNA 9 100 -34 2427 164 0 5 chr10 10239353 10239773 -130076992 - MSTA LTR MaLR -2 426 9 23 0 0 0 chr10 10240821 10240844 -130075921 + AT_rich Low_complexity Low_complexity 1 23 0 37 52 0 0 chr10 10240890 10240948 -130075817 + AT_rich Low_complexity Low_complexity 1 58 0 656 161 0 0 chr10 10241113 10241231 -130075534 + Ricksha DNA DNA 2 119 -1062 1177 126 10 10 chr10 10241243 10241441 -130075324 + Ricksha DNA DNA 240 437 -2809 1871 164 55 24 chr10 10241441 10241989 -130074776 - MLT2A2 LTR ERVL 0 554 1 12667 160 35 19 chr10 10241989 10242347 -130074418 + Ricksha DNA DNA 433 784 -2462 2073 186 45 102 chr10 10242347 10242891 -130073874 + LTR9 LTR ERV1 1 504 -108 2102 115 0 7 chr10 10242891 10243187 -130073578 - AluSg SINE Alu -16 294 1 2073 186 45 102 chr10 10243187 10243291 -130073474 + LTR9 LTR ERV1 504 612 0 12667 160 35 19 chr10 10243291 10243940 -130072825 + Ricksha DNA DNA 784 1421 -1825 1971 130 0 61 chr10 10243940 10244270 -130072495 + AluSx SINE Alu 3 312 0 12667 160 35 19 chr10 10244270 10245948 -130070817 + Ricksha DNA DNA 1421 3238 -8 547 330 98 55 chr10 10245990 10246896 -130069869 - L2 LINE L2 -444 2870 1926 394 282 96 6 chr10 10247059 10247215 -130069550 - L1MC/D LINE L1 -2027 5781 5612 2010 112 54 0 chr10 10247494 10247772 -130068993 + AluSq SINE Alu 1 293 -20 206 107 71 0 chr10 10248177 10248233 -130068532 + GA-rich Low_complexity Low_complexity 3 62 0 22 35 0 0 chr10 10248273 10248302 -130068463 + AT_rich Low_complexity Low_complexity 1 29 0 793 139 0 0 chr10 10249042 10249171 -130067594 - L1PB1 LINE L1 0 6151 6023 641 168 16 0 chr10 10249239 10249364 -130067401 - L1PB1 LINE L1 -2 6149 6023 278 271 24 12 chr10 10249401 10249486 -130067279 + MIR3 SINE MIR 116 201 -7 2351 116 58 0 chr10 10250899 10251243 -130065522 + THE1B LTR MaLR 1 364 0 291 309 9 74 chr10 10251389 10251606 -130065159 + L2 LINE L2 1910 2112 -1202 292 296 114 45 chr10 10251932 10252152 -130064613 + MIR SINE MIR 4 238 -24 222 364 48 43 chr10 10252182 10252534 -130064231 + L2 LINE L2 2575 2928 -386 446 286 11 14 chr10 10255353 10255490 -130061275 + MIR SINE MIR 37 172 -36 2111 136 37 8 chr10 10255748 10256102 -130060663 + THE1B LTR MaLR 1 364 0 1278 177 8 21 chr10 10256168 10256411 -130060354 - AluJo SINE Alu 0 312 73 205 332 33 75 chr10 10256524 10256765 -130060000 + L2 LINE L2 2507 2737 -577 585 52 0 0 chr10 10257159 10257236 -130059529 + (TGAA)n Simple_repeat Simple_repeat 1 77 0 1568 177 3 52 chr10 10258986 10259296 -130057469 + AluJo SINE Alu 3 297 -15 221 345 109 0 chr10 10261093 10261203 -130055562 + MIR SINE MIR 5 126 -136 1778 171 10 16 chr10 10261548 10261858 -130054907 + AluJo SINE Alu 1 308 -4 2880 6 0 0 chr10 10261930 10262241 -130054524 + AluYa5 SINE Alu 1 311 0 1560 226 32 27 chr10 10262950 10263388 -130053377 - LTR47B LTR ERVL -3 440 1 2383 95 0 0 chr10 10264357 10264663 -130052102 - AluSx SINE Alu -6 306 1 976 105 0 14 chr10 10265168 10265311 -130051454 - AluSg/x SINE Alu 0 312 172 2239 92 3 22 chr10 10265314 10265628 -130051137 - AluSx SINE Alu -4 308 1 293 303 25 17 chr10 10266042 10266161 -130050604 - L3b LINE CR1 -202 1381 1262 1583 185 7 26 chr10 10266241 10266543 -130050222 + AluJo SINE Alu 1 296 -16 2141 95 0 7 chr10 10266547 10266854 -130049911 + AluSg SINE Alu 1 305 0 266 267 22 11 chr10 10266995 10267085 -130049680 + Charlie7 DNA MER1_type 1 91 -2521 2151 112 7 0 chr10 10267096 10267392 -130049373 + AluY SINE Alu 1 298 -13 918 257 36 41 chr10 10267396 10267808 -130048957 - L1ME2 LINE L1 -2 6162 5753 362 287 29 22 chr10 10267818 10267954 -130048811 - L1MDa LINE L1 -4022 2518 2382 3356 237 45 46 chr10 10267956 10269798 -130046967 - L1MD2 LINE L1 -21 6732 4898 649 237 0 0 chr10 10269808 10269926 -130046839 - FLAM_C SINE Alu -25 118 1 312 180 27 54 chr10 10269926 10270037 -130046728 - L1MD2 LINE L1 -1640 4900 4793 * 875 201 53 26 chr10 10270022 10270361 -130046404 - L1MD2 LINE L1 -2919 3621 3274 239 215 0 15 chr10 10270345 10270410 -130046355 - L1ME2 LINE L1 -493 5749 5686 * 1637 210 89 29 chr10 10270460 10271045 -130045720 - L1MD2 LINE L1 -4902 1638 1019 428 50 0 17 chr10 10271047 10271107 -130045658 + (TTTC)n Simple_repeat Simple_repeat 4 62 0 245 245 20 119 chr10 10271628 10271779 -130044986 - L1MD2 LINE L1 -5589 951 816 303 285 41 16 chr10 10271959 10272082 -130044683 - L1MD2 LINE L1 -6357 183 58 487 256 6 18 chr10 10272152 10272316 -130044449 - L1MEc LINE L1 -4314 2082 1921 892 176 29 33 chr10 10272502 10272712 -130044053 - MLT2B1 LTR ERVL -11 509 301 2219 87 47 3 chr10 10273399 10273699 -130043066 + AluSp SINE Alu 1 313 0 560 264 57 60 chr10 10273723 10274041 -130042724 - LTR16A1 LTR ERVL 0 457 141 220 158 70 0 chr10 10274454 10274511 -130042254 + (TA)n Simple_repeat Simple_repeat 2 62 0 992 160 0 0 chr10 10274545 10274695 -130042070 - FRAM SINE Alu -30 146 1 24 32 0 0 chr10 10275588 10275619 -130041146 + AT_rich Low_complexity Low_complexity 1 31 0 269 197 79 0 chr10 10275877 10275953 -130040812 + MIR SINE MIR 105 186 -76 207 100 0 0 chr10 10276532 10276562 -130040203 + (TCC)n Simple_repeat Simple_repeat 3 32 0 248 275 29 0 chr10 10276817 10276886 -130039879 - MIR SINE MIR -108 154 84 357 282 14 112 chr10 10277637 10277985 -130038780 + MER90 LTR ERV1 294 607 -7 2278 60 0 7 chr10 10278108 10278422 -130038343 - AluY SINE Alu 0 312 1 201 39 0 0 chr10 10278764 10278790 -130037975 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2094 145 0 10 chr10 10280047 10280351 -130036414 - AluSx SINE Alu -9 303 3 677 257 53 56 chr10 10280352 10280804 -130035961 - HsTC2 DNA Tc2 -14 1884 1247 4821 82 5 0 chr10 10281454 10282097 -130034668 - L1PA10 LINE L1 -4 6164 5519 692 257 32 11 chr10 10284194 10284381 -130032384 + MER20 DNA MER1_type 17 207 -12 605 284 47 5 chr10 10285362 10285577 -130031188 - MER58A DNA MER1_type 0 224 1 24 32 0 0 chr10 10286159 10286190 -130030575 + AT_rich Low_complexity Low_complexity 1 31 0 2111 115 3 10 chr10 10286783 10287087 -130029678 + AluSq SINE Alu 1 302 -11 228 259 0 0 chr10 10287115 10287169 -130029596 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 2824 25 0 0 chr10 10287544 10287859 -130028906 - AluYb8 SINE Alu -3 315 1 189 74 0 0 chr10 10288791 10288818 -130027947 + (T)n Simple_repeat Simple_repeat 1 27 0 22 0 0 0 chr10 10288830 10288852 -130027913 + AT_rich Low_complexity Low_complexity 1 22 0 40575 37 2 7 chr10 10288943 10294739 -130022026 + L1PA3 LINE L1 390 6155 0 29 28 0 0 chr10 10294739 10294775 -130021990 + AT_rich Low_complexity Low_complexity 1 36 0 741 268 91 50 chr10 10294817 10295213 -130021552 - MLT1G1 LTR MaLR -183 412 1 23 33 0 0 chr10 10296381 10296411 -130020354 + AT_rich Low_complexity Low_complexity 1 30 0 413 286 166 45 chr10 10296636 10296941 -130019824 - L1ME3 LINE L1 -211 5951 5684 2552 47 3 0 chr10 10296941 10297240 -130019525 + AluY SINE Alu 1 300 -11 413 286 166 45 chr10 10297240 10297553 -130019212 - L1ME3 LINE L1 -478 5684 5258 745 290 86 17 chr10 10297630 10298151 -130018614 - L1ME3 LINE L1 -1091 5055 4499 1990 181 22 54 chr10 10298368 10298438 -130018327 - Tigger2a DNA MER2_type -2274 434 363 2205 113 7 0 chr10 10298438 10298739 -130018026 - AluSx SINE Alu -9 303 1 1990 181 22 54 chr10 10298739 10299116 -130017649 - Tigger2a DNA MER2_type -2345 363 1 370 292 36 70 chr10 10299141 10299525 -130017240 - L1ME3 LINE L1 -1984 4162 3792 28 0 0 0 chr10 10300907 10300935 -130015830 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 10301254 10301275 -130015490 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 10301319 10301340 -130015425 + AT_rich Low_complexity Low_complexity 1 21 0 2299 93 3 0 chr10 10301718 10302020 -130014745 - AluSx SINE Alu -9 303 1 27 0 0 0 chr10 10302154 10302181 -130014584 + AT_rich Low_complexity Low_complexity 1 27 0 2125 135 3 0 chr10 10302211 10302523 -130014242 - AluSq SINE Alu 0 313 1 23 33 0 0 chr10 10302552 10302582 -130014183 + AT_rich Low_complexity Low_complexity 1 30 0 231 265 52 44 chr10 10302741 10302877 -130013888 + L1M4 LINE L1 4802 4938 -1208 2295 275 62 10 chr10 10303035 10304017 -130012748 + L1MC3 LINE L1 344 1375 -4849 4067 179 35 15 chr10 10304025 10305286 -130011479 + L1PB4 LINE L1 4843 6129 -27 * 11212 207 32 13 chr10 10305275 10309070 -130007695 + L1PA16 LINE L1 2300 6166 0 1424 236 63 9 chr10 10309063 10309504 -130007261 + L1MC3 LINE L1 4299 4763 -1801 * 1927 224 23 121 chr10 10309504 10310168 -130006597 + MER77 LTR ERV1 3 601 -4 2470 228 48 63 chr10 10310172 10310205 -130006560 + L1MC3 LINE L1 4757 4789 -1775 2296 87 10 0 chr10 10310205 10310494 -130006271 + AluSc SINE Alu 1 292 -17 2470 228 48 63 chr10 10310494 10312072 -130004693 + L1MC3 LINE L1 4789 5821 -743 376 197 88 80 chr10 10314069 10314206 -130002559 - L2 LINE L2 -1 3312 3175 2762 145 19 11 chr10 10314236 10314713 -130002052 - L1PA15 LINE L1 -17 6148 5668 461 313 18 0 chr10 10314770 10314936 -130001829 - L1M4 LINE L1 -1050 5096 4928 2173 112 42 31 chr10 10314987 10315345 -130001420 + THE1B LTR MaLR 3 364 0 287 266 93 85 chr10 10315508 10316004 -130000761 - L1M4 LINE L1 -1541 4605 4106 1675 194 71 8 chr10 10316066 10316431 -130000334 - MLT1B LTR MaLR -2 388 1 462 233 167 11 chr10 10316460 10316730 -130000035 - L1MDa LINE L1 -3663 2877 2566 326 206 137 55 chr10 10316749 10316895 -129999870 - L1MDa LINE L1 -3966 2574 2417 2447 48 3 45 chr10 10317271 10317585 -129999180 - AluY SINE Alu -8 303 3 667 297 21 5 chr10 10317587 10317779 -129998986 - L2 LINE L2 -599 2715 2521 1647 251 87 50 chr10 10317787 10318364 -129998401 - MER77 LTR ERV1 -7 598 1 734 346 85 0 chr10 10318392 10318733 -129998032 - L2 LINE L2 -868 2446 2077 2087 110 7 7 chr10 10319204 10319496 -129997269 + AluSp SINE Alu 4 295 -18 427 281 85 26 chr10 10319532 10319802 -129996963 - L1ME2 LINE L1 -213 5951 5666 281 277 24 0 chr10 10320167 10320250 -129996515 + L1MC4a LINE L1 5603 5687 -2121 479 235 132 52 chr10 10320280 10320667 -129996098 + L1MC4a LINE L1 5757 6174 -1634 1225 290 89 29 chr10 10320796 10321523 -129995242 + L1MC4 LINE L1 7122 7892 -150 22 0 0 0 chr10 10321754 10321776 -129994989 + AT_rich Low_complexity Low_complexity 1 22 0 1304 299 72 52 chr10 10321920 10322888 -129993877 + L2 LINE L2 2328 3313 0 315 267 35 0 chr10 10323313 10323399 -129993366 - L2 LINE L2 -2 3270 3182 23 0 0 0 chr10 10324186 10324209 -129992556 + AT_rich Low_complexity Low_complexity 1 23 0 2018 154 0 7 chr10 10325696 10326002 -129990763 - AluSg SINE Alu -6 304 1 1414 215 44 9 chr10 10326104 10326420 -129990345 + MSTD LTR MaLR 70 396 0 571 320 254 19 chr10 10326426 10327060 -129989705 - L2 LINE L2 -527 2787 2005 198 167 0 0 chr10 10327317 10327353 -129989412 + (CA)n Simple_repeat Simple_repeat 1 36 0 48 43 0 0 chr10 10327691 10327760 -129989005 + AT_rich Low_complexity Low_complexity 1 69 0 1191 111 23 0 chr10 10327763 10327923 -129988842 - AluSp SINE Alu -19 294 128 2396 80 0 3 chr10 10327923 10328235 -129988530 - AluY SINE Alu 0 311 1 333 291 41 64 chr10 10329463 10329635 -129987130 - L1 LINE L1 -860 5286 5119 25 0 0 0 chr10 10330292 10330317 -129986448 + AT_rich Low_complexity Low_complexity 1 25 0 1982 132 3 16 chr10 10330339 10330642 -129986123 + AluSx SINE Alu 1 299 -13 2493 70 0 0 chr10 10330743 10331043 -129985722 - AluY SINE Alu -11 300 1 41 72 0 0 chr10 10331133 10331216 -129985549 + AT_rich Low_complexity Low_complexity 1 83 0 220 299 90 0 chr10 10331249 10331316 -129985449 - L2 LINE L2 -44 3269 3197 186 43 0 0 chr10 10331416 10331439 -129985326 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 401 265 78 54 chr10 10331867 10332033 -129984732 + MLT1L LTR MaLR 252 421 -194 1743 152 61 25 chr10 10332417 10332779 -129983986 + THE1C LTR MaLR 1 375 0 22 56 0 0 chr10 10333232 10333268 -129983497 + AT_rich Low_complexity Low_complexity 1 36 0 266 306 49 9 chr10 10334053 10334175 -129982590 - MIR SINE MIR -81 127 4 562 241 216 10 chr10 10334214 10334413 -129982352 - MIR SINE MIR -16 246 7 288 308 39 0 chr10 10334512 10334590 -129982175 + L2 LINE L2 3195 3275 -38 1053 211 75 0 chr10 10334604 10334713 -129982052 - L1MA9 LINE L1 -39 6273 6174 186 43 0 0 chr10 10334713 10334736 -129982029 + (TG)n Simple_repeat Simple_repeat 1 23 0 1053 211 75 0 chr10 10334736 10334892 -129981873 - L1MA9 LINE L1 -138 6174 5988 232 246 18 0 chr10 10335290 10335347 -129981418 + MIR SINE MIR 82 139 -123 301 273 73 9 chr10 10335810 10335920 -129980845 - MER106B DNA MER1_type 0 1059 943 1113 255 96 32 chr10 10335920 10336359 -129980406 - MLT1C LTR MaLR 0 467 1 1925 135 0 122 chr10 10336379 10336763 -129980002 + MER1B DNA MER1_type 1 337 0 351 44 0 0 chr10 10336766 10336811 -129979954 + (TG)n Simple_repeat Simple_repeat 2 46 0 856 274 18 14 chr10 10336934 10337157 -129979608 + MER58A DNA MER1_type 1 224 0 22 0 0 0 chr10 10337590 10337612 -129979153 + AT_rich Low_complexity Low_complexity 1 22 0 3874 177 99 10 chr10 10337742 10338531 -129978234 - MER21B LTR ERV1 -4 859 1 309 267 50 50 chr10 10338591 10338711 -129978054 - MIR SINE MIR -113 149 30 800 176 8 0 chr10 10339346 10339477 -129977288 - FLAM_C SINE Alu -11 132 1 203 169 51 0 chr10 10339500 10339559 -129977206 + (TA)n Simple_repeat Simple_repeat 2 63 0 208 130 87 0 chr10 10339592 10339684 -129977081 + (TA)n Simple_repeat Simple_repeat 1 100 0 1721 189 70 44 chr10 10339696 10340150 -129976615 + MLT1D LTR MaLR 40 505 0 2165 115 3 3 chr10 10340856 10341152 -129975613 - AluSx SINE Alu -16 296 1 984 221 4 35 chr10 10341644 10341870 -129974895 - MER20 DNA MER1_type 0 219 1 324 322 99 67 chr10 10343214 10343962 -129972803 + HAL1 LINE L1 57 828 -1679 1923 264 63 22 chr10 10344151 10344734 -129972031 + L1MDa LINE L1 1 607 -5933 529 255 29 21 chr10 10344763 10345012 -129971753 + L1MDa LINE L1 1078 1355 -5188 862 238 45 77 chr10 10345021 10345400 -129971365 + L1MDa LINE L1 2942 3308 -3232 508 262 0 24 chr10 10345394 10345520 -129971245 + L1MD2 LINE L1 6031 6153 -206 * 384 290 28 0 chr10 10345508 10345653 -129971112 + L1MD3 LINE L1 7832 7980 -15 * 305 320 59 10 chr10 10345692 10345895 -129970870 + HAL1 LINE L1 1107 1319 -1188 21 0 0 0 chr10 10345945 10345966 -129970799 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 10346628 10346649 -129970116 + AT_rich Low_complexity Low_complexity 1 21 0 403 317 24 77 chr10 10347420 10347628 -129969137 + MLT1J2 LTR MaLR 2 198 -248 1429 190 20 14 chr10 10347873 10347921 -129968844 + L1MB2 LINE L1 5452 5498 -686 6368 152 50 7 chr10 10347921 10349100 -129967665 + Tigger3b DNA MER2_type 2 1231 0 1429 190 20 14 chr10 10349100 10349346 -129967419 + L1MB2 LINE L1 5498 5748 -436 412 214 22 0 chr10 10349387 10349476 -129967289 - L1MB1 LINE L1 -274 5894 5804 753 288 32 21 chr10 10349478 10349522 -129967243 - L1M4 LINE L1 -1832 4314 4272 487 56 127 0 chr10 10349522 10349593 -129967172 + MADE1 DNA Mariner 1 80 0 753 288 32 21 chr10 10349593 10349833 -129966932 - L1M4 LINE L1 -1874 4272 4027 6939 109 12 6 chr10 10349866 10351000 -129965765 - L1MA3 LINE L1 -6 6299 5158 230 202 40 56 chr10 10351051 10351176 -129965589 - L1M4 LINE L1 -2160 3986 3864 254 88 263 0 chr10 10351222 10351279 -129965486 + L1PA14 LINE L1 6090 6161 0 832 214 22 2 chr10 10351364 10351554 -129965211 + L1MB2 LINE L1 5900 6092 -79 4897 134 24 22 chr10 10351744 10352578 -129964187 - L1PA15 LINE L1 -5 6160 5325 388 131 107 0 chr10 10352579 10352663 -129964102 + L1MB2 LINE L1 6077 6169 -2 534 186 0 0 chr10 10352729 10352831 -129963934 + L1MB8 LINE L1 6071 6172 -6 216 302 62 31 chr10 10353200 10353296 -129963469 + MIR SINE MIR 18 116 -92 219 170 0 0 chr10 10353326 10353373 -129963392 + (TA)n Simple_repeat Simple_repeat 1 47 0 1675 171 0 7 chr10 10354676 10354956 -129961809 + AluSx SINE Alu 23 300 -12 238 254 17 0 chr10 10355072 10355131 -129961634 + MLT1H1 LTR MaLR 30 89 -466 765 245 8 59 chr10 10355281 10355518 -129961247 + MLT1H1 LTR MaLR 329 553 -2 524 249 31 13 chr10 10355808 10355991 -129960774 + MLT1H LTR MaLR 372 549 0 24 0 0 0 chr10 10356969 10356993 -129959772 + AT_rich Low_complexity Low_complexity 1 24 0 1925 149 16 43 chr10 10358014 10358384 -129958381 + THE1B LTR MaLR 5 364 0 180 0 0 0 chr10 10358435 10358455 -129958310 + (CA)n Simple_repeat Simple_repeat 2 21 0 334 107 0 14 chr10 10358868 10359070 -129957695 + AluSx SINE Alu 26 291 -9 1876 134 31 0 chr10 10360609 10360900 -129955865 + AluSx SINE Alu 1 300 -12 189 310 35 0 chr10 10361172 10361230 -129955535 - L2 LINE L2 -4 3309 3250 25 31 0 0 chr10 10361264 10361296 -129955469 + AT_rich Low_complexity Low_complexity 1 32 0 358 294 44 15 chr10 10361491 10361627 -129955138 + MIR SINE MIR 53 192 -70 251 0 0 56 chr10 10361928 10361964 -129954801 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 502 304 124 55 chr10 10362027 10362550 -129954215 + L1MEd LINE L1 536 1094 -5025 1800 163 3 13 chr10 10362553 10362854 -129953911 + AluSx SINE Alu 1 298 -14 5352 129 12 37 chr10 10363532 10363609 -129953156 + L1PB3 LINE L1 5254 5331 -823 2174 109 3 10 chr10 10363609 10363921 -129952844 + AluSx SINE Alu 1 310 -2 5352 129 12 37 chr10 10363921 10364765 -129952000 + L1PB3 LINE L1 5331 6152 -2 314 333 0 8 chr10 10365315 10365441 -129951324 + L1ME LINE L1 5639 5763 -407 2114 143 0 0 chr10 10365631 10365938 -129950827 + AluSx SINE Alu 1 307 -5 24 53 0 0 chr10 10366097 10366135 -129950630 + AT_rich Low_complexity Low_complexity 1 38 0 512 168 0 19 chr10 10367392 10367499 -129949266 + (TATATG)n Simple_repeat Simple_repeat 6 110 0 241 152 0 0 chr10 10367505 10367551 -129949214 - LTR66 LTR ERVL -171 439 394 284 161 16 0 chr10 10367592 10367654 -129949111 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 25 65 0 0 chr10 10367668 10367714 -129949051 + AT_rich Low_complexity Low_complexity 1 46 0 439 289 57 38 chr10 10367913 10368055 -129948710 + L1ME3A LINE L1 5717 5866 -304 375 167 0 71 chr10 10368055 10368139 -129948626 - MADE1 DNA Mariner 0 80 3 439 289 57 38 chr10 10368139 10368207 -129948558 + L1ME3A LINE L1 5866 5931 -239 1341 225 126 39 chr10 10370368 10370732 -129946033 - MSTD LTR MaLR 0 396 1 795 51 0 0 chr10 10373516 10373614 -129943151 + HY3 scRNA scRNA 2 99 -2 180 176 0 0 chr10 10373739 10373773 -129942992 + (TA)n Simple_repeat Simple_repeat 2 35 0 183 346 72 53 chr10 10376418 10376626 -129940139 + MIR SINE MIR 34 245 -17 552 77 0 0 chr10 10376721 10376799 -129939966 - L1PA7 LINE L1 -2 6152 6075 1550 59 17 59 chr10 10377854 10378092 -129938673 + L1PA8 LINE L1 5939 6166 -6 665 178 62 0 chr10 10378105 10378234 -129938531 - AluSg/x SINE Alu -6 306 170 253 179 0 0 chr10 10378337 10378376 -129938389 - Alu SINE Alu -263 39 1 264 241 9 125 chr10 10378433 10378508 -129938257 + L1M4 LINE L1 4008 4069 -2077 1639 62 0 0 chr10 10378508 10378723 -129938042 + AluY SINE Alu 86 300 0 264 241 9 125 chr10 10378723 10378758 -129938007 + L1M4 LINE L1 4069 4106 -2040 1186 272 113 24 chr10 10378758 10379110 -129937655 + L1MEc LINE L1 292 712 -5684 2062 176 51 10 chr10 10379110 10379524 -129937241 + MSTB1 LTR MaLR 2 432 0 1186 272 113 24 chr10 10379524 10379722 -129937043 + L1MEc LINE L1 712 891 -5505 634 263 61 5 chr10 10379729 10379942 -129936823 + L1MC2 LINE L1 34 258 -6168 3073 219 105 29 chr10 10379943 10381098 -129935667 + L1MC2 LINE L1 778 2019 -4407 1316 252 24 0 chr10 10381104 10381441 -129935324 - L1M1 LINE L1 -4533 3032 2688 1092 167 34 5 chr10 10381443 10381647 -129935118 + MER2 DNA MER2_type 2 211 -134 2454 63 0 3 chr10 10381689 10381989 -129934776 - AluY SINE Alu -12 299 1 1642 235 29 29 chr10 10382048 10382815 -129933950 - L1M3c LINE L1 -4520 2517 1810 1401 279 77 3 chr10 10383060 10383437 -129933328 - L1M3c LINE L1 -6619 411 7 6059 257 37 20 chr10 10383450 10385852 -129930913 + L1MC2 LINE L1 2054 4492 -1934 359 148 0 0 chr10 10385852 10385930 -129930835 + AluSp/q SINE Alu 233 310 0 6059 257 37 20 chr10 10385930 10386226 -129930539 + L1MC2 LINE L1 4492 4781 -1645 1474 218 112 4 chr10 10386388 10386878 -129929887 + L1MC2 LINE L1 4799 5341 -1085 39 74 0 0 chr10 10386898 10386979 -129929786 + AT_rich Low_complexity Low_complexity 1 81 0 25 0 0 0 chr10 10387069 10387094 -129929671 + AT_rich Low_complexity Low_complexity 1 25 0 5698 134 38 3 chr10 10387258 10388477 -129928288 - L1PA13 LINE L1 -13 6150 4888 5094 187 37 13 chr10 10388479 10389708 -129927057 + L1MC2 LINE L1 5360 6618 -6 2364 262 133 31 chr10 10389715 10391930 -129924835 + L1MEc LINE L1 878 3300 -2915 2231 120 0 0 chr10 10392556 10392865 -129923900 - AluSg SINE Alu -1 309 1 2724 131 22 77 chr10 10396162 10396836 -129919929 - MER4B LTR ERV1 0 903 3 1718 209 99 16 chr10 10396940 10397384 -129919381 - LTR29 LTR ERV1 -3 619 139 2159 82 17 0 chr10 10397420 10397711 -129919054 - MER41A LTR ERV1 0 554 259 5134 125 97 127 chr10 10397711 10399312 -129917453 + pTR5 LTR ERV1 745 2438 0 1571 118 73 0 chr10 10399315 10399561 -129917204 - MER41A LTR ERV1 -290 264 1 248 264 0 35 chr10 10399561 10399623 -129917142 - MER34 LTR ERV1 -483 59 1 1239 258 127 19 chr10 10399889 10400369 -129916396 - LTR10B LTR ERV1 -3 544 13 276 260 13 0 chr10 10400616 10400693 -129916072 - MER67B LTR ERV1 -2 659 582 1532 137 42 78 chr10 10400709 10401068 -129915697 + MER4A LTR ERV1 1 346 -318 481 185 237 63 chr10 10401078 10401348 -129915417 + MER4C LTR ERV1 149 465 0 1487 180 21 80 chr10 10401354 10401391 -129915374 - MER31B LTR ERV1 -101 365 327 1206 200 39 58 chr10 10401391 10401701 -129915064 + AluJo SINE Alu 1 304 -8 1487 180 21 80 chr10 10401701 10402040 -129914725 - MER31B LTR ERV1 -139 327 11 263 175 0 32 chr10 10403376 10403439 -129913326 + (TATG)n Simple_repeat Simple_repeat 4 64 0 1871 181 85 57 chr10 10403520 10404016 -129912749 + MER67D LTR ERV1 1 510 -4 670 240 65 99 chr10 10404618 10405086 -129911679 + MER110 LTR ERV1 61 491 0 202 345 12 0 chr10 10405122 10405206 -129911559 + L2 LINE L2 2606 2690 -624 6697 261 86 24 chr10 10405928 10410070 -129906695 - L1ME1 LINE L1 -21 6214 1863 5314 163 40 6 chr10 10410119 10411097 -129905668 - L1MC1 LINE L1 0 6333 5323 22 0 0 0 chr10 10411546 10411568 -129905197 + AT_rich Low_complexity Low_complexity 1 22 0 298 256 41 60 chr10 10411768 10412073 -129904692 - L1ME1 LINE L1 -4533 1863 1463 428 296 79 4 chr10 10412092 10412359 -129904406 - L1ME1 LINE L1 -5030 1366 1080 1745 276 77 51 chr10 10412369 10412416 -129904349 - L1ME1 LINE L1 -5451 945 901 1661 152 44 3 chr10 10412416 10412713 -129904052 - AluJo SINE Alu -3 309 1 1745 276 77 51 chr10 10412713 10412865 -129903900 - L1ME1 LINE L1 -5495 901 754 2085 117 0 0 chr10 10412865 10413155 -129903610 + AluSx SINE Alu 1 290 -22 1745 276 77 51 chr10 10413155 10413815 -129902950 - L1ME1 LINE L1 -5642 754 63 459 0 0 0 chr10 10414432 10414483 -129902282 + (TA)n Simple_repeat Simple_repeat 1 51 0 225 0 0 0 chr10 10414482 10414507 -129902258 + (CA)n Simple_repeat Simple_repeat 2 26 0 * 648 169 5 33 chr10 10414758 10414942 -129901823 + CT-rich Low_complexity Low_complexity 2 180 0 270 0 0 0 chr10 10415546 10415576 -129901189 + (TG)n Simple_repeat Simple_repeat 1 30 0 308 227 57 136 chr10 10416342 10416518 -129900247 - MIR SINE MIR -42 220 59 26 0 0 0 chr10 10417259 10417285 -129899480 + AT_rich Low_complexity Low_complexity 1 26 0 347 271 187 6 chr10 10417342 10417508 -129899257 - L2 LINE L2 0 3313 3118 3533 109 16 3 chr10 10417653 10418289 -129898476 + L1P5 LINE L1 5141 5783 -368 335 234 32 11 chr10 10418300 10418386 -129898379 - L1MC4 LINE L1 -1339 6703 6613 2404 97 25 0 chr10 10418386 10418747 -129898018 + L1PB1 LINE L1 5782 6151 0 9958 19 1 35 chr10 10418945 10420910 -129895855 + L1PA3 LINE L1 4216 6150 -5 189 0 0 0 chr10 10420940 10420961 -129895804 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 22 70 0 0 chr10 10421737 10421780 -129894985 + AT_rich Low_complexity Low_complexity 1 43 0 718 266 60 75 chr10 10422118 10422570 -129894195 - HAL1 LINE L1 -675 1832 1388 440 294 24 59 chr10 10422781 10422951 -129893814 - HAL1 LINE L1 -1234 1273 1110 1933 148 3 7 chr10 10422998 10423302 -129893463 + AluSx SINE Alu 1 303 -9 4804 63 27 3 chr10 10424280 10424918 -129891847 - L1PA8 LINE L1 -6 6166 5514 24 32 0 0 chr10 10426102 10426133 -129890632 + AT_rich Low_complexity Low_complexity 1 31 0 3017 174 50 20 chr10 10426133 10426817 -129889948 - L1MA6 LINE L1 -4 6296 5593 981 172 0 91 chr10 10426823 10427021 -129889744 - AluJo SINE Alu -30 282 103 753 185 0 15 chr10 10427040 10427175 -129889590 - AluJo SINE Alu -177 135 3 1582 207 8 6 chr10 10427175 10427528 -129889237 - L1MA6 LINE L1 -690 5610 5257 1530 210 3 20 chr10 10427539 10427834 -129888931 - AluJo SINE Alu -22 290 1 320 296 0 10 chr10 10428157 10428255 -129888510 + (TA)n Simple_repeat Simple_repeat 1 97 0 351 150 0 0 chr10 10428280 10428340 -129888425 + (TGGA)n Simple_repeat Simple_repeat 4 63 0 369 102 0 0 chr10 10428978 10429037 -129887728 + (TATG)n Simple_repeat Simple_repeat 2 60 0 253 323 65 8 chr10 10429694 10429818 -129886947 + MIR SINE MIR 120 250 -12 264 253 195 0 chr10 10429843 10429930 -129886835 - L2 LINE L2 0 3313 3210 361 185 39 15 chr10 10429962 10430092 -129886673 + (TA)n Simple_repeat Simple_repeat 2 134 0 216 172 54 11 chr10 10430105 10430198 -129886567 + (TA)n Simple_repeat Simple_repeat 2 98 0 314 289 0 11 chr10 10430198 10430288 -129886477 - L1MC4 LINE L1 -1340 6702 6614 * 327 261 11 33 chr10 10430221 10430313 -129886452 + L1MC4 LINE L1 6614 6703 -1339 341 121 65 25 chr10 10430313 10430712 -129886053 + (TA)n Simple_repeat Simple_repeat 1 415 0 271 221 35 9 chr10 10430724 10430837 -129885928 + (TA)n Simple_repeat Simple_repeat 1 116 0 564 212 43 86 chr10 10430868 10431123 -129885642 - L2 LINE L2 -157 3156 2913 245 254 0 70 chr10 10431243 10431314 -129885451 + L2 LINE L2 3203 3268 -4 288 239 28 0 chr10 10432703 10432774 -129883991 + L1ME LINE L1 5734 5806 -315 602 162 0 19 chr10 10434106 10434211 -129882554 - MLT1A2 LTR MaLR -271 103 1 1345 198 50 31 chr10 10434769 10435127 -129881638 - MLT1A1 LTR MaLR 0 365 1 271 251 17 31 chr10 10436317 10436435 -129880330 - MIR SINE MIR -63 145 32 396 373 65 31 chr10 10436505 10436827 -129879938 - L2 LINE L2 -923 2391 2059 258 241 133 12 chr10 10436858 10436941 -129879824 + MER46C DNA MER2_type 28 120 -218 315 307 50 0 chr10 10436996 10437097 -129879668 - HERVL LTR ERVL -3202 2452 2347 942 258 72 32 chr10 10437385 10437852 -129878913 + MER39 LTR ERV1 8 707 0 1469 243 111 4 chr10 10439125 10439577 -129877188 - MER97a DNA MER1_type? -11 883 384 6286 171 58 13 chr10 10439579 10441956 -129874809 - L1MA7 LINE L1 -9 6282 3807 1082 263 66 24 chr10 10441959 10442340 -129874425 - MER97a DNA MER1_type? -497 397 1 216 0 0 0 chr10 10443475 10443499 -129873266 + (CA)n Simple_repeat Simple_repeat 2 25 0 638 108 0 10 chr10 10443500 10443602 -129873163 + (TA)n Simple_repeat Simple_repeat 1 101 0 622 299 23 87 chr10 10444526 10444961 -129871804 + L2 LINE L2 2907 3313 0 266 326 20 20 chr10 10445689 10445787 -129870978 + MIR SINE MIR 27 124 -84 24 32 0 0 chr10 10445952 10445983 -129870782 + AT_rich Low_complexity Low_complexity 1 31 0 24 32 0 0 chr10 10446839 10446870 -129869895 + AT_rich Low_complexity Low_complexity 1 31 0 209 319 117 0 chr10 10447043 10447137 -129869628 + MIR3 SINE MIR 98 202 -6 1477 99 24 9 chr10 10447352 10447564 -129869201 - AluSp SINE Alu 0 313 99 1515 127 0 4 chr10 10448266 10448502 -129868263 - L1PB1 LINE L1 -1 6150 5916 856 136 39 7 chr10 10448503 10448559 -129868206 + L1PB1 LINE L1 5725 5778 -373 243 88 0 0 chr10 10448559 10448593 -129868172 + (TG)n Simple_repeat Simple_repeat 2 35 0 856 136 39 7 chr10 10448593 10448690 -129868075 + L1PB1 LINE L1 5778 5883 -268 3822 120 8 7 chr10 10449092 10449685 -129867080 + L1PA16 LINE L1 5571 6164 -2 2221 88 0 0 chr10 10450825 10451108 -129865657 - AluSx SINE Alu -19 293 11 1171 142 46 17 chr10 10451133 10451373 -129865392 - L1MA5A LINE L1 -6 6291 6045 339 133 67 78 chr10 10451410 10451500 -129865265 + MER103 DNA DNA 4 92 -74 270 193 0 0 chr10 10452127 10452184 -129864581 + (CA)n Simple_repeat Simple_repeat 2 58 0 243 114 0 0 chr10 10452549 10452593 -129864172 + (CTGTG)n Simple_repeat Simple_repeat 3 46 0 2181 111 3 23 chr10 10453354 10453661 -129863104 + AluSp SINE Alu 1 301 -12 3019 111 31 8 chr10 10453669 10454148 -129862617 - L1PA14 LINE L1 -2 6159 5670 1066 228 61 19 chr10 10455556 10455869 -129860896 + MLT1A2 LTR MaLR 6 424 -43 180 0 0 0 chr10 10455869 10455889 -129860876 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 1971 134 7 0 chr10 10455889 10456166 -129860599 - AluSq SINE Alu -26 287 9 871 295 126 28 chr10 10456235 10456665 -129860100 - L2 LINE L2 -18 3295 2824 185 203 119 51 chr10 10456741 10456800 -129859965 - L2 LINE L2 -1061 2253 2191 1604 161 9 77 chr10 10457185 10457509 -129859256 + AluJo SINE Alu 1 302 -10 902 175 19 19 chr10 10458114 10458274 -129858491 - FRAM SINE Alu -17 159 1 263 267 80 0 chr10 10459315 10459390 -129857375 + MIR3 SINE MIR 105 185 -23 1821 159 36 32 chr10 10459489 10459797 -129856968 + AluJo SINE Alu 1 309 -3 416 237 44 18 chr10 10459804 10459918 -129856847 + MER5A DNA MER1_type 73 189 0 253 330 53 48 chr10 10463998 10464225 -129852540 - MIR SINE MIR 0 262 35 1875 156 0 0 chr10 10464822 10465105 -129851660 - AluSx SINE Alu -27 285 3 321 354 84 14 chr10 10465198 10465413 -129851352 + L2 LINE L2 2480 2709 -605 180 0 0 0 chr10 10465814 10465834 -129850931 + (TAA)n Simple_repeat Simple_repeat 1 20 0 258 314 12 0 chr10 10466464 10466550 -129850215 + MARNA DNA Mariner 408 494 -92 22 35 0 0 chr10 10467196 10467225 -129849540 + AT_rich Low_complexity Low_complexity 1 29 0 5176 179 20 18 chr10 10467230 10468526 -129848239 + L1MC2 LINE L1 5040 6333 -11 727 270 87 36 chr10 10469137 10469470 -129847295 - MLT1J1 LTR MaLR -31 415 66 26 0 0 0 chr10 10469608 10469634 -129847131 + AT_rich Low_complexity Low_complexity 1 26 0 423 0 0 0 chr10 10471057 10471104 -129845661 + (CA)n Simple_repeat Simple_repeat 2 48 0 2341 95 0 13 chr10 10471646 10471952 -129844813 - AluSp SINE Alu -11 302 1 25 0 0 0 chr10 10471960 10471985 -129844780 + AT_rich Low_complexity Low_complexity 1 25 0 327 145 0 16 chr10 10472274 10472336 -129844429 - MER51A LTR ERV1 -279 355 295 193 362 14 0 chr10 10472430 10472499 -129844266 - L2 LINE L2 -560 2754 2685 2229 167 41 5 chr10 10472563 10472976 -129843789 - MSTA LTR MaLR 0 428 1 1507 172 61 8 chr10 10473363 10473522 -129843243 - AluJo SINE Alu -23 289 109 387 0 0 0 chr10 10473522 10473565 -129843200 + (TG)n Simple_repeat Simple_repeat 2 44 0 1507 172 61 8 chr10 10473565 10473666 -129843099 - AluJo SINE Alu -203 109 15 334 278 0 52 chr10 10473902 10474017 -129842748 + MER5A DNA MER1_type 4 112 -77 29 47 0 0 chr10 10474273 10474316 -129842449 + AT_rich Low_complexity Low_complexity 1 43 0 405 311 38 0 chr10 10474397 10474503 -129842262 - MER91C DNA MER1_type 0 140 31 503 191 37 37 chr10 10476310 10476446 -129840319 - L1MA5A LINE L1 -3 6294 6159 40909 43 11 2 chr10 10476742 10482826 -129833939 - L1PA4 LINE L1 -3 6152 12 811 165 0 15 chr10 10482888 10483021 -129833744 - FLAM_C SINE Alu -2 131 1 690 200 0 0 chr10 10483666 10483786 -129832979 + FLAM_C SINE Alu 1 120 -13 2595 91 16 11 chr10 10484091 10484464 -129832301 + THE1C LTR MaLR 1 375 0 360 0 0 0 chr10 10484496 10484536 -129832229 + (TA)n Simple_repeat Simple_repeat 1 40 0 26 74 0 0 chr10 10485468 10485522 -129831243 + AT_rich Low_complexity Low_complexity 1 54 0 387 284 59 75 chr10 10486187 10486493 -129830272 - L3 LINE CR1 -30 1547 1247 351 316 45 8 chr10 10486499 10486632 -129830133 + MIR SINE MIR 53 190 -72 221 367 99 29 chr10 10486825 10487063 -129829702 - L2 LINE L2 -178 3094 2816 186 103 0 0 chr10 10487063 10487092 -129829673 + (TAA)n Simple_repeat Simple_repeat 1 29 0 221 367 99 29 chr10 10487092 10487211 -129829554 - L2 LINE L2 -456 2816 2707 233 271 41 41 chr10 10487344 10487466 -129829299 - MER94 DNA DNA -8 126 5 255 31 0 0 chr10 10487762 10487794 -129828971 + (TG)n Simple_repeat Simple_repeat 2 33 0 2285 109 3 0 chr10 10488414 10488726 -129828039 - AluSp SINE Alu 0 313 1 238 328 43 43 chr10 10489901 10490017 -129826748 + L2 LINE L2 3138 3253 -19 2293 153 25 35 chr10 10490206 10490407 -129826358 + MSTA LTR MaLR 1 202 -226 2516 58 0 3 chr10 10490407 10490719 -129826046 + AluY SINE Alu 1 311 0 2293 153 25 35 chr10 10490719 10490949 -129825816 + MSTA LTR MaLR 202 428 0 207 100 0 0 chr10 10491710 10491740 -129825025 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 37 39 0 0 chr10 10492446 10492497 -129824268 + AT_rich Low_complexity Low_complexity 1 51 0 2054 137 0 13 chr10 10492874 10493187 -129823578 - AluSc SINE Alu 0 309 1 2568 97 6 0 chr10 10493207 10493568 -129823197 - L1PB1 LINE L1 0 6151 5789 505 106 18 18 chr10 10493577 10493690 -129823075 + (TCTA)n Simple_repeat Simple_repeat 4 116 0 2047 79 0 0 chr10 10493693 10493960 -129822805 - L1PB1 LINE L1 -360 5791 5525 28 0 0 0 chr10 10494415 10494443 -129822322 + AT_rich Low_complexity Low_complexity 1 28 0 1866 153 3 3 chr10 10494530 10494837 -129821928 - L1MC1 LINE L1 -11 6322 6016 3516 152 0 0 chr10 10494845 10495372 -129821393 - MER1A DNA MER1_type 0 527 1 723 206 12 0 chr10 10495377 10495542 -129821223 - L1MC1 LINE L1 -380 5953 5787 * 1138 236 46 18 chr10 10495541 10495825 -129820940 + L1M3e LINE L1 1238 1529 -5501 511 181 0 0 chr10 10495831 10495914 -129820851 + AluSg/x SINE Alu 205 287 -25 1910 112 33 4 chr10 10495925 10496201 -129820564 + AluSg SINE Alu 1 284 -26 24 32 0 0 chr10 10496201 10496232 -129820533 + AT_rich Low_complexity Low_complexity 1 31 0 3361 199 32 0 chr10 10496329 10497021 -129819744 - L1MCa LINE L1 -5619 807 94 2699 102 0 0 chr10 10497002 10497028 -129819737 + L1PA10 LINE L1 5574 5599 -569 * 1287 77 11 27 chr10 10497028 10497211 -129819554 - L1PA10 LINE L1 -7 6161 5982 2699 102 0 0 chr10 10497211 10497558 -129819207 + L1PA10 LINE L1 5598 5947 -221 388 230 35 0 chr10 10497555 10497642 -129819123 - L1MCa LINE L1 -6317 109 20 * 215 214 84 92 chr10 10498149 10498280 -129818485 - L2 LINE L2 -3 3310 3181 198 0 0 0 chr10 10499105 10499127 -129817638 + (A)n Simple_repeat Simple_repeat 1 22 0 1770 128 20 99 chr10 10499210 10499555 -129817210 + AluYb8 SINE Alu 1 318 0 183 231 39 0 chr10 10499657 10499709 -129817056 + L2 LINE L2 2933 2986 -327 194 0 0 37 chr10 10499785 10499812 -129816953 + (CAA)n Simple_repeat Simple_repeat 2 27 0 673 321 44 14 chr10 10499974 10500270 -129816495 - LTR16C LTR ERVL -181 310 6 524 255 39 114 chr10 10500925 10501054 -129815711 + MIR SINE MIR 13 115 -147 2319 119 0 0 chr10 10501054 10501366 -129815399 + AluSx SINE Alu 1 312 0 524 255 39 114 chr10 10501366 10501491 -129815274 + MIR SINE MIR 115 248 -14 193 254 0 48 chr10 10502910 10502973 -129813792 - MIR SINE MIR -31 231 172 30 0 0 0 chr10 10502984 10503014 -129813751 + AT_rich Low_complexity Low_complexity 1 30 0 494 292 91 40 chr10 10503440 10503769 -129812996 + MLT1I LTR MaLR 61 406 -3 21 0 0 0 chr10 10504871 10504892 -129811873 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 10505783 10505804 -129810961 + AT_rich Low_complexity Low_complexity 1 21 0 666 246 78 0 chr10 10505809 10506093 -129810672 + L1M4 LINE L1 3139 3444 -2702 664 174 0 25 chr10 10506095 10506216 -129810549 + AluJb SINE Alu 81 198 -114 2831 255 64 35 chr10 10506226 10507300 -129809465 + L1M4 LINE L1 3468 4573 -1573 1648 235 143 75 chr10 10507286 10508172 -129808593 + L1MC3 LINE L1 4062 5008 -1138 * 1048 251 47 16 chr10 10508231 10508550 -129808215 - LTR52 LTR ERVL -92 329 1 4835 253 58 21 chr10 10508550 10509850 -129806915 - LTR52-int LTR ERVL 0 3556 2210 3544 239 65 19 chr10 10509916 10511168 -129805597 - LTR52-int LTR ERVL -1480 2098 794 198 0 0 0 chr10 10511224 10511246 -129805519 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 2205 216 82 51 chr10 10511249 10511837 -129804928 - LTR52-int LTR ERVL -2940 616 11 1678 204 30 33 chr10 10511859 10512255 -129804510 - LTR52 LTR ERVL -26 395 1 950 229 30 0 chr10 10512255 10512521 -129804244 + L1MC3 LINE L1 5005 5278 -868 1773 214 5 5 chr10 10512550 10512929 -129803836 + L1MC3 LINE L1 5545 5923 -1862 1042 227 57 57 chr10 10512929 10513264 -129803501 + MER2 DNA MER2_type 1 335 -10 4660 181 38 56 chr10 10513282 10514379 -129802386 + L1MC3 LINE L1 5917 6994 -791 3380 5 0 0 chr10 10514429 10514809 -129801956 - L1PA2 LINE L1 0 6155 5776 5243 18 2 0 chr10 10514809 10515841 -129800924 + L1PA2 LINE L1 4772 5804 -351 1288 230 11 53 chr10 10515850 10516207 -129800558 + L1MC3 LINE L1 7139 7480 -305 407 320 19 19 chr10 10516446 10516602 -129800163 - L2 LINE L2 0 3313 3158 195 129 0 0 chr10 10516801 10516832 -129799933 + (CA)n Simple_repeat Simple_repeat 1 31 0 1861 226 34 18 chr10 10516861 10517362 -129799403 - MER90 LTR ERV1 -18 596 88 2139 96 4 4 chr10 10517872 10518198 -129798567 - AluSg1 SINE Alu 0 326 1 2229 107 0 29 chr10 10519168 10519477 -129797288 + AluSg SINE Alu 1 300 -10 195 308 0 77 chr10 10519802 10519880 -129796885 - MIR SINE MIR -121 141 70 5128 176 14 10 chr10 10521448 10523209 -129793556 - L1PA16 LINE L1 -9 6157 4392 324 291 50 14 chr10 10523823 10523964 -129792801 - L1ME1 LINE L1 -80 6086 5941 347 296 48 69 chr10 10524006 10524297 -129792468 - L1MEc LINE L1 -4579 1817 1533 35 0 0 0 chr10 10524328 10524363 -129792402 + AT_rich Low_complexity Low_complexity 1 35 0 865 295 55 25 chr10 10524671 10524974 -129791791 + L1MEc LINE L1 1973 2265 -3950 2178 114 7 0 chr10 10524974 10525271 -129791494 - AluSq SINE Alu -14 299 1 865 295 55 25 chr10 10525271 10525717 -129791048 + L1MEc LINE L1 2265 2717 -3498 250 311 104 43 chr10 10525718 10525882 -129790883 + MLT2E LTR ERVL 1 174 -454 1151 263 73 32 chr10 10526077 10526514 -129790251 + LTR16A1 LTR ERVL 3 457 0 523 336 18 5 chr10 10526838 10527055 -129789710 + ERVL LTR ERVL 316 535 -5229 724 343 58 48 chr10 10527194 10527923 -129788842 + ERVL LTR ERVL 843 1578 -4186 2023 82 19 0 chr10 10528450 10528718 -129788047 - MER4E LTR ERV1 -28 738 466 509 266 10 68 chr10 10528721 10528913 -129787852 + ERVL LTR ERVL 1763 1943 -3711 782 308 5 5 chr10 10528969 10529190 -129787575 + ERVL LTR ERVL 2121 2341 -3423 * 2508 300 73 15 chr10 10529183 10530160 -129786605 + ERVL LTR ERVL 2506 3538 -2226 804 309 42 51 chr10 10530285 10530758 -129786007 - HERV16 LTR ERVL -2207 2789 2321 1495 233 149 10 chr10 10530813 10531221 -129785544 - MLT2B2 LTR ERVL -50 465 1 366 23 0 0 chr10 10532190 10532233 -129784532 + (TTTA)n Simple_repeat Simple_repeat 4 46 0 1963 129 4 0 chr10 10532235 10532513 -129784252 - AluY SINE Alu -32 279 1 522 324 89 37 chr10 10532637 10532986 -129783779 - LTR16B LTR ERVL 0 464 98 2504 112 3 6 chr10 10533024 10533380 -129783385 - THE1A LTR MaLR 0 355 1 333 286 56 48 chr10 10533430 10533661 -129783104 + L1ME LINE L1 5550 5782 -388 1100 243 36 49 chr10 10533661 10533815 -129782950 - MLT1D LTR MaLR 0 505 351 1799 130 0 65 chr10 10533815 10534122 -129782643 - AluSx SINE Alu -14 298 12 1100 243 36 49 chr10 10534122 10534296 -129782469 - MLT1D LTR MaLR -154 351 181 1661 192 0 7 chr10 10534319 10534606 -129782159 + AluJo SINE Alu 7 291 -21 216 0 0 0 chr10 10535195 10535219 -129781546 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2167 125 0 0 chr10 10535310 10535607 -129781158 + AluSx SINE Alu 1 297 -15 856 163 6 67 chr10 10536130 10536308 -129780457 + FRAM SINE Alu 2 168 -8 248 303 91 57 chr10 10536795 10536970 -129779795 + L3b LINE CR1 1205 1385 -198 2142 136 3 0 chr10 10537320 10537630 -129779135 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr10 10537986 10538007 -129778758 + AT_rich Low_complexity Low_complexity 1 21 0 412 338 40 45 chr10 10538796 10538994 -129777771 - MIR SINE MIR -41 221 25 255 204 0 0 chr10 10539203 10539257 -129777508 + (TATG)n Simple_repeat Simple_repeat 4 57 0 453 213 0 0 chr10 10539866 10539946 -129776819 + Tigger5 DNA MER2_type 2237 2316 -7 303 28 0 0 chr10 10541222 10541258 -129775507 + (TG)n Simple_repeat Simple_repeat 1 36 0 210 317 96 0 chr10 10541962 10542066 -129774699 + MIR SINE MIR 148 261 -1 2276 97 0 7 chr10 10543612 10543912 -129772853 - AluSg SINE Alu -12 298 1 245 233 0 0 chr10 10544074 10544117 -129772648 + (TG)n Simple_repeat Simple_repeat 1 43 0 1137 280 59 8 chr10 10544155 10544665 -129772100 + L1M1 LINE L1 2665 3263 -4483 254 279 0 0 chr10 10544690 10544758 -129772007 + Tigger5 DNA MER2_type 2251 2318 -5 316 265 0 0 chr10 10544780 10544848 -129771917 - Tigger5 DNA MER2_type -2235 88 21 889 115 0 0 chr10 10544850 10544980 -129771785 + AluSg/x SINE Alu 181 310 0 474 191 36 0 chr10 10545020 10545104 -129771661 + Tigger5 DNA MER2_type 2237 2323 0 4737 262 40 41 chr10 10545112 10547705 -129769060 + L1MEc LINE L1 1919 4462 -1753 670 264 124 28 chr10 10547826 10548182 -129768583 + L1MEc LINE L1 4423 4812 -1403 1554 301 110 26 chr10 10548189 10548871 -129767894 + L2 LINE L2 1876 2614 -700 231 342 37 25 chr10 10549210 10549371 -129767394 - LTR16C LTR ERVL -3 488 326 237 342 45 0 chr10 10549745 10549856 -129766909 - L1M4 LINE L1 -1293 4853 4738 297 308 97 34 chr10 10550081 10550617 -129766148 - L1M4 LINE L1 -1745 4401 3832 401 79 0 0 chr10 10550793 10550856 -129765909 - L1PB1 LINE L1 0 6151 6089 358 311 61 30 chr10 10550877 10551272 -129765493 - L1MEd LINE L1 -5031 1088 682 543 293 68 24 chr10 10552417 10552666 -129764099 + LTR16B LTR ERVL 116 375 -89 321 368 8 8 chr10 10552954 10553087 -129763678 - MIR SINE MIR -118 144 12 492 260 114 49 chr10 10553971 10554279 -129762486 - MLT1J LTR MaLR -173 338 11 282 356 48 39 chr10 10554293 10554501 -129762264 + L3 LINE CR1 1367 1576 -1 236 293 98 83 chr10 10554554 10554687 -129762078 + L2 LINE L2 3138 3272 0 222 207 0 0 chr10 10555214 10555272 -129761493 + CT-rich Low_complexity Low_complexity 1 58 0 233 182 30 0 chr10 10555272 10555338 -129761427 + (CA)n Simple_repeat Simple_repeat 2 69 0 208 206 0 29 chr10 10555339 10555407 -129761358 + CT-rich Low_complexity Low_complexity 2 67 0 2140 121 0 0 chr10 10555584 10555900 -129760865 + AluSg SINE Alu 1 316 0 323 347 57 0 chr10 10556773 10556897 -129759868 + MIR3 SINE MIR 62 192 -16 2176 121 7 0 chr10 10558376 10558674 -129758091 - AluSx SINE Alu -12 300 1 1812 174 3 25 chr10 10559773 10560121 -129756644 - AluJo SINE Alu 0 341 1 582 334 71 56 chr10 10560663 10561057 -129755708 + L1M4 LINE L1 4281 4667 -1479 1939 137 4 0 chr10 10561057 10561335 -129755430 + AluSx SINE Alu 31 309 -3 582 334 71 56 chr10 10561335 10561870 -129754895 + L1M4 LINE L1 4667 5241 -905 1601 208 7 10 chr10 10562033 10562336 -129754429 + AluJb SINE Alu 1 302 -10 1399 258 136 20 chr10 10562943 10563284 -129753481 + L1M4 LINE L1 3181 3481 -2665 2307 108 0 0 chr10 10563284 10563591 -129753174 + AluSx SINE Alu 1 307 -5 1399 258 136 20 chr10 10563591 10563771 -129752994 + L1M4 LINE L1 3481 3639 -2507 333 47 0 0 chr10 10563771 10563814 -129752951 + (CA)n Simple_repeat Simple_repeat 2 44 0 1399 258 136 20 chr10 10563814 10563990 -129752775 + L1M4 LINE L1 3639 3960 -2186 590 290 37 71 chr10 10564232 10564352 -129752413 - MIR SINE MIR -1 261 139 2031 128 0 14 chr10 10564352 10564674 -129752091 - AluSq SINE Alu 0 318 1 590 290 37 71 chr10 10564674 10564821 -129751944 - MIR SINE MIR -123 139 2 1196 124 0 11 chr10 10565170 10565347 -129751418 - FRAM SINE Alu -3 173 1 23 68 0 0 chr10 10565803 10565847 -129750918 + AT_rich Low_complexity Low_complexity 1 44 0 1272 247 83 20 chr10 10566762 10567159 -129749606 + L1MCa LINE L1 23 444 -5982 444 138 88 0 chr10 10567189 10567269 -129749496 + L1MC2 LINE L1 6247 6333 -11 1894 166 33 28 chr10 10567563 10567925 -129748840 - THE1B LTR MaLR 0 364 1 1584 259 86 49 chr10 10568015 10568828 -129747937 - L1ME3A LINE L1 -11 6970 6128 203 61 30 0 chr10 10569159 10569192 -129747573 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 182 36 0 36 chr10 10569235 10569263 -129747502 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 1108 292 51 47 chr10 10569673 10570133 -129746632 - L1ME3A LINE L1 -864 6093 5627 2395 74 0 3 chr10 10570133 10570432 -129746333 - AluY SINE Alu -13 298 1 1108 292 51 47 chr10 10570432 10570776 -129745989 - L1ME3A LINE L1 -1330 5627 5286 360 152 15 0 chr10 10570830 10570896 -129745869 - LTR41 LTR ERVL -5 768 702 329 253 0 50 chr10 10570902 10571001 -129745764 - L1MC4 LINE L1 -1339 6703 6610 328 262 16 145 chr10 10571011 10571328 -129745437 - LTR41 LTR ERVL -60 713 438 341 245 82 10 chr10 10571652 10571750 -129745015 - LTR41 LTR ERVL -586 187 83 985 276 95 25 chr10 10571780 10572370 -129744395 - L1ME3A LINE L1 -1853 5104 4474 778 288 21 16 chr10 10572550 10572793 -129743972 + LTR16B LTR ERVL 221 464 0 974 268 76 83 chr10 10572841 10573610 -129743155 - L1M4b LINE L1 -2606 4351 3578 2118 134 0 0 chr10 10573610 10573916 -129742849 - AluSg SINE Alu -4 306 1 974 268 76 83 chr10 10573916 10574777 -129741988 - L1M4b LINE L1 -3379 3578 2770 651 24 0 0 chr10 10574941 10575026 -129741739 - L1PA4 LINE L1 -142 6013 5929 398 344 125 14 chr10 10575052 10575407 -129741358 - L1M4b LINE L1 -5050 1910 1419 791 334 53 3 chr10 10575432 10575789 -129740976 + MLT1G1 LTR MaLR 1 419 -176 313 277 10 20 chr10 10575827 10575928 -129740837 + MLT1G1 LTR MaLR 496 595 0 1982 153 122 13 chr10 10576385 10576771 -129739994 + MSTA LTR MaLR 1 428 0 2010 173 20 3 chr10 10576803 10577161 -129739604 + MLT1A1 LTR MaLR 1 364 -1 301 305 74 0 chr10 10577417 10577512 -129739253 - MIR SINE MIR -158 104 3 788 256 19 10 chr10 10580521 10580728 -129736037 - MLT1A1 LTR MaLR 0 365 157 654 120 0 10 chr10 10580742 10580842 -129735923 - AluYb8 SINE Alu -16 302 204 758 117 51 15 chr10 10580848 10580985 -129735780 - MLT1A1 LTR MaLR -215 150 9 184 259 47 71 chr10 10581388 10581473 -129735292 + L2 LINE L2 3189 3271 -1 2047 143 39 22 chr10 10583028 10583386 -129733379 - THE1B LTR MaLR 0 364 1 1500 249 96 42 chr10 10583953 10584504 -129732261 + L1MC4 LINE L1 6460 7040 -1002 1273 282 82 27 chr10 10584528 10584747 -129732018 + L1MC4 LINE L1 7232 7438 -604 443 99 0 121 chr10 10584747 10584784 -129731981 + MADE1 DNA Mariner 1 22 -58 2307 106 0 0 chr10 10584784 10585076 -129731689 - AluSc SINE Alu -14 295 4 443 99 0 121 chr10 10585076 10585129 -129731636 + MADE1 DNA Mariner 22 80 0 1273 282 82 27 chr10 10585129 10585498 -129731267 + L1MC4 LINE L1 7438 7852 -190 24 0 0 0 chr10 10586115 10586139 -129730626 + AT_rich Low_complexity Low_complexity 1 24 0 817 253 39 0 chr10 10586298 10586480 -129730285 - MER5A DNA MER1_type 0 189 1 4134 179 65 23 chr10 10587373 10588147 -129728618 - L1MA7 LINE L1 0 6291 5551 2113 129 7 0 chr10 10588147 10588442 -129728323 - AluSp SINE Alu -16 297 1 4134 179 65 23 chr10 10588442 10589408 -129727357 - L1MA7 LINE L1 -740 5551 4478 1517 207 24 6 chr10 10589439 10589777 -129726988 + L1 LINE L1 3850 4193 -1953 1366 164 105 4 chr10 10589779 10590017 -129726748 + AluJb SINE Alu 2 263 -49 396 0 0 0 chr10 10590045 10590089 -129726676 + (CA)n Simple_repeat Simple_repeat 1 44 0 440 193 11 0 chr10 10590098 10590186 -129726579 + MLT1A2 LTR MaLR 269 357 -17 347 349 155 9 chr10 10590530 10590762 -129726003 - L1MEc LINE L1 -6094 302 37 358 296 26 40 chr10 10591009 10591161 -129725604 - HAL1b LINE L1 -857 491 342 644 111 0 0 chr10 10591937 10592036 -129724729 + AluSg/x SINE Alu 207 305 -7 4001 167 11 10 chr10 10592191 10592524 -129724241 - L1PA16 LINE L1 -9 6157 5826 2296 111 0 13 chr10 10592524 10592840 -129723925 - AluSx SINE Alu 0 312 1 4001 167 11 10 chr10 10592840 10593229 -129723536 - L1PA16 LINE L1 -340 5826 5434 22 0 0 0 chr10 10593275 10593297 -129723468 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr10 10593927 10593959 -129722806 + AT_rich Low_complexity Low_complexity 1 32 0 605 234 9 7 chr10 10594124 10594362 -129722403 - LTR16B LTR ERVL -175 289 1 226 336 88 26 chr10 10594374 10594487 -129722278 - MIR SINE MIR -117 145 26 195 42 0 0 chr10 10594490 10594514 -129722251 + (TAGG)n Simple_repeat Simple_repeat 2 25 0 400 281 102 18 chr10 10595145 10595312 -129721453 - MLT1J2 LTR MaLR -267 183 3 2344 82 7 0 chr10 10595467 10595770 -129720995 - AluSp SINE Alu -8 305 1 328 358 22 7 chr10 10596031 10596168 -129720597 + MIR3 SINE MIR 7 145 -63 990 288 75 7 chr10 10597195 10597584 -129719181 - MLT1J1 LTR MaLR 0 446 38 330 351 53 11 chr10 10597674 10597862 -129718903 - MIR SINE MIR -66 196 1 195 324 68 0 chr10 10598651 10598725 -129718040 + MIR SINE MIR 65 143 -65 264 289 87 19 chr10 10598839 10598943 -129717822 - MIR SINE MIR -65 143 33 204 83 62 0 chr10 10599394 10599442 -129717323 + (TA)n Simple_repeat Simple_repeat 2 52 0 1709 208 32 5 chr10 10600014 10600394 -129716371 + MLT1B LTR MaLR 1 390 0 570 326 16 40 chr10 10601259 10601442 -129715323 + MLT1I LTR MaLR 75 250 -159 1580 211 18 101 chr10 10601442 10601988 -129714777 - MLT1D LTR MaLR -4 501 1 570 326 16 40 chr10 10601988 10602108 -129714657 + MLT1I LTR MaLR 250 371 -38 253 333 44 11 chr10 10602278 10602461 -129714304 - L1ME LINE L1 -409 5712 5524 2103 135 0 0 chr10 10604312 10604609 -129712156 + AluSc SINE Alu 1 297 -12 1672 186 0 11 chr10 10605691 10605971 -129710794 + AluJb SINE Alu 5 281 -31 2147 113 7 13 chr10 10606864 10607145 -129709620 + AluSg SINE Alu 1 282 -28 240 35 0 0 chr10 10607145 10607174 -129709591 + (TC)n Simple_repeat Simple_repeat 1 29 0 198 0 0 0 chr10 10607173 10607195 -129709570 + (CA)n Simple_repeat Simple_repeat 1 22 0 * 2147 113 7 13 chr10 10607174 10607215 -129709550 + AluSg SINE Alu 282 300 -10 24 0 0 0 chr10 10607512 10607536 -129709229 + AT_rich Low_complexity Low_complexity 1 24 0 982 289 88 13 chr10 10607553 10608009 -129708756 - LTR33 LTR ERVL -9 512 23 185 346 74 19 chr10 10609354 10609516 -129707249 - L2 LINE L2 -10 3303 3133 565 278 40 28 chr10 10611995 10612171 -129704594 + MER45A DNA AcHobo 1 178 0 486 294 81 57 chr10 10613404 10613652 -129703113 - MIR SINE MIR 0 262 9 461 356 76 20 chr10 10613732 10614035 -129702730 + MLT1I LTR MaLR 73 392 -17 329 353 112 0 chr10 10614233 10614349 -129702416 + MIR SINE MIR 17 145 -63 2027 240 42 13 chr10 10614406 10615105 -129701660 + L1MC3 LINE L1 4578 5296 -850 * 2385 220 37 22 chr10 10615103 10615786 -129700979 + L1MB2 LINE L1 4133 4825 -1321 866 197 0 0 chr10 10615786 10615933 -129700832 + AluSg/x SINE Alu 159 305 -7 742 206 18 6 chr10 10615935 10616105 -129700660 + L1MB2 LINE L1 4819 4990 -1156 326 263 8 17 chr10 10616115 10616233 -129700532 - L1MA9 LINE L1 -157 6155 6039 3832 176 37 53 chr10 10616285 10617489 -129699276 + L1MB2 LINE L1 4980 6171 0 * 5783 195 42 61 chr10 10617485 10618082 -129698683 + L1MC3 LINE L1 5283 5890 -1895 2427 72 0 3 chr10 10618082 10618386 -129698379 - AluY SINE Alu -8 303 1 5783 195 42 61 chr10 10618386 10619463 -129697302 + L1MC3 LINE L1 5890 6925 -860 326 220 11 22 chr10 10619476 10619529 -129697236 + L1MC4a LINE L1 6779 6832 -976 315 104 0 0 chr10 10619529 10619577 -129697188 + (CA)n Simple_repeat Simple_repeat 1 48 0 326 220 11 22 chr10 10619577 10619614 -129697151 + L1MC4a LINE L1 6832 6868 -940 900 236 81 3 chr10 10619824 10619951 -129696814 + MER33 DNA MER1_type 1 117 -2468 2113 142 3 3 chr10 10619951 10620260 -129696505 + AluSq SINE Alu 1 309 -4 900 236 81 3 chr10 10620260 10620429 -129696336 + MER33 DNA MER1_type 117 320 -4 2667 178 26 72 chr10 10620744 10621385 -129695380 - LTR9 LTR ERV1 0 612 1 254 276 42 11 chr10 10621676 10621815 -129694950 + MLT1J LTR MaLR 446 511 0 222 349 54 49 chr10 10622392 10622694 -129694071 - L2 LINE L2 -14 3258 2894 1960 171 20 15 chr10 10623070 10623479 -129693286 - L1MC1 LINE L1 -1 6332 5922 234 284 42 30 chr10 10623558 10623734 -129693031 - MLT1J1 LTR MaLR -10 436 263 309 51 0 0 chr10 10624077 10624116 -129692649 + (TG)n Simple_repeat Simple_repeat 2 40 0 1845 145 0 4 chr10 10624116 10624378 -129692387 - AluSx SINE Alu -28 284 24 229 272 49 37 chr10 10624381 10624462 -129692303 - L2 LINE L2 0 3272 3191 22 0 0 0 chr10 10625942 10625964 -129690801 + AT_rich Low_complexity Low_complexity 1 22 0 467 315 59 33 chr10 10626140 10626530 -129690235 + L1M4 LINE L1 2304 2703 -3443 734 199 126 16 chr10 10626804 10626995 -129689770 + MLT1A2 LTR MaLR 1 212 -162 1000 140 0 7 chr10 10627114 10627257 -129689508 - AluJb SINE Alu -170 142 1 26 0 0 0 chr10 10627262 10627288 -129689477 + AT_rich Low_complexity Low_complexity 1 26 0 714 118 17 42 chr10 10628364 10628483 -129688282 + AluJb SINE Alu 34 149 -163 3854 179 78 31 chr10 10628535 10629321 -129687444 + L1MCa LINE L1 20 768 -5658 1488 161 158 60 chr10 10629321 10629707 -129687058 - MSTB LTR MaLR -2 424 1 3854 179 78 31 chr10 10629707 10629836 -129686929 + L1MCa LINE L1 768 982 -5444 3949 94 11 4 chr10 10629836 10630386 -129686379 - MER41A LTR ERV1 0 554 1 3854 179 78 31 chr10 10630386 10630408 -129686357 + L1MCa LINE L1 982 1002 -5424 336 48 0 0 chr10 10631337 10631379 -129685386 + (TG)n Simple_repeat Simple_repeat 2 43 0 253 239 145 22 chr10 10631950 10632088 -129684677 + MER104 DNA Tc2 22 176 -4 29 0 0 25 chr10 10632963 10632975 -129683790 + AT_rich Low_complexity Low_complexity 1 12 -27 1828 47 0 4 chr10 10632975 10633209 -129683556 + L1PA4 LINE L1 5920 6152 -3 29 0 0 25 chr10 10633209 10633236 -129683529 + AT_rich Low_complexity Low_complexity 12 39 0 1629 110 9 0 chr10 10633379 10633598 -129683167 - AluSx SINE Alu -91 221 1 1845 147 20 124 chr10 10634335 10634659 -129682106 - MER7C DNA MER2_type -2607 421 154 3166 151 47 0 chr10 10634659 10635216 -129681549 - L1PB3 LINE L1 -6 6148 5566 1845 147 20 124 chr10 10635216 10635333 -129681432 - MER7C DNA MER2_type -2874 154 26 2380 77 3 0 chr10 10635783 10636112 -129680653 + AluY SINE Alu 10 311 0 1655 177 108 0 chr10 10636433 10636777 -129679988 + MSTA LTR MaLR 2 382 -46 1025 214 5 0 chr10 10636830 10637036 -129679729 + Tigger3(Golem) DNA MER2_type 46 252 -2777 230 135 0 0 chr10 10637062 10637099 -129679666 + MSTA LTR MaLR 390 426 -2 26 30 0 0 chr10 10637462 10637495 -129679270 + AT_rich Low_complexity Low_complexity 1 33 0 297 263 91 0 chr10 10639151 10639250 -129677515 + MER20B DNA MER1_type 63 170 -613 22 0 0 0 chr10 10639377 10639399 -129677366 + AT_rich Low_complexity Low_complexity 1 22 0 4705 62 6 4 chr10 10639422 10640112 -129676653 + L1PA7 LINE L1 5213 5904 -250 950 130 56 0 chr10 10640112 10640273 -129676492 - LTR12 LTR ERV1 0 714 545 7331 114 18 22 chr10 10640286 10642371 -129674394 - HERV9 LTR ERV1 -6180 2219 59 732 122 47 74 chr10 10642350 10642498 -129674267 - pTR5 LTR ERV1 -1994 444 301 * 321 263 10 0 chr10 10642498 10642597 -129674168 - LTR30 LTR ERV1 -79 643 544 1370 103 205 6 chr10 10642597 10642966 -129673799 - LTR12 LTR ERV1 -417 2021 57 247 196 0 0 chr10 10642966 10643017 -129673748 - LTR30 LTR ERV1 -670 52 2 1754 106 0 4 chr10 10643018 10643272 -129673493 + L1PA7 LINE L1 5901 6153 -1 440 206 7 0 chr10 10645239 10645375 -129671390 + (TG)n Simple_repeat Simple_repeat 2 138 0 535 196 12 0 chr10 10645397 10645570 -129671195 + (TG)n Simple_repeat Simple_repeat 2 176 0 481 187 47 33 chr10 10645744 10645894 -129670871 + L1MC3 LINE L1 6987 7138 -647 300 73 0 0 chr10 10645895 10645936 -129670829 - 5S rRNA rRNA -79 42 2 237 122 0 0 chr10 10645951 10645992 -129670773 - 5S rRNA rRNA -79 42 2 2657 188 18 4 chr10 10645994 10646538 -129670227 + L1MC3 LINE L1 7127 7678 -107 1584 139 157 80 chr10 10646539 10646914 -129669851 - MER4A LTR ERV1 0 664 261 517 109 33 11 chr10 10646914 10647006 -129669759 - MER4A LTR ERV1 -566 98 5 402 202 0 0 chr10 10647011 10647095 -129669670 + L1MC3 LINE L1 7676 7759 -26 282 337 107 16 chr10 10648225 10648412 -129668353 + MIR SINE MIR 32 235 -27 28 29 0 0 chr10 10648711 10648746 -129668019 + AT_rich Low_complexity Low_complexity 1 35 0 424 256 71 59 chr10 10649009 10649247 -129667518 - Charlie2a DNA MER1_type -1895 967 727 474 358 42 26 chr10 10649545 10649931 -129666834 - ERVL LTR ERVL -3556 2208 1817 482 339 36 39 chr10 10649932 10650345 -129666420 - ERVL LTR ERVL -4348 1416 1005 24 32 0 0 chr10 10652481 10652512 -129664253 + AT_rich Low_complexity Low_complexity 1 31 0 460 283 28 90 chr10 10653098 10653275 -129663490 - MIR SINE MIR -38 224 59 310 332 126 5 chr10 10653480 10653670 -129663095 - MIR SINE MIR -49 213 1 1365 229 8 24 chr10 10654289 10654661 -129662104 - MLT1A2 LTR MaLR 0 374 9 234 286 29 0 chr10 10654661 10654766 -129661999 + (TA)n Simple_repeat Simple_repeat 2 109 0 1744 132 70 59 chr10 10655828 10655895 -129660870 - THE1C LTR MaLR 0 375 310 2020 133 0 0 chr10 10655895 10656212 -129660553 - AluSc SINE Alu 0 317 1 1744 132 70 59 chr10 10656212 10656514 -129660251 - THE1C LTR MaLR -65 310 1 282 293 50 45 chr10 10657064 10657423 -129659342 + L1MEd LINE L1 893 1253 -4866 180 0 0 0 chr10 10657459 10657479 -129659286 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 310 208 0 0 chr10 10657488 10657560 -129659205 - FLAM SINE Alu -22 111 40 377 312 50 47 chr10 10657822 10658507 -129658258 - L1M4 LINE L1 -2373 3773 3087 854 243 83 71 chr10 10660921 10661026 -129655739 + ERVL LTR ERVL 4117 4219 -1545 2320 98 0 20 chr10 10661026 10661331 -129655434 + AluSq SINE Alu 1 299 -14 854 243 83 71 chr10 10661331 10661632 -129655133 + ERVL LTR ERVL 4219 4528 -1236 382 241 103 0 chr10 10661636 10661752 -129655013 - MLT1H1 LTR MaLR -11 544 417 868 360 115 26 chr10 10662139 10663044 -129653721 - L2 LINE L2 -337 2977 1993 1178 259 123 7 chr10 10663165 10663579 -129653186 - LTR40b LTR ERVL 0 462 1 220 179 0 0 chr10 10663932 10663971 -129652794 + MIR SINE MIR 12 50 -212 265 271 66 8 chr10 10664243 10664365 -129652400 + L1M3 LINE L1 5434 5562 -618 226 241 86 9 chr10 10666392 10666508 -129650257 + LTR16C LTR ERVL 367 491 0 22 70 0 0 chr10 10666536 10666579 -129650186 + AT_rich Low_complexity Low_complexity 1 43 0 180 262 0 0 chr10 10668256 10668298 -129648467 + L2 LINE L2 3241 3282 -31 23 0 0 0 chr10 10668575 10668598 -129648167 + AT_rich Low_complexity Low_complexity 1 23 0 1706 169 27 32 chr10 10669308 10669680 -129647085 - L1MA3 LINE L1 -10 6295 5926 368 340 0 35 chr10 10669786 10669930 -129646835 - MIR SINE MIR -121 141 3 317 102 0 0 chr10 10669955 10670004 -129646761 - MLT2B1 LTR ERVL 0 520 472 180 146 67 0 chr10 10670013 10670102 -129646663 + (TA)n Simple_repeat Simple_repeat 2 96 0 403 276 8 16 chr10 10670124 10670251 -129646514 - MLT2B1 LTR ERVL -52 468 343 2566 186 19 25 chr10 10670334 10670515 -129646250 + MER41E LTR ERV1 1 182 -330 2830 99 0 3 chr10 10670515 10670890 -129645875 + THE1C LTR MaLR 1 374 -1 2566 186 19 25 chr10 10670890 10671223 -129645542 + MER41E LTR ERV1 182 512 0 1179 198 3 73 chr10 10671226 10671540 -129645225 - MLT2B1 LTR ERVL -228 292 1 2082 133 10 3 chr10 10671799 10672100 -129644665 + AluSc SINE Alu 1 303 -6 549 333 15 5 chr10 10672351 10672552 -129644213 + MIR SINE MIR 3 205 -57 213 39 0 0 chr10 10672951 10672977 -129643788 + (A)n Simple_repeat Simple_repeat 1 26 0 952 204 48 109 chr10 10674330 10674707 -129642058 - LTR26B LTR ERV1 -177 354 1 21 36 0 0 chr10 10675998 10676026 -129640739 + AT_rich Low_complexity Low_complexity 1 28 0 190 268 12 85 chr10 10676237 10676319 -129640446 + MIR SINE MIR 110 185 -77 466 321 160 5 chr10 10677077 10677289 -129639476 - MIR SINE MIR -16 246 2 1902 143 7 0 chr10 10677400 10677680 -129639085 + AluSx SINE Alu 31 312 0 311 318 195 36 chr10 10678430 10678877 -129637888 - L3 LINE CR1 -422 1155 638 427 314 117 24 chr10 10678950 10679240 -129637525 - L1MEc LINE L1 -4131 2265 1949 23 0 0 0 chr10 10679310 10679333 -129637432 + AT_rich Low_complexity Low_complexity 1 23 0 420 312 49 56 chr10 10679750 10680141 -129636624 - L1MEc LINE L1 -5591 614 227 182 37 37 0 chr10 10681180 10681207 -129635558 + (TA)n Simple_repeat Simple_repeat 1 28 0 227 169 0 34 chr10 10681217 10681276 -129635489 - L1MC4 LINE L1 -1338 6704 6648 330 243 118 66 chr10 10681788 10681940 -129634825 + MIR SINE MIR 30 189 -73 368 308 122 52 chr10 10682531 10682703 -129634062 - MIR SINE MIR -49 213 30 1836 131 0 0 chr10 10683862 10684114 -129632651 + AluSg SINE Alu 43 294 -16 1391 182 11 12 chr10 10685104 10685659 -129631106 + MER6A DNA MER2_type 1 604 -1 189 0 0 0 chr10 10686972 10686993 -129629772 + (A)n Simple_repeat Simple_repeat 1 21 0 282 259 26 129 chr10 10739446 10739562 -129577203 + MER5A DNA MER1_type 10 113 -76 208 240 21 94 chr10 10740109 10740205 -129576560 + MIR SINE MIR 104 192 -70 1795 159 0 7 chr10 10741571 10741888 -129574877 - AluSx SINE Alu 0 315 1 2234 109 0 0 chr10 10742514 10742818 -129573947 - AluSq SINE Alu -9 304 1 1945 52 4 0 chr10 10742940 10743220 -129573545 - AluY SINE Alu 0 333 53 577 120 0 0 chr10 10744219 10744294 -129572471 + AluSg/x SINE Alu 217 291 -21 231 254 18 0 chr10 10744397 10744452 -129572313 + (TAGA)n Simple_repeat Simple_repeat 3 58 0 * 1564 176 42 11 chr10 10744424 10744792 -129571973 - MLT2C2 LTR ERVL -20 444 5 488 357 22 32 chr10 10744898 10745301 -129571464 - ERVL LTR ERVL -3842 1922 1524 857 196 6 11 chr10 10746202 10746381 -129570384 + MER5B DNA MER1_type 1 178 0 681 224 86 11 chr10 10746389 10746563 -129570202 - MER5A DNA MER1_type -1 188 2 2068 147 33 25 chr10 10747162 10747523 -129569242 - THE1B LTR MaLR 0 364 1 354 45 0 0 chr10 10747665 10747709 -129569056 + (TTGG)n Simple_repeat Simple_repeat 2 45 0 1601 252 73 8 chr10 10747941 10748421 -129568344 + LTR40a LTR ERVL 1 511 -8 357 344 18 27 chr10 10748424 10748645 -129568120 + L1MC4a LINE L1 5664 5882 -1926 736 288 63 34 chr10 10748868 10749250 -129567515 + MLT1J LTR MaLR 75 467 -44 662 284 62 27 chr10 10750285 10750623 -129566142 + MLT1C LTR MaLR 118 467 0 268 254 84 0 chr10 10750623 10750694 -129566071 - MIR SINE MIR -81 181 105 242 329 0 0 chr10 10751690 10751769 -129564996 - MIR SINE MIR -10 252 174 817 246 83 49 chr10 10751779 10752226 -129564539 + MLT1C LTR MaLR 6 467 0 533 268 37 37 chr10 10752226 10752390 -129564375 - MIR SINE MIR -92 170 7 1125 211 132 6 chr10 10753143 10753442 -129563323 + MER63B DNA MER1_type 1 261 -801 5057 91 21 101 chr10 10753442 10753843 -129562922 - L1MA2 LINE L1 0 6304 5872 2132 141 0 0 chr10 10753843 10754142 -129562623 - AluSx SINE Alu -13 299 1 5057 91 21 101 chr10 10754142 10754668 -129562097 - L1MA2 LINE L1 -432 5872 5454 2127 126 19 10 chr10 10754668 10754978 -129561787 - AluSq SINE Alu 0 313 1 5057 91 21 101 chr10 10754978 10755006 -129561759 - L1MA2 LINE L1 -850 5454 5425 1125 211 132 6 chr10 10755006 10755048 -129561717 + MER63B DNA MER1_type 261 385 -51 303 125 0 150 chr10 10755675 10755719 -129561046 - MER73 LTR ERVL 0 644 616 2372 82 0 3 chr10 10755719 10756023 -129560742 - AluSx SINE Alu -9 303 1 303 125 0 150 chr10 10756023 10756058 -129560707 - MER73 LTR ERVL -28 616 577 1432 205 121 3 chr10 10756158 10756548 -129560217 - MER73 LTR ERVL -208 436 1 214 361 89 24 chr10 10756881 10757050 -129559715 - L2 LINE L2 -4 3268 3089 2161 125 3 0 chr10 10757168 10757471 -129559294 - AluSp SINE Alu -9 304 1 288 299 60 54 chr10 10757475 10757642 -129559123 - L2 LINE L2 -597 2717 2550 370 275 81 23 chr10 10757928 10758127 -129558638 + LTR16B LTR ERVL 266 450 0 453 217 70 26 chr10 10758679 10758794 -129557971 + MIR SINE MIR 106 225 -37 399 216 0 0 chr10 10758863 10758974 -129557791 + GA-rich Low_complexity Low_complexity 1 111 0 2460 190 91 12 chr10 10759278 10759841 -129556924 + MER21B LTR ERV1 1 607 -256 1397 210 7 3 chr10 10759954 10760244 -129556521 + MER21B LTR ERV1 572 862 -1 3946 32 2 0 chr10 10760249 10760722 -129556043 + L1PA4 LINE L1 5681 6154 -1 1142 89 0 0 chr10 10760790 10760936 -129555829 - AluSg/x SINE Alu -6 306 161 287 278 62 10 chr10 10762004 10762101 -129554664 - L3 LINE CR1 -94 1483 1382 789 216 13 0 chr10 10762202 10762355 -129554410 + FRAM SINE Alu 1 155 -11 206 62 31 0 chr10 10764143 10764175 -129552590 + (GA)n Simple_repeat Simple_repeat 2 34 0 1535 209 31 14 chr10 10764893 10765252 -129551513 + MLT1A1 LTR MaLR 1 365 0 21 0 0 0 chr10 10765741 10765762 -129551003 + AT_rich Low_complexity Low_complexity 1 21 0 2200 129 3 0 chr10 10765810 10766113 -129550652 - AluSx SINE Alu -8 304 1 329 307 33 36 chr10 10766369 10766672 -129550093 + L1ME LINE L1 5484 5785 -336 32 67 0 0 chr10 10766697 10766757 -129550008 + AT_rich Low_complexity Low_complexity 1 60 0 908 177 135 30 chr10 10767351 10767617 -129549148 + MER58B DNA MER1_type 46 339 -2 1785 168 93 72 chr10 10767771 10768188 -129548577 - MSTB LTR MaLR 0 426 1 720 308 14 0 chr10 10768203 10768411 -129548354 + MIR SINE MIR 52 262 0 2090 96 3 48 chr10 10768871 10769209 -129547556 + AluSg SINE Alu 1 325 0 229 270 34 0 chr10 10769635 10769724 -129547041 + L2 LINE L2 3004 3095 -177 5141 143 19 11 chr10 10769884 10770815 -129545950 + L1MA5 LINE L1 5357 6295 -5 22 35 0 0 chr10 10770881 10770910 -129545855 + AT_rich Low_complexity Low_complexity 1 29 0 270 0 0 0 chr10 10770939 10770969 -129545796 + (TG)n Simple_repeat Simple_repeat 1 60 0 270 0 0 0 chr10 10770969 10770999 -129545766 + (TG)n Simple_repeat Simple_repeat 2 31 0 928 259 169 25 chr10 10771100 10771875 -129544890 + L1ME1 LINE L1 3814 4700 -1446 2754 222 42 47 chr10 10771875 10772773 -129543992 + L1ME1 LINE L1 5254 6147 -19 204 200 21 42 chr10 10775324 10775419 -129541346 + T-rich Low_complexity Low_complexity 3 95 0 738 352 25 22 chr10 10775616 10776212 -129540553 - ERVL LTR ERVL -423 5341 4744 322 284 133 34 chr10 10776582 10776846 -129539919 - ERVL LTR ERVL -1442 4212 3923 352 346 19 0 chr10 10777121 10777283 -129539482 - ERVL LTR ERVL -1950 3535 3371 746 22 0 0 chr10 10777394 10777485 -129539280 + L1PA2 LINE L1 6064 6154 -1 224 30 30 0 chr10 10777778 10777811 -129538954 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr10 10777993 10778014 -129538751 + AT_rich Low_complexity Low_complexity 1 21 0 880 264 74 89 chr10 10778066 10778581 -129538184 + L2 LINE L2 1419 1925 -1389 243 293 24 0 chr10 10778814 10778896 -129537869 + L2 LINE L2 1616 1699 -1615 294 294 73 37 chr10 10778984 10779202 -129537563 + LTR16A LTR ERVL 72 297 -153 586 299 98 17 chr10 10779302 10779771 -129536994 + L1M4 LINE L1 3652 4158 -1988 752 158 0 17 chr10 10779811 10779931 -129536834 + FLAM_C SINE Alu 2 119 -14 1226 300 93 24 chr10 10780125 10780661 -129536104 + L1M4 LINE L1 4263 4761 -1385 342 67 0 0 chr10 10780661 10780706 -129536059 + (CA)n Simple_repeat Simple_repeat 2 46 0 1226 300 93 24 chr10 10780706 10781059 -129535706 + L1M4 LINE L1 4761 5237 -909 2373 230 66 13 chr10 10781059 10781677 -129535088 - MER82 DNA MER2_type 0 653 3 1226 300 93 24 chr10 10781677 10781832 -129534933 + L1M4 LINE L1 5237 5380 -766 2351 130 8 6 chr10 10782670 10783032 -129533733 + THE1B LTR MaLR 1 363 -1 273 234 96 32 chr10 10785095 10785189 -129531576 + L2 LINE L2 3209 3308 -5 1973 158 68 23 chr10 10785817 10786246 -129530519 - L1MA8 LINE L1 -18 6273 5826 1747 170 0 25 chr10 10786254 10786531 -129530234 + AluJb SINE Alu 9 278 -34 435 119 0 0 chr10 10786531 10786590 -129530175 + Alu SINE Alu 235 293 -19 2014 62 0 0 chr10 10786621 10786861 -129529904 - AluY SINE Alu -30 281 42 2277 155 69 12 chr10 10786891 10787624 -129529141 - L1MA8 LINE L1 -492 5808 5033 1212 171 9 22 chr10 10788852 10789080 -129527685 + AluJo SINE Alu 68 292 -20 1708 169 52 86 chr10 10789713 10789946 -129526819 - MSTA LTR MaLR 0 428 216 1875 110 0 0 chr10 10789946 10790200 -129526565 - AluSx SINE Alu -19 293 40 1708 169 52 86 chr10 10790200 10790409 -129526356 - MSTA LTR MaLR -212 216 1 23 0 0 0 chr10 10790917 10790940 -129525825 + AT_rich Low_complexity Low_complexity 1 23 0 205 398 10 10 chr10 10791852 10791950 -129524815 - MIR3 SINE MIR -54 154 57 263 343 128 42 chr10 10792078 10792197 -129524568 - L2 LINE L2 -644 2670 2563 737 206 103 49 chr10 10792197 10792420 -129524345 - MER46A DNA MER2_type -1 235 1 263 343 128 42 chr10 10792420 10792612 -129524153 - L2 LINE L2 -751 2563 2332 2226 119 3 3 chr10 10793848 10794150 -129522615 - AluSc SINE Alu -7 302 1 2424 106 0 14 chr10 10794844 10795211 -129521554 - L1PB1 LINE L1 -1 6150 5789 1536 142 15 11 chr10 10795210 10795484 -129521281 - L1PB1 LINE L1 -604 5547 5273 869 254 4 48 chr10 10795591 10795819 -129520946 - MER58A DNA MER1_type -6 218 1 1610 258 39 33 chr10 10795938 10796453 -129520312 - LTR40a LTR ERVL 0 519 2 1370 192 51 7 chr10 10797563 10797839 -129518926 + AluJo SINE Alu 8 295 -17 384 216 88 0 chr10 10797881 10797983 -129518782 - L1MA4A LINE L1 -6 6297 6187 4223 155 47 4 chr10 10800440 10801183 -129515582 + L1PA15 LINE L1 5391 6165 0 2466 75 13 0 chr10 10801451 10801757 -129515008 - AluY SINE Alu -1 310 1 24 0 0 0 chr10 10801806 10801830 -129514935 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 10802093 10802115 -129514650 + AT_rich Low_complexity Low_complexity 1 22 0 264 309 87 0 chr10 10803128 10803254 -129513511 - MIR SINE MIR -74 188 52 238 301 27 0 chr10 10805354 10805447 -129511318 - MIR3 SINE MIR -24 184 87 2283 51 3 0 chr10 10805983 10806277 -129510488 + L1PA5 LINE L1 5860 6154 0 429 289 134 34 chr10 10806302 10806541 -129510224 + MLT1J2 LTR MaLR 188 450 0 1587 209 112 5 chr10 10808513 10808949 -129507816 + L1MA9 LINE L1 5792 6274 -38 419 223 43 17 chr10 10808989 10809106 -129507659 + AluJ/FLAM SINE Alu 2 101 -201 279 275 21 49 chr10 10809629 10809771 -129506994 - L1MC4a LINE L1 -1853 5955 5818 555 284 33 0 chr10 10809853 10810036 -129506729 - L1ME3A LINE L1 -61 6109 5921 2519 60 0 0 chr10 10810038 10810338 -129506427 + AluY SINE Alu 1 300 -11 262 215 0 31 chr10 10810393 10810458 -129506307 - MLT1I LTR MaLR -16 574 512 432 272 40 25 chr10 10810606 10810924 -129505841 - MLT1I LTR MaLR -43 366 6 948 330 81 34 chr10 10811134 10811753 -129505012 + ERVL LTR ERVL 2618 3265 -2389 358 397 22 24 chr10 10811825 10812361 -129504404 + ERVL LTR ERVL 3422 3956 -1808 585 362 60 29 chr10 10812410 10812905 -129503860 + ERVL LTR ERVL 4011 4562 -984 578 267 122 30 chr10 10812917 10813392 -129503373 - L1M4 LINE L1 -1305 4841 4323 2033 47 0 4 chr10 10813402 10813660 -129503105 + L1PA4 LINE L1 5897 6153 -2 253 316 116 11 chr10 10813749 10814024 -129502741 - L1M4 LINE L1 -2499 3647 3344 219 69 0 0 chr10 10814085 10814114 -129502651 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2157 104 3 0 chr10 10814117 10814405 -129502360 - AluSp SINE Alu -24 289 1 388 321 56 20 chr10 10815406 10815655 -129501110 - L1M4 LINE L1 -3642 2504 2247 343 304 171 6 chr10 10815807 10815988 -129500777 + MIR SINE MIR 3 213 -49 30 45 0 0 chr10 10816052 10816096 -129500669 + AT_rich Low_complexity Low_complexity 1 44 0 1141 263 116 28 chr10 10816515 10817024 -129499741 - L1ME2 LINE L1 -24 6209 5656 373 281 137 47 chr10 10817006 10817451 -129499314 - L1ME2 LINE L1 -2420 3795 3311 * 1283 248 44 33 chr10 10817442 10817940 -129498825 - L1ME2 LINE L1 -3375 2840 2349 3150 178 38 31 chr10 10817940 10818031 -129498734 - L1MA4 LINE L1 -3 6297 6208 2300 92 3 0 chr10 10818031 10818326 -129498439 - AluY SINE Alu -15 296 1 3150 178 38 31 chr10 10818326 10818870 -129497895 - L1MA4 LINE L1 -92 6208 5654 216 97 0 0 chr10 10818870 10818901 -129497864 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 3150 178 38 31 chr10 10818901 10818978 -129497787 - L1MA4 LINE L1 -646 5654 5579 1283 248 44 33 chr10 10818978 10819166 -129497599 - L1ME2 LINE L1 -3866 2349 2146 497 294 60 18 chr10 10819585 10819867 -129496898 - L1ME2 LINE L1 -5997 399 106 325 317 139 22 chr10 10820247 10820651 -129496114 - L1M4 LINE L1 -1667 4479 4029 191 291 156 81 chr10 10820807 10821102 -129495663 + L2 LINE L2 2915 3231 -41 248 0 31 0 chr10 10821195 10821227 -129495538 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2334 87 0 0 chr10 10821229 10821518 -129495247 - AluSq SINE Alu -24 289 1 282 391 16 0 chr10 10822040 10822168 -129494597 + L2 LINE L2 2658 2787 -527 1032 73 0 0 chr10 10822342 10822465 -129494300 - AluSg SINE Alu -187 123 1 1092 194 83 24 chr10 10825916 10826168 -129490597 + AluJo SINE Alu 22 288 -24 213 65 0 0 chr10 10828475 10828506 -129488259 + (T)n Simple_repeat Simple_repeat 1 31 0 300 120 0 0 chr10 10828606 10828656 -129488109 + (T)n Simple_repeat Simple_repeat 1 50 0 198 406 31 8 chr10 10831204 10831332 -129485433 - L2 LINE L2 -4 3268 3138 2738 246 62 45 chr10 10832096 10833823 -129482942 - L1ME1 LINE L1 -41 6059 4300 7544 139 36 5 chr10 10833823 10835086 -129481679 - HSMAR2 DNA Mariner 0 1302 1 2738 246 62 45 chr10 10835086 10835518 -129481247 - L1ME1 LINE L1 -1800 4300 3877 1072 311 33 16 chr10 10835543 10835931 -129480834 - L1ME1 LINE L1 -2383 3697 3298 1339 142 0 45 chr10 10835931 10836177 -129480588 + MER46A DNA MER2_type 1 235 -1 1072 311 33 16 chr10 10836177 10836276 -129480489 - L1ME1 LINE L1 -2782 3298 3202 1436 246 116 69 chr10 10836301 10836867 -129479898 - MLT1E2 LTR MaLR -2 622 4 859 268 102 9 chr10 10836873 10837288 -129479477 - L1ME1 LINE L1 -3076 3004 2492 216 0 0 0 chr10 10837288 10837312 -129479453 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 859 268 102 9 chr10 10837312 10837520 -129479245 - L1ME1 LINE L1 -3588 2492 2305 374 249 190 32 chr10 10837525 10837746 -129479019 - L1ME1 LINE L1 -4341 1920 1665 1048 280 77 45 chr10 10837791 10838971 -129477794 - L1ME1 LINE L1 -4565 1515 311 1764 211 51 16 chr10 10839048 10839499 -129477266 + MLT1C LTR MaLR 1 467 0 207 358 9 46 chr10 10839748 10839857 -129476908 - MIR SINE MIR -81 127 23 348 302 47 23 chr10 10840021 10840150 -129476615 - L2 LINE L2 -238 3075 2944 950 153 12 24 chr10 10840167 10840337 -129476428 + BC200 scRNA scRNA 1 168 -32 686 208 159 23 chr10 10840408 10840659 -129476106 - MER58B DNA MER1_type 0 341 50 425 343 117 8 chr10 10840711 10840959 -129475806 - L2 LINE L2 -545 2769 2495 427 269 17 47 chr10 10843651 10843833 -129472932 + MER58C DNA MER1_type 38 212 -3 2247 114 0 0 chr10 10845177 10845475 -129471290 - AluSg SINE Alu -12 298 1 409 353 131 5 chr10 10845644 10845865 -129470900 + MIR SINE MIR 14 262 0 268 111 0 0 chr10 10845976 10846012 -129470753 + U2 snRNA snRNA 1 36 -152 198 376 24 0 chr10 10846537 10846622 -129470143 + MER5B DNA MER1_type 92 178 0 1065 118 0 33 chr10 10846932 10847085 -129469680 + AluSq SINE Alu 144 291 -22 232 318 255 21 chr10 10847125 10847411 -129469354 + L2 LINE L2 2961 3313 0 328 264 35 28 chr10 10848440 10848584 -129468181 + MER103 DNA DNA 7 151 -15 1813 209 36 52 chr10 10848616 10849118 -129467647 + MER74A LTR ERVL 1 494 -64 312 273 149 46 chr10 10849238 10849432 -129467333 + MIR SINE MIR 20 233 -29 614 149 0 40 chr10 10849875 10850050 -129466715 + (TC)n Simple_repeat Simple_repeat 1 168 0 2057 120 0 0 chr10 10850193 10850467 -129466298 - AluSx SINE Alu -38 274 1 1101 162 29 54 chr10 10852349 10852590 -129464175 - MER46A DNA MER2_type 0 236 2 389 344 58 11 chr10 10854140 10854329 -129462436 + MIR SINE MIR 36 233 -29 276 248 218 0 chr10 10854376 10854477 -129462288 - MIR SINE MIR -50 212 90 1081 38 0 0 chr10 10858180 10858311 -129458454 + L1PA5 LINE L1 6013 6143 -11 3044 152 42 17 chr10 10858344 10858572 -129458193 + L1MB3 LINE L1 5571 5792 -391 2075 132 36 41 chr10 10858572 10858937 -129457828 + THE1B LTR MaLR 1 363 -1 3044 152 42 17 chr10 10858937 10859306 -129457459 + L1MB3 LINE L1 5792 6183 0 2248 123 0 0 chr10 10859368 10859678 -129457087 - AluSx SINE Alu -2 310 1 236 125 54 0 chr10 10860851 10860907 -129455858 + AluS SINE Alu 14 72 -229 573 306 61 45 chr10 10861090 10861469 -129455296 - L2 LINE L2 -638 2676 2292 1994 131 31 0 chr10 10862257 10862548 -129454217 - AluSx SINE Alu -12 300 1 2097 120 0 0 chr10 10862786 10863060 -129453705 + AluSg SINE Alu 1 274 -36 4094 180 53 15 chr10 10863394 10863519 -129453246 - L1MD1 LINE L1 0 6636 6517 2300 113 48 17 chr10 10863519 10863872 -129452893 + THE1B LTR MaLR 1 364 0 4094 180 53 15 chr10 10863872 10864696 -129452069 - L1MD1 LINE L1 -119 6517 5651 5970 234 70 34 chr10 10864733 10869281 -129447484 - L1MD1 LINE L1 -1744 4796 1 345 62 0 0 chr10 10869457 10869505 -129447260 + (TG)n Simple_repeat Simple_repeat 2 49 0 2085 118 54 0 chr10 10869866 10870162 -129446603 - AluSx SINE Alu 0 312 1 312 27 0 0 chr10 10871861 10871898 -129444867 + (TG)n Simple_repeat Simple_repeat 2 38 0 2033 80 95 0 chr10 10871901 10872164 -129444601 - AluSg1 SINE Alu -21 288 1 1292 232 71 12 chr10 10872476 10872812 -129443953 + MLT1A1 LTR MaLR 10 365 0 195 42 0 0 chr10 10873726 10873750 -129443015 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 958 305 94 12 chr10 10873750 10874306 -129442459 - L2 LINE L2 -14 3299 2698 199 158 18 18 chr10 10874306 10874318 -129442447 + (TA)n Simple_repeat Simple_repeat 2 13 -45 2050 137 0 10 chr10 10874318 10874625 -129442140 + AluSx SINE Alu 1 304 -8 199 158 18 18 chr10 10874625 10874669 -129442096 + (TA)n Simple_repeat Simple_repeat 12 58 0 632 250 107 14 chr10 10874799 10875015 -129441750 + MIR SINE MIR 2 237 -25 1924 115 3 30 chr10 10875652 10875948 -129440817 - AluSx SINE Alu -24 288 1 21 0 0 0 chr10 10878691 10878712 -129438053 + AT_rich Low_complexity Low_complexity 1 21 0 243 286 163 0 chr10 10878966 10879043 -129437722 + MIR SINE MIR 59 157 -105 620 190 52 17 chr10 10879043 10879217 -129437548 + MER104 DNA MER2_type 1 180 0 243 286 163 0 chr10 10879217 10879237 -129437528 + MIR SINE MIR 157 172 -90 214 286 0 0 chr10 10880541 10880583 -129436182 - MIR SINE MIR -206 56 15 246 354 54 23 chr10 10881604 10881734 -129435031 + MIR SINE MIR 11 144 -118 268 261 101 34 chr10 10885157 10885276 -129431489 - MER117 DNA MER1_type 0 197 71 2082 140 0 10 chr10 10885673 10885966 -129430799 - AluSq SINE Alu -23 290 1 255 315 167 9 chr10 10886759 10886867 -129429898 - L2 LINE L2 0 3272 3148 3880 176 44 21 chr10 10888120 10888364 -129428401 - L1MA7 LINE L1 -25 6266 6029 1094 146 117 0 chr10 10888364 10888569 -129428196 - MER30 DNA MER1_type 0 230 2 3880 176 44 21 chr10 10888569 10889192 -129427573 - L1MA7 LINE L1 -262 6029 5379 212 307 26 33 chr10 10889648 10889801 -129426964 + L2 LINE L2 2264 2415 -899 2118 121 0 17 chr10 10890262 10890559 -129426206 + AluSx SINE Alu 7 298 -14 234 348 33 11 chr10 10891075 10891167 -129425598 - MIR SINE MIR -90 118 25 198 0 0 0 chr10 10891254 10891276 -129425489 + (TG)n Simple_repeat Simple_repeat 1 22 0 2205 121 3 0 chr10 10892608 10892914 -129423851 + AluSg SINE Alu 1 307 -3 3336 139 38 0 chr10 10893255 10893789 -129422976 - MER41C LTR ERV1 0 554 1 243 149 27 135 chr10 10894491 10894565 -129422200 + MER5A DNA MER1_type 106 171 -18 257 324 45 36 chr10 10896744 10896855 -129419910 + MIR3 SINE MIR 5 116 -92 431 315 158 59 chr10 10896937 10897756 -129419009 - L2 LINE L2 -943 2371 1472 2147 236 19 49 chr10 10898262 10898640 -129418125 - LTR53 LTR ERVL 0 519 160 2290 87 0 13 chr10 10898640 10898949 -129417816 + AluSg1 SINE Alu 1 305 -4 2147 236 19 49 chr10 10898949 10899105 -129417660 - LTR53 LTR ERVL -359 160 1 2323 102 0 0 chr10 10899225 10899518 -129417247 - AluSc SINE Alu -14 295 3 580 221 206 51 chr10 10899892 10900216 -129416549 - LTR50 LTR ERVL -10 785 512 225 0 0 0 chr10 10900216 10900241 -129416524 + (CTG)n Simple_repeat Simple_repeat 2 26 0 580 221 206 51 chr10 10900241 10900520 -129416245 - LTR50 LTR ERVL -283 512 1 1537 291 47 47 chr10 10900618 10901303 -129415462 - MER115 DNA AcHobo 0 693 9 826 281 58 27 chr10 10901299 10901627 -129415138 - LTR33 LTR ERVL -183 338 1 * 194 372 18 9 chr10 10902397 10902510 -129414255 + MIR SINE MIR 112 225 -37 609 80 0 0 chr10 10904109 10904184 -129412581 + AluY SINE Alu 5 79 -232 2045 71 0 8 chr10 10904209 10904463 -129412302 + AluY SINE Alu 48 299 -12 4706 118 9 2 chr10 10904510 10905140 -129411625 - MER41B LTR ERV1 0 635 1 563 291 81 14 chr10 10905349 10905559 -129411206 - MIR SINE MIR -34 228 5 2299 188 36 81 chr10 10905590 10906174 -129410591 - MER89 LTR ERV1 -1 558 1 350 123 0 4 chr10 10906767 10906985 -129409780 + AluSq SINE Alu 1 306 0 220 315 82 0 chr10 10907591 10907664 -129409101 + MIR SINE MIR 47 125 -83 201 167 0 24 chr10 10908870 10908912 -129407853 + (CA)n Simple_repeat Simple_repeat 2 42 0 2163 118 0 0 chr10 10910027 10910316 -129406449 + AluSx SINE Alu 1 289 -23 183 42 0 0 chr10 10910872 10910896 -129405869 + (GA)n Simple_repeat Simple_repeat 2 25 0 * 342 0 0 0 chr10 10910895 10910933 -129405832 + (TG)n Simple_repeat Simple_repeat 2 39 0 569 305 11 11 chr10 10911254 10911444 -129405321 + MIR3 SINE MIR 3 192 -16 344 327 19 0 chr10 10912230 10912337 -129404428 + MIR SINE MIR 53 161 -101 2150 159 31 29 chr10 10912358 10912478 -129404287 - MLT1B LTR MaLR -3 387 269 2256 120 0 0 chr10 10912478 10912786 -129403979 - AluSx SINE Alu -4 308 1 2150 159 31 29 chr10 10912786 10913049 -129403716 - MLT1B LTR MaLR -121 269 3 235 250 62 70 chr10 10913053 10913181 -129403584 - LTR16A LTR ERVL -10 440 314 2615 131 20 43 chr10 10913193 10913597 -129403168 - Tigger2a DNA MER2_type -2274 434 39 2968 148 12 26 chr10 10913597 10913904 -129402861 - LTR45B LTR ERV1 0 489 190 2376 84 3 0 chr10 10913904 10914200 -129402565 - AluSp SINE Alu -16 297 1 2968 148 12 26 chr10 10914200 10914384 -129402381 - LTR45B LTR ERV1 -299 190 5 2615 131 20 43 chr10 10914384 10914423 -129402342 - Tigger2a DNA MER2_type -2669 39 1 477 278 111 48 chr10 10914423 10914691 -129402074 - LTR16A LTR ERVL -147 303 19 1386 186 26 89 chr10 10916004 10916222 -129400543 - MLT1A2 LTR MaLR -16 358 173 2221 109 63 29 chr10 10916222 10916572 -129400193 - THE1B LTR MaLR 0 364 3 1386 186 26 89 chr10 10916572 10916735 -129400030 - MLT1A2 LTR MaLR -201 173 1 202 192 39 0 chr10 10916746 10916798 -129399967 + (CAGAGA)n Simple_repeat Simple_repeat 4 57 0 538 299 119 44 chr10 10916826 10917441 -129399324 - L2 LINE L2 -223 3090 2425 582 272 218 18 chr10 10917567 10917961 -129398804 + LTR33A LTR ERVL 2 474 -49 207 184 0 0 chr10 10918924 10918962 -129397803 + (CA)n Simple_repeat Simple_repeat 2 39 0 18228 34 1 1 chr10 10919238 10922071 -129394694 - L1PA2 LINE L1 -4 6151 3319 931 171 124 16 chr10 10922071 10922328 -129394437 + MER33 DNA MER1_type 30 314 -10 438 290 183 0 chr10 10922504 10922683 -129394082 + MIR SINE MIR 31 244 -18 4267 119 17 12 chr10 10923733 10924373 -129392392 + L1PB1 LINE L1 5506 6148 -3 589 254 141 39 chr10 10924601 10924857 -129391908 - L2 LINE L2 -1 3312 3031 379 200 14 0 chr10 10924857 10924927 -129391838 - AluS SINE Alu -237 71 1 455 278 125 23 chr10 10925565 10925781 -129390984 - MIR SINE MIR -2 260 23 262 234 0 16 chr10 10925906 10925970 -129390795 + CT-rich Low_complexity Low_complexity 1 63 0 792 131 0 0 chr10 10926532 10926639 -129390126 + AluSq/x SINE Alu 3 109 -203 570 29 0 0 chr10 10927234 10927302 -129389463 + (CA)n Simple_repeat Simple_repeat 2 69 0 501 284 106 23 chr10 10927476 10927694 -129389071 - MIR SINE MIR -12 250 15 2274 16 0 0 chr10 10929012 10929257 -129387508 - L1PA2 LINE L1 -2 6153 5909 831 268 19 48 chr10 10929957 10930226 -129386539 - LTR16A LTR ERVL 0 450 190 509 277 133 6 chr10 10930286 10930452 -129386313 - LTR16A LTR ERVL -248 202 16 404 265 118 38 chr10 10930484 10930722 -129386043 - L2 LINE L2 0 3313 3057 514 274 152 20 chr10 10930939 10931136 -129385629 + MER58A DNA MER1_type 1 223 -1 480 351 86 23 chr10 10931142 10931492 -129385273 - L2 LINE L2 -1728 1586 1215 2194 158 0 50 chr10 10932118 10932498 -129384267 - THE1B LTR MaLR -3 361 1 258 259 25 25 chr10 10932556 10932637 -129384128 - LTR33A LTR ERVL 0 523 443 30 77 0 0 chr10 10933544 10933609 -129383156 + AT_rich Low_complexity Low_complexity 1 65 0 497 320 55 28 chr10 10933635 10934063 -129382702 + L1MEd LINE L1 974 1498 -992 253 325 26 70 chr10 10934450 10934678 -129382087 - L2 LINE L2 -2202 1112 895 6971 72 32 6 chr10 10935372 10936454 -129380311 - L1PA10 LINE L1 0 6168 5080 22 0 0 0 chr10 10936931 10936953 -129379812 + AT_rich Low_complexity Low_complexity 1 22 0 2127 125 0 25 chr10 10937729 10938050 -129378715 - AluSq SINE Alu 0 313 1 279 0 0 0 chr10 10940397 10940428 -129376337 + (TTA)n Simple_repeat Simple_repeat 3 33 0 7773 24 0 2 chr10 10940428 10941573 -129375192 - L1PA4 LINE L1 -18 6137 4975 198 118 0 0 chr10 10942879 10942913 -129373852 + (CA)n Simple_repeat Simple_repeat 2 35 0 491 283 18 0 chr10 10943535 10943695 -129373070 + MIR3 SINE MIR 41 205 -3 2201 111 0 0 chr10 10944780 10945068 -129371697 + AluSg SINE Alu 1 288 -22 189 309 12 12 chr10 10945458 10945539 -129371226 - MIR3 SINE MIR -3 205 125 672 294 56 53 chr10 10945879 10946202 -129370563 + L3 LINE CR1 966 1289 -288 283 359 77 21 chr10 10946824 10947058 -129369707 + L3 LINE CR1 1316 1562 -15 2912 128 12 2 chr10 10947222 10947652 -129369113 - MER57B LTR ERV1 0 434 1 189 329 27 14 chr10 10947656 10947729 -129369036 + MER5A DNA MER1_type 4 77 -112 822 217 35 25 chr10 10947765 10947968 -129368797 + MER3 DNA MER1_type 5 209 0 193 188 42 42 chr10 10948068 10948116 -129368649 - L3 LINE CR1 -3 1574 1527 307 321 93 21 chr10 10949753 10949893 -129366872 - MER5A DNA MER1_type 0 189 40 * 413 257 51 25 chr10 10949758 10949911 -129366854 + MER5A DNA MER1_type 5 175 -3 217 309 12 12 chr10 10951373 10951454 -129365311 + MIR SINE MIR 44 124 -84 3283 137 79 57 chr10 10951981 10952578 -129364187 - MER4B LTR ERV1 0 610 1 189 315 22 22 chr10 10952625 10952717 -129364048 - MIR SINE MIR -111 151 60 324 320 20 48 chr10 10952767 10952914 -129363851 - MIR3 SINE MIR -62 146 4 214 326 31 10 chr10 10953726 10953824 -129362941 + MER5B DNA MER1_type 1 100 -78 710 293 137 30 chr10 10953982 10954647 -129362118 + L1ME4a LINE L1 5384 6119 -2 372 269 93 116 chr10 10955768 10956217 -129360548 - L2 LINE L2 -2 3270 2832 466 183 86 0 chr10 10956224 10956317 -129360448 - MLT1H LTR MaLR -3 546 446 310 337 20 0 chr10 10956386 10956484 -129360281 - MLT1H LTR MaLR -222 327 228 617 303 0 27 chr10 10956815 10957000 -129359765 + MIR SINE MIR 31 210 -52 370 360 57 19 chr10 10957083 10957400 -129359365 - L2 LINE L2 -663 2651 2323 1409 224 0 8 chr10 10958490 10958758 -129358007 + MER66B LTR ERV1 1 266 -220 1317 152 0 5 chr10 10958758 10958956 -129357809 + AluSg/x SINE Alu 99 295 -17 878 156 87 50 chr10 10958959 10959177 -129357588 + MER66A LTR ERV1 253 478 0 27 29 0 0 chr10 10960945 10960979 -129355786 + AT_rich Low_complexity Low_complexity 1 34 0 2266 82 30 0 chr10 10961796 10962099 -129354666 - AluSx SINE Alu 0 312 1 465 371 33 4 chr10 10962230 10962475 -129354290 + MIR SINE MIR 1 252 -10 2546 68 0 0 chr10 10962769 10963078 -129353687 - AluY SINE Alu -2 309 1 744 275 35 5 chr10 10963839 10964039 -129352726 - MIR SINE MIR -27 235 30 3953 65 18 0 chr10 10964818 10965308 -129351457 - L1PA10 LINE L1 0 6168 5670 25 0 0 0 chr10 10965702 10965727 -129351038 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr10 10965766 10965795 -129350970 + AT_rich Low_complexity Low_complexity 1 29 0 267 31 0 0 chr10 10966868 10966900 -129349865 + (CA)n Simple_repeat Simple_repeat 2 33 0 1709 172 10 3 chr10 10967018 10967314 -129349451 + AluSq SINE Alu 3 300 -13 4311 77 2 0 chr10 10967987 10968520 -129348245 + L1PA10 LINE L1 5619 6152 -16 24 0 0 0 chr10 10969494 10969518 -129347247 + AT_rich Low_complexity Low_complexity 1 24 0 236 250 36 0 chr10 10969690 10969746 -129347019 - tRNA-Ile-ATT tRNA tRNA -9 68 11 23 54 0 0 chr10 10969815 10969852 -129346913 + AT_rich Low_complexity Low_complexity 1 37 0 587 105 0 0 chr10 10970899 10970975 -129345790 + AluJ/FLAM SINE Alu 2 77 -235 1644 133 12 8 chr10 10970976 10971216 -129345549 + AluSq SINE Alu 40 280 -33 288 0 0 0 chr10 10971219 10971251 -129345514 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 189 279 68 87 chr10 10972224 10972377 -129344388 - MIR3 SINE MIR -63 145 9 227 208 0 0 chr10 10974838 10974886 -129341879 + L1MC4 LINE L1 6617 6664 -1378 2742 219 28 40 chr10 10978307 10978609 -129338156 - MER82 DNA MER2_type -6 647 343 2346 125 146 11 chr10 10978609 10978986 -129337779 + MSTA LTR MaLR 1 428 0 2742 219 28 40 chr10 10978986 10979337 -129337428 - MER82 DNA MER2_type -310 343 2 333 0 0 0 chr10 10979385 10979422 -129337343 + (TG)n Simple_repeat Simple_repeat 1 37 0 384 22 0 0 chr10 10979765 10979810 -129336955 + (TG)n Simple_repeat Simple_repeat 1 45 0 225 0 0 0 chr10 10979809 10979834 -129336931 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 861 161 0 22 chr10 10979834 10979971 -129336794 - AluJo/FRAM SINE Alu -37 275 142 1214 142 0 0 chr10 10979973 10980142 -129336623 - AluJo SINE Alu -139 173 5 410 259 178 11 chr10 10980339 10980524 -129336241 - MIR SINE MIR 0 262 47 238 356 19 0 chr10 10980524 10980628 -129336137 - L2 LINE L2 -577 2737 2632 450 334 106 50 chr10 10981027 10981763 -129335002 + L2 LINE L2 2443 3225 -47 2584 208 28 73 chr10 10981763 10982404 -129334361 - LTR9 LTR ERV1 0 612 1 450 334 106 50 chr10 10982404 10982446 -129334319 + L2 LINE L2 3225 3263 -9 705 220 38 0 chr10 10983210 10983342 -129333423 + MER58A DNA MER1_type 5 141 0 363 182 0 0 chr10 10983342 10983404 -129333361 + AluSp SINE Alu 138 199 -104 921 66 0 59 chr10 10983424 10983560 -129333205 + AluSg/x SINE Alu 175 302 -10 463 191 11 11 chr10 10983560 10983654 -129333111 + MER58A DNA MER1_type 131 224 0 2395 53 0 50 chr10 10983710 10984031 -129332734 + AluY SINE Alu 1 305 -6 561 70 0 0 chr10 10984032 10984103 -129332662 + Alu SINE Alu 2 72 -237 184 309 29 15 chr10 10984559 10984627 -129332138 - MIR3 SINE MIR -45 163 95 850 142 0 0 chr10 10985243 10985363 -129331402 + AluJ SINE Alu 1 120 -192 232 271 0 0 chr10 10985363 10985411 -129331354 + (TATATG)n Simple_repeat Simple_repeat 5 52 0 934 213 0 0 chr10 10985418 10985592 -129331173 + AluJ SINE Alu 130 303 -9 2376 46 40 16 chr10 10985728 10986032 -129330733 + AluY SINE Alu 1 311 0 636 297 74 13 chr10 10986650 10986879 -129329886 - MIR SINE MIR -11 251 9 256 198 22 110 chr10 10988267 10988358 -129328407 - MIR SINE MIR -57 205 123 2182 114 0 3 chr10 10990971 10991268 -129325497 - AluSx SINE Alu -16 296 1 210 399 34 11 chr10 10991436 10991614 -129325151 - MIR SINE MIR -12 250 69 1407 56 1 1 chr10 10991624 10991812 -129324953 - L1PA6 LINE L1 -291 5863 5698 757 47 0 47 chr10 10991812 10991912 -129324853 + L1PA5 LINE L1 6053 6153 -1 249 33 0 0 chr10 10992926 10992956 -129323809 + (A)n Simple_repeat Simple_repeat 1 30 0 275 310 80 0 chr10 10995001 10995114 -129321651 + MIR SINE MIR 121 242 -20 261 98 0 0 chr10 10995482 10995523 -129321242 + (CA)n Simple_repeat Simple_repeat 1 41 0 802 274 83 76 chr10 10995965 10996593 -129320172 - L1MC4a LINE L1 -1909 5899 5268 31 68 0 0 chr10 10996871 10996930 -129319835 + AT_rich Low_complexity Low_complexity 1 59 0 482 333 50 20 chr10 10997167 10997464 -129319301 - L1MC4a LINE L1 -1537 4609 4304 440 286 63 80 chr10 10997642 10997717 -129319048 - MLT1I LTR MaLR -6 403 328 1667 93 0 9 chr10 10997717 10997943 -129318822 - AluSc SINE Alu -3 306 83 440 286 63 80 chr10 10997943 10998230 -129318535 - MLT1I LTR MaLR -81 328 47 312 137 0 0 chr10 11001410 11001461 -129315304 + (TTCA)n Simple_repeat Simple_repeat 4 54 0 268 378 68 60 chr10 11003001 11003337 -129313428 + L2 LINE L2 2920 3258 -14 289 314 87 115 chr10 11003356 11003748 -129313017 + L2 LINE L2 2892 3272 0 181 299 184 23 chr10 11004283 11004370 -129312395 + MIR SINE MIR 47 147 -115 2144 119 0 25 chr10 11004495 11004813 -129311952 - AluSq SINE Alu -3 310 1 2569 124 3 0 chr10 11006273 11006636 -129310129 + THE1B LTR MaLR 1 364 0 270 56 0 0 chr10 11007458 11007494 -129309271 + (TG)n Simple_repeat Simple_repeat 2 37 0 1923 164 0 3 chr10 11008438 11008737 -129308028 + AluJo SINE Alu 3 300 -12 310 321 57 0 chr10 11008754 11008860 -129307905 + L2 LINE L2 3151 3262 -10 184 237 26 0 chr10 11009918 11009956 -129306809 - MIR SINE MIR -76 132 94 207 241 51 51 chr10 11011234 11011313 -129305452 + L2 LINE L2 2095 2173 -1141 1156 186 4 8 chr10 11013680 11013917 -129302848 + L1MB7 LINE L1 5431 5666 -518 40546 35 23 2 chr10 11013923 11019950 -129296815 + L1PA2 LINE L1 1 6155 0 1532 216 44 33 chr10 11019991 11020441 -129296324 + L1MB7 LINE L1 5652 6106 -78 358 82 0 0 chr10 11020470 11020519 -129296246 - MADE1 DNA Mariner -28 52 4 320 132 0 0 chr10 11020523 11020576 -129296189 + L1MB8 LINE L1 6120 6172 -6 349 299 70 88 chr10 11020593 11020877 -129295888 + L1ME3A LINE L1 5811 6089 -81 821 180 40 110 chr10 11022899 11023199 -129293566 + MLT1D LTR MaLR 82 360 -145 214 321 83 0 chr10 11023325 11023409 -129293356 - MIR SINE MIR -82 180 90 1804 208 69 38 chr10 11024100 11024625 -129292140 - L1ME2 LINE L1 -1 6163 5623 867 217 77 114 chr10 11024778 11025235 -129291530 - LTR16A1 LTR ERVL -14 443 4 250 238 24 12 chr10 11028410 11028494 -129288271 + (TA)n Simple_repeat Simple_repeat 1 85 0 2819 16 0 0 chr10 11029646 11029957 -129286808 + AluY SINE Alu 1 311 0 241 185 19 19 chr10 11030009 11030063 -129286702 + (CA)n Simple_repeat Simple_repeat 1 54 0 287 267 140 7 chr10 11031209 11031359 -129285406 - L1ME1 LINE L1 -4 6162 5993 2042 147 7 0 chr10 11031741 11032041 -129284724 + AluSx SINE Alu 1 302 -10 230 373 13 32 chr10 11032201 11032359 -129284406 + MIR SINE MIR 49 203 -59 189 302 208 10 chr10 11032921 11032965 -129283800 + L2 LINE L2 3153 3187 -85 2227 113 3 0 chr10 11032965 11033267 -129283498 - AluSp SINE Alu -10 303 1 189 302 208 10 chr10 11033267 11033318 -129283447 + L2 LINE L2 3187 3267 -5 5331 183 27 62 chr10 11033492 11033954 -129282811 - L1MC1 LINE L1 -9 6604 6127 1774 193 10 0 chr10 11033954 11034259 -129282506 + AluJb SINE Alu 3 310 -2 5331 183 27 62 chr10 11034259 11034796 -129281969 - L1MC1 LINE L1 -486 6127 5573 2105 137 0 7 chr10 11034796 11035095 -129281670 - AluSx SINE Alu -15 297 1 5331 183 27 62 chr10 11035095 11036430 -129280335 - L1MC1 LINE L1 -1040 5573 4346 8837 189 71 50 chr10 11036430 11039932 -129276833 - L1MC1 LINE L1 -2824 3602 28 401 322 27 27 chr10 11040503 11040686 -129276079 + MER5A DNA MER1_type 3 185 -4 2189 129 0 0 chr10 11042346 11042655 -129274110 - AluSx SINE Alu -3 309 1 401 196 144 26 chr10 11042768 11042921 -129273844 - Charlie2 DNA MER1_type -147 2715 2545 435 83 0 0 chr10 11043197 11043257 -129273508 + (TATG)n Simple_repeat Simple_repeat 3 62 0 244 196 22 0 chr10 11043295 11043341 -129273424 - MER21A LTR ERV1 -203 728 682 * 1920 251 32 18 chr10 11043315 11043875 -129272890 - MER77 LTR ERV1 -7 598 56 1322 231 40 6 chr10 11044453 11044782 -129271983 - MER58B DNA MER1_type 0 341 2 1730 173 3 7 chr10 11047526 11047827 -129268938 + AluJb SINE Alu 1 300 -12 2128 151 47 16 chr10 11049526 11049890 -129266875 + THE1C LTR MaLR 1 375 0 1507 181 27 34 chr10 11051791 11052084 -129264681 + AluJo SINE Alu 1 291 -21 2025 158 137 11 chr10 11052156 11052536 -129264229 - MSTA LTR MaLR 0 428 1 180 268 71 93 chr10 11053594 11053663 -129263102 + MIR SINE MIR 2 71 -191 1967 145 7 3 chr10 11053663 11053959 -129262806 + AluSx SINE Alu 1 297 -15 180 268 71 93 chr10 11053959 11054072 -129262693 + MIR SINE MIR 71 180 -82 43118 34 26 2 chr10 11054072 11060064 -129256701 - L1PA3 LINE L1 -1 6154 12 1567 175 18 80 chr10 11060533 11060863 -129255902 - MLT1A1 LTR MaLR 0 365 61 1675 138 0 23 chr10 11060863 11061123 -129255642 - AluSx SINE Alu -22 290 37 1567 175 18 80 chr10 11061123 11061181 -129255584 - MLT1A1 LTR MaLR -304 61 1 208 360 13 39 chr10 11061381 11061534 -129255231 + MIR SINE MIR 84 232 -30 257 262 40 13 chr10 11061992 11062141 -129254624 + (TA)n Simple_repeat Simple_repeat 2 154 0 226 264 28 14 chr10 11062431 11062503 -129254262 - L2 LINE L2 -38 3234 3162 794 239 46 21 chr10 11112590 11112829 -129203936 + L1ME1 LINE L1 5026 5270 -876 322 85 0 0 chr10 11112829 11112876 -129203889 + MADE1 DNA Mariner 1 47 -33 3059 232 32 48 chr10 11112895 11113803 -129202962 + L1ME1 LINE L1 5269 6161 -5 473 164 0 65 chr10 11113813 11114079 -129202686 + GA-rich Low_complexity Low_complexity 1 248 0 247 343 6 45 chr10 11115208 11115264 -129201501 - L1MC/D LINE L1 -1907 5901 5844 1777 162 3 23 chr10 11115264 11115573 -129201192 - AluJo SINE Alu -9 303 1 247 343 6 45 chr10 11115573 11115694 -129201071 - L1MC/D LINE L1 -1964 5844 5731 347 238 125 50 chr10 11116097 11116257 -129200508 + MIR SINE MIR 90 261 -1 1696 158 0 55 chr10 11116503 11116639 -129200126 + AluSx SINE Alu 1 143 -169 2460 80 3 3 chr10 11116639 11116950 -129199815 + AluY SINE Alu 1 311 0 1696 158 0 55 chr10 11116950 11117141 -129199624 + AluSx SINE Alu 143 310 -2 317 269 10 39 chr10 11117407 11117511 -129199254 - L2 LINE L2 -34 3279 3179 2377 91 0 0 chr10 11117750 11118048 -129198717 - AluSc SINE Alu 0 309 12 246 156 0 0 chr10 11118141 11118186 -129198579 + (CA)n Simple_repeat Simple_repeat 2 46 0 261 0 0 0 chr10 11118680 11118709 -129198056 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2566 62 0 3 chr10 11119257 11119562 -129197203 - AluY SINE Alu -7 304 1 2063 128 3 10 chr10 11119826 11120132 -129196633 - AluSx SINE Alu -8 304 1 296 306 44 49 chr10 11120814 11120997 -129195768 + L2 LINE L2 3132 3313 0 23 54 0 0 chr10 11121222 11121259 -129195506 + AT_rich Low_complexity Low_complexity 1 37 0 2172 127 3 16 chr10 11121456 11121772 -129194993 + AluSx SINE Alu 1 312 0 465 199 33 124 chr10 11123235 11123437 -129193328 + L2 LINE L2 3027 3205 -108 2062 84 59 0 chr10 11123437 11123710 -129193055 - AluSc SINE Alu -20 289 1 465 199 33 124 chr10 11123710 11123748 -129193017 + L2 LINE L2 3205 3245 -68 674 288 14 28 chr10 11123830 11124045 -129192720 + MIR SINE MIR 15 226 -36 2364 106 0 0 chr10 11124422 11124733 -129192032 - AluSq SINE Alu -2 311 1 260 111 0 0 chr10 11124828 11124864 -129191901 + (GAAA)n Simple_repeat Simple_repeat 2 37 0 746 146 6 24 chr10 11124864 11125029 -129191736 + GA-rich Low_complexity Low_complexity 1 162 0 21 36 0 0 chr10 11125497 11125525 -129191240 + AT_rich Low_complexity Low_complexity 1 28 0 218 265 15 15 chr10 11125698 11125766 -129190999 - MIR SINE MIR -67 141 74 2199 119 0 10 chr10 11125889 11126192 -129190573 + AluSx SINE Alu 1 300 -12 198 264 0 38 chr10 11126368 11126421 -129190344 - MIR SINE MIR -13 249 199 1530 176 0 88 chr10 11126448 11126777 -129189988 - AluJo SINE Alu -12 300 1 196 254 90 97 chr10 11126837 11126971 -129189794 + L2 LINE L2 3181 3313 0 2142 134 0 0 chr10 11127648 11127955 -129188810 - AluSx SINE Alu -5 307 1 1657 178 0 26 chr10 11128374 11128683 -129188082 - AluJo SINE Alu -11 301 1 722 257 41 41 chr10 11128689 11128907 -129187858 + MER20 DNA MER1_type 1 218 -1 2033 144 3 0 chr10 11130031 11130336 -129186429 + AluSx SINE Alu 1 306 -6 352 240 11 27 chr10 11131720 11131903 -129184862 + GA-rich Low_complexity Low_complexity 1 180 0 2127 126 0 0 chr10 11131980 11132297 -129184468 - AluSx SINE Alu 0 317 1 2350 84 7 0 chr10 11132302 11132610 -129184155 - AluSx SINE Alu -2 310 1 238 240 123 45 chr10 11132668 11132822 -129183943 - L2 LINE L2 -1690 1624 1459 23 0 0 0 chr10 11134740 11134763 -129182002 + AT_rich Low_complexity Low_complexity 1 23 0 1819 15 0 0 chr10 11135153 11135353 -129181412 + AluY SINE Alu 111 310 -1 1372 215 90 56 chr10 11137201 11137577 -129179188 + MSTD LTR MaLR 3 391 -5 1530 313 125 33 chr10 11137889 11138469 -129178296 + L2 LINE L2 1905 2599 -715 1762 189 3 3 chr10 11138469 11138771 -129177994 - AluJo SINE Alu -10 302 1 1530 313 125 33 chr10 11138771 11139093 -129177672 + L2 LINE L2 2599 2890 -424 219 289 259 31 chr10 11139103 11139331 -129177434 + L2 LINE L2 3028 3307 -6 833 263 29 0 chr10 11139487 11139696 -129177069 + MER58A DNA MER1_type 10 224 0 340 156 62 0 chr10 11139882 11139946 -129176819 + L2 LINE L2 3232 3299 -14 272 273 0 0 chr10 11139964 11140041 -129176724 + (TGAA)n Simple_repeat Simple_repeat 1 77 0 545 315 94 8 chr10 11140233 11140468 -129176297 + MIR SINE MIR 7 261 -1 859 231 56 19 chr10 11140563 11140779 -129175986 + MIR SINE MIR 2 225 -37 2593 115 43 0 chr10 11142794 11143143 -129173622 - THE1B LTR MaLR 0 364 1 1749 144 52 20 chr10 11143246 11143593 -129173172 + L1MA7 LINE L1 5934 6291 0 260 122 41 0 chr10 11143707 11143756 -129173009 + (TATG)n Simple_repeat Simple_repeat 2 52 0 1838 142 0 27 chr10 11144055 11144350 -129172415 + AluJb SINE Alu 1 287 -25 4968 151 27 21 chr10 11144354 11145216 -129171549 - L1MA6 LINE L1 -12 6288 5422 376 317 25 17 chr10 11145330 11145450 -129171315 + L2 LINE L2 3147 3267 -5 2032 121 0 33 chr10 11146924 11147230 -129169535 + AluSx SINE Alu 13 308 -4 228 369 72 0 chr10 11147431 11147542 -129169223 - MIR3 SINE MIR -6 202 84 465 240 0 10 chr10 11147881 11147985 -129168780 - MER5A DNA MER1_type -83 106 4 2224 105 6 16 chr10 11148159 11148472 -129168293 - AluSx SINE Alu -2 310 1 247 200 22 0 chr10 11149704 11149749 -129167016 - LTR16C LTR ERVL -10 481 436 188 316 0 35 chr10 11150131 11150188 -129166577 + L2 LINE L2 3195 3249 -23 188 316 0 35 chr10 11150193 11150250 -129166515 + L2 LINE L2 3195 3249 -23 192 236 0 180 chr10 11150255 11150304 -129166461 + L2 LINE L2 3195 3223 -49 2104 115 7 7 chr10 11150304 11150628 -129166137 - AluSx SINE Alu 0 312 1 192 236 0 180 chr10 11150628 11150667 -129166098 + L2 LINE L2 3223 3267 -5 2458 76 0 0 chr10 11150715 11151017 -129165748 + AluY SINE Alu 1 302 -9 2094 143 7 0 chr10 11152754 11153054 -129163711 + AluSx SINE Alu 1 302 -10 1780 236 94 31 chr10 11153226 11153769 -129162996 - MLT1E LTR MaLR -2 591 15 953 183 144 18 chr10 11154105 11154334 -129162431 + LOR1a LTR ERV1 238 495 -2 185 0 40 0 chr10 11154637 11154662 -129162103 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 1806 153 0 11 chr10 11154662 11154944 -129161821 - AluSx SINE Alu -33 279 1 207 310 97 44 chr10 11155063 11155176 -129161589 + MIR SINE MIR 20 138 -70 520 283 66 0 chr10 11155178 11155330 -129161435 + L2 LINE L2 1858 2019 -1295 238 276 175 72 chr10 11155457 11155638 -129161127 - L2 LINE L2 -1426 1888 1727 2145 134 0 3 chr10 11155638 11155945 -129160820 - AluSx SINE Alu -6 306 1 238 276 175 72 chr10 11155945 11156140 -129160625 - L2 LINE L2 -1587 1727 1473 567 234 81 53 chr10 11157702 11157911 -129158854 - MIR SINE MIR -36 226 12 206 200 13 6 chr10 11158627 11158672 -129158093 + L2 LINE L2 3186 3272 -41 1844 142 0 77 chr10 11160552 11160890 -129155875 + AluSx SINE Alu 1 312 0 1530 193 53 3 chr10 11162194 11162479 -129154286 - AluJo SINE Alu -13 299 1 1483 292 46 52 chr10 11164605 11165254 -129151511 + L1MC4a LINE L1 4945 5412 -758 2174 102 0 7 chr10 11165254 11165588 -129151177 - AluSg SINE Alu 0 332 1 1483 292 46 52 chr10 11165588 11165981 -129150784 + L1MC4a LINE L1 5412 5806 -364 509 285 58 12 chr10 11166159 11166331 -129150434 - MIR SINE MIR -70 192 13 205 324 104 22 chr10 11166394 11166542 -129150223 + MER5A DNA MER1_type 6 189 0 628 273 46 21 chr10 11166576 11166770 -129149995 - MIR SINE MIR -61 201 3 211 264 0 0 chr10 11166892 11166945 -129149820 - MIR SINE MIR -60 148 96 290 360 23 6 chr10 11167491 11167666 -129149099 + MIR SINE MIR 30 207 -55 1794 160 3 29 chr10 11167688 11168000 -129148765 + AluJo SINE Alu 1 304 -8 326 295 97 14 chr10 11168040 11168247 -129148518 - L3 LINE CR1 -205 1372 1149 1605 172 51 3 chr10 11169618 11169914 -129146851 + AluJo SINE Alu 1 310 -2 1904 118 3 78 chr10 11170017 11170339 -129146426 + AluSx SINE Alu 1 298 -14 1981 138 3 22 chr10 11172505 11172823 -129143942 + AluSx SINE Alu 1 312 0 801 135 8 16 chr10 11172989 11173115 -129143650 + AluJb SINE Alu 1 125 -187 269 109 62 0 chr10 11173120 11173184 -129143581 + GA-rich Low_complexity Low_complexity 2 69 0 1475 202 10 17 chr10 11173483 11173775 -129142990 + AluJo SINE Alu 1 290 -22 573 15 0 0 chr10 11174037 11174103 -129142662 + (TTTTG)n Simple_repeat Simple_repeat 5 70 0 2070 99 0 48 chr10 11174103 11174397 -129142368 - AluSx SINE Alu -32 280 1 699 178 153 0 chr10 11176488 11176645 -129140120 - MER5A DNA MER1_type -7 182 2 2503 152 7 22 chr10 11178029 11178438 -129138327 - MER57A LTR ERV1 0 403 1 501 270 68 20 chr10 11178474 11178838 -129137927 - LTR16B LTR ERVL 0 464 48 189 0 0 0 chr10 11178961 11178982 -129137783 + (CA)n Simple_repeat Simple_repeat 1 21 0 1162 134 0 29 chr10 11180140 11180311 -129136454 + AluSg/x SINE Alu 124 289 -23 230 276 17 0 chr10 11180599 11180657 -129136108 + C-rich Low_complexity Low_complexity 3 61 0 2001 131 7 0 chr10 11181102 11181409 -129135356 - AluSx SINE Alu 0 309 1 207 24 24 48 chr10 11182603 11182645 -129134120 + (TTG)n Simple_repeat Simple_repeat 2 42 0 2082 132 0 0 chr10 11182648 11182929 -129133836 - AluSx SINE Alu -31 281 1 419 145 0 0 chr10 11182964 11183040 -129133725 - L1MA9 LINE L1 -10 6302 6227 261 267 27 0 chr10 11183313 11183388 -129133377 - MER103 DNA DNA 0 166 90 238 305 146 25 chr10 11183450 11183765 -129133000 + L2 LINE L2 1990 2342 -972 2019 113 33 3 chr10 11184050 11184350 -129132415 + AluSx SINE Alu 1 309 -3 1473 196 0 4 chr10 11184635 11184910 -129131855 - AluJo SINE Alu -38 274 1 530 273 173 18 chr10 11185049 11185269 -129131496 + MIR SINE MIR 8 261 -1 193 313 24 60 chr10 11186081 11186164 -129130601 + MIR SINE MIR 18 97 -165 1585 181 0 52 chr10 11186166 11186476 -129130289 - AluJb SINE Alu -18 294 1 1325 197 114 62 chr10 11186765 11187226 -129129539 - MER66A LTR ERV1 0 478 97 309 337 8 32 chr10 11187288 11187445 -129129320 - MIR SINE MIR -66 142 1 463 349 96 0 chr10 11188797 11188995 -129127770 + MIR SINE MIR 25 241 -21 186 71 0 0 chr10 11189067 11189095 -129127670 + (T)n Simple_repeat Simple_repeat 1 28 0 2123 136 0 0 chr10 11190431 11190740 -129126025 + AluJb SINE Alu 1 309 -3 482 257 27 81 chr10 11191630 11191830 -129124935 + L2 LINE L2 2921 3105 -208 653 233 0 0 chr10 11191830 11191963 -129124802 - FLAM_C SINE Alu 0 133 1 482 257 27 81 chr10 11191963 11192023 -129124742 + L2 LINE L2 3105 3167 -146 189 224 41 0 chr10 11192143 11192192 -129124573 + L2 LINE L2 3262 3312 -1 593 242 26 13 chr10 11192752 11192905 -129123860 - MIR SINE MIR -3 259 105 2301 116 3 0 chr10 11192987 11193297 -129123468 - AluSq SINE Alu -2 311 1 2294 110 10 7 chr10 11194597 11194907 -129121858 - AluSx SINE Alu -1 311 1 429 310 155 14 chr10 11195090 11195303 -129121462 - MIR SINE MIR 0 262 20 33 25 0 0 chr10 11195801 11195841 -129120924 + AT_rich Low_complexity Low_complexity 1 40 0 5892 87 27 60 chr10 11198769 11199337 -129117428 + L1PB2 LINE L1 5255 5783 -368 180 0 0 0 chr10 11199337 11199357 -129117408 + (GA)n Simple_repeat Simple_repeat 2 21 0 5892 87 27 60 chr10 11199357 11199713 -129117052 + L1PB2 LINE L1 5783 6149 -2 343 293 154 35 chr10 11200833 11201092 -129115673 + L1ME3A LINE L1 5307 5596 -2212 409 291 110 0 chr10 11201112 11201366 -129115399 + L1ME3A LINE L1 5651 5932 -189 195 42 0 0 chr10 11202008 11202032 -129114733 + (TG)n Simple_repeat Simple_repeat 1 24 0 212 210 32 16 chr10 11202237 11202299 -129114466 + (TG)n Simple_repeat Simple_repeat 2 64 0 355 292 73 7 chr10 11203006 11203143 -129113622 - L2 LINE L2 -6 3307 3162 262 255 49 0 chr10 11203719 11203821 -129112944 + (TAGA)n Simple_repeat Simple_repeat 3 109 0 1440 252 66 22 chr10 11203822 11204348 -129112417 - MLT2F LTR ERVL -60 603 9 256 310 69 35 chr10 11204407 11204552 -129112213 - L2 LINE L2 -216 3056 2907 651 299 57 30 chr10 11204562 11204784 -129111981 - MER90 LTR ERV1 -13 601 368 1674 162 114 11 chr10 11204784 11205135 -129111630 + MLT1B LTR MaLR 4 390 0 651 299 57 30 chr10 11205135 11205210 -129111555 - MER90 LTR ERV1 -246 368 296 1609 156 58 134 chr10 11205491 11205819 -129110946 + Charlie3 DNA MER1_type 37 2712 0 274 328 38 55 chr10 11206436 11206619 -129110146 - L2 LINE L2 -243 3029 2850 459 214 43 26 chr10 11206975 11207092 -129109673 + L1ME3A LINE L1 6051 6169 -1 346 153 0 9 chr10 11208297 11208368 -129108397 + FAM SINE Alu 115 174 -1 2625 84 31 6 chr10 11208900 11209255 -129107510 + THE1B LTR MaLR 1 364 0 415 276 103 26 chr10 11210294 11210450 -129106315 - L2 LINE L2 -12 3301 3134 975 188 0 0 chr10 11210500 11210660 -129106105 + FRAM SINE Alu 4 163 -3 2224 114 35 44 chr10 11213062 11213429 -129103336 - THE1B LTR MaLR 0 364 1 208 197 0 45 chr10 11214623 11214689 -129102076 - MIR SINE MIR -110 152 90 303 93 0 0 chr10 11215446 11215489 -129101276 + (TG)n Simple_repeat Simple_repeat 2 44 0 457 68 27 0 chr10 11216272 11216346 -129100419 + (GA)n Simple_repeat Simple_repeat 2 77 0 212 278 0 44 chr10 11216585 11216675 -129100090 + GA-rich Low_complexity Low_complexity 2 87 0 354 80 0 0 chr10 11220360 11220410 -129096355 + (TG)n Simple_repeat Simple_repeat 1 50 0 304 184 78 19 chr10 11221574 11221677 -129095088 - MIR SINE MIR -73 189 81 23 0 0 0 chr10 11222498 11222521 -129094244 + AT_rich Low_complexity Low_complexity 1 23 0 310 269 110 39 chr10 11224230 11224563 -129092202 - MLT1K LTR MaLR -2 597 252 232 192 13 64 chr10 11225181 11225259 -129091506 + HSMAR1 DNA Mariner 1214 1287 0 2346 110 0 0 chr10 11225755 11226064 -129090701 + AluSg SINE Alu 1 309 -1 1422 188 4 4 chr10 11226069 11226319 -129090446 + AluJo SINE Alu 1 250 -62 188 32 97 0 chr10 11226342 11226373 -129090392 + A-rich Low_complexity Low_complexity 4 37 0 2168 131 3 0 chr10 11228190 11228502 -129088263 - AluSq SINE Alu 0 313 1 2156 118 7 0 chr10 11228800 11229097 -129087668 - AluSq SINE Alu -14 299 1 565 340 57 37 chr10 11229544 11230311 -129086454 - L2 LINE L2 -213 3059 2276 2297 203 17 53 chr10 11230322 11230799 -129085966 + MLT2B1 LTR ERVL 1 459 -61 450 0 0 0 chr10 11230799 11230849 -129085916 + (TG)n Simple_repeat Simple_repeat 2 51 0 2297 203 17 53 chr10 11230849 11230903 -129085862 + MLT2B1 LTR ERVL 459 513 -7 482 321 124 9 chr10 11230927 11231372 -129085393 - L2 LINE L2 -1069 2245 1750 902 152 0 0 chr10 11231653 11231785 -129084980 + FLAM_C SINE Alu 1 132 -11 373 125 0 0 chr10 11231790 11231846 -129084919 + Alu SINE Alu 240 295 -6 321 243 76 35 chr10 11233792 11233957 -129082808 - LTR16A1 LTR ERVL 0 479 323 1283 321 56 39 chr10 11235297 11236064 -129080701 - ERVL LTR ERVL -1313 4451 3672 216 135 0 0 chr10 11236101 11236138 -129080627 + (CCA)n Simple_repeat Simple_repeat 1 37 0 27 0 0 0 chr10 11236356 11236383 -129080382 + AT_rich Low_complexity Low_complexity 1 27 0 2795 20 0 0 chr10 11236608 11236910 -129079855 + AluY SINE Alu 1 302 -9 1369 81 0 0 chr10 11236910 11237083 -129079682 + AluY SINE Alu 133 305 -6 2090 141 3 0 chr10 11237455 11237767 -129078998 - AluSq SINE Alu 0 313 1 196 398 59 0 chr10 11238004 11238122 -129078643 - L2 LINE L2 -11 3261 3137 2218 104 0 3 chr10 11238374 11238686 -129078079 + AluSx SINE Alu 1 311 0 305 341 70 51 chr10 11238689 11239143 -129077622 - L2 LINE L2 -541 2773 2311 620 62 0 0 chr10 11239143 11239223 -129077542 + AluSg/x SINE Alu 201 280 -32 216 0 0 0 chr10 11239223 11239247 -129077518 + (CAAT)n Simple_repeat Simple_repeat 4 27 0 254 365 29 22 chr10 11239763 11239900 -129076865 - MER5A DNA MER1_type 0 189 52 234 250 36 24 chr10 11240215 11240299 -129076466 + MLT1K LTR MaLR 321 405 -183 2014 127 22 60 chr10 11240370 11240739 -129076026 + THE1A LTR MaLR 1 355 0 226 219 0 0 chr10 11240788 11240829 -129075936 + MLT1K LTR MaLR 548 588 0 252 327 58 10 chr10 11241137 11241241 -129075524 + MIR SINE MIR 35 143 -65 279 247 113 31 chr10 11242507 11242604 -129074161 + MER5B DNA MER1_type 2 106 -72 380 298 27 98 chr10 11243041 11243237 -129073528 - L2 LINE L2 -15 3298 3090 2516 129 48 12 chr10 11243237 11243649 -129073116 + MSTA LTR MaLR 2 428 0 380 298 27 98 chr10 11243649 11243763 -129073002 - L2 LINE L2 -223 3090 2970 2151 128 7 0 chr10 11243763 11244069 -129072696 - AluSx SINE Alu -3 309 2 380 298 27 98 chr10 11244069 11244242 -129072523 - L2 LINE L2 -343 2970 2879 1721 155 61 0 chr10 11244242 11244520 -129072245 + AluSx SINE Alu 1 295 -17 380 298 27 98 chr10 11244520 11244710 -129072055 - L2 LINE L2 -434 2879 2677 233 344 79 46 chr10 11245849 11246813 -129069952 + L2 LINE L2 1966 2961 -353 255 227 0 30 chr10 11248367 11248433 -129068332 + CT-rich Low_complexity Low_complexity 6 69 0 454 283 35 52 chr10 11248509 11248682 -129068083 - MER5B DNA MER1_type -6 172 3 2186 104 0 0 chr10 11249348 11249671 -129067094 - AluSc SINE Alu 0 324 2 1898 151 91 0 chr10 11250042 11250228 -129066537 + MER7A DNA MER2_type 1 169 -2869 2670 107 0 6 chr10 11250228 11250594 -129066171 - THE1B LTR MaLR 0 364 1 1898 151 91 0 chr10 11250594 11250726 -129066039 + MER7A DNA MER2_type 169 346 0 1214 199 92 40 chr10 11250730 11251057 -129065708 - MER2 DNA MER2_type 0 344 1 1763 178 108 52 chr10 11251057 11251501 -129065264 - MLT2B1 LTR ERVL -51 469 1 1692 180 80 42 chr10 11252041 11252491 -129064274 + MLT1C LTR MaLR 1 467 0 2184 118 3 13 chr10 11252598 11252903 -129063862 + AluSc SINE Alu 1 302 -7 4148 183 110 4 chr10 11253010 11253757 -129063008 - LTR1B LTR ERV1 0 826 1 539 261 14 7 chr10 11254083 11254221 -129062544 - MER5B DNA MER1_type 0 178 40 4210 127 13 27 chr10 11254230 11254924 -129061841 + L1MA8 LINE L1 5607 6290 -1 209 288 141 28 chr10 11255018 11255195 -129061570 + MIR SINE MIR 15 211 -51 240 86 0 0 chr10 11255778 11255813 -129060952 + (CA)n Simple_repeat Simple_repeat 2 36 0 180 0 0 0 chr10 11256120 11256140 -129060625 + (CA)n Simple_repeat Simple_repeat 1 20 0 2308 117 0 0 chr10 11257347 11257656 -129059109 - AluSx SINE Alu -3 309 1 574 303 122 30 chr10 11258124 11258649 -129058116 - L1ME4a LINE L1 -195 5926 5354 633 291 66 0 chr10 11259779 11259975 -129056790 + MIR SINE MIR 28 236 -26 445 218 250 45 chr10 11260626 11260846 -129055919 + MER5C DNA MER1_type 25 289 -35 441 179 28 28 chr10 11260846 11260991 -129055774 + GA-rich Low_complexity Low_complexity 2 146 0 688 175 30 85 chr10 11262792 11262992 -129053773 + MER53 DNA DNA 1 189 0 201 233 0 0 chr10 11264823 11264866 -129051899 + (CCCCAA)n Simple_repeat Simple_repeat 3 45 0 437 280 0 65 chr10 11265060 11265228 -129051537 + MIR SINE MIR 80 236 -26 776 248 135 30 chr10 11266137 11266537 -129050228 - MER113 DNA MER1_type? -45 476 35 1888 154 3 25 chr10 11268091 11268410 -129048355 + AluSx SINE Alu 1 312 0 195 42 0 0 chr10 11268483 11268507 -129048258 + (CCCCCA)n Simple_repeat Simple_repeat 1 24 0 237 342 135 0 chr10 11269130 11269252 -129047513 - L1ME LINE L1 -214 5907 5803 1806 108 0 4 chr10 11269252 11269493 -129047272 - AluSq SINE Alu -20 293 54 237 342 135 0 chr10 11269493 11269563 -129047202 - L1ME LINE L1 -318 5803 5689 2269 101 3 3 chr10 11271084 11271390 -129045375 + AluSc SINE Alu 1 306 -3 809 321 82 27 chr10 11271745 11272462 -129044303 + L2 LINE L2 2307 3068 -245 257 275 14 0 chr10 11272499 11272568 -129044197 + MER116 DNA Mariner 7 76 -4 229 291 187 8 chr10 11272573 11272707 -129044058 + L2 LINE L2 3118 3275 -38 213 39 0 0 chr10 11272711 11272737 -129044028 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 213 333 16 0 chr10 11272776 11272839 -129043926 + L2 LINE L2 3203 3266 -47 864 252 28 33 chr10 11273053 11273267 -129043498 - MER58A DNA MER1_type 0 224 12 429 330 36 10 chr10 11273935 11274129 -129042636 - MIR SINE MIR -1 261 63 807 147 0 21 chr10 11274379 11274522 -129042243 - MER67A LTR ERV1 -322 221 82 487 152 48 29 chr10 11274547 11274652 -129042113 - MER67A LTR ERV1 -432 111 5 1495 207 23 42 chr10 11274658 11275011 -129041754 - MER67A-int LTR ERV1 -23 4913 4568 2278 106 0 3 chr10 11275094 11275397 -129041368 - AluSc SINE Alu -7 302 1 382 170 0 205 chr10 11275595 11275766 -129040999 - MER67A-int LTR ERV1 -467 4469 4334 260 191 162 15 chr10 11275771 11275839 -129040926 - LTR37A LTR ERV1 -336 90 13 6243 218 30 72 chr10 11275854 11277719 -129039046 - MER67A-int LTR ERV1 -687 4249 2463 257 214 36 80 chr10 11277756 11277868 -129038897 - MER67B-int LTR ERV1 -3799 4321 4215 856 251 33 45 chr10 11277871 11278296 -129038469 + MLT1B LTR MaLR 1 387 -3 357 237 92 15 chr10 11278300 11278431 -129038334 - MER67B-int LTR ERV1 -2579 2357 2217 * 550 224 75 42 chr10 11278398 11278639 -129038126 - MER67B-int LTR ERV1 -3004 1932 1684 4543 208 127 47 chr10 11278691 11279992 -129036773 - MER67B-int LTR ERV1 -3438 1498 94 1947 206 33 70 chr10 11280128 11280814 -129035951 - MER67B LTR ERV1 -32 558 8 2258 142 39 25 chr10 11280971 11281330 -129035435 - THE1B LTR MaLR 0 364 1 186 167 258 30 chr10 11281451 11281517 -129035248 + L2 LINE L2 3168 3248 -24 490 155 0 36 chr10 11282626 11282710 -129034055 - MER58A DNA MER1_type -24 83 3 234 0 0 0 chr10 11283108 11283134 -129033631 + (A)n Simple_repeat Simple_repeat 1 26 0 4328 78 49 7 chr10 11286093 11286681 -129030084 - L1MA1 LINE L1 0 6302 5690 309 276 71 10 chr10 11286773 11286871 -129029894 + MIR SINE MIR 9 112 -150 1993 108 0 78 chr10 11287435 11287769 -129028996 - AluSx SINE Alu -2 310 3 297 246 78 53 chr10 11287912 11288090 -129028675 + MIR SINE MIR 26 208 -54 25 0 0 0 chr10 11288130 11288155 -129028610 + AT_rich Low_complexity Low_complexity 1 25 0 419 281 124 52 chr10 11288319 11288586 -129028179 + L2 LINE L2 1875 2160 -1154 239 183 83 17 chr10 11288738 11288798 -129027967 + Charlie8 DNA MER1_type 1364 1427 -990 2722 100 6 0 chr10 11288808 11289159 -129027606 + THE1A LTR MaLR 1 353 -2 436 281 70 116 chr10 11289343 11289670 -129027095 - L2 LINE L2 -5 3267 2956 * 532 361 112 18 chr10 11289666 11290173 -129026592 - L2 LINE L2 -518 2796 2242 1558 154 64 7 chr10 11290542 11290822 -129025943 - AluJo SINE Alu -16 296 1 201 195 0 0 chr10 11291608 11291649 -129025116 + GA-rich Low_complexity Low_complexity 2 42 0 474 267 126 0 chr10 11292628 11292763 -129024002 - MIR SINE MIR -35 227 76 464 126 27 18 chr10 11292810 11292921 -129023844 + (TAGA)n Simple_repeat Simple_repeat 3 114 0 2495 67 0 13 chr10 11294088 11294403 -129022362 - AluY SINE Alu 0 311 1 437 268 75 49 chr10 11294602 11294770 -129021995 + MIR3 SINE MIR 34 208 -35 229 230 69 35 chr10 11294829 11294916 -129021849 - MIR SINE MIR 0 262 173 262 356 29 0 chr10 11295129 11295233 -129021532 - MIR SINE MIR -111 151 45 1023 169 0 16 chr10 11295289 11295472 -129021293 + MER53 DNA DNA 10 189 0 270 0 0 0 chr10 11295992 11296022 -129020743 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3682 187 53 8 chr10 11296839 11297570 -129019195 + L1MB3 LINE L1 5418 6181 -2 226 315 33 43 chr10 11298243 11298335 -129018430 + MIR SINE MIR 33 123 -85 21 0 0 0 chr10 11299170 11299191 -129017574 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 11299424 11299445 -129017320 + AT_rich Low_complexity Low_complexity 1 21 0 248 191 0 21 chr10 11300534 11300581 -129016184 + L2 LINE L2 3256 3301 -12 2218 116 0 0 chr10 11300583 11300876 -129015889 + AluSx SINE Alu 1 293 -19 2151 119 0 0 chr10 11300879 11301172 -129015593 + AluSx SINE Alu 1 293 -19 186 43 0 0 chr10 11301175 11301198 -129015567 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 351 0 0 0 chr10 11301907 11301946 -129014819 + (TG)n Simple_repeat Simple_repeat 2 40 0 5898 107 7 1 chr10 11302527 11303359 -129013406 + L1PA13 LINE L1 5314 6150 -13 198 198 44 99 chr10 11303450 11303541 -129013224 + L3 LINE CR1 1425 1510 -67 369 189 0 14 chr10 11304057 11304131 -129012634 - AluJ/FRAM SINE Alu -14 288 216 588 231 0 0 chr10 11304147 11304264 -129012501 - FLAM_A SINE Alu -6 136 20 2209 117 0 0 chr10 11304277 11304576 -129012189 - AluSx SINE Alu -13 299 1 888 303 65 65 chr10 11304741 11305417 -129011348 - L2 LINE L2 -812 2502 1827 1949 124 22 0 chr10 11305527 11305828 -129010937 - AluY SINE Alu 0 307 1 2041 109 46 57 chr10 11305992 11306360 -129010405 + THE1B LTR MaLR 1 364 0 9729 198 58 51 chr10 11306703 11307289 -129009476 - L1MC2 LINE L1 -11 7756 7176 312 242 11 11 chr10 11307289 11307380 -129009385 - MLT1F1 LTR MaLR -442 125 35 9729 198 58 51 chr10 11307380 11307751 -129009014 - L1MC2 LINE L1 -591 7176 6809 2073 104 3 27 chr10 11307751 11308050 -129008715 + AluSg SINE Alu 1 292 -18 9729 198 58 51 chr10 11308050 11309571 -129007194 - L1MC2 LINE L1 -958 6809 5301 4396 60 2 5 chr10 11309571 11310138 -129006627 - L1PA8 LINE L1 -7 6165 5601 9729 198 58 51 chr10 11310138 11312653 -129004112 - L1MC2 LINE L1 -2466 5301 2544 343 333 40 27 chr10 11312777 11312927 -129003838 + L3 LINE CR1 1417 1568 -9 357 198 47 19 chr10 11314499 11314605 -129002160 + L1MA9 LINE L1 6185 6293 -19 180 305 134 0 chr10 11314890 11314972 -129001793 + MIR3 SINE MIR 111 203 -5 281 219 52 0 chr10 11316032 11316128 -129000637 + (TA)n Simple_repeat Simple_repeat 2 102 0 252 266 53 53 chr10 11316620 11316733 -129000032 + MER5A DNA MER1_type 66 178 -11 403 194 41 20 chr10 11316630 11316728 -129000037 - MER5B DNA MER1_type -62 116 17 240 182 55 0 chr10 11316886 11316941 -128999824 + CT-rich Low_complexity Low_complexity 1 58 0 1144 194 65 50 chr10 11317967 11318008 -128998757 - L1MC4 LINE L1 -6 8036 7997 2034 118 9 41 chr10 11318008 11318323 -128998442 + AluSx SINE Alu 1 305 -7 1144 194 65 50 chr10 11318323 11318621 -128998144 - L1MC4 LINE L1 -45 7997 7692 2158 100 0 32 chr10 11318754 11319063 -128997702 + AluSg SINE Alu 1 299 -11 578 331 139 26 chr10 11319064 11319517 -128997248 - LTR67 LTR ERVL -44 513 10 556 294 34 0 chr10 11319537 11319683 -128997082 - MIR SINE MIR 0 262 112 2263 114 0 3 chr10 11319689 11319996 -128996769 - AluSx SINE Alu -3 309 4 470 122 293 8 chr10 11320113 11320236 -128996529 + L1MC/D LINE L1 5568 5725 -634 4215 220 23 20 chr10 11320253 11321690 -128995075 + L1MD2 LINE L1 4905 6349 -10 1935 151 0 7 chr10 11321889 11322174 -128994591 - AluSx SINE Alu -29 283 1 208 122 0 122 chr10 11324653 11324702 -128992063 - L2 LINE L2 -3 3310 3268 197 329 49 12 chr10 11324752 11324834 -128991931 - L2 LINE L2 -8 3305 3221 463 330 39 17 chr10 11325525 11325758 -128991007 + L2 LINE L2 1503 1740 -1574 1280 281 85 60 chr10 11325759 11326502 -128990263 + L1MEc LINE L1 55 846 -5550 390 68 0 40 chr10 11326502 11326576 -128990189 + (TA)n Simple_repeat Simple_repeat 2 72 0 1280 281 85 60 chr10 11326576 11327123 -128989642 + L1MEc LINE L1 846 1378 -5018 261 288 55 0 chr10 11327157 11327230 -128989535 - MLT1H LTR MaLR -249 300 224 354 234 234 34 chr10 11327365 11327604 -128989161 + L2 LINE L2 3026 3312 -1 1412 200 80 47 chr10 11328772 11329261 -128987504 - Charlie1b DNA MER1_type -2 521 17 903 200 101 37 chr10 11329487 11329817 -128986948 - MER57A LTR ERV1 0 403 113 784 194 7 0 chr10 11329842 11329981 -128986784 - FRAM SINE Alu -39 137 1 1461 201 60 0 chr10 11329998 11330267 -128986498 - AluJb SINE Alu -27 285 1 947 299 65 37 chr10 11331077 11331612 -128985153 - MLT1F1 LTR MaLR -17 550 1 197 291 0 0 chr10 11332018 11332073 -128984692 - L2 LINE L2 -2814 500 446 210 184 0 0 chr10 11332143 11332181 -128984584 - MIR SINE MIR -75 187 150 452 255 0 10 chr10 11332323 11332425 -128984340 + MIR SINE MIR 48 148 -114 604 62 0 12 chr10 11332470 11332551 -128984214 + MADE1 DNA Mariner 1 80 0 1047 265 58 6 chr10 11332640 11332965 -128983800 + MER93a LTR ERV1 61 402 0 253 240 47 108 chr10 11333075 11333204 -128983561 + MIR3 SINE MIR 60 180 -28 1633 226 3 21 chr10 11333304 11333684 -128983081 - MLT1A2 LTR MaLR 0 374 2 2123 119 23 10 chr10 11335224 11335526 -128981239 + AluSx SINE Alu 2 307 -5 1770 117 140 0 chr10 11335568 11335833 -128980932 + AluSq SINE Alu 1 302 -11 1031 209 30 0 chr10 11335977 11336178 -128980587 + MER63A DNA MER1_type 4 210 0 762 268 119 35 chr10 11336993 11337541 -128979224 - MLT1G1 LTR MaLR 0 595 2 257 177 0 16 chr10 11337659 11337721 -128979044 + L1ME3A LINE L1 6109 6169 -1 2130 120 0 10 chr10 11338179 11338471 -128978294 + AluSg SINE Alu 5 293 -17 520 250 42 8 chr10 11338728 11338848 -128977917 + FLAM_A SINE Alu 1 124 -9 423 118 0 40 chr10 11340402 11340478 -128976287 + AluSc SINE Alu 9 81 -228 186 240 0 0 chr10 11340494 11340544 -128976221 + GA-rich Low_complexity Low_complexity 3 52 0 180 0 0 0 chr10 11341550 11341570 -128975195 + (CAA)n Simple_repeat Simple_repeat 2 21 0 22 70 0 0 chr10 11342096 11342139 -128974626 + AT_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr10 11342241 11342269 -128974496 + AT_rich Low_complexity Low_complexity 1 28 0 1647 133 13 74 chr10 11342922 11343231 -128973534 + AluJo SINE Alu 1 290 -22 23 0 0 0 chr10 11343617 11343640 -128973125 + AT_rich Low_complexity Low_complexity 1 23 0 182 128 26 0 chr10 11345753 11345792 -128970973 + (TG)n Simple_repeat Simple_repeat 1 40 0 1789 143 6 16 chr10 11346095 11346444 -128970321 - MER4A LTR ERV1 0 664 261 573 111 10 20 chr10 11346444 11346543 -128970222 - MER4A LTR ERV1 -566 98 1 195 100 0 0 chr10 11346682 11346712 -128970053 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 223 310 169 38 chr10 11348373 11348557 -128968208 - L3b LINE CR1 -6 1577 1370 183 314 78 20 chr10 11348889 11348991 -128967774 - L2 LINE L2 -4 3268 3161 303 296 30 30 chr10 11350038 11350268 -128966497 - HAL1b LINE L1 -646 702 473 22 80 0 0 chr10 11351659 11351709 -128965056 + AT_rich Low_complexity Low_complexity 1 50 0 308 121 35 0 chr10 11352646 11352704 -128964061 + MER116 DNA Mariner 21 80 0 638 196 0 12 chr10 11352768 11352931 -128963834 + CT-rich Low_complexity Low_complexity 2 162 0 2259 119 0 3 chr10 11353857 11354160 -128962605 + AluSg SINE Alu 3 304 -6 959 247 113 14 chr10 11354507 11354892 -128961873 - MLT1D LTR MaLR 0 505 17 22 0 0 0 chr10 11354962 11354984 -128961781 + AT_rich Low_complexity Low_complexity 1 22 0 362 152 0 13 chr10 11354999 11355078 -128961687 + CT-rich Low_complexity Low_complexity 3 80 0 1733 182 7 0 chr10 11355449 11355745 -128961020 + AluJo SINE Alu 1 298 -14 2275 106 3 3 chr10 11356663 11356966 -128959799 - AluSx SINE Alu -9 303 1 220 328 144 55 chr10 11357561 11357887 -128958878 + L2 LINE L2 2918 3272 0 2274 103 0 0 chr10 11359626 11359944 -128956821 + AluSq SINE Alu 1 318 0 418 302 83 29 chr10 11360342 11360547 -128956218 - MIR SINE MIR -14 248 33 421 314 16 37 chr10 11360602 11360837 -128955928 + MIR SINE MIR 3 228 -34 189 261 25 84 chr10 11362030 11362149 -128954616 - MIR SINE MIR -75 187 76 2838 138 26 5 chr10 11362433 11362852 -128953913 - MSTA LTR MaLR 0 428 1 487 268 158 22 chr10 11363895 11364078 -128952687 - MIR SINE MIR -27 235 28 1036 231 78 14 chr10 11364201 11364483 -128952282 + MLT1-int LTR MaLR 357 656 -715 420 238 16 33 chr10 11364530 11364652 -128952113 + L1MEc LINE L1 22 141 -6255 1801 262 20 22 chr10 11364675 11365168 -128951597 + L1MEc LINE L1 121 612 -5784 470 216 0 0 chr10 11365196 11365293 -128951472 + L1MEc LINE L1 2316 2412 -3984 1531 203 69 38 chr10 11365297 11365714 -128951051 + MLT1C LTR MaLR 6 435 -32 366 192 14 14 chr10 11365714 11365787 -128950978 - Tigger5 DNA MER2_type 0 2323 2251 305 218 0 0 chr10 11365756 11365811 -128950954 - Tigger5 DNA MER2_type -2268 55 1 * 4266 198 37 8 chr10 11365845 11366704 -128950061 + MLT1C-int LTR MaLR 1 884 -487 1506 207 25 13 chr10 11366888 11367202 -128949563 + MLT1C-int LTR MaLR 959 1276 -95 545 237 0 0 chr10 11367223 11367337 -128949428 + MLT1C LTR MaLR 353 466 -1 6872 226 74 81 chr10 11367340 11368358 -128948407 + L1MEc LINE L1 2380 3404 -2811 485 227 182 0 chr10 11368358 11368490 -128948275 - MER58C DNA MER1_type 0 215 60 2455 107 169 0 chr10 11368490 11368856 -128947909 - MSTA LTR MaLR 0 428 1 6872 226 74 81 chr10 11368856 11370476 -128946289 + L1MEc LINE L1 3402 5129 -1086 312 137 0 0 chr10 11372573 11372624 -128944141 + (TTCA)n Simple_repeat Simple_repeat 4 54 0 260 368 65 65 chr10 11374190 11374500 -128942265 + L2 LINE L2 2949 3258 -14 251 291 83 126 chr10 11374537 11374911 -128941854 + L2 LINE L2 2915 3272 0 182 299 184 23 chr10 11375446 11375533 -128941232 + MIR SINE MIR 47 147 -115 2133 119 0 25 chr10 11375658 11375976 -128940789 - AluSq SINE Alu -3 310 1 2746 124 3 0 chr10 11377435 11377798 -128938967 + THE1B LTR MaLR 1 364 0 270 56 0 0 chr10 11378620 11378656 -128938109 + (TG)n Simple_repeat Simple_repeat 2 37 0 1905 164 0 3 chr10 11379600 11379899 -128936866 + AluJo SINE Alu 3 300 -12 309 311 57 0 chr10 11379916 11380022 -128936743 + L2 LINE L2 3151 3262 -10 186 237 26 0 chr10 11381080 11381118 -128935647 - MIR SINE MIR -76 132 94 212 274 39 49 chr10 11381412 11381514 -128935251 + L2 LINE L2 2949 3049 -223 208 241 51 51 chr10 11382396 11382475 -128934290 + L2 LINE L2 2095 2173 -1141 1268 188 4 8 chr10 11384842 11385081 -128931684 + L1MB7 LINE L1 5431 5668 -516 43397 35 23 2 chr10 11385085 11391112 -128925653 + L1PA2 LINE L1 1 6155 0 1725 216 44 33 chr10 11391153 11391603 -128925162 + L1MB7 LINE L1 5652 6106 -78 383 98 0 0 chr10 11391632 11391683 -128925082 - MADE1 DNA Mariner -28 52 2 350 132 0 0 chr10 11391685 11391738 -128925027 + L1MB8 LINE L1 6120 6172 -6 337 298 71 89 chr10 11391755 11392037 -128924728 + L1ME3A LINE L1 5811 6087 -83 923 180 40 110 chr10 11394061 11394361 -128922404 + MLT1D LTR MaLR 82 360 -145 207 321 83 0 chr10 11394487 11394571 -128922194 - MIR SINE MIR -82 180 90 2048 213 68 41 chr10 11395262 11395824 -128920941 - L1ME2 LINE L1 -1 6163 5585 1016 214 77 114 chr10 11395940 11396397 -128920368 - LTR16A1 LTR ERVL -14 443 4 250 238 24 12 chr10 11399572 11399656 -128917109 + (TA)n Simple_repeat Simple_repeat 1 85 0 2894 10 0 0 chr10 11400808 11401119 -128915646 + AluY SINE Alu 1 311 0 241 185 19 19 chr10 11401171 11401225 -128915540 + (CA)n Simple_repeat Simple_repeat 1 54 0 348 253 140 7 chr10 11402371 11402521 -128914244 - L1ME1 LINE L1 -4 6162 5993 2030 147 7 0 chr10 11402903 11403203 -128913562 + AluSx SINE Alu 1 302 -10 218 349 8 39 chr10 11403392 11403521 -128913244 + MIR SINE MIR 79 203 -59 2222 113 3 0 chr10 11404127 11404429 -128912336 - AluSp SINE Alu -10 303 1 5397 189 27 67 chr10 11404654 11405116 -128911649 - L1MC1 LINE L1 -9 6604 6125 1774 193 10 0 chr10 11405116 11405421 -128911344 + AluJb SINE Alu 3 310 -2 5397 189 27 67 chr10 11405421 11405958 -128910807 - L1MC1 LINE L1 -488 6125 5568 2105 137 0 7 chr10 11405958 11406257 -128910508 - AluSx SINE Alu -15 297 1 5397 189 27 67 chr10 11406257 11407592 -128909173 - L1MC1 LINE L1 -1045 5568 4346 8837 189 71 50 chr10 11407592 11411094 -128905671 - L1MC1 LINE L1 -2824 3602 28 401 322 27 27 chr10 11411665 11411848 -128904917 + MER5A DNA MER1_type 3 185 -4 2189 129 0 0 chr10 11413508 11413817 -128902948 - AluSx SINE Alu -3 309 1 401 196 144 26 chr10 11413930 11414083 -128902682 - Charlie2 DNA MER1_type -147 2715 2545 435 83 0 0 chr10 11414359 11414419 -128902346 + (TATG)n Simple_repeat Simple_repeat 3 62 0 244 196 22 0 chr10 11414457 11414503 -128902262 - MER21A LTR ERV1 -203 728 682 * 1920 251 32 18 chr10 11414477 11415037 -128901728 - MER77 LTR ERV1 -7 598 56 1322 231 40 6 chr10 11415615 11415944 -128900821 - MER58B DNA MER1_type 0 341 2 1730 173 3 7 chr10 11418688 11418989 -128897776 + AluJb SINE Alu 1 300 -12 1959 151 47 16 chr10 11420688 11421052 -128895713 + THE1C LTR MaLR 1 375 0 1535 181 27 34 chr10 11422953 11423246 -128893519 + AluJo SINE Alu 1 291 -21 1849 158 137 11 chr10 11423318 11423698 -128893067 - MSTA LTR MaLR 0 428 1 187 268 71 93 chr10 11424756 11424825 -128891940 + MIR SINE MIR 2 71 -191 1982 145 7 3 chr10 11424825 11425121 -128891644 + AluSx SINE Alu 1 297 -15 187 268 71 93 chr10 11425121 11425234 -128891531 + MIR SINE MIR 71 180 -82 40283 34 26 2 chr10 11425234 11431226 -128885539 - L1PA3 LINE L1 -1 6154 12 1405 185 13 75 chr10 11431695 11432025 -128884740 - MLT1A1 LTR MaLR 0 365 61 1680 138 0 23 chr10 11432025 11432285 -128884480 - AluSx SINE Alu -22 290 37 1405 185 13 75 chr10 11432285 11432343 -128884422 - MLT1A1 LTR MaLR -304 61 1 219 360 13 39 chr10 11432543 11432696 -128884069 + MIR SINE MIR 84 232 -30 257 262 40 13 chr10 11433154 11433303 -128883462 + (TA)n Simple_repeat Simple_repeat 2 154 0 222 287 267 32 chr10 11433847 11434098 -128882667 - L2 LINE L2 -338 2976 2667 244 336 36 22 chr10 11434592 11434869 -128881896 + MER34 LTR ERV1 1 281 -261 242 298 68 48 chr10 11434881 11435133 -128881632 + MER34 LTR ERV1 257 513 -29 2016 137 0 3 chr10 11436826 11437111 -128879654 - AluSg SINE Alu -26 284 1 630 299 74 17 chr10 11437376 11437607 -128879158 - MIR SINE MIR 0 262 19 356 200 89 22 chr10 11437795 11437885 -128878880 + MER5B DNA MER1_type 80 175 -3 21 0 0 0 chr10 11438750 11438771 -128877994 + AT_rich Low_complexity Low_complexity 1 21 0 1511 211 10 0 chr10 11439136 11439425 -128877340 + AluJo SINE Alu 3 294 -18 21 0 0 0 chr10 11439590 11439611 -128877154 + AT_rich Low_complexity Low_complexity 1 21 0 391 317 8 24 chr10 11440906 11441029 -128875736 - MIR3 SINE MIR -75 133 13 560 333 68 24 chr10 11441662 11441956 -128874809 + L3 LINE CR1 1233 1539 -38 285 278 113 0 chr10 11442468 11442565 -128874200 - MIR3 SINE MIR -6 202 95 195 139 0 0 chr10 11443077 11443113 -128873652 + (CA)n Simple_repeat Simple_repeat 2 37 0 543 190 65 65 chr10 11445216 11445400 -128871365 - MER20 DNA MER1_type 0 219 36 2200 130 0 0 chr10 11445830 11446129 -128870636 + AluSx SINE Alu 4 302 -10 234 0 0 0 chr10 11446375 11446401 -128870364 + (A)n Simple_repeat Simple_repeat 1 26 0 651 315 245 20 chr10 11446542 11447636 -128869129 + L2 LINE L2 1945 3299 -14 2172 138 0 0 chr10 11447980 11448285 -128868480 + AluSx SINE Alu 1 305 -7 1873 157 17 0 chr10 11450491 11450785 -128865980 + AluJb SINE Alu 1 299 -13 21 0 0 0 chr10 11451729 11451750 -128865015 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr10 11452139 11452167 -128864598 + AT_rich Low_complexity Low_complexity 1 28 0 2381 92 0 0 chr10 11452569 11452872 -128863893 + AluSx SINE Alu 1 303 -9 1873 112 105 4 chr10 11453208 11453485 -128863280 - AluSg SINE Alu -5 305 1 1485 194 0 37 chr10 11453496 11453795 -128862970 - AluJo SINE Alu -24 288 1 596 250 127 42 chr10 11453868 11454080 -128862685 + MIR SINE MIR 30 259 -3 240 210 81 0 chr10 11454407 11454469 -128862296 + MIR SINE MIR 128 194 -68 21 57 0 0 chr10 11455816 11455851 -128860914 + AT_rich Low_complexity Low_complexity 1 35 0 1694 154 9 49 chr10 11456248 11456572 -128860193 + AluJo SINE Alu 1 311 -1 247 268 0 0 chr10 11458473 11458529 -128858236 + MIR SINE MIR 92 147 -61 252 184 0 0 chr10 11458558 11458607 -128858158 + AluSp SINE Alu 120 168 -135 2235 116 0 7 chr10 11458607 11458910 -128857855 + AluSg SINE Alu 7 307 -3 248 355 18 34 chr10 11459806 11459987 -128856778 + MIR3 SINE MIR 9 190 -72 29 0 0 0 chr10 11460049 11460078 -128856687 + AT_rich Low_complexity Low_complexity 1 29 0 1306 239 46 19 chr10 11460488 11460857 -128855908 - L1MDa LINE L1 -6127 413 35 2197 139 89 5 chr10 11461025 11461420 -128855345 - MSTA LTR MaLR 0 428 1 2454 84 0 0 chr10 11461722 11462033 -128854732 + AluY SINE Alu 1 311 0 271 328 151 63 chr10 11462103 11462385 -128854380 - L2 LINE L2 -2 3270 2953 2227 101 0 47 chr10 11462385 11462702 -128854063 + AluSg SINE Alu 1 302 -8 271 328 151 63 chr10 11462702 11462751 -128854014 - L2 LINE L2 -319 2953 2910 1170 149 19 37 chr10 11463802 11464016 -128852749 + AluSg/x SINE Alu 85 294 -18 2316 115 0 0 chr10 11464422 11464726 -128852039 + AluSx SINE Alu 1 304 -8 285 335 88 16 chr10 11464881 11465200 -128851565 + MLT1I LTR MaLR 18 359 -50 288 0 0 0 chr10 11465471 11465503 -128851262 + (CA)n Simple_repeat Simple_repeat 2 33 0 434 259 114 34 chr10 11466445 11466708 -128850057 + LTR43 LTR ERV1 187 470 -132 2367 99 0 0 chr10 11466748 11467051 -128849714 - AluSx SINE Alu -9 303 1 1996 145 34 26 chr10 11467742 11468094 -128848671 - THE1B LTR MaLR 0 364 10 1081 198 120 46 chr10 11468109 11468569 -128848196 - MER69 DNA AcHobo -23 2503 2010 * 1175 305 74 27 chr10 11468567 11469001 -128847764 - MER69 DNA AcHobo -658 568 105 439 268 9 0 chr10 11469001 11469113 -128847652 - MER81 DNA DNA 0 114 2 1175 305 74 27 chr10 11469113 11469193 -128847572 - MER69 DNA AcHobo -1121 105 30 186 311 106 26 chr10 11469887 11470038 -128846727 - L3b LINE CR1 -199 1384 1222 421 281 23 23 chr10 11470201 11470329 -128846436 + MIR3 SINE MIR 66 193 -15 419 51 0 17 chr10 11470579 11470638 -128846127 + (TTTC)n Simple_repeat Simple_repeat 3 60 0 273 169 0 0 chr10 11470793 11470852 -128845913 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 21 57 0 0 chr10 11471208 11471243 -128845522 + AT_rich Low_complexity Low_complexity 1 35 0 211 338 12 0 chr10 11472089 11472169 -128844596 + L2 LINE L2 2709 2789 -525 466 363 48 35 chr10 11472236 11472550 -128844215 + L1ME LINE L1 5501 5818 -303 1029 220 17 9 chr10 11472555 11472787 -128843978 + L1MC3 LINE L1 7137 7370 -415 295 129 177 0 chr10 11472791 11472853 -128843912 - L1MA9 LINE L1 -2 6310 6238 1238 167 26 0 chr10 11472854 11473087 -128843678 + L1MC3 LINE L1 7356 7594 -191 829 165 71 6 chr10 11473088 11473270 -128843495 + L1MC2 LINE L1 6138 6331 -13 207 232 18 0 chr10 11473382 11473438 -128843327 + (TA)n Simple_repeat Simple_repeat 2 58 0 1453 195 15 9 chr10 11473670 11473998 -128842767 - L1MD3 LINE L1 -13 7982 7653 * 2083 151 17 85 chr10 11473995 11474618 -128842147 - L1MA9 LINE L1 -704 5479 4885 * 3159 193 24 46 chr10 11474615 11475434 -128841331 + L1MA9 LINE L1 5474 6274 -38 2188 79 59 0 chr10 11475458 11475748 -128841017 + AluSc SINE Alu 1 307 -2 1875 195 95 21 chr10 11475748 11476307 -128840458 - L1MC4a LINE L1 -318 7490 6891 941 188 41 10 chr10 11476320 11476517 -128840248 + MER6B DNA MER2_type 8 210 0 1103 212 0 0 chr10 11476578 11476771 -128839994 + AluJo SINE Alu 5 197 -115 268 271 112 28 chr10 11477233 11477340 -128839425 - L2 LINE L2 0 3272 3157 195 69 0 0 chr10 11479341 11479370 -128837395 + (A)n Simple_repeat Simple_repeat 1 29 0 414 315 30 56 chr10 11481473 11481670 -128835095 - L2 LINE L2 -4 3309 3118 1443 78 0 21 chr10 11481948 11482139 -128834626 - AluY SINE Alu -26 285 99 2270 125 27 20 chr10 11482198 11482606 -128834159 + L1MA4A LINE L1 5890 6300 -3 513 285 114 63 chr10 11482639 11482694 -128834071 - L2 LINE L2 -574 2740 2689 2365 107 0 0 chr10 11482694 11483004 -128833761 + AluY SINE Alu 1 310 -1 513 285 114 63 chr10 11483004 11483394 -128833371 - L2 LINE L2 -625 2689 2272 523 275 91 6 chr10 11483725 11484078 -128832687 + L1ME4a LINE L1 5710 6092 -29 2330 109 0 0 chr10 11484229 11484532 -128832233 + AluSc SINE Alu 1 303 -6 221 262 16 16 chr10 11484686 11484747 -128832018 - MIR SINE MIR -5 257 197 2414 94 0 3 chr10 11486636 11486945 -128829820 + AluSc SINE Alu 1 308 -1 207 0 0 0 chr10 11487030 11487053 -128829712 + (A)n Simple_repeat Simple_repeat 1 23 0 435 249 57 11 chr10 11487215 11487392 -128829373 - MER112 DNA MER1_type -6 254 70 279 0 0 0 chr10 11487527 11487558 -128829207 + (TG)n Simple_repeat Simple_repeat 2 32 0 216 0 0 0 chr10 11488289 11488313 -128828452 + (T)n Simple_repeat Simple_repeat 1 24 0 1724 189 0 23 chr10 11488371 11488673 -128828092 - AluJo SINE Alu -11 301 7 28 91 0 0 chr10 11489001 11489078 -128827687 + AT_rich Low_complexity Low_complexity 1 77 0 327 302 146 30 chr10 11489087 11489355 -128827410 + L1ME3A LINE L1 5304 5602 -564 329 283 108 0 chr10 11489367 11489579 -128827186 + L1ME3A LINE L1 5651 5885 -236 195 42 0 0 chr10 11490262 11490286 -128826479 + (TG)n Simple_repeat Simple_repeat 1 24 0 212 210 32 16 chr10 11490491 11490553 -128826212 + (TG)n Simple_repeat Simple_repeat 2 64 0 404 292 73 7 chr10 11491259 11491396 -128825369 - L2 LINE L2 -6 3307 3162 262 255 49 0 chr10 11491972 11492074 -128824691 + (TAGA)n Simple_repeat Simple_repeat 3 109 0 1304 252 66 22 chr10 11492075 11492601 -128824164 - MLT2F LTR ERVL -60 603 9 288 293 61 77 chr10 11492624 11492805 -128823960 - L2 LINE L2 -188 3084 2907 554 299 57 30 chr10 11492815 11493037 -128823728 - MER90 LTR ERV1 -13 601 368 1612 162 114 11 chr10 11493037 11493388 -128823377 + MLT1B LTR MaLR 4 390 0 554 299 57 30 chr10 11493388 11493463 -128823302 - MER90 LTR ERV1 -246 368 296 1498 155 55 134 chr10 11493744 11494073 -128822692 + Charlie3 DNA MER1_type 37 2712 0 189 362 0 0 chr10 11494405 11494452 -128822313 + L2 LINE L2 3139 3185 -87 326 325 177 28 chr10 11494690 11495107 -128821658 - L2 LINE L2 -243 3029 2546 412 209 43 26 chr10 11495231 11495346 -128821419 + L1ME3A LINE L1 6053 6169 -1 200 290 21 11 chr10 11496415 11496508 -128820257 + MIR SINE MIR 60 153 -109 320 153 0 9 chr10 11496551 11496622 -128820143 + FAM SINE Alu 115 174 -1 2587 84 31 6 chr10 11497154 11497509 -128819256 + THE1B LTR MaLR 1 364 0 485 286 95 24 chr10 11498536 11498704 -128818061 - L2 LINE L2 0 3313 3134 980 188 0 0 chr10 11498754 11498914 -128817851 + FRAM SINE Alu 4 163 -3 2184 114 35 44 chr10 11501317 11501684 -128815081 - THE1B LTR MaLR 0 364 1 222 289 39 78 chr10 11501891 11502019 -128814746 + MIR SINE MIR 94 216 -46 217 261 90 27 chr10 11502878 11502989 -128813776 - MIR SINE MIR -110 152 35 321 89 0 0 chr10 11503701 11503746 -128813019 + (TG)n Simple_repeat Simple_repeat 2 46 0 382 65 32 0 chr10 11504529 11504591 -128812174 + (GA)n Simple_repeat Simple_repeat 2 65 0 321 68 0 0 chr10 11508601 11508645 -128808120 + (TG)n Simple_repeat Simple_repeat 1 44 0 346 208 87 54 chr10 11509763 11509912 -128806853 - MIR SINE MIR -28 234 81 23 0 0 0 chr10 11510733 11510756 -128806009 + AT_rich Low_complexity Low_complexity 1 23 0 196 261 43 0 chr10 11512132 11512178 -128804587 - L2 LINE L2 -20 3252 3205 210 246 18 18 chr10 11512486 11512543 -128804222 + GA-rich Low_complexity Low_complexity 1 57 0 203 260 0 0 chr10 11516037 11516087 -128800678 + (TATG)n Simple_repeat Simple_repeat 2 51 0 333 241 102 139 chr10 11516818 11517287 -128799478 - L1M2 LINE L1 -5842 1007 556 21 57 0 0 chr10 11517302 11517337 -128799428 + GC_rich Low_complexity Low_complexity 1 35 0 424 293 122 57 chr10 11517433 11518059 -128798706 - L1M2 LINE L1 -5446 1403 833 26 0 0 0 chr10 11520512 11520538 -128796227 + AT_rich Low_complexity Low_complexity 1 26 0 374 261 76 0 chr10 11520698 11520790 -128795975 - MIR3 SINE MIR -19 189 91 248 234 147 0 chr10 11520895 11520979 -128795786 - MIR SINE MIR -61 147 57 1877 134 14 0 chr10 11523572 11523849 -128792916 + AluSx SINE Alu 1 281 -31 252 59 0 0 chr10 11523857 11523891 -128792874 + (TAA)n Simple_repeat Simple_repeat 1 34 0 333 68 0 0 chr10 11524457 11524501 -128792264 + (TG)n Simple_repeat Simple_repeat 1 44 0 2183 156 24 24 chr10 11524532 11524905 -128791860 + THE1C LTR MaLR 3 375 0 190 121 30 30 chr10 11525852 11525885 -128790880 - L3 LINE CR1 -508 1069 1037 2451 90 0 3 chr10 11527656 11527967 -128788798 - AluSg SINE Alu 0 310 1 2031 129 27 7 chr10 11527967 11528262 -128788503 - AluSx SINE Alu -11 301 1 213 355 74 8 chr10 11529474 11529595 -128787170 - MIR SINE MIR -27 235 107 225 0 0 0 chr10 11531395 11531420 -128785345 + (A)n Simple_repeat Simple_repeat 1 25 0 473 217 0 11 chr10 11531584 11531676 -128785089 + FLAM_A SINE Alu 1 91 -51 2266 94 10 0 chr10 11532506 11532805 -128783960 - AluSp SINE Alu -11 302 1 471 254 25 8 chr10 11534209 11534327 -128782438 - MER94 DNA DNA -13 121 2 2504 121 31 11 chr10 11536296 11536652 -128780113 - THE1B LTR MaLR 0 364 2 22 0 0 0 chr10 11537089 11537111 -128779654 + AT_rich Low_complexity Low_complexity 1 22 0 272 257 14 14 chr10 11539846 11539916 -128776849 - L2 LINE L2 -1 3312 3243 21 89 0 0 chr10 11540034 11540090 -128776675 + AT_rich Low_complexity Low_complexity 1 56 0 1686 219 44 19 chr10 11540185 11540546 -128776219 - MLT1A2 LTR MaLR 0 374 5 2887 185 65 19 chr10 11541782 11542425 -128774340 - L1MB7 LINE L1 -31 6153 5481 214 267 129 30 chr10 11542451 11542552 -128774213 - MIR SINE MIR -67 141 31 1014 288 191 24 chr10 11542684 11543615 -128773150 + L2 LINE L2 2224 3308 -5 676 160 0 0 chr10 11544395 11544495 -128772270 - AluJo SINE Alu -15 297 198 741 201 0 15 chr10 11544511 11544645 -128772120 - AluJo SINE Alu -179 133 2 450 240 100 27 chr10 11544678 11544828 -128771937 + MIR SINE MIR 102 262 0 564 202 23 81 chr10 11545414 11545587 -128771178 - MER5A DNA MER1_type -26 163 1 213 237 0 34 chr10 11545605 11545664 -128771101 + L2 LINE L2 3246 3302 -11 321 252 19 10 chr10 11546615 11546718 -128770047 + MER103 DNA DNA 17 120 -46 189 244 0 0 chr10 11546749 11546790 -128769975 - MER5A DNA MER1_type -148 41 1 26 30 0 0 chr10 11548797 11548830 -128767935 + AT_rich Low_complexity Low_complexity 1 33 0 333 311 120 58 chr10 11550773 11551014 -128765751 - L2 LINE L2 0 3272 3017 979 169 25 129 chr10 11551135 11551460 -128765305 - AluY SINE Alu -10 301 11 2301 103 44 3 chr10 11552491 11552830 -128763935 - THE1B LTR MaLR -11 353 1 388 356 8 0 chr10 11553234 11553352 -128763413 - L2 LINE L2 -3 3269 3151 17354 54 12 0 chr10 11555506 11558865 -128757900 - L1PA6 LINE L1 -1 6153 2766 205 320 55 55 chr10 11563099 11563299 -128753466 + L2 LINE L2 3072 3271 -1 279 293 24 49 chr10 11564413 11564536 -128752229 + MER5A DNA MER1_type 7 126 -63 308 289 10 10 chr10 11564590 11564687 -128752078 - L2 LINE L2 -3 3269 3173 2139 114 3 13 chr10 11564928 11565255 -128751510 + AluSq SINE Alu 1 313 0 24 0 0 0 chr10 11565406 11565430 -128751335 + AT_rich Low_complexity Low_complexity 1 24 0 278 315 11 0 chr10 11565630 11565719 -128751046 + (TATATG)n Simple_repeat Simple_repeat 6 95 0 393 300 110 13 chr10 11566020 11566257 -128750508 + MIR SINE MIR 3 262 0 874 177 6 12 chr10 11568845 11569009 -128747756 - FRAM SINE Alu 0 166 4 1745 171 7 7 chr10 11569341 11569634 -128747131 + AluJo SINE Alu 1 293 -19 222 299 26 13 chr10 11569666 11569743 -128747022 - L2 LINE L2 -2 3311 3234 180 0 0 0 chr10 11570998 11571018 -128745747 + (GGCTG)n Simple_repeat Simple_repeat 3 22 0 2409 61 3 3 chr10 11571018 11571311 -128745454 + AluY SINE Alu 9 301 -10 21 0 0 0 chr10 11573188 11573209 -128743556 + AT_rich Low_complexity Low_complexity 1 21 0 2054 145 7 0 chr10 11573219 11573529 -128743236 + AluJb SINE Alu 1 312 0 279 0 0 0 chr10 11577451 11577482 -128739283 + (CA)n Simple_repeat Simple_repeat 2 32 0 2033 148 3 0 chr10 11577680 11577977 -128738788 - AluSx SINE Alu -14 298 1 230 355 100 0 chr10 11580914 11581024 -128735741 + L2 LINE L2 3147 3267 -5 360 276 112 45 chr10 11585006 11585274 -128731491 + L2 LINE L2 3028 3313 0 272 347 40 8 chr10 11586175 11586299 -128730466 + L2 LINE L2 3127 3254 -18 465 296 80 0 chr10 11588782 11588944 -128727821 - MIR3 SINE MIR -4 204 30 486 179 250 0 chr10 11589102 11589214 -128727551 - MER3 DNA MER1_type -46 163 24 190 294 0 15 chr10 11590206 11590274 -128726491 + L2 LINE L2 3239 3305 -8 180 162 27 0 chr10 11591486 11591523 -128725242 - MIR SINE MIR -114 148 111 181 307 200 0 chr10 11595381 11595456 -128721309 + MIR3 SINE MIR 111 200 -8 25 0 0 0 chr10 11595873 11595898 -128720867 + AT_rich Low_complexity Low_complexity 1 25 0 641 274 28 14 chr10 11596365 11596577 -128720188 - MIR SINE MIR -14 248 34 304 324 9 19 chr10 11597586 11597691 -128719074 + MIR SINE MIR 6 109 -153 235 333 0 0 chr10 11604427 11604490 -128712275 - L2 LINE L2 -24 3248 3186 199 296 0 0 chr10 11605206 11605260 -128711505 + MIR SINE MIR 200 253 -9 183 234 85 0 chr10 11607607 11607654 -128709111 - MIR SINE MIR -112 150 100 199 329 27 0 chr10 11608189 11608262 -128708503 - L2 LINE L2 -4 3268 3194 297 314 160 0 chr10 11608890 11609084 -128707681 + MIR SINE MIR 2 226 -36 514 308 23 90 chr10 11609267 11609475 -128707290 - MIR SINE MIR 0 262 72 1951 135 4 0 chr10 11609475 11609777 -128706988 - AluSq SINE Alu 0 303 1 514 308 23 90 chr10 11609777 11609832 -128706933 - MIR SINE MIR -190 72 15 206 300 67 0 chr10 11609974 11610034 -128706731 + L2 LINE L2 3200 3263 -9 208 294 166 25 chr10 11611383 11611546 -128705219 + L2 LINE L2 2409 2594 -720 731 239 0 0 chr10 11611561 11611577 -128705188 - L1MA10 LINE L1 -1 6333 6318 8890 234 67 58 chr10 11611577 11613782 -128702983 - L1ME1 LINE L1 -8 6227 4045 1003 187 0 0 chr10 11613782 11613948 -128702817 - FRAM SINE Alu -12 164 1 8890 234 67 58 chr10 11613948 11614040 -128702725 - L1ME1 LINE L1 -2190 4045 3955 2121 110 4 0 chr10 11614040 11614321 -128702444 - AluSp SINE Alu -31 282 1 8890 234 67 58 chr10 11614321 11615225 -128701540 - L1ME1 LINE L1 -2280 3955 3061 1289 161 63 5 chr10 11615225 11615448 -128701317 + MER46A DNA MER2_type 1 236 0 8890 234 67 58 chr10 11615448 11616724 -128700041 - L1ME1 LINE L1 -3174 3061 1555 2278 91 3 0 chr10 11616724 11617010 -128699755 - AluSp SINE Alu -24 289 3 8890 234 67 58 chr10 11617010 11617698 -128699067 - L1ME1 LINE L1 -4680 1555 875 484 255 215 10 chr10 11617679 11617879 -128698886 - L1ME1 LINE L1 -5766 630 390 * 756 236 31 24 chr10 11617865 11618122 -128698643 - L1MEc LINE L1 -3814 2438 2183 434 240 164 0 chr10 11618144 11618290 -128698475 - L1ME1 LINE L1 -6013 383 214 200 422 104 6 chr10 11618688 11618861 -128697904 + L2 LINE L2 3065 3254 -18 243 0 0 0 chr10 11619383 11619410 -128697355 + (A)n Simple_repeat Simple_repeat 1 27 0 921 209 15 5 chr10 11619419 11619625 -128697140 + L1MB3 LINE L1 5911 6118 -65 200 211 58 0 chr10 11619695 11619747 -128697018 + MIR SINE MIR 91 145 -117 2517 118 31 11 chr10 11621505 11621861 -128694904 - THE1B LTR MaLR 0 364 2 22 0 0 0 chr10 11622298 11622320 -128694445 + AT_rich Low_complexity Low_complexity 1 22 0 272 257 14 14 chr10 11625058 11625128 -128691637 - L2 LINE L2 -1 3312 3243 21 89 0 0 chr10 11625246 11625302 -128691463 + AT_rich Low_complexity Low_complexity 1 56 0 1706 216 44 19 chr10 11625397 11625758 -128691007 - MLT1A2 LTR MaLR 0 374 5 2903 184 65 19 chr10 11626994 11627637 -128689128 - L1MB7 LINE L1 -31 6153 5481 214 267 129 30 chr10 11627663 11627764 -128689001 - MIR SINE MIR -67 141 31 1004 289 191 24 chr10 11627896 11628827 -128687938 + L2 LINE L2 2224 3308 -5 676 160 0 0 chr10 11629608 11629708 -128687057 - AluJo SINE Alu -15 297 198 741 201 0 15 chr10 11629724 11629858 -128686907 - AluJo SINE Alu -179 133 2 450 240 100 27 chr10 11629891 11630041 -128686724 + MIR SINE MIR 102 262 0 582 196 23 81 chr10 11630630 11630803 -128685962 - MER5A DNA MER1_type -26 163 1 213 237 0 34 chr10 11630821 11630880 -128685885 + L2 LINE L2 3246 3302 -11 321 252 19 10 chr10 11631831 11631934 -128684831 + MER103 DNA DNA 17 120 -46 189 244 0 0 chr10 11631965 11632006 -128684759 - MER5A DNA MER1_type -148 41 1 216 0 0 0 chr10 11634015 11634039 -128682726 + (A)n Simple_repeat Simple_repeat 1 24 0 333 311 120 58 chr10 11635996 11636237 -128680528 - L2 LINE L2 0 3272 3017 942 173 25 130 chr10 11636358 11636682 -128680083 - AluY SINE Alu -11 300 11 2620 59 0 0 chr10 11638065 11638370 -128678395 - AluY SINE Alu -6 305 1 187 174 0 87 chr10 11638605 11638651 -128678114 + MIR SINE MIR 221 262 0 369 43 0 0 chr10 11638932 11638979 -128677786 + (TG)n Simple_repeat Simple_repeat 2 48 0 1931 132 17 0 chr10 11639183 11639471 -128677294 - AluSx SINE Alu -19 293 1 191 288 0 34 chr10 11640022 11640081 -128676684 + L3 LINE CR1 1513 1569 -8 2342 95 0 19 chr10 11642906 11643222 -128673543 - AluSx SINE Alu 0 312 3 252 0 0 0 chr10 11643226 11643254 -128673511 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1428 209 0 7 chr10 11643266 11643539 -128673226 - AluJo SINE Alu -41 271 1 190 308 67 29 chr10 11643541 11643645 -128673120 - MIR SINE MIR -119 143 36 13726 147 45 29 chr10 11645036 11646264 -128670501 + Tigger1 DNA MER2_type 1 1207 -1211 2074 113 3 7 chr10 11646264 11646555 -128670210 - AluSx SINE Alu -9 303 14 13726 147 45 29 chr10 11646555 11647703 -128669062 + Tigger1 DNA MER2_type 1207 2416 -2 180 259 0 35 chr10 11647900 11647958 -128668807 - MIR SINE MIR -2 260 205 280 330 19 28 chr10 11648215 11648321 -128668444 + MER5B DNA MER1_type 3 107 -71 600 247 79 82 chr10 11650129 11650646 -128666119 - L2 LINE L2 -70 3243 2722 372 308 81 19 chr10 11650779 11650990 -128665775 - MIR SINE MIR -25 237 14 431 304 38 22 chr10 11652183 11652329 -128664436 + MIR SINE MIR 8 154 -64 421 308 98 66 chr10 11652582 11652865 -128663900 - L2 LINE L2 -22 3291 3019 6155 190 82 26 chr10 11652865 11653018 -128663747 + Looper DNA T2_type 1 144 -1414 2486 70 0 0 chr10 11653018 11653316 -128663449 - AluY SINE Alu -13 298 1 6155 190 82 26 chr10 11653316 11654638 -128662127 + Looper DNA T2_type 144 1558 0 421 308 98 66 chr10 11654638 11654921 -128661844 - L2 LINE L2 -294 3019 2696 535 314 73 58 chr10 11654937 11655487 -128661278 - L2 LINE L2 -1005 2309 1752 581 208 52 32 chr10 11655762 11655916 -128660849 - MIR SINE MIR -59 203 47 265 214 57 14 chr10 11657992 11658062 -128658703 - MIR SINE MIR 0 262 190 475 296 123 6 chr10 11661398 11661560 -128655205 + MIR3 SINE MIR 6 186 -22 1965 133 91 28 chr10 11663844 11664197 -128652568 + THE1C LTR MaLR 1 375 0 487 234 168 24 chr10 11664517 11664684 -128652081 + MIR SINE MIR 16 206 -56 194 250 0 39 chr10 11664792 11664844 -128651921 + L2 LINE L2 3217 3266 -6 521 251 43 53 chr10 11666932 11667119 -128649646 + MIR3 SINE MIR 23 207 -1 485 327 75 9 chr10 11668142 11668356 -128648409 + MIR SINE MIR 13 240 -22 397 331 82 6 chr10 11669664 11669818 -128646947 - MIR3 SINE MIR -35 173 5 489 233 128 23 chr10 11669968 11670140 -128646625 - MIR SINE MIR -46 216 27 425 215 28 19 chr10 11670372 11670479 -128646286 + MIR SINE MIR 109 216 -46 288 0 0 0 chr10 11671035 11671067 -128645698 + (A)n Simple_repeat Simple_repeat 1 32 0 186 346 0 0 chr10 11672454 11672506 -128644259 - L2 LINE L2 -21 3292 3241 246 388 70 22 chr10 11672697 11673009 -128643756 - L2 LINE L2 -338 2976 2650 1277 252 88 39 chr10 11673130 11673714 -128643051 - MLT1G LTR MaLR -13 577 1 3125 145 21 15 chr10 11674134 11674657 -128642108 + L1PA16 LINE L1 5641 6166 0 425 287 0 0 chr10 11675042 11675157 -128641608 + L1ME LINE L1 5706 5820 -301 1316 223 97 5 chr10 11676248 11676629 -128640136 - LTR37B LTR ERV1 0 468 53 896 185 209 24 chr10 11676853 11677107 -128639658 - MER39 LTR ERV1 0 707 407 374 241 92 52 chr10 11677077 11677251 -128639514 - MER34 LTR ERV1 -295 247 67 * 27 29 0 0 chr10 11677844 11677878 -128638887 + AT_rich Low_complexity Low_complexity 1 34 0 189 74 0 0 chr10 11684341 11684368 -128632397 + (A)n Simple_repeat Simple_repeat 1 27 0 1926 129 0 11 chr10 11684375 11684701 -128632064 + AluSx SINE Alu 1 323 0 349 88 35 0 chr10 11684834 11684891 -128631874 - L1PB2 LINE L1 -2 6149 6091 640 316 53 32 chr10 11685519 11685896 -128630869 - L2 LINE L2 -780 2534 2150 190 312 233 20 chr10 11687252 11687505 -128629260 + L2 LINE L2 2450 2756 -558 187 263 35 35 chr10 11687717 11687774 -128628991 + L2 LINE L2 2992 3048 -224 180 0 0 0 chr10 11687944 11687964 -128628801 + (T)n Simple_repeat Simple_repeat 1 20 0 364 270 32 40 chr10 11687965 11688091 -128628674 + MIR SINE MIR 81 205 -57 1596 184 32 0 chr10 11688872 11689150 -128627615 + AluJb SINE Alu 8 294 -18 504 288 34 77 chr10 11689667 11689900 -128626865 + MIR SINE MIR 15 237 -25 2111 130 0 7 chr10 11690643 11690993 -128625772 - AluSx SINE Alu 0 312 1 201 230 22 37 chr10 11692238 11692373 -128624392 + CT-rich Low_complexity Low_complexity 1 133 0 296 185 0 37 chr10 11692459 11692567 -128624198 + CT-rich Low_complexity Low_complexity 2 105 0 493 254 136 18 chr10 11693108 11693387 -128623378 - L1M2 LINE L1 -732 5565 5254 255 316 76 41 chr10 11693904 11694075 -128622690 - MIR3 SINE MIR -14 194 18 1720 156 0 49 chr10 11694433 11694741 -128622024 + AluJo SINE Alu 1 293 -19 285 253 10 50 chr10 11699386 11699485 -128617280 + L2 LINE L2 3219 3313 0 871 305 28 0 chr10 11701311 11701560 -128615205 - MIR SINE MIR -5 257 2 258 298 164 0 chr10 11701694 11701798 -128614967 + MIR SINE MIR 34 154 -108 704 152 0 18 chr10 11702812 11702924 -128613841 - FLAM_C SINE Alu -32 111 2 275 305 38 23 chr10 11702988 11703113 -128613652 - MIR SINE MIR -51 157 39 289 252 96 26 chr10 11703276 11703391 -128613374 + MIR SINE MIR 24 146 -62 27 62 0 0 chr10 11704053 11704101 -128612664 + AT_rich Low_complexity Low_complexity 1 48 0 256 264 47 9 chr10 11704347 11704453 -128612312 - L1MB8 LINE L1 -12 6166 6057 196 289 0 40 chr10 11704548 11704624 -128612141 - L2 LINE L2 -1 3271 3199 386 258 77 33 chr10 11705944 11706126 -128610639 - L2 LINE L2 -5 3308 3119 1987 143 3 16 chr10 11707691 11708006 -128608759 - AluJo SINE Alu -1 311 1 2501 108 40 3 chr10 11708333 11708684 -128608081 - THE1B LTR MaLR 0 364 1 388 356 8 0 chr10 11709088 11709206 -128607559 - L2 LINE L2 -3 3269 3151 21493 54 9 0 chr10 11711358 11714715 -128602050 - L1PA6 LINE L1 -3 6151 2766 261 315 55 55 chr10 11718948 11719148 -128597617 + L2 LINE L2 3072 3271 -1 313 293 24 49 chr10 11720262 11720385 -128596380 + MER5A DNA MER1_type 7 126 -63 338 289 10 10 chr10 11720439 11720536 -128596229 - L2 LINE L2 -3 3269 3173 184 342 88 18 chr10 11720643 11720757 -128596008 - L2 LINE L2 -12 3301 3180 2117 114 3 13 chr10 11720777 11721104 -128595661 + AluSq SINE Alu 1 313 0 24 0 0 0 chr10 11721255 11721279 -128595486 + AT_rich Low_complexity Low_complexity 1 24 0 278 315 11 0 chr10 11721479 11721568 -128595197 + (TATATG)n Simple_repeat Simple_repeat 6 95 0 297 314 160 0 chr10 11721912 11722106 -128594659 + MIR SINE MIR 2 226 -36 514 308 23 90 chr10 11722289 11722497 -128594268 - MIR SINE MIR 0 262 72 1951 135 4 0 chr10 11722497 11722799 -128593966 - AluSq SINE Alu 0 303 1 514 308 23 90 chr10 11722799 11722854 -128593911 - MIR SINE MIR -190 72 15 206 300 67 0 chr10 11722996 11723056 -128593709 + L2 LINE L2 3200 3263 -9 208 294 166 25 chr10 11724405 11724568 -128592197 + L2 LINE L2 2409 2594 -720 731 239 0 0 chr10 11724583 11724599 -128592166 - L1MA10 LINE L1 -1 6333 6318 5253 241 61 8 chr10 11724599 11726804 -128589961 - L1ME1 LINE L1 -8 6227 3918 1018 181 0 0 chr10 11726804 11726970 -128589795 - FRAM SINE Alu -12 164 1 4650 242 83 39 chr10 11726971 11727062 -128589703 - L1ME1 LINE L1 -2294 3921 3835 2149 103 4 0 chr10 11727062 11727343 -128589422 - AluSp SINE Alu -31 282 1 4650 242 83 39 chr10 11727343 11728248 -128588517 - L1ME1 LINE L1 -2380 3835 2971 1289 161 63 5 chr10 11728248 11728471 -128588294 + MER46A DNA MER2_type 1 236 0 4650 242 83 39 chr10 11728471 11729748 -128587017 - L1ME1 LINE L1 -3244 2971 1532 2278 91 3 0 chr10 11729748 11730034 -128586731 - AluSp SINE Alu -24 289 3 4650 242 83 39 chr10 11730034 11730722 -128586043 - L1ME1 LINE L1 -4683 1532 875 484 255 215 10 chr10 11730703 11730903 -128585862 - L1ME1 LINE L1 -5766 630 390 * 760 236 31 24 chr10 11730889 11731146 -128585619 - L1MEc LINE L1 -3814 2438 2183 434 240 164 0 chr10 11731168 11731314 -128585451 - L1ME1 LINE L1 -6013 383 214 200 422 104 6 chr10 11731712 11731885 -128584880 + L2 LINE L2 3065 3254 -18 252 0 0 0 chr10 11732407 11732435 -128584330 + (A)n Simple_repeat Simple_repeat 1 28 0 921 209 15 5 chr10 11732444 11732650 -128584115 + L1MB3 LINE L1 5911 6118 -65 200 211 58 0 chr10 11732720 11732772 -128583993 + MIR SINE MIR 91 145 -117 501 285 55 30 chr10 11734372 11734537 -128582228 - MER5B DNA MER1_type -3 175 7 2403 93 0 0 chr10 11735692 11735994 -128580771 - AluSc SINE Alu -7 302 1 1411 154 75 19 chr10 11738010 11738277 -128578488 + AluJo SINE Alu 1 282 -30 207 69 0 0 chr10 11738280 11738309 -128578456 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 2219 77 0 11 chr10 11738309 11738727 -128578038 + AluSg SINE Alu 4 418 0 443 311 29 66 chr10 11742780 11743021 -128573744 - MLT1J2 LTR MaLR -118 332 101 459 0 0 0 chr10 11744347 11744398 -128572367 + (TC)n Simple_repeat Simple_repeat 2 52 0 189 0 0 0 chr10 11744397 11744418 -128572347 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 299 321 18 0 chr10 11745471 11745583 -128571182 - MER94 DNA DNA -19 115 2 3496 152 27 55 chr10 11749742 11750413 -128566352 - MER39B LTR ERV1 0 653 2 559 146 0 10 chr10 11752372 11752468 -128564297 + L1MA4A LINE L1 6209 6303 0 1474 204 7 14 chr10 11752523 11752817 -128563948 + AluJo SINE Alu 1 292 -20 393 158 0 0 chr10 11753282 11753383 -128563382 + (TG)n Simple_repeat Simple_repeat 2 102 0 189 0 0 0 chr10 11754264 11754285 -128562480 + (T)n Simple_repeat Simple_repeat 1 21 0 1679 167 17 10 chr10 11755528 11755821 -128560944 + AluJo SINE Alu 1 295 -17 467 341 42 0 chr10 11755951 11756118 -128560647 + MER91A DNA MER1_type 1 174 -22 302 282 0 13 chr10 11764325 11764403 -128552362 - L2 LINE L2 0 3313 3237 297 314 41 59 chr10 11768573 11768731 -128548034 - MIR SINE MIR -62 146 31 387 0 0 0 chr10 11768997 11769040 -128547725 + (CA)n Simple_repeat Simple_repeat 1 43 0 225 263 95 21 chr10 11770807 11770902 -128545863 - MIR SINE MIR -2 260 159 243 0 0 0 chr10 11771270 11771297 -128545468 + (A)n Simple_repeat Simple_repeat 1 27 0 393 263 39 58 chr10 11771568 11771724 -128545041 - MIR3 SINE MIR -35 173 21 733 178 33 44 chr10 11772210 11772331 -128544434 + MER5B DNA MER1_type 1 121 -57 2122 124 24 0 chr10 11772331 11772622 -128544143 - AluSx SINE Alu -14 298 1 733 178 33 44 chr10 11772622 11772680 -128544085 + MER5B DNA MER1_type 121 178 0 249 207 23 58 chr10 11772825 11772912 -128543853 + MER5A DNA MER1_type 31 114 -75 505 192 75 11 chr10 11772923 11773049 -128543716 + L1MA9 LINE L1 6152 6288 -3 970 128 19 162 chr10 11774533 11774799 -128541966 - LOR1-int LTR ERV1 -3623 4497 4270 2027 25 0 0 chr10 11774813 11775049 -128541716 - L1PA4 LINE L1 -2 6153 5918 275 336 52 19 chr10 11776176 11776387 -128540378 + L2 LINE L2 2105 2322 -992 233 281 0 16 chr10 11777097 11777161 -128539604 + L2 LINE L2 3209 3271 -1 2473 66 7 0 chr10 11777220 11777521 -128539244 + AluY SINE Alu 1 303 -8 334 325 57 6 chr10 11777752 11777909 -128538856 - MIR SINE MIR -52 210 46 203 152 22 0 chr10 11777941 11777987 -128538778 + A-rich Low_complexity Low_complexity 2 48 0 261 172 0 103 chr10 11779473 11779560 -128537205 + MER116 DNA Mariner 3 80 0 327 175 0 0 chr10 11780690 11780747 -128536018 - MADE1 DNA Mariner -23 57 1 189 0 0 0 chr10 11781993 11782014 -128534751 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1960 112 29 4 chr10 11782599 11782877 -128533888 + AluSq SINE Alu 6 290 -23 381 161 21 11 chr10 11783741 11783834 -128532931 + MIR SINE MIR 39 132 -130 2137 134 0 0 chr10 11784021 11784313 -128532452 - AluSx SINE Alu -20 292 1 2404 70 0 20 chr10 11787185 11787486 -128529279 + AluY SINE Alu 1 295 -16 218 345 121 18 chr10 11788704 11788869 -128527896 + MIR3 SINE MIR 4 185 -23 287 320 82 35 chr10 11789820 11790076 -128526689 + L2 LINE L2 2550 2817 -497 212 186 17 0 chr10 11791222 11791281 -128525484 + CT-rich Low_complexity Low_complexity 2 61 0 27 0 0 0 chr10 11791435 11791462 -128525303 + AT_rich Low_complexity Low_complexity 1 27 0 512 282 60 13 chr10 11791515 11791664 -128525101 - MIR SINE MIR -50 212 57 221 241 56 0 chr10 11791694 11791748 -128525017 - MIR SINE MIR -188 74 18 585 192 75 0 chr10 11793047 11793167 -128523598 + FLAM_A SINE Alu 8 136 -6 209 250 0 0 chr10 11793374 11793426 -128523339 - L2 LINE L2 -33 3280 3229 261 0 0 0 chr10 11794168 11794197 -128522568 + (T)n Simple_repeat Simple_repeat 1 29 0 472 257 28 110 chr10 11794499 11794717 -128522048 + MIR SINE MIR 46 245 -17 221 0 0 33 chr10 11796808 11796838 -128519927 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 216 235 0 0 chr10 11797775 11797843 -128518922 + CT-rich Low_complexity Low_complexity 1 68 0 298 336 22 0 chr10 11798663 11798797 -128517968 - MIR3 SINE MIR -52 156 20 365 179 64 0 chr10 11799067 11799145 -128517620 - Charlie5 DNA MER1_type -2503 109 27 21 0 0 0 chr10 11799471 11799492 -128517273 + AT_rich Low_complexity Low_complexity 1 21 0 192 97 0 0 chr10 11800414 11800445 -128516320 + (A)n Simple_repeat Simple_repeat 1 31 0 2029 100 4 0 chr10 11801801 11802070 -128514695 - AluSc SINE Alu -39 270 1 22 0 0 0 chr10 11804088 11804110 -128512655 + AT_rich Low_complexity Low_complexity 1 22 0 508 184 0 10 chr10 11805373 11805471 -128511294 + FLAM_A SINE Alu 35 131 -11 351 0 0 0 chr10 11806023 11806062 -128510703 + (T)n Simple_repeat Simple_repeat 1 39 0 22 0 0 0 chr10 11809062 11809084 -128507681 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr10 11809448 11809479 -128507286 + AT_rich Low_complexity Low_complexity 1 31 0 188 61 61 0 chr10 11810164 11810197 -128506568 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 27 0 0 0 chr10 11811469 11811496 -128505269 + AT_rich Low_complexity Low_complexity 1 27 0 838 311 135 39 chr10 11814940 11815478 -128501287 - L3 LINE CR1 -214 1363 761 189 0 0 0 chr10 11815478 11815499 -128501266 + (TG)n Simple_repeat Simple_repeat 2 22 0 838 311 135 39 chr10 11815499 11815552 -128501213 - L3 LINE CR1 -816 761 715 330 267 81 34 chr10 11815576 11815779 -128500986 - MIR SINE MIR -26 236 18 299 247 43 54 chr10 11815806 11815899 -128500866 + L2 LINE L2 3220 3311 -2 686 328 109 40 chr10 11815972 11816368 -128500397 - L3 LINE CR1 -1082 495 73 21 0 0 0 chr10 11816665 11816686 -128500079 + AT_rich Low_complexity Low_complexity 1 21 0 1987 155 3 18 chr10 11816962 11817304 -128499461 + MER1B DNA MER1_type 1 337 0 1908 133 0 37 chr10 11817473 11817796 -128498969 - AluSx SINE Alu -1 311 1 204 67 0 0 chr10 11873011 11873041 -128443724 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 31 0 0 0 chr10 11876750 11876781 -128439984 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr10 11877179 11877200 -128439565 + (ATTG)n Simple_repeat Simple_repeat 3 23 0 576 266 130 11 chr10 11881335 11881519 -128435246 + MIR SINE MIR 4 209 -53 449 248 50 8 chr10 11882448 11882569 -128434196 + L2 LINE L2 3136 3261 -11 205 302 94 19 chr10 11883249 11883355 -128433410 - L2 LINE L2 0 3313 3200 528 204 148 28 chr10 11884643 11884785 -128431980 + MIR SINE MIR 13 171 -91 186 231 0 92 chr10 11886286 11886351 -128430414 + L3 LINE CR1 809 867 -710 383 296 77 18 chr10 11887088 11887257 -128429508 - MIR SINE MIR -16 246 68 328 206 244 23 chr10 11888397 11888528 -128428237 + MER53 DNA DNA 23 182 -7 * 452 173 109 18 chr10 11888434 11888544 -128428221 - MER53 DNA DNA -69 120 1 1131 201 139 37 chr10 11888861 11889250 -128427515 - MER66A LTR ERV1 -50 445 97 1916 158 11 29 chr10 11889288 11889571 -128427194 - MER66A-int LTR ERV1 0 6676 6399 2358 95 7 0 chr10 11889571 11889867 -128426898 + AluSp SINE Alu 4 301 -12 1916 158 11 29 chr10 11889867 11889932 -128426833 - MER66A-int LTR ERV1 -277 6399 6334 957 180 71 38 chr10 11890026 11890237 -128426528 - MER66A-int LTR ERV1 -1848 4828 4611 462 194 78 10 chr10 11890325 11890428 -128426337 - MER4D LTR ERV1 -711 161 52 7932 188 95 67 chr10 11890428 11890795 -128425970 - MER66A-int LTR ERV1 -2239 4437 4082 2486 113 19 19 chr10 11890795 11891159 -128425606 - THE1B LTR MaLR 0 364 1 7932 188 95 67 chr10 11891159 11892839 -128423926 - MER66A-int LTR ERV1 -2594 4082 2333 7519 201 68 43 chr10 11892824 11893373 -128423392 - MER66A-int LTR ERV1 -4507 2169 1635 * 1716 171 20 7 chr10 11893373 11893666 -128423099 - AluJo SINE Alu -15 297 1 7519 201 68 43 chr10 11893666 11894533 -128422232 - MER66A-int LTR ERV1 -5041 1635 690 1663 172 59 0 chr10 11894533 11894806 -128421959 + AluSg SINE Alu 1 289 -21 7519 201 68 43 chr10 11894806 11895313 -128421452 - MER66A-int LTR ERV1 -5986 690 197 1437 182 93 77 chr10 11895489 11895956 -128420809 - MER66A LTR ERV1 0 478 97 240 250 0 0 chr10 11896181 11896233 -128420532 + MIR SINE MIR 72 123 -139 579 152 12 90 chr10 11896574 11896746 -128420019 + MER66A LTR ERV1 97 303 -251 378 42 0 0 chr10 11897152 11897200 -128419565 + (TG)n Simple_repeat Simple_repeat 2 49 0 2139 146 0 3 chr10 11897590 11897899 -128418866 - AluSx SINE Alu -4 308 1 199 323 62 21 chr10 11898041 11898137 -128418628 - L2 LINE L2 -15 3298 3199 26 0 0 0 chr10 11899086 11899112 -128417653 + AT_rich Low_complexity Low_complexity 1 26 0 773 188 0 7 chr10 11899373 11899517 -128417248 - MLT1D LTR MaLR 0 505 363 2270 116 0 0 chr10 11899722 11900023 -128416742 + AluSx SINE Alu 1 301 -11 247 163 0 20 chr10 11900065 11900114 -128416651 + L1MD1 LINE L1 5692 5739 -382 1667 165 62 24 chr10 11900128 11900419 -128416346 + AluJo SINE Alu 1 302 -10 514 287 126 18 chr10 11900748 11900971 -128415794 + MIR SINE MIR 16 262 0 248 298 134 72 chr10 11900975 11901237 -128415528 - L2 LINE L2 -349 2965 2688 1750 193 63 30 chr10 11901237 11901663 -128415102 + L1MD1 LINE L1 5803 6242 0 2138 179 6 6 chr10 11902055 11902418 -128414347 + MLT1A1 LTR MaLR 3 365 0 246 266 84 59 chr10 11903572 11903775 -128412990 + MLT1J LTR MaLR 201 408 -103 216 111 0 0 chr10 11903800 11903836 -128412929 + (GGAA)n Simple_repeat Simple_repeat 2 37 0 278 289 112 48 chr10 11903915 11903951 -128412814 + L1ME4a LINE L1 5700 5732 -389 2099 119 0 17 chr10 11903951 11904246 -128412519 + AluSx SINE Alu 1 290 -22 278 289 112 48 chr10 11904246 11904396 -128412369 + L1ME4a LINE L1 5732 5898 -223 1860 159 43 0 chr10 11904400 11904726 -128412039 - MER47A DNA MER2_type 0 366 27 236 188 101 14 chr10 11904807 11904876 -128411889 + L1ME4a LINE L1 5951 6025 -96 2273 115 0 3 chr10 11905814 11906118 -128410647 - AluSq SINE Alu -10 303 1 3891 150 20 83 chr10 11907000 11907083 -128409682 + LTR39 LTR ERV1 1 88 -695 2158 122 3 0 chr10 11907083 11907377 -128409388 + AluSx SINE Alu 1 295 -17 3891 150 20 83 chr10 11907377 11907770 -128408995 + LTR39 LTR ERV1 88 408 -375 2244 109 0 6 chr10 11907770 11908081 -128408684 - AluSx SINE Alu -3 309 1 3891 150 20 83 chr10 11908081 11908408 -128408357 + LTR39 LTR ERV1 408 754 -29 929 209 29 9 chr10 11910839 11911049 -128405716 + MER41B LTR ERV1 422 635 0 238 291 90 0 chr10 11911122 11911244 -128405521 - MIR SINE MIR -66 142 19 2535 113 53 5 chr10 11911403 11911818 -128404947 + LTR49 LTR ERV1 1 435 -160 775 168 81 23 chr10 11912209 11912382 -128404383 + LTR49 LTR ERV1 413 595 0 183 268 71 0 chr10 11912533 11912589 -128404176 - L2 LINE L2 -5 3308 3249 2243 116 0 3 chr10 11912717 11913018 -128403747 + AluSx SINE Alu 1 300 -12 1401 132 182 23 chr10 11913080 11913338 -128403427 + AluJb SINE Alu 2 300 -2 2360 121 0 0 chr10 11913986 11914299 -128402466 - AluSq SINE Alu 0 313 1 1662 171 3 39 chr10 11914301 11914610 -128402155 - AluJo SINE Alu -9 303 6 2265 131 0 0 chr10 11914780 11915092 -128401673 - AluSx SINE Alu 0 312 1 724 274 248 20 chr10 11915147 11915331 -128401434 + L2 LINE L2 2044 2185 -1129 1745 189 7 0 chr10 11915331 11915627 -128401138 - AluJo SINE Alu -14 298 1 724 274 248 20 chr10 11915627 11915755 -128401010 + L2 LINE L2 2185 2283 -1031 2025 148 3 0 chr10 11915755 11916052 -128400713 + AluSx SINE Alu 1 298 -14 724 274 248 20 chr10 11916052 11916238 -128400527 + L2 LINE L2 2283 2657 -657 227 204 92 168 chr10 11916287 11916483 -128400282 + L2 LINE L2 2889 3069 -244 353 250 59 52 chr10 11916515 11916651 -128400114 + MER63 DNA MER1_type 1 763 -73 289 259 16 127 chr10 11916691 11916880 -128399885 + L2 LINE L2 3106 3273 -40 405 158 0 0 chr10 11916931 11916988 -128399777 - FLAM_A SINE Alu -21 122 66 319 140 0 18 chr10 11917150 11917207 -128399558 - FLAM_A SINE Alu -71 61 6 716 233 61 17 chr10 11917208 11917388 -128399377 + MER58A DNA MER1_type 37 224 0 281 167 0 0 chr10 11917397 11917445 -128399320 + L2 LINE L2 3263 3310 -3 227 162 0 0 chr10 11917498 11917535 -128399230 - MLT1A1 LTR MaLR 0 365 329 1090 151 6 45 chr10 11917535 11917714 -128399051 + FAM SINE Alu 1 172 -13 1358 208 33 45 chr10 11917714 11918051 -128398714 - MLT1A1 LTR MaLR -32 333 1 380 292 116 13 chr10 11918267 11918438 -128398327 - MIR SINE MIR -43 165 2 196 291 50 92 chr10 11918735 11918876 -128397889 - MIR3 SINE MIR -71 137 3 2341 117 0 9 chr10 11918903 11919219 -128397546 - AluSq SINE Alu 0 313 1 416 213 11 21 chr10 11919430 11919524 -128397241 - MER5B DNA MER1_type -85 93 1 229 211 0 58 chr10 11919524 11919559 -128397206 - MIR3 SINE MIR -51 157 126 474 268 140 0 chr10 11919869 11920033 -128396732 + MIR SINE MIR 2 188 -74 305 349 0 0 chr10 11920135 11920244 -128396521 - MIR SINE MIR -69 139 31 2355 106 0 6 chr10 11920341 11920653 -128396112 - AluSg SINE Alu 0 310 1 1056 23 78 0 chr10 11921172 11921300 -128395465 - MER85 DNA T2_type -1 138 1 248 265 15 0 chr10 11921467 11921535 -128395230 + MIR SINE MIR 76 144 -64 233 306 54 18 chr10 11921804 11921915 -128394850 - L2 LINE L2 -509 2805 2691 393 244 0 0 chr10 11922771 11922849 -128393916 + MER21B LTR ERV1 13 90 -773 1803 216 91 93 chr10 11922871 11923108 -128393657 + MER21B LTR ERV1 19 255 -608 1464 200 11 0 chr10 11923108 11923373 -128393392 + AluJb SINE Alu 16 283 -29 1803 216 91 93 chr10 11923373 11923912 -128392853 + MER21B LTR ERV1 255 794 -69 255 315 130 22 chr10 11924079 11924263 -128392502 + L3 LINE CR1 1303 1506 -71 346 300 36 36 chr10 11924322 11924462 -128392303 + MIR3 SINE MIR 42 181 -27 1837 183 7 13 chr10 11924462 11924762 -128392003 - AluJb SINE Alu -14 298 1 1193 192 9 18 chr10 11926114 11926333 -128390432 - AluJo SINE Alu -95 217 1 1518 204 47 6 chr10 11926361 11926700 -128390065 - MLT1A1 LTR MaLR 0 365 13 2211 130 33 25 chr10 11927448 11927809 -128388956 - THE1B LTR MaLR 0 364 1 2221 115 7 0 chr10 11929240 11929536 -128387229 - AluSx SINE Alu -14 298 1 252 209 77 11 chr10 11930930 11931021 -128385744 + GA-rich Low_complexity Low_complexity 1 97 0 2273 118 0 3 chr10 11931057 11931371 -128385394 + AluSq SINE Alu 1 313 0 4057 143 9 6 chr10 11932383 11933034 -128383731 + MER39B LTR ERV1 1 653 0 2128 77 46 82 chr10 11933327 11933555 -128383210 + L1MA2 LINE L1 5927 6137 -167 2148 131 3 0 chr10 11933555 11933846 -128382919 + AluSx SINE Alu 1 292 -20 2128 77 46 82 chr10 11933846 11934009 -128382756 + L1MA2 LINE L1 6137 6304 0 2233 128 32 11 chr10 11934101 11934477 -128382288 - MLT1B LTR MaLR -4 386 3 1855 135 44 101 chr10 11934520 11934727 -128382038 - THE1B LTR MaLR 0 364 188 2344 119 0 0 chr10 11934727 11935039 -128381726 + AluSq SINE Alu 1 312 -1 1855 135 44 101 chr10 11935039 11935217 -128381548 - THE1B LTR MaLR -176 188 1 5155 102 10 0 chr10 11936226 11936938 -128379827 + LTR30 LTR ERV1 2 720 -2 1991 126 7 10 chr10 11936938 11937262 -128379503 + AluSx SINE Alu 10 332 0 214 167 0 0 chr10 11937465 11937501 -128379264 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 256 241 218 30 chr10 11938956 11939089 -128377676 + MIR3 SINE MIR 10 167 -41 316 224 17 60 chr10 11940726 11940842 -128375923 - L2 LINE L2 -177 3095 2985 532 227 81 86 chr10 11941135 11941366 -128375399 - L1MC5 LINE L1 -60 7901 7670 2256 118 0 0 chr10 11941366 11941662 -128375103 + AluSx SINE Alu 2 297 -15 532 227 81 86 chr10 11941662 11942366 -128374399 - L1MC5 LINE L1 -291 7670 6780 416 363 18 6 chr10 11942503 11942671 -128374094 + MIR SINE MIR 24 193 -69 379 385 0 6 chr10 11943336 11943573 -128373192 + (TG)n Simple_repeat Simple_repeat 1 235 0 2079 154 59 77 chr10 11944788 11945007 -128371758 + MER31A LTR ERV1 1 222 -263 3421 121 31 13 chr10 11945007 11945560 -128371205 + L1MA2 LINE L1 5741 6303 -1 2079 154 59 77 chr10 11945560 11945834 -128370931 + MER31A LTR ERV1 222 485 0 7926 21 0 0 chr10 11946009 11947127 -128369638 + L1PA3 LINE L1 5038 6155 0 1065 163 102 0 chr10 11948027 11948223 -128368542 - AluJo SINE Alu -10 302 87 214 184 20 0 chr10 11948328 11948377 -128368388 + GA-rich Low_complexity Low_complexity 1 50 0 745 149 51 93 chr10 11948664 11948739 -128368026 + ORSL DNA AcHobo 42 119 -156 1764 132 106 0 chr10 11948739 11949004 -128367761 - AluSx SINE Alu -19 293 1 745 149 51 93 chr10 11949004 11949142 -128367623 + ORSL DNA AcHobo 119 246 -29 709 249 24 6 chr10 11949176 11949341 -128367424 + MER5B DNA MER1_type 8 175 -3 2134 143 13 28 chr10 11949636 11949683 -128367082 - L1MB3 LINE L1 -28 6155 6109 2388 133 34 0 chr10 11949683 11950035 -128366730 + THE1B LTR MaLR 1 364 0 2134 143 13 28 chr10 11950035 11950380 -128366385 - L1MB3 LINE L1 -74 6109 5769 291 268 42 0 chr10 11950386 11950457 -128366308 + L2 LINE L2 3216 3289 -24 1803 195 0 0 chr10 11950981 11951278 -128365487 - AluJo SINE Alu -8 304 8 892 201 6 11 chr10 11951335 11951514 -128365251 - AluJo SINE Alu -91 221 44 201 209 47 0 chr10 11952370 11952413 -128364352 + (CATG)n Simple_repeat Simple_repeat 3 47 0 24 0 0 0 chr10 11952494 11952518 -128364247 + AT_rich Low_complexity Low_complexity 1 24 0 3422 176 39 41 chr10 11953185 11953804 -128362961 + L1 LINE L1 4513 5130 -1038 2171 133 0 0 chr10 11953804 11954119 -128362646 + AluSx SINE Alu 1 315 0 3422 176 39 41 chr10 11954119 11954416 -128362349 + L1 LINE L1 5130 5426 -742 300 235 0 29 chr10 11954418 11954486 -128362279 - L1ME LINE L1 -287 5834 5769 633 221 61 22 chr10 11954496 11954677 -128362088 + LTR41 LTR ERVL 1 188 -585 252 265 8 51 chr10 11955088 11955205 -128361560 + LTR41 LTR ERVL 656 767 -6 1176 100 0 0 chr10 11955404 11955554 -128361211 - AluSg/x SINE Alu -9 301 152 303 327 73 27 chr10 11955564 11955714 -128361051 - MIR SINE MIR -63 199 43 534 251 121 103 chr10 11956232 11956439 -128360326 + MLT1J LTR MaLR 6 208 -303 2475 86 3 0 chr10 11956439 11956740 -128360025 - AluSg SINE Alu -8 302 1 534 251 121 103 chr10 11956740 11957027 -128359738 + MLT1J LTR MaLR 208 509 -2 430 278 28 45 chr10 11957071 11957247 -128359518 + MIR SINE MIR 35 207 -55 366 234 170 18 chr10 11957679 11957850 -128358915 + MIR SINE MIR 44 240 -22 4162 156 17 57 chr10 11957855 11958171 -128358594 + L1MCa LINE L1 202 529 -5897 1662 151 80 37 chr10 11958171 11958218 -128358547 + MER47A DNA MER2_type 1 45 -2278 2309 112 0 13 chr10 11958218 11958532 -128358233 - AluSx SINE Alu -2 310 1 1662 151 80 37 chr10 11958532 11958835 -128357930 + MER47A DNA MER2_type 45 366 0 4162 156 17 57 chr10 11958835 11959296 -128357469 + L1MCa LINE L1 529 943 -5483 1933 117 32 58 chr10 11959296 11959604 -128357161 + AluSq SINE Alu 1 300 -13 4162 156 17 57 chr10 11959604 11959704 -128357061 + L1MCa LINE L1 943 1045 -5381 2266 166 29 45 chr10 11959698 11959913 -128356852 + L1MCa LINE L1 1713 1930 -4496 * 2217 117 0 13 chr10 11959913 11960212 -128356553 - AluSq SINE Alu -18 295 1 2266 166 29 45 chr10 11960212 11960228 -128356537 + L1MCa LINE L1 1930 1945 -4481 2224 112 7 3 chr10 11960228 11960522 -128356243 - AluSq SINE Alu -18 295 1 2266 166 29 45 chr10 11960522 11960777 -128355988 + L1MCa LINE L1 1945 2192 -4234 8077 240 33 18 chr10 11960781 11961025 -128355740 + L1MCa LINE L1 2278 2517 -3909 3254 142 19 0 chr10 11961025 11961540 -128355225 - L1PA16 LINE L1 0 6166 5642 8077 240 33 18 chr10 11961540 11963609 -128353156 + L1MCa LINE L1 2517 4639 -1787 1916 104 8 0 chr10 11963609 11963858 -128352907 + AluSg SINE Alu 46 296 -14 8077 240 33 18 chr10 11963858 11964142 -128352623 + L1MCa LINE L1 4639 4917 -1509 1727 173 22 0 chr10 11964151 11964428 -128352337 + AluJo SINE Alu 9 291 -21 189 94 0 0 chr10 11964429 11964461 -128352304 + (GGAA)n Simple_repeat Simple_repeat 4 35 0 679 287 83 63 chr10 11964550 11965328 -128351437 - L1MC5 LINE L1 -924 6884 6112 600 306 93 38 chr10 11965350 11965439 -128351326 - MER115 DNA AcHobo -9 684 601 2105 139 0 3 chr10 11965439 11965734 -128351031 - AluSx SINE Alu -18 294 1 600 306 93 38 chr10 11965734 11966108 -128350657 - MER115 DNA AcHobo -92 601 140 423 0 0 0 chr10 11966287 11966334 -128350431 + (CA)n Simple_repeat Simple_repeat 2 48 0 1085 184 14 0 chr10 11968053 11968260 -128348505 - Tigger1 DNA MER2_type 0 2418 2209 691 175 0 113 chr10 11968281 11968441 -128348324 - Tigger1 DNA MER2_type -2276 142 1 2194 105 9 6 chr10 11968451 11968782 -128347983 - THE1B LTR MaLR -30 427 1 337 265 32 91 chr10 11968914 11969133 -128347632 + MLT1L LTR MaLR 112 391 -194 1972 152 11 55 chr10 11969143 11969356 -128347409 - MLT1A1 LTR MaLR 0 365 175 2462 97 0 0 chr10 11969356 11969665 -128347100 - AluSx SINE Alu -3 309 1 1972 152 11 55 chr10 11969665 11969833 -128346932 - MLT1A1 LTR MaLR -190 175 1 2384 113 0 3 chr10 11970740 11971049 -128345716 - AluSx SINE Alu -4 308 1 419 177 0 0 chr10 11971560 11971639 -128345126 - LTR41 LTR ERVL -638 135 57 1383 210 66 17 chr10 11972503 11972851 -128343914 + MLT1A1 LTR MaLR 1 365 0 184 265 0 20 chr10 11974526 11974575 -128342190 - MIR SINE MIR -113 149 102 1782 186 0 17 chr10 11974586 11974881 -128341884 + AluJo SINE Alu 1 290 -22 962 185 6 12 chr10 11974893 11975055 -128341710 + AluJb SINE Alu 136 296 -16 2260 105 7 20 chr10 11975284 11975589 -128341176 - AluSg SINE Alu -9 301 1 1690 146 64 11 chr10 11975751 11976031 -128340734 + AluJo SINE Alu 1 295 -17 488 143 154 0 chr10 11976556 11976647 -128340118 + MLT1F LTR MaLR 438 542 0 618 221 70 47 chr10 11976654 11976867 -128339898 - LTR37B LTR ERV1 -53 415 198 461 276 76 0 chr10 11976982 11977127 -128339638 - MER20 DNA MER1_type -63 156 1 335 194 15 0 chr10 11977127 11977189 -128339576 - LTR37B LTR ERV1 -348 120 58 1418 162 164 55 chr10 11977190 11977573 -128339192 - MER61B LTR ERV1 0 425 1 292 286 0 0 chr10 11977589 11977666 -128339099 + MER34 LTR ERV1 3 79 -463 1728 202 139 92 chr10 11977927 11978651 -128338114 - LTR19C LTR ERV1 -15 764 7 359 293 49 24 chr10 11978716 11978839 -128337926 + MER34 LTR ERV1 388 513 -29 2198 120 3 0 chr10 11978882 11979183 -128337582 - AluSx SINE Alu -10 302 1 313 281 16 49 chr10 11980767 11980952 -128335813 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 * 321 319 25 12 chr10 11980929 11981092 -128335673 + (TGGA)n Simple_repeat Simple_repeat 2 166 0 2764 103 11 3 chr10 11981092 11981702 -128335063 - PABL_A LTR ERV1 0 660 1 275 275 28 21 chr10 11981734 11981876 -128334889 + (TAGA)n Simple_repeat Simple_repeat 4 146 0 3351 160 30 22 chr10 11982695 11983325 -128333440 + MER41B LTR ERV1 1 635 0 1582 169 17 7 chr10 11984079 11984381 -128332384 - MER47A DNA MER2_type -3 363 59 3078 176 121 37 chr10 11984381 11985157 -128331608 + MER21B LTR ERV1 20 860 -3 703 296 66 8 chr10 11985199 11985456 -128331309 - MER5C DNA MER1_type -51 273 2 281 212 144 68 chr10 11985510 11985642 -128331123 - MER103 DNA DNA -8 158 17 246 257 40 3 chr10 11986945 11987038 -128329727 + MLT1H1 LTR MaLR 180 278 -289 274 247 28 62 chr10 11987086 11987132 -128329633 + C-rich Low_complexity Low_complexity 2 48 -125 218 81 27 0 chr10 11987132 11987169 -128329596 + (CCCCAG)n Simple_repeat Simple_repeat 2 39 0 274 247 28 62 chr10 11987169 11987300 -128329465 + C-rich Low_complexity Low_complexity 48 173 0 370 294 143 0 chr10 11987800 11987919 -128328846 + MIR SINE MIR 121 256 -6 2012 133 6 19 chr10 11987920 11988235 -128328530 - AluJo SINE Alu 0 312 2 1086 290 104 14 chr10 11988267 11989147 -128327618 + L2 LINE L2 2328 3297 -16 506 66 0 13 chr10 11989147 11989223 -128327542 + (GGGA)n Simple_repeat Simple_repeat 3 77 0 409 291 24 16 chr10 11990969 11991096 -128325669 + MER5A DNA MER1_type 9 136 -53 253 279 59 59 chr10 11991712 11991848 -128324917 - L2 LINE L2 -479 2835 2700 2350 96 16 0 chr10 11991939 11992242 -128324523 - AluSx SINE Alu -4 308 1 1381 89 68 11 chr10 11993447 11993637 -128323128 - AluSc SINE Alu -9 300 100 421 255 71 33 chr10 11994693 11994877 -128321888 - L1MC4a LINE L1 -1910 5898 5708 850 110 0 0 chr10 11994884 11994993 -128321772 + AluSg/x SINE Alu 186 294 -16 1836 159 0 14 chr10 11995644 11995940 -128320825 + AluJo SINE Alu 1 292 -20 382 216 31 0 chr10 11995944 11996041 -128320724 - MER5B DNA MER1_type -78 100 1 1769 159 0 4 chr10 11996069 11996339 -128320426 - AluSx SINE Alu -43 269 1 215 235 147 0 chr10 11997135 11997203 -128319562 - MIR SINE MIR -65 197 120 * 353 181 36 36 chr10 11997202 11997285 -128319480 + L2 LINE L2 3190 3272 -41 332 279 66 8 chr10 11997401 11997523 -128319242 - MIR SINE MIR -57 151 23 191 340 63 48 chr10 11997751 11997957 -128318808 + L2 LINE L2 2278 2486 -828 3226 201 123 5 chr10 11997989 11999526 -128317239 + L1MB8 LINE L1 4369 6173 -5 867 269 67 0 chr10 11999540 11999763 -128317002 + MIR SINE MIR 24 261 -1 208 227 109 47 chr10 12000116 12000244 -128316521 + L2 LINE L2 2932 3067 -205 398 296 30 0 chr10 12000783 12000915 -128315850 - MER5B DNA MER1_type -16 162 27 2207 109 0 53 chr10 12001107 12001429 -128315336 + AluSx SINE Alu 1 305 -7 2310 88 0 0 chr10 12001962 12002246 -128314519 - AluSc SINE Alu -17 292 9 293 82 20 0 chr10 12003104 12003153 -128313612 + (TA)n Simple_repeat Simple_repeat 1 50 0 362 330 34 38 chr10 12006584 12006793 -128309972 - L2 LINE L2 -419 2895 2688 404 342 121 9 chr10 12006840 12007071 -128309694 - MIR SINE MIR -2 260 4 301 314 81 8 chr10 12007075 12007199 -128309566 - L2 LINE L2 -745 2569 2437 249 33 0 0 chr10 12008091 12008121 -128308644 + (CTG)n Simple_repeat Simple_repeat 1 30 0 298 265 250 8 chr10 12008716 12008848 -128307917 - L3 LINE CR1 -466 1111 948 401 292 174 14 chr10 12008902 12009121 -128307644 + MIR SINE MIR 9 262 0 1660 207 36 3 chr10 12009129 12009463 -128307302 - MER7A DNA MER2_type 0 346 4 382 345 121 10 chr10 12009493 12009699 -128307066 - L3 LINE CR1 -752 825 597 387 275 160 40 chr10 12009703 12009903 -128306862 + L1ME LINE L1 5272 5495 -2313 307 253 42 0 chr10 12009908 12010003 -128306762 + L1ME LINE L1 5617 5715 -406 491 351 98 21 chr10 12010438 12010774 -128305991 - L3 LINE CR1 -1080 497 136 2415 75 7 3 chr10 12013402 12013708 -128303057 + AluY SINE Alu 1 307 -4 5610 51 21 4 chr10 12013762 12014474 -128302291 + L1PA5 LINE L1 5430 6153 -1 300 212 150 22 chr10 12016087 12016239 -128300526 + MIR SINE MIR 6 154 -69 327 236 21 135 chr10 12017653 12017819 -128298946 + L1MC4 LINE L1 7016 7129 -913 2176 83 57 17 chr10 12017819 12018120 -128298645 + AluSp SINE Alu 1 313 0 327 236 21 135 chr10 12018120 12018286 -128298479 + L1MC4 LINE L1 7129 7312 -730 28 29 0 0 chr10 12018286 12018321 -128298444 + AT_rich Low_complexity Low_complexity 1 35 0 230 240 8 48 chr10 12018995 12019120 -128297645 + L1ME4a LINE L1 5963 6082 -39 2240 124 0 0 chr10 12019359 12019665 -128297100 - AluSx SINE Alu -6 306 1 587 319 151 34 chr10 12019683 12020427 -128296338 + L1MC/D LINE L1 3159 3989 -2157 1736 154 0 4 chr10 12021135 12021401 -128295364 + AluJb SINE Alu 19 283 -29 313 306 138 30 chr10 12021786 12022018 -128294747 + L1MC/D LINE L1 5305 5561 -2224 2356 100 0 0 chr10 12022060 12022369 -128294396 - AluY SINE Alu -2 309 1 295 276 198 9 chr10 12022669 12022785 -128293980 + MIR SINE MIR 123 260 -2 24 67 0 0 chr10 12022925 12022970 -128293795 + AT_rich Low_complexity Low_complexity 1 45 0 306 341 19 23 chr10 12023732 12023892 -128292873 + MIR SINE MIR 1 146 -62 274 250 20 20 chr10 12025143 12025243 -128291522 - L1ME LINE L1 -328 5793 5694 1301 150 73 7 chr10 12025351 12025624 -128291141 - L1MA8 LINE L1 -2 6289 5999 810 165 11 11 chr10 12025979 12026155 -128290610 + GA-rich Low_complexity Low_complexity 1 176 0 222 255 0 0 chr10 12026157 12026204 -128290561 + G-rich Low_complexity Low_complexity 1 47 0 206 287 11 23 chr10 12026323 12026410 -128290355 + GA-rich Low_complexity Low_complexity 4 89 0 1562 157 32 21 chr10 12031624 12031905 -128284860 + AluJo SINE Alu 1 284 -28 213 108 0 0 chr10 12034036 12034073 -128282692 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 21 100 0 0 chr10 12034381 12034451 -128282314 + AT_rich Low_complexity Low_complexity 1 70 0 4582 209 53 6 chr10 12034668 12035764 -128281001 + ERVL-C1 LTR ERVL 4611 5757 -7 1118 231 33 48 chr10 12035768 12036166 -128280599 + MLT2C1 LTR ERVL 6 397 0 4098 243 100 66 chr10 12036927 12037929 -128278836 - HAL1 LINE L1 -273 2234 1267 8211 53 7 1 chr10 12037929 12038930 -128277835 - LTR13 LTR ERVK 0 1007 1 4098 243 100 66 chr10 12038930 12040084 -128276681 - HAL1 LINE L1 -1240 1267 5 180 0 0 0 chr10 12040591 12040611 -128276154 + (T)n Simple_repeat Simple_repeat 1 20 0 2369 80 0 10 chr10 12040625 12040936 -128275829 + AluY SINE Alu 1 308 -3 441 75 0 0 chr10 12041373 12041440 -128275325 + AluSp/q SINE Alu 244 310 -3 26 30 0 0 chr10 12041851 12041884 -128274881 + AT_rich Low_complexity Low_complexity 1 33 0 2364 88 3 3 chr10 12041957 12042263 -128274502 + AluSg SINE Alu 1 306 -4 528 257 50 50 chr10 12042437 12042616 -128274149 + MIR SINE MIR 37 215 -47 1099 228 103 19 chr10 12043444 12043870 -128272895 + MLT1C LTR MaLR 6 467 0 345 219 0 27 chr10 12043907 12043980 -128272785 - L2 LINE L2 -1 3271 3201 2413 89 8 28 chr10 12044000 12044358 -128272407 + L1PA11 LINE L1 5824 6174 0 22 0 0 0 chr10 12044590 12044612 -128272153 + AT_rich Low_complexity Low_complexity 1 22 0 226 236 0 18 chr10 12045773 12045828 -128270937 + CT-rich Low_complexity Low_complexity 6 59 0 2517 60 0 3 chr10 12045978 12046280 -128270485 + AluY SINE Alu 1 301 -10 185 282 0 0 chr10 12047606 12047645 -128269120 - MIR SINE MIR -15 247 209 316 321 0 22 chr10 12047730 12047867 -128268898 - MIR SINE MIR -47 215 82 184 345 26 35 chr10 12048387 12048500 -128268265 - MIR SINE MIR -72 190 79 290 315 128 34 chr10 12048633 12048782 -128267983 - L2 LINE L2 0 3272 3110 663 267 58 33 chr10 12049284 12049524 -128267241 - MIR SINE MIR -10 252 7 241 336 45 9 chr10 12050098 12050208 -128266557 + MIR3 SINE MIR 65 178 -30 1717 151 23 33 chr10 12050359 12050663 -128266102 + AluJo SINE Alu 1 301 -11 276 226 87 52 chr10 12051615 12051730 -128265035 - MER103 DNA DNA -46 120 2 810 204 159 9 chr10 12051743 12051969 -128264796 - MIR SINE MIR 0 262 3 616 237 50 0 chr10 12052223 12052362 -128264403 - MIR SINE MIR -5 257 112 289 207 126 0 chr10 12052383 12052470 -128264295 + Charlie1a DNA MER1_type 59 156 -1299 1790 228 83 29 chr10 12052472 12053064 -128263701 + Charlie1a DNA MER1_type 125 748 -707 27 49 0 0 chr10 12053949 12053990 -128262775 + AT_rich Low_complexity Low_complexity 1 41 0 712 264 71 9 chr10 12054469 12054681 -128262084 + MIR SINE MIR 6 230 -32 649 152 45 23 chr10 12054801 12054933 -128261832 - FRAM SINE Alu 0 40 1 225 151 68 14 chr10 12054945 12055018 -128261747 - AluS SINE Alu -222 80 4 319 304 32 8 chr10 12055377 12055502 -128261263 + MER58B DNA MER1_type 212 339 -2 503 183 89 61 chr10 12055582 12055762 -128261003 + MER20 DNA MER1_type 1 185 -34 248 321 80 7 chr10 12055865 12056002 -128260763 - MIR3 SINE MIR -58 150 4 190 277 169 24 chr10 12057988 12058071 -128258694 - L3b LINE CR1 -14 1569 1475 * 358 271 0 0 chr10 12058049 12058134 -128258631 - MIR SINE MIR -113 149 65 23 33 0 0 chr10 12058961 12058991 -128257774 + AT_rich Low_complexity Low_complexity 1 30 0 853 206 37 5 chr10 12059595 12059784 -128256981 + MER3 DNA MER1_type 1 195 -14 948 64 0 8 chr10 12060152 12060277 -128256488 - AluY SINE Alu -13 298 175 324 259 52 9 chr10 12061398 12061514 -128255251 + L1M4 LINE L1 5228 5348 -798 2029 118 12 91 chr10 12062217 12062624 -128254141 - THE1C LTR MaLR 0 375 1 204 97 0 0 chr10 12063545 12063576 -128253189 + (CTG)n Simple_repeat Simple_repeat 3 33 0 321 304 39 0 chr10 12065112 12065214 -128251551 - MIR SINE MIR -109 153 48 220 302 127 78 chr10 12065477 12065570 -128251195 - L2 LINE L2 -477 2837 2750 1911 112 30 3 chr10 12065570 12065866 -128250899 - AluSc SINE Alu -5 304 1 220 302 127 78 chr10 12065866 12065977 -128250788 - L2 LINE L2 -564 2750 2623 586 254 102 25 chr10 12066028 12066264 -128250501 - MIR SINE MIR -4 258 5 736 115 19 0 chr10 12066432 12066536 -128250229 - AluSg/x SINE Alu -15 297 192 227 111 0 111 chr10 12067087 12067150 -128249615 + L1MC/D LINE L1 5737 5792 -2016 21 0 0 0 chr10 12067279 12067300 -128249465 + AT_rich Low_complexity Low_complexity 1 21 0 504 234 14 0 chr10 12067998 12068139 -128248626 + L1MC3 LINE L1 7643 7785 0 240 289 165 0 chr10 12069526 12069623 -128247142 + L2 LINE L2 3199 3311 -2 25 75 0 0 chr10 12069838 12069891 -128246874 + AT_rich Low_complexity Low_complexity 1 53 0 10837 39 3 0 chr10 12070517 12071826 -128244939 + L1P LINE L1 1598 2910 -3236 1471 170 74 51 chr10 12072204 12072540 -128244225 + MER2 DNA MER2_type 1 344 0 736 145 94 7 chr10 12073171 12073309 -128243456 - L1MC3 LINE L1 -1003 6782 6633 881 141 0 0 chr10 12073408 12073536 -128243229 + AluSg/x SINE Alu 174 301 -11 2433 104 0 0 chr10 12074613 12074921 -128241844 + AluSx SINE Alu 1 308 -4 242 284 134 8 chr10 12074952 12075086 -128241679 - L1M4 LINE L1 -1305 4841 4691 754 200 0 0 chr10 12075108 12075243 -128241522 - FLAM_A SINE Alu -1 141 7 373 209 85 102 chr10 12078751 12078928 -128237837 + MER5B DNA MER1_type 2 175 -3 4330 78 7 0 chr10 12079873 12080422 -128236343 - MER41A LTR ERV1 -1 553 1 468 99 0 0 chr10 12081307 12081378 -128235387 + (CA)n Simple_repeat Simple_repeat 2 72 0 421 163 75 0 chr10 12081381 12081461 -128235304 + MER53 DNA DNA 101 186 -3 2222 234 102 42 chr10 12081644 12082367 -128234398 + MER21B LTR ERV1 12 778 -85 291 330 10 0 chr10 12085471 12085568 -128231197 - L2 LINE L2 -498 2816 2719 6841 39 2 164 chr10 12086235 12087421 -128229344 + L1P LINE L1 3658 4652 -1494 22 70 0 0 chr10 12088009 12088052 -128228713 + AT_rich Low_complexity Low_complexity 1 43 0 707 166 47 72 chr10 12088702 12088895 -128227870 + MER53 DNA DNA 1 188 -1 22 35 0 0 chr10 12090805 12090834 -128225931 + AT_rich Low_complexity Low_complexity 1 29 0 470 279 99 64 chr10 12092191 12092503 -128224262 - L2 LINE L2 -62 3251 2929 499 106 0 0 chr10 12092503 12092569 -128224196 + Alu SINE Alu 2 67 -243 240 111 0 0 chr10 12093282 12093318 -128223447 + (CAT)n Simple_repeat Simple_repeat 1 36 0 363 254 49 16 chr10 12093756 12093878 -128222887 - MIR3 SINE MIR -30 178 53 193 310 155 7 chr10 12094023 12094178 -128222587 - MER5B DNA MER1_type 0 178 1 206 296 46 37 chr10 12095894 12096002 -128220763 + MIR SINE MIR 30 138 -124 556 320 101 24 chr10 12097370 12097785 -128218980 + L1ME LINE L1 5264 5710 -411 259 310 14 125 chr10 12097811 12098108 -128218657 - L2 LINE L2 -22 3250 2987 251 191 16 0 chr10 12098474 12098537 -128218228 + G-rich Low_complexity Low_complexity 5 68 0 318 297 187 48 chr10 12099352 12099770 -128216995 + L2 LINE L2 1889 2364 -950 2221 189 62 25 chr10 12099798 12100284 -128216481 + MLT1D LTR MaLR 1 504 -1 1007 211 59 157 chr10 12101107 12101899 -128214866 - L1MC5 LINE L1 -199 7762 7048 184 305 17 0 chr10 12103052 12103111 -128213654 + MIR SINE MIR 93 152 -110 1301 156 71 212 chr10 12103140 12103706 -128213059 + MLT1E2 LTR MaLR 16 622 -4 1094 150 18 53 chr10 12107144 12107371 -128209394 - MER20 DNA MER1_type 0 219 1 464 260 164 6 chr10 12108168 12108345 -128208420 + MIR SINE MIR 46 250 -12 331 264 75 0 chr10 12108387 12108493 -128208272 - L2 LINE L2 -16 3256 3143 611 217 6 26 chr10 12108675 12109023 -128207742 + (CACCAT)n Simple_repeat Simple_repeat 1 341 0 286 261 188 0 chr10 12109148 12109286 -128207479 + MER5A DNA MER1_type 26 189 0 1847 129 4 7 chr10 12111733 12112004 -128204761 + AluSx SINE Alu 40 309 -3 275 219 41 27 chr10 12112065 12112138 -128204627 - Charlie8 DNA MER1_type 0 2417 2344 364 264 68 61 chr10 12112206 12112369 -128204396 - Charlie8 DNA MER1_type -2187 230 67 861 185 28 6 chr10 12112460 12112638 -128204127 + MER5A DNA MER1_type 1 182 -7 1239 189 52 8 chr10 12112654 12112903 -128203862 + MER58B DNA MER1_type 79 338 -3 322 130 0 0 chr10 12114415 12114461 -128202304 - MER53 DNA DNA -5 184 139 446 220 64 0 chr10 12114527 12114636 -128202129 - MER53 DNA DNA -73 116 1 2370 107 0 19 chr10 12115081 12115399 -128201366 + AluSx SINE Alu 1 312 0 299 311 20 33 chr10 12118935 12119086 -128197679 - L2 LINE L2 -856 2458 2310 337 302 133 31 chr10 12119714 12120105 -128196660 + L2 LINE L2 2829 3259 -54 22 0 0 0 chr10 12121850 12121872 -128194893 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr10 12121961 12121981 -128194784 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 1995 125 7 0 chr10 12121983 12122283 -128194482 - AluSq SINE Alu 0 302 1 531 197 0 141 chr10 12122981 12123125 -128193640 + L1MC5 LINE L1 7753 7863 -98 216 0 0 0 chr10 12123125 12123149 -128193616 + (AATAG)n Simple_repeat Simple_repeat 2 25 0 531 197 0 141 chr10 12123149 12123202 -128193563 + L1MC5 LINE L1 7863 7922 -39 599 272 25 0 chr10 12123443 12123605 -128193160 - MER97b DNA MER1_type? -874 179 14 517 321 148 35 chr10 12123808 12124287 -128192478 - L3 LINE CR1 -323 1254 722 848 256 47 49 chr10 12124307 12124612 -128192153 + L1ME LINE L1 5474 5779 -342 1654 159 0 34 chr10 12124612 12124908 -128191857 + AluJo SINE Alu 20 305 -7 848 256 47 49 chr10 12124908 12124946 -128191819 + L1ME LINE L1 5779 5816 -305 246 333 19 0 chr10 12124970 12125078 -128191687 + L1ME LINE L1 141 250 -5955 307 223 58 58 chr10 12125486 12125589 -128191176 + L1ME LINE L1 786 888 -5508 380 290 129 46 chr10 12125590 12126025 -128190740 + L1ME LINE L1 866 1336 -4869 304 256 72 8 chr10 12126251 12126376 -128190389 + L1M1 LINE L1 2890 3022 -4543 296 276 26 0 chr10 12126685 12126761 -128190004 - L2 LINE L2 -2 3311 3234 327 313 40 0 chr10 12126765 12126895 -128189870 - MIR SINE MIR -63 145 5 2227 101 13 7 chr10 12126987 12127285 -128189480 - AluSx SINE Alu -12 300 1 1669 171 3 39 chr10 12127287 12127596 -128189169 - AluJo SINE Alu -9 303 6 2268 131 0 0 chr10 12127766 12128078 -128188687 - AluSx SINE Alu 0 312 1 609 274 248 20 chr10 12128133 12128317 -128188448 + L2 LINE L2 2044 2185 -1129 1755 189 7 0 chr10 12128317 12128613 -128188152 - AluJo SINE Alu -14 298 1 609 274 248 20 chr10 12128613 12128741 -128188024 + L2 LINE L2 2185 2283 -1031 2034 148 3 0 chr10 12128741 12129038 -128187727 + AluSx SINE Alu 1 298 -14 609 274 248 20 chr10 12129038 12129224 -128187541 + L2 LINE L2 2283 2657 -657 187 207 86 167 chr10 12129273 12129471 -128187294 + L2 LINE L2 2889 3070 -243 376 250 59 52 chr10 12129501 12129637 -128187128 + MER63 DNA MER1_type 1 763 -73 225 240 17 137 chr10 12129677 12129852 -128186913 + L2 LINE L2 3106 3259 -54 226 280 20 0 chr10 12129854 12129904 -128186861 + MER58A DNA MER1_type 1 51 -173 389 168 0 10 chr10 12129911 12129979 -128186786 - FLAM_A SINE Alu -11 122 66 329 140 0 18 chr10 12130136 12130193 -128186572 - FLAM_A SINE Alu -71 61 6 740 250 44 0 chr10 12130194 12130374 -128186391 + MER58A DNA MER1_type 37 224 0 268 167 0 0 chr10 12130383 12130431 -128186334 + L2 LINE L2 3263 3310 -3 228 162 0 0 chr10 12130484 12130521 -128186244 - MLT1A1 LTR MaLR 0 365 329 1094 151 6 45 chr10 12130521 12130700 -128186065 + FAM SINE Alu 1 172 -13 1403 205 33 45 chr10 12130700 12131037 -128185728 - MLT1A1 LTR MaLR -32 333 1 352 327 39 6 chr10 12131253 12131409 -128185356 - MIR SINE MIR -79 183 23 2349 117 0 9 chr10 12131889 12132205 -128184560 - AluSq SINE Alu 0 313 1 390 213 11 21 chr10 12132416 12132510 -128184255 - MER5B DNA MER1_type -85 93 1 213 211 0 58 chr10 12132510 12132545 -128184220 - MIR3 SINE MIR -51 157 126 438 254 50 40 chr10 12132869 12133019 -128183746 + MIR SINE MIR 39 188 -49 289 349 0 0 chr10 12133121 12133230 -128183535 - MIR SINE MIR -69 139 31 2366 106 0 6 chr10 12133327 12133639 -128183126 - AluSg SINE Alu 0 310 1 1001 23 78 0 chr10 12134158 12134286 -128182479 - MER85 DNA T2_type -1 138 1 233 265 15 0 chr10 12134453 12134521 -128182244 + MIR SINE MIR 76 144 -64 221 306 54 18 chr10 12134790 12134901 -128181864 - L2 LINE L2 -509 2805 2691 402 244 0 0 chr10 12135779 12135857 -128180908 + MER21B LTR ERV1 13 90 -773 1934 211 94 95 chr10 12135879 12136116 -128180649 + MER21B LTR ERV1 19 255 -608 1493 196 11 0 chr10 12136116 12136381 -128180384 + AluJb SINE Alu 16 283 -29 1934 211 94 95 chr10 12136381 12136920 -128179845 + MER21B LTR ERV1 255 794 -69 234 359 114 5 chr10 12137087 12137271 -128179494 + L3 LINE CR1 1303 1506 -71 322 300 36 36 chr10 12137330 12137470 -128179295 + MIR3 SINE MIR 42 181 -27 1829 179 7 17 chr10 12137470 12137771 -128178994 - AluJb SINE Alu -14 298 1 1196 192 9 18 chr10 12139123 12139342 -128177423 - AluJo SINE Alu -95 217 1 1555 206 44 3 chr10 12139370 12139709 -128177056 - MLT1A1 LTR MaLR 0 365 13 2076 130 33 25 chr10 12140457 12140818 -128175947 - THE1B LTR MaLR 0 364 1 2227 115 7 0 chr10 12142249 12142545 -128174220 - AluSx SINE Alu -14 298 1 252 209 77 11 chr10 12143939 12144030 -128172735 + GA-rich Low_complexity Low_complexity 1 97 0 1425 105 5 5 chr10 12194097 12194306 -128122459 - AluSx SINE Alu -103 209 1 3818 148 32 22 chr10 12194306 12194886 -128121879 + Tigger1 DNA MER2_type 2 592 -1826 1984 125 24 3 chr10 12194886 12195175 -128121590 + AluSx SINE Alu 1 295 -17 3818 148 32 22 chr10 12195175 12195276 -128121489 + Tigger1 DNA MER2_type 592 690 -1728 322 225 84 0 chr10 12195265 12195336 -128121429 + Tigger1 DNA MER2_type 2121 2197 -221 * 965 136 7 0 chr10 12195452 12195606 -128121159 + AluSg/x SINE Alu 142 296 -16 2139 103 3 7 chr10 12195637 12195939 -128120826 + AluSp SINE Alu 1 301 -12 212 255 186 20 chr10 12196377 12196479 -128120286 - MIR SINE MIR -123 139 21 241 218 139 10 chr10 12196538 12196639 -128120126 - HAL1b LINE L1 -442 906 793 1347 126 5 19 chr10 12196872 12197087 -128119678 - AluSx SINE Alu -100 212 1 1726 179 25 23 chr10 12197752 12198105 -128118660 + MLT1A1 LTR MaLR 11 364 -1 2177 112 0 0 chr10 12199653 12199957 -128116808 - AluSx SINE Alu -8 304 1 1493 184 22 7 chr10 12199967 12200244 -128116521 - AluJo SINE Alu -31 281 1 1813 123 68 3 chr10 12200870 12201163 -128115602 + AluJo SINE Alu 1 312 0 225 218 18 18 chr10 12201660 12201715 -128115050 - MLT1K LTR MaLR -1 587 533 1583 128 88 34 chr10 12201844 12202140 -128114625 - AluJb SINE Alu 0 312 1 1423 269 62 40 chr10 12202305 12202825 -128113940 + MER69 DNA AcHobo 1 531 -1995 672 191 0 37 chr10 12202836 12202972 -128113793 + FLAM_C SINE Alu 6 136 -7 571 102 10 10 chr10 12202977 12203075 -128113690 + (GGAA)n Simple_repeat Simple_repeat 4 101 0 585 258 52 16 chr10 12203083 12203277 -128113488 + MER69 DNA AcHobo 601 801 -1725 2398 47 0 10 chr10 12204818 12205119 -128111646 + AluY SINE Alu 1 298 -13 359 234 109 99 chr10 12206658 12206850 -128109915 - L1ME4a LINE L1 -1 6120 5927 419 35 0 0 chr10 12208207 12208264 -128108501 - AluY SINE Alu -10 300 244 815 92 0 0 chr10 12208264 12208373 -128108392 - AluY SINE Alu -138 173 65 2182 81 0 20 chr10 12208473 12208771 -128107994 - AluSc SINE Alu -17 292 1 1056 83 0 0 chr10 12208775 12208908 -128107857 - AluSq/x SINE Alu -179 133 1 876 277 109 27 chr10 12209430 12209834 -128106931 + MLT1J1 LTR MaLR 1 437 -9 258 277 124 67 chr10 12209943 12210225 -128106540 + L2 LINE L2 1728 2025 -1289 2212 100 0 0 chr10 12210550 12210850 -128105915 - AluSx SINE Alu -12 300 1 207 0 0 0 chr10 12210944 12210967 -128105798 + (T)n Simple_repeat Simple_repeat 1 23 0 2182 101 0 19 chr10 12211187 12211528 -128105237 - AluSg SINE Alu 0 310 1 286 250 43 17 chr10 12211578 12211694 -128105071 - Charlie2 DNA MER1_type -42 2820 2702 886 171 40 1 chr10 12211695 12211956 -128104809 - AluJo SINE Alu -10 302 2 2079 122 0 0 chr10 12212095 12212398 -128104367 - AluSx SINE Alu -9 303 1 404 260 32 32 chr10 12212402 12212556 -128104209 - L2 LINE L2 -239 3074 2921 410 143 13 0 chr10 12212653 12212730 -128104035 + CT-rich Low_complexity Low_complexity 1 78 0 224 253 147 0 chr10 12212899 12212974 -128103791 - L2 LINE L2 0 3313 3228 2262 161 114 2 chr10 12213793 12214240 -128102525 + MER61D LTR ERV1 5 501 0 281 340 0 0 chr10 12214247 12214341 -128102424 - L2 LINE L2 -45 3227 3134 2092 117 3 0 chr10 12214357 12214657 -128102108 + AluSx SINE Alu 1 301 -11 437 167 115 0 chr10 12214659 12214755 -128102010 - MLT2B1 LTR ERVL -413 107 1 339 348 32 27 chr10 12214756 12214943 -128101822 - L2 LINE L2 -460 2854 2667 189 349 63 16 chr10 12214945 12215071 -128101694 - L2 LINE L2 -208 3064 2933 454 307 91 99 chr10 12215137 12215296 -128101469 - L2 LINE L2 -453 2861 2702 2746 122 26 5 chr10 12215296 12215715 -128101050 + MSTA LTR MaLR 1 428 0 454 307 91 99 chr10 12215715 12216213 -128100552 - L2 LINE L2 -612 2702 2209 1826 157 3 0 chr10 12216534 12216834 -128099931 - AluJo SINE Alu -11 301 1 2003 90 0 11 chr10 12216971 12217250 -128099515 + AluSx SINE Alu 35 310 -2 2024 114 14 0 chr10 12217876 12218165 -128098600 - AluSq SINE Alu -18 295 3 2155 81 46 0 chr10 12218506 12218789 -128097976 + AluSc SINE Alu 1 296 -13 2279 94 7 7 chr10 12218866 12219164 -128097601 + AluSg SINE Alu 1 298 -12 2270 96 20 7 chr10 12220063 12220366 -128096399 + AluSx SINE Alu 1 307 -5 377 262 64 21 chr10 12220399 12220586 -128096179 - L2 LINE L2 -1001 2313 2119 679 255 65 56 chr10 12220607 12220929 -128095836 + Charlie2 DNA MER1_type 1 325 -2457 1657 211 41 19 chr10 12220932 12221348 -128095417 + Charlie2 DNA MER1_type 1857 2281 -581 873 191 30 81 chr10 12221348 12221463 -128095302 + L1ME1 LINE L1 5939 6037 -129 2043 150 0 0 chr10 12221463 12221763 -128095002 - AluSx SINE Alu -11 301 2 873 191 30 81 chr10 12221763 12221883 -128094882 + L1ME1 LINE L1 6037 6162 -4 697 245 126 16 chr10 12221897 12222269 -128094496 + Charlie2 DNA MER1_type 2280 2692 -170 1491 96 5 0 chr10 12222269 12222467 -128094298 - AluSg/x SINE Alu -13 297 99 21 36 0 0 chr10 12222876 12222904 -128093861 + AT_rich Low_complexity Low_complexity 1 28 0 2374 92 0 0 chr10 12223009 12223304 -128093461 + AluSg SINE Alu 1 295 -15 460 237 124 12 chr10 12223368 12223537 -128093228 + L1ME3A LINE L1 5680 5867 -303 191 128 51 0 chr10 12224366 12224405 -128092360 + (CATA)n Simple_repeat Simple_repeat 2 42 0 22 56 0 0 chr10 12224698 12224734 -128092031 + AT_rich Low_complexity Low_complexity 1 36 0 368 257 73 0 chr10 12224758 12224867 -128091898 - L2 LINE L2 0 3313 3197 1181 145 67 0 chr10 12224966 12225159 -128091606 + MER46A DNA MER2_type 31 236 0 396 257 3 25 chr10 12226321 12226456 -128090309 + MIR SINE MIR 59 186 -61 355 278 126 17 chr10 12226826 12227056 -128089709 - MARNA DNA Mariner -198 388 134 531 151 315 0 chr10 12227142 12227288 -128089477 - MER44D DNA MER2_type -147 462 1 554 259 47 67 chr10 12227955 12228356 -128088409 + L1MEd LINE L1 860 1252 -4867 336 273 152 18 chr10 12228410 12228700 -128088065 + L1M1 LINE L1 2690 3014 -4551 1991 143 10 0 chr10 12229110 12229410 -128087355 - AluSx SINE Alu -9 303 1 926 196 0 6 chr10 12229709 12229877 -128086888 + AluJb SINE Alu 131 297 -15 204 274 48 83 chr10 12230640 12230808 -128085957 + L2 LINE L2 2917 3078 -194 181 229 0 49 chr10 12230872 12230933 -128085832 + L2 LINE L2 3251 3308 -5 1958 139 0 7 chr10 12231227 12231543 -128085222 - AluSx SINE Alu 0 314 1 23 68 0 0 chr10 12233341 12233385 -128083380 + GC_rich Low_complexity Low_complexity 1 44 0 24 67 0 0 chr10 12233544 12233589 -128083176 + GC_rich Low_complexity Low_complexity 1 45 0 185 0 0 39 chr10 12233690 12233716 -128083049 + (CGCGG)n Simple_repeat Simple_repeat 4 28 0 235 187 13 27 chr10 12233867 12233942 -128082823 + (CCG)n Simple_repeat Simple_repeat 2 75 0 477 241 55 65 chr10 12234181 12234380 -128082385 + MIR SINE MIR 12 208 -54 240 303 25 8 chr10 12234989 12235111 -128081654 + L2 LINE L2 3102 3225 -88 227 182 0 0 chr10 12235136 12235180 -128081585 + Alu SINE Alu 258 301 -1 2717 32 0 0 chr10 12235219 12235529 -128081236 - AluYa5 SINE Alu -1 310 1 234 232 18 0 chr10 12235563 12235619 -128081146 + MIR SINE MIR 205 261 -1 1896 148 10 0 chr10 12235621 12235911 -128080854 - AluSx SINE Alu -19 293 1 1703 219 152 20 chr10 12235929 12236423 -128080342 - L1MC4 LINE L1 -1 8041 7483 2338 84 3 0 chr10 12236751 12237084 -128079681 - AluSp SINE Alu 0 334 1 2229 112 3 10 chr10 12237084 12237388 -128079377 - AluSx SINE Alu -9 303 1 264 243 0 0 chr10 12237394 12237468 -128079297 + CT-rich Low_complexity Low_complexity 5 78 0 3191 178 122 6 chr10 12237724 12238399 -128078366 + L1MB7 LINE L1 5415 6167 -17 2305 104 0 7 chr10 12238761 12239070 -128077695 + AluSg SINE Alu 1 307 -3 521 198 0 0 chr10 12239442 12239543 -128077222 + L1M3 LINE L1 5605 5705 -466 757 115 0 0 chr10 12239543 12239680 -128077085 - AluSg/x SINE Alu 0 306 170 1101 159 18 36 chr10 12240099 12240319 -128076446 + AluJo SINE Alu 84 299 -13 4509 189 28 24 chr10 12240334 12240782 -128075983 - L1MB2 LINE L1 -2 6169 5724 2188 113 0 0 chr10 12240782 12241066 -128075699 + AluSx SINE Alu 1 284 -28 4509 189 28 24 chr10 12241066 12242216 -128074549 - L1MB2 LINE L1 -447 5724 4564 452 139 139 0 chr10 12242316 12242395 -128074370 - MLT1B LTR MaLR -300 90 1 5355 221 17 19 chr10 12242395 12243766 -128072999 - L1MB2 LINE L1 -2050 4096 2729 926 243 87 33 chr10 12243918 12244194 -128072571 - MLT1J2 LTR MaLR -147 303 13 466 242 167 11 chr10 12244198 12244384 -128072381 + HAL1 LINE L1 1581 1795 -712 1878 154 18 0 chr10 12244562 12244841 -128071924 - AluJb SINE Alu -28 284 1 2479 68 0 3 chr10 12244951 12245246 -128071519 - AluY SINE Alu -17 294 1 384 318 61 98 chr10 12245287 12245847 -128070918 - LTR67 LTR ERVL -3 554 16 361 200 0 11 chr10 12246222 12246312 -128070453 + HAL1 LINE L1 2270 2358 -149 1057 176 0 6 chr10 12246884 12247054 -128069711 - AluSx SINE Alu -143 169 1 331 308 0 11 chr10 12247089 12247180 -128069585 + MER45 DNA AcHobo 1 90 -88 2225 114 0 0 chr10 12247274 12247564 -128069201 + AluSq SINE Alu 1 290 -23 374 167 0 0 chr10 12247596 12247650 -128069115 + MLT1D LTR MaLR 352 405 -100 433 233 44 0 chr10 12247650 12247740 -128069025 - L1MC/D LINE L1 -2203 5605 5512 2358 107 0 0 chr10 12247955 12248255 -128068510 + AluSx SINE Alu 1 300 -12 1729 171 20 3 chr10 12248325 12248630 -128068135 + AluJb SINE Alu 1 310 -2 24 32 0 0 chr10 12249874 12249905 -128066860 + AT_rich Low_complexity Low_complexity 1 31 0 1929 150 5 48 chr10 12250395 12250707 -128066058 + L1MB8 LINE L1 5811 6106 -72 2214 113 0 10 chr10 12250707 12251009 -128065756 - AluSx SINE Alu -8 304 6 1929 150 5 48 chr10 12251009 12251075 -128065690 + L1MB8 LINE L1 6106 6173 -5 1203 144 24 34 chr10 12251835 12252043 -128064722 + AluSg/x SINE Alu 98 303 -9 991 113 0 0 chr10 12252047 12252180 -128064585 + AluSq/x SINE Alu 2 134 -179 291 136 23 0 chr10 12252189 12252233 -128064532 + AluS SINE Alu 230 274 -26 651 33 0 13 chr10 12252234 12252383 -128064382 + (GGAA)n Simple_repeat Simple_repeat 1 147 0 1214 50 17 17 chr10 12252383 12252563 -128064202 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2196 94 0 57 chr10 12253110 12253441 -128063324 - AluSx SINE Alu 0 312 1 1743 187 96 8 chr10 12254931 12255294 -128061471 + L1MCa LINE L1 103 497 -5929 2268 117 0 0 chr10 12255313 12255612 -128061153 - AluSg SINE Alu -7 303 5 258 172 0 31 chr10 12255714 12255778 -128060987 + CT-rich Low_complexity Low_complexity 1 62 0 1302 191 4 8 chr10 12255801 12256037 -128060728 - AluJo SINE Alu -77 235 1 3338 160 70 22 chr10 12256037 12256718 -128060047 + L1MCa LINE L1 482 1195 -5231 509 259 101 77 chr10 12257144 12257519 -128059246 + L1ME LINE L1 5389 5772 -349 2433 75 0 0 chr10 12257549 12257843 -128058922 + AluSc SINE Alu 1 294 -15 1063 208 48 111 chr10 12258079 12258423 -128058342 - MLT1A1 LTR MaLR 0 365 45 1758 142 53 11 chr10 12258423 12258705 -128058060 + AluJo SINE Alu 5 298 -14 1063 208 48 111 chr10 12258705 12258748 -128058017 - MLT1A1 LTR MaLR -320 45 1 180 0 0 0 chr10 12259409 12259429 -128057336 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1595 188 7 7 chr10 12259730 12260018 -128056747 + AluJo SINE Alu 1 288 -24 378 0 0 0 chr10 12260594 12260636 -128056129 + (A)n Simple_repeat Simple_repeat 1 42 0 1873 138 11 0 chr10 12261286 12261562 -128055203 + AluSx SINE Alu 1 279 -33 336 161 0 0 chr10 12261565 12261627 -128055138 + GA-rich Low_complexity Low_complexity 3 64 0 1295 182 57 109 chr10 12262969 12263177 -128053588 + L1MA10 LINE L1 5918 6135 -199 2370 105 0 0 chr10 12263177 12263482 -128053283 - AluSc SINE Alu -4 305 1 1871 152 28 7 chr10 12263487 12263777 -128052988 - AluJo SINE Alu -16 296 1 1295 182 57 109 chr10 12263777 12264002 -128052763 + L1MA10 LINE L1 6139 6334 0 3291 102 11 0 chr10 12265492 12265945 -128050820 - L1PA10 LINE L1 -32 6136 5679 627 64 0 0 chr10 12265944 12266022 -128050743 + L1PA10 LINE L1 5579 5656 -512 * 204 40 0 0 chr10 12266489 12266514 -128050251 + (TG)n Simple_repeat Simple_repeat 2 26 0 722 141 8 0 chr10 12267428 12267556 -128049209 + GA-rich Low_complexity Low_complexity 1 129 0 1940 152 0 16 chr10 12267842 12268157 -128048608 - AluJo SINE Alu -2 310 1 733 318 96 35 chr10 12268635 12269302 -128047463 - L2 LINE L2 -344 2970 2263 2224 101 0 17 chr10 12270270 12270602 -128046163 + AluSx SINE Alu 1 327 0 1606 203 14 35 chr10 12270857 12270899 -128045866 - MER58B DNA MER1_type -2079 341 300 1611 163 3 63 chr10 12270899 12271088 -128045677 - AluJo SINE Alu 0 303 104 1701 104 0 5 chr10 12271088 12271310 -128045455 + AluSg/x SINE Alu 85 305 -7 2149 107 0 27 chr10 12271311 12271611 -128045154 + AluSc SINE Alu 1 292 -17 1611 163 3 63 chr10 12271611 12271740 -128045025 - AluJo SINE Alu -198 105 1 1606 203 14 35 chr10 12271740 12272041 -128044724 - MER58B DNA MER1_type -2120 300 4 2382 97 3 0 chr10 12272044 12272343 -128044422 - AluSx SINE Alu -12 300 1 375 150 0 0 chr10 12272402 12272482 -128044283 - AluSc SINE Alu -24 275 196 997 160 19 0 chr10 12272627 12272783 -128043982 - Tigger3(Golem) DNA MER2_type -2870 159 1 242 243 0 43 chr10 12273060 12273130 -128043635 + L2 LINE L2 3201 3267 -5 1860 125 0 4 chr10 12273202 12273466 -128043299 + AluSx SINE Alu 39 301 -11 2158 141 0 3 chr10 12274595 12274907 -128041858 - AluSx SINE Alu -1 311 1 353 317 27 33 chr10 12275006 12275189 -128041576 + L2 LINE L2 3131 3312 -1 245 208 14 0 chr10 12275189 12275261 -128041504 + GA-rich Low_complexity Low_complexity 4 76 0 836 257 116 56 chr10 12275823 12276305 -128040460 + MLT1G1 LTR MaLR 83 593 -2 432 97 0 0 chr10 12276704 12276766 -128039999 + (TA)n Simple_repeat Simple_repeat 2 63 0 727 262 129 21 chr10 12276809 12277088 -128039677 + MER46C DNA MER2_type 1 309 -29 739 296 35 16 chr10 12277142 12277399 -128039366 + MIR SINE MIR 1 262 0 1390 201 92 3 chr10 12277423 12277588 -128039177 - AluJo SINE Alu -2 310 161 286 85 34 0 chr10 12277588 12277647 -128039118 + T-rich Low_complexity Low_complexity 2 62 0 1390 201 92 3 chr10 12277647 12277764 -128039001 - AluJo SINE Alu -151 161 3 2134 128 3 3 chr10 12278136 12278434 -128038331 + AluSx SINE Alu 1 298 -14 231 232 89 71 chr10 12278475 12278587 -128038178 - MLT2E LTR ERVL -477 151 38 834 227 131 65 chr10 12278778 12279267 -128037498 + MER113 DNA MER1_type? 1 521 0 5026 160 28 6 chr10 12279412 12280537 -128036228 - L1MB5 LINE L1 -8 6166 5015 2119 113 0 0 chr10 12280802 12281135 -128035630 + AluSg SINE Alu 1 333 0 323 227 0 0 chr10 12281357 12281423 -128035342 + L1MB1 LINE L1 6100 6165 -3 668 282 85 16 chr10 12281484 12281766 -128034999 + L1ME4a LINE L1 5502 5808 -313 1922 151 3 17 chr10 12281766 12282065 -128034700 + AluJb SINE Alu 1 295 -17 668 282 85 16 chr10 12282065 12282087 -128034678 + L1ME4a LINE L1 5808 5827 -294 2161 128 0 10 chr10 12282087 12282385 -128034380 + AluSx SINE Alu 1 295 -17 195 384 63 28 chr10 12282555 12282810 -128033955 + L2 LINE L2 2473 2736 -578 260 355 35 44 chr10 12283163 12283366 -128033399 + L3 LINE CR1 184 384 -1193 1952 164 0 0 chr10 12283936 12284234 -128032531 + AluSx SINE Alu 1 298 -14 2008 161 3 0 chr10 12284314 12284606 -128032159 + AluSx SINE Alu 1 293 -19 339 85 0 0 chr10 12284610 12284657 -128032108 + (TA)n Simple_repeat Simple_repeat 2 48 0 1087 238 70 45 chr10 12284791 12285190 -128031575 + MLT1I LTR MaLR 1 409 0 310 297 40 37 chr10 12285350 12285529 -128031236 + MIR SINE MIR 17 193 -63 201 39 0 0 chr10 12286321 12286347 -128030418 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2000 98 18 18 chr10 12286355 12286630 -128030135 - AluSx SINE Alu -32 280 6 316 100 0 0 chr10 12286630 12286670 -128030095 - Alu SINE Alu -260 40 1 1714 160 13 33 chr10 12286804 12287104 -128029661 - AluJb SINE Alu -18 294 1 476 324 14 9 chr10 12287104 12287320 -128029445 - L1M4 LINE L1 -1929 4217 4001 850 128 0 45 chr10 12287325 12287458 -128029307 + FRAM SINE Alu 33 159 -17 25 0 0 0 chr10 12287460 12287485 -128029280 + AT_rich Low_complexity Low_complexity 1 25 0 274 190 50 58 chr10 12287539 12287660 -128029105 + Charlie2 DNA MER1_type 2671 2790 -72 571 168 15 102 chr10 12287742 12287879 -128028886 - MER63 DNA MER1_type -311 751 1 319 155 138 0 chr10 12287924 12287982 -128028783 - L2 LINE L2 -3 3310 3245 538 208 96 0 chr10 12288617 12288742 -128028023 - MER58B DNA MER1_type -5 336 200 732 194 82 0 chr10 12288805 12288975 -128027790 + MER20 DNA MER1_type 36 219 0 386 276 56 47 chr10 12289147 12289402 -128027363 + L1ME4a LINE L1 5573 5833 -288 646 235 60 6 chr10 12289402 12289568 -128027197 - MER5B DNA MER1_type -1 177 3 386 276 56 47 chr10 12289568 12289634 -128027131 + L1ME4a LINE L1 5833 5897 -224 508 101 22 0 chr10 12289652 12289741 -128027024 + (TGGA)n Simple_repeat Simple_repeat 1 91 0 308 198 83 33 chr10 12289950 12290071 -128026694 - L1ME4a LINE L1 0 6121 5995 1953 125 3 53 chr10 12290600 12290776 -128025989 - AluSx SINE Alu -7 305 122 204 40 0 0 chr10 12290776 12290801 -128025964 + (TGG)n Simple_repeat Simple_repeat 1 25 0 2228 90 0 3 chr10 12290809 12291098 -128025667 - AluSq SINE Alu -25 288 1 1953 125 3 53 chr10 12291098 12291233 -128025532 - AluSx SINE Alu -197 115 1 22 56 0 0 chr10 12291846 12291882 -128024883 + AT_rich Low_complexity Low_complexity 1 36 0 2419 65 3 13 chr10 12292017 12292323 -128024442 - AluY SINE Alu -8 303 1 2063 138 0 3 chr10 12292578 12292882 -128023883 + AluSx SINE Alu 1 303 -9 907 167 26 26 chr10 12292894 12293050 -128023715 + AluJb SINE Alu 130 285 -27 1944 148 0 10 chr10 12293486 12293797 -128022968 + AluJb SINE Alu 1 308 -4 3260 151 93 63 chr10 12293988 12294274 -128022491 + L1MB2 LINE L1 5434 5710 -461 1725 94 0 4 chr10 12294274 12294508 -128022257 + AluY SINE Alu 62 294 -17 3260 151 93 63 chr10 12294508 12294931 -128021834 + L1MB2 LINE L1 5710 6164 -7 360 321 125 64 chr10 12295685 12296028 -128020737 + L2 LINE L2 2897 3260 -12 21 0 0 0 chr10 12296476 12296497 -128020268 + AT_rich Low_complexity Low_complexity 1 21 0 1194 231 73 43 chr10 12296936 12297304 -128019461 + L1MC4 LINE L1 7522 7900 -142 27 62 0 0 chr10 12297310 12297358 -128019407 + AT_rich Low_complexity Low_complexity 1 48 0 383 224 9 35 chr10 12300486 12300602 -128016163 + L1MC4 LINE L1 7929 8041 -1 24 77 0 0 chr10 12300632 12300684 -128016081 + AT_rich Low_complexity Low_complexity 1 52 0 2176 106 7 7 chr10 12300711 12301004 -128015761 - AluSx SINE Alu -19 293 1 280 204 224 0 chr10 12301204 12301302 -128015463 - MER20B DNA MER1_type -663 120 1 209 264 0 0 chr10 12303630 12303683 -128013082 - L2 LINE L2 -16 3297 3245 1793 187 88 78 chr10 12304494 12305007 -128011758 - MLT2B1 LTR ERVL 0 520 3 1744 140 19 0 chr10 12305256 12305513 -128011252 + AluJo SINE Alu 21 282 -30 213 65 0 0 chr10 12305513 12305544 -128011221 + (TC)n Simple_repeat Simple_repeat 2 32 0 378 0 0 0 chr10 12305544 12305586 -128011179 + (CA)n Simple_repeat Simple_repeat 1 42 0 769 163 0 8 chr10 12306177 12306300 -128010465 - FLAM_A SINE Alu -15 127 6 2230 136 0 0 chr10 12307651 12307959 -128008806 + AluSx SINE Alu 1 308 -4 3850 155 5 65 chr10 12308104 12308220 -128008545 + L1MB3 LINE L1 5451 5572 -611 2684 42 3 3 chr10 12308220 12308531 -128008234 + AluY SINE Alu 1 311 0 3850 155 5 65 chr10 12308531 12309012 -128007753 + L1MB3 LINE L1 5572 5993 -190 2322 79 7 0 chr10 12309012 12309302 -128007463 - AluSq SINE Alu -21 292 1 3850 155 5 65 chr10 12309302 12309482 -128007283 + L1MB3 LINE L1 5993 6182 -1 1728 160 7 0 chr10 12309876 12310158 -128006607 + L1MB3 LINE L1 5571 5854 -329 230 204 19 0 chr10 12310965 12311019 -128005746 + L2 LINE L2 3217 3271 -1 243 0 0 0 chr10 12311471 12311498 -128005267 + (CAA)n Simple_repeat Simple_repeat 1 27 0 609 112 19 47 chr10 12311740 12311847 -128004918 - FLAM_C SINE Alu -32 111 8 1829 136 4 0 chr10 12312328 12312585 -128004180 - AluSx SINE Alu -20 292 35 1839 168 62 54 chr10 12314729 12315152 -128001613 - MSTB LTR MaLR 0 426 1 1450 136 0 5 chr10 12315441 12315655 -128001110 + AluJb SINE Alu 1 213 -99 2236 108 7 0 chr10 12315880 12316185 -128000580 - AluSx SINE Alu -5 307 1 926 237 137 35 chr10 12316186 12316558 -128000207 - MLT1C LTR MaLR -52 415 6 1921 148 32 86 chr10 12316566 12316790 -127999975 - MLT1B LTR MaLR -6 384 190 1887 167 0 16 chr10 12316790 12317102 -127999663 - AluJo SINE Alu -4 308 2 1921 148 32 86 chr10 12317102 12317283 -127999482 - MLT1B LTR MaLR -200 190 1 226 163 61 0 chr10 12317416 12317465 -127999300 - MIR SINE MIR -16 246 195 504 254 6 21 chr10 12317797 12317959 -127998806 - MLT1K LTR MaLR -2 613 431 2574 60 0 0 chr10 12317959 12318257 -127998508 - AluY SINE Alu -13 298 1 487 120 8 103 chr10 12318381 12318433 -127998332 - L1MA2 LINE L1 0 6304 6249 183 100 0 0 chr10 12318433 12318463 -127998302 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 1959 106 7 14 chr10 12318463 12318746 -127998019 - AluSx SINE Alu -31 281 1 487 120 8 103 chr10 12318746 12318809 -127997956 - L1MA2 LINE L1 -53 6251 6199 577 229 137 78 chr10 12318819 12319125 -127997640 - MLT1K LTR MaLR -162 426 103 1047 200 57 141 chr10 12319338 12319870 -127996895 + MLT1D LTR MaLR 17 624 -2 1924 234 139 63 chr10 12320200 12320363 -127996402 + L2 LINE L2 1818 1967 -1346 1996 141 20 0 chr10 12320363 12320660 -127996105 - AluSx SINE Alu -9 303 1 1924 234 139 63 chr10 12320660 12321233 -127995532 + L2 LINE L2 1967 2495 -818 1807 143 55 10 chr10 12321233 12321526 -127995239 - AluSx SINE Alu -6 306 1 1924 234 139 63 chr10 12321526 12321543 -127995222 + L2 LINE L2 2495 2509 -804 1658 160 29 13 chr10 12321543 12321856 -127994909 - L1MB4 LINE L1 0 6180 5863 1924 234 139 63 chr10 12321856 12322480 -127994285 + L2 LINE L2 2509 3309 -4 807 189 52 0 chr10 12322539 12322692 -127994073 - AluJo SINE Alu -149 163 3 923 196 12 0 chr10 12322724 12322887 -127993878 + AluJb SINE Alu 137 301 -11 252 304 11 43 chr10 12322912 12323004 -127993761 + MER5B DNA MER1_type 87 175 -3 428 298 76 18 chr10 12323376 12323547 -127993218 - MIR SINE MIR -73 189 9 2192 119 3 6 chr10 12323729 12324040 -127992725 + AluSx SINE Alu 3 312 0 1214 176 0 52 chr10 12324043 12324293 -127992472 + MLT1B LTR MaLR 1 237 -153 446 279 20 9 chr10 12324524 12324708 -127992057 + L1MA4A LINE L1 5686 5870 -300 2158 108 7 3 chr10 12324711 12324999 -127991766 + AluSx SINE Alu 1 289 -23 1179 153 0 0 chr10 12325052 12325215 -127991550 - AluJb SINE Alu -15 297 135 635 311 48 9 chr10 12325420 12325648 -127991117 - MIR SINE MIR -24 238 2 2103 102 0 20 chr10 12326004 12326297 -127990468 - AluSx SINE Alu -17 295 9 393 349 40 21 chr10 12326308 12326541 -127990224 - MIR SINE MIR -25 237 1 356 173 25 25 chr10 12326786 12326867 -127989898 + MER5B DNA MER1_type 25 105 -73 2079 142 0 19 chr10 12326885 12327196 -127989569 - AluSx SINE Alu -7 305 1 1776 157 7 7 chr10 12327204 12327491 -127989274 - AluJb SINE Alu -25 287 1 2147 119 0 3 chr10 12327550 12327844 -127988921 - AluSg1 SINE Alu -16 293 1 1905 151 7 62 chr10 12327865 12328269 -127988496 + MLT1B LTR MaLR 1 382 -8 251 344 0 0 chr10 12328540 12328630 -127988135 + GA-rich Low_complexity Low_complexity 2 91 0 304 291 52 37 chr10 12329321 12329455 -127987310 - MIR3 SINE MIR -4 204 69 461 328 47 81 chr10 12329579 12329960 -127986805 + L2 LINE L2 2902 3269 -3 673 196 159 0 chr10 12330010 12330148 -127986617 + FRAM SINE Alu 9 168 -8 2686 78 33 19 chr10 12330217 12330420 -127986345 - THE1B LTR MaLR 0 364 152 2359 103 0 3 chr10 12330420 12330720 -127986045 + AluSc SINE Alu 2 300 -9 2686 78 33 19 chr10 12330720 12330875 -127985890 - THE1B LTR MaLR -212 152 1 831 131 0 36 chr10 12331333 12331470 -127985295 - FRAM SINE Alu -5 171 40 2180 120 13 0 chr10 12332519 12332696 -127984069 - AluSx SINE Alu -7 305 121 230 0 33 0 chr10 12332696 12332726 -127984039 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 2180 120 13 0 chr10 12332726 12332849 -127983916 - AluSx SINE Alu -191 121 1 517 195 49 41 chr10 12332850 12332973 -127983792 - L2 LINE L2 -3 3310 3187 822 134 0 0 chr10 12333654 12333766 -127982999 - FLAM_C SINE Alu -31 112 1 651 244 80 19 chr10 12333773 12333986 -127982779 - MLT1C LTR MaLR 0 467 242 2335 89 3 7 chr10 12334060 12334362 -127982403 - AluSp SINE Alu -6 307 7 2062 141 3 7 chr10 12334476 12334774 -127981991 - AluJb SINE Alu -15 297 1 390 262 10 0 chr10 12334836 12334939 -127981826 + L1ME LINE L1 5606 5709 -412 27 49 0 0 chr10 12335076 12335117 -127981648 + AT_rich Low_complexity Low_complexity 1 41 0 192 40 0 0 chr10 12335347 12335372 -127981393 + (CA)n Simple_repeat Simple_repeat 2 26 0 1781 167 0 17 chr10 12335822 12336116 -127980649 + AluJo SINE Alu 24 312 0 2452 77 3 6 chr10 12336216 12336528 -127980237 - AluY SINE Alu 0 311 1 23 0 0 0 chr10 12336688 12336711 -127980054 + GC_rich Low_complexity Low_complexity 1 23 0 593 279 101 68 chr10 12337692 12337848 -127978917 - L2 LINE L2 -6 3307 3158 2419 77 0 3 chr10 12337848 12338148 -127978617 + AluSq SINE Alu 1 299 -14 593 279 101 68 chr10 12338148 12338389 -127978376 - L2 LINE L2 -155 3158 2897 1596 161 58 33 chr10 12338398 12338662 -127978103 + L1MA9 LINE L1 5976 6251 -61 2027 160 0 3 chr10 12338662 12338968 -127977797 + AluJo SINE Alu 1 305 -7 1596 161 58 33 chr10 12338968 12339032 -127977733 + L1MA9 LINE L1 6251 6312 0 293 291 168 16 chr10 12339037 12339346 -127977419 - L2 LINE L2 -411 2903 2548 2579 130 59 17 chr10 12340056 12340465 -127976300 - MSTB LTR MaLR 0 426 1 1435 239 30 16 chr10 12340637 12341006 -127975759 + MER87 LTR ERV1 168 541 0 637 226 155 11 chr10 12341006 12341187 -127975578 - MIR SINE MIR -4 258 52 7174 168 149 52 chr10 12341255 12342854 -127973911 + MER52A LTR ERV1 1 1755 0 811 239 56 17 chr10 12342860 12343094 -127973671 + L2 LINE L2 2432 2674 -640 41772 31 21 1 chr10 12343095 12349124 -127967641 - L1PA2 LINE L1 -1 6154 4 654 90 0 0 chr10 12349144 12349233 -127967532 - THE1B-int LTR MaLR -1183 397 309 518 136 12 0 chr10 12349237 12349318 -127967447 - THE1B LTR MaLR -83 281 200 1064 279 72 16 chr10 12349319 12349869 -127966896 + L2 LINE L2 2661 3311 -2 290 279 95 34 chr10 12349845 12349991 -127966774 - MIR SINE MIR -60 148 18 * 1694 161 3 27 chr10 12350201 12350493 -127966272 - AluJo SINE Alu -21 291 7 2172 149 33 30 chr10 12350588 12350951 -127965814 - THE1B LTR MaLR 0 364 1 2337 105 0 0 chr10 12351331 12351626 -127965139 - AluSx SINE Alu -17 295 1 34 0 0 0 chr10 12352085 12352119 -127964646 + AT_rich Low_complexity Low_complexity 1 34 0 2387 79 0 3 chr10 12352976 12353268 -127963497 - AluSx SINE Alu -21 291 1 484 152 7 7 chr10 12353927 12354065 -127962700 + (CGGGG)n Simple_repeat Simple_repeat 4 141 0 23 0 0 0 chr10 12354360 12354383 -127962382 + GC_rich Low_complexity Low_complexity 1 23 0 513 229 125 85 chr10 12354955 12355331 -127961434 - MER115 DNA AcHobo -27 666 276 354 253 112 54 chr10 12355784 12355993 -127960772 - MIR SINE MIR -35 227 8 183 306 357 11 chr10 12356320 12356777 -127959988 - L2 LINE L2 -722 2592 1978 2402 105 0 0 chr10 12357733 12358038 -127958727 + AluSq SINE Alu 6 310 -3 1723 73 21 59 chr10 12358038 12358324 -127958441 + L1MA2 LINE L1 6029 6303 -1 1836 110 4 0 chr10 12358336 12358572 -127958193 + AluSq SINE Alu 1 237 -76 1655 142 8 0 chr10 12359908 12360148 -127956617 - AluJo SINE Alu -10 302 61 252 66 0 131 chr10 12360152 12360213 -127956552 - AluJo SINE Alu -151 151 99 2175 138 0 0 chr10 12360286 12360591 -127956174 + AluSx SINE Alu 1 305 -7 223 250 117 0 chr10 12360677 12360737 -127956028 + MIR3 SINE MIR 126 192 -16 2592 83 0 0 chr10 12361466 12361778 -127954987 - AluSx SINE Alu 0 312 1 199 266 125 31 chr10 12362285 12362349 -127954416 - L2 LINE L2 -2 3270 3201 217 222 0 0 chr10 12362454 12362499 -127954266 + (TTCA)n Simple_repeat Simple_repeat 4 48 0 2241 109 0 26 chr10 12363798 12364102 -127952663 - AluSx SINE Alu -16 296 1 346 262 115 16 chr10 12364113 12364304 -127952461 - L1ME4a LINE L1 -9 6112 5903 864 246 75 0 chr10 12364327 12364526 -127952239 - MIR SINE MIR -17 245 32 302 232 116 39 chr10 12364626 12364781 -127951984 - L1ME4a LINE L1 -355 5766 5600 2159 120 7 7 chr10 12364781 12365073 -127951692 + AluSx SINE Alu 1 292 -20 1822 134 0 22 chr10 12365445 12365714 -127951051 - AluSx SINE Alu 0 312 50 2150 121 7 16 chr10 12366721 12367026 -127949739 + AluSx SINE Alu 1 302 -10 2107 102 49 0 chr10 12368433 12368717 -127948048 - AluSx SINE Alu -14 298 1 1814 178 13 45 chr10 12370599 12370753 -127946012 + MLT1A1 LTR MaLR 1 158 -207 2422 99 0 3 chr10 12370753 12371066 -127945699 + AluSq SINE Alu 1 312 -1 1814 178 13 45 chr10 12371066 12371288 -127945477 + MLT1A1 LTR MaLR 158 365 0 443 269 140 26 chr10 12371499 12371692 -127945073 - MIR SINE MIR -12 250 36 185 227 23 0 chr10 12372689 12372733 -127944032 - MIR3 SINE MIR -48 160 116 225 236 8 126 chr10 12372803 12372889 -127943876 + L2 LINE L2 2141 2209 -1105 862 203 47 33 chr10 12372889 12373101 -127943664 + MER20 DNA MER1_type 3 217 -2 225 236 8 126 chr10 12373101 12373141 -127943624 + L2 LINE L2 2209 2252 -1062 340 151 0 96 chr10 12373197 12373270 -127943495 - MLT1G3 LTR MaLR -82 513 448 * 616 263 96 12 chr10 12373262 12373502 -127943263 - MLT1G3 LTR MaLR -193 337 78 827 317 50 24 chr10 12373537 12373633 -127943132 - L2 LINE L2 -1 3312 3220 813 173 0 0 chr10 12373633 12373766 -127942999 + FLAM_C SINE Alu 1 133 0 827 317 50 24 chr10 12373766 12374126 -127942639 - L2 LINE L2 -93 3220 2844 2209 95 14 7 chr10 12375993 12376289 -127940476 + AluSx SINE Alu 1 298 -14 284 340 118 13 chr10 12376776 12376929 -127939836 - MIR SINE MIR -37 225 57 2109 151 3 0 chr10 12378031 12378336 -127938429 - AluJo SINE Alu -2 310 5 389 200 0 0 chr10 12378340 12378415 -127938350 - L1M4 LINE L1 -1502 4644 4570 675 276 63 57 chr10 12378469 12378977 -127937788 - L1MC4 LINE L1 -29 8013 7503 1188 148 40 20 chr10 12379147 12379349 -127937416 + AluJo SINE Alu 85 290 -22 1952 218 100 42 chr10 12379363 12379422 -127937343 - MLT1E LTR MaLR -4 589 535 2444 88 0 0 chr10 12379422 12379729 -127937036 - AluY SINE Alu -4 307 1 1952 218 100 42 chr10 12379729 12380219 -127936546 - MLT1E LTR MaLR -58 535 8 368 293 39 14 chr10 12380243 12380460 -127936305 + MLT1L LTR MaLR 359 605 -10 2347 93 0 7 chr10 12380642 12380942 -127935823 + AluSx SINE Alu 1 298 -14 1545 130 0 9 chr10 12381252 12381475 -127935290 + AluSg/x SINE Alu 65 285 -27 315 253 20 91 chr10 12381476 12381575 -127935190 + L1MC4 LINE L1 6614 6705 -1337 2789 196 19 21 chr10 12381989 12382113 -127934652 - L1MB8 LINE L1 -5 6173 6050 2370 112 0 0 chr10 12382113 12382418 -127934347 + AluSx SINE Alu 1 305 -7 2789 196 19 21 chr10 12382418 12382911 -127933854 - L1MB8 LINE L1 -128 6050 5557 2652 64 0 0 chr10 12383002 12383313 -127933452 - AluY SINE Alu 0 311 1 460 188 18 27 chr10 12383663 12383775 -127932990 - MER113 DNA MER1_type? -410 111 1 1079 152 53 6 chr10 12383810 12383981 -127932784 - AluSx SINE Alu -133 179 1 249 211 0 35 chr10 12384230 12384287 -127932478 - L2 LINE L2 -14 3299 3245 213 277 168 10 chr10 12384439 12384540 -127932225 + MIR SINE MIR 76 192 -70 344 273 153 6 chr10 12384833 12385009 -127931756 + LTR16C LTR ERVL 286 487 -4 1741 165 26 0 chr10 12386134 12386406 -127930359 - AluJb SINE Alu -12 300 22 2483 94 3 0 chr10 12386415 12386723 -127930042 - AluSp SINE Alu -4 309 1 2281 123 0 0 chr10 12386804 12387096 -127929669 - AluSx SINE Alu -20 292 1 509 228 48 42 chr10 12387120 12387309 -127929456 - L1MC5 LINE L1 -36 7925 7736 1225 257 76 5 chr10 12387827 12388197 -127928568 + MER20B DNA MER1_type 32 427 -356 1921 135 19 62 chr10 12388219 12388544 -127928221 - AluJb SINE Alu -1 311 1 374 223 61 47 chr10 12388646 12388794 -127927971 + MER20B DNA MER1_type 459 608 -175 369 269 111 0 chr10 12388844 12388952 -127927813 + HAL1 LINE L1 835 954 -1553 1782 148 81 0 chr10 12388953 12389224 -127927541 - AluJo SINE Alu -19 293 1 1291 60 0 0 chr10 12389241 12389390 -127927375 + AluSc SINE Alu 152 300 -9 226 217 43 22 chr10 12389475 12389567 -127927198 + (TA)n Simple_repeat Simple_repeat 1 94 0 659 256 154 11 chr10 12389593 12389832 -127926933 + HAL1 LINE L1 1096 1384 -1123 2374 98 7 0 chr10 12389832 12390137 -127926628 + AluSq SINE Alu 1 307 -6 659 256 154 11 chr10 12390137 12390182 -127926583 + HAL1 LINE L1 1384 1421 -1086 506 283 138 36 chr10 12390440 12390744 -127926021 + LTR16C LTR ERVL 157 491 0 2373 104 25 6 chr10 12390747 12391102 -127925663 - THE1B LTR MaLR -2 362 1 840 93 0 0 chr10 12391621 12391729 -127925036 + AluSg/x SINE Alu 189 296 -13 1085 199 0 15 chr10 12391739 12391945 -127924820 + AluJo SINE Alu 86 288 -24 2106 128 0 0 chr10 12391981 12392262 -127924503 + AluSx SINE Alu 20 300 -12 805 154 0 22 chr10 12392356 12392492 -127924273 + FLAM_C SINE Alu 1 133 -10 1844 198 73 22 chr10 12392497 12392906 -127923859 - MLT2B1 LTR ERVL -90 430 1 2075 115 0 4 chr10 12393269 12393548 -127923217 - AluSx SINE Alu -34 278 1 1517 151 55 19 chr10 12393630 12393924 -127922841 - AluJo SINE Alu 0 313 10 2414 76 0 0 chr10 12393945 12394234 -127922531 - AluSx SINE Alu -19 293 5 662 218 140 10 chr10 12394846 12395039 -127921726 - MER20B DNA MER1_type -1 218 1 367 209 19 57 chr10 12395702 12395807 -127920958 - ORSL DNA AcHobo -2 273 173 25 51 0 0 chr10 12396088 12396127 -127920638 + AT_rich Low_complexity Low_complexity 1 39 0 1557 198 63 11 chr10 12396323 12396687 -127920078 - MLT1B LTR MaLR -4 386 4 2244 113 0 3 chr10 12397042 12397344 -127919421 - AluSx SINE Alu -11 301 1 183 308 119 21 chr10 12397598 12397741 -127919024 + L2 LINE L2 2949 3105 -208 2260 105 0 40 chr10 12397747 12398070 -127918695 - AluSx SINE Alu -2 310 1 2461 92 0 0 chr10 12398355 12398658 -127918107 + AluSg SINE Alu 1 303 -7 404 150 25 0 chr10 12398824 12398904 -127917861 + AluS SINE Alu 230 311 -1 276 348 70 25 chr10 12398905 12399063 -127917702 - L2 LINE L2 -2813 501 337 1017 266 69 0 chr10 12399088 12399437 -127917328 - MER93b LTR ERV1 0 373 1 201 158 0 0 chr10 12399545 12399583 -127917182 + (CAGAGA)n Simple_repeat Simple_repeat 2 39 0 1678 204 6 28 chr10 12400085 12400403 -127916362 - AluJb SINE Alu -1 311 1 207 258 189 45 chr10 12400665 12400797 -127915968 + MER5A DNA MER1_type 1 151 -38 192 200 0 0 chr10 12400842 12400882 -127915883 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr10 12401865 12401886 -127914879 + AT_rich Low_complexity Low_complexity 1 21 0 664 126 4 6 chr10 12401902 12402141 -127914624 + AluJo SINE Alu 10 296 -16 280 212 34 137 chr10 12402162 12402250 -127914515 - MIR3 SINE MIR -65 143 74 1546 234 91 34 chr10 12402250 12402353 -127914412 - MLT1D LTR MaLR -3 502 406 1739 180 42 0 chr10 12402353 12402636 -127914129 + AluJb SINE Alu 1 295 -17 1546 234 91 34 chr10 12402636 12403006 -127913759 - MLT1D LTR MaLR -99 406 2 280 212 34 137 chr10 12403006 12403063 -127913702 - MIR3 SINE MIR -134 74 13 1890 168 94 88 chr10 12403417 12403552 -127913213 - MER4A LTR ERV1 0 872 739 1987 113 40 0 chr10 12403552 12403827 -127912938 + AluSx SINE Alu 1 286 -26 1890 168 94 88 chr10 12403827 12404225 -127912540 - MER4A LTR ERV1 -133 739 345 7951 54 4 4 chr10 12404225 12405232 -127911533 + LTR13 LTR ERVK 1 1007 0 591 15 0 0 chr10 12405242 12405310 -127911455 + (TTTTC)n Simple_repeat Simple_repeat 2 69 0 1890 168 94 88 chr10 12405310 12405425 -127911340 - MER4A LTR ERV1 -535 337 1 1777 95 61 23 chr10 12405957 12406221 -127910544 + AluSq SINE Alu 32 305 -8 786 129 117 37 chr10 12406405 12406494 -127910271 + MER45A DNA AcHobo 2 82 -1499 1799 153 24 7 chr10 12406494 12406789 -127909976 - AluJb SINE Alu -12 300 1 786 129 117 37 chr10 12406789 12406862 -127909903 + MER45A DNA AcHobo 82 177 -1 651 233 6 0 chr10 12406995 12407377 -127909388 + (CA)n Simple_repeat Simple_repeat 1 384 0 1924 145 30 0 chr10 12407535 12407831 -127908934 + AluJo SINE Alu 1 305 -7 367 311 17 56 chr10 12408161 12408341 -127908424 - L1M4 LINE L1 -6294 561 91 1914 131 20 33 chr10 12408438 12408743 -127908022 - AluJo SINE Alu -9 303 3 408 331 7 15 chr10 12409350 12409486 -127907279 + MIR3 SINE MIR 15 149 -59 399 222 0 0 chr10 12409492 12409564 -127907201 + AluJ/FLAM SINE Alu 1 72 -230 345 118 140 54 chr10 12409547 12409640 -127907125 + LTR8A LTR ERV1 468 568 -159 * 1796 159 0 28 chr10 12409777 12410090 -127906675 + AluJo SINE Alu 1 305 0 2325 102 3 3 chr10 12410128 12410431 -127906334 + AluSx SINE Alu 1 303 -9 1554 93 9 26 chr10 12410930 12411156 -127905609 - AluJo SINE Alu -90 222 1 2288 112 3 3 chr10 12411958 12412262 -127904503 - AluSg SINE Alu -6 304 1 742 148 33 0 chr10 12412262 12412384 -127904381 - FLAM_A SINE Alu -7 126 1 2555 51 0 7 chr10 12412399 12412694 -127904071 - AluY SINE Alu -18 293 1 421 233 71 56 chr10 12412695 12412935 -127903830 - L1ME3A LINE L1 -222 5948 5694 440 132 7 176 chr10 12413050 12413142 -127903623 + MLT1B LTR MaLR 3 109 -281 2018 108 11 0 chr10 12413142 12413420 -127903345 - AluSp SINE Alu -10 303 23 440 132 7 176 chr10 12413420 12413455 -127903310 + MLT1B LTR MaLR 109 109 -281 2614 132 26 0 chr10 12413455 12413878 -127902887 + L1PB3 LINE L1 5721 6154 0 25 65 0 0 chr10 12413885 12413931 -127902834 + AT_rich Low_complexity Low_complexity 1 46 0 1249 188 81 4 chr10 12414072 12414343 -127902422 + MLT1B LTR MaLR 95 386 -4 452 276 86 33 chr10 12414348 12414558 -127902207 - L1ME3A LINE L1 -617 5547 5327 267 313 31 0 chr10 12414574 12414670 -127902095 - L1ME3A LINE L1 -860 5286 5188 539 55 0 0 chr10 12414677 12414750 -127902015 - L1PA5 LINE L1 -3 6151 6079 2007 125 14 17 chr10 12414762 12415050 -127901715 - AluSx SINE Alu -25 287 1 686 292 164 53 chr10 12415050 12415151 -127901614 - L1ME3A LINE L1 -1369 4777 4689 3356 121 27 0 chr10 12415151 12415662 -127901103 - MER1A DNA MER1_type -1 526 2 686 292 164 53 chr10 12415662 12416029 -127900736 - L1ME3A LINE L1 -1457 4689 4257 1028 145 63 26 chr10 12416029 12416315 -127900450 - MLT2A2 LTR ERVL 0 453 259 1007 167 18 181 chr10 12417569 12417911 -127898854 + AluJo SINE Alu 2 287 -15 21 0 0 0 chr10 12418973 12418994 -127897771 + AT_rich Low_complexity Low_complexity 1 21 0 2362 106 0 0 chr10 12419084 12419386 -127897379 - AluSx SINE Alu -10 302 1 449 270 54 13 chr10 12420714 12420862 -127895903 + MIR SINE MIR 41 197 -63 2377 95 3 3 chr10 12421122 12421428 -127895337 - AluSx SINE Alu -6 306 1 2487 73 3 0 chr10 12421471 12421772 -127894993 - AluY SINE Alu -9 302 1 2016 153 0 3 chr10 12421894 12422201 -127894564 - AluJb SINE Alu -6 306 1 2102 99 17 0 chr10 12423417 12423710 -127893055 - AluSx SINE Alu -14 298 1 3463 186 29 17 chr10 12423725 12424151 -127892614 + L1MB3 LINE L1 5476 5915 -268 2210 119 0 0 chr10 12424151 12424463 -127892302 + AluSx SINE Alu 1 312 0 3463 186 29 17 chr10 12424463 12424736 -127892029 + L1MB3 LINE L1 5915 6183 0 718 221 97 51 chr10 12425289 12425506 -127891259 + MLT1E1 LTR MaLR 1 227 -427 2148 95 0 0 chr10 12426634 12426918 -127889847 + AluSx SINE Alu 1 284 -28 233 323 30 30 chr10 12427240 12427339 -127889426 + L2 LINE L2 3144 3242 -30 1997 122 0 29 chr10 12427345 12427657 -127889108 - AluSq SINE Alu 0 313 11 1943 109 0 32 chr10 12428045 12428356 -127888409 - AluSx SINE Alu -1 311 11 864 201 13 0 chr10 12428474 12428633 -127888132 + AluJb SINE Alu 139 299 -13 2111 113 7 0 chr10 12428734 12429035 -127887730 + AluSq SINE Alu 1 303 -10 764 267 119 52 chr10 12429077 12429267 -127887498 - L1ME4a LINE L1 -77 6044 5868 2160 111 0 0 chr10 12429267 12429564 -127887201 - AluSx SINE Alu -15 297 1 764 267 119 52 chr10 12429564 12429868 -127886897 - L1ME4a LINE L1 -253 5868 5517 2038 107 0 7 chr10 12429873 12430171 -127886594 + AluSc SINE Alu 1 296 -13 1973 124 0 3 chr10 12430180 12430483 -127886282 + AluSx SINE Alu 1 302 0 23 33 0 0 chr10 12430567 12430597 -127886168 + AT_rich Low_complexity Low_complexity 1 30 0 327 329 118 32 chr10 12430800 12430964 -127885801 - L1ME4a LINE L1 -941 5205 5056 1693 163 3 10 chr10 12430964 12431259 -127885506 - AluJb SINE Alu -13 299 7 327 329 118 32 chr10 12431259 12431374 -127885391 - L1ME4a LINE L1 -1090 5056 4902 288 257 54 0 chr10 12431610 12431684 -127885081 - MIR SINE MIR -89 173 96 2344 32 3 3 chr10 12431847 12432151 -127884614 - AluY SINE Alu 0 304 1 26 0 0 0 chr10 12432351 12432377 -127884388 + AT_rich Low_complexity Low_complexity 1 26 0 321 295 67 7 chr10 12432502 12432651 -127884114 - AluSp SINE Alu -49 254 97 1964 117 21 0 chr10 12433015 12433296 -127883469 - AluSx SINE Alu -25 287 1 208 322 8 25 chr10 12433568 12433689 -127883076 + CT-rich Low_complexity Low_complexity 4 122 0 1609 154 34 17 chr10 12433844 12434137 -127882628 + AluJo SINE Alu 1 298 -14 183 229 0 115 chr10 12434567 12434628 -127882137 + MIR SINE MIR 93 146 -116 310 247 103 10 chr10 12434876 12434973 -127881792 + MIR SINE MIR 98 203 -59 1617 157 0 52 chr10 12435095 12435401 -127881364 + AluJb SINE Alu 1 290 -22 22 56 0 0 chr10 12436754 12436790 -127879975 + AT_rich Low_complexity Low_complexity 1 36 0 4059 183 30 50 chr10 12438203 12438893 -127877872 - L1MB5 LINE L1 0 6174 5472 2115 78 0 11 chr10 12438893 12439216 -127877549 - AluY SINE Alu 0 320 1 1906 150 0 3 chr10 12439216 12439516 -127877249 - AluJb SINE Alu -7 305 7 4059 183 30 50 chr10 12439516 12439774 -127876991 - L1MB5 LINE L1 -700 5474 5259 1756 161 3 0 chr10 12440019 12440304 -127876461 - AluJo SINE Alu -16 296 11 368 287 88 15 chr10 12440402 12440538 -127876227 + MIR3 SINE MIR 32 177 -31 2125 99 0 3 chr10 12440756 12441064 -127875701 + AluSx SINE Alu 1 307 0 221 339 61 57 chr10 12441111 12441356 -127875409 - L2 LINE L2 -59 3213 2968 1807 139 10 0 chr10 12441641 12441929 -127874836 + AluJo SINE Alu 3 293 -19 2035 126 3 0 chr10 12442172 12442474 -127874291 - AluSx SINE Alu -4 308 6 2518 167 19 19 chr10 12442479 12442952 -127873813 - L1PB4 LINE L1 -118 6038 5566 40 0 0 0 chr10 12444326 12444366 -127872399 + AT_rich Low_complexity Low_complexity 1 40 0 1926 141 0 3 chr10 12445182 12445480 -127871285 - AluSx SINE Alu -15 297 1 207 108 0 0 chr10 12445572 12445601 -127871164 + (T)n Simple_repeat Simple_repeat 1 32 -5 696 167 33 8 chr10 12445601 12445721 -127871044 + FLAM_A SINE Alu 1 123 -10 207 108 0 0 chr10 12445721 12445728 -127871037 + (T)n Simple_repeat Simple_repeat 31 37 0 2102 118 0 0 chr10 12445745 12446042 -127870723 + AluSq SINE Alu 1 297 -16 1960 116 0 4 chr10 12446321 12446598 -127870167 - AluSc SINE Alu -2 307 32 2033 106 7 7 chr10 12447454 12447747 -127869018 + AluSx SINE Alu 1 293 -19 2262 104 0 13 chr10 12447822 12448138 -127868627 + AluSx SINE Alu 1 312 0 211 192 96 19 chr10 12448741 12448793 -127867972 + L2 LINE L2 3217 3272 0 1143 115 0 0 chr10 12449035 12449200 -127867565 - AluSg/x SINE Alu -14 296 132 2119 117 0 0 chr10 12449200 12449498 -127867267 - AluSx SINE Alu -14 298 1 3156 190 82 20 chr10 12449815 12450500 -127866265 + MER44D DNA MER2_type 5 603 -2 595 270 123 51 chr10 12451491 12451905 -127864860 - L1MC/D LINE L1 -721 5964 5651 290 327 65 42 chr10 12452034 12452389 -127864376 + L1M4 LINE L1 4797 5159 -987 2173 99 7 0 chr10 12452546 12452840 -127863925 + AluSg SINE Alu 1 296 -14 213 39 0 0 chr10 12452923 12452949 -127863816 + (TTTTTA)n Simple_repeat Simple_repeat 3 28 0 180 0 0 0 chr10 12453061 12453081 -127863684 + (TTTTTA)n Simple_repeat Simple_repeat 3 22 0 1848 148 0 3 chr10 12453083 12453386 -127863379 - AluSx SINE Alu -4 308 7 1953 270 117 26 chr10 12453491 12453784 -127862981 - L1MC/D LINE L1 -2210 4330 4065 2145 84 23 10 chr10 12453784 12454092 -127862673 + AluSx SINE Alu 1 312 0 324 0 0 0 chr10 12454095 12454131 -127862634 + (TA)n Simple_repeat Simple_repeat 2 37 0 1953 270 117 26 chr10 12454131 12455060 -127861705 - L1MC/D LINE L1 -2476 4064 2992 1764 113 11 4 chr10 12455108 12455374 -127861391 + AluSx SINE Alu 29 296 -16 541 245 165 40 chr10 12455374 12455647 -127861118 - L1MEc LINE L1 -3944 2634 2290 192 217 0 0 chr10 12455958 12456004 -127860761 + (TATG)n Simple_repeat Simple_repeat 2 47 0 2367 58 0 0 chr10 12456068 12456360 -127860405 - AluY SINE Alu 0 311 20 1586 105 0 4 chr10 12456506 12456735 -127860030 + AluSc SINE Alu 69 296 -13 1038 150 0 0 chr10 12456735 12456895 -127859870 + AluSg/x SINE Alu 134 293 -19 1457 201 3 3 chr10 12457039 12457323 -127859442 - AluJo SINE Alu -28 284 1 1265 262 36 40 chr10 12457481 12457657 -127859108 - L1MC4a LINE L1 -1813 5995 5820 2122 114 0 0 chr10 12457657 12457954 -127858811 - AluSx SINE Alu -15 297 1 1265 262 36 40 chr10 12457954 12458090 -127858675 - L1MC4a LINE L1 -1988 5820 5685 513 141 0 0 chr10 12458090 12458168 -127858597 - MADE1 DNA Mariner -2 78 1 1265 262 36 40 chr10 12458168 12458350 -127858415 - L1MC4a LINE L1 -2123 5685 5502 404 312 58 0 chr10 12458381 12458519 -127858246 - L1MEc LINE L1 -4927 1794 1649 719 231 35 20 chr10 12458521 12458720 -127858045 - LTR33 LTR ERVL -19 502 301 359 235 87 26 chr10 12458799 12458914 -127857851 - LTR33 LTR ERVL -377 144 23 309 26 0 0 chr10 12458996 12459034 -127857731 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 2070 103 0 0 chr10 12459037 12459319 -127857446 - AluSx SINE Alu -30 282 1 306 89 22 0 chr10 12459522 12459567 -127857198 - Alu SINE Alu -254 46 1 2191 94 0 0 chr10 12459992 12460318 -127856447 - AluSx SINE Alu 0 326 1 205 329 43 67 chr10 12460366 12460576 -127856189 + L2 LINE L2 2630 2834 -480 2318 76 0 3 chr10 12460756 12461058 -127855707 + AluSc SINE Alu 1 301 -8 218 308 33 44 chr10 12461174 12461265 -127855500 - MER5A DNA MER1_type -27 162 73 969 233 268 6 chr10 12461620 12461933 -127854832 + MSTD LTR MaLR 2 396 0 1678 153 28 17 chr10 12462786 12463073 -127853692 + AluJb SINE Alu 1 290 -22 698 218 8 8 chr10 12463491 12463624 -127853141 + FLAM_C SINE Alu 1 133 0 1639 79 96 68 chr10 12464391 12464671 -127852094 - AluSg SINE Alu -22 288 1 380 23 0 0 chr10 12464671 12464715 -127852050 - AluY SINE Alu -258 44 1 2237 76 3 0 chr10 12465155 12465444 -127851321 + AluSx SINE Alu 1 290 -22 1462 179 10 13 chr10 12466156 12466458 -127850307 - AluJo SINE Alu -11 301 1 742 115 0 0 chr10 12466481 12466585 -127850180 - AluSg/x SINE Alu -88 222 119 2475 49 0 3 chr10 12467039 12467345 -127849420 + AluY SINE Alu 1 305 -6 677 194 0 16 chr10 12467490 12467619 -127849146 + FLAM_A SINE Alu 2 128 -5 2225 87 0 13 chr10 12469306 12469616 -127847149 + AluSx SINE Alu 1 306 -6 1805 141 30 17 chr10 12469779 12470077 -127846688 - AluSx SINE Alu -10 302 1 2233 105 0 0 chr10 12470576 12470880 -127845885 + AluSg SINE Alu 1 304 -6 1715 150 7 23 chr10 12470987 12471294 -127845471 + AluSx SINE Alu 1 302 -10 730 184 95 17 chr10 12471571 12471750 -127845015 - L1MB8 LINE L1 -5 6173 5981 2228 81 3 3 chr10 12472182 12472477 -127844288 + AluSg SINE Alu 1 295 -15 2099 112 14 0 chr10 12472671 12472965 -127843800 + AluSx SINE Alu 1 298 -14 395 254 204 11 chr10 12473471 12473652 -127843113 + MER58A DNA MER1_type 1 216 -8 226 232 37 24 chr10 12473721 12473803 -127842962 + L1ME LINE L1 4408 4490 -1656 627 195 85 12 chr10 12473820 12473984 -127842781 - MER5A DNA MER1_type -11 178 3 443 238 44 103 chr10 12473986 12474259 -127842506 + L1ME LINE L1 4493 4749 -1397 1548 206 0 7 chr10 12474261 12474557 -127842208 + AluJo SINE Alu 5 298 -14 474 141 87 0 chr10 12474575 12474667 -127842098 + Tigger4(Zombi) DNA MER2_type 2632 2731 0 289 236 0 0 chr10 12474678 12474750 -127842015 + L1ME LINE L1 5383 5454 -712 243 325 89 8 chr10 12474790 12474913 -127841852 + L1ME LINE L1 5546 5678 -492 662 249 34 28 chr10 12475229 12475406 -127841359 + AluSq SINE Alu 121 298 -15 260 190 203 57 chr10 12475429 12475587 -127841178 - HAL1 LINE L1 -28 2479 2299 854 220 88 58 chr10 12475789 12476152 -127840613 - HAL1 LINE L1 -665 1842 1469 608 196 77 62 chr10 12476157 12476417 -127840348 - L1MC4 LINE L1 -3 8039 7776 2217 117 0 0 chr10 12476428 12476735 -127840030 - AluSx SINE Alu -5 307 1 2181 286 175 24 chr10 12476735 12478030 -127838735 - HAL1 LINE L1 -1015 1492 2 2434 68 0 3 chr10 12478829 12479137 -127837628 + AluY SINE Alu 1 307 -4 1564 129 39 0 chr10 12479254 12479486 -127837279 + AluSx SINE Alu 58 298 -14 863 147 123 0 chr10 12479486 12479649 -127837116 - Charlie3 DNA MER1_type -2527 183 1 1693 168 24 0 chr10 12480122 12480414 -127836351 - AluJo SINE Alu -12 300 2 2166 108 0 0 chr10 12480478 12480797 -127835968 - AluSx SINE Alu 0 312 1 27 100 0 0 chr10 12481832 12481922 -127834843 + GC_rich Low_complexity Low_complexity 1 90 0 1475 87 143 9 chr10 12484650 12484880 -127831885 - AluSg SINE Alu -49 261 1 1511 164 43 4 chr10 12485483 12485763 -127831002 + AluJb SINE Alu 10 300 -12 2157 88 7 0 chr10 12485941 12486236 -127830529 + AluY SINE Alu 2 298 -13 225 94 0 0 chr10 12486464 12486496 -127830269 + (AGGGGG)n Simple_repeat Simple_repeat 2 33 0 243 0 0 0 chr10 12488419 12488446 -127828319 + (TG)n Simple_repeat Simple_repeat 2 28 0 2030 110 10 0 chr10 12488446 12488736 -127828029 - AluSx SINE Alu -19 293 1 2162 50 28 62 chr10 12490005 12490327 -127826438 - AluY SINE Alu 0 311 1 259 262 36 48 chr10 12490386 12490470 -127826295 + MARNA DNA Mariner 268 350 -236 229 188 66 88 chr10 12490987 12491168 -127825597 + (CCAA)n Simple_repeat Simple_repeat 1 177 0 * 250 213 122 30 chr10 12491083 12491247 -127825518 + (CAGC)n Simple_repeat Simple_repeat 1 179 0 287 250 48 6 chr10 12491276 12491444 -127825321 + (CAGAC)n Simple_repeat Simple_repeat 4 178 0 * 328 171 122 37 chr10 12491351 12491515 -127825250 + (CCAA)n Simple_repeat Simple_repeat 1 178 0 202 164 90 30 chr10 12491542 12491609 -127825156 + (CCAA)n Simple_repeat Simple_repeat 3 73 0 359 185 140 13 chr10 12491620 12491777 -127824988 + (CAGC)n Simple_repeat Simple_repeat 1 177 0 295 290 69 8 chr10 12492852 12492983 -127823782 + MER5A DNA MER1_type 1 139 -50 351 336 52 9 chr10 12493065 12493181 -127823584 + L2 LINE L2 3148 3268 -4 287 257 246 38 chr10 12493465 12493753 -127823012 - L2 LINE L2 -28 3244 2897 274 244 165 63 chr10 12493854 12493981 -127822784 - L2 LINE L2 -3 3310 3171 339 259 51 19 chr10 12494250 12494408 -127822357 + (CTATA)n Simple_repeat Simple_repeat 4 166 0 354 237 43 11 chr10 12494985 12495078 -127821687 - MLT1I LTR MaLR 0 409 314 230 294 0 0 chr10 12495379 12495430 -127821335 - L2 LINE L2 -26 3246 3196 2497 226 89 50 chr10 12495553 12496271 -127820494 + MER63C DNA MER1_type 1 762 -298 2182 109 13 7 chr10 12496271 12496575 -127820190 + AluSx SINE Alu 1 306 -6 2497 226 89 50 chr10 12496575 12496743 -127820022 + MER63C DNA MER1_type 762 922 -8 337 301 23 0 chr10 12497160 12497333 -127819432 + G-rich Low_complexity Low_complexity 2 178 0 * 407 294 24 0 chr10 12497276 12497446 -127819319 + (GGATG)n Simple_repeat Simple_repeat 4 177 0 399 278 122 56 chr10 12498345 12498525 -127818240 - MIR SINE MIR -35 227 36 868 153 0 106 chr10 12499694 12499883 -127816882 + AluJb SINE Alu 5 173 -139 1591 237 125 76 chr10 12499896 12500059 -127816706 + L1MC4 LINE L1 6595 6749 -1293 1371 196 94 0 chr10 12500059 12500324 -127816441 + AluJb SINE Alu 1 290 -22 1591 237 125 76 chr10 12500324 12500809 -127815956 + L1MC4 LINE L1 6749 7209 -833 2280 93 0 0 chr10 12500809 12501109 -127815656 + AluY SINE Alu 1 300 -11 1591 237 125 76 chr10 12501109 12501275 -127815490 + L1MC4 LINE L1 7209 7365 -677 2053 123 7 7 chr10 12501275 12501583 -127815182 + AluSx SINE Alu 1 308 -4 1591 237 125 76 chr10 12501583 12501775 -127814990 + L1MC4 LINE L1 7365 7775 -267 429 252 27 0 chr10 12501893 12502004 -127814761 + L1MC4 LINE L1 7778 7891 -151 243 317 12 0 chr10 12502157 12502239 -127814526 - MIR SINE MIR -110 152 70 2210 98 7 0 chr10 12502386 12502681 -127814084 + AluSx SINE Alu 1 297 -15 878 322 38 25 chr10 12504041 12504169 -127812596 - MLT1J LTR MaLR -30 481 356 1594 215 65 0 chr10 12504169 12504494 -127812271 + MER7A DNA MER2_type 1 344 -2 878 322 38 25 chr10 12504494 12504731 -127812034 - MLT1J LTR MaLR -155 356 111 2228 71 0 0 chr10 12504818 12505138 -127811627 - AluY SINE Alu 0 320 1 198 0 0 0 chr10 12505307 12505329 -127811436 + (A)n Simple_repeat Simple_repeat 1 22 0 1782 136 0 4 chr10 12505332 12505604 -127811161 - AluSx SINE Alu -37 275 5 4156 149 63 23 chr10 12507565 12508021 -127808744 - L1PA15 LINE L1 -3 6162 5725 2282 71 7 3 chr10 12508021 12508318 -127808447 - AluY SINE Alu -13 298 1 2043 113 7 3 chr10 12508318 12508609 -127808156 - AluSq SINE Alu -12 301 9 4156 149 63 23 chr10 12508609 12508965 -127807800 - L1PA15 LINE L1 -439 5726 5317 23 0 0 0 chr10 12509150 12509173 -127807592 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr10 12509444 12509474 -127807291 + AT_rich Low_complexity Low_complexity 1 30 0 412 155 14 0 chr10 12509591 12509662 -127807103 + AluS SINE Alu 6 77 -235 296 67 22 0 chr10 12509792 12509837 -127806928 + AluSp/q SINE Alu 247 292 -11 197 395 42 17 chr10 12511385 12511504 -127805261 - MIR SINE MIR -29 233 112 2150 82 27 10 chr10 12511934 12512226 -127804539 - AluSc SINE Alu -12 297 1 2232 85 10 0 chr10 12512610 12512915 -127803850 + AluSg SINE Alu 1 308 -2 220 154 0 0 chr10 12514122 12514161 -127802604 + MER5A DNA MER1_type 68 106 -83 205 197 28 70 chr10 12514157 12514228 -127802537 - MER5A DNA MER1_type -114 75 8 * 189 277 46 0 chr10 12514262 12514327 -127802438 + L2 LINE L2 2992 3059 -213 234 0 0 0 chr10 12514363 12514389 -127802376 + (CA)n Simple_repeat Simple_repeat 1 26 0 1240 274 125 49 chr10 12515132 12515421 -127801344 + L1MD2 LINE L1 4058 4324 -1822 2115 122 6 6 chr10 12515421 12515732 -127801033 + AluSx SINE Alu 1 311 -1 1240 274 125 49 chr10 12515732 12516027 -127800738 + L1MD2 LINE L1 4324 4595 -1551 2145 104 0 0 chr10 12516027 12516315 -127800450 - AluSx SINE Alu -24 288 1 1240 274 125 49 chr10 12516315 12516688 -127800077 + L1MD2 LINE L1 4595 5089 -1057 285 111 37 0 chr10 12516693 12516747 -127800018 - Alu SINE Alu -2 300 245 1062 101 0 0 chr10 12516854 12517003 -127799762 + AluY SINE Alu 147 295 -16 1428 261 11 13 chr10 12517005 12517377 -127799388 + L1MD2 LINE L1 5320 5690 -669 1286 188 149 4 chr10 12517410 12517671 -127799094 + AluJb SINE Alu 1 299 -3 2095 117 7 0 chr10 12517671 12517969 -127798796 + AluSx SINE Alu 1 300 -12 1252 141 0 0 chr10 12518029 12518214 -127798551 + AluSx SINE Alu 3 187 -125 1034 279 117 31 chr10 12518273 12518893 -127797872 + L1MD2 LINE L1 5662 6344 -15 2387 52 0 43 chr10 12518893 12519217 -127797548 - AluY SINE Alu -1 310 1 1527 186 3 14 chr10 12520823 12521119 -127795646 + AluJb SINE Alu 5 297 -15 408 312 110 9 chr10 12521126 12521344 -127795421 - LTR16A LTR ERVL -148 302 63 261 328 39 23 chr10 12521433 12521561 -127795204 + L2 LINE L2 3173 3302 -11 2017 113 10 3 chr10 12522455 12522756 -127794009 + AluSq SINE Alu 2 304 -9 2317 89 7 0 chr10 12522777 12523081 -127793684 + AluSc SINE Alu 1 306 -3 489 255 94 26 chr10 12523655 12523704 -127793061 - MIR SINE MIR -2 260 216 2508 57 0 7 chr10 12523704 12524003 -127792762 + AluY SINE Alu 1 297 -14 489 255 94 26 chr10 12524003 12524145 -127792620 - MIR SINE MIR -46 216 56 185 283 0 0 chr10 12524956 12525002 -127791763 - MIR SINE MIR -20 242 197 378 244 71 31 chr10 12525039 12525166 -127791599 + L2 LINE L2 3137 3268 -4 2179 128 0 0 chr10 12525213 12525519 -127791246 + AluSx SINE Alu 1 306 -6 2276 68 17 10 chr10 12525586 12525878 -127790887 - AluY SINE Alu -17 294 1 1310 100 58 0 chr10 12526048 12526238 -127790527 + Tigger2a DNA MER2_type 1 201 -233 864 238 6 0 chr10 12526239 12526411 -127790354 - AluJb SINE Alu -2 310 138 927 150 48 0 chr10 12526415 12526582 -127790183 + Tigger2a DNA MER2_type 209 383 -61 2294 99 23 0 chr10 12526583 12526885 -127789880 + AluSq SINE Alu 1 309 -4 2226 112 3 0 chr10 12527322 12527618 -127789147 + AluSx SINE Alu 1 297 -15 197 283 0 0 chr10 12527684 12527730 -127789035 - MIR SINE MIR -20 242 197 402 234 70 31 chr10 12527765 12527893 -127788872 + L2 LINE L2 3136 3268 -4 2069 111 4 0 chr10 12527940 12528251 -127788514 + AluSx SINE Alu 1 312 0 1918 133 24 3 chr10 12528305 12528598 -127788167 + AluSx SINE Alu 6 304 -8 1361 86 56 5 chr10 12528824 12529021 -127787744 + Tigger2a DNA MER2_type 1 207 -227 808 219 7 19 chr10 12529021 12529215 -127787550 - AluJb SINE Alu 0 321 130 1068 166 44 48 chr10 12529215 12529375 -127787390 + Tigger2a DNA MER2_type 207 367 -2341 2211 100 3 0 chr10 12529375 12529666 -127787099 + AluSx SINE Alu 1 292 -20 1068 166 44 48 chr10 12529666 12529734 -127787031 + Tigger2a DNA MER2_type 367 434 0 2415 64 0 0 chr10 12531109 12531404 -127785361 - AluY SINE Alu -16 295 1 248 53 26 0 chr10 12531826 12531864 -127784901 + (CAAAAA)n Simple_repeat Simple_repeat 3 41 0 228 224 20 0 chr10 12532915 12532964 -127783801 - MER2 DNA MER2_type -28 317 268 1246 173 10 0 chr10 12532996 12533204 -127783561 - MER2 DNA MER2_type -135 210 1 1982 214 29 16 chr10 12533336 12533789 -127782976 + MLT1C LTR MaLR 1 459 -8 1351 158 17 4 chr10 12534312 12534546 -127782219 + AluJo SINE Alu 72 308 -4 212 302 0 0 chr10 12534598 12534651 -127782114 + MER5A DNA MER1_type 13 65 -124 612 86 9 129 chr10 12534667 12534753 -127782012 + U6 snRNA snRNA 1 71 -36 2119 116 0 20 chr10 12534753 12534887 -127781878 + AluSx SINE Alu 5 140 -172 2344 66 31 0 chr10 12534887 12535176 -127781589 + AluSg1 SINE Alu 1 298 -11 2119 116 0 20 chr10 12535176 12535344 -127781421 + AluSx SINE Alu 140 301 -11 612 86 9 129 chr10 12535344 12535373 -127781392 + U6 snRNA snRNA 71 102 -5 23 0 0 0 chr10 12535373 12535396 -127781369 + AT_rich Low_complexity Low_complexity 1 23 0 1982 140 7 7 chr10 12535783 12536075 -127780690 + AluSx SINE Alu 2 293 -19 844 173 49 43 chr10 12536077 12536239 -127780526 - FRAM SINE Alu -2 164 2 2150 98 14 0 chr10 12536317 12536604 -127780161 - AluSq SINE Alu -22 291 1 401 199 59 73 chr10 12536952 12537088 -127779677 - L2 LINE L2 -1 3312 3179 571 319 146 40 chr10 12537267 12538124 -127778641 - L2 LINE L2 -424 2890 1943 525 90 26 0 chr10 12538842 12538920 -127777845 + MADE1 DNA Mariner 1 80 0 1784 119 0 4 chr10 12539588 12539839 -127776926 + AluSx SINE Alu 49 298 -14 2542 46 0 0 chr10 12539914 12540216 -127776549 + AluY SINE Alu 1 302 -9 21 0 0 0 chr10 12540332 12540353 -127776412 + AT_rich Low_complexity Low_complexity 1 21 0 2221 87 10 0 chr10 12540355 12540644 -127776121 + AluSx SINE Alu 1 292 -20 1582 172 0 15 chr10 12540893 12541155 -127775610 + AluJo SINE Alu 52 309 -3 704 266 155 4 chr10 12541741 12541967 -127774798 + MIR SINE MIR 2 261 -1 1634 157 41 31 chr10 12541982 12542275 -127774490 + AluJo SINE Alu 1 296 -16 332 247 14 0 chr10 12542618 12542691 -127774074 + Tigger3(Golem) DNA MER2_type 1 74 -2955 921 150 14 0 chr10 12542693 12542833 -127773932 + Tigger3(Golem) DNA MER2_type 2887 3028 -1 2262 88 0 10 chr10 12543356 12543652 -127773113 + AluSc SINE Alu 1 293 -16 30 59 0 0 chr10 12544939 12544990 -127771775 + AT_rich Low_complexity Low_complexity 1 51 0 2405 99 0 0 chr10 12546071 12546375 -127770390 - AluSg SINE Alu -6 304 1 506 254 114 75 chr10 12546594 12546874 -127769891 + L2 LINE L2 3020 3310 -3 537 235 43 25 chr10 12546935 12547097 -127769668 - MER104 DNA Tc2 -13 167 3 261 274 147 11 chr10 12547128 12547223 -127769542 + L2 LINE L2 3118 3225 -88 2363 62 17 0 chr10 12547325 12547616 -127769149 - AluSp SINE Alu -17 296 1 2170 151 0 0 chr10 12547846 12548158 -127768607 + AluSx SINE Alu 1 312 0 4737 62 0 2 chr10 12548447 12549010 -127767755 - L1PA5 LINE L1 0 6154 5593 1991 114 4 0 chr10 12549110 12549382 -127767383 - AluSq SINE Alu -40 273 1 808 137 73 0 chr10 12549563 12549687 -127767078 - AluJb SINE Alu -51 261 129 1898 146 0 49 chr10 12549692 12549881 -127766884 - AluSp SINE Alu 0 313 145 2258 104 3 7 chr10 12549881 12550190 -127766575 - AluY SINE Alu -1 310 3 1898 146 0 49 chr10 12550190 12550329 -127766436 - AluSp SINE Alu -168 145 1 417 204 142 9 chr10 12550474 12550587 -127766178 - MIR SINE MIR 0 262 135 338 86 0 17 chr10 12550602 12550660 -127766105 - AluSp/q SINE Alu -1 302 246 2238 95 3 3 chr10 12550760 12551055 -127765710 + AluSg SINE Alu 1 295 -15 2071 130 7 3 chr10 12551723 12552022 -127764743 - AluSx SINE Alu -12 300 1 2254 89 0 13 chr10 12552028 12552330 -127764435 - AluSg SINE Alu -12 298 1 684 215 185 10 chr10 12552586 12552791 -127763974 + MIR SINE MIR 22 262 0 292 309 95 32 chr10 12552902 12553028 -127763737 + MIR SINE MIR 20 153 -109 232 194 45 15 chr10 12553079 12553146 -127763619 + L1ME4a LINE L1 5791 5859 -262 249 252 126 8 chr10 12553214 12553341 -127763424 + L1ME4a LINE L1 5963 6104 -17 2108 126 0 7 chr10 12553390 12553704 -127763061 + AluSx SINE Alu 1 312 0 26 0 0 0 chr10 12553745 12553771 -127762994 + AT_rich Low_complexity Low_complexity 1 26 0 334 73 16 0 chr10 12554090 12554143 -127762622 + Alu SINE Alu 247 290 -12 1860 133 16 35 chr10 12556624 12556941 -127759824 - AluY SINE Alu 0 311 1 1604 129 112 24 chr10 12557280 12557567 -127759198 + AluSx SINE Alu 1 312 0 395 268 29 36 chr10 12557667 12557805 -127758960 - MIR SINE MIR -21 241 105 27 73 0 0 chr10 12557892 12557947 -127758818 + AT_rich Low_complexity Low_complexity 1 55 0 2259 91 0 17 chr10 12558055 12558352 -127758413 - AluSg SINE Alu -18 292 1 410 278 161 85 chr10 12558734 12559004 -127757761 + L2 LINE L2 2819 3140 -173 2007 119 25 3 chr10 12559004 12559289 -127757476 - AluSp SINE Alu -22 291 1 410 278 161 85 chr10 12559289 12559478 -127757287 + L2 LINE L2 3140 3313 0 265 280 34 119 chr10 12559599 12559751 -127757014 - L1 LINE L1 -2216 3930 3809 2310 93 0 0 chr10 12559751 12560040 -127756725 - AluY SINE Alu -22 289 1 265 280 34 119 chr10 12560040 12560155 -127756610 - L1 LINE L1 -2337 3809 3686 2235 80 10 0 chr10 12560298 12560586 -127756179 - AluSp SINE Alu -19 294 4 21 0 0 0 chr10 12561084 12561105 -127755660 + AT_rich Low_complexity Low_complexity 1 21 0 2120 98 0 0 chr10 12561105 12561381 -127755384 - AluSx SINE Alu -36 276 1 2069 104 16 35 chr10 12561856 12562172 -127754593 - AluY SINE Alu -1 310 1 224 328 148 16 chr10 12562172 12562289 -127754476 + MIR SINE MIR 96 228 -34 2405 78 0 10 chr10 12562512 12562818 -127753947 - AluSq SINE Alu -10 303 1 746 293 170 24 chr10 12563291 12563797 -127752968 + L2 LINE L2 2079 2658 -656 536 314 174 19 chr10 12563850 12564223 -127752542 + L2 LINE L2 2883 3313 0 710 277 44 8 chr10 12564512 12564761 -127752004 + L2 LINE L2 1643 1900 -1414 2166 108 7 0 chr10 12565094 12565391 -127751374 + AluSx SINE Alu 1 299 -13 482 234 8 0 chr10 12566681 12566792 -127749973 - MIR SINE MIR -63 145 38 189 94 0 0 chr10 12566992 12567024 -127749741 + (A)n Simple_repeat Simple_repeat 1 32 0 1977 124 10 17 chr10 12567221 12567511 -127749254 + AluSx SINE Alu 6 293 -19 22 35 0 0 chr10 12567560 12567589 -127749176 + AT_rich Low_complexity Low_complexity 1 29 0 581 210 216 6 chr10 12567973 12568149 -127748616 + MIR SINE MIR 37 249 -13 787 133 0 42 chr10 12569827 12569947 -127746818 - FLAM_A SINE Alu -14 128 14 1779 149 11 0 chr10 12570014 12570283 -127746482 + AluSx SINE Alu 14 285 -27 240 276 40 0 chr10 12570316 12570392 -127746373 - MER116 DNA Mariner -1 79 1 1833 163 0 16 chr10 12570585 12570891 -127745874 + AluJo SINE Alu 5 305 -7 2320 115 0 0 chr10 12571047 12571352 -127745413 + AluSx SINE Alu 1 305 -7 247 317 0 0 chr10 12571449 12571553 -127745212 + CT-rich Low_complexity Low_complexity 3 106 0 286 315 0 0 chr10 12572609 12572682 -127744083 - MIR3 SINE MIR -4 204 132 288 245 85 64 chr10 12572812 12573000 -127743765 + L1ME4a LINE L1 5706 5897 -224 21 71 0 0 chr10 12573130 12573172 -127743593 + AT_rich Low_complexity Low_complexity 1 42 0 2326 110 0 0 chr10 12574005 12574314 -127742451 - AluSq SINE Alu -4 309 1 21 0 0 0 chr10 12575246 12575267 -127741498 + AT_rich Low_complexity Low_complexity 1 21 0 2452 76 0 0 chr10 12575421 12575725 -127741040 - AluY SINE Alu -7 304 1 189 318 0 0 chr10 12575977 12576021 -127740744 - L2 LINE L2 -10 3262 3219 413 254 197 0 chr10 12576208 12576330 -127740435 + MER5A DNA MER1_type 44 189 0 2110 123 0 3 chr10 12577302 12577595 -127739170 + AluSx SINE Alu 1 292 -20 249 33 0 0 chr10 12577595 12577625 -127739140 + (TA)n Simple_repeat Simple_repeat 2 31 0 845 148 0 22 chr10 12577645 12577780 -127738985 + FLAM_C SINE Alu 1 132 -1 2113 120 3 16 chr10 12578812 12579121 -127737644 + AluSx SINE Alu 1 305 -7 1027 216 0 0 chr10 12579791 12579976 -127736789 - AluJb SINE Alu -31 281 97 1882 133 4 7 chr10 12580076 12580347 -127736418 - AluSx SINE Alu -37 275 6 469 220 76 30 chr10 12580471 12580603 -127736162 + MIR SINE MIR 118 255 -7 879 99 0 25 chr10 12580603 12580724 -127736041 + FLAM_C SINE Alu 1 118 -25 1994 137 13 7 chr10 12582013 12582312 -127734453 + AluJb SINE Alu 1 301 -11 666 180 25 0 chr10 12582572 12582694 -127734071 - MER20 DNA MER1_type 0 219 95 1626 194 43 3 chr10 12582801 12582921 -127733844 + AluJo SINE Alu 2 116 -196 285 29 0 0 chr10 12582921 12582955 -127733810 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 1626 194 43 3 chr10 12582955 12583133 -127733632 + AluJo SINE Alu 116 312 0 897 162 10 76 chr10 12583141 12583338 -127733427 + FRAM SINE Alu 1 176 0 1988 157 7 0 chr10 12583345 12583644 -127733121 + AluJo SINE Alu 1 301 -11 547 319 93 42 chr10 12583644 12584073 -127732692 - L2 LINE L2 -21 3292 2842 339 299 103 0 chr10 12584191 12584298 -127732467 + L2 LINE L2 3196 3313 0 416 365 47 45 chr10 12584874 12585340 -127731425 + L2 LINE L2 2378 2844 -470 268 366 108 0 chr10 12585536 12585629 -127731136 + L2 LINE L2 3121 3223 -49 252 0 0 0 chr10 12585863 12585891 -127730874 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 1216 171 155 4 chr10 12585891 12586136 -127730629 - AluJo SINE Alu -30 282 1 26 0 0 0 chr10 12586136 12586162 -127730603 + AT_rich Low_complexity Low_complexity 1 26 0 1020 134 6 28 chr10 12587311 12587490 -127729275 - Tigger4(Zombi) DNA MER2_type 0 2731 2557 320 267 10 0 chr10 12587590 12587691 -127729074 - L1ME LINE L1 -403 5718 5617 2356 84 0 0 chr10 12587926 12588225 -127728540 - AluY SINE Alu -12 299 1 391 192 0 40 chr10 12588228 12588327 -127728438 - MER103 DNA DNA -70 96 2 816 258 105 12 chr10 12588517 12588888 -127727877 - L1MEc LINE L1 -3348 2867 2455 2391 93 3 0 chr10 12588888 12589190 -127727575 - AluSp SINE Alu -10 303 1 816 258 105 12 chr10 12589190 12589218 -127727547 - L1MEc LINE L1 -3760 2455 2431 233 216 57 0 chr10 12589430 12589518 -127727247 - L1MEc LINE L1 -3819 2396 2304 350 309 23 34 chr10 12589569 12589744 -127727021 - L1MEc LINE L1 -4107 2289 2117 1767 80 8 21 chr10 12590013 12590250 -127726515 - AluSq SINE Alu -8 305 72 10496 53 6 0 chr10 12590350 12591735 -127725030 - L1P LINE L1 -993 5153 3761 261 228 72 33 chr10 12591837 12592017 -127724748 + Charlie7 DNA MER1_type 2420 2606 -6 1000 177 0 12 chr10 12592079 12592243 -127724522 + FRAM SINE Alu 1 161 -15 242 231 70 70 chr10 12592279 12592435 -127724330 - L1ME4a LINE L1 -39 6082 5927 2216 90 3 29 chr10 12592472 12592782 -127723983 - AluSp SINE Alu -11 302 1 24 0 0 0 chr10 12593774 12593798 -127722967 + AT_rich Low_complexity Low_complexity 1 24 0 456 330 17 23 chr10 12593798 12593971 -127722794 - MIR SINE MIR -30 232 61 339 238 25 49 chr10 12594733 12594855 -127721910 - MER103 DNA DNA -45 121 3 877 92 0 0 chr10 12596590 12596699 -127720066 + AluY SINE Alu 1 109 -202 1885 32 0 0 chr10 12596799 12597018 -127719747 - AluY SINE Alu -92 219 1 294 179 45 0 chr10 12597940 12598007 -127718758 + L1ME3 LINE L1 6016 6085 -77 984 122 0 13 chr10 12598023 12598179 -127718586 + L1PA11 LINE L1 6021 6174 0 2227 124 0 13 chr10 12598310 12598624 -127718141 + AluSx SINE Alu 1 310 -2 1096 189 26 4 chr10 12598745 12599016 -127717749 + L1M4 LINE L1 5141 5417 -743 402 117 0 93 chr10 12599017 12599140 -127717625 + MER2 DNA MER2_type 3 206 -139 1456 186 45 4 chr10 12599160 12599424 -127717341 - AluJo SINE Alu -22 290 16 799 181 0 0 chr10 12600172 12600299 -127716466 + FLAM_A SINE Alu 1 127 -6 2023 77 23 0 chr10 12601276 12601535 -127715230 + AluY SINE Alu 39 303 -8 2315 98 0 7 chr10 12601541 12601846 -127714919 + AluY SINE Alu 1 303 -8 24 0 0 0 chr10 12601931 12601955 -127714810 + AT_rich Low_complexity Low_complexity 1 24 0 394 296 60 72 chr10 12602181 12602698 -127714067 + HAL1b LINE L1 119 629 -719 2230 98 10 0 chr10 12602698 12602995 -127713770 + AluSq SINE Alu 1 300 -13 486 308 28 79 chr10 12603506 12603700 -127713065 + L1 LINE L1 2153 2322 -3824 2127 133 0 7 chr10 12603700 12604008 -127712757 + AluSx SINE Alu 1 306 -6 486 308 28 79 chr10 12604008 12604167 -127712598 + L1 LINE L1 2322 2488 -3658 1602 183 0 51 chr10 12604525 12604836 -127711929 + AluJo SINE Alu 1 295 -17 359 198 124 104 chr10 12604882 12605084 -127711681 + L1 LINE L1 3074 3279 -2867 348 257 47 61 chr10 12605437 12605537 -127711228 - L2 LINE L2 -4 3309 3210 2566 66 0 0 chr10 12605537 12605839 -127710926 + AluY SINE Alu 9 310 -1 348 257 47 61 chr10 12605839 12605886 -127710879 - L2 LINE L2 -103 3210 3164 291 256 139 0 chr10 12606223 12606309 -127710456 - L2 LINE L2 -29 3284 3187 2140 95 3 0 chr10 12606342 12606625 -127710140 + AluSg SINE Alu 6 289 -21 653 299 53 77 chr10 12606645 12607020 -127709745 + L2 LINE L2 2907 3272 0 2093 114 14 0 chr10 12607188 12607478 -127709287 - AluSx SINE Alu -18 294 1 21 0 0 0 chr10 12607825 12607846 -127708919 + AT_rich Low_complexity Low_complexity 1 21 0 673 173 141 63 chr10 12608939 12609194 -127707571 + LTR48 LTR ERV1 1 275 -512 262 169 15 62 chr10 12609373 12609438 -127707327 - FRAM/FAM SINE Alu -90 76 15 2310 84 0 7 chr10 12609478 12609777 -127706988 + AluY SINE Alu 5 301 -10 1224 114 6 0 chr10 12609778 12609944 -127706821 + AluSg/x SINE Alu 131 297 -13 758 233 66 86 chr10 12609947 12610135 -127706630 - Charlie1a DNA MER1_type -2462 299 118 2283 103 3 7 chr10 12610135 12610437 -127706328 + AluSg SINE Alu 1 301 -9 758 233 66 86 chr10 12610437 12610549 -127706216 - Charlie1a DNA MER1_type -2643 118 5 226 204 0 80 chr10 12611189 12611277 -127705488 + MLT1K LTR MaLR 11 91 -497 1611 185 49 0 chr10 12611401 12611525 -127705240 + AluJo SINE Alu 1 117 -195 309 51 0 0 chr10 12611525 12611564 -127705201 + (TAAAA)n Simple_repeat Simple_repeat 5 43 0 1611 185 49 0 chr10 12611564 12611726 -127705039 + AluJo SINE Alu 117 301 -11 2310 105 3 0 chr10 12612036 12612341 -127704424 + AluSq SINE Alu 1 306 -7 2143 117 0 0 chr10 12612892 12613182 -127703583 + AluSq SINE Alu 1 290 -23 230 313 16 0 chr10 12613331 12613395 -127703370 - MIR SINE MIR -160 102 38 267 288 0 0 chr10 12613405 12613471 -127703294 - L2 LINE L2 0 3313 3248 419 242 87 27 chr10 12613508 12613657 -127703108 - L2 LINE L2 -42 3271 3114 1760 170 0 53 chr10 12613670 12613988 -127702777 + AluJb SINE Alu 1 301 -11 23 0 0 0 chr10 12613988 12614011 -127702754 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr10 12614127 12614154 -127702611 + AT_rich Low_complexity Low_complexity 1 27 0 653 75 64 0 chr10 12614263 12614357 -127702408 + MER30 DNA MER1_type 1 100 -130 1912 152 0 25 chr10 12614384 12614700 -127702065 - AluSx SINE Alu 0 312 5 1241 119 0 6 chr10 12615339 12615515 -127701250 + AluJb SINE Alu 3 177 -135 703 257 55 31 chr10 12615515 12615807 -127700958 - LTR21A LTR ERV1 -19 486 188 935 92 54 0 chr10 12615928 12616058 -127700707 + AluJb SINE Alu 172 308 -4 319 276 31 55 chr10 12616595 12616722 -127700043 + L1MC5 LINE L1 7813 7936 -25 469 241 36 9 chr10 12616944 12617056 -127699709 - L2 LINE L2 -5 3308 3194 234 331 204 25 chr10 12617237 12617486 -127699279 - L2 LINE L2 -337 2977 2774 2139 125 13 3 chr10 12617486 12617790 -127698975 + AluSq SINE Alu 1 307 -6 234 331 204 25 chr10 12617790 12617893 -127698872 - L2 LINE L2 -540 2774 2562 21 0 0 0 chr10 12618287 12618308 -127698457 + AT_rich Low_complexity Low_complexity 1 21 0 1424 131 63 4 chr10 12619100 12619352 -127697413 - LTR24B LTR ERV1 -4 572 306 428 96 0 27 chr10 12619366 12619422 -127697343 - LTR24B LTR ERV1 -503 73 17 2152 122 0 7 chr10 12619422 12619717 -127697048 - AluSx SINE Alu -18 294 2 1963 162 0 10 chr10 12619718 12620027 -127696738 - AluJo SINE Alu -6 306 1 428 96 0 27 chr10 12620027 12620041 -127696724 - LTR24B LTR ERV1 -558 18 3 599 179 31 162 chr10 12620573 12620802 -127695963 + MER21B LTR ERV1 17 215 -648 * 761 171 66 7 chr10 12620801 12620953 -127695812 + MLT1A1 LTR MaLR 205 365 0 2122 102 0 3 chr10 12621404 12621727 -127695038 + AluY SINE Alu 1 322 0 1741 132 35 0 chr10 12621747 12622005 -127694760 - AluSx SINE Alu -13 299 33 494 273 54 57 chr10 12622168 12622204 -127694561 + L1ME LINE L1 5491 5526 -595 2305 114 0 0 chr10 12622204 12622511 -127694254 + AluY SINE Alu 1 307 -4 494 273 54 57 chr10 12622511 12622545 -127694220 + L1ME LINE L1 5526 5559 -562 3264 71 5 0 chr10 12622545 12622965 -127693800 - L1PA8 LINE L1 -14 6158 5737 494 273 54 57 chr10 12622965 12623227 -127693538 + L1ME LINE L1 5559 5823 -298 2644 238 91 62 chr10 12623362 12624845 -127691920 + L1MEc LINE L1 87 1615 -4781 1586 157 17 50 chr10 12624845 12625145 -127691620 - AluJo SINE Alu -22 290 1 2644 238 91 62 chr10 12625145 12625171 -127691594 + L1MEc LINE L1 1615 1639 -4757 1719 150 4 11 chr10 12625172 12625432 -127691333 + AluSx SINE Alu 1 258 -54 2352 78 4 0 chr10 12625523 12625824 -127690941 + AluSp SINE Alu 5 306 0 1825 107 31 24 chr10 12625932 12626222 -127690543 - AluSg SINE Alu -18 292 1 2337 94 7 0 chr10 12626592 12626889 -127689876 + AluSg SINE Alu 1 299 -11 2221 114 10 0 chr10 12626919 12627217 -127689548 + AluSx SINE Alu 1 301 -11 1366 49 0 0 chr10 12627921 12628085 -127688680 - L1PA7 LINE L1 0 6154 5991 183 42 0 0 chr10 12628090 12628114 -127688651 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1801 170 0 10 chr10 12628344 12628479 -127688286 + AluJb SINE Alu 1 136 -172 2220 129 0 0 chr10 12628479 12628781 -127687984 + AluSg SINE Alu 1 302 -8 1801 170 0 10 chr10 12628781 12628956 -127687809 + AluJb SINE Alu 136 308 0 1602 218 27 0 chr10 12629331 12629662 -127687103 - MER58B DNA MER1_type -1 340 1 21 0 0 0 chr10 12629798 12629819 -127686946 + AT_rich Low_complexity Low_complexity 1 21 0 2139 126 0 3 chr10 12629900 12630201 -127686564 - AluSx SINE Alu -10 302 3 24 32 0 0 chr10 12630208 12630239 -127686526 + AT_rich Low_complexity Low_complexity 1 31 0 2078 65 8 8 chr10 12630424 12630685 -127686080 - AluSp SINE Alu -8 305 45 826 234 96 25 chr10 12630805 12631044 -127685721 - MIR SINE MIR -5 257 2 188 331 137 0 chr10 12631302 12631426 -127685339 + MIR SINE MIR 60 200 -62 1566 160 60 32 chr10 12631426 12631708 -127685057 + AluJo SINE Alu 1 290 -22 2083 103 22 0 chr10 12632042 12632313 -127684452 + AluSx SINE Alu 1 277 -35 2061 118 7 3 chr10 12632314 12632611 -127684154 + AluSx SINE Alu 7 304 -8 25 0 0 0 chr10 12633497 12633522 -127683243 + AT_rich Low_complexity Low_complexity 1 25 0 2038 107 0 58 chr10 12633571 12633881 -127682884 + AluSc SINE Alu 1 292 -17 1730 167 13 7 chr10 12633887 12634192 -127682573 + AluJb SINE Alu 1 307 -5 696 189 24 0 chr10 12634359 12634486 -127682279 + AluJo SINE Alu 6 135 -177 2152 116 0 0 chr10 12634510 12634794 -127681971 + AluSx SINE Alu 5 288 -24 25 0 0 0 chr10 12634794 12634819 -127681946 + AT_rich Low_complexity Low_complexity 1 25 0 1765 171 10 7 chr10 12634831 12635136 -127681629 + AluJo SINE Alu 3 308 -4 2005 136 7 0 chr10 12635447 12635761 -127681004 + AluSx SINE Alu 1 316 0 702 327 44 29 chr10 12635816 12635981 -127680784 + L3 LINE CR1 559 720 -857 2118 127 3 0 chr10 12635981 12636272 -127680493 - AluJb SINE Alu -20 292 1 702 327 44 29 chr10 12636272 12636562 -127680203 + L3 LINE CR1 720 1021 -556 349 235 134 0 chr10 12636569 12636688 -127680077 + L3 LINE CR1 1146 1280 -297 197 244 0 0 chr10 12636716 12636757 -127680008 - MER5C DNA MER1_type -2 322 282 2308 108 0 7 chr10 12636825 12637131 -127679634 - AluSq SINE Alu -9 304 1 268 232 37 12 chr10 12637134 12637216 -127679549 - MER5C DNA MER1_type -204 120 37 271 347 68 32 chr10 12637247 12637498 -127679267 + L3 LINE CR1 1308 1567 -10 294 123 0 35 chr10 12638533 12638590 -127678175 - Alu SINE Alu -247 55 1 347 137 68 14 chr10 12638592 12638665 -127678100 - Alu SINE Alu -5 296 220 820 174 149 6 chr10 12638667 12638693 -127678072 + AluJo SINE Alu 85 106 -206 2305 89 0 10 chr10 12638693 12638996 -127677769 + AluY SINE Alu 8 307 -4 820 174 149 6 chr10 12638996 12639130 -127677635 + AluJo SINE Alu 106 268 -44 264 30 0 0 chr10 12639138 12639171 -127677594 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 219 200 80 0 chr10 12639409 12639459 -127677306 + MIR SINE MIR 209 262 0 1689 132 8 0 chr10 12639751 12639994 -127676771 + AluSx SINE Alu 54 298 -14 1942 153 7 0 chr10 12640011 12640306 -127676459 + AluSx SINE Alu 1 297 -15 2421 96 3 0 chr10 12640308 12640611 -127676154 + AluSp SINE Alu 1 304 -9 327 98 0 0 chr10 12640816 12640923 -127675842 - Alu SINE Alu 0 347 241 23 33 0 0 chr10 12641140 12641170 -127675595 + AT_rich Low_complexity Low_complexity 1 30 0 2335 95 7 0 chr10 12641203 12641498 -127675267 - AluSg SINE Alu -13 297 1 810 156 0 16 chr10 12641697 12641825 -127674940 - FLAM_C SINE Alu -7 126 1 2179 106 0 3 chr10 12643345 12643651 -127673114 + AluSx SINE Alu 1 305 0 21 0 0 0 chr10 12643796 12643817 -127672948 + AT_rich Low_complexity Low_complexity 1 21 0 289 74 0 56 chr10 12644150 12644204 -127672561 - AluJo SINE Alu -166 136 86 2174 126 13 0 chr10 12646396 12646698 -127670067 + AluSx SINE Alu 1 306 -6 1846 101 23 23 chr10 12647002 12647284 -127669481 + AluSx SINE Alu 29 310 0 2146 90 3 10 chr10 12647319 12647609 -127669156 + AluSc SINE Alu 1 288 -21 2350 77 10 0 chr10 12647609 12647909 -127668856 + AluY SINE Alu 1 303 -8 1533 147 48 8 chr10 12648242 12648493 -127668272 + AluJo SINE Alu 27 287 -25 2524 80 0 10 chr10 12648725 12649039 -127667726 + AluSp SINE Alu 1 311 -2 300 115 115 64 chr10 12649156 12649234 -127667531 + L1MC5 LINE L1 7834 7915 -46 1589 142 0 0 chr10 12649235 12649467 -127667298 + AluJo SINE Alu 67 298 -14 708 170 44 7 chr10 12649564 12649699 -127667066 + FAM SINE Alu 1 140 -45 515 273 0 0 chr10 12649836 12649957 -127666808 + FLAM_A SINE Alu 1 121 -12 1622 164 12 0 chr10 12649967 12650223 -127666542 + AluJb SINE Alu 1 259 -53 287 243 136 21 chr10 12650229 12650369 -127666396 - MIR SINE MIR -14 248 93 31 58 0 0 chr10 12650371 12650423 -127666342 + AT_rich Low_complexity Low_complexity 1 52 0 457 250 145 30 chr10 12650789 12650989 -127665776 + MIR SINE MIR 32 254 -8 1207 153 0 0 chr10 12651050 12651233 -127665532 - AluSg/x SINE Alu 0 312 130 2135 107 3 7 chr10 12651262 12651562 -127665203 + AluSx SINE Alu 1 299 -13 180 250 0 0 chr10 12651853 12651917 -127664848 + CT-rich Low_complexity Low_complexity 4 67 0 477 219 17 17 chr10 12652380 12652499 -127664266 - L1MC5 LINE L1 -14 7947 7829 731 243 24 44 chr10 12652892 12653098 -127663667 - MER20 DNA MER1_type 0 219 18 1017 157 51 0 chr10 12653109 12653287 -127663478 - MER3 DNA MER1_type -22 187 1 2199 128 3 0 chr10 12653484 12653782 -127662983 + AluSp SINE Alu 1 299 -14 1801 166 10 3 chr10 12653826 12654116 -127662649 - AluJb SINE Alu -13 299 8 1991 143 33 0 chr10 12654132 12654433 -127662332 - AluSx SINE Alu -1 311 1 2159 101 11 0 chr10 12654842 12655120 -127661645 + AluSx SINE Alu 1 281 -31 378 0 0 0 chr10 12655120 12655162 -127661603 + (CA)n Simple_repeat Simple_repeat 1 42 0 2177 110 3 0 chr10 12655188 12655487 -127661278 + AluSq SINE Alu 1 300 -13 28 29 0 0 chr10 12655537 12655572 -127661193 + AT_rich Low_complexity Low_complexity 1 35 0 701 158 0 33 chr10 12655586 12655706 -127661059 - FLAM_C SINE Alu -15 118 3 587 236 93 6 chr10 12655844 12656005 -127660760 - MIR SINE MIR -39 223 49 2271 91 7 3 chr10 12656364 12656661 -127660104 - AluSx SINE Alu -13 299 2 2358 91 0 10 chr10 12656880 12657189 -127659576 + AluSc SINE Alu 1 306 -3 253 345 84 14 chr10 12657407 12657549 -127659216 + MIR SINE MIR 25 176 -86 25 0 0 0 chr10 12660929 12660954 -127655811 + AT_rich Low_complexity Low_complexity 1 25 0 2419 66 0 7 chr10 12661003 12661304 -127655461 + AluY SINE Alu 1 299 -12 2231 104 3 10 chr10 12661447 12661756 -127655009 + AluSx SINE Alu 6 312 0 2318 83 13 0 chr10 12662752 12663054 -127653711 + AluSq SINE Alu 1 306 -7 2170 99 7 0 chr10 12663281 12663592 -127653173 + AluSq SINE Alu 1 313 0 212 279 33 0 chr10 12663592 12663653 -127653112 + MIR SINE MIR 188 250 -12 916 281 145 24 chr10 12663856 12663975 -127652790 - L2 LINE L2 -997 2317 2214 2283 109 0 0 chr10 12663975 12664278 -127652487 + AluSq SINE Alu 1 303 -10 916 281 145 24 chr10 12664278 12664709 -127652056 - L2 LINE L2 -1100 2214 1700 1805 144 10 22 chr10 12664773 12664951 -127651814 - AluSx SINE Alu -3 309 135 1979 137 3 7 chr10 12664951 12665251 -127651514 - AluSx SINE Alu -13 299 1 1805 144 10 22 chr10 12665251 12665385 -127651380 - AluSx SINE Alu -177 135 1 460 287 65 19 chr10 12665391 12665607 -127651158 - L2 LINE L2 -1884 1430 1205 2030 96 26 33 chr10 12665607 12665749 -127651016 + AluSx SINE Alu 1 142 -170 2019 134 7 3 chr10 12665749 12666041 -127650724 + AluSx SINE Alu 4 296 -16 2030 96 26 33 chr10 12666041 12666200 -127650565 + AluSx SINE Alu 142 300 -12 487 114 0 0 chr10 12666500 12666570 -127650195 + AluSg/x SINE Alu 198 267 -45 1727 91 8 25 chr10 12666570 12666811 -127649954 - AluSg SINE Alu -73 237 1 2590 64 0 3 chr10 12666823 12667135 -127649630 - AluY SINE Alu 0 311 1 2048 126 11 0 chr10 12667202 12667488 -127649277 - AluSx SINE Alu -23 289 1 2275 112 0 3 chr10 12668165 12668468 -127648297 - AluSx SINE Alu -10 302 1 2183 118 0 0 chr10 12669038 12669325 -127647440 - AluSx SINE Alu -25 287 1 2238 106 0 3 chr10 12669564 12669866 -127646899 - AluSx SINE Alu -11 301 1 2449 68 0 16 chr10 12670171 12670482 -127646283 + AluY SINE Alu 5 310 -1 1810 135 10 30 chr10 12670666 12670963 -127645802 + MER47A DNA MER2_type 1 291 -75 1156 105 58 0 chr10 12670963 12671154 -127645611 - L1PA11 LINE L1 -1 6173 5972 2238 76 4 0 chr10 12671160 12671436 -127645329 - AluY SINE Alu -3 308 32 280 294 103 8 chr10 12671600 12671726 -127645039 + MIR SINE MIR 78 215 -47 1732 145 7 38 chr10 12671885 12672175 -127644590 + AluJb SINE Alu 1 281 -31 2017 129 3 3 chr10 12672185 12672496 -127644269 - AluY SINE Alu 0 311 1 754 171 0 0 chr10 12672699 12672822 -127643943 - AluSg/x SINE Alu -17 295 173 1474 82 0 0 chr10 12672923 12673105 -127643660 - AluY SINE Alu -129 182 1 2502 69 0 3 chr10 12673448 12673751 -127643014 + AluY SINE Alu 1 302 -9 2136 113 0 0 chr10 12673942 12674275 -127642490 + AluSx SINE Alu 1 333 0 732 174 0 0 chr10 12674509 12674624 -127642141 - FLAM_A SINE Alu -17 116 2 2188 91 7 0 chr10 12674692 12674979 -127641786 - AluY SINE Alu -21 290 2 264 75 0 0 chr10 12675213 12675253 -127641512 - Alu SINE Alu -1 298 259 227 208 0 0 chr10 12675264 12675312 -127641453 + A-rich Low_complexity Low_complexity 1 48 0 27 0 0 0 chr10 12675431 12675458 -127641307 + AT_rich Low_complexity Low_complexity 1 27 0 822 124 41 0 chr10 12675517 12675638 -127641127 + AluJo SINE Alu 12 137 -175 1095 62 0 0 chr10 12675640 12675768 -127640997 + AluY SINE Alu 5 132 -179 1163 139 6 0 chr10 12675823 12675996 -127640769 + AluSg/x SINE Alu 127 300 -12 1380 132 71 5 chr10 12676046 12676258 -127640507 - AluSg/x SINE Alu -11 299 74 1240 138 14 9 chr10 12676984 12677202 -127639563 + AluSp SINE Alu 86 304 -9 184 315 182 14 chr10 12677234 12677377 -127639388 - MIR SINE MIR -93 169 3 * 215 254 60 0 chr10 12677377 12677435 -127639330 + L2 LINE L2 2071 2132 -1182 1953 124 3 7 chr10 12677484 12677783 -127638982 - AluSx SINE Alu -14 298 1 2097 120 7 0 chr10 12677786 12678086 -127638679 - AluSg SINE Alu -8 302 1 242 116 14 43 chr10 12678086 12678155 -127638610 + (TC)n Simple_repeat Simple_repeat 2 68 0 1276 225 93 25 chr10 12678157 12678522 -127638243 + MLT1F1 LTR MaLR 177 566 -1 1908 157 0 0 chr10 12678553 12678852 -127637913 + AluJo SINE Alu 1 299 -13 696 206 22 22 chr10 12679011 12679147 -127637618 - AluJo SINE Alu -176 136 1 1996 122 0 7 chr10 12679163 12679467 -127637298 - AluSx SINE Alu 0 312 11 1241 269 219 21 chr10 12679808 12679912 -127636853 - L2 LINE L2 -1691 1623 1541 2261 99 0 6 chr10 12679912 12680224 -127636541 + AluSq SINE Alu 1 310 -3 1241 269 219 21 chr10 12680224 12680799 -127635966 - L2 LINE L2 -1773 1541 809 852 230 61 90 chr10 12680850 12681140 -127635625 + L1MC4a LINE L1 5458 5736 -2072 2320 68 3 10 chr10 12681140 12681448 -127635317 + AluY SINE Alu 1 306 -5 852 230 61 90 chr10 12681448 12681536 -127635229 + L1MC4a LINE L1 5736 5825 -1983 1146 167 0 10 chr10 12681539 12681731 -127635034 + AluJo SINE Alu 1 190 -122 909 161 12 0 chr10 12682718 12682879 -127633886 + AluSq SINE Alu 135 297 -16 1823 104 49 36 chr10 12682914 12683221 -127633544 - AluSq SINE Alu -2 311 1 365 345 10 24 chr10 12683239 12683448 -127633317 - L2 LINE L2 -2164 1150 945 1934 101 27 20 chr10 12683467 12683605 -127633160 + AluSx SINE Alu 1 137 -175 1929 130 7 3 chr10 12683605 12683898 -127632867 + AluSx SINE Alu 4 297 -15 1934 101 27 20 chr10 12683898 12684056 -127632709 + AluSx SINE Alu 137 299 -13 604 312 42 17 chr10 12684211 12684448 -127632317 + MIR SINE MIR 20 262 0 1642 137 59 4 chr10 12684634 12684931 -127631834 + AluSq SINE Alu 1 312 0 210 345 175 26 chr10 12685045 12685239 -127631526 + L2 LINE L2 2755 2977 -337 2209 77 25 0 chr10 12685420 12685706 -127631059 + AluSg SINE Alu 1 293 -17 2461 55 3 3 chr10 12685909 12686220 -127630545 + AluY SINE Alu 1 311 0 1700 147 0 38 chr10 12686229 12686521 -127630244 - AluJb SINE Alu -31 281 1 347 303 200 6 chr10 12686680 12686845 -127629920 - MIR SINE MIR -47 215 19 2154 79 0 0 chr10 12686970 12687250 -127629515 + AluY SINE Alu 32 311 0 194 274 48 48 chr10 12688558 12688642 -127628123 - MIR SINE MIR -86 176 93 221 337 6 25 chr10 12690024 12690187 -127626578 + CT-rich Low_complexity Low_complexity 5 164 0 420 138 0 58 chr10 12690657 12690690 -127626075 - AluSp SINE Alu -147 166 133 1891 130 7 7 chr10 12690690 12690989 -127625776 - AluSx SINE Alu -13 299 1 420 138 0 58 chr10 12690989 12691042 -127625723 - AluSp SINE Alu -180 133 85 28 29 0 0 chr10 12693212 12693247 -127623518 + AT_rich Low_complexity Low_complexity 1 35 0 1437 130 79 7 chr10 12693313 12693590 -127623175 - AluSg SINE Alu 0 300 4 243 88 0 0 chr10 12693928 12693962 -127622803 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 722 57 0 71 chr10 12694227 12694368 -127622397 - AluSc SINE Alu -6 303 173 356 288 10 35 chr10 12694518 12694768 -127621997 + CT-rich Low_complexity Low_complexity 1 243 0 1966 92 6 63 chr10 12697663 12697979 -127618786 + AluY SINE Alu 1 298 -13 1032 174 85 9 chr10 12698024 12698236 -127618529 + AluJb SINE Alu 3 230 -82 180 200 0 0 chr10 12699071 12699111 -127617654 + A-rich Low_complexity Low_complexity 3 42 0 1479 180 24 7 chr10 12699388 12699683 -127617082 - AluJo SINE Alu -12 300 1 2147 117 0 0 chr10 12699829 12700129 -127616636 + AluSx SINE Alu 1 300 -12 270 0 0 0 chr10 12700796 12700826 -127615939 + (TG)n Simple_repeat Simple_repeat 1 30 0 1756 150 7 7 chr10 12701001 12701294 -127615471 - AluJo SINE Alu -19 293 1 1208 286 198 7 chr10 12701294 12701861 -127614904 + L2 LINE L2 1033 1707 -1607 1109 114 12 0 chr10 12701861 12702028 -127614737 + AluSx SINE Alu 1 169 -143 404 116 14 0 chr10 12702174 12702243 -127614522 + AluS SINE Alu 230 299 -10 2011 113 0 0 chr10 12702434 12702761 -127614004 + AluSx SINE Alu 1 327 0 545 129 35 0 chr10 12703163 12703248 -127613517 + FLAM_C SINE Alu 24 111 -32 216 0 0 0 chr10 12703295 12703319 -127613446 + (A)n Simple_repeat Simple_repeat 1 24 0 1988 123 0 23 chr10 12703319 12703621 -127613144 + AluSx SINE Alu 6 300 -12 1812 161 0 13 chr10 12703623 12703933 -127612832 + AluJb SINE Alu 1 306 -6 1933 147 10 0 chr10 12703933 12704233 -127612532 + AluSx SINE Alu 1 303 -9 607 103 0 0 chr10 12704244 12704322 -127612443 + U6 snRNA snRNA 1 78 -29 2181 123 0 0 chr10 12704393 12704695 -127612070 + AluSx SINE Alu 1 302 -10 834 195 61 6 chr10 12704697 12704861 -127611904 + AluSg/x SINE Alu 137 309 -3 503 185 167 0 chr10 12705082 12705190 -127611575 - MER96 DNA MER1_type? 0 175 50 1911 130 3 13 chr10 12705227 12705526 -127611239 + AluSx SINE Alu 1 296 -16 2346 46 0 0 chr10 12705528 12705813 -127610952 + AluY SINE Alu 1 285 -26 342 0 0 0 chr10 12705813 12705851 -127610914 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 2140 101 3 0 chr10 12706019 12706315 -127610450 + AluSx SINE Alu 1 297 -15 432 130 0 0 chr10 12706513 12706582 -127610183 + AluS SINE Alu 233 301 -8 1612 175 20 0 chr10 12706678 12706970 -127609795 - AluJo SINE Alu -14 298 1 2087 126 0 0 chr10 12707116 12707417 -127609348 + AluSx SINE Alu 1 301 -11 198 0 0 0 chr10 12708082 12708104 -127608661 + (TG)n Simple_repeat Simple_repeat 1 22 0 1756 150 7 7 chr10 12708280 12708573 -127608192 - AluJo SINE Alu -19 293 1 1642 250 127 123 chr10 12708573 12709140 -127607625 + L2 LINE L2 1033 1596 -1718 1914 138 0 3 chr10 12709140 12709445 -127607320 + AluSx SINE Alu 1 304 -8 1642 250 127 123 chr10 12709445 12709542 -127607223 + L2 LINE L2 1596 1691 -1623 1782 150 7 26 chr10 12709542 12709849 -127606916 - AluSx SINE Alu -11 301 1 1642 250 127 123 chr10 12709849 12709863 -127606902 + L2 LINE L2 1691 1703 -1611 1180 176 30 4 chr10 12709863 12710096 -127606669 + L1MA7 LINE L1 6049 6287 -4 1642 250 127 123 chr10 12710096 12710136 -127606629 + L2 LINE L2 1703 1741 -1573 1280 122 61 65 chr10 12710136 12710298 -127606467 + MER30 DNA MER1_type 1 163 -67 2234 79 3 0 chr10 12710298 12710590 -127606175 - AluY SINE Alu -18 293 1 1280 122 61 65 chr10 12710590 12710656 -127606109 + MER30 DNA MER1_type 163 228 -2 1642 250 127 123 chr10 12710656 12710779 -127605986 + L2 LINE L2 1741 1862 -1452 195 42 0 0 chr10 12710779 12710803 -127605962 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 792 74 0 0 chr10 12710806 12710901 -127605864 - FLAM_C SINE Alu -24 119 25 1642 250 127 123 chr10 12710901 12711188 -127605577 + L2 LINE L2 1863 2268 -1046 242 229 16 0 chr10 12711289 12711350 -127605415 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 380 264 25 126 chr10 12711384 12711428 -127605337 + L1MC4 LINE L1 7826 7873 -169 1803 129 32 4 chr10 12711428 12711738 -127605027 - AluSx SINE Alu 0 318 1 380 264 25 126 chr10 12711738 12711930 -127604835 + L1MC4 LINE L1 7873 8040 -2 187 203 34 85 chr10 12712017 12712030 -127604735 + MER5A DNA MER1_type 134 146 -43 1926 131 3 7 chr10 12712030 12712335 -127604430 + AluSx SINE Alu 1 304 -8 187 203 34 85 chr10 12712335 12712380 -127604385 + MER5A DNA MER1_type 146 189 0 2030 127 0 0 chr10 12712893 12713185 -127603580 + AluSx SINE Alu 1 292 -20 2282 87 0 6 chr10 12713325 12713637 -127603128 + AluY SINE Alu 1 310 -1 2194 109 3 0 chr10 12714486 12714797 -127601968 - AluSq SINE Alu -1 312 1 1782 139 38 7 chr10 12715004 12715291 -127601474 + AluJo SINE Alu 1 296 -16 1759 114 57 0 chr10 12715476 12715739 -127601026 + AluSx SINE Alu 26 303 -9 279 207 171 64 chr10 12715758 12715898 -127600867 + L1MC4 LINE L1 7744 7898 -144 758 168 0 0 chr10 12715900 12716025 -127600740 + AluJb SINE Alu 184 308 -4 1977 176 18 18 chr10 12716103 12716137 -127600628 + L1MB7 LINE L1 5794 5827 -357 1770 160 17 0 chr10 12716137 12716425 -127600340 + AluSx SINE Alu 1 293 -19 1977 176 18 18 chr10 12716425 12716781 -127599984 + L1MB7 LINE L1 5826 6184 0 1406 198 7 4 chr10 12716795 12717073 -127599692 + AluJo SINE Alu 1 279 -33 372 43 0 0 chr10 12717073 12717119 -127599646 + (CA)n Simple_repeat Simple_repeat 1 46 0 1990 124 11 0 chr10 12717388 12717670 -127599095 - AluSx SINE Alu -27 285 1 1180 176 30 4 chr10 12717684 12717917 -127598848 + L1MA7 LINE L1 6049 6287 -4 1107 96 78 6 chr10 12717959 12718125 -127598640 + MER30 DNA MER1_type 1 178 -52 314 125 0 0 chr10 12718229 12718277 -127598488 + Alu SINE Alu 252 299 -3 1961 179 18 18 chr10 12718364 12718398 -127598367 + L1MB7 LINE L1 5794 5827 -357 1770 160 17 0 chr10 12718398 12718686 -127598079 + AluSx SINE Alu 1 293 -19 1961 179 18 18 chr10 12718686 12719042 -127597723 + L1MB7 LINE L1 5826 6184 0 355 160 0 0 chr10 12719056 12719106 -127597659 + Alu SINE Alu 1 50 -250 896 106 0 0 chr10 12719107 12719230 -127597535 + AluSg/x SINE Alu 161 283 -29 243 88 0 0 chr10 12719230 12719264 -127597501 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 2293 96 0 0 chr10 12719529 12719832 -127596933 - AluSc SINE Alu -6 303 1 1530 204 7 3 chr10 12720074 12720373 -127596392 + AluSx SINE Alu 1 300 -12 2061 84 66 0 chr10 12721414 12721701 -127595064 + AluSg SINE Alu 1 306 -4 2035 126 3 0 chr10 12721894 12722196 -127594569 + AluSx SINE Alu 1 303 -9 1104 145 0 25 chr10 12723027 12723227 -127593538 - AluSx SINE Alu -117 195 1 267 257 111 42 chr10 12723227 12723371 -127593394 + L1ME3A LINE L1 5922 6075 -95 1667 187 3 7 chr10 12723433 12723743 -127593022 - AluJo SINE Alu -3 309 1 2084 115 3 0 chr10 12723772 12724068 -127592697 + AluSx SINE Alu 6 302 -10 420 235 0 0 chr10 12724130 12724211 -127592554 - MER81 DNA DNA -33 81 1 194 241 19 19 chr10 12724495 12724549 -127592216 + L2 LINE L2 3256 3309 -4 2108 125 0 3 chr10 12725061 12725372 -127591393 + AluSq SINE Alu 4 313 0 593 195 0 8 chr10 12725400 12725518 -127591247 + L1MB5 LINE L1 6050 6166 -8 31 44 0 0 chr10 12725537 12725582 -127591183 + AT_rich Low_complexity Low_complexity 1 45 0 1352 154 135 0 chr10 12725982 12726249 -127590516 + AluJb SINE Alu 1 303 -9 746 125 0 0 chr10 12726142 12726254 -127590511 + AluJb SINE Alu 197 308 -4 430 208 21 0 chr10 12726502 12726598 -127590167 - Charlie5 DNA MER1_type -27 2585 2488 1239 101 6 0 chr10 12726598 12726776 -127589989 - AluSg/x SINE Alu -5 307 129 1682 82 0 43 chr10 12726789 12727071 -127589694 - AluY SINE Alu 0 311 42 1863 110 3 69 chr10 12727402 12727584 -127589181 - AluSx SINE Alu -14 298 144 2554 36 3 0 chr10 12727584 12727893 -127588872 - AluY SINE Alu -1 310 1 1863 110 3 69 chr10 12727893 12728028 -127588737 - AluSx SINE Alu -168 144 2 896 190 39 3 chr10 12728028 12728256 -127588509 - MER33 DNA MER1_type -259 65 1 1671 129 0 30 chr10 12728484 12728748 -127588017 + AluSx SINE Alu 1 256 -56 1815 128 0 62 chr10 12728790 12729096 -127587669 + AluSx SINE Alu 3 289 -23 506 251 157 45 chr10 12729471 12729694 -127587071 + MIR SINE MIR 15 262 0 1353 177 29 42 chr10 12729944 12730083 -127586682 + AluJb SINE Alu 1 140 -172 2189 107 0 0 chr10 12730083 12730381 -127586384 + AluSq SINE Alu 1 298 -15 1353 177 29 42 chr10 12730381 12730551 -127586214 + AluJb SINE Alu 140 306 -6 810 132 0 21 chr10 12730599 12730743 -127586022 - AluSp/q SINE Alu -6 307 167 29 70 0 0 chr10 12731824 12731881 -127584884 + GC_rich Low_complexity Low_complexity 1 57 0 1127 133 40 0 chr10 12731927 12732100 -127584665 - AluY SINE Alu -129 182 3 1573 128 163 4 chr10 12732325 12732583 -127584182 + AluSx SINE Alu 1 299 -3 24 0 0 0 chr10 12732619 12732643 -127584122 + AT_rich Low_complexity Low_complexity 1 24 0 860 171 0 74 chr10 12732938 12733114 -127583651 - AluSg/x SINE Alu -13 299 137 2311 167 18 58 chr10 12733269 12733451 -127583314 + L1MA4 LINE L1 5768 5956 -344 2136 102 0 7 chr10 12733451 12733754 -127583011 + AluSq SINE Alu 1 301 -12 2311 167 18 58 chr10 12733754 12734122 -127582643 + L1MA4 LINE L1 5956 6296 -4 1537 167 7 24 chr10 12734227 12734538 -127582227 - AluJo SINE Alu 0 306 1 21 0 0 0 chr10 12734538 12734559 -127582206 + AT_rich Low_complexity Low_complexity 1 21 0 825 174 0 0 chr10 12734566 12734698 -127582067 + FRAM SINE Alu 9 140 -36 803 169 6 38 chr10 12734711 12734894 -127581871 + AluSg/x SINE Alu 120 296 -16 203 286 96 70 chr10 12735002 12735201 -127581564 - L2 LINE L2 -5 3308 3105 1905 126 17 0 chr10 12735304 12735598 -127581167 + AluSx SINE Alu 1 299 -13 825 160 17 40 chr10 12735775 12735950 -127580815 - AluJo SINE Alu -57 255 85 363 216 82 10 chr10 12736185 12736282 -127580483 + MLT1G3 LTR MaLR 1 104 -491 440 197 210 4 chr10 12736338 12736526 -127580239 + MLT1G3 LTR MaLR 170 442 -148 1739 165 0 19 chr10 12736613 12736929 -127579836 + AluJo SINE Alu 1 310 -2 2518 39 0 13 chr10 12737108 12737419 -127579346 + AluY SINE Alu 1 307 -4 209 218 0 46 chr10 12737794 12737881 -127578884 + (CGGGG)n Simple_repeat Simple_repeat 2 84 0 494 55 96 0 chr10 12738946 12739019 -127577746 + MADE1 DNA Mariner 1 80 0 2037 107 0 0 chr10 12739089 12739379 -127577386 + AluSx SINE Alu 5 294 -18 601 84 21 0 chr10 12739875 12739970 -127576795 - AluY SINE Alu -2 309 213 988 108 0 0 chr10 12740126 12740274 -127576491 + AluSg/x SINE Alu 151 298 -14 2022 130 0 0 chr10 12740289 12740588 -127576177 + AluSx SINE Alu 1 299 -13 2361 32 0 3 chr10 12741960 12742265 -127574500 - AluY SINE Alu 0 304 1 1415 91 5 23 chr10 12742729 12742949 -127573816 + AluSg/x SINE Alu 87 302 -8 1920 74 19 11 chr10 12743063 12743333 -127573432 + L1PA8 LINE L1 5895 6166 -6 24 0 0 0 chr10 12743333 12743357 -127573408 + AT_rich Low_complexity Low_complexity 1 24 0 2046 185 5 20 chr10 12743467 12743872 -127572893 - L1PB4 LINE L1 0 6156 5758 192 217 0 0 chr10 12743882 12743928 -127572837 + (TG)n Simple_repeat Simple_repeat 1 46 0 1458 166 19 60 chr10 12744313 12744483 -127572282 - AluSx SINE Alu 0 302 149 1645 145 4 22 chr10 12744483 12744626 -127572139 - AluSx SINE Alu -37 275 138 2085 128 3 0 chr10 12744626 12744938 -127571827 - AluSq SINE Alu 0 313 1 1645 145 4 22 chr10 12744938 12745070 -127571695 - AluSx SINE Alu -174 138 5 1458 166 19 60 chr10 12745070 12745213 -127571552 - AluSx SINE Alu -153 149 2 1391 185 57 10 chr10 12745315 12745613 -127571152 - AluJb SINE Alu 0 312 1 190 269 0 0 chr10 12745679 12745731 -127571034 + MIR SINE MIR 156 207 -55 1999 120 3 0 chr10 12745733 12746017 -127570748 + AluSx SINE Alu 1 285 -27 225 83 0 0 chr10 12746017 12746053 -127570712 + (CATA)n Simple_repeat Simple_repeat 2 37 0 2049 222 67 39 chr10 12746394 12746961 -127569804 - L1ME2 LINE L1 -12 6152 5564 2085 96 0 0 chr10 12746961 12747270 -127569495 - AluSx SINE Alu 0 309 1 2049 222 67 39 chr10 12747270 12747314 -127569451 - L1ME2 LINE L1 -600 5564 5523 2195 83 0 32 chr10 12747540 12747674 -127569091 + AluSx SINE Alu 2 139 -173 2352 77 0 0 chr10 12747674 12747984 -127568781 + AluY SINE Alu 1 310 -1 2195 83 0 32 chr10 12747984 12748161 -127568604 + AluSx SINE Alu 139 303 -9 496 295 115 53 chr10 12748161 12748483 -127568282 - MER93a LTR ERV1 -60 342 1 2004 110 0 17 chr10 12748781 12749071 -127567694 - AluY SINE Alu -26 285 1 1940 137 0 0 chr10 12749072 12749371 -127567394 - AluSx SINE Alu -13 299 1 341 221 61 72 chr10 12749699 12749880 -127566885 - L1ME4a LINE L1 -16 6105 5927 869 204 57 28 chr10 12749895 12750014 -127566751 - MER20 DNA MER1_type -1 218 89 1766 178 58 76 chr10 12750014 12750464 -127566301 - LTR47B LTR ERVL 0 443 2 869 204 57 28 chr10 12750464 12750555 -127566210 - MER20 DNA MER1_type -130 89 2 261 235 61 31 chr10 12750556 12750654 -127566111 - L1ME4a LINE L1 -238 5883 5783 452 218 55 0 chr10 12750769 12750879 -127565886 - L1MB2 LINE L1 0 6171 6056 230 211 10 77 chr10 12750915 12751019 -127565746 + T-rich Low_complexity Low_complexity 6 102 0 809 89 27 0 chr10 12751134 12751246 -127565519 - AluSg/x SINE Alu -19 291 177 2078 108 7 0 chr10 12751628 12751914 -127564851 + AluSx SINE Alu 5 292 -20 1064 145 62 10 chr10 12752100 12752293 -127564472 - AluJo SINE Alu -109 203 1 267 187 45 75 chr10 12752480 12752614 -127564151 - L1ME4a LINE L1 -152 5969 5840 520 254 31 15 chr10 12752647 12752777 -127563988 - L2 LINE L2 -2 3311 3180 553 256 63 74 chr10 12752779 12752942 -127563823 - L2 LINE L2 -251 3062 2895 1703 151 7 3 chr10 12752942 12753233 -127563532 + AluJb SINE Alu 1 292 -20 553 256 63 74 chr10 12753233 12753387 -127563378 - L2 LINE L2 -418 2895 2741 631 279 113 38 chr10 12753429 12753820 -127562945 - L1ME4a LINE L1 -388 5733 5314 469 231 0 0 chr10 12753837 12753941 -127562824 + U13 snRNA snRNA 1 104 0 207 0 0 0 chr10 12754187 12754210 -127562555 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1951 114 11 0 chr10 12754219 12754492 -127562273 - AluSq SINE Alu -37 276 1 571 302 97 73 chr10 12754653 12754680 -127562085 - L1ME4a LINE L1 -812 5334 5309 2435 64 0 3 chr10 12754680 12754992 -127561773 - AluY SINE Alu 0 311 1 571 302 97 73 chr10 12754992 12755069 -127561696 - L1ME4a LINE L1 -837 5309 5235 1629 178 10 0 chr10 12755069 12755362 -127561403 - AluJb SINE Alu -13 299 4 571 302 97 73 chr10 12755362 12755577 -127561188 - L1ME4a LINE L1 -911 5235 4995 2033 128 7 0 chr10 12755577 12755875 -127560890 + AluSx SINE Alu 1 300 -12 571 302 97 73 chr10 12755875 12756057 -127560708 - L1ME4a LINE L1 -1151 4995 4819 2225 77 0 17 chr10 12756114 12756412 -127560353 - AluSg SINE Alu -15 295 3 2303 92 3 0 chr10 12756416 12756721 -127560044 - AluSp SINE Alu -7 306 1 1900 104 57 7 chr10 12756721 12757000 -127559765 - AluSc SINE Alu -15 294 1 2047 122 3 0 chr10 12757261 12757565 -127559200 - AluSx SINE Alu -7 305 1 673 278 82 11 chr10 12758403 12758684 -127558081 + HsTC2 DNA Tc2 4 304 -1594 506 196 116 32 chr10 12758666 12758855 -127557910 + HsTC2 DNA Tc2 1692 1896 -2 * 2258 74 0 7 chr10 12758953 12759251 -127557514 - AluSg SINE Alu -14 296 1 2371 81 0 0 chr10 12759477 12759786 -127556979 - AluSc SINE Alu 0 309 1 953 95 0 95 chr10 12759924 12760092 -127556673 - AluSp/q SINE Alu -4 309 158 1930 125 14 0 chr10 12760267 12760556 -127556209 - AluSx SINE Alu -19 293 1 2061 114 3 10 chr10 12760655 12760788 -127555977 + AluSx SINE Alu 2 134 -178 2087 91 40 0 chr10 12760788 12761085 -127555680 + AluSc SINE Alu 1 309 0 2061 114 3 10 chr10 12761085 12761249 -127555516 + AluSx SINE Alu 134 297 -15 259 167 21 0 chr10 12762131 12762179 -127554586 - MER112 DNA MER1_type -108 152 104 339 209 70 85 chr10 12763512 12763641 -127553124 - L1ME LINE L1 -304 5817 5691 1199 116 0 0 chr10 12765506 12765678 -127551087 - AluSq SINE Alu -8 305 134 2211 91 3 3 chr10 12765678 12765976 -127550789 - AluSc SINE Alu -11 298 1 2096 116 3 0 chr10 12766624 12766925 -127549840 + AluSx SINE Alu 1 302 -10 1112 43 7 0 chr10 12767147 12767287 -127549478 - AluY SINE Alu -6 305 165 202 266 16 16 chr10 12767421 12767485 -127549280 + GA-rich Low_complexity Low_complexity 4 67 0 1678 118 23 59 chr10 12767733 12768039 -127548726 + AluSx SINE Alu 7 301 -11 982 157 0 0 chr10 12768039 12768192 -127548573 + AluSg/x SINE Alu 132 284 -26 234 0 0 0 chr10 12768192 12768218 -127548547 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 2242 93 0 3 chr10 12768580 12768882 -127547883 - AluSx SINE Alu -11 301 1 1274 39 0 0 chr10 12768940 12769096 -127547669 - AluY SINE Alu -13 298 143 1460 223 0 13 chr10 12769224 12769534 -127547231 + AluJo SINE Alu 1 306 -6 647 74 0 11 chr10 12769534 12769629 -127547136 + (GGAA)n Simple_repeat Simple_repeat 1 94 0 2231 111 0 0 chr10 12770018 12770325 -127546440 + AluSx SINE Alu 1 307 -5 2024 116 0 3 chr10 12771104 12771397 -127545368 + AluSx SINE Alu 1 292 -20 1393 171 22 67 chr10 12771498 12771813 -127544952 - AluJo SINE Alu -11 301 1 1620 180 0 3 chr10 12771864 12772159 -127544606 - AluJo SINE Alu -18 294 1 2022 107 21 0 chr10 12773002 12773283 -127543482 + AluSx SINE Alu 1 287 -25 724 83 10 0 chr10 12773368 12773464 -127543301 + AluY SINE Alu 2 98 -213 2119 111 10 0 chr10 12773470 12773777 -127542988 + AluY SINE Alu 1 310 -1 36 23 0 0 chr10 12773778 12773821 -127542944 + AT_rich Low_complexity Low_complexity 1 43 0 1372 111 5 0 chr10 12773821 12774010 -127542755 + AluSc SINE Alu 1 190 -119 31 0 0 0 chr10 12774019 12774050 -127542715 + AT_rich Low_complexity Low_complexity 1 31 0 1627 128 6 98 chr10 12774064 12774392 -127542373 - AluSx SINE Alu -14 298 1 1453 117 0 0 chr10 12774669 12774875 -127541890 - AluSg/x SINE Alu -20 292 87 2236 89 0 0 chr10 12774928 12775220 -127541545 - AluSp SINE Alu -21 292 1 37 23 0 0 chr10 12775640 12775684 -127541081 + AT_rich Low_complexity Low_complexity 1 44 0 2087 96 3 0 chr10 12775767 12776071 -127540694 + AluSx SINE Alu 1 305 0 2000 100 4 4 chr10 12776255 12776536 -127540229 - AluSq SINE Alu -32 281 1 1424 90 33 94 chr10 12776561 12776806 -127539959 - MER30 DNA MER1_type 0 230 1 2119 66 0 69 chr10 12776814 12777134 -127539631 - AluY SINE Alu -13 298 1 372 240 0 50 chr10 12777410 12777510 -127539255 + MLT1H1 LTR MaLR 461 555 0 283 288 224 0 chr10 12777669 12777818 -127538947 + MIR SINE MIR 30 208 -54 1774 158 7 10 chr10 12777841 12778145 -127538620 - AluJb SINE Alu -9 303 1 1429 150 33 48 chr10 12778619 12778693 -127538072 - AluJb SINE Alu -7 305 231 2094 54 98 4 chr10 12778693 12778970 -127537795 - AluY SINE Alu -8 303 1 1429 150 33 48 chr10 12778970 12779168 -127537597 - AluJb SINE Alu -81 231 37 2021 129 3 0 chr10 12779248 12779558 -127537207 - AluY SINE Alu 0 311 1 2132 81 0 62 chr10 12779669 12779990 -127536775 - AluY SINE Alu -10 301 1 239 364 108 0 chr10 12780073 12780249 -127536516 + L3 LINE CR1 509 703 -874 2220 96 3 3 chr10 12780298 12780601 -127536164 - AluSc SINE Alu -6 303 1 302 343 37 0 chr10 12780604 12780738 -127536027 + L2 LINE L2 1984 2122 -1192 854 188 30 6 chr10 12780738 12780903 -127535862 + FRAM SINE Alu 1 167 -9 1551 131 62 0 chr10 12781066 12781310 -127535455 + AluSx SINE Alu 43 301 -11 1157 127 6 0 chr10 12781360 12781533 -127535232 - AluSg/x SINE Alu -12 298 125 2133 126 0 0 chr10 12781537 12781846 -127534919 - AluSx SINE Alu -3 309 1 324 294 174 38 chr10 12782067 12782332 -127534433 + L2 LINE L2 210 510 -2804 1988 116 3 32 chr10 12782452 12782763 -127534002 + AluSq SINE Alu 1 302 -11 313 247 94 88 chr10 12782884 12782996 -127533769 + L1ME4a LINE L1 5927 6042 -79 757 128 0 108 chr10 12782996 12783033 -127533732 - FLAM_A SINE Alu -169 133 94 2197 85 7 0 chr10 12783033 12783326 -127533439 + AluY SINE Alu 1 295 -16 757 128 0 108 chr10 12783326 12783436 -127533329 - FLAM_A SINE Alu -208 94 2 313 247 94 88 chr10 12783436 12783493 -127533272 + L1ME4a LINE L1 6042 6097 -24 2019 71 3 27 chr10 12783503 12783800 -127532965 - AluY SINE Alu -21 290 1 1624 156 7 10 chr10 12783929 12784217 -127532548 + AluJo SINE Alu 1 287 -25 1538 157 0 30 chr10 12785685 12785984 -127530781 + AluJo SINE Alu 7 296 -16 2022 117 0 16 chr10 12785984 12786317 -127530448 + AluSc SINE Alu 1 309 0 381 281 21 0 chr10 12786393 12786489 -127530276 + MER106A DNA MER1_type 2 99 -137 378 205 145 51 chr10 12787040 12787157 -127529608 - MER5B DNA MER1_type 0 178 51 1805 164 157 5 chr10 12787159 12787592 -127529173 - L1MB8 LINE L1 0 6178 5680 536 230 52 0 chr10 12787595 12787730 -127529035 - L1MB8 LINE L1 -588 5586 5445 565 135 58 19 chr10 12787730 12787834 -127528931 - AluJo/FRAM SINE Alu -70 242 135 2068 124 3 0 chr10 12787836 12788143 -127528622 - AluSg SINE Alu 0 310 3 327 233 12 23 chr10 12788144 12788230 -127528535 - L1MB8 LINE L1 -1184 4962 4878 277 115 77 19 chr10 12788354 12788406 -127528359 - MER5B DNA MER1_type -123 55 1 369 109 0 0 chr10 12789562 12789617 -127527148 + (TCC)n Simple_repeat Simple_repeat 2 56 0 186 313 0 45 chr10 12792391 12792458 -127524307 - L2 LINE L2 -6 3266 3203 2186 81 7 7 chr10 12792551 12792847 -127523918 - AluSc SINE Alu -13 296 1 2185 104 3 0 chr10 12793278 12793586 -127523179 - AluSx SINE Alu -3 309 1 745 182 46 36 chr10 12795673 12795931 -127520834 - L1MB4 LINE L1 -5 6175 5899 787 227 116 5 chr10 12795968 12796175 -127520590 - L1MB4 LINE L1 -390 5790 5561 2077 116 0 0 chr10 12796205 12796547 -127520218 - AluSx SINE Alu 0 343 2 638 106 163 32 chr10 12796805 12796928 -127519837 - FRAM SINE Alu -17 159 21 2027 74 35 18 chr10 12797742 12798026 -127518739 - AluSq SINE Alu -24 289 1 2174 92 0 7 chr10 12798395 12798689 -127518076 - AluSg1 SINE Alu -17 292 1 1942 129 0 35 chr10 12798789 12799100 -127517665 - AluSx SINE Alu -12 300 1 1992 109 3 3 chr10 12799561 12799876 -127516889 + AluSq SINE Alu 1 315 0 1651 164 14 7 chr10 12799887 12800174 -127516591 + AluJb SINE Alu 1 289 -23 520 163 16 10 chr10 12800178 12800424 -127516341 + AluJb SINE Alu 3 298 -14 314 91 0 26 chr10 12800450 12800511 -127516254 + AluSp SINE Alu 1 38 -262 1755 89 4 0 chr10 12800511 12800747 -127516018 + AluSp SINE Alu 71 307 -6 2100 124 0 0 chr10 12800847 12801146 -127515619 + AluSx SINE Alu 1 299 -13 2177 108 0 0 chr10 12801365 12801660 -127515105 + AluSx SINE Alu 1 295 -17 2294 84 0 0 chr10 12801763 12802072 -127514693 + AluY SINE Alu 1 309 -2 232 310 46 11 chr10 12805242 12805329 -127511436 + MIR3 SINE MIR 104 193 -15 1784 144 54 30 chr10 12805573 12805906 -127510859 - MER2 DNA MER2_type -3 341 1 475 146 49 0 chr10 12805908 12805990 -127510775 - Tigger4(Zombi) DNA MER2_type 0 2731 2646 * 1190 188 39 8 chr10 12805987 12806221 -127510544 - Tigger4(Zombi) DNA MER2_type -2288 443 203 934 132 0 0 chr10 12806221 12806357 -127510408 + AluJo SINE Alu 1 136 -176 1652 168 30 3 chr10 12806381 12806678 -127510087 + AluSx SINE Alu 1 305 -7 1064 191 44 10 chr10 12806679 12806883 -127509882 - Tigger4(Zombi) DNA MER2_type -2520 211 1 258 299 72 21 chr10 12807090 12807187 -127509578 + MER5A DNA MER1_type 67 168 -21 231 346 48 10 chr10 12807098 12807202 -127509563 - MER5B DNA MER1_type -64 114 7 * 2249 98 0 0 chr10 12807258 12807563 -127509202 - AluSx SINE Alu -7 305 1 410 252 83 54 chr10 12808369 12808568 -127508197 - L1ME4a LINE L1 -261 5860 5649 1941 107 16 44 chr10 12808568 12808887 -127507878 - AluSx SINE Alu -2 310 1 410 252 83 54 chr10 12808887 12808965 -127507800 - L1ME4a LINE L1 -472 5649 5575 317 238 0 111 chr10 12809755 12809881 -127506884 + L1ME3A LINE L1 5988 6099 -71 2162 104 10 0 chr10 12811146 12811454 -127505311 - AluSx SINE Alu -1 311 1 1554 176 0 21 chr10 12811570 12811860 -127504905 - AluJb SINE Alu -24 288 5 225 237 66 40 chr10 12811891 12811967 -127504798 - HAL1 LINE L1 -9 2498 2421 796 238 18 35 chr10 12812008 12812235 -127504530 - HAL1 LINE L1 -846 1661 1439 394 196 29 80 chr10 12812256 12812394 -127504371 - HAL1 LINE L1 -1140 1367 1237 1171 154 103 26 chr10 12812402 12812635 -127504130 + AluJb SINE Alu 1 251 -61 2011 89 0 35 chr10 12812971 12813284 -127503481 + AluSc SINE Alu 1 302 -7 482 287 63 30 chr10 12813298 12813535 -127503230 - L2 LINE L2 -87 3226 2982 2154 96 3 0 chr10 12813645 12813937 -127502828 - AluSq SINE Alu -20 293 1 2250 73 14 0 chr10 12814426 12814715 -127502050 - AluY SINE Alu -13 298 6 2127 123 0 0 chr10 12815138 12815440 -127501325 - AluSx SINE Alu -10 302 1 2171 78 3 10 chr10 12815633 12815958 -127500807 + AluY SINE Alu 1 311 0 584 200 17 8 chr10 12816149 12816269 -127500496 + FLAM_A SINE Alu 14 134 -8 765 119 0 0 chr10 12816728 12816865 -127499900 + AluSc SINE Alu 174 310 0 24 53 0 0 chr10 12817063 12817101 -127499664 + AT_rich Low_complexity Low_complexity 1 38 0 1877 126 17 7 chr10 12817103 12817396 -127499369 + AluSx SINE Alu 1 296 -16 187 369 46 15 chr10 12817767 12817897 -127498868 - L2 LINE L2 -911 2403 2270 2082 66 13 33 chr10 12818401 12818706 -127498059 - AluSx SINE Alu -13 299 1 1957 105 14 3 chr10 12819411 12819706 -127497059 + AluSx SINE Alu 1 298 -14 919 175 113 16 chr10 12821208 12821465 -127495300 + L1MA8 LINE L1 6000 6281 -10 2311 58 0 7 chr10 12821913 12822208 -127494557 - AluY SINE Alu -18 293 1 342 129 0 48 chr10 12822255 12822317 -127494448 - Alu SINE Alu -11 290 232 34 24 0 0 chr10 12822317 12822358 -127494407 + AT_rich Low_complexity Low_complexity 1 41 0 720 224 213 12 chr10 12823859 12824113 -127492652 + L2 LINE L2 3008 3312 -1 2233 89 3 0 chr10 12824348 12824651 -127492114 - AluY SINE Alu -6 305 2 2094 128 3 0 chr10 12824652 12824957 -127491808 - AluSx SINE Alu -6 306 1 1501 160 19 4 chr10 12825337 12825593 -127491172 - AluSx SINE Alu -50 262 3 431 198 0 0 chr10 12825718 12825799 -127490966 + AluJ/FRAM SINE Alu 219 299 -13 711 168 0 0 chr10 12825953 12826066 -127490699 + AluSq/x SINE Alu 2 114 -198 1184 112 0 103 chr10 12826066 12826290 -127490475 - AluSg SINE Alu -109 201 1 27 0 0 0 chr10 12826290 12826317 -127490448 + AT_rich Low_complexity Low_complexity 1 27 0 786 233 99 15 chr10 12826390 12826592 -127490173 + MLT1J LTR MaLR 1 219 -292 248 181 48 72 chr10 12826651 12826734 -127490031 + MLT1-int LTR MaLR 1 81 -1290 2035 129 0 0 chr10 12826991 12827286 -127489479 + AluSx SINE Alu 1 295 -17 1506 143 10 57 chr10 12827942 12828256 -127488509 + AluJo SINE Alu 1 299 -13 999 103 0 0 chr10 12829276 12829412 -127487353 + AluSq/x SINE Alu 1 136 -176 2277 74 3 0 chr10 12829412 12829745 -127487020 + AluSp SINE Alu 1 334 0 2021 83 0 43 chr10 12829752 12830053 -127486712 + AluSg SINE Alu 9 296 -14 210 266 213 21 chr10 12830351 12830445 -127486320 - L2 LINE L2 -44 3228 3117 1471 109 0 4 chr10 12830592 12830788 -127485977 - AluSg/x SINE Alu 0 312 116 216 0 0 0 chr10 12830788 12830812 -127485953 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1471 109 0 4 chr10 12830812 12830844 -127485921 - AluSg/x SINE Alu -196 116 85 1722 90 0 71 chr10 12830847 12830963 -127485802 - AluSp SINE Alu -66 247 124 2445 63 0 0 chr10 12830963 12831263 -127485502 - AluY SINE Alu -11 300 1 1722 90 0 71 chr10 12831263 12831412 -127485353 - AluSp SINE Alu -189 124 1 953 112 0 14 chr10 12831412 12831555 -127485210 - AluSq/x SINE Alu -172 141 1 1830 139 13 3 chr10 12832142 12832445 -127484320 - AluSx SINE Alu -1 311 6 1544 102 0 0 chr10 12833053 12833258 -127483507 - AluSc SINE Alu -104 205 1 1004 96 0 0 chr10 12833258 12833393 -127483372 - AluSq/x SINE Alu -177 135 1 1957 125 6 19 chr10 12833727 12834038 -127482727 - AluSq SINE Alu 0 313 7 1863 86 0 4 chr10 12834216 12834460 -127482305 - AluSq SINE Alu -57 256 14 339 315 21 55 chr10 12834492 12834533 -127482232 + HAL1 LINE L1 1526 1567 -940 1575 159 35 21 chr10 12834533 12834822 -127481943 - AluJo SINE Alu -19 293 1 339 315 21 55 chr10 12834822 12835018 -127481747 + HAL1 LINE L1 1567 1755 -752 2133 104 0 3 chr10 12835043 12835332 -127481433 + AluSx SINE Alu 1 288 -24 32 0 0 0 chr10 12835333 12835365 -127481400 + AT_rich Low_complexity Low_complexity 1 32 0 482 153 0 24 chr10 12836366 12836451 -127480314 - FLAM_A SINE Alu -3 139 57 2213 122 0 0 chr10 12836597 12836909 -127479856 + AluSx SINE Alu 1 312 0 208 265 0 0 chr10 12837069 12837118 -127479647 - L2 LINE L2 -3 3269 3221 2219 99 7 0 chr10 12837598 12837900 -127478865 + AluSg SINE Alu 1 304 -6 840 114 15 0 chr10 12838030 12838161 -127478604 - AluSc SINE Alu -2 307 175 439 321 78 5 chr10 12838161 12838243 -127478522 + L3 LINE CR1 1370 1445 -132 1924 143 0 3 chr10 12838243 12838551 -127478214 - AluSx SINE Alu -5 307 1 439 321 78 5 chr10 12838551 12838661 -127478104 + L3 LINE CR1 1445 1576 -1 1917 144 7 0 chr10 12839252 12839551 -127477214 + AluSx SINE Alu 1 301 -11 679 138 0 0 chr10 12839570 12839664 -127477101 + FLAM_C SINE Alu 25 118 -25 33 25 0 0 chr10 12839664 12839704 -127477061 + AT_rich Low_complexity Low_complexity 1 40 0 2189 102 7 0 chr10 12839719 12840024 -127476741 + AluSc SINE Alu 1 307 -2 2159 89 0 16 chr10 12840226 12840550 -127476215 - AluY SINE Alu 0 319 1 371 269 0 0 chr10 12840554 12840632 -127476133 - AluYb8 SINE Alu -11 297 220 2199 101 7 0 chr10 12840759 12841055 -127475710 + AluSg SINE Alu 13 310 0 1944 141 0 3 chr10 12841275 12841572 -127475193 + AluJo SINE Alu 1 296 -16 307 217 90 107 chr10 12841766 12841974 -127474791 - L1ME4a LINE L1 -50 6071 5861 2168 102 7 0 chr10 12841974 12842278 -127474487 - AluSg SINE Alu 0 310 5 2241 95 3 0 chr10 12842281 12842585 -127474180 - AluSp SINE Alu -8 305 1 307 217 90 107 chr10 12842585 12842616 -127474149 - L1ME4a LINE L1 -262 5859 5829 2212 92 0 3 chr10 12842616 12842910 -127473855 - AluSc SINE Alu -16 293 1 307 217 90 107 chr10 12842910 12842964 -127473801 - L1ME4a LINE L1 -292 5829 5778 333 0 0 0 chr10 12842966 12843003 -127473762 + (TG)n Simple_repeat Simple_repeat 2 38 0 2246 100 3 0 chr10 12843621 12843930 -127472835 - AluSp SINE Alu 0 313 4 342 247 50 88 chr10 12844020 12844166 -127472599 + MER5A DNA MER1_type 8 147 -42 2342 93 0 0 chr10 12844166 12844477 -127472288 - L1PA7 LINE L1 -2 6152 5842 342 247 50 88 chr10 12844477 12844512 -127472253 + MER5A DNA MER1_type 147 182 -7 222 62 0 0 chr10 12844561 12844593 -127472172 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1734 131 0 54 chr10 12844596 12844893 -127471872 - AluSx SINE Alu -31 281 1 2068 115 23 3 chr10 12845174 12845478 -127471287 - AluSg SINE Alu 0 310 1 420 217 12 0 chr10 12845626 12845709 -127471056 - L1ME4a LINE L1 -414 5707 5624 302 61 20 0 chr10 12846271 12846320 -127470445 + (TG)n Simple_repeat Simple_repeat 2 51 0 499 120 0 27 chr10 12846324 12846399 -127470366 - FLAM_A SINE Alu -25 117 45 2057 91 7 17 chr10 12846630 12846927 -127469838 - AluSg SINE Alu -16 294 1 994 126 0 0 chr10 12846927 12847070 -127469695 - AluSg SINE Alu -167 143 1 227 223 91 66 chr10 12847568 12847689 -127469076 - L1ME4a LINE L1 -1276 4870 4747 1742 148 13 33 chr10 12847749 12848052 -127468713 - AluSx SINE Alu -15 297 1 1981 97 43 0 chr10 12848072 12848351 -127468414 - AluSc SINE Alu -18 291 1 2191 111 7 0 chr10 12848670 12848976 -127467789 - AluSg SINE Alu -2 308 1 1236 179 87 103 chr10 12849382 12849510 -127467255 - Looper DNA T2_type -178 1380 1252 2172 111 0 3 chr10 12849510 12849816 -127466949 - AluSx SINE Alu -7 305 1 1236 179 87 103 chr10 12849816 12850135 -127466630 - Looper DNA T2_type -306 1252 940 1806 75 95 0 chr10 12850454 12850707 -127466058 - AluY SINE Alu -13 298 22 342 0 0 0 chr10 12850948 12850986 -127465779 + (CA)n Simple_repeat Simple_repeat 2 39 0 23 33 0 0 chr10 12851258 12851288 -127465477 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr10 12851543 12851571 -127465194 + AT_rich Low_complexity Low_complexity 1 28 0 291 71 0 0 chr10 12851737 12851779 -127464986 + (TTTTA)n Simple_repeat Simple_repeat 2 43 0 1279 144 52 19 chr10 12851781 12852052 -127464713 - AluY SINE Alu -31 280 1 722 173 8 15 chr10 12852054 12852187 -127464578 - AluJo/FLAM SINE Alu -169 133 2 21 0 0 0 chr10 12852419 12852440 -127464325 + AT_rich Low_complexity Low_complexity 1 21 0 701 297 130 42 chr10 12852760 12853392 -127463373 - L2 LINE L2 -213 3059 2374 589 250 54 0 chr10 12853481 12853629 -127463136 - L1ME2 LINE L1 -3 6161 6006 366 188 0 0 chr10 12853630 12853699 -127463066 - L1ME2 LINE L1 -209 5955 5887 2745 171 52 15 chr10 12853707 12854091 -127462674 - MER21B LTR ERV1 -1 862 453 2106 125 0 0 chr10 12854091 12854396 -127462369 + AluSx SINE Alu 3 307 -5 2745 171 52 15 chr10 12854396 12854533 -127462232 - MER21B LTR ERV1 -410 453 322 258 156 0 0 chr10 12854673 12854718 -127462047 + L2 LINE L2 3269 3313 0 504 264 32 7 chr10 12854781 12854936 -127461829 + MER117 DNA MER1_type 1 159 -38 1818 138 7 3 chr10 12855176 12855467 -127461298 + AluJo SINE Alu 9 300 -12 249 118 0 0 chr10 12855687 12855721 -127461044 + Tigger4(Zombi) DNA MER2_type 4 37 -2694 * 901 98 286 98 chr10 12855719 12855844 -127460921 + Tigger4(Zombi) DNA MER2_type 2452 2552 -179 3868 89 47 15 chr10 12855844 12856066 -127460699 - L1MA1 LINE L1 0 6302 6089 2163 112 0 3 chr10 12856066 12856371 -127460394 + AluSx SINE Alu 1 304 -8 3868 89 47 15 chr10 12856371 12856743 -127460022 - L1MA1 LINE L1 -213 6089 5689 901 98 286 98 chr10 12856743 12856851 -127459914 + Tigger4(Zombi) DNA MER2_type 2552 2729 -2 467 119 525 0 chr10 12857086 12857187 -127459578 - AluSg SINE Alu -155 155 2 268 175 18 35 chr10 12857305 12857362 -127459403 - LTR67 LTR ERVL -3 554 499 2268 98 0 0 chr10 12857535 12857831 -127458934 + AluSq SINE Alu 1 296 -17 1517 175 0 11 chr10 12857844 12858112 -127458653 - AluJo SINE Alu -45 267 3 2439 65 0 0 chr10 12858481 12858788 -127457977 - AluY SINE Alu -4 307 1 207 100 0 0 chr10 12858796 12858826 -127457939 + (T)n Simple_repeat Simple_repeat 1 30 0 776 102 19 0 chr10 12858866 12858974 -127457791 - FLAM_C SINE Alu -32 111 2 411 243 22 135 chr10 12858974 12859078 -127457687 + MER5B DNA MER1_type 14 128 -50 2029 112 0 32 chr10 12859078 12859391 -127457374 - AluSq SINE Alu 0 313 11 411 243 22 135 chr10 12859391 12859406 -127457359 + MER5B DNA MER1_type 128 143 -35 2155 115 0 3 chr10 12859406 12859719 -127457046 - AluSp SINE Alu -1 312 1 411 243 22 135 chr10 12859719 12859783 -127456982 + MER5B DNA MER1_type 143 177 -1 1884 157 15 68 chr10 12860108 12860502 -127456263 + MLT1B LTR MaLR 18 390 0 1996 136 3 3 chr10 12860754 12861063 -127455702 - AluSx SINE Alu -3 309 1 388 191 15 0 chr10 12861287 12861355 -127455410 + MLT1E LTR MaLR 55 123 -470 586 89 0 0 chr10 12861375 12861454 -127455311 - AluJ/FLAM SINE Alu -232 80 2 873 153 0 20 chr10 12861557 12861707 -127455058 - AluSg/x SINE Alu -8 302 156 1859 159 3 0 chr10 12862587 12862883 -127453882 - AluSx SINE Alu -12 300 4 23 33 0 0 chr10 12862895 12862925 -127453840 + AT_rich Low_complexity Low_complexity 1 30 0 1641 145 17 3 chr10 12863102 12863391 -127453374 - L1PA16 LINE L1 -9 6157 5865 2321 74 3 0 chr10 12863394 12863693 -127453072 - AluSq SINE Alu -13 300 1 1240 91 0 0 chr10 12864267 12864442 -127452323 + AluSg/x SINE Alu 136 310 0 3878 90 41 0 chr10 12864531 12865063 -127451702 - MER41A LTR ERV1 0 554 1 2348 88 0 0 chr10 12865580 12865888 -127450877 - AluSc SINE Alu -1 308 1 448 263 135 44 chr10 12866102 12866413 -127450352 + L1MC/D LINE L1 5153 5490 -748 2461 51 0 0 chr10 12866745 12867039 -127449726 + AluY SINE Alu 2 295 -16 236 197 14 28 chr10 12867073 12867144 -127449621 + (TATAA)n Simple_repeat Simple_repeat 1 70 0 763 309 87 40 chr10 12867232 12867633 -127449132 - MLT1L LTR MaLR -48 567 148 642 124 58 33 chr10 12867633 12867754 -127449011 - MER30B DNA MER1_type 0 230 107 40 21 0 0 chr10 12867760 12867807 -127448958 + AT_rich Low_complexity Low_complexity 1 47 0 805 94 15 9 chr10 12867807 12867959 -127448806 - MER30B DNA MER1_type -75 155 1 597 256 67 0 chr10 12867969 12868133 -127448632 - MER5A DNA MER1_type -4 185 11 1123 38 0 0 chr10 12868386 12868517 -127448248 + AluSg SINE Alu 1 131 -179 569 147 0 42 chr10 12868800 12868895 -127447870 - AluSg/x SINE Alu -14 296 206 2329 64 0 10 chr10 12868944 12869242 -127447523 - AluY SINE Alu -16 295 1 2168 120 0 0 chr10 12869326 12869634 -127447131 - AluSx SINE Alu -4 308 1 2468 87 6 0 chr10 12869917 12870250 -127446515 - L1PB1 LINE L1 0 6151 5817 200 108 0 27 chr10 12870325 12870362 -127446403 + (TTTTC)n Simple_repeat Simple_repeat 5 40 0 207 0 0 0 chr10 12870833 12870856 -127445909 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 2176 116 3 0 chr10 12871161 12871471 -127445294 + AluSx SINE Alu 1 311 -1 4155 98 62 7 chr10 12871805 12872418 -127444347 - SVA Other Other 0 1386 740 1865 147 0 16 chr10 12872664 12872970 -127443795 + AluJb SINE Alu 1 301 -11 1795 117 78 0 chr10 12873191 12873474 -127443291 - AluSx SINE Alu -7 305 1 282 56 0 0 chr10 12873556 12873592 -127443173 + (A)n Simple_repeat Simple_repeat 1 36 0 2180 91 14 0 chr10 12874418 12874714 -127442051 - AluY SINE Alu -11 300 1 1796 141 35 0 chr10 12874814 12875104 -127441661 - AluSq SINE Alu -13 300 1 2141 109 0 0 chr10 12875268 12875561 -127441204 - AluSx SINE Alu -19 293 1 208 246 0 35 chr10 12875698 12875755 -127441010 - L2 LINE L2 -35 3237 3183 273 280 56 19 chr10 12876189 12876296 -127440469 + L1MC/D LINE L1 96 206 -5913 372 272 87 87 chr10 12876451 12876705 -127440060 + L1MC/D LINE L1 589 842 -5277 952 293 99 22 chr10 12876971 12877384 -127439381 + L1MC/D LINE L1 5296 5740 -2051 1296 131 36 18 chr10 12877396 12877618 -127439147 - AluJb SINE Alu -75 237 12 2530 40 0 0 chr10 12878194 12878494 -127438271 - AluY SINE Alu -11 300 1 1988 109 24 7 chr10 12878496 12878790 -127437975 - AluSp SINE Alu -14 299 1 1535 166 0 38 chr10 12879068 12879214 -127437551 - AluJb SINE Alu -32 280 149 1535 123 119 15 chr10 12879214 12879483 -127437282 - AluSg SINE Alu -13 297 1 1535 166 0 38 chr10 12879483 12879625 -127437140 - AluJb SINE Alu -163 149 3 1539 96 9 14 chr10 12880179 12880397 -127436368 - AluSq SINE Alu -96 217 1 979 137 0 0 chr10 12880827 12880973 -127435792 + AluSq/x SINE Alu 1 146 -167 2217 93 0 3 chr10 12880974 12881275 -127435490 + AluY SINE Alu 1 300 -11 1340 274 143 36 chr10 12881313 12882246 -127434519 - HAL1 LINE L1 -1124 1383 352 3038 136 2 2 chr10 12882678 12883126 -127433639 - MER83 LTR ERV1 0 448 1 1636 192 7 0 chr10 12883530 12883832 -127432933 - AluJo SINE Alu -8 304 1 1648 181 3 13 chr10 12883852 12884161 -127432604 - AluJb SINE Alu -6 306 1 1955 125 0 3 chr10 12884996 12885300 -127431465 - AluSx SINE Alu -9 303 1 1280 210 137 36 chr10 12886084 12886125 -127430640 + L1MC4 LINE L1 6584 6619 -1423 1715 114 84 4 chr10 12886125 12886411 -127430354 + AluSx SINE Alu 1 307 0 1280 210 137 36 chr10 12886411 12886754 -127430011 + L1MC4 LINE L1 6619 7008 -1034 1529 141 120 57 chr10 12886755 12886812 -127429953 + MER46B DNA MER2_type 2 54 -2677 589 236 0 16 chr10 12886812 12886935 -127429830 - FLAM_A SINE Alu -12 121 1 1529 141 120 57 chr10 12886935 12887210 -127429555 + MER46B DNA MER2_type 54 230 -6 2497 228 90 38 chr10 12887220 12887956 -127428809 + L1MC4 LINE L1 7012 7785 -257 1405 192 78 39 chr10 12887956 12888342 -127428423 - LTR37A LTR ERV1 -8 418 18 182 174 22 0 chr10 12890746 12890792 -127425973 + T-rich Low_complexity Low_complexity 1 47 0 298 213 52 81 chr10 12890808 12890944 -127425821 - HAL1 LINE L1 -20 2487 2356 2183 82 0 13 chr10 12892103 12892408 -127424357 + AluSx SINE Alu 1 301 -11 9246 57 7 109 chr10 12892916 12894431 -127422334 - SVA Other Other 0 1386 26 231 36 0 0 chr10 12894436 12894464 -127422301 + (AGGGGG)n Simple_repeat Simple_repeat 2 29 0 2134 127 0 0 chr10 12894648 12894955 -127421810 - AluSg SINE Alu -3 307 1 21 36 0 0 chr10 12895064 12895092 -127421673 + AT_rich Low_complexity Low_complexity 1 28 0 1550 176 32 0 chr10 12895115 12895393 -127421372 - AluJo SINE Alu -25 287 1 27 0 0 0 chr10 12895427 12895454 -127421311 + AT_rich Low_complexity Low_complexity 1 27 0 1894 134 0 47 chr10 12895559 12895734 -127421031 - AluSx SINE Alu -6 306 151 2265 88 3 0 chr10 12895734 12896029 -127420736 - AluSp SINE Alu -17 296 1 1894 134 0 47 chr10 12896029 12896174 -127420591 - AluSx SINE Alu -161 151 1 269 230 122 86 chr10 12896796 12896935 -127419830 + L2 LINE L2 3165 3308 -5 203 314 58 22 chr10 12896914 12897051 -127419714 + L3 LINE CR1 1175 1316 -261 * 1266 110 12 110 chr10 12897284 12897341 -127419424 - L1MA2 LINE L1 0 6304 6243 2049 114 0 10 chr10 12897341 12897648 -127419117 - AluSx SINE Alu -4 308 5 1266 110 12 110 chr10 12897648 12897845 -127418920 - L1MA2 LINE L1 -61 6243 6075 268 286 33 11 chr10 12897882 12897973 -127418792 + MIR SINE MIR 163 255 -7 1769 172 0 0 chr10 12899186 12899482 -127417283 + AluJo SINE Alu 1 296 -16 1843 112 22 14 chr10 12899482 12899794 -127416971 + AluSg SINE Alu 1 314 0 204 293 81 64 chr10 12901605 12901888 -127414877 + L2 LINE L2 1522 1809 -1505 1844 68 8 16 chr10 12901908 12902157 -127414608 + AluY SINE Alu 47 293 -18 2240 78 0 14 chr10 12902369 12902665 -127414100 + AluSx SINE Alu 1 292 -20 2187 99 3 0 chr10 12902667 12902960 -127413805 + AluSp SINE Alu 1 294 -19 1685 91 4 9 chr10 12902971 12903202 -127413563 + AluSx SINE Alu 1 230 -82 1982 116 10 10 chr10 12903597 12903908 -127412857 - AluSx SINE Alu -1 311 1 1148 149 26 5 chr10 12903910 12904104 -127412661 - AluJb SINE Alu -21 291 94 212 305 0 0 chr10 12904151 12904210 -127412555 - MIR SINE MIR -13 249 191 774 166 0 43 chr10 12904335 12904474 -127412291 - FLAM_C SINE Alu 0 133 1 1901 139 3 0 chr10 12904497 12904799 -127411966 - AluSp SINE Alu -10 303 1 2118 100 3 0 chr10 12904949 12905249 -127411516 + AluSx SINE Alu 1 301 -11 1969 121 3 47 chr10 12905842 12906164 -127410601 - AluSg SINE Alu 0 310 3 180 0 0 0 chr10 12906173 12906193 -127410572 + (T)n Simple_repeat Simple_repeat 1 20 0 2181 85 7 3 chr10 12906544 12906837 -127409928 - AluSc SINE Alu -15 294 1 334 201 262 17 chr10 12906928 12907067 -127409698 + MIR SINE MIR 2 165 -43 845 162 0 0 chr10 12907183 12907325 -127409440 + FLAM_C SINE Alu 1 142 -1 31 44 0 0 chr10 12907325 12907370 -127409395 + AT_rich Low_complexity Low_complexity 1 45 0 1793 122 37 0 chr10 12907378 12907649 -127409116 + AluSx SINE Alu 18 298 -14 2060 120 0 3 chr10 12907651 12907943 -127408822 + AluSg SINE Alu 2 292 -18 5676 76 60 30 chr10 12908068 12908870 -127407895 + LTR12 LTR ERV1 1 826 0 750 257 56 23 chr10 12909336 12909550 -127407215 + MIR SINE MIR 42 262 0 1481 184 50 0 chr10 12909559 12909837 -127406928 - AluJo SINE Alu -20 292 1 196 269 124 69 chr10 12909994 12910139 -127406626 - MIR SINE MIR -12 250 98 1403 166 0 91 chr10 12910247 12910554 -127406211 + AluJo SINE Alu 32 310 -2 2222 92 3 3 chr10 12910657 12910962 -127405803 - AluSc SINE Alu -4 305 1 306 109 0 22 chr10 12911308 12911354 -127405411 + Alu SINE Alu 1 45 -254 2187 102 0 3 chr10 12911501 12911806 -127404959 - AluSx SINE Alu -8 304 1 2168 93 0 0 chr10 12911818 12912107 -127404658 - AluSc SINE Alu -20 289 1 1874 117 0 8 chr10 12912639 12912905 -127403860 - AluSx SINE Alu -46 266 3 894 133 0 92 chr10 12912962 12913135 -127403630 - AluJo SINE Alu -63 249 93 1820 142 20 0 chr10 12913302 12913597 -127403168 - AluSx SINE Alu -11 301 1 639 188 0 55 chr10 12913611 12913777 -127402988 + FLAM_A SINE Alu 1 159 0 1329 225 58 41 chr10 12913848 12914201 -127402564 - L1ME LINE L1 -393 5771 5409 2131 114 0 3 chr10 12914201 12914500 -127402265 - AluSg SINE Alu -12 298 1 1329 225 58 41 chr10 12914500 12914559 -127402206 - L1ME LINE L1 -755 5409 5352 360 315 36 15 chr10 12914587 12914741 -127402024 - MIR SINE MIR -61 147 30 5328 111 18 45 chr10 12914969 12915414 -127401351 - L1PB1 LINE L1 0 6151 5695 1973 141 0 3 chr10 12915414 12915712 -127401053 - AluSx SINE Alu -15 297 1 5328 111 18 45 chr10 12915712 12916097 -127400668 - L1PB1 LINE L1 -456 5695 5301 10972 31 3 0 chr10 12916097 12918146 -127398619 - L1PA4 LINE L1 0 6155 4097 2240 68 0 35 chr10 12918149 12918460 -127398305 - AluY SINE Alu -9 302 3 5328 111 18 45 chr10 12918460 12918631 -127398134 - L1PB1 LINE L1 -852 5299 5229 1881 123 3 40 chr10 12918633 12918935 -127397830 - AluY SINE Alu -20 291 1 2137 86 0 63 chr10 12919466 12919781 -127396984 + AluSp SINE Alu 1 295 -18 2234 69 14 3 chr10 12920163 12920454 -127396311 + AluY SINE Alu 1 294 -17 2094 63 13 53 chr10 12920782 12921084 -127395681 + AluSg1 SINE Alu 1 290 -19 2170 94 7 0 chr10 12921460 12921746 -127395019 + AluSg SINE Alu 13 300 -10 1866 152 0 3 chr10 12921960 12922257 -127394508 + AluJb SINE Alu 1 296 -16 312 211 86 69 chr10 12922451 12922626 -127394139 - L1ME4a LINE L1 -50 6071 5894 2143 106 7 0 chr10 12922658 12922961 -127393804 - AluSg SINE Alu -1 309 5 2241 95 3 0 chr10 12922964 12923268 -127393497 - AluSp SINE Alu -8 305 1 2365 71 0 0 chr10 12923299 12923594 -127393171 - AluY SINE Alu -16 295 1 1185 89 6 0 chr10 12924224 12924382 -127392383 + AluSq SINE Alu 1 159 -154 2028 141 0 0 chr10 12924520 12924819 -127391946 - AluSx SINE Alu -13 299 1 1182 129 14 29 chr10 12924955 12925164 -127391601 + AluJo SINE Alu 87 292 -20 2081 97 21 0 chr10 12925394 12925683 -127391082 - AluSx SINE Alu -17 295 1 354 231 88 0 chr10 12925719 12925810 -127390955 - MER63 DNA MER1_type -86 750 26 1440 192 118 51 chr10 12925820 12926096 -127390669 - LOR1b LTR ERV1 0 461 205 2249 78 0 0 chr10 12926096 12926389 -127390376 - AluSc SINE Alu -16 293 1 2070 112 10 0 chr10 12926396 12926699 -127390066 - AluY SINE Alu -4 307 2 1440 192 118 51 chr10 12926699 12926846 -127389919 - LOR1b LTR ERV1 -261 200 1 1737 148 27 10 chr10 12927113 12927411 -127389354 + AluSx SINE Alu 1 303 -9 1962 142 0 19 chr10 12927990 12928306 -127388459 + AluSx SINE Alu 1 310 -2 781 158 0 50 chr10 12928340 12928479 -127388286 - FLAM_C SINE Alu -1 132 1 235 198 159 110 chr10 12928496 12928618 -127388147 + L1ME LINE L1 5635 5750 -371 1414 190 10 20 chr10 12928618 12928923 -127387842 + AluJo SINE Alu 1 302 -10 351 0 0 0 chr10 12928931 12928970 -127387795 + (CA)n Simple_repeat Simple_repeat 2 40 0 235 198 159 110 chr10 12928970 12929020 -127387745 + L1ME LINE L1 5756 5825 -296 2128 120 10 0 chr10 12929026 12929335 -127387430 + AluSx SINE Alu 1 312 0 443 200 14 186 chr10 12929520 12929601 -127387164 - MER45A DNA AcHobo -1405 176 151 1311 184 69 25 chr10 12929601 12929878 -127386887 + AluJo SINE Alu 1 289 -23 443 200 14 186 chr10 12929878 12930006 -127386759 - MER45A DNA AcHobo -1430 151 3 674 137 0 0 chr10 12931017 12931119 -127385646 - AluSx SINE Alu -20 290 189 836 147 15 0 chr10 12931121 12931257 -127385508 - AluSx SINE Alu -174 138 1 2612 27 0 0 chr10 12931428 12931728 -127385037 + AluY SINE Alu 1 300 -11 1973 110 27 3 chr10 12931976 12932268 -127384497 - AluSx SINE Alu -13 299 1 1517 166 14 20 chr10 12932597 12932892 -127383873 - AluJo SINE Alu -5 307 15 2116 92 0 32 chr10 12933170 12933485 -127383280 + AluY SINE Alu 1 305 -6 1859 114 52 0 chr10 12933495 12933784 -127382981 + AluSx SINE Alu 1 304 -8 1857 152 3 3 chr10 12934421 12934718 -127382047 - AluJo SINE Alu -15 297 1 330 263 60 88 chr10 12934794 12935011 -127381754 + MIR SINE MIR 52 262 0 2128 130 35 46 chr10 12935013 12935307 -127381458 + THE1B LTR MaLR 1 292 -72 2152 98 0 13 chr10 12935307 12935612 -127381153 - AluSc SINE Alu -8 301 1 2128 130 35 46 chr10 12935612 12935685 -127381080 + THE1B LTR MaLR 292 364 0 1895 152 0 7 chr10 12935799 12936096 -127380669 + AluSx SINE Alu 1 295 -17 405 129 0 0 chr10 12936539 12936609 -127380156 - AluSp/q SINE Alu -9 304 235 818 188 0 0 chr10 12936716 12936860 -127379905 + AluSg/x SINE Alu 159 302 -10 324 385 0 0 chr10 12937019 12937128 -127379637 + L2 LINE L2 3205 3313 0 2075 115 7 0 chr10 12937680 12937975 -127378790 + AluSx SINE Alu 7 303 -9 867 141 67 0 chr10 12937977 12938126 -127378639 - MER2 DNA MER2_type -65 280 122 1571 136 0 0 chr10 12938127 12938400 -127378365 + AluSx SINE Alu 42 314 0 1985 138 0 0 chr10 12938400 12938697 -127378068 + AluSx SINE Alu 1 297 -15 1041 68 0 0 chr10 12938697 12938830 -127377935 + AluY SINE Alu 1 133 -178 2020 110 10 0 chr10 12938831 12939131 -127377634 + AluSq SINE Alu 1 303 -10 23 0 0 0 chr10 12939416 12939439 -127377326 + AT_rich Low_complexity Low_complexity 1 23 0 1372 177 0 0 chr10 12939454 12939680 -127377085 + AluJb SINE Alu 14 239 -73 2229 95 3 3 chr10 12939681 12939985 -127376780 + AluSx SINE Alu 9 312 0 1807 156 0 0 chr10 12940156 12940438 -127376327 + AluSq SINE Alu 1 282 -31 1706 162 7 7 chr10 12940444 12940740 -127376025 + AluSx SINE Alu 1 296 -16 927 192 6 0 chr10 12940742 12940924 -127375841 + AluJb SINE Alu 130 312 0 1208 114 0 22 chr10 12941018 12941202 -127375563 - AluSg/x SINE Alu 0 312 133 1998 113 0 13 chr10 12941203 12941512 -127375253 - AluSp SINE Alu -8 305 1 613 228 0 0 chr10 12941806 12941929 -127374836 + FLAM_A SINE Alu 5 127 -6 182 167 21 42 chr10 12941950 12941998 -127374767 + L2 LINE L2 3041 3087 -226 2215 105 0 10 chr10 12942230 12942543 -127374222 + AluSx SINE Alu 3 312 0 2183 68 0 39 chr10 12942912 12943220 -127373545 + AluY SINE Alu 1 296 -15 2188 114 0 0 chr10 12943227 12943535 -127373230 + AluSx SINE Alu 1 308 -4 1788 133 12 62 chr10 12944633 12944957 -127371808 - AluJb SINE Alu -4 308 1 1254 184 92 26 chr10 12945652 12945924 -127370841 - AluSg SINE Alu -10 290 1 1254 128 0 20 chr10 12946266 12946461 -127370304 - AluSx SINE Alu -121 191 1 1190 178 0 0 chr10 12947849 12948062 -127368703 + AluSg/x SINE Alu 85 297 -15 817 175 0 7 chr10 12948069 12948212 -127368553 + L1PA15 LINE L1 6024 6165 0 1802 143 0 23 chr10 12948411 12948719 -127368046 - AluSx SINE Alu -11 301 1 300 135 54 68 chr10 12950083 12950157 -127366608 + L1MCa LINE L1 1992 2064 -4362 * 311 122 54 68 chr10 12950127 12950201 -127366564 + L1MCa LINE L1 1992 2064 -4362 28 0 0 0 chr10 12950201 12950229 -127366536 + AT_rich Low_complexity Low_complexity 1 28 0 473 269 70 75 chr10 12950337 12950668 -127366097 - L2 LINE L2 -24 3248 2920 1092 115 0 0 chr10 12950795 12950951 -127365814 - AluSx SINE Alu -32 280 125 951 114 0 0 chr10 12950990 12951122 -127365643 - AluSx SINE Alu -181 132 1 1497 161 8 0 chr10 12951126 12951374 -127365391 - AluJb SINE Alu -24 288 39 245 325 158 5 chr10 12952177 12952386 -127364379 + MIR SINE MIR 9 249 -13 27 0 0 0 chr10 12952594 12952621 -127364144 + AT_rich Low_complexity Low_complexity 1 27 0 210 167 0 0 chr10 12952863 12952899 -127363866 + A-rich Low_complexity Low_complexity 1 36 0 567 109 0 40 chr10 12952910 12953011 -127363754 - AluSp/q SINE Alu -2 311 215 353 194 30 0 chr10 12953113 12953180 -127363585 + Tigger5 DNA MER2_type 26 94 -2229 2034 129 0 6 chr10 12953180 12953491 -127363274 + AluY SINE Alu 1 309 -2 1967 206 55 122 chr10 12953539 12953908 -127362857 - L1ME1 LINE L1 -11 6155 5763 1925 137 6 10 chr10 12953908 12954221 -127362544 - AluSx SINE Alu 0 312 1 1967 206 55 122 chr10 12954221 12954235 -127362530 - L1ME1 LINE L1 -403 5763 5750 659 188 0 53 chr10 12954235 12954410 -127362355 + FLAM_A SINE Alu 1 168 0 1967 206 55 122 chr10 12954410 12954834 -127361931 - L1ME1 LINE L1 -416 5750 5398 2052 125 0 3 chr10 12954834 12955131 -127361634 - AluSx SINE Alu -12 300 5 1488 183 18 7 chr10 12955142 12955421 -127361344 + Tigger3(Golem) DNA MER2_type 2747 3028 -1 671 233 10 68 chr10 12955424 12955630 -127361135 - MIR SINE MIR -56 206 13 361 157 14 0 chr10 12955778 12955848 -127360917 - AluS SINE Alu -228 71 1 752 253 66 72 chr10 12955848 12956385 -127360380 - L1MEd LINE L1 -4823 1306 773 1973 142 3 0 chr10 12956433 12956742 -127360023 - AluSx SINE Alu -2 310 1 1883 126 28 0 chr10 12957096 12957382 -127359383 - AluSg SINE Alu -16 294 1 1274 189 8 12 chr10 12958248 12958507 -127358258 - L1MB3 LINE L1 -15 6168 5911 754 180 0 29 chr10 12958513 12958652 -127358113 + MER2 DNA MER2_type 1 135 -210 2276 68 0 40 chr10 12958652 12958976 -127357789 - AluY SINE Alu 0 311 1 3051 121 20 82 chr10 12958996 12959558 -127357207 + MER1A DNA MER1_type 1 527 0 1962 130 0 13 chr10 12960213 12960513 -127356252 - AluSx SINE Alu -16 296 1 346 93 0 0 chr10 12960823 12960866 -127355899 - AluJo SINE Alu -13 288 246 285 218 16 65 chr10 12960997 12961121 -127355644 + (CCCA)n Simple_repeat Simple_repeat 1 118 0 1376 187 11 26 chr10 12961283 12961556 -127355209 - AluJo SINE Alu -43 269 1 1972 114 13 35 chr10 12961556 12961873 -127354892 - AluSq SINE Alu -3 310 1 270 176 0 0 chr10 12962082 12962133 -127354632 + CT-rich Low_complexity Low_complexity 2 52 0 180 0 0 0 chr10 12962169 12962189 -127354576 + (T)n Simple_repeat Simple_repeat 1 20 0 1078 119 0 0 chr10 12962723 12962883 -127353882 - AluSc SINE Alu -18 291 132 1553 113 0 4 chr10 12962883 12963047 -127353718 - AluSc SINE Alu -11 298 134 2053 101 3 29 chr10 12963047 12963354 -127353411 - AluY SINE Alu -12 299 1 1553 113 0 4 chr10 12963354 12963420 -127353345 - AluSc SINE Alu -175 134 69 1480 176 43 0 chr10 12963553 12963832 -127352933 - L1MA8 LINE L1 -37 6254 5964 741 186 43 6 chr10 12963836 12963927 -127352838 - Looper DNA T2_type -120 1438 1337 182 37 37 0 chr10 12963927 12963954 -127352811 + (CA)n Simple_repeat Simple_repeat 2 29 0 741 186 43 6 chr10 12963954 12964023 -127352742 - Looper DNA T2_type -221 1337 1272 2349 79 0 0 chr10 12964025 12964328 -127352437 - AluY SINE Alu -8 303 1 196 320 13 13 chr10 12964519 12964594 -127352171 - MIR SINE MIR -140 122 48 1719 235 95 77 chr10 12964858 12965625 -127351140 - MER21B LTR ERV1 -71 792 12 38 18 0 18 chr10 12966038 12966064 -127350701 + AT_rich Low_complexity Low_complexity 1 26 -29 1018 127 51 19 chr10 12966064 12966222 -127350543 - FRAM SINE Alu 0 166 4 38 18 0 18 chr10 12966222 12966251 -127350514 + AT_rich Low_complexity Low_complexity 26 55 0 1190 214 71 0 chr10 12966270 12966522 -127350243 - MER21B LTR ERV1 -593 270 1 709 131 0 9 chr10 12966631 12966738 -127350027 + AluSq/x SINE Alu 2 107 -206 2229 109 0 6 chr10 12967110 12967423 -127349342 + AluSx SINE Alu 1 311 -1 477 253 81 93 chr10 12967566 12967646 -127349119 - MER102b DNA MER1_type -1088 340 261 480 274 79 0 chr10 12967646 12967810 -127348955 + MER69A DNA AcHobo 1 177 0 477 253 81 93 chr10 12967810 12967977 -127348788 - MER102b DNA MER1_type -1167 261 96 2125 120 3 0 chr10 12967977 12968276 -127348489 + AluSx SINE Alu 1 300 -12 477 253 81 93 chr10 12968276 12968371 -127348394 - MER102b DNA MER1_type -1332 96 1 2240 76 21 0 chr10 12969239 12969529 -127347236 - AluSx SINE Alu -16 296 1 326 281 70 83 chr10 12970807 12971035 -127345730 + L2 LINE L2 3047 3271 -1 481 222 44 37 chr10 12971110 12971245 -127345520 + Charlie8 DNA MER1_type 37 172 -2245 2032 211 135 40 chr10 12971294 12971705 -127345060 - Charlie2 DNA MER1_type -16 2846 2475 2224 100 0 0 chr10 12971705 12972006 -127344759 - AluSq SINE Alu -12 301 1 2032 211 135 40 chr10 12972006 12972352 -127344413 - Charlie2 DNA MER1_type -387 2475 2017 349 86 86 0 chr10 12972606 12972734 -127344031 + (TA)n Simple_repeat Simple_repeat 1 139 0 2165 87 7 10 chr10 12972853 12973152 -127343613 - AluSq SINE Alu -15 298 1 22 0 0 0 chr10 12973178 12973200 -127343565 + AT_rich Low_complexity Low_complexity 1 22 0 534 265 132 37 chr10 12973239 12973564 -127343201 - L1ME4a LINE L1 0 6121 5766 1551 162 9 58 chr10 12973587 12973915 -127342850 - AluJo SINE Alu 0 312 1 4305 185 82 21 chr10 12973966 12974026 -127342739 - L1MB8 LINE L1 0 6178 6123 2183 108 3 0 chr10 12974026 12974332 -127342433 + AluSq SINE Alu 1 307 -6 4305 185 82 21 chr10 12974332 12976054 -127340711 - L1MB8 LINE L1 -55 6123 4302 1583 111 13 0 chr10 12976183 12976418 -127340347 - L1PA15 LINE L1 -269 5896 5659 249 267 163 12 chr10 12976429 12976515 -127340250 - MIR SINE MIR -67 141 43 597 163 0 122 chr10 12976623 12976770 -127339995 + MLT2B1 LTR ERVL 131 259 -261 1407 124 0 0 chr10 12976770 12976972 -127339793 + AluSx SINE Alu 64 265 -47 815 110 0 24 chr10 12978856 12978983 -127337782 + AluJo/FLAM SINE Alu 1 124 -188 2322 85 0 7 chr10 12978985 12979292 -127337473 - AluSg SINE Alu -5 305 1 334 201 262 17 chr10 12979383 12979522 -127337243 + MIR SINE MIR 2 165 -43 845 162 0 0 chr10 12979638 12979780 -127336985 + FLAM_C SINE Alu 1 142 -1 31 44 0 0 chr10 12979780 12979825 -127336940 + AT_rich Low_complexity Low_complexity 1 45 0 1819 118 37 0 chr10 12979833 12980104 -127336661 + AluSx SINE Alu 18 298 -14 2060 120 0 3 chr10 12980106 12980398 -127336367 + AluSg SINE Alu 2 292 -18 5719 80 59 29 chr10 12980523 12981325 -127335440 + LTR12 LTR ERV1 1 826 0 1802 126 11 4 chr10 12981757 12982020 -127334745 - AluSx SINE Alu -47 265 1 2276 79 7 0 chr10 12982026 12982316 -127334449 - AluY SINE Alu -19 292 1 212 163 0 0 chr10 12982401 12982444 -127334321 + A-rich Low_complexity Low_complexity 1 43 0 2235 113 0 3 chr10 12982624 12982917 -127333848 - AluSx SINE Alu -20 292 1 270 187 37 8 chr10 12982975 12983044 -127333721 - L1MC/D LINE L1 -411 5759 5705 1816 168 10 7 chr10 12983491 12983788 -127332977 - AluJb SINE Alu -14 298 1 363 163 12 38 chr10 12983997 12984077 -127332688 - Tigger5 DNA MER2_type 0 2323 2246 894 161 74 0 chr10 12984078 12984240 -127332525 - AluSg/x SINE Alu -3 309 136 2169 98 0 0 chr10 12984243 12984518 -127332247 - AluSx SINE Alu 0 312 38 2317 87 0 35 chr10 12985781 12986091 -127330674 - AluSq SINE Alu -14 299 1 866 141 0 0 chr10 12986295 12986416 -127330349 - AluJb SINE Alu -10 302 182 577 294 162 5 chr10 12987473 12987670 -127329095 + MIR SINE MIR 33 260 -2 230 224 0 0 chr10 12987748 12987797 -127328968 + GA-rich Low_complexity Low_complexity 2 50 0 2222 102 16 13 chr10 12988287 12988592 -127328173 - AluSx SINE Alu -6 306 1 1743 155 3 25 chr10 12988826 12989110 -127327655 + AluJo SINE Alu 13 290 -22 197 263 0 79 chr10 12989545 12989621 -127327144 - L3 LINE CR1 -12 1565 1496 339 25 0 0 chr10 12990132 12990172 -127326593 + (CA)n Simple_repeat Simple_repeat 1 40 0 2305 100 3 0 chr10 12990458 12990758 -127326007 - AluY SINE Alu -10 301 1 1625 132 0 0 chr10 12992012 12992239 -127324526 - AluSg/x SINE Alu -2 308 82 2133 109 28 0 chr10 12992321 12992605 -127324160 - AluSx SINE Alu -20 292 1 2385 99 0 0 chr10 12993167 12993469 -127323296 - AluSx SINE Alu -10 302 1 369 143 43 0 chr10 12993728 12993798 -127322967 + AluJ/FLAM SINE Alu 1 73 -229 1671 188 10 10 chr10 12994160 12994463 -127322302 + AluJo SINE Alu 1 303 -9 345 319 46 80 chr10 12995051 12995591 -127321174 + L2 LINE L2 2226 2747 -567 1061 165 0 0 chr10 12995592 12995756 -127321009 + AluJb SINE Alu 137 300 -12 286 252 114 32 chr10 12995819 12995942 -127320823 - MER94 DNA DNA -1 133 1 358 313 99 42 chr10 12995981 12996199 -127320566 + L2 LINE L2 2865 3069 -244 2209 135 0 0 chr10 12996199 12996511 -127320254 - AluSx SINE Alu 0 312 1 358 313 99 42 chr10 12996511 12996717 -127320048 + L2 LINE L2 3069 3313 0 2231 110 7 0 chr10 12997173 12997474 -127319291 - AluSp SINE Alu -10 303 1 1631 146 11 40 chr10 12997479 12997645 -127319120 - AluJo SINE Alu -18 294 138 2085 141 0 0 chr10 12997645 12997944 -127318821 - AluSx SINE Alu -13 299 1 1631 146 11 40 chr10 12997944 12998052 -127318713 - AluJo SINE Alu -174 138 28 269 241 63 0 chr10 12998309 12998388 -127318377 - LTR33 LTR ERVL -304 217 134 2362 107 0 0 chr10 12998628 12998966 -127317799 - AluSg SINE Alu 0 338 1 1654 52 0 19 chr10 12998986 12999198 -127317567 - L1PA7 LINE L1 -7 6147 5940 252 391 38 11 chr10 12999395 12999656 -127317109 + L2 LINE L2 2521 2788 -526 1542 205 38 6 chr10 12999656 12999998 -127316767 + MLT1A1 LTR MaLR 1 353 -12 262 261 111 25 chr10 13000061 13000260 -127316505 + L2 LINE L2 2839 3054 -218 2353 121 0 0 chr10 13000294 13000600 -127316165 - AluSx SINE Alu -6 306 1 252 0 0 0 chr10 13001696 13001724 -127315041 + (ATG)n Simple_repeat Simple_repeat 2 29 0 2005 137 7 0 chr10 13001724 13002009 -127314756 - AluSx SINE Alu -25 287 1 23 0 0 0 chr10 13002039 13002062 -127314703 + AT_rich Low_complexity Low_complexity 1 23 0 398 188 10 0 chr10 13003377 13003473 -127313292 + (TGAA)n Simple_repeat Simple_repeat 2 98 0 671 189 6 17 chr10 13003485 13003665 -127313100 + (TGAA)n Simple_repeat Simple_repeat 3 180 0 959 170 0 0 chr10 13004946 13005093 -127311672 - FRAM SINE Alu -32 144 1 2356 98 6 16 chr10 13005891 13006207 -127310558 + AluSq SINE Alu 1 313 0 1183 214 30 24 chr10 13007783 13008078 -127308687 - MER68 LTR ERV1 -9 553 257 400 127 13 13 chr10 13008093 13008172 -127308593 + (TCTA)n Simple_repeat Simple_repeat 1 79 0 2094 108 0 11 chr10 13008172 13008451 -127308314 - AluSx SINE Alu -36 276 1 2460 177 16 5 chr10 13008452 13008892 -127307873 - L1MC1 LINE L1 -9 6324 5880 1284 167 23 0 chr10 13008895 13009116 -127307649 - MER68 LTR ERV1 -294 268 43 2273 113 33 36 chr10 13010708 13011071 -127305694 - THE1B LTR MaLR -2 362 1 2312 97 0 19 chr10 13011235 13011543 -127305222 - AluSx SINE Alu -10 302 1 241 200 0 0 chr10 13011585 13011645 -127305120 + L1MA10 LINE L1 6110 6321 -13 209 300 75 25 chr10 13011659 13011739 -127305026 - L2 LINE L2 -36 3236 3153 408 288 72 8 chr10 13011757 13011882 -127304883 + MER39 LTR ERV1 1 133 -574 * 1011 204 177 14 chr10 13011859 13012153 -127304612 + MER39 LTR ERV1 260 601 -106 1610 156 11 7 chr10 13012153 13012423 -127304342 - AluJb SINE Alu -14 298 28 900 159 0 0 chr10 13013528 13013660 -127303105 - FRAM SINE Alu -27 149 18 339 324 0 0 chr10 13015834 13015942 -127300823 + (TG)n Simple_repeat Simple_repeat 1 108 0 207 375 62 8 chr10 13015948 13016076 -127300689 + L2 LINE L2 3179 3313 0 351 224 60 45 chr10 13016414 13016548 -127300217 + L1 LINE L1 3125 3260 -2886 2419 99 0 0 chr10 13017675 13017977 -127298788 + AluSq SINE Alu 11 312 -1 280 239 60 0 chr10 13018285 13018352 -127298413 + MIR SINE MIR 56 126 -136 397 332 68 10 chr10 13018556 13018761 -127298004 - MIR SINE MIR -26 236 20 217 270 32 0 chr10 13019169 13019232 -127297533 - L2 LINE L2 -1 3271 3207 722 241 77 19 chr10 13019309 13019516 -127297249 + MER20 DNA MER1_type 1 219 0 247 311 60 48 chr10 13020190 13020357 -127296408 - MIR SINE MIR -79 183 15 346 281 0 22 chr10 13020694 13020872 -127295893 + (TATG)n Simple_repeat Simple_repeat 1 174 0 1808 194 10 70 chr10 13021465 13021882 -127294883 - MLT2B2 LTR ERVL -121 394 3 222 37 0 0 chr10 13023073 13023100 -127293665 + (TCC)n Simple_repeat Simple_repeat 1 27 0 377 308 40 33 chr10 13023167 13023353 -127293412 + MIR SINE MIR 22 208 -54 2132 134 0 3 chr10 13023353 13023651 -127293114 + AluSx SINE Alu 1 297 -15 377 308 40 33 chr10 13023651 13023666 -127293099 + MIR SINE MIR 208 221 -41 2406 68 0 13 chr10 13023727 13024034 -127292731 - AluY SINE Alu -8 303 1 234 250 62 83 chr10 13024748 13024892 -127291873 + MER91A DNA MER1_type 56 196 0 302 319 26 17 chr10 13025180 13025296 -127291469 - MER5A DNA MER1_type -26 163 47 2410 181 30 8 chr10 13025429 13025898 -127290867 + L1MB3 LINE L1 5704 6182 -1 1816 167 0 14 chr10 13026681 13026975 -127289790 + AluJb SINE Alu 1 290 -22 2094 134 0 3 chr10 13027359 13027651 -127289114 + AluSx SINE Alu 11 301 -11 524 225 11 112 chr10 13028471 13028535 -127288230 + MER5B DNA MER1_type 1 70 -108 1868 170 0 31 chr10 13028535 13028853 -127287912 + AluJo SINE Alu 1 308 -4 524 225 11 112 chr10 13028853 13028966 -127287799 + MER5B DNA MER1_type 70 160 -18 267 256 68 60 chr10 13029185 13029302 -127287463 + MIR SINE MIR 119 236 -26 890 123 0 0 chr10 13029610 13029732 -127287033 - AluSg/x SINE Alu -10 302 181 1898 142 3 47 chr10 13030721 13031038 -127285727 + AluJb SINE Alu 1 303 -9 196 325 216 36 chr10 13031658 13031852 -127284913 - MIR SINE MIR -29 233 5 447 169 14 0 chr10 13032158 13032229 -127284536 + AluS SINE Alu 228 299 -13 2325 96 0 0 chr10 13032611 13032913 -127283852 + AluY SINE Alu 1 302 -9 232 169 0 72 chr10 13033343 13033426 -127283339 + T-rich Low_complexity Low_complexity 3 79 0 4385 78 7 26 chr10 13033860 13034032 -127282733 - MER41A LTR ERV1 0 554 380 2235 123 3 0 chr10 13034032 13034341 -127282424 - AluSq SINE Alu -3 310 1 4385 78 7 26 chr10 13034341 13034733 -127282032 - MER41A LTR ERV1 -174 380 1 5590 120 28 68 chr10 13034806 13035747 -127281018 - MER4D LTR ERV1 0 903 1 4445 89 4 0 chr10 13036508 13037060 -127279705 - MER41A LTR ERV1 0 554 1 2061 223 29 91 chr10 13037735 13038625 -127278140 + L1MC2 LINE L1 3817 4651 -1495 5108 198 51 13 chr10 13038642 13039851 -127276914 + L1MC2 LINE L1 5083 6335 -9 275 326 28 14 chr10 13040544 13040685 -127276080 + L1MEd LINE L1 1114 1256 -4863 2119 117 3 0 chr10 13041035 13041326 -127275439 + AluSx SINE Alu 1 292 -20 498 57 0 0 chr10 13042775 13042845 -127273920 + (TG)n Simple_repeat Simple_repeat 2 71 0 21 0 0 0 chr10 13043082 13043103 -127273662 + AT_rich Low_complexity Low_complexity 1 21 0 1978 192 86 8 chr10 13043419 13043814 -127272951 + MSTB LTR MaLR 1 426 0 1876 139 4 14 chr10 13043818 13044129 -127272636 - AluSx SINE Alu 0 312 5 196 318 45 0 chr10 13044341 13044407 -127272358 + L2 LINE L2 3245 3313 0 21 36 0 0 chr10 13045358 13045386 -127271379 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 13045417 13045439 -127271326 + AT_rich Low_complexity Low_complexity 1 22 0 1727 199 22 14 chr10 13045612 13045969 -127270796 - L1MC3 LINE L1 -21 7764 7405 2205 134 42 36 chr10 13045970 13046327 -127270438 - THE1B LTR MaLR -5 359 1 326 276 0 0 chr10 13047696 13047772 -127268993 + L2 LINE L2 3197 3272 0 229 333 111 11 chr10 13048281 13048371 -127268394 + MIR SINE MIR 43 141 -67 324 238 25 49 chr10 13048461 13048583 -127268182 + MER103 DNA DNA 37 155 -11 1812 160 66 119 chr10 13049674 13050162 -127266603 + MER4C LTR ERV1 4 465 0 1550 183 3 45 chr10 13050209 13050405 -127266360 - AluJb SINE Alu -12 300 97 1953 163 13 43 chr10 13050405 13050780 -127265985 + THE1B LTR MaLR 1 364 0 12024 100 24 1 chr10 13050781 13052324 -127264441 + THE1B-int LTR MaLR 2 1579 -1 2109 147 24 53 chr10 13052325 13052700 -127264065 + THE1B LTR MaLR 1 364 0 1550 183 3 45 chr10 13052700 13052810 -127263955 - AluJb SINE Alu -214 98 3 205 255 319 0 chr10 13054248 13054342 -127262423 - L2 LINE L2 0 3272 3149 1874 163 3 49 chr10 13055148 13055474 -127261291 + AluJb SINE Alu 1 311 -1 1082 306 47 26 chr10 13056715 13057237 -127259528 + L2 LINE L2 2557 3087 -226 1770 146 3 59 chr10 13057621 13057942 -127258823 - AluJo SINE Alu -9 303 1 2279 111 0 0 chr10 13058081 13058387 -127258378 - AluSx SINE Alu -6 306 1 1811 155 0 31 chr10 13059459 13059636 -127257129 - AluJo SINE Alu -5 307 143 2020 133 17 0 chr10 13059636 13059936 -127256829 - AluSg SINE Alu -5 305 1 1811 155 0 31 chr10 13059936 13060075 -127256690 - AluJo SINE Alu -169 143 1 2380 99 0 0 chr10 13060617 13060919 -127255846 + AluSc SINE Alu 1 302 -7 2291 102 0 7 chr10 13061363 13061668 -127255097 - AluSc SINE Alu -6 303 1 1083 139 0 24 chr10 13061897 13062063 -127254702 - FRAM SINE Alu -4 162 1 2112 143 0 7 chr10 13062334 13062641 -127254124 - AluSx SINE Alu -7 305 1 1970 133 28 88 chr10 13062912 13063311 -127253454 + THE1C LTR MaLR 1 375 0 2524 64 0 0 chr10 13063737 13064034 -127252731 + AluY SINE Alu 1 297 -14 2239 120 0 0 chr10 13064548 13064857 -127251908 - AluSx SINE Alu -3 309 1 221 292 103 0 chr10 13064965 13065081 -127251684 - MIR SINE MIR -69 139 19 197 138 0 0 chr10 13065205 13065234 -127251531 + MIR SINE MIR 118 146 -62 1685 166 0 28 chr10 13065238 13065368 -127251397 + AluJo SINE Alu 1 133 -179 1896 112 0 4 chr10 13065368 13065628 -127251137 + AluY SINE Alu 41 299 -12 1685 166 0 28 chr10 13065628 13065787 -127250978 + AluJo SINE Alu 133 282 -30 1956 155 0 0 chr10 13066359 13066655 -127250110 - AluSx SINE Alu -16 296 1 897 157 31 0 chr10 13067057 13067216 -127249549 - L1MD1 LINE L1 0 6242 6079 1685 173 0 26 chr10 13067257 13067564 -127249201 - AluJb SINE Alu -13 299 1 359 195 49 0 chr10 13069498 13069580 -127247185 - L1ME4a LINE L1 -79 6042 5957 2048 135 3 0 chr10 13069708 13070019 -127246746 - AluSx SINE Alu 0 312 1 231 114 0 0 chr10 13070112 13070147 -127246618 + (CGTG)n Simple_repeat Simple_repeat 1 35 0 221 326 0 31 chr10 13070209 13070307 -127246458 + CT-rich Low_complexity Low_complexity 3 97 0 2220 124 0 9 chr10 13070941 13071256 -127245509 + AluJo SINE Alu 1 312 0 2275 95 10 0 chr10 13071718 13072013 -127244752 - AluSx SINE Alu -14 298 1 1115 111 52 0 chr10 13072487 13072640 -127244125 + AluSg/x SINE Alu 135 295 -15 731 265 57 5 chr10 13072647 13072858 -127243907 - MIR SINE MIR 0 262 41 2212 84 30 7 chr10 13073388 13073685 -127243080 - AluY SINE Alu -7 304 1 273 77 0 39 chr10 13073710 13073762 -127243003 - L1MB4 LINE L1 -3 6177 6128 3671 118 11 13 chr10 13073784 13074333 -127242432 - L1PA13 LINE L1 0 6163 5616 2875 166 4 4 chr10 13074334 13074829 -127241936 - L1MB3 LINE L1 -41 6142 5648 2255 98 0 3 chr10 13075204 13075499 -127241266 + AluSg SINE Alu 1 294 -16 2172 104 3 0 chr10 13076327 13076614 -127240151 + AluSx SINE Alu 1 288 -24 526 290 97 6 chr10 13078248 13078424 -127238341 + MIR SINE MIR 46 237 -25 207 322 67 0 chr10 13078636 13078726 -127238039 - L3 LINE CR1 -505 1072 977 203 327 0 0 chr10 13079001 13079053 -127237712 + (TG)n Simple_repeat Simple_repeat 2 53 0 362 351 50 50 chr10 13079207 13079466 -127237299 + L2 LINE L2 2990 3248 -24 192 77 0 0 chr10 13079652 13079678 -127237087 + (AGGGGG)n Simple_repeat Simple_repeat 1 26 0 2983 236 76 25 chr10 13079678 13080898 -127235867 - L1MDa LINE L1 -2845 3695 2417 7153 55 37 14 chr10 13080900 13082447 -127234318 - SVA Other Other -739 1386 1 238 33 0 0 chr10 13082545 13082575 -127234190 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1321 87 54 5 chr10 13082575 13082760 -127234005 - AluY SINE Alu -1 310 88 1089 200 30 16 chr10 13082867 13083131 -127233634 - MER61B LTR ERV1 -64 361 1 12227 116 18 6 chr10 13083131 13085141 -127231624 - MER61B-int LTR ERV1 0 5217 3111 1087 227 33 3 chr10 13085632 13085936 -127230829 + MER33 DNA MER1_type 10 322 -2 21 36 0 0 chr10 13086058 13086086 -127230679 + AT_rich Low_complexity Low_complexity 1 28 0 1883 125 7 18 chr10 13086260 13086569 -127230196 + AluSx SINE Alu 4 309 0 188 284 149 0 chr10 13086838 13086912 -127229853 - L2 LINE L2 -287 2985 2901 26 0 0 0 chr10 13087420 13087446 -127229319 + AT_rich Low_complexity Low_complexity 1 26 0 246 62 0 0 chr10 13088067 13088099 -127228666 + (CA)n Simple_repeat Simple_repeat 1 32 0 311 294 40 16 chr10 13088108 13088234 -127228531 - L1MC4 LINE L1 -1339 6703 6575 250 206 43 11 chr10 13088234 13088326 -127228439 + (TA)n Simple_repeat Simple_repeat 2 96 0 2416 76 0 0 chr10 13088489 13088792 -127227973 - AluY SINE Alu -8 303 1 186 307 59 72 chr10 13089635 13089788 -127226977 - MIR3 SINE MIR -28 180 30 209 89 44 22 chr10 13089945 13089990 -127226775 + (TA)n Simple_repeat Simple_repeat 1 46 0 353 300 123 0 chr10 13090103 13090233 -127226532 + MIR SINE MIR 8 153 -109 2185 204 17 14 chr10 13090236 13090823 -127225942 + L1M4 LINE L1 4812 5400 -746 1618 127 0 0 chr10 13090825 13091045 -127225720 + AluSx SINE Alu 38 257 -55 424 152 65 11 chr10 13091175 13091267 -127225498 - MER61B-int LTR ERV1 -4714 503 407 783 148 107 31 chr10 13091278 13091474 -127225291 - MER61B-int LTR ERV1 -4763 454 244 1073 216 98 34 chr10 13091804 13092100 -127224665 - MER61B LTR ERV1 -28 396 1 1782 173 60 41 chr10 13093507 13093923 -127222842 - MER61C LTR ERV1 -10 424 1 274 330 121 12 chr10 13093927 13094100 -127222665 + MIR SINE MIR 31 222 -40 425 240 33 60 chr10 13094344 13094494 -127222271 + L2 LINE L2 3153 3298 -15 25 31 0 0 chr10 13094504 13094536 -127222229 + AT_rich Low_complexity Low_complexity 1 32 0 229 204 0 0 chr10 13094551 13094605 -127222160 + L1 LINE L1 2407 2460 -3686 195 42 0 0 chr10 13095078 13095102 -127221663 + (T)n Simple_repeat Simple_repeat 1 24 0 23 54 0 0 chr10 13095595 13095632 -127221133 + AT_rich Low_complexity Low_complexity 1 37 0 311 250 9 69 chr10 13095721 13095837 -127220928 + MIR SINE MIR 82 190 -72 26 0 0 0 chr10 13096651 13096677 -127220088 + AT_rich Low_complexity Low_complexity 1 26 0 1796 204 0 10 chr10 13096997 13097310 -127219455 - AluJo SINE Alu -2 310 1 414 377 8 8 chr10 13097719 13097849 -127218916 - MER91A DNA MER1_type -66 130 1 1341 186 34 15 chr10 13098424 13098688 -127218077 + AluJb SINE Alu 34 302 -10 590 60 0 12 chr10 13098718 13098802 -127217963 + (GGAA)n Simple_repeat Simple_repeat 2 84 0 183 335 110 35 chr10 13099313 13099486 -127217279 - L3 LINE CR1 -1132 445 260 2637 42 0 3 chr10 13100574 13100883 -127215882 - AluY SINE Alu -3 308 1 2376 90 0 0 chr10 13100883 13101183 -127215582 - AluSg SINE Alu -10 300 1 724 164 41 7 chr10 13101183 13101329 -127215436 - L1MB3 LINE L1 -352 5831 5681 573 281 176 31 chr10 13101376 13101700 -127215065 - L3 LINE CR1 -598 979 609 2237 109 0 0 chr10 13101855 13102157 -127214608 - AluY SINE Alu -9 302 1 1866 159 3 3 chr10 13102166 13102455 -127214310 - AluJo SINE Alu -20 292 4 1796 158 0 7 chr10 13102890 13103169 -127213596 - AluJb SINE Alu -35 277 1 401 169 0 0 chr10 13103170 13103241 -127213524 - L1ME3 LINE L1 -178 5984 5914 527 201 101 22 chr10 13103252 13103431 -127213334 - L1ME3 LINE L1 -298 5864 5672 208 385 0 0 chr10 13103558 13103623 -127213142 - L3 LINE CR1 -1188 389 325 1391 120 57 0 chr10 13104277 13104486 -127212279 + AluJo SINE Alu 86 306 -6 444 284 8 8 chr10 13104522 13104656 -127212109 + L1MC/D LINE L1 5556 5689 -2119 1946 96 0 8 chr10 13104763 13105024 -127211741 - AluY SINE Alu -52 259 1 2240 219 50 23 chr10 13105024 13105223 -127211542 - L1ME1 LINE L1 -218 5948 5756 2219 118 0 0 chr10 13105223 13105520 -127211245 - AluSg1 SINE Alu -12 297 1 2240 219 50 23 chr10 13105520 13105985 -127210780 - L1ME1 LINE L1 -410 5756 5266 3723 232 43 41 chr10 13105986 13107264 -127209501 - L1ME1 LINE L1 -1482 4664 3384 917 213 64 0 chr10 13107284 13107486 -127209279 + MER58A DNA MER1_type 10 224 0 305 208 0 0 chr10 13107516 13107588 -127209177 - L1ME1 LINE L1 -2786 3360 3289 6454 61 19 21 chr10 13107600 13108458 -127208307 - SVA Other Other -1 1385 530 2518 177 29 38 chr10 13108601 13108649 -127208116 - L1MB3 LINE L1 -3 6180 6133 2037 138 0 41 chr10 13108649 13108967 -127207798 - AluJb SINE Alu -7 305 1 2518 177 29 38 chr10 13108967 13109056 -127207709 - L1MB3 LINE L1 -50 6133 6045 2232 123 0 0 chr10 13109056 13109358 -127207407 - AluSx SINE Alu -10 302 1 2518 177 29 38 chr10 13109358 13109779 -127206986 - L1MB3 LINE L1 -138 6045 5626 261 57 0 0 chr10 13110450 13110485 -127206280 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 652 174 9 0 chr10 13111340 13111455 -127205310 - FLAM_A SINE Alu -7 135 20 1916 121 82 0 chr10 13111465 13111746 -127205019 - AluJb SINE Alu -8 304 1 240 316 15 30 chr10 13111908 13112041 -127204724 + L1ME LINE L1 325 455 -5615 1213 249 122 71 chr10 13112111 13112324 -127204441 + L1ME LINE L1 448 649 -5431 1966 145 14 14 chr10 13112324 13112620 -127204145 + AluSx SINE Alu 1 296 -16 1213 249 122 71 chr10 13112620 13113657 -127203108 + L1ME LINE L1 649 1700 -4380 2393 75 0 0 chr10 13113663 13113956 -127202809 - AluY SINE Alu -18 293 1 2025 128 0 10 chr10 13114577 13114910 -127201855 + AluSx SINE Alu 1 330 0 246 320 0 0 chr10 13115282 13115385 -127201380 + A-rich Low_complexity Low_complexity 1 103 0 5103 122 13 10 chr10 13116037 13116909 -127199856 + L1PA13 LINE L1 5285 6163 0 591 328 66 26 chr10 13117092 13117394 -127199371 + HAL1 LINE L1 50 363 -2144 2180 102 3 0 chr10 13118277 13118562 -127198203 + AluSx SINE Alu 1 286 -26 30 0 0 0 chr10 13118562 13118592 -127198173 + AT_rich Low_complexity Low_complexity 1 30 0 284 172 0 16 chr10 13118829 13118893 -127197872 + (CATATA)n Simple_repeat Simple_repeat 2 64 0 1405 248 45 45 chr10 13119144 13119649 -127197116 + MLT1D LTR MaLR 1 505 0 21 0 0 0 chr10 13119707 13119728 -127197037 + AT_rich Low_complexity Low_complexity 1 21 0 1899 208 36 8 chr10 13120088 13120473 -127196292 + MSTD LTR MaLR 1 396 0 1127 310 31 12 chr10 13120752 13121171 -127195594 + LTR16A LTR ERVL 15 441 -9 232 297 34 61 chr10 13122197 13122345 -127194420 + MIR SINE MIR 88 231 -31 11693 150 60 12 chr10 13122784 13124987 -127191778 - Tigger1 DNA MER2_type -1 2417 110 1733 134 4 36 chr10 13126639 13126915 -127189850 + AluSx SINE Alu 43 309 -3 2317 87 0 0 chr10 13126958 13127256 -127189509 + AluSg SINE Alu 1 298 -12 3498 21 5 5 chr10 13127989 13128410 -127188355 + L1PA4 LINE L1 5735 6155 0 204 40 0 0 chr10 13129095 13129120 -127187645 + (TC)n Simple_repeat Simple_repeat 1 25 0 202 255 0 20 chr10 13129800 13129851 -127186914 + MIR SINE MIR 156 205 -57 515 185 247 18 chr10 13130139 13130366 -127186399 - L1ME4a LINE L1 -2 6537 6259 191 61 30 0 chr10 13130374 13130407 -127186358 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1481 157 34 75 chr10 13130415 13130709 -127186056 - AluJo SINE Alu -30 282 1 1839 113 0 45 chr10 13130719 13131010 -127185755 - AluSx SINE Alu 0 312 35 2294 122 25 0 chr10 13131306 13131660 -127185105 + THE1B LTR MaLR 1 363 -1 454 266 22 45 chr10 13132175 13132397 -127184368 - L1MC5 LINE L1 -728 7233 7017 1218 232 24 7 chr10 13132441 13132738 -127184027 - MLT1F1 LTR MaLR -3 564 263 410 296 143 36 chr10 13132858 13133629 -127183136 - HAL1 LINE L1 -940 1567 715 253 203 145 0 chr10 13134053 13134122 -127182643 - HAL1 LINE L1 -2305 202 124 1207 184 88 42 chr10 13134185 13134539 -127182226 + MLT1B LTR MaLR 21 390 0 24 53 0 0 chr10 13134619 13134657 -127182108 + AT_rich Low_complexity Low_complexity 1 38 0 1973 254 63 7 chr10 13135388 13136687 -127180078 - L1ME4a LINE L1 -743 5821 4727 285 246 42 0 chr10 13136719 13136837 -127179928 - L1ME4a LINE L1 -2989 3575 3453 1031 212 63 27 chr10 13136846 13137549 -127179216 - L1MCa LINE L1 -4499 2065 1090 945 152 40 25 chr10 13137549 13137747 -127179018 + LTR54 LTR ERV1 1 201 -309 1352 263 71 77 chr10 13137747 13138589 -127178176 - L1MCa LINE L1 -5072 973 137 23 0 0 0 chr10 13139540 13139563 -127177202 + AT_rich Low_complexity Low_complexity 1 23 0 231 301 81 23 chr10 13140406 13140579 -127176186 + MER34 LTR ERV1 355 537 -5 389 242 43 56 chr10 13140785 13140946 -127175819 - MER110-int LTR ERV1 -1794 2853 2695 725 130 9 9 chr10 13141014 13141129 -127175636 - AluSp/q SINE Alu -18 295 181 300 53 0 0 chr10 13141256 13141294 -127175471 + (CA)n Simple_repeat Simple_repeat 2 39 0 1085 229 123 13 chr10 13141484 13141859 -127174906 - MER63B DNA MER1_type 0 436 21 236 332 68 68 chr10 13142103 13142305 -127174460 + L3 LINE CR1 398 599 -978 670 199 80 11 chr10 13142305 13142481 -127174284 - MER5A DNA MER1_type -1 188 1 236 332 68 68 chr10 13142481 13142721 -127174044 + L3 LINE CR1 598 840 -737 245 349 47 16 chr10 13143706 13143835 -127172930 - L2 LINE L2 -39 3274 3142 312 24 0 0 chr10 13143965 13144007 -127172758 + L1P LINE L1 4320 4361 -1785 2204 134 8 0 chr10 13144113 13144472 -127172293 - L1P4 LINE L1 -348 5817 5456 2261 94 10 3 chr10 13144475 13144782 -127171983 - AluSc SINE Alu 0 309 1 9282 238 21 12 chr10 13144791 13147421 -127169344 - L1P LINE L1 -1511 4635 1981 1094 210 94 5 chr10 13147676 13148172 -127168593 - L1ME LINE L1 -649 5517 4985 2569 46 9 9 chr10 13148173 13148500 -127168265 - L1PA5 LINE L1 -4 6150 5824 1865 43 0 0 chr10 13148502 13148736 -127168029 + L1PA5 LINE L1 5565 5798 -356 263 206 16 16 chr10 13148773 13148836 -127167929 + CT-rich Low_complexity Low_complexity 1 63 0 791 256 0 0 chr10 13148836 13149051 -127167714 - L1ME LINE L1 -1199 4947 4733 * 901 309 47 25 chr10 13149049 13149564 -127167201 + L1M4 LINE L1 108 633 -5763 370 208 56 8 chr10 13149560 13149685 -127167080 + L1M4 LINE L1 3244 3374 -2772 * 307 257 106 80 chr10 13149687 13149998 -127166767 + L1M4 LINE L1 3031 3349 -2866 310 50 0 0 chr10 13150044 13150084 -127166681 + L1P2 LINE L1 5694 5733 -421 491 337 11 0 chr10 13150193 13150383 -127166382 - L1M3d LINE L1 -5012 879 688 216 0 0 0 chr10 13150441 13150465 -127166300 + (TTG)n Simple_repeat Simple_repeat 1 24 0 1569 291 31 26 chr10 13150482 13151168 -127165597 - L1M3d LINE L1 -5379 512 3 1816 222 56 14 chr10 13151171 13151250 -127165515 + L1M4 LINE L1 4746 4820 -1433 4854 86 41 5 chr10 13151250 13151914 -127164851 - LTR12 LTR ERV1 0 688 1 1816 222 56 14 chr10 13151914 13152303 -127164462 + L1M4 LINE L1 4820 5260 -993 201 74 0 0 chr10 13152303 13152330 -127164435 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1816 222 56 14 chr10 13152330 13152625 -127164140 + L1M4 LINE L1 5260 5541 -712 1099 194 69 113 chr10 13153431 13153714 -127163051 + MER34 LTR ERV1 1 248 -294 384 22 0 0 chr10 13153714 13153759 -127163006 + (TG)n Simple_repeat Simple_repeat 2 46 0 1099 194 69 113 chr10 13153759 13154042 -127162723 + MER34 LTR ERV1 248 542 0 425 225 183 6 chr10 13155062 13155231 -127161534 + HAL1 LINE L1 2309 2507 0 218 232 89 18 chr10 13155337 13155393 -127161372 - L2 LINE L2 -8 3305 3246 191 345 0 0 chr10 13157554 13157612 -127159153 + L2 LINE L2 3205 3262 -10 567 229 3 10 chr10 13158611 13158751 -127158014 + L1MA9 LINE L1 6130 6261 -30 569 122 10 0 chr10 13158757 13158855 -127157910 + L1MA9 LINE L1 6214 6312 0 1968 131 25 0 chr10 13158866 13159149 -127157616 + AluSx SINE Alu 1 290 -22 478 150 30 0 chr10 13159235 13159335 -127157430 + GA-rich Low_complexity Low_complexity 3 105 0 192 40 0 0 chr10 13160909 13160934 -127155831 + (TG)n Simple_repeat Simple_repeat 2 26 0 24 67 0 0 chr10 13161413 13161458 -127155307 + AT_rich Low_complexity Low_complexity 1 45 0 314 245 43 12 chr10 13161549 13161712 -127155053 + (TA)n Simple_repeat Simple_repeat 2 169 0 1976 113 62 0 chr10 13161736 13162010 -127154755 - AluSg SINE Alu -19 291 1 318 120 0 0 chr10 13162010 13162060 -127154705 - L1MB3 LINE L1 -41 6142 6093 28 107 0 0 chr10 13162511 13162623 -127154142 + AT_rich Low_complexity Low_complexity 1 112 0 28 0 0 0 chr10 13163606 13163634 -127153131 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr10 13164027 13164050 -127152715 + AT_rich Low_complexity Low_complexity 1 23 0 220 277 0 32 chr10 13164113 13164207 -127152558 + (TATATG)n Simple_repeat Simple_repeat 4 94 0 32 43 0 0 chr10 13164559 13164605 -127152160 + AT_rich Low_complexity Low_complexity 1 46 0 2079 110 7 10 chr10 13166160 13166452 -127150313 + AluSx SINE Alu 1 291 -21 2027 122 0 13 chr10 13166462 13166765 -127150000 + AluSx SINE Alu 1 299 -13 1654 152 22 14 chr10 13167342 13167619 -127149146 + AluJb SINE Alu 13 291 -21 387 0 0 0 chr10 13167619 13167662 -127149103 + (GGAA)n Simple_repeat Simple_repeat 3 45 0 2235 107 10 3 chr10 13167845 13168153 -127148612 + AluSg SINE Alu 1 310 0 1605 156 7 68 chr10 13169275 13169583 -127147182 + AluJo SINE Alu 1 289 -23 317 209 0 0 chr10 13170351 13170418 -127146347 + L1MC/D LINE L1 5710 5776 -2032 632 110 11 0 chr10 13170438 13170529 -127146236 + AluJ/FLAM SINE Alu 1 92 -220 183 80 0 0 chr10 13170594 13170619 -127146146 + (T)n Simple_repeat Simple_repeat 1 25 0 239 237 0 13 chr10 13171909 13171985 -127144780 + L1M3 LINE L1 5367 5441 -730 2361 99 0 0 chr10 13172133 13172436 -127144329 + AluSx SINE Alu 1 303 -9 2018 116 0 0 chr10 13172932 13173232 -127143533 + AluSx SINE Alu 7 306 0 290 179 32 98 chr10 13173277 13173400 -127143365 + L1MC4 LINE L1 7811 8033 -9 246 225 65 87 chr10 13173519 13173657 -127143108 + MIR SINE MIR 58 192 -70 1006 238 110 14 chr10 13174472 13174837 -127141928 + MLT1J2 LTR MaLR 14 413 -37 2252 97 3 0 chr10 13174838 13175127 -127141638 + AluSx SINE Alu 1 290 -22 1126 96 0 0 chr10 13175127 13175273 -127141492 + AluSg/x SINE Alu 134 279 -33 504 48 0 0 chr10 13175293 13175356 -127141409 + (TAGA)n Simple_repeat Simple_repeat 3 65 0 443 296 11 48 chr10 13175556 13175745 -127141020 + MLT1J LTR MaLR 257 438 -73 4057 90 47 7 chr10 13176275 13176895 -127139870 - L1MA2 LINE L1 0 6304 5660 2770 19 0 0 chr10 13176925 13177232 -127139533 + AluYa5 SINE Alu 1 307 -4 22 56 0 0 chr10 13177339 13177375 -127139390 + AT_rich Low_complexity Low_complexity 1 36 0 2256 110 3 3 chr10 13178432 13178732 -127138033 - AluSx SINE Alu -12 300 1 502 263 105 0 chr10 13179028 13179180 -127137585 - MIR3 SINE MIR 0 208 41 189 311 33 33 chr10 13180199 13180289 -127136476 + MIR SINE MIR 91 180 -82 742 162 0 0 chr10 13180372 13180483 -127136282 + AluJo/FLAM SINE Alu 4 114 -198 288 149 0 0 chr10 13180484 13180531 -127136234 + AluJb SINE Alu 68 114 -188 1536 166 0 0 chr10 13180532 13180773 -127135992 + AluJo SINE Alu 68 308 -4 190 162 54 0 chr10 13180786 13180823 -127135942 + MIR SINE MIR 101 139 -69 265 286 98 30 chr10 13180825 13180958 -127135807 + MIR3 SINE MIR 67 208 0 763 271 72 0 chr10 13181270 13181506 -127135259 + MIR SINE MIR 4 256 -6 2051 98 0 66 chr10 13181836 13182153 -127134612 + AluSx SINE Alu 3 298 -14 689 169 8 0 chr10 13182153 13182271 -127134494 + Charlie3 DNA MER1_type 2584 2702 -8 2288 90 0 3 chr10 13183153 13183442 -127133323 - AluSx SINE Alu -24 288 1 425 254 103 67 chr10 13183971 13184195 -127132570 + MIR SINE MIR 20 251 -11 301 298 23 57 chr10 13184207 13184382 -127132383 - MIR SINE MIR -68 140 9 243 170 0 0 chr10 13184531 13184578 -127132187 + CT-rich Low_complexity Low_complexity 5 51 0 2030 98 11 0 chr10 13184578 13184855 -127131910 - AluSx SINE Alu -32 280 1 1415 175 20 33 chr10 13184941 13185244 -127131521 - AluJo SINE Alu -13 299 1 562 317 118 48 chr10 13186675 13187655 -127129110 - L2 LINE L2 0 3272 2218 2371 76 0 10 chr10 13187668 13187982 -127128783 + AluY SINE Alu 1 311 0 1803 157 3 0 chr10 13188678 13188964 -127127801 + AluSq SINE Alu 6 292 -21 454 167 25 142 chr10 13189355 13189419 -127127346 + MER5B DNA MER1_type 1 46 -132 1343 176 93 17 chr10 13189419 13189709 -127127056 + AluJo SINE Alu 1 312 0 454 167 25 142 chr10 13189709 13189764 -127127001 + MER5B DNA MER1_type 46 106 -72 2245 100 0 0 chr10 13190670 13190979 -127125786 + AluSq SINE Alu 3 311 -2 2193 78 0 14 chr10 13191302 13191598 -127125167 - AluY SINE Alu -3 308 17 1226 224 68 36 chr10 13192427 13192811 -127123954 - MSTD LTR MaLR 0 396 1 1062 192 63 1 chr10 13193370 13193603 -127123162 - MLT2B1 LTR ERVL 0 520 223 896 200 6 0 chr10 13193605 13193775 -127122990 + FRAM SINE Alu 1 170 -6 1264 138 14 32 chr10 13193775 13193993 -127122772 - MLT2B2 LTR ERVL -297 218 5 413 36 18 0 chr10 13194063 13194118 -127122647 + (GA)n Simple_repeat Simple_repeat 1 56 0 231 159 45 0 chr10 13194312 13194356 -127122409 - MER66B LTR ERV1 -149 337 292 224 236 0 0 chr10 13194357 13194412 -127122353 + T-rich Low_complexity Low_complexity 1 55 0 2365 51 0 41 chr10 13195200 13195515 -127121250 + AluY SINE Alu 5 306 -5 23 0 0 53 chr10 13195674 13195690 -127121075 + AT_rich Low_complexity Low_complexity 1 16 -20 2143 98 0 0 chr10 13195690 13195977 -127120788 + AluSg SINE Alu 1 287 -23 23 0 0 53 chr10 13195977 13195998 -127120767 + AT_rich Low_complexity Low_complexity 16 36 0 2267 99 0 3 chr10 13196167 13196471 -127120294 + AluSq SINE Alu 1 303 -10 1251 169 60 4 chr10 13196484 13196733 -127120032 + AluSx SINE Alu 32 294 -18 384 188 7 104 chr10 13196865 13196935 -127119830 + MER5A DNA MER1_type 4 57 -132 2040 110 0 28 chr10 13196935 13197254 -127119511 + AluSg SINE Alu 1 310 0 384 188 7 104 chr10 13197254 13197300 -127119465 + MER5A DNA MER1_type 57 106 -83 296 398 31 0 chr10 13197463 13197591 -127119174 + L2 LINE L2 3119 3250 -22 1098 147 107 13 chr10 13197910 13198134 -127118631 + THE1C LTR MaLR 1 245 -130 1663 153 13 23 chr10 13198383 13198691 -127118074 - AluJo SINE Alu -7 305 1 1453 162 21 79 chr10 13199367 13199739 -127117026 - AluJo SINE Alu 0 354 2 191 316 55 104 chr10 13199771 13200055 -127116710 + L2 LINE L2 1792 2060 -1254 1872 140 0 52 chr10 13200055 13200383 -127116382 - AluSx SINE Alu -1 311 1 191 316 55 104 chr10 13200383 13200424 -127116341 + L2 LINE L2 2060 2101 -1213 2268 145 51 17 chr10 13200424 13200837 -127115928 - MSTA LTR MaLR -1 427 1 2148 123 0 0 chr10 13200846 13201156 -127115609 - AluSg SINE Alu 0 310 1 1323 248 174 2 chr10 13201314 13201774 -127114991 + Charlie7 DNA MER1_type 1 539 -2073 444 227 75 64 chr10 13201794 13202089 -127114676 + Charlie7 DNA MER1_type 2314 2611 -1 2781 132 6 9 chr10 13202098 13202554 -127114211 - MER1A DNA MER1_type 0 529 30 369 274 33 112 chr10 13203723 13203836 -127112929 - MIR SINE MIR -8 254 164 1583 157 0 60 chr10 13203836 13204029 -127112736 - AluJo SINE Alu -8 304 136 2176 65 3 78 chr10 13204029 13204351 -127112414 + AluSp SINE Alu 1 298 -15 1583 157 0 60 chr10 13204351 13204475 -127112290 - AluJo SINE Alu -176 136 6 369 274 33 112 chr10 13204475 13204576 -127112189 - MIR SINE MIR -98 164 57 186 43 0 0 chr10 13205055 13205078 -127111687 + (TTTCC)n Simple_repeat Simple_repeat 4 26 0 180 0 0 0 chr10 13206104 13206124 -127110641 + (T)n Simple_repeat Simple_repeat 1 20 0 703 76 0 50 chr10 13206662 13206781 -127109984 - L1PB1 LINE L1 -3 6148 6036 495 296 40 25 chr10 13208081 13208280 -127108485 + MIR3 SINE MIR 1 202 -6 537 268 155 5 chr10 13208603 13208797 -127107968 - MIR SINE MIR -4 258 36 378 258 96 36 chr10 13208981 13209148 -127107617 + MIR SINE MIR 36 212 -50 1979 134 3 3 chr10 13209242 13209549 -127107216 + AluSx SINE Alu 2 308 -4 343 203 29 0 chr10 13210075 13210144 -127106621 - Tigger7 DNA MER2_type 0 2487 2417 1253 167 8 72 chr10 13210162 13210413 -127106352 - Tigger7 DNA MER2_type -2220 267 33 1559 158 3 91 chr10 13210491 13210821 -127105944 + AluJb SINE Alu 1 301 -11 201 240 144 48 chr10 13211868 13212014 -127104751 + MIR SINE MIR 91 250 -12 528 137 0 0 chr10 13212910 13212983 -127103782 + AluS SINE Alu 2 74 -239 847 176 85 6 chr10 13214020 13214196 -127102569 + MIR SINE MIR 31 220 -42 219 314 177 8 chr10 13214429 13214553 -127102212 - L2 LINE L2 -2 3311 3167 1575 206 41 16 chr10 13216458 13216822 -127099943 - MLT1A2 LTR MaLR 0 374 2 1428 92 0 5 chr10 13217135 13217330 -127099435 - AluSq SINE Alu -20 293 100 275 148 0 16 chr10 13218627 13218688 -127098077 + (TCCC)n Simple_repeat Simple_repeat 3 62 0 3570 261 44 37 chr10 13220755 13220895 -127095870 + L2 LINE L2 1562 1700 -1614 248 0 0 30 chr10 13220895 13220928 -127095837 + (CAAAC)n Simple_repeat Simple_repeat 3 34 0 3570 261 44 37 chr10 13220928 13222002 -127094763 + L2 LINE L2 1700 2784 -530 503 255 78 31 chr10 13223042 13223234 -127093531 - MIR SINE MIR -59 203 3 212 204 23 0 chr10 13223272 13223316 -127093449 + L2 LINE L2 3226 3270 -2 476 289 64 13 chr10 13223340 13223496 -127093269 - MIR SINE MIR -18 244 81 807 148 22 15 chr10 13223503 13223638 -127093127 - AluJb SINE Alu -18 294 159 1865 123 27 7 chr10 13223826 13224126 -127092639 + AluSx SINE Alu 1 306 -6 395 245 0 82 chr10 13224127 13224225 -127092540 + L1MC4 LINE L1 6614 6703 -1339 324 308 22 0 chr10 13224158 13224249 -127092516 - L1MC4 LINE L1 -1336 6706 6614 * 389 255 0 43 chr10 13224265 13224359 -127092406 + L1MC4 LINE L1 6614 6703 -1339 182 328 17 0 chr10 13224679 13224737 -127092028 + L2 LINE L2 3246 3304 -9 2166 114 0 3 chr10 13226267 13226573 -127090192 + AluSx SINE Alu 1 305 -7 195 42 0 0 chr10 13226675 13226699 -127090066 + (TG)n Simple_repeat Simple_repeat 2 25 0 1917 206 51 2 chr10 13226716 13227149 -127089616 - L1MB1 LINE L1 -2 6166 5713 216 333 241 0 chr10 13227264 13227372 -127089393 + MIR SINE MIR 106 239 -23 195 125 18 54 chr10 13227417 13227473 -127089292 + CT-rich Low_complexity Low_complexity 3 56 0 270 136 0 0 chr10 13227587 13227631 -127089134 + (A)n Simple_repeat Simple_repeat 1 44 0 3368 168 20 54 chr10 13227752 13227981 -127088784 - L1MB7 LINE L1 -23 6161 5926 2058 112 10 0 chr10 13227981 13228277 -127088488 + AluSx SINE Alu 1 299 -13 3368 168 20 54 chr10 13228277 13228786 -127087979 - L1MB7 LINE L1 -258 5926 5448 410 206 22 0 chr10 13228862 13228954 -127087811 + AluJb SINE Alu 14 107 -205 796 159 0 23 chr10 13229276 13229408 -127087357 - FLAM_A SINE Alu -2 140 12 226 136 68 51 chr10 13229413 13229472 -127087293 - AluJo SINE Alu -160 142 83 1041 166 135 0 chr10 13230638 13230831 -127085934 + MER20 DNA MER1_type 1 219 0 2029 99 31 3 chr10 13232080 13232372 -127084393 + AluSx SINE Alu 1 300 -12 230 325 32 24 chr10 13233397 13233520 -127083245 - MIR3 SINE MIR -7 201 78 848 156 0 46 chr10 13233706 13233879 -127082886 + FRAM SINE Alu 2 166 -10 1204 72 63 5 chr10 13234326 13234533 -127082232 + AluSx SINE Alu 1 219 -93 285 105 0 0 chr10 13234649 13234687 -127082078 + Alu SINE Alu 255 292 -10 2387 230 61 8 chr10 13234718 13235357 -127081408 + L1M4 LINE L1 2366 3038 -3108 307 53 0 0 chr10 13236135 13236173 -127080592 + THE1A LTR MaLR 318 355 0 623 188 182 7 chr10 13236279 13236433 -127080332 + MER5A DNA MER1_type 7 187 -2 224 273 150 16 chr10 13236738 13236784 -127079981 + MIR SINE MIR 40 78 -169 1917 146 3 0 chr10 13236784 13237085 -127079680 - AluJb SINE Alu -10 302 1 224 273 150 16 chr10 13237085 13237163 -127079602 + MIR SINE MIR 78 182 -65 186 150 33 17 chr10 13237494 13237554 -127079211 + CT-rich Low_complexity Low_complexity 5 65 0 347 291 176 24 chr10 13237565 13237856 -127078909 - HAL1 LINE L1 -1230 1277 887 319 148 0 99 chr10 13237960 13238041 -127078724 + AluSx SINE Alu 229 301 0 644 250 14 24 chr10 13238525 13238705 -127078060 - MER5A DNA MER1_type -8 181 4 425 19 19 0 chr10 13240119 13240173 -127076592 + (TCCA)n Simple_repeat Simple_repeat 1 55 0 1978 128 6 3 chr10 13242266 13242578 -127074187 - AluSq SINE Alu 0 313 1 1536 138 50 31 chr10 13242853 13243113 -127073652 - THE1B LTR MaLR -99 265 1 21 0 0 0 chr10 13243491 13243512 -127073253 + AT_rich Low_complexity Low_complexity 1 21 0 1074 106 0 0 chr10 13243626 13243777 -127072988 + AluSg/x SINE Alu 158 308 -4 2081 253 72 33 chr10 13244318 13244395 -127072370 + L1MDa LINE L1 21 94 -6446 201 74 0 0 chr10 13244395 13244422 -127072343 + (CA)n Simple_repeat Simple_repeat 2 28 0 2081 253 72 33 chr10 13244422 13245107 -127071658 + L1MDa LINE L1 94 1042 -5498 204 40 0 0 chr10 13245116 13245141 -127071624 + (CA)n Simple_repeat Simple_repeat 2 26 0 568 218 46 17 chr10 13245141 13245315 -127071450 + L1M4 LINE L1 4263 4441 -1705 302 135 27 54 chr10 13245325 13245399 -127071366 + L1M4 LINE L1 4377 4448 -1698 2293 216 59 52 chr10 13245401 13246175 -127070590 + L1M4 LINE L1 4377 5156 -990 289 103 0 0 chr10 13246639 13246678 -127070087 - MLT1K LTR MaLR -4 584 546 1911 132 4 0 chr10 13249352 13249656 -127067109 - AluSx SINE Alu 0 305 1 256 310 14 0 chr10 13250681 13250752 -127066013 - L2 LINE L2 -40 3232 3161 1073 119 5 60 chr10 13251877 13252062 -127064703 + AluSg/x SINE Alu 128 302 -10 274 261 43 22 chr10 13252599 13252691 -127064074 - MIR SINE MIR -92 170 77 2511 129 20 0 chr10 13253573 13253930 -127062835 + THE1B LTR MaLR 1 364 0 2172 110 0 0 chr10 13254260 13254560 -127062205 - AluSc SINE Alu -9 300 1 3422 69 0 2 chr10 13254586 13255023 -127061742 + L1PA10 LINE L1 5724 6159 -9 312 262 224 22 chr10 13255313 13255496 -127061269 + MLT1J LTR MaLR 292 511 0 1683 141 31 10 chr10 13255635 13255925 -127060840 + AluJb SINE Alu 1 296 -16 2058 110 3 23 chr10 13256888 13257197 -127059568 + AluSx SINE Alu 1 303 -9 183 80 0 0 chr10 13257323 13257348 -127059417 + (TG)n Simple_repeat Simple_repeat 2 26 0 2208 105 0 6 chr10 13257962 13258276 -127058489 + AluSx SINE Alu 1 312 0 1243 189 115 22 chr10 13259115 13259385 -127057380 - AluJo SINE Alu -17 295 1 2061 116 10 0 chr10 13259670 13259971 -127056794 + AluSx SINE Alu 1 304 -8 193 283 182 0 chr10 13260057 13260156 -127056609 - MIR SINE MIR -32 230 114 288 111 0 0 chr10 13260567 13260612 -127056153 + (CA)n Simple_repeat Simple_repeat 1 45 0 604 213 7 7 chr10 13260810 13260946 -127055819 - L1MA5 LINE L1 -4 6296 6161 1717 87 17 0 chr10 13260961 13261192 -127055573 - AluSx SINE Alu -77 235 1 318 188 78 0 chr10 13262112 13262176 -127054589 + Charlie3 DNA MER1_type 46 114 -2596 317 24 24 0 chr10 13262195 13262236 -127054529 - MER63 DNA MER1_type -888 42 1 411 323 62 12 chr10 13262243 13262404 -127054361 + L2 LINE L2 1859 2027 -1287 3658 104 11 33 chr10 13262453 13262521 -127054244 + MER1A DNA MER1_type 1 69 -2631 2166 93 0 10 chr10 13262521 13262832 -127053933 + AluY SINE Alu 1 308 -3 3658 104 11 33 chr10 13262832 13263302 -127053463 + MER1A DNA MER1_type 69 527 0 1325 158 0 0 chr10 13264519 13264734 -127052031 + L1PA13 LINE L1 5936 6150 -13 1065 150 0 18 chr10 13264799 13264966 -127051799 - FRAM SINE Alu -1 165 2 236 36 0 0 chr10 13265168 13265196 -127051569 - MLT2B2 LTR ERVL -10 505 478 222 91 0 0 chr10 13265196 13265229 -127051536 + (TG)n Simple_repeat Simple_repeat 1 33 0 2255 89 0 0 chr10 13265304 13265596 -127051169 + AluY SINE Alu 2 293 -18 1888 146 10 0 chr10 13267776 13268071 -127048694 + AluSx SINE Alu 1 298 -14 752 183 23 0 chr10 13268097 13268228 -127048537 + AluJo SINE Alu 2 135 -177 29 47 0 0 chr10 13268228 13268271 -127048494 + AT_rich Low_complexity Low_complexity 1 43 0 1812 131 4 0 chr10 13268281 13268549 -127048216 + AluJo SINE Alu 23 291 -21 22 0 0 0 chr10 13268549 13268571 -127048194 + AT_rich Low_complexity Low_complexity 1 22 0 4241 105 42 63 chr10 13269866 13269952 -127046813 - LTR8A LTR ERV1 0 727 641 2093 109 3 0 chr10 13269952 13270246 -127046519 + AluSg SINE Alu 1 295 -15 4241 105 42 63 chr10 13270246 13270902 -127045863 - LTR8A LTR ERV1 -86 641 1 755 324 15 8 chr10 13270983 13271242 -127045523 + MIR SINE MIR 2 262 0 2088 91 44 0 chr10 13271295 13271591 -127045174 - AluSg SINE Alu -1 309 1 451 220 30 0 chr10 13271841 13271941 -127044824 - MER97c DNA MER1_type? -931 159 57 545 241 20 89 chr10 13272182 13272264 -127044501 + MER5A DNA MER1_type 1 87 -102 2217 88 10 3 chr10 13272264 13272571 -127044194 + AluSq SINE Alu 1 309 -4 545 241 20 89 chr10 13272571 13272691 -127044074 + MER5A DNA MER1_type 87 189 0 378 326 28 7 chr10 13272701 13272845 -127043920 + MIR SINE MIR 97 243 -19 1247 168 97 22 chr10 13273175 13273443 -127043322 + AluJo SINE Alu 1 288 -24 2063 64 0 11 chr10 13273451 13273717 -127043048 + AluY SINE Alu 1 263 -48 459 288 50 45 chr10 13274047 13274269 -127042496 + MIR SINE MIR 40 262 0 386 308 117 40 chr10 13274740 13275013 -127041752 + MLT1J1 LTR MaLR 100 393 -53 589 82 20 20 chr10 13275558 13275656 -127041109 + AluSg/x SINE Alu 161 258 -52 180 125 0 0 chr10 13275970 13276002 -127040763 + (TCTA)n Simple_repeat Simple_repeat 1 32 0 525 16 0 0 chr10 13276028 13276090 -127040675 + (TC)n Simple_repeat Simple_repeat 1 62 0 1050 214 20 12 chr10 13276835 13277083 -127039682 + AluJo SINE Alu 1 250 -62 497 258 65 73 chr10 13278351 13278599 -127038166 + MIR SINE MIR 5 250 -12 1244 321 141 12 chr10 13278675 13279394 -127037371 + L3 LINE CR1 63 873 -704 1890 90 8 0 chr10 13279399 13279665 -127037100 + AluY SINE Alu 1 268 -43 235 175 0 0 chr10 13280515 13280555 -127036210 + L2 LINE L2 3274 3313 0 1474 122 3 90 chr10 13281574 13281895 -127034870 + AluSq SINE Alu 1 293 -20 203 261 0 0 chr10 13282267 13282313 -127034452 + A-rich Low_complexity Low_complexity 3 48 0 270 220 68 0 chr10 13283077 13283136 -127033629 - MIR SINE MIR -71 191 129 266 377 37 33 chr10 13283149 13283343 -127033422 + L2 LINE L2 2620 2817 -497 4209 155 32 24 chr10 13283343 13284122 -127032643 - LTR1 LTR ERV1 0 785 1 266 377 37 33 chr10 13284122 13284171 -127032594 + L2 LINE L2 2817 2864 -450 188 314 10 49 chr10 13284276 13284378 -127032387 + L2 LINE L2 2998 3095 -177 2154 99 10 0 chr10 13284378 13284672 -127032093 - AluSx SINE Alu -15 297 1 482 136 37 12 chr10 13284854 13284935 -127031830 - MER105 DNA DNA -1 203 121 875 187 5 40 chr10 13285046 13285244 -127031521 + AluJb SINE Alu 119 309 -3 2190 125 3 0 chr10 13285391 13285687 -127031078 + AluSq SINE Alu 1 297 -16 186 350 10 20 chr10 13286161 13286261 -127030504 + MIR SINE MIR 164 262 0 193 269 0 0 chr10 13286404 13286456 -127030309 - L2 LINE L2 -218 3054 3003 3691 132 9 0 chr10 13286531 13287055 -127029710 - MER1A DNA MER1_type 0 529 1 414 316 35 12 chr10 13287095 13287266 -127029499 - L2 LINE L2 -1289 2025 1851 712 202 34 51 chr10 13287266 13287444 -127029321 + MER63B DNA MER1_type 1 175 -261 1407 209 16 32 chr10 13287813 13288020 -127028745 - MER82 DNA MER2_type -145 508 306 2421 111 16 14 chr10 13288020 13288391 -127028374 + THE1C LTR MaLR 1 372 -3 1407 209 16 32 chr10 13288391 13288498 -127028267 - MER82 DNA MER2_type -347 306 199 7143 122 12 35 chr10 13288500 13289599 -127027166 + HSMAR2 DNA Mariner 3 1077 -225 2142 90 21 0 chr10 13289599 13289888 -127026877 + AluSc SINE Alu 1 295 -14 7143 122 12 35 chr10 13289888 13289932 -127026833 + HSMAR2 DNA Mariner 1077 1120 -182 2062 127 0 0 chr10 13290434 13290741 -127026024 - AluSx SINE Alu 0 307 1 2116 82 7 41 chr10 13290882 13291199 -127025566 - AluSq SINE Alu 0 307 1 310 183 42 28 chr10 13291622 13291693 -127025072 - L1MC3 LINE L1 -607 7178 7107 357 110 0 122 chr10 13291849 13291901 -127024864 - MLT2C2 LTR ERVL -8 456 416 528 56 0 0 chr10 13291901 13291973 -127024792 + (TCTA)n Simple_repeat Simple_repeat 3 74 0 357 110 0 122 chr10 13291973 13292002 -127024763 - MLT2C2 LTR ERVL -48 416 385 215 61 30 0 chr10 13292012 13292045 -127024720 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 462 308 30 21 chr10 13292047 13292281 -127024484 - HAL1 LINE L1 -864 1643 1408 418 72 78 24 chr10 13292370 13292536 -127024229 + (TA)n Simple_repeat Simple_repeat 1 175 0 462 73 104 9 chr10 13292555 13292981 -127023784 + (TA)n Simple_repeat Simple_repeat 1 466 0 377 300 52 47 chr10 13293112 13293173 -127023592 - MIR SINE MIR -56 206 147 1863 170 0 0 chr10 13293173 13293473 -127023292 - AluJo SINE Alu -12 300 1 377 300 52 47 chr10 13293473 13293604 -127023161 - MIR SINE MIR -115 147 16 2071 122 7 0 chr10 13293818 13294112 -127022653 - AluSx SINE Alu -11 301 6 198 0 0 0 chr10 13295029 13295051 -127021714 + (C)n Simple_repeat Simple_repeat 1 22 0 182 257 9 0 chr10 13295498 13295603 -127021162 + (CA)n Simple_repeat Simple_repeat 2 107 0 469 235 6 6 chr10 13295670 13295840 -127020925 + (CA)n Simple_repeat Simple_repeat 2 171 0 492 297 46 14 chr10 13296967 13297186 -127019579 - MIR SINE MIR -1 261 36 1545 112 9 9 chr10 13297496 13297720 -127019045 + AluSq SINE Alu 1 224 -89 511 289 129 4 chr10 13298791 13299023 -127017742 - MIR SINE MIR 0 262 2 2215 99 3 13 chr10 13299433 13299736 -127017029 - AluSc SINE Alu -9 300 1 2133 130 0 0 chr10 13299823 13300122 -127016643 + AluSx SINE Alu 1 299 -13 458 71 0 192 chr10 13300529 13300628 -127016137 + MADE1 DNA Mariner 1 80 0 5624 150 12 2 chr10 13300855 13302557 -127014208 - L1PB1 LINE L1 -161 5990 4270 764 114 9 9 chr10 13302759 13302873 -127013892 + FLAM_C SINE Alu 2 115 -18 2285 94 7 0 chr10 13303404 13303701 -127013064 - AluSc SINE Alu -10 299 1 1520 166 43 17 chr10 13304362 13304663 -127012102 + AluJo SINE Alu 1 309 -3 536 229 92 52 chr10 13305023 13305411 -127011354 + L1M4 LINE L1 4211 4582 -1564 1641 163 45 0 chr10 13305411 13305699 -127011066 + AluSq SINE Alu 1 301 -12 536 229 92 52 chr10 13305699 13305925 -127010840 + L1M4 LINE L1 4582 4798 -1348 2152 119 0 7 chr10 13305925 13306219 -127010546 + AluSx SINE Alu 1 292 -20 536 229 92 52 chr10 13306219 13306369 -127010396 + L1M4 LINE L1 4798 5192 -954 2374 94 0 3 chr10 13306381 13306690 -127010075 + AluSg SINE Alu 1 308 -2 1139 187 113 14 chr10 13306696 13306979 -127009786 - L1ME LINE L1 -426 5740 5430 427 182 26 0 chr10 13307027 13307104 -127009661 - L1MC2 LINE L1 -32 6312 6234 365 138 0 0 chr10 13307872 13307930 -127008835 + MER53 DNA DNA 9 66 -123 231 170 64 0 chr10 13308656 13308703 -127008062 - L2 LINE L2 0 3272 3223 378 282 147 6 chr10 13308980 13309143 -127007622 + MER5A DNA MER1_type 4 189 0 464 303 27 21 chr10 13309151 13309339 -127007426 - MER5A DNA MER1_type 0 189 1 189 0 0 0 chr10 13310370 13310391 -127006374 + (A)n Simple_repeat Simple_repeat 1 21 0 432 248 30 15 chr10 13310426 13310559 -127006206 + HAL1 LINE L1 2036 2170 -337 238 250 43 11 chr10 13310594 13310686 -127006079 + HAL1 LINE L1 2245 2339 -168 2440 92 3 0 chr10 13310695 13310999 -127005766 + AluSx SINE Alu 1 305 -7 1977 269 105 3 chr10 13311188 13311872 -127004893 + L2 LINE L2 2216 2969 -345 2226 101 0 3 chr10 13311876 13312199 -127004566 - AluSq SINE Alu 0 313 1 2420 73 3 13 chr10 13313558 13313871 -127002894 + AluY SINE Alu 1 310 -1 216 234 125 0 chr10 13313935 13313999 -127002766 + MIR SINE MIR 112 183 -79 247 303 44 3 chr10 13314659 13314793 -127001972 - MIR SINE MIR -7 201 57 2129 31 15 11 chr10 13315152 13315413 -127001352 - L1PA5 LINE L1 0 6154 5893 1633 134 4 4 chr10 13315417 13315655 -127001110 - AluSx SINE Alu -45 267 30 554 117 11 21 chr10 13316233 13316327 -127000438 + FRAM SINE Alu 74 166 -10 1347 239 30 18 chr10 13317100 13317463 -126999302 + LTR10C LTR ERV1 188 479 -26 283 133 0 0 chr10 13317702 13317747 -126999018 + L2 LINE L2 3226 3270 -2 379 254 85 38 chr10 13318027 13318264 -126998501 - L2 LINE L2 -290 3023 2764 2094 128 7 0 chr10 13318457 13318761 -126998004 - AluSg SINE Alu -4 306 1 199 280 43 21 chr10 13318937 13319030 -126997735 + L3 LINE CR1 1065 1159 -418 1910 145 0 7 chr10 13319328 13319625 -126997140 - AluJo SINE Alu -17 295 1 315 237 41 62 chr10 13320290 13320387 -126996378 - HAL1 LINE L1 -1 2506 2412 305 297 51 0 chr10 13321546 13321664 -126995101 + MIR SINE MIR 57 180 -82 2130 138 0 0 chr10 13322042 13322340 -126994425 + AluSx SINE Alu 1 298 -14 2840 226 62 35 chr10 13322623 13323587 -126993178 - L1ME1 LINE L1 -5 6161 5170 1820 210 32 22 chr10 13323578 13323645 -126993120 - L1MB8 LINE L1 -1 6177 6112 * 2218 98 7 3 chr10 13323645 13323940 -126992825 - AluSq SINE Alu -17 296 1 1820 210 32 22 chr10 13323940 13324333 -126992432 - L1MB8 LINE L1 -66 6112 5712 208 283 170 9 chr10 13327263 13327369 -126989396 + L2 LINE L2 3142 3264 -8 1478 205 27 27 chr10 13327843 13328214 -126988551 + MER93b LTR ERV1 1 371 -2 720 186 161 12 chr10 13328508 13328669 -126988096 - MER45C DNA AcHobo 0 953 769 321 26 0 0 chr10 13330007 13330045 -126986720 + (CA)n Simple_repeat Simple_repeat 2 39 0 2267 104 3 0 chr10 13330199 13330498 -126986267 + AluY SINE Alu 3 302 -9 1957 127 36 7 chr10 13332176 13332484 -126984281 + AluSx SINE Alu 1 316 0 499 173 19 10 chr10 13333014 13333118 -126983647 + FLAM_C SINE Alu 4 108 -35 207 269 341 24 chr10 13333342 13333509 -126983256 - MIR SINE MIR -33 229 10 2068 113 0 20 chr10 13334480 13334782 -126981983 - AluSx SINE Alu -16 296 1 183 80 0 0 chr10 13335523 13335548 -126981217 + (TG)n Simple_repeat Simple_repeat 1 25 0 208 293 130 51 chr10 13335892 13336071 -126980694 - L2 LINE L2 -5 3308 3108 1667 166 32 7 chr10 13336071 13336349 -126980416 + AluJo SINE Alu 1 285 -27 208 293 130 51 chr10 13336349 13336384 -126980381 - L2 LINE L2 -205 3108 3077 3297 154 11 9 chr10 13336867 13337431 -126979334 - L1PB4 LINE L1 0 6156 5592 340 106 0 61 chr10 13337704 13337770 -126978995 - Alu SINE Alu -1 299 238 374 77 0 0 chr10 13337901 13337953 -126978812 + Alu SINE Alu 248 299 -1 2340 134 64 43 chr10 13338283 13338702 -126978063 - MSTC LTR MaLR 0 428 1 656 283 23 12 chr10 13340217 13340390 -126976375 + MER5B DNA MER1_type 1 175 -3 1985 167 123 5 chr10 13340391 13340774 -126975991 - MSTA LTR MaLR 0 428 1 384 316 81 0 chr10 13341361 13341497 -126975268 - MIR3 SINE MIR -6 202 56 1376 160 0 13 chr10 13341632 13341863 -126974902 + AluJb SINE Alu 78 305 -7 239 343 59 10 chr10 13342266 13342368 -126974397 - MIR SINE MIR -64 144 38 2191 86 0 0 chr10 13342491 13342771 -126973994 + AluSc SINE Alu 1 280 -29 279 0 0 0 chr10 13342774 13342805 -126973960 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 503 157 139 0 chr10 13342860 13342975 -126973790 + MER105 DNA DNA 17 147 -57 2196 106 7 0 chr10 13343277 13343580 -126973185 + AluSq SINE Alu 1 305 -8 1875 122 10 22 chr10 13343587 13343898 -126972867 + AluSg SINE Alu 3 309 -1 509 333 30 14 chr10 13344016 13344256 -126972509 - MIR SINE MIR -2 260 18 260 306 37 37 chr10 13345258 13345366 -126971399 + MLT1K LTR MaLR 481 588 0 3059 140 32 45 chr10 13346543 13346825 -126969940 - MER1A DNA MER1_type -2173 527 254 2026 137 0 0 chr10 13346825 13347124 -126969641 - AluSx SINE Alu -13 299 1 3059 140 32 45 chr10 13347124 13347375 -126969390 - MER1A DNA MER1_type -2446 254 1 2095 116 0 3 chr10 13347424 13347735 -126969030 + AluSg SINE Alu 1 310 0 401 305 34 99 chr10 13348106 13348368 -126968397 - L3 LINE CR1 -863 714 470 217 236 109 0 chr10 13348375 13348430 -126968335 - L2 LINE L2 -4 3268 3208 1997 133 3 0 chr10 13348653 13348962 -126967803 - AluSx SINE Alu -2 310 1 1803 168 13 7 chr10 13349075 13349385 -126967380 - AluJb SINE Alu 0 312 1 390 148 0 0 chr10 13349456 13349517 -126967248 + AluS SINE Alu 1 61 -242 1821 85 4 31 chr10 13349823 13350081 -126966684 - AluSc SINE Alu -58 251 1 1146 161 57 0 chr10 13350445 13350656 -126966109 - L1PB4 LINE L1 0 6156 5934 1789 115 3 49 chr10 13350755 13351059 -126965706 + AluSx SINE Alu 7 296 -16 472 303 29 111 chr10 13351279 13351622 -126965143 + L2 LINE L2 2957 3271 -1 773 196 25 6 chr10 13351629 13351792 -126964973 + FRAM SINE Alu 1 166 0 684 0 0 0 chr10 13351918 13351994 -126964771 + (CTTAT)n Simple_repeat Simple_repeat 5 80 0 1684 151 22 7 chr10 13351999 13352277 -126964488 - AluSx SINE Alu -30 282 1 374 0 22 0 chr10 13352331 13352377 -126964388 + (TTCA)n Simple_repeat Simple_repeat 2 48 0 1306 127 25 118 chr10 13353151 13353466 -126963299 + AluYb8 SINE Alu 1 286 -32 428 0 19 0 chr10 13353467 13353519 -126963246 + (CAAA)n Simple_repeat Simple_repeat 2 54 0 204 40 0 0 chr10 13353576 13353601 -126963164 + (T)n Simple_repeat Simple_repeat 1 25 0 798 156 0 84 chr10 13354139 13354293 -126962472 - FRAM SINE Alu -42 134 1 1002 232 119 55 chr10 13354983 13355418 -126961347 + MLT2B1 LTR ERVL 2 464 -56 1653 151 0 70 chr10 13355423 13355735 -126961030 + AluJo SINE Alu 6 295 -17 2028 107 0 3 chr10 13355735 13356023 -126960742 + AluSc SINE Alu 19 306 -3 231 156 44 0 chr10 13356058 13356103 -126960662 + MLT2B1 LTR ERVL 462 508 -12 251 252 36 63 chr10 13356201 13356312 -126960453 - MIR3 SINE MIR -32 176 69 1955 60 0 4 chr10 13356666 13356917 -126959848 - AluY SINE Alu -14 297 48 2175 110 0 3 chr10 13357142 13357451 -126959314 + AluSq SINE Alu 1 308 -5 1916 75 11 19 chr10 13357735 13358002 -126958763 + AluY SINE Alu 10 274 -37 1198 153 13 55 chr10 13358143 13358379 -126958386 - AluJo SINE Alu -13 299 74 2239 105 0 0 chr10 13358752 13359056 -126957709 - AluSx SINE Alu -8 304 1 1892 83 8 4 chr10 13359969 13360221 -126956544 - AluSx SINE Alu -59 253 1 414 103 0 0 chr10 13360432 13360500 -126956265 - L1PB3 LINE L1 -7 6147 6080 2212 100 0 0 chr10 13360501 13360800 -126955965 - AluSq SINE Alu -6 307 9 970 185 67 0 chr10 13360917 13361095 -126955670 + MER58A DNA MER1_type 35 224 0 290 299 22 51 chr10 13361102 13361239 -126955526 - L2 LINE L2 -189 3083 2951 247 295 0 0 chr10 13361386 13361447 -126955318 - MIR SINE MIR -17 245 185 2185 79 3 3 chr10 13362123 13362413 -126954352 + AluSg SINE Alu 1 290 -20 1867 194 52 2 chr10 13362519 13362953 -126953812 - MER89 LTR ERV1 -1 558 3 410 271 50 9 chr10 13363249 13363378 -126953387 + MIR3 SINE MIR 74 208 0 236 264 14 14 chr10 13363500 13363572 -126953193 - L2 LINE L2 -3 3310 3239 1659 162 3 29 chr10 13363589 13363897 -126952868 + AluJo SINE Alu 1 300 -12 1709 131 0 40 chr10 13364801 13365098 -126951667 + AluJb SINE Alu 1 285 -27 193 214 0 29 chr10 13365123 13365193 -126951572 + (TATATG)n Simple_repeat Simple_repeat 3 70 0 282 56 0 0 chr10 13365209 13365245 -126951520 + (CA)n Simple_repeat Simple_repeat 2 37 0 282 233 0 47 chr10 13365245 13365331 -126951434 - L1MC4 LINE L1 -1347 6695 6614 237 291 23 0 chr10 13365255 13365341 -126951424 + L1MC4 LINE L1 6614 6701 -1341 * 353 231 74 116 chr10 13366505 13366626 -126950139 - MER5B DNA MER1_type 0 178 63 1953 132 36 0 chr10 13417158 13417438 -126899327 - AluSq SINE Alu -23 290 1 2274 78 7 17 chr10 13417443 13417737 -126899028 - AluY SINE Alu -20 291 1 201 200 20 0 chr10 13417753 13417803 -126898962 + (TA)n Simple_repeat Simple_repeat 1 51 0 2580 54 9 9 chr10 13417803 13418135 -126898630 - L1PA5 LINE L1 -9 6145 5814 1076 169 0 0 chr10 13418157 13418329 -126898436 + AluSg/x SINE Alu 134 305 -5 1729 137 22 11 chr10 13418332 13418602 -126898163 - AluJo SINE Alu -31 281 9 1076 148 0 101 chr10 13419688 13419897 -126896868 - MLT2B3 LTR ERVL 0 554 367 2216 97 20 0 chr10 13420146 13420446 -126896319 + AluSq SINE Alu 1 306 -7 591 118 12 0 chr10 13420455 13420540 -126896225 + L1PA6 LINE L1 11 96 -6050 34075 67 8 7 chr10 13420540 13425843 -126890922 + L1PA6 LINE L1 847 6154 0 813 235 7 0 chr10 13426672 13426825 -126889940 + MER63A DNA MER1_type 41 194 -16 231 246 79 35 chr10 13426917 13427031 -126889734 - L1ME3 LINE L1 -81 6081 5963 1499 232 50 86 chr10 13427097 13427135 -126889630 - L1ME3 LINE L1 -219 5951 5913 2401 102 0 0 chr10 13427135 13427440 -126889325 + AluSq SINE Alu 1 305 -8 1499 232 50 86 chr10 13427440 13427473 -126889292 - L1ME3 LINE L1 -257 5913 5880 1927 176 0 0 chr10 13427473 13427769 -126888996 - AluJb SINE Alu -16 296 1 1499 232 50 86 chr10 13427769 13427842 -126888923 - L1ME3 LINE L1 -290 5880 5806 1982 169 0 7 chr10 13427842 13428149 -126888616 - AluJb SINE Alu -7 305 1 1499 232 50 86 chr10 13428149 13428199 -126888566 - L1ME3 LINE L1 -364 5806 5756 766 244 76 10 chr10 13428199 13428396 -126888369 - MER63A DNA MER1_type 0 210 1 1499 232 50 86 chr10 13428396 13428762 -126888003 - L1ME3 LINE L1 -414 5756 5417 2597 50 0 3 chr10 13428762 13429061 -126887704 - AluSx SINE Alu -14 298 1 1499 232 50 86 chr10 13429061 13429216 -126887549 - L1ME3 LINE L1 -753 5417 5258 2155 119 0 0 chr10 13429547 13429833 -126886932 - AluSg SINE Alu -24 286 1 2275 128 0 0 chr10 13430202 13430514 -126886251 + AluSx SINE Alu 1 312 0 1145 219 191 45 chr10 13430514 13430697 -126886068 + L1MC4a LINE L1 5517 5672 -2136 2540 71 0 7 chr10 13430697 13431007 -126885758 + AluY SINE Alu 2 309 -2 1145 219 191 45 chr10 13431007 13431358 -126885407 + L1MC4a LINE L1 5672 6129 -1679 649 266 107 29 chr10 13431706 13432281 -126884484 + L1MC5 LINE L1 6554 7386 -575 2070 125 4 0 chr10 13432782 13433097 -126883668 - AluSq SINE Alu 0 316 1 2733 99 59 0 chr10 13433156 13433560 -126883205 - MSTA LTR MaLR 0 428 1 941 198 0 0 chr10 13433561 13433718 -126883047 - FRAM SINE Alu -9 157 1 1004 221 91 80 chr10 13433788 13434191 -126882574 - MLT1J LTR MaLR -44 467 54 1984 153 0 0 chr10 13434191 13434504 -126882261 + AluSx SINE Alu 1 313 0 1004 221 91 80 chr10 13434504 13434559 -126882206 - MLT1J LTR MaLR -457 54 1 1386 93 0 0 chr10 13434768 13434940 -126881825 - AluSc SINE Alu -11 298 127 227 81 0 0 chr10 13434940 13434977 -126881788 + L1MA9 LINE L1 6263 6299 -13 2137 129 0 3 chr10 13436839 13437134 -126879631 - AluSx SINE Alu -18 294 1 219 222 19 0 chr10 13437424 13437478 -126879287 + MER5C DNA MER1_type 70 124 -200 404 269 9 19 chr10 13437641 13437749 -126879016 - MER94 DNA DNA -1 133 27 1882 105 72 11 chr10 13437749 13438026 -126878739 + AluSx SINE Alu 1 294 -18 739 323 40 8 chr10 13438081 13438546 -126878219 + ERVL LTR ERVL 1732 2278 -3486 1164 178 84 41 chr10 13438573 13438916 -126877849 + L1M4 LINE L1 1225 1582 -4960 696 186 103 44 chr10 13438892 13439096 -126877669 + L1MB7 LINE L1 6451 6666 -16 * 408 195 11 0 chr10 13439426 13439513 -126877252 - L1MB2 LINE L1 -16 6155 6068 299 279 87 10 chr10 13439653 13439757 -126877008 + L2 LINE L2 3136 3247 -25 217 224 20 0 chr10 13440771 13440820 -126875945 - MER5B DNA MER1_type -1 177 128 2430 216 67 21 chr10 13441114 13441679 -126875086 - MLT1E LTR MaLR -2 591 1 911 185 212 79 chr10 13442019 13442197 -126874568 - MLT1A2 LTR MaLR 0 374 221 2300 93 10 7 chr10 13442197 13442499 -126874266 - AluSc SINE Alu -6 303 1 911 185 212 79 chr10 13442499 13442650 -126874115 - MLT1A2 LTR MaLR -153 221 1 396 59 0 0 chr10 13442844 13442895 -126873870 + (TCTA)n Simple_repeat Simple_repeat 3 53 0 234 0 0 0 chr10 13442897 13442923 -126873842 + (TCCG)n Simple_repeat Simple_repeat 3 28 0 189 0 0 0 chr10 13444401 13444422 -126872343 + (TCCCC)n Simple_repeat Simple_repeat 2 22 0 1719 182 0 0 chr10 13444425 13444705 -126872060 - AluJb SINE Alu -32 280 1 2182 105 14 0 chr10 13444856 13445141 -126871624 + AluSx SINE Alu 8 296 -16 462 267 47 88 chr10 13445677 13445973 -126870792 - L2 LINE L2 0 3313 3030 2017 111 0 97 chr10 13445978 13446183 -126870582 - AluSc SINE Alu 0 309 149 2279 107 0 0 chr10 13446183 13446474 -126870291 - AluSg SINE Alu -19 291 1 2017 111 0 97 chr10 13446474 13446610 -126870155 - AluSc SINE Alu -160 149 1 887 213 5 35 chr10 13446639 13446841 -126869924 + AluJo SINE Alu 1 196 -116 1019 308 74 2 chr10 13447174 13447567 -126869198 + L2 LINE L2 2240 2660 -654 456 306 133 34 chr10 13447647 13447970 -126868795 + L2 LINE L2 2850 3204 -109 2276 132 5 24 chr10 13447970 13448349 -126868416 + L1PA13 LINE L1 5792 6163 0 183 286 0 0 chr10 13448379 13448421 -126868344 + L2 LINE L2 3193 3234 -79 360 0 0 0 chr10 13448437 13448477 -126868288 + (TG)n Simple_repeat Simple_repeat 2 41 0 537 143 0 0 chr10 13448480 13448557 -126868208 - FLAM SINE Alu -25 118 42 274 237 0 53 chr10 13448600 13448676 -126868089 + L2 LINE L2 3201 3272 0 369 260 9 110 chr10 13448705 13448901 -126867864 - MIR SINE MIR -65 143 6 650 236 39 35 chr10 13448921 13449124 -126867641 - L1ME1 LINE L1 -9 6157 5954 226 330 97 0 chr10 13449182 13449285 -126867480 + MIR SINE MIR 108 220 -42 1426 207 31 63 chr10 13449294 13449676 -126867089 - MLT1A2 LTR MaLR 0 374 5 258 235 2 0 chr10 13449692 13449746 -126867019 - MIR SINE MIR -114 94 40 1742 177 13 29 chr10 13450263 13450574 -126866191 - AluJo SINE Alu -6 306 1 2420 116 8 8 chr10 13450746 13451101 -126865664 - THE1A LTR MaLR 0 355 1 24 0 0 0 chr10 13451124 13451148 -126865617 + AT_rich Low_complexity Low_complexity 1 24 0 463 265 32 70 chr10 13451588 13451773 -126864992 - MIR SINE MIR -56 206 29 261 235 37 12 chr10 13452236 13452317 -126864448 - MLT1K LTR MaLR -4 584 502 366 23 0 0 chr10 13453600 13453643 -126863122 + (CA)n Simple_repeat Simple_repeat 2 44 0 544 285 14 14 chr10 13453645 13453789 -126862976 + MIR3 SINE MIR 40 183 -25 1658 133 0 0 chr10 13453929 13454155 -126862610 + AluSx SINE Alu 1 226 -86 1121 164 187 11 chr10 13454155 13454423 -126862342 - MER51B LTR ERV1 0 377 63 401 209 63 89 chr10 13454425 13454583 -126862182 - MER51B LTR ERV1 -223 154 1 322 230 0 0 chr10 13454583 13454657 -126862108 + AluJ/FRAM SINE Alu 223 296 -6 2247 116 0 19 chr10 13454660 13454978 -126861787 + AluSx SINE Alu 1 312 0 195 69 0 0 chr10 13454982 13455011 -126861754 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 594 251 29 17 chr10 13455125 13455300 -126861465 - MER63A DNA MER1_type -2 208 32 1867 223 58 19 chr10 13455340 13455802 -126860963 + MLT2B1 LTR ERVL 1 480 -40 1956 138 7 10 chr10 13455813 13456110 -126860655 + AluJo SINE Alu 1 296 -16 274 84 4 0 chr10 13456154 13456202 -126860563 + MLT2B2 LTR ERVL 464 507 -8 288 0 0 0 chr10 13457044 13457076 -126859689 + (A)n Simple_repeat Simple_repeat 1 32 0 2175 111 0 0 chr10 13457420 13457724 -126859041 + AluSc SINE Alu 1 304 0 2177 116 0 17 chr10 13458454 13458755 -126858010 + AluJb SINE Alu 1 296 -16 221 359 58 0 chr10 13459805 13459908 -126856857 - MIR3 SINE MIR -50 158 50 2345 93 3 0 chr10 13460994 13461294 -126855471 + AluSc SINE Alu 1 301 -8 732 247 39 0 chr10 13461873 13462055 -126854710 - MER5A DNA MER1_type 0 189 1 640 214 193 32 chr10 13462903 13463090 -126853675 - MER20 DNA MER1_type -2 217 1 2578 80 0 0 chr10 13463487 13463800 -126852965 + AluSq SINE Alu 1 313 0 2100 130 3 0 chr10 13464229 13464513 -126852252 + AluSx SINE Alu 7 291 -21 827 172 240 9 chr10 13464659 13464880 -126851885 - MER31B LTR ERV1 0 466 195 424 258 76 15 chr10 13464886 13465018 -126851747 + MER31B LTR ERV1 35 174 -292 920 205 57 28 chr10 13465023 13465309 -126851456 - LTR9 LTR ERV1 0 612 324 2348 79 3 23 chr10 13465368 13465672 -126851093 - AluSp SINE Alu -5 308 11 289 209 0 30 chr10 13465707 13465774 -126850991 - LTR9 LTR ERV1 -299 313 249 * 361 78 0 16 chr10 13465772 13465836 -126850929 - AluSc SINE Alu 0 299 237 * 1148 150 7 113 chr10 13465835 13466109 -126850656 - LTR9 LTR ERV1 -367 245 1 243 186 0 0 chr10 13466120 13466163 -126850602 + MER31B LTR ERV1 195 237 -229 541 186 64 75 chr10 13466164 13466352 -126850413 - MER31B LTR ERV1 -278 188 3 234 291 187 30 chr10 13466384 13466518 -126850247 + MER5B DNA MER1_type 23 177 -1 3703 93 40 77 chr10 13466542 13466579 -126850186 - MER4A LTR ERV1 0 600 563 2353 100 3 0 chr10 13466579 13466888 -126849877 - AluSq SINE Alu -3 310 1 3703 93 40 77 chr10 13466888 13467276 -126849489 - MER4A LTR ERV1 -37 563 162 189 0 0 0 chr10 13467276 13467297 -126849468 + (TTAG)n Simple_repeat Simple_repeat 2 22 0 2377 91 0 0 chr10 13467297 13467584 -126849181 - AluSp SINE Alu -26 287 1 3703 93 40 77 chr10 13467584 13467779 -126848986 - MER4A LTR ERV1 -436 164 1 215 196 20 39 chr10 13468870 13468921 -126847844 - L2 LINE L2 -13 3259 3210 722 226 113 5 chr10 13469896 13470082 -126846683 - L2 LINE L2 -1 3312 3107 2039 120 4 0 chr10 13470363 13470638 -126846127 - AluSx SINE Alu -33 279 4 2203 134 0 0 chr10 13471163 13471461 -126845304 + AluSx SINE Alu 1 298 -14 195 309 77 111 chr10 13472358 13472565 -126844200 + L2 LINE L2 2970 3169 -103 214 301 14 41 chr10 13472647 13472695 -126844070 - L2 LINE L2 -1 3271 3224 957 216 182 24 chr10 13472695 13472992 -126843773 + MER2 DNA MER2_type 1 344 0 214 301 14 41 chr10 13472992 13473016 -126843749 - L2 LINE L2 -48 3224 3201 2151 103 3 20 chr10 13473022 13473322 -126843443 + AluSx SINE Alu 1 295 -17 839 267 142 69 chr10 13473419 13474024 -126842741 - L2 LINE L2 0 3313 2674 1963 177 18 9 chr10 13474024 13474358 -126842407 + MER1B DNA MER1_type 1 337 0 839 267 142 69 chr10 13474358 13474490 -126842275 - L2 LINE L2 -639 2674 2553 1313 289 143 29 chr10 13475337 13475708 -126841057 - L2 LINE L2 -645 2669 2342 2977 214 34 14 chr10 13475708 13476347 -126840418 + MER82 DNA MER2_type 1 652 -1 1313 289 143 29 chr10 13476347 13476633 -126840132 - L2 LINE L2 -972 2342 1937 2450 84 3 7 chr10 13476642 13476952 -126839813 - AluSp SINE Alu -4 309 1 1804 167 17 3 chr10 13477873 13478160 -126838605 + AluJo SINE Alu 1 291 -21 1945 145 13 13 chr10 13478702 13479005 -126837760 - AluJo SINE Alu -4 308 6 355 296 38 8 chr10 13479321 13479453 -126837312 - L3b LINE CR1 -241 1342 1207 238 295 29 87 chr10 13479546 13479719 -126837046 + MIR3 SINE MIR 41 203 -5 195 293 115 51 chr10 13479766 13479923 -126836842 - L3b LINE CR1 -284 1299 1133 2232 118 14 0 chr10 13480929 13481226 -126835539 - AluSx SINE Alu -11 301 1 27 29 0 0 chr10 13481236 13481270 -126835495 + AT_rich Low_complexity Low_complexity 1 34 0 2469 100 0 0 chr10 13482259 13482570 -126834195 - AluSx SINE Alu -1 311 1 2386 87 10 0 chr10 13483476 13483774 -126832991 - AluSq SINE Alu -12 301 1 934 181 12 0 chr10 13485825 13485991 -126830774 - FRAM SINE Alu -1 175 8 2208 138 0 0 chr10 13486118 13486430 -126830335 + AluSx SINE Alu 1 312 0 2048 84 0 0 chr10 13486994 13487245 -126829520 + AluSg SINE Alu 1 251 -59 604 140 9 9 chr10 13487454 13487561 -126829204 - FRAM SINE Alu -2 174 68 1253 77 38 6 chr10 13488422 13488605 -126828160 - MER30 DNA MER1_type -41 189 1 484 282 28 15 chr10 13488649 13488867 -126827898 + MIR3 SINE MIR 14 235 -27 388 226 34 89 chr10 13488904 13489050 -126827715 + MIR SINE MIR 69 206 -56 191 175 196 41 chr10 13489608 13489705 -126827060 + L2 LINE L2 3145 3256 -16 225 108 0 0 chr10 13489871 13489908 -126826857 + (CA)n Simple_repeat Simple_repeat 1 37 0 1751 171 0 46 chr10 13489984 13490288 -126826477 + AluJo SINE Alu 5 294 -18 3663 180 28 43 chr10 13490547 13491379 -126825386 - L1MB3 LINE L1 0 6183 5365 228 67 0 0 chr10 13492228 13492258 -126824507 + (CA)n Simple_repeat Simple_repeat 1 30 0 969 169 50 41 chr10 13492738 13492957 -126823808 - MLT1A2 LTR MaLR 0 374 154 235 239 0 0 chr10 13492952 13492998 -126823767 - MLT1L LTR MaLR -416 199 154 * 286 319 173 68 chr10 13493133 13493722 -126823043 - L2 LINE L2 -420 2894 2244 232 286 60 12 chr10 13494212 13494296 -126822469 + L2 LINE L2 3174 3261 -11 1706 129 55 80 chr10 13496456 13496767 -126819998 - AluJo SINE Alu -9 303 1 207 234 91 52 chr10 13497472 13497549 -126819216 + L3 LINE CR1 1161 1240 -337 * 417 295 113 82 chr10 13497547 13497866 -126818899 - L2 LINE L2 0 3272 2944 317 195 0 13 chr10 13498660 13498737 -126818028 + GA-rich Low_complexity Low_complexity 2 77 0 207 338 14 14 chr10 13499686 13499760 -126817005 - L2 LINE L2 -3 3269 3196 189 0 0 0 chr10 13500483 13500504 -126816261 + (TCCA)n Simple_repeat Simple_repeat 1 21 0 1103 111 0 6 chr10 13500504 13500684 -126816081 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 778 182 8 4 chr10 13500684 13500934 -126815831 + (TCCA)n Simple_repeat Simple_repeat 1 251 0 201 111 93 37 chr10 13500923 13501031 -126815734 + (TCTA)n Simple_repeat Simple_repeat 4 117 0 * 266 326 36 8 chr10 13501083 13501212 -126815553 - MIR SINE MIR -76 132 42 24 32 0 0 chr10 13501390 13501421 -126815344 + AT_rich Low_complexity Low_complexity 1 31 0 2325 105 0 3 chr10 13501788 13502092 -126814673 - AluSg SINE Alu -7 303 1 303 269 113 56 chr10 13502326 13502486 -126814279 + MIR SINE MIR 92 260 -2 249 333 13 13 chr10 13502565 13502643 -126814122 + L2 LINE L2 3150 3227 -45 1938 77 109 0 chr10 13502683 13502953 -126813812 + AluSx SINE Alu 12 308 0 272 220 17 0 chr10 13503036 13503095 -126813670 + MIR3 SINE MIR 104 163 -45 1875 128 60 0 chr10 13503607 13503898 -126812867 + AluSx SINE Alu 1 307 0 2051 150 0 25 chr10 13503923 13504243 -126812522 + AluJo SINE Alu 1 312 0 2242 81 0 0 chr10 13504250 13504521 -126812244 + AluSc SINE Alu 1 271 -38 2341 100 7 0 chr10 13504626 13504927 -126811838 - AluSq SINE Alu -10 303 1 226 372 71 46 chr10 13505066 13505391 -126811374 - L2 LINE L2 -7 3265 2933 205 286 18 0 chr10 13505509 13505565 -126811200 + L2 LINE L2 3185 3241 -72 206 365 74 14 chr10 13506290 13506438 -126810327 + L2 LINE L2 2176 2332 -982 406 338 70 6 chr10 13507511 13507668 -126809097 + L2 LINE L2 3103 3269 -3 2035 129 33 3 chr10 13507762 13508065 -126808700 + AluSq SINE Alu 1 312 -1 2219 132 0 0 chr10 13508092 13508387 -126808378 + AluSx SINE Alu 1 295 -17 851 102 31 0 chr10 13508420 13508548 -126808217 - L1M2 LINE L1 -815 5476 5345 2767 161 57 40 chr10 13508578 13509129 -126807636 + L1MB1 LINE L1 5556 6119 -49 2053 126 13 10 chr10 13509129 13509438 -126807327 + AluJb SINE Alu 2 311 -1 2767 161 57 40 chr10 13509438 13509488 -126807277 + L1MB1 LINE L1 6119 6167 -1 2252 100 10 0 chr10 13509632 13509931 -126806834 - AluSq SINE Alu -11 302 1 2256 121 0 0 chr10 13511690 13511995 -126804770 + AluSx SINE Alu 1 305 -7 371 353 26 6 chr10 13512215 13512371 -126804394 - MIR3 SINE MIR 0 208 50 1819 127 3 85 chr10 13513105 13513445 -126803320 - AluSx SINE Alu 0 312 1 1801 136 35 49 chr10 13513779 13514125 -126802640 - MLT1A1 LTR MaLR 0 365 25 925 232 34 19 chr10 13514312 13514519 -126802246 - MIR SINE MIR 0 262 53 296 275 8 67 chr10 13514587 13514707 -126802058 + MIR SINE MIR 90 202 -60 252 206 16 32 chr10 13515159 13515222 -126801543 + L2 LINE L2 3203 3264 -8 2228 97 46 65 chr10 13515903 13515945 -126800820 - THE1B LTR MaLR 0 364 323 2418 91 7 10 chr10 13515945 13516254 -126800511 + AluSq SINE Alu 1 308 -5 2228 97 46 65 chr10 13516254 13516582 -126800183 - THE1B LTR MaLR -41 323 1 472 333 41 31 chr10 13516850 13517045 -126799720 + MIR SINE MIR 61 257 -5 1954 103 29 7 chr10 13517045 13517340 -126799425 - AluSx SINE Alu 0 307 7 655 321 67 8 chr10 13517609 13517746 -126799019 - MIR SINE MIR -1 261 103 2260 114 0 0 chr10 13517746 13518045 -126798720 + AluSx SINE Alu 1 299 -13 655 321 67 8 chr10 13518045 13518147 -126798618 - MIR SINE MIR -159 103 8 288 316 103 40 chr10 13518778 13518952 -126797813 + MIR SINE MIR 21 205 -57 186 333 105 0 chr10 13519285 13519390 -126797375 - L2 LINE L2 -822 2492 2377 2041 85 62 0 chr10 13519421 13519679 -126797086 - AluSc SINE Alu -35 274 1 1722 155 48 30 chr10 13520368 13520704 -126796061 - MLT2D LTR ERVL -48 366 25 2324 109 3 0 chr10 13521050 13521353 -126795412 + AluSx SINE Alu 1 304 -8 374 119 194 0 chr10 13524482 13524549 -126792216 + MADE1 DNA Mariner 1 80 0 194 250 143 36 chr10 13525195 13525212 -126791553 - MIR SINE MIR -56 206 192 2222 120 3 3 chr10 13525212 13525512 -126791253 + AluSx SINE Alu 1 300 -12 194 250 143 36 chr10 13525512 13525578 -126791187 - MIR SINE MIR -70 192 114 440 209 41 12 chr10 13526498 13526670 -126790095 + CT-rich Low_complexity Low_complexity 4 180 0 883 88 0 62 chr10 13526670 13526862 -126789903 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 335 182 20 20 chr10 13526912 13527011 -126789754 + CT-rich Low_complexity Low_complexity 2 100 0 1660 149 39 4 chr10 13527022 13527277 -126789488 - AluJo SINE Alu -44 268 5 230 283 9 94 chr10 13527380 13527486 -126789279 + MIR SINE MIR 154 250 -12 2377 69 3 0 chr10 13527669 13527957 -126788808 + AluSq SINE Alu 11 299 -14 2363 87 0 7 chr10 13528753 13529053 -126787712 + AluSc SINE Alu 1 298 -11 508 216 18 0 chr10 13529784 13529895 -126786870 + MER81 DNA DNA 1 113 -1 315 0 0 0 chr10 13530206 13530241 -126786524 + (CA)n Simple_repeat Simple_repeat 2 36 0 2400 67 0 3 chr10 13532107 13532389 -126784376 + AluSc SINE Alu 5 285 -24 216 0 0 0 chr10 13533194 13533218 -126783547 + (A)n Simple_repeat Simple_repeat 1 24 0 2124 107 11 0 chr10 13535811 13536115 -126780650 + AluSg SINE Alu 1 307 0 323 303 136 80 chr10 13536381 13536543 -126780222 + MER91A DNA MER1_type 11 181 -15 183 139 0 0 chr10 13536983 13537019 -126779746 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 265 321 46 18 chr10 13537345 13537454 -126779311 - MIR SINE MIR -7 255 144 271 140 40 140 chr10 13537564 13537664 -126779101 - L2 LINE L2 -510 2804 2715 2121 98 0 7 chr10 13537926 13538240 -126778525 - AluSc SINE Alu 0 309 15 299 128 0 6 chr10 13538240 13538297 -126778468 - AluSc SINE Alu -263 40 1 2049 115 0 21 chr10 13538795 13539081 -126777684 + AluSg SINE Alu 1 280 -30 362 240 83 0 chr10 13539418 13539514 -126777251 - MER5A DNA MER1_type -77 112 9 342 239 125 0 chr10 13539532 13539620 -126777145 + MER5B DNA MER1_type 3 101 -77 285 277 20 40 chr10 13539784 13539885 -126776880 + L2 LINE L2 207 305 -3009 198 71 0 0 chr10 13540053 13540081 -126776684 + (ATTG)n Simple_repeat Simple_repeat 2 29 0 783 247 4 62 chr10 13540091 13540176 -126776589 - MIR SINE MIR -28 234 146 1800 151 26 7 chr10 13540176 13540295 -126776470 + AluJb SINE Alu 1 116 -196 441 0 0 0 chr10 13540295 13540344 -126776421 + (TAA)n Simple_repeat Simple_repeat 2 50 0 1800 151 26 7 chr10 13540344 13540529 -126776236 + AluJb SINE Alu 116 311 -1 783 247 4 62 chr10 13540529 13540616 -126776149 - MIR SINE MIR -116 146 75 663 208 174 94 chr10 13540616 13540977 -126775788 + MLT1B LTR MaLR 1 390 0 783 247 4 62 chr10 13540977 13541030 -126775735 - MIR SINE MIR -187 75 21 1297 229 64 101 chr10 13541172 13541756 -126775009 - MLT1F1 LTR MaLR -4 563 1 1967 122 3 10 chr10 13542136 13542432 -126774333 - AluSx SINE Alu -18 294 1 271 153 0 225 chr10 13543140 13543161 -126773604 - L2 LINE L2 -5 3308 3284 1807 139 0 17 chr10 13543161 13543448 -126773317 + AluJo SINE Alu 1 282 -30 191 36 36 0 chr10 13543451 13543479 -126773286 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1812 161 0 0 chr10 13543487 13543779 -126772986 + AluSx SINE Alu 1 292 -20 271 153 0 225 chr10 13543779 13543855 -126772910 - L2 LINE L2 -39 3274 3223 447 243 59 53 chr10 13544215 13544384 -126772381 + MIR3 SINE MIR 27 196 -12 391 220 60 44 chr10 13544802 13544984 -126771781 - Charlie7 DNA MER1_type 0 2612 2428 845 153 7 0 chr10 13545034 13545205 -126771560 - AluSg/x SINE Alu 0 310 154 463 253 22 51 chr10 13545207 13545289 -126771476 - Charlie7 DNA MER1_type -291 2321 2238 910 181 13 13 chr10 13545289 13545444 -126771321 - FRAM SINE Alu -7 159 5 463 253 22 51 chr10 13545444 13545539 -126771226 - Charlie7 DNA MER1_type -374 2238 2149 214 244 0 0 chr10 13545610 13545655 -126771110 + CT-rich Low_complexity Low_complexity 3 47 0 788 169 0 22 chr10 13546063 13546199 -126770566 - FLAM_A SINE Alu 0 133 1 531 243 176 0 chr10 13546612 13546760 -126770005 - MER5A DNA MER1_type 0 189 16 2224 105 3 0 chr10 13547465 13547770 -126768995 + AluSx SINE Alu 4 309 -3 436 182 252 7 chr10 13549636 13549779 -126766986 - MER5B DNA MER1_type 0 178 1 25 31 0 0 chr10 13549992 13550024 -126766741 + AT_rich Low_complexity Low_complexity 1 32 0 2338 48 0 14 chr10 13550026 13550318 -126766447 + AluY SINE Alu 1 288 -23 1991 113 45 39 chr10 13550459 13550794 -126765971 - THE1B LTR MaLR -27 337 1 395 77 0 0 chr10 13550952 13551004 -126765761 + MADE1 DNA Mariner 1 52 -28 505 308 42 51 chr10 13551032 13551269 -126765496 - MIR SINE MIR -26 236 2 773 141 15 0 chr10 13551936 13552071 -126764694 - L1MB2 LINE L1 -7 6164 6028 436 189 25 90 chr10 13552071 13552119 -126764646 - L1MB4 LINE L1 0 6180 6130 1625 157 48 3 chr10 13552119 13552413 -126764352 - AluJo SINE Alu -5 307 1 436 189 25 90 chr10 13552413 13552486 -126764279 - L1MB4 LINE L1 -50 6130 6067 217 301 97 21 chr10 13553729 13553822 -126762943 + L2 LINE L2 2876 2975 -339 216 298 77 29 chr10 13554069 13554173 -126762592 + L2 LINE L2 3148 3256 -16 580 149 0 0 chr10 13555081 13555168 -126761597 - 5S rRNA rRNA -31 90 4 494 302 152 34 chr10 13555812 13556253 -126760512 - L3 LINE CR1 -35 1542 1050 896 165 192 46 chr10 13556937 13557303 -126759462 + L1MEc LINE L1 2160 2555 -3660 646 235 122 51 chr10 13557501 13557896 -126758869 - L1MC5 LINE L1 -33 7928 7506 2145 109 0 0 chr10 13559375 13559669 -126757096 + AluSg SINE Alu 11 304 -6 824 250 33 9 chr10 13560994 13561206 -126755559 + MER20 DNA MER1_type 1 217 -2 2179 101 7 0 chr10 13561312 13561618 -126755147 + AluSx SINE Alu 1 308 -4 226 233 87 97 chr10 13561789 13561892 -126754873 + MLT2E LTR ERVL 32 133 -495 462 270 20 0 chr10 13562316 13562416 -126754349 - L1MC1 LINE L1 -23 6310 6209 * 647 222 66 14 chr10 13562405 13562617 -126754148 - L1MCa LINE L1 -1586 4840 4618 975 128 61 0 chr10 13562649 13562813 -126753952 - Tigger5 DNA MER2_type -62 2261 2088 259 143 24 0 chr10 13562810 13562852 -126753913 - Tigger5 DNA MER2_type -2229 94 52 * 6503 237 45 26 chr10 13562868 13563838 -126752927 - L1MCa LINE L1 -1810 4616 3666 1717 158 3 13 chr10 13563838 13564141 -126752624 - AluSx SINE Alu -12 300 1 6503 237 45 26 chr10 13564141 13565188 -126751577 - L1MCa LINE L1 -2760 3666 2575 687 187 32 0 chr10 13565189 13565312 -126751453 - FLAM_C SINE Alu -6 127 1 952 183 145 30 chr10 13565323 13565558 -126751207 - AluJo SINE Alu -47 265 4 280 146 21 0 chr10 13565562 13565610 -126751155 - L1MCa LINE L1 -4027 2580 2532 998 167 0 0 chr10 13565610 13565766 -126750999 - AluSg/x SINE Alu -20 292 137 1250 139 120 11 chr10 13565766 13566052 -126750713 - L1MCa LINE L1 -3934 2492 2176 1125 110 0 0 chr10 13566052 13566216 -126750549 - AluY SINE Alu -15 296 133 1688 145 157 15 chr10 13566217 13566733 -126750032 - L1MCa LINE L1 -4242 2184 1495 897 171 6 28 chr10 13566743 13566924 -126749841 - AluJb SINE Alu -14 298 122 334 83 0 0 chr10 13566924 13566972 -126749793 - L1MCa LINE L1 -4963 1463 1416 1351 202 93 39 chr10 13566982 13567032 -126749733 - L1MCa LINE L1 -5875 551 505 1220 182 84 67 chr10 13567032 13567329 -126749436 + AluJo SINE Alu 1 302 0 1351 202 93 39 chr10 13567329 13567634 -126749131 - L1MCa LINE L1 -5921 505 177 453 256 45 0 chr10 13567696 13567829 -126748936 + Charlie4 DNA MER1_type 70 208 -1753 803 159 0 7 chr10 13567847 13567985 -126748780 - FRAM SINE Alu -14 162 26 382 235 37 0 chr10 13567986 13568067 -126748698 + Charlie4 DNA MER1_type 1878 1961 0 341 313 222 22 chr10 13568272 13568821 -126747944 + L2 LINE L2 121 779 -2535 583 261 234 0 chr10 13568864 13569052 -126747713 + MIR SINE MIR 2 233 -29 181 267 81 58 chr10 13569176 13569262 -126747503 + L2 LINE L2 3226 3313 0 1302 155 188 4 chr10 13569732 13569977 -126746788 + AluSc SINE Alu 1 290 -9 180 0 0 0 chr10 13570613 13570633 -126746132 + (T)n Simple_repeat Simple_repeat 1 20 0 3703 104 45 0 chr10 13571348 13571877 -126744888 + MER41A LTR ERV1 2 554 0 925 224 41 25 chr10 13572142 13572485 -126744280 + MER34C LTR ERV1 59 450 -135 992 196 230 31 chr10 13572551 13572709 -126744056 + MER31-int LTR ERV1 877 1002 -3934 2429 186 35 69 chr10 13572709 13573343 -126743422 + LTR9 LTR ERV1 1 612 0 992 196 230 31 chr10 13573343 13573632 -126743133 + MER31-int LTR ERV1 1002 1413 -3523 596 107 0 62 chr10 13573632 13573744 -126743021 + MER4D LTR ERV1 2 106 -766 2231 203 101 55 chr10 13573744 13574329 -126742436 + LTR9 LTR ERV1 1 612 0 * 4772 131 38 16 chr10 13574329 13575080 -126741685 + MER4D LTR ERV1 103 870 -2 459 200 55 0 chr10 13575248 13575358 -126741407 + MER34 LTR ERV1 122 237 -305 336 179 15 15 chr10 13575358 13575425 -126741340 + MER34 LTR ERV1 476 542 0 546 237 63 80 chr10 13575570 13576052 -126740713 + MER57-int LTR ERV1 2102 3183 -1697 540 206 103 12 chr10 13576033 13576198 -126740567 + MER57-int LTR ERV1 2463 2642 -2294 * 1000 252 33 73 chr10 13576294 13576719 -126740046 + MER57-int LTR ERV1 6744 7151 -386 733 253 122 60 chr10 13576760 13577074 -126739691 + MER57A LTR ERV1 60 395 -8 2078 128 0 0 chr10 13577526 13577830 -126738935 - AluSx SINE Alu -8 304 1 268 227 57 68 chr10 13577832 13577920 -126738845 - L2 LINE L2 -1 3312 3226 377 255 154 72 chr10 13578185 13578393 -126738372 - MIR SINE MIR -18 244 20 2335 103 73 6 chr10 13578399 13578740 -126738025 + THE1B LTR MaLR 1 364 0 243 0 0 0 chr10 13578850 13578877 -126737888 + (CA)n Simple_repeat Simple_repeat 1 27 0 2211 51 4 0 chr10 13579111 13579385 -126737380 - AluY SINE Alu -8 303 29 1577 189 117 45 chr10 13579542 13579987 -126736778 + MLT1J LTR MaLR 35 511 0 1294 150 146 31 chr10 13581484 13581744 -126735021 + AluJo SINE Alu 1 290 -12 256 263 105 44 chr10 13581790 13581904 -126734861 - MER112 DNA MER1_type -17 243 123 2111 113 0 0 chr10 13581917 13582217 -126734548 + AluY SINE Alu 12 311 0 477 241 54 0 chr10 13582583 13582695 -126734070 + L2 LINE L2 3192 3309 -4 208 333 82 30 chr10 13583046 13583181 -126733584 + L2 LINE L2 2913 3054 -218 2339 105 51 20 chr10 13583419 13583771 -126732994 - THE1B LTR MaLR -1 363 1 1087 216 84 24 chr10 13584229 13584525 -126732240 - MER58B DNA MER1_type 0 341 28 2659 125 56 0 chr10 13584788 13585196 -126731569 - MSTB1 LTR MaLR -1 431 1 976 186 0 0 chr10 13585945 13586106 -126730659 - FRAM SINE Alu -5 161 1 1676 124 132 0 chr10 13586131 13586397 -126730368 - AluSx SINE Alu -1 301 1 890 109 0 31 chr10 13586405 13586533 -126730232 - FLAM_C SINE Alu -9 124 1 278 201 112 168 chr10 13586817 13587031 -126729734 + MLT1L LTR MaLR 25 226 -389 568 108 0 0 chr10 13587038 13587112 -126729653 + MER31B LTR ERV1 3 76 -390 2111 224 54 56 chr10 13587166 13587795 -126728970 + MER67B LTR ERV1 34 661 0 2250 175 18 48 chr10 13587868 13588223 -126728542 + MSTA LTR MaLR 2 343 -85 1756 118 68 0 chr10 13588223 13588503 -126728262 - AluSx SINE Alu 0 312 14 2250 175 18 48 chr10 13588503 13588587 -126728178 + MSTA LTR MaLR 343 428 0 235 298 114 0 chr10 13588782 13588896 -126727869 + MLT1L LTR MaLR 485 611 -4 425 287 103 17 chr10 13589160 13589334 -126727431 - MLT1K LTR MaLR -244 344 156 2073 119 0 0 chr10 13589563 13589858 -126726907 - AluSx SINE Alu -17 295 1 427 328 0 0 chr10 13590029 13590157 -126726608 - MIR3 SINE MIR -16 192 65 2092 128 0 0 chr10 13590262 13590543 -126726222 + AluSx SINE Alu 1 281 -31 455 0 18 0 chr10 13590543 13590598 -126726167 + (CA)n Simple_repeat Simple_repeat 1 56 0 329 290 71 7 chr10 13591534 13591687 -126725078 + MIR SINE MIR 24 184 -62 2354 95 0 10 chr10 13592729 13593035 -126723730 + AluSc SINE Alu 1 303 -6 1944 127 17 10 chr10 13593986 13594285 -126722480 - AluSx SINE Alu -11 301 1 274 293 208 0 chr10 13594346 13594452 -126722313 + MLT1L LTR MaLR 124 251 -364 308 236 100 9 chr10 13595037 13595147 -126721618 - MIR SINE MIR -30 232 113 560 237 60 84 chr10 13595298 13595547 -126721218 + MLT1J1 LTR MaLR 182 424 -22 2213 84 14 0 chr10 13595942 13596229 -126720536 + AluSg SINE Alu 1 291 -19 404 287 103 17 chr10 13596458 13596632 -126720133 + MLT1K LTR MaLR 156 344 -244 2295 182 19 21 chr10 13597205 13597277 -126719488 - MSTA LTR MaLR 0 428 357 1855 126 65 7 chr10 13597277 13597570 -126719195 + AluSx SINE Alu 1 310 -2 2295 182 19 21 chr10 13597570 13597925 -126718840 - MSTA LTR MaLR -71 357 2 2073 224 54 56 chr10 13597998 13598627 -126718138 - MER67B LTR ERV1 0 661 34 564 108 0 0 chr10 13598681 13598755 -126718010 - MER31B LTR ERV1 -390 76 3 268 195 123 159 chr10 13598762 13598957 -126717808 - MLT1L LTR MaLR -389 226 39 882 109 0 31 chr10 13599260 13599388 -126717377 + FLAM_C SINE Alu 1 124 -9 1666 124 132 0 chr10 13599396 13599662 -126717103 + AluSx SINE Alu 1 301 -1 967 186 0 0 chr10 13599687 13599848 -126716917 + FRAM SINE Alu 1 161 -5 2649 125 56 0 chr10 13600597 13601005 -126715760 + MSTB1 LTR MaLR 1 431 -1 1109 209 84 24 chr10 13601268 13601564 -126715201 + MER58B DNA MER1_type 28 341 0 2333 105 51 20 chr10 13602022 13602374 -126714391 + THE1B LTR MaLR 1 363 -1 2468 97 0 0 chr10 13604209 13604518 -126712247 - AluSg SINE Alu -1 309 1 1721 138 17 38 chr10 13604547 13604836 -126711929 - AluJo SINE Alu -15 297 15 1802 169 7 0 chr10 13605852 13606136 -126710629 + AluJo SINE Alu 1 286 -26 505 164 39 0 chr10 13606302 13606406 -126710359 + L1MB1 LINE L1 6061 6168 0 1955 136 7 14 chr10 13606419 13606698 -126710067 + AluSx SINE Alu 3 279 -33 528 16 0 0 chr10 13606698 13606759 -126710006 + (CA)n Simple_repeat Simple_repeat 1 61 0 234 200 0 20 chr10 13606760 13606810 -126709955 - Charlie7 DNA MER1_type -2525 87 39 1834 154 48 3 chr10 13607046 13607338 -126709427 + AluJo SINE Alu 1 305 -7 1750 126 15 4 chr10 13607640 13607933 -126708832 + AluSq SINE Alu 19 314 0 27 81 0 0 chr10 13608754 13608816 -126707949 + AT_rich Low_complexity Low_complexity 1 62 0 243 61 0 0 chr10 13608868 13608901 -126707864 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 210 37 0 0 chr10 13609657 13609684 -126707081 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2153 104 14 0 chr10 13609687 13609965 -126706800 - AluSx SINE Alu -30 282 1 445 37 0 0 chr10 13610414 13610468 -126706297 + MADE1 DNA Mariner 1 54 -26 403 119 30 0 chr10 13610463 13610530 -126706235 - MADE1 DNA Mariner -11 69 1 * 530 266 112 75 chr10 13611106 13611576 -126705189 - MLT1G1 LTR MaLR 0 595 20 533 269 103 72 chr10 13611580 13611911 -126704854 - MLT1G1-int LTR MaLR -3 1368 1028 375 373 3 24 chr10 13612573 13612860 -126703905 - MLT1G1-int LTR MaLR -827 544 264 347 258 45 0 chr10 13612924 13613013 -126703752 - MLT1G1 LTR MaLR 0 555 463 574 270 83 49 chr10 13613045 13613249 -126703516 - MLT1G1 LTR MaLR -175 420 210 2152 126 3 10 chr10 13613812 13614122 -126702643 + AluSx SINE Alu 3 310 -2 930 188 0 12 chr10 13615479 13615644 -126701121 + FRAM SINE Alu 4 166 0 315 263 51 51 chr10 13615657 13615794 -126700971 - MIR SINE MIR -48 214 78 2714 101 0 8 chr10 13615988 13616355 -126700410 + THE1B LTR MaLR 1 364 0 35113 59 1 3 chr10 13617168 13622415 -126694350 + L1PA5 LINE L1 912 6152 -2 1264 128 6 0 chr10 13622415 13622595 -126694170 + LTR10E LTR ERV1 453 633 0 733 248 78 9 chr10 13622637 13622855 -126693910 + LTR10E-int LTR ERV1 50 282 -6367 2622 128 12 22 chr10 13623111 13623525 -126693240 - MER4E LTR ERV1 -369 410 1 2867 128 27 15 chr10 13623822 13624300 -126692465 + LTR8 LTR ERV1 1 484 -207 363 269 8 15 chr10 13624348 13624482 -126692283 - LTR8 LTR ERV1 -27 664 532 768 155 7 14 chr10 13624909 13625057 -126691708 + MER61-int LTR ERV1 1935 2081 -3136 2387 101 3 0 chr10 13625057 13625363 -126691402 + AluSp SINE Alu 1 307 -6 590 250 92 44 chr10 13625405 13625677 -126691088 + MLT1L LTR MaLR 321 605 -10 227 257 81 0 chr10 13625687 13625761 -126691004 - MIR SINE MIR -112 150 71 696 248 103 92 chr10 13625816 13626349 -126690416 + MER34 LTR ERV1 1 539 -3 3604 251 77 23 chr10 13628160 13628857 -126687908 + L1M3c LINE L1 2136 2794 -4771 2214 121 0 0 chr10 13628857 13629154 -126687611 + AluSg SINE Alu 1 297 -13 297 51 0 0 chr10 13629155 13629194 -126687571 + (CA)n Simple_repeat Simple_repeat 2 40 0 3604 251 77 23 chr10 13629194 13630018 -126686747 + L1M3c LINE L1 2793 3602 -3963 2024 144 29 41 chr10 13630016 13630643 -126686122 + L1MA7 LINE L1 5231 5819 -493 * 70 13 0 0 chr10 13630650 13630727 -126686038 + AT_rich Low_complexity Low_complexity 1 77 0 1028 125 0 24 chr10 13630729 13630897 -126685868 + L1MA7 LINE L1 5803 5966 -325 512 261 8 0 chr10 13631129 13631248 -126685517 + L1MA7 LINE L1 5980 6099 -192 349 167 222 0 chr10 13631298 13631370 -126685395 + Tigger5 DNA MER2_type 2234 2321 -2 936 150 44 0 chr10 13631370 13631550 -126685215 + L1MA8 LINE L1 6101 6288 -3 2145 98 7 36 chr10 13631565 13631872 -126684893 + AluSx SINE Alu 1 298 -14 2225 106 0 10 chr10 13632653 13632955 -126683810 - AluSg SINE Alu -11 299 1 2032 127 3 3 chr10 13633502 13633812 -126682953 + AluSq SINE Alu 1 310 0 248 255 163 1 chr10 13633860 13633988 -126682777 + MIR SINE MIR 8 152 -56 202 333 0 0 chr10 13634046 13634112 -126682653 - L2 LINE L2 -18 3254 3189 182 295 121 68 chr10 13635849 13636039 -126680726 - MIR SINE MIR -7 255 56 228 67 0 0 chr10 13637253 13637283 -126679482 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 994 190 39 0 chr10 13637670 13637849 -126678916 + L1MC1 LINE L1 5992 6177 -156 2187 135 0 3 chr10 13637960 13638271 -126678494 + AluSx SINE Alu 1 310 -2 242 116 23 0 chr10 13638273 13638316 -126678449 + GA-rich Low_complexity Low_complexity 1 44 0 2254 110 7 7 chr10 13638988 13639287 -126677478 - AluSx SINE Alu -13 299 1 207 0 0 0 chr10 13639519 13639542 -126677223 + (GA)n Simple_repeat Simple_repeat 2 24 0 455 213 9 9 chr10 13639842 13639950 -126676815 + MER4A LTR ERV1 1 108 -556 538 166 74 162 chr10 13640035 13640264 -126676501 + MER4A LTR ERV1 140 348 -316 519 183 50 124 chr10 13640297 13640364 -126676401 + MER4C LTR ERV1 275 345 -120 1597 170 76 0 chr10 13640364 13640640 -126676125 - AluJo SINE Alu -15 297 1 519 183 50 124 chr10 13640640 13640774 -126675991 + MER4C LTR ERV1 345 461 -4 279 246 14 0 chr10 13641023 13641092 -126675673 + MIR3 SINE MIR 135 204 -4 840 167 0 0 chr10 13642008 13642140 -126674625 - FLAM_C SINE Alu -1 132 1 2146 113 10 19 chr10 13642145 13642456 -126674309 - AluSq SINE Alu -5 308 1 2358 101 7 3 chr10 13642813 13643120 -126673645 + AluSc SINE Alu 1 308 -1 1462 174 80 27 chr10 13643125 13643472 -126673293 + L1MB1 LINE L1 5799 6168 0 2442 101 3 0 chr10 13643480 13643786 -126672979 + AluSx SINE Alu 1 307 -5 1747 163 34 0 chr10 13643798 13644092 -126672673 + AluSx SINE Alu 2 305 -7 198 0 0 0 chr10 13644095 13644117 -126672648 + (TA)n Simple_repeat Simple_repeat 1 22 0 1977 161 6 0 chr10 13644233 13644544 -126672221 + AluSq SINE Alu 1 313 0 654 159 38 6 chr10 13644595 13644739 -126672026 + L1MD2 LINE L1 5293 5440 -730 2153 134 7 3 chr10 13644739 13645045 -126671720 + AluSx SINE Alu 1 307 -5 4282 175 28 17 chr10 13645050 13645974 -126670791 + L1MB7 LINE L1 5193 6125 -59 3045 203 62 7 chr10 13646140 13646816 -126669949 + L1MD2 LINE L1 5417 6129 -230 1591 60 0 15 chr10 13646817 13647017 -126669748 - AluY SINE Alu -11 300 104 285 118 88 29 chr10 13647086 13647154 -126669611 + MADE1 DNA Mariner 1 72 -8 939 218 23 39 chr10 13647167 13647424 -126669341 + L1MD2 LINE L1 6106 6358 -1 2536 68 3 0 chr10 13647436 13647746 -126669019 + AluY SINE Alu 1 311 0 613 320 120 29 chr10 13648787 13649297 -126667468 + L2 LINE L2 2525 3122 -191 2090 129 11 3 chr10 13649297 13649583 -126667182 - AluSx SINE Alu -20 292 5 613 320 120 29 chr10 13649583 13649789 -126666976 + L2 LINE L2 3122 3308 -5 233 57 29 0 chr10 13650335 13650370 -126666395 + (TTCA)n Simple_repeat Simple_repeat 3 38 0 2147 111 4 0 chr10 13650384 13650664 -126666101 - AluSx SINE Alu -31 281 1 4259 187 60 26 chr10 13650669 13650913 -126665852 + Charlie1a DNA MER1_type 47 281 -2480 2365 73 0 26 chr10 13650913 13651226 -126665539 + AluY SINE Alu 1 305 -6 4259 187 60 26 chr10 13651226 13651907 -126664858 + Charlie1a DNA MER1_type 281 1004 -451 2035 128 0 52 chr10 13652246 13652575 -126664190 - AluSx SINE Alu 0 312 1 270 246 162 7 chr10 13652899 13653041 -126663724 + L1MC4a LINE L1 5843 6006 -1802 2034 138 3 0 chr10 13653057 13653353 -126663412 + AluSx SINE Alu 9 305 -7 2547 113 11 5 chr10 13653369 13653748 -126663017 + L1PB1 LINE L1 5766 6146 -5 264 300 29 0 chr10 13654224 13654328 -126662437 - MIR SINE MIR -66 142 32 2048 129 0 0 chr10 13655061 13655364 -126661401 + AluSx SINE Alu 5 307 0 2307 112 0 3 chr10 13655733 13656037 -126660728 + AluSx SINE Alu 1 303 -9 2106 148 0 0 chr10 13656170 13656475 -126660290 - AluSx SINE Alu -7 305 1 2194 100 0 0 chr10 13657272 13657551 -126659214 - AluSx SINE Alu -15 297 19 2105 116 33 3 chr10 13657699 13658028 -126658737 + L1PA15 LINE L1 5827 6165 0 306 237 13 122 chr10 13658657 13658760 -126658005 - MIR SINE MIR -11 251 169 1286 58 204 0 chr10 13658760 13658951 -126657814 + MER30 DNA MER1_type 1 230 0 306 237 13 122 chr10 13658951 13659003 -126657762 - MIR SINE MIR -93 169 113 277 362 0 0 chr10 13659781 13659886 -126656879 + MIR SINE MIR 47 151 -111 2210 116 0 3 chr10 13659888 13660181 -126656584 + AluSx SINE Alu 1 292 -20 192 341 47 47 chr10 13661662 13661791 -126654974 - MIR SINE MIR -118 144 16 32 67 0 0 chr10 13662494 13662554 -126654211 + GC_rich Low_complexity Low_complexity 1 60 0 222 183 14 56 chr10 13662713 13662784 -126653981 + G-rich Low_complexity Low_complexity 5 72 0 1708 148 37 10 chr10 13663302 13663599 -126653166 - AluJb SINE Alu -3 309 5 1650 170 52 59 chr10 13663634 13664022 -126652743 - MLT1B LTR MaLR -2 388 4 776 269 26 4 chr10 13664156 13664383 -126652382 - MIR SINE MIR -24 238 7 8261 283 53 24 chr10 13664906 13667589 -126649176 - ERVL LTR ERVL -814 4950 2192 1278 285 109 44 chr10 13667597 13668305 -126648460 - ERVL LTR ERVL -3773 1881 1128 603 231 209 0 chr10 13669428 13669610 -126647155 + L1MC4 LINE L1 6460 6679 -1363 4551 203 93 26 chr10 13669668 13670889 -126645876 + L1ME1 LINE L1 3942 5346 -820 2256 122 0 0 chr10 13670889 13671193 -126645572 + AluSx SINE Alu 1 304 -8 4551 203 93 26 chr10 13671193 13671739 -126645026 + L1ME1 LINE L1 5346 5854 -312 2316 109 0 3 chr10 13671823 13672125 -126644640 + AluSg SINE Alu 1 301 -9 6387 158 18 15 chr10 13672131 13673519 -126643246 + L1PA13 LINE L1 4162 5546 -619 1017 114 0 0 chr10 13673569 13673709 -126643056 + AluSg/x SINE Alu 159 298 -14 600 177 8 16 chr10 13673710 13673834 -126642931 + L1PA13 LINE L1 6027 6149 -14 1808 207 106 61 chr10 13674044 13674793 -126641972 + L1MC4 LINE L1 6690 7404 -455 2209 126 3 0 chr10 13674793 13675095 -126641670 + AluSx SINE Alu 2 304 -8 2452 88 10 0 chr10 13675095 13675402 -126641363 + AluY SINE Alu 1 311 0 1808 207 106 61 chr10 13675402 13675679 -126641086 + L1MC4 LINE L1 7403 7858 -1 228 328 39 16 chr10 13676389 13676517 -126640248 - MIR SINE MIR -21 241 111 1591 134 17 10 chr10 13676730 13677021 -126639744 + L1MA2 LINE L1 6011 6303 -1 21 0 0 0 chr10 13677022 13677043 -126639722 + AT_rich Low_complexity Low_complexity 1 21 0 259 323 47 33 chr10 13677432 13677613 -126639152 - MIR3 SINE MIR -64 144 15 2355 122 0 0 chr10 13678156 13678468 -126638297 + AluSx SINE Alu 1 312 0 319 281 73 0 chr10 13678643 13678725 -126638040 - L2 LINE L2 -32 3281 3194 2085 125 0 20 chr10 13679571 13679874 -126636891 + AluSq SINE Alu 1 297 -16 2375 57 0 4 chr10 13679874 13680183 -126636582 + AluY SINE Alu 1 308 0 2064 113 3 3 chr10 13680636 13680950 -126635815 + AluSq SINE Alu 1 314 0 243 61 0 0 chr10 13681885 13681918 -126634847 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 1907 154 0 28 chr10 13683228 13683547 -126633218 - AluJb SINE Alu -2 310 1 315 177 0 0 chr10 13684164 13684226 -126632539 + (TG)n Simple_repeat Simple_repeat 2 63 0 2646 50 0 0 chr10 13684244 13684546 -126632219 + AluY SINE Alu 1 302 -9 247 125 62 0 chr10 13684686 13684734 -126632031 + L1MB7 LINE L1 6133 6183 -1 213 177 15 116 chr10 13685527 13685725 -126631040 + (CGGGG)n Simple_repeat Simple_repeat 2 179 0 * 477 216 28 44 chr10 13685585 13685766 -126630999 + G-rich Low_complexity Low_complexity 1 178 0 388 247 5 54 chr10 13685846 13686032 -126630733 + G-rich Low_complexity Low_complexity 1 177 0 268 177 44 35 chr10 13685976 13686089 -126630676 + (CGCGG)n Simple_repeat Simple_repeat 1 114 0 * 28 71 0 0 chr10 13686148 13686204 -126630561 + GC_rich Low_complexity Low_complexity 1 56 0 273 228 0 0 chr10 13686209 13686288 -126630477 + G-rich Low_complexity Low_complexity 5 83 0 292 226 16 0 chr10 13687056 13687118 -126629647 + L2 LINE L2 3184 3246 -26 1812 155 35 3 chr10 13687560 13687681 -126629084 + AluSx SINE Alu 4 120 -192 216 0 0 0 chr10 13687681 13687705 -126629060 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 1812 155 35 3 chr10 13687705 13687873 -126628892 + AluSx SINE Alu 120 302 -10 1198 137 0 6 chr10 13688075 13688250 -126628515 + MER41C LTR ERV1 1 174 -380 4570 90 9 26 chr10 13688252 13688719 -126628046 + LTR10E LTR ERV1 1 456 -177 11032 41 0 3 chr10 13688719 13690817 -126625948 + L1PA5 LINE L1 4058 6154 0 4570 90 9 26 chr10 13690817 13690993 -126625772 + LTR10E LTR ERV1 456 633 0 840 238 71 8 chr10 13691016 13691256 -126625509 + LTR10E-int LTR ERV1 28 282 -6367 346 213 64 32 chr10 13691494 13691588 -126625177 + LTR10E-int LTR ERV1 975 1071 -5578 261 152 51 0 chr10 13691595 13691674 -126625091 + LTR10E-int LTR ERV1 840 922 -5974 246 164 0 0 chr10 13691988 13692043 -126624722 + GA-rich Low_complexity Low_complexity 2 56 0 1564 106 27 3 chr10 13692097 13692392 -126624373 + LTR10E-int LTR ERV1 1919 2909 -2393 2532 153 38 3 chr10 13692979 13693467 -126623298 + LTR10E-int LTR ERV1 2608 4796 -1853 3150 215 5 12 chr10 13693508 13693820 -126622945 + LTR10E-int LTR ERV1 3375 3683 -3213 7065 112 16 5 chr10 13693820 13694816 -126621949 - LTR13 LTR ERVK 0 1007 1 3150 215 5 12 chr10 13694816 13695076 -126621689 + LTR10E-int LTR ERV1 3683 3943 -2953 381 240 0 10 chr10 13695072 13695172 -126621593 + LTR10E-int LTR ERV1 6550 6648 -1 * 4742 73 5 17 chr10 13695174 13695814 -126620951 + LTR10E LTR ERV1 2 633 0 2210 128 48 29 chr10 13695814 13696067 -126620698 + MER41C LTR ERV1 172 436 -118 2142 109 6 10 chr10 13696067 13696380 -126620385 - AluSp SINE Alu -1 312 1 2210 128 48 29 chr10 13696380 13696502 -126620263 + MER41C LTR ERV1 436 554 0 224 255 20 0 chr10 13697206 13697257 -126619508 - L2 LINE L2 -1384 1930 1879 2103 136 0 0 chr10 13697478 13697786 -126618979 + AluSx SINE Alu 1 308 -4 2062 91 35 0 chr10 13698252 13698539 -126618226 - AluY SINE Alu -14 297 1 2372 70 3 0 chr10 13698916 13699214 -126617551 + AluSp SINE Alu 1 299 -14 575 277 169 0 chr10 13699759 13699925 -126616840 - MER91A DNA MER1_type 0 196 3 1938 112 51 0 chr10 13700534 13700829 -126615936 + AluSx SINE Alu 1 310 -2 440 45 149 0 chr10 13701151 13701218 -126615547 + AluY SINE Alu 226 302 -9 1970 105 21 0 chr10 13701221 13701507 -126615258 - AluSx SINE Alu -18 294 3 2077 128 0 0 chr10 13702679 13702975 -126613790 - AluSx SINE Alu -16 296 1 247 307 13 0 chr10 13703147 13703222 -126613543 + MIR SINE MIR 69 144 -64 975 132 0 0 chr10 13703503 13703639 -126613126 + AluSx SINE Alu 2 137 -175 1250 126 5 0 chr10 13704162 13704353 -126612412 + AluSx SINE Alu 121 312 0 294 73 0 0 chr10 13704830 13704871 -126611894 + (TG)n Simple_repeat Simple_repeat 2 42 0 434 320 107 39 chr10 13704949 13705230 -126611535 - L3 LINE CR1 -20 1557 1258 264 337 47 58 chr10 13705516 13705633 -126611132 + L2 LINE L2 2416 2532 -782 2122 119 0 10 chr10 13705633 13705943 -126610822 - AluSx SINE Alu -5 307 1 264 337 47 58 chr10 13705943 13706015 -126610750 + L2 LINE L2 2532 2603 -711 * 533 250 0 37 chr10 13706009 13706145 -126610620 + L2 LINE L2 3179 3309 -4 194 388 16 8 chr10 13706387 13706508 -126610257 + L2 LINE L2 2914 3035 -237 264 85 0 43 chr10 13706636 13706683 -126610082 + L2 LINE L2 3227 3271 -1 28 71 0 0 chr10 13706944 13707000 -126609765 + AT_rich Low_complexity Low_complexity 1 56 0 269 348 146 33 chr10 13708919 13709115 -126607650 + L2 LINE L2 1971 2143 -1171 2887 97 39 9 chr10 13709115 13709465 -126607300 - L1PB1 LINE L1 0 6151 5813 429 76 0 0 chr10 13709465 13709531 -126607234 + (TA)n Simple_repeat Simple_repeat 2 67 0 1830 127 6 44 chr10 13709536 13709851 -126606914 - AluSc SINE Alu -6 303 1 2887 97 39 9 chr10 13709851 13709927 -126606838 - L1PB1 LINE L1 -341 5810 5706 269 348 146 33 chr10 13709927 13710092 -126606673 + L2 LINE L2 2143 2373 -941 2033 146 39 33 chr10 13710122 13710202 -126606563 + MLT1A1 LTR MaLR 1 79 -286 2044 203 59 67 chr10 13710202 13710758 -126606007 - MLT2B3 LTR ERVL -2 552 1 2033 146 39 33 chr10 13710758 13711040 -126605725 + MLT1A1 LTR MaLR 79 365 0 2447 88 36 36 chr10 13712568 13712932 -126603833 - THE1B LTR MaLR 0 364 1 212 279 38 51 chr10 13713051 13713130 -126603635 - MIR3 SINE MIR -25 183 106 351 0 0 0 chr10 13713703 13713742 -126603023 + (ATG)n Simple_repeat Simple_repeat 2 40 0 1908 98 8 0 chr10 13713748 13714003 -126602762 - AluSc SINE Alu -52 257 1 1803 154 0 0 chr10 13714165 13714445 -126602320 + AluJb SINE Alu 17 296 -16 570 181 0 19 chr10 13714682 13714787 -126601978 - L1M3 LINE L1 -492 5688 5586 2069 151 12 12 chr10 13714932 13715269 -126601496 - MER1B DNA MER1_type 0 337 1 880 235 50 32 chr10 13715317 13715598 -126601167 - L1MB8 LINE L1 -7 6171 5886 440 138 0 11 chr10 13715668 13715741 -126601024 + (TTCC)n Simple_repeat Simple_repeat 3 76 -12 1799 144 47 3 chr10 13715741 13716040 -126600725 - AluSx SINE Alu 0 312 1 440 138 0 11 chr10 13716040 13716053 -126600712 + (TTCC)n Simple_repeat Simple_repeat 76 88 0 241 257 14 27 chr10 13716899 13716973 -126599792 - MIR SINE MIR -28 234 162 460 292 26 47 chr10 13716989 13717010 -126599755 - MER46C DNA MER2_type -13 325 305 1977 141 0 0 chr10 13717010 13717308 -126599457 + AluSx SINE Alu 1 298 -14 460 292 26 47 chr10 13717308 13717519 -126599246 - MER46C DNA MER2_type -33 305 98 388 247 0 0 chr10 13717563 13717648 -126599117 - MIR SINE MIR -108 154 70 827 200 12 0 chr10 13717873 13718043 -126598722 - AluJb SINE Alu -1 311 140 2380 84 0 0 chr10 13718284 13718594 -126598171 - AluSg SINE Alu 0 310 1 610 96 19 10 chr10 13718931 13719035 -126597730 + (TCCC)n Simple_repeat Simple_repeat 4 108 0 2245 59 0 10 chr10 13719861 13720151 -126596614 - AluY SINE Alu -24 287 1 1203 187 0 9 chr10 13720187 13720412 -126596353 - AluJo SINE Alu -89 223 1 1917 131 0 13 chr10 13721030 13721328 -126595437 - AluSx SINE Alu -18 294 1 1624 155 0 31 chr10 13721778 13722068 -126594697 + AluJb SINE Alu 1 281 -31 233 57 29 0 chr10 13722082 13722117 -126594648 + (TGAA)n Simple_repeat Simple_repeat 3 38 0 754 322 120 29 chr10 13722663 13722869 -126593896 - L2 LINE L2 -5 3308 3122 1901 130 14 3 chr10 13722869 13723153 -126593612 + AluSx SINE Alu 5 291 -21 754 322 120 29 chr10 13723153 13723663 -126593102 - L2 LINE L2 -191 3122 2525 284 67 0 0 chr10 13724714 13724759 -126592006 - Alu SINE Alu 0 300 256 2205 103 0 0 chr10 13725490 13725792 -126590973 - AluSc SINE Alu -7 302 1 199 244 73 106 chr10 13726176 13726299 -126590466 - L2 LINE L2 -1 3312 3194 262 139 28 0 chr10 13727277 13727349 -126589416 + (TA)n Simple_repeat Simple_repeat 1 74 0 2505 50 0 0 chr10 13728764 13729063 -126587702 - AluY SINE Alu -12 299 1 2125 114 0 3 chr10 13729123 13729430 -126587335 - AluSx SINE Alu -6 306 1 253 217 0 0 chr10 13730754 13730768 -126585997 - L1MA10 LINE L1 0 6334 6321 3796 171 40 20 chr10 13730768 13731656 -126585109 - L1MB5 LINE L1 -5 6161 5227 2557 38 0 19 chr10 13731656 13731971 -126584794 - AluY SINE Alu -2 309 1 3796 171 40 20 chr10 13731971 13732183 -126584582 - L1MB5 LINE L1 -939 5227 5021 472 119 12 60 chr10 13732189 13732273 -126584492 + AluS SINE Alu 220 299 -11 764 156 20 193 chr10 13732273 13732460 -126584305 - L1MB5 LINE L1 -1112 5034 4816 2099 118 26 45 chr10 13732460 13732840 -126583925 - THE1C LTR MaLR 0 375 3 764 156 20 193 chr10 13732840 13733112 -126583653 - L1MB5 LINE L1 -1330 4816 4532 654 213 37 69 chr10 13733087 13733275 -126583490 - L1MB5 LINE L1 -1909 4237 4056 * 863 294 96 0 chr10 13733278 13733571 -126583194 - HAL1 LINE L1 -2179 328 8 2205 103 0 0 chr10 13734357 13734659 -126582106 - AluSc SINE Alu -7 302 1 222 206 39 118 chr10 13735041 13735143 -126581622 - L2 LINE L2 0 3313 3220 285 309 135 29 chr10 13736410 13736617 -126580148 + MIR SINE MIR 5 233 -29 2647 13 0 0 chr10 13737964 13738264 -126578501 - AluY SINE Alu -11 300 1 1761 157 20 0 chr10 13738430 13738730 -126578035 + AluJb SINE Alu 1 306 -6 776 202 0 0 chr10 13738836 13738965 -126577800 - FLAM_C SINE Alu -3 130 2 603 113 160 0 chr10 13739225 13739331 -126577434 - FLAM_C SINE Alu -10 123 1 1540 202 67 35 chr10 13739757 13740218 -126576547 - L1ME LINE L1 -394 5770 5295 2145 110 0 0 chr10 13740236 13740526 -126576239 - AluSx SINE Alu -22 290 1 1265 278 37 7 chr10 13740591 13741027 -126575738 - L1ME LINE L1 -941 5205 4757 1961 98 61 0 chr10 13741040 13741317 -126575448 - AluSc SINE Alu -15 294 1 22 0 0 0 chr10 13741490 13741512 -126575253 + AT_rich Low_complexity Low_complexity 1 22 0 188 245 0 20 chr10 13741779 13741828 -126574937 - L2 LINE L2 -2 3311 3264 2063 99 0 3 chr10 13741828 13742110 -126574655 + AluSg SINE Alu 1 281 -29 487 296 15 27 chr10 13742116 13742345 -126574420 + CT-rich Low_complexity Low_complexity 1 226 0 23 78 0 0 chr10 13742734 13742785 -126573980 + AT_rich Low_complexity Low_complexity 1 51 0 32 26 0 0 chr10 13742925 13742964 -126573801 + AT_rich Low_complexity Low_complexity 1 39 0 928 193 0 6 chr10 13742970 13743131 -126573634 - FRAM SINE Alu -6 160 1 308 125 0 0 chr10 13743135 13743183 -126573582 - AluSq/x SINE Alu -169 133 86 * 1575 191 17 7 chr10 13743178 13743466 -126573299 - MLT1F LTR MaLR -251 291 1 197 348 35 9 chr10 13743575 13743690 -126573075 + MIR SINE MIR 132 249 -13 424 135 0 14 chr10 13744340 13744414 -126572351 + AluJ/FRAM SINE Alu 228 300 -12 1101 139 0 6 chr10 13744565 13744723 -126572042 - AluJb SINE Alu -14 298 142 2211 134 0 0 chr10 13746039 13746345 -126570420 - AluSx SINE Alu -6 306 1 2211 109 16 0 chr10 13746661 13746964 -126569801 - AluSx SINE Alu -4 308 1 635 86 0 0 chr10 13746966 13747047 -126569718 - AluSq/x SINE Alu -182 131 51 1793 160 3 7 chr10 13748161 13748454 -126568311 + AluJo SINE Alu 20 311 -1 2383 93 7 0 chr10 13748464 13748766 -126567999 + AluSg SINE Alu 1 304 -6 202 163 61 0 chr10 13749221 13749234 -126567531 + GA-rich Low_complexity Low_complexity 3 14 -40 2116 133 3 0 chr10 13749234 13749535 -126567230 + AluSx SINE Alu 1 302 -10 202 163 61 0 chr10 13749535 13749570 -126567195 + GA-rich Low_complexity Low_complexity 14 54 0 23 0 0 0 chr10 13749647 13749670 -126567095 + AT_rich Low_complexity Low_complexity 1 23 0 500 255 7 21 chr10 13751150 13751295 -126565470 - L1MB1 LINE L1 -6 6162 6020 843 182 48 18 chr10 13751652 13751817 -126564948 - AluJo SINE Alu -127 185 16 2145 245 126 10 chr10 13751817 13752759 -126564006 - L1M4c LINE L1 -4516 1375 388 315 259 21 70 chr10 13752944 13753087 -126563678 - L1M4c LINE L1 -5507 384 249 232 333 43 26 chr10 13753169 13753286 -126563479 - L1M3d LINE L1 -5253 638 520 1058 309 63 40 chr10 13753352 13753969 -126562796 - L1M3d LINE L1 -5207 684 15 2356 97 3 3 chr10 13754408 13754708 -126562057 + AluSx SINE Alu 1 300 -12 1967 143 3 31 chr10 13755282 13755603 -126561162 + AluSx SINE Alu 1 312 0 23 68 0 0 chr10 13755621 13755665 -126561100 + AT_rich Low_complexity Low_complexity 1 44 0 5573 170 63 132 chr10 13755681 13757534 -126559231 + L1MC2 LINE L1 44 1881 -4545 3275 212 58 45 chr10 13757539 13757783 -126558982 + L1MC2 LINE L1 2251 2490 -3936 2323 117 0 0 chr10 13757783 13758090 -126558675 + AluSg SINE Alu 1 307 -3 3275 212 58 45 chr10 13758090 13758419 -126558346 + L1MC2 LINE L1 2490 2813 -3613 1575 190 23 72 chr10 13758419 13758809 -126557956 + MLT1A2 LTR MaLR 4 374 0 3275 212 58 45 chr10 13758809 13758896 -126557869 + L1MC2 LINE L1 2813 2897 -3529 2288 135 76 22 chr10 13758896 13759010 -126557755 - MSTB1 LTR MaLR 0 432 326 1989 143 28 0 chr10 13759010 13759297 -126557468 - AluSx SINE Alu -17 295 1 2288 135 76 22 chr10 13759297 13759589 -126557176 - MSTB1 LTR MaLR -106 326 4 3275 212 58 45 chr10 13759589 13759855 -126556910 + L1MC2 LINE L1 2897 3158 -3268 1869 129 17 17 chr10 13759855 13760142 -126556623 + AluSx SINE Alu 1 287 -25 294 29 0 0 chr10 13760142 13760177 -126556588 + (TA)n Simple_repeat Simple_repeat 1 35 0 3275 212 58 45 chr10 13760177 13760542 -126556223 + L1MC2 LINE L1 3157 3558 -2868 2285 229 29 24 chr10 13760587 13760704 -126556061 + L1MC2 LINE L1 4648 4763 -1663 2422 100 0 0 chr10 13760704 13761013 -126555752 + AluSq SINE Alu 1 309 -4 2285 229 29 24 chr10 13761013 13761518 -126555247 + L1MC2 LINE L1 4763 5273 -1153 * 3748 125 21 22 chr10 13761514 13761633 -126555132 + L1MC2 LINE L1 5482 5600 -1024 1774 172 14 3 chr10 13761633 13761929 -126554836 + AluJo SINE Alu 1 299 -13 3748 125 21 22 chr10 13761929 13762473 -126554292 + L1MC2 LINE L1 5600 6144 -480 483 115 58 23 chr10 13762473 13762560 -126554205 - LTR49 LTR ERV1 0 595 506 2568 63 3 0 chr10 13762560 13762862 -126553903 + AluSp SINE Alu 1 303 -10 234 0 0 0 chr10 13762862 13762888 -126553877 + (TA)n Simple_repeat Simple_repeat 2 27 0 1610 79 4 109 chr10 13763379 13763645 -126553120 + AluSp SINE Alu 66 303 -10 234 0 0 0 chr10 13763645 13763671 -126553094 + (TA)n Simple_repeat Simple_repeat 2 27 0 1394 152 105 50 chr10 13764013 13764290 -126552475 + AluJb SINE Alu 1 292 -20 2399 109 3 0 chr10 13764634 13764945 -126551820 + AluSx SINE Alu 1 312 0 2187 134 109 14 chr10 13764990 13765395 -126551370 - MER61C LTR ERV1 0 434 6 29760 117 55 37 chr10 13765395 13768536 -126548229 - MER61C-int LTR ERV1 -4 5213 1936 2407 69 3 3 chr10 13768536 13768826 -126547939 - AluSp SINE Alu -23 290 1 29760 117 55 37 chr10 13768826 13770799 -126545966 - MER61C-int LTR ERV1 -3281 1936 2 2113 125 115 18 chr10 13770799 13771183 -126545582 - MER61C LTR ERV1 0 434 14 228 240 0 0 chr10 13771150 13771200 -126545565 - LTR28 LTR ERV1 -958 62 13 * 915 193 6 6 chr10 13771476 13771637 -126545128 + AluJb SINE Alu 133 293 -19 398 316 33 7 chr10 13771637 13771789 -126544976 - MER5A DNA MER1_type -32 157 2 220 284 147 0 chr10 13771871 13771980 -126544785 - L2 LINE L2 0 3313 3189 478 139 9 102 chr10 13772717 13772825 -126543940 + MER4A LTR ERV1 1 98 -566 1851 118 5 57 chr10 13772825 13772995 -126543770 + MER4A LTR ERV1 261 438 -226 1585 96 0 18 chr10 13772995 13773213 -126543552 - AluY SINE Alu -12 299 86 1851 118 5 57 chr10 13773213 13773407 -126543358 + MER4A LTR ERV1 438 664 0 191 222 63 0 chr10 13773480 13773543 -126543222 + MIR SINE MIR 126 192 -70 2179 106 6 13 chr10 13773577 13773888 -126542877 + AluSc SINE Alu 1 309 0 402 290 32 8 chr10 13774143 13774267 -126542498 + MIR SINE MIR 26 152 -110 1851 89 0 0 chr10 13774507 13774743 -126542022 - LTR8 LTR ERV1 0 691 456 375 22 0 0 chr10 13774744 13774789 -126541976 - LTR8 LTR ERV1 -192 499 455 3385 87 26 14 chr10 13774789 13775282 -126541483 - LTR8 LTR ERV1 -192 499 1 4836 131 18 25 chr10 13775579 13776364 -126540401 + MER4E LTR ERV1 1 779 0 218 232 58 0 chr10 13776671 13776740 -126540025 - MIR SINE MIR -70 192 120 223 367 54 31 chr10 13776845 13776998 -126539767 + L2 LINE L2 1814 1962 -1352 1975 134 0 4 chr10 13776998 13777275 -126539490 + AluJo SINE Alu 6 281 -31 223 367 54 31 chr10 13777275 13777470 -126539295 + L2 LINE L2 1962 2170 -1144 198 0 0 0 chr10 13777626 13777648 -126539117 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 2177 89 17 0 chr10 13777698 13777990 -126538775 - AluSc SINE Alu -12 297 1 564 233 60 84 chr10 13778385 13778634 -126538131 - MLT1J1 LTR MaLR -22 424 182 324 227 100 9 chr10 13778785 13778895 -126537870 + MIR SINE MIR 113 232 -30 2169 103 0 10 chr10 13779909 13780200 -126536565 - AluSg SINE Alu -22 288 1 1886 137 17 17 chr10 13780489 13780788 -126535977 - AluJo SINE Alu -13 299 1 257 200 362 29 chr10 13780791 13780896 -126535869 - MIR3 SINE MIR -60 148 9 1036 261 114 19 chr10 13781350 13781710 -126535055 + MLT1J1 LTR MaLR 9 402 -44 623 204 138 22 chr10 13782110 13782183 -126534582 + MLT1H LTR MaLR 3 66 -483 1680 153 29 7 chr10 13782183 13782464 -126534301 + AluJo SINE Alu 11 297 -15 623 204 138 22 chr10 13782464 13782656 -126534109 + MLT1H LTR MaLR 66 310 -239 2057 128 3 0 chr10 13782831 13783119 -126533646 + AluSq SINE Alu 1 289 -24 195 100 0 0 chr10 13783119 13783149 -126533616 + (GGAGA)n Simple_repeat Simple_repeat 2 31 0 403 191 0 24 chr10 13783152 13783236 -126533529 - LTR24B LTR ERV1 -491 85 4 256 277 0 15 chr10 13783285 13783350 -126533415 - L2 LINE L2 -86 3186 3123 1845 130 3 37 chr10 13783617 13783917 -126532848 - AluSx SINE Alu -4 308 19 1834 154 48 3 chr10 13784219 13784511 -126532254 - AluJo SINE Alu -7 305 1 234 200 0 20 chr10 13784747 13784797 -126531968 + Charlie7 DNA MER1_type 39 87 -2525 528 16 0 0 chr10 13784798 13784859 -126531906 + (TG)n Simple_repeat Simple_repeat 1 61 0 1955 136 7 14 chr10 13784859 13785138 -126531627 - AluSx SINE Alu -33 279 3 505 164 39 0 chr10 13785151 13785255 -126531510 - L1MB1 LINE L1 0 6168 6061 1802 169 7 0 chr10 13785421 13785705 -126531060 - AluJo SINE Alu -26 286 1 1721 138 17 38 chr10 13786721 13787010 -126529755 + AluJo SINE Alu 15 297 -15 2460 97 0 0 chr10 13787039 13787347 -126529418 + AluSg SINE Alu 1 308 -2 2631 114 76 36 chr10 13789275 13789305 -126527460 + MER4C LTR ERV1 1 28 -437 2255 97 0 7 chr10 13789305 13789594 -126527171 + AluSc SINE Alu 1 287 -22 2631 114 76 36 chr10 13789594 13790010 -126526755 + MER4C LTR ERV1 28 465 0 347 207 182 16 chr10 13790229 13790350 -126526415 + MER103 DNA DNA 18 158 -8 532 258 84 91 chr10 13790518 13790816 -126525949 + Charlie2 DNA MER1_type 4 299 -2563 2225 196 119 50 chr10 13790847 13791060 -126525705 + Charlie2 DNA MER1_type 1856 2053 -809 2329 87 16 13 chr10 13791060 13791372 -126525393 - AluSq SINE Alu 0 313 1 2028 149 0 0 chr10 13791372 13791673 -126525092 - AluJo SINE Alu -11 301 1 1954 128 0 7 chr10 13791680 13791988 -126524777 - AluSg SINE Alu 0 310 1 2225 196 119 50 chr10 13791988 13792158 -126524607 + Charlie2 DNA MER1_type 2058 2215 -647 1702 136 75 4 chr10 13792158 13792438 -126524327 - AluSc SINE Alu -9 300 1 2225 196 119 50 chr10 13792438 13792840 -126523925 + Charlie2 DNA MER1_type 2215 2706 -156 5101 166 64 7 chr10 13792843 13794173 -126522592 + L1PA16 LINE L1 4488 5933 -233 2004 134 0 6 chr10 13794173 13794486 -126522279 - AluSx SINE Alu -1 311 1 5101 166 64 7 chr10 13794486 13794725 -126522040 + L1PA16 LINE L1 5933 6157 -9 482 203 41 8 chr10 13794733 13794856 -126521909 + Charlie2 DNA MER1_type 2687 2813 -49 2472 48 7 3 chr10 13794858 13795168 -126521597 - AluY SINE Alu 0 311 1 378 355 16 0 chr10 13795591 13795712 -126521053 - MIR SINE MIR -126 136 14 721 113 0 0 chr10 13795869 13795966 -126520799 + AluS SINE Alu 2 98 -215 1804 98 144 0 chr10 13796007 13796271 -126520494 + AluSx SINE Alu 1 302 0 288 0 0 0 chr10 13797055 13797087 -126519678 + (TG)n Simple_repeat Simple_repeat 1 32 0 1745 132 57 0 chr10 13797087 13797352 -126519413 - AluSq SINE Alu -33 280 1 232 280 90 30 chr10 13797847 13797947 -126518818 - MER20B DNA MER1_type -614 169 64 181 321 18 0 chr10 13798024 13798080 -126518685 - MIR SINE MIR -77 131 75 2009 94 0 24 chr10 13798339 13798627 -126518138 - AluSx SINE Alu -17 295 15 2575 95 52 5 chr10 13799387 13799775 -126516990 - L1PA11 LINE L1 0 6174 5769 789 163 0 59 chr10 13799960 13800095 -126516670 - FLAM_C SINE Alu -6 127 1 455 308 98 55 chr10 13800135 13800574 -126516191 + L1MC5 LINE L1 7395 7852 -109 1542 181 35 17 chr10 13800690 13800978 -126515787 + AluJb SINE Alu 1 293 -19 2212 110 0 0 chr10 13800988 13801297 -126515468 + AluSx SINE Alu 1 309 -3 1914 124 3 3 chr10 13801604 13801909 -126514856 - AluSc SINE Alu 0 305 1 216 0 0 0 chr10 13802381 13802405 -126514360 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 2097 118 0 16 chr10 13802716 13803031 -126513734 - AluSx SINE Alu -1 311 2 315 0 0 0 chr10 13803045 13803080 -126513685 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 35001 60 1 2 chr10 13803276 13808522 -126508243 - L1PA5 LINE L1 -1 6153 912 2087 120 7 0 chr10 13809386 13809687 -126507078 - AluSx SINE Alu -9 303 1 2307 72 0 10 chr10 13809916 13810223 -126506542 - AluY SINE Alu -7 304 1 281 299 47 9 chr10 13811017 13811124 -126505641 + L1ME4a LINE L1 5554 5664 -457 3401 190 344 87 chr10 13811338 13811500 -126505265 + L1MA8 LINE L1 1 120 -6930 2536 48 0 0 chr10 13811500 13811811 -126504954 + AluY SINE Alu 1 311 0 3401 190 344 87 chr10 13811811 13812360 -126504405 + L1MA8 LINE L1 120 527 -6523 916 69 0 0 chr10 13812360 13812476 -126504289 - AluSg/x SINE Alu -15 297 182 3401 190 344 87 chr10 13812476 13812548 -126504217 + L1MA8 LINE L1 527 579 -6471 2108 98 17 0 chr10 13812548 13812843 -126503922 - AluSg SINE Alu -10 300 1 3401 190 344 87 chr10 13812843 13813646 -126503119 + L1MA8 LINE L1 579 2133 -4917 * 12876 167 63 12 chr10 13813645 13814247 -126502518 + L1MA8 LINE L1 3587 4157 -3094 1789 147 10 16 chr10 13814247 13814554 -126502211 + AluSx SINE Alu 1 305 -7 12876 167 63 12 chr10 13814554 13817435 -126499330 + L1MA8 LINE L1 4157 7245 -6 503 289 148 30 chr10 13817613 13817986 -126498779 - L2 LINE L2 -5 3308 2892 1967 106 53 0 chr10 13818101 13818384 -126498381 + AluSx SINE Alu 1 298 -14 1792 130 60 3 chr10 13820104 13820389 -126496376 + AluSg SINE Alu 1 301 -9 237 197 171 34 chr10 13820650 13820767 -126495998 + MER103 DNA DNA 33 165 -1 2151 104 3 0 chr10 13821333 13821632 -126495133 - AluSx SINE Alu -11 301 2 347 342 110 57 chr10 13821772 13822126 -126494639 - L2 LINE L2 -3 3269 2897 414 331 34 3 chr10 13822165 13822361 -126494404 - MIR SINE MIR -1 261 61 936 214 77 5 chr10 13823605 13823801 -126492964 - MER58A DNA MER1_type -14 210 1 1780 163 0 7 chr10 13824504 13824811 -126491954 - AluJo SINE Alu -7 305 1 395 289 79 31 chr10 13824923 13825151 -126491614 + L1ME4a LINE L1 5850 6088 -33 182 290 130 22 chr10 13827049 13827187 -126489578 - L2 LINE L2 -277 2995 2843 358 247 31 10 chr10 13827264 13827361 -126489404 - MIR SINE MIR 0 262 164 950 286 40 64 chr10 13827382 13827423 -126489342 - LTR16A LTR ERVL -12 438 398 2154 87 0 19 chr10 13827423 13827732 -126489033 + AluSc SINE Alu 1 303 -6 950 286 40 64 chr10 13827732 13828113 -126488652 - LTR16A LTR ERVL -52 398 26 332 222 10 40 chr10 13828140 13828239 -126488526 - MIR SINE MIR -151 111 16 2279 66 0 41 chr10 13828282 13828599 -126488166 - AluY SINE Alu -7 304 1 2452 122 17 0 chr10 13828766 13829118 -126487647 - THE1B LTR MaLR 0 364 7 676 291 117 7 chr10 13829284 13829593 -126487172 - L1MC4a LINE L1 -1892 5916 5574 528 239 1 39 chr10 13829631 13829797 -126486968 - L1P1 LINE L1 -655 5500 5341 1467 133 26 0 chr10 13832979 13833205 -126483560 + AluSg/x SINE Alu 70 301 -9 574 358 74 39 chr10 13833452 13833561 -126483204 + ERVL LTR ERVL 767 871 -4893 854 212 17 22 chr10 13833561 13833740 -126483025 - MER45A DNA AcHobo 0 178 1 574 358 74 39 chr10 13833740 13834454 -126482311 + ERVL LTR ERVL 871 1619 -4145 411 257 25 20 chr10 13834516 13834761 -126482004 + GA-rich Low_complexity Low_complexity 1 246 0 382 299 34 17 chr10 13834761 13834878 -126481887 + polypurine Low_complexity Low_complexity 1 119 0 195 375 0 0 chr10 13834879 13834935 -126481830 + A-rich Low_complexity Low_complexity 1 56 0 230 360 0 0 chr10 13834936 13834986 -126481779 + G-rich Low_complexity Low_complexity 1 50 0 180 333 0 0 chr10 13834986 13835043 -126481722 + A-rich Low_complexity Low_complexity 1 57 0 1194 181 22 88 chr10 13835551 13835902 -126480863 - LTR29 LTR ERV1 -134 510 137 268 251 0 75 chr10 13835908 13836001 -126480764 - MER34 LTR ERV1 -469 73 3 2301 139 82 13 chr10 13836002 13836454 -126480311 + L1MC2 LINE L1 5860 6342 -2 25 31 0 0 chr10 13836584 13836616 -126480149 + AT_rich Low_complexity Low_complexity 1 32 0 2041 82 3 76 chr10 13836668 13836985 -126479780 - AluSg SINE Alu -16 294 1 1092 110 0 0 chr10 13836985 13837130 -126479635 - AluSq/x SINE Alu -167 145 1 1859 117 24 12 chr10 13837150 13837551 -126479214 + MER4D LTR ERV1 3 482 -421 1852 118 64 4 chr10 13838033 13838313 -126478452 - AluSq SINE Alu -16 297 1 343 248 83 25 chr10 13838714 13838835 -126477930 - MIR SINE MIR -6 256 129 13016 27 1 8 chr10 13838835 13841126 -126475639 + L1PA4 LINE L1 3865 6152 -3 261 164 0 0 chr10 13841134 13841207 -126475558 + (TA)n Simple_repeat Simple_repeat 1 73 0 2439 67 0 3 chr10 13842390 13842702 -126474063 - AluY SINE Alu 0 311 1 233 180 20 20 chr10 13843114 13843164 -126473601 - MER2 DNA MER2_type 0 345 296 203 214 0 32 chr10 13843176 13843302 -126473463 + (CCG)n Simple_repeat Simple_repeat 2 123 0 2126 105 3 9 chr10 13843403 13843718 -126473047 - AluSq SINE Alu 0 313 1 349 302 63 45 chr10 13843881 13844103 -126472662 + L2 LINE L2 2250 2475 -839 369 0 0 0 chr10 13844875 13844916 -126471849 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 2132 66 7 42 chr10 13844916 13845204 -126471561 - AluSg SINE Alu -32 278 1 281 253 36 0 chr10 13845857 13845940 -126470825 - MIR3 SINE MIR -41 167 82 23 0 0 0 chr10 13846383 13846406 -126470359 + GC_rich Low_complexity Low_complexity 1 23 0 252 59 0 0 chr10 13846625 13846659 -126470106 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 596 291 81 62 chr10 13847047 13847367 -126469398 - L2 LINE L2 -511 2803 2478 240 159 48 32 chr10 13847464 13847527 -126469238 + L2 LINE L2 3205 3268 -4 2557 38 14 0 chr10 13847538 13847829 -126468936 + AluY SINE Alu 1 295 -16 1714 148 8 4 chr10 13847828 13848092 -126468673 + AluSx SINE Alu 33 297 -15 * 711 200 8 8 chr10 13848446 13848571 -126468194 - AluSq/x SINE Alu -187 126 2 310 216 72 52 chr10 13848691 13848844 -126467921 - L2 LINE L2 -702 2612 2457 326 244 288 0 chr10 13849189 13849349 -126467416 - MIR SINE MIR -27 235 30 873 138 0 31 chr10 13849517 13849647 -126467118 + FLAM_C SINE Alu 1 126 -17 1622 159 61 52 chr10 13849786 13850113 -126466652 - MER44D DNA MER2_type 0 609 10 2211 134 0 3 chr10 13850333 13850646 -126466119 + AluSx SINE Alu 1 312 0 828 302 186 23 chr10 13850814 13851094 -126465671 - L2 LINE L2 -1619 1695 1462 2459 78 3 0 chr10 13851094 13851390 -126465375 + AluSp SINE Alu 1 297 -16 297 75 0 0 chr10 13851390 13851430 -126465335 + (TA)n Simple_repeat Simple_repeat 2 41 0 828 302 186 23 chr10 13851430 13851613 -126465152 - L2 LINE L2 -1852 1462 1310 1557 153 12 12 chr10 13851613 13851861 -126464904 + AluJo SINE Alu 17 264 -48 828 302 186 23 chr10 13851861 13851872 -126464893 - L2 LINE L2 -2004 1310 1302 201 74 0 0 chr10 13851872 13851899 -126464866 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 828 302 186 23 chr10 13851899 13852325 -126464440 - L2 LINE L2 -2012 1302 645 257 278 0 0 chr10 13852494 13852548 -126464217 - L2 LINE L2 -10 3303 3250 186 286 32 0 chr10 13852725 13852788 -126463977 - L2 LINE L2 -3163 151 87 857 277 98 39 chr10 13853345 13853566 -126463199 + L1ME4a LINE L1 5318 5525 -645 1969 212 62 58 chr10 13853566 13854175 -126462590 + LTR9 LTR ERV1 1 612 0 857 277 98 39 chr10 13854175 13854448 -126462317 + L1ME4a LINE L1 5525 5834 -336 2245 104 0 0 chr10 13854448 13854746 -126462019 - AluSx SINE Alu -14 298 1 857 277 98 39 chr10 13854746 13854796 -126461969 + L1ME4a LINE L1 5834 5880 -290 253 194 32 86 chr10 13855023 13855116 -126461649 + L1ME4a LINE L1 5969 6056 -65 213 65 0 0 chr10 13855415 13855446 -126461319 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 652 136 152 30 chr10 13855448 13855580 -126461185 - L1PA16 LINE L1 -9 6157 6010 1784 154 3 33 chr10 13856508 13856814 -126459951 - AluJo SINE Alu -15 297 1 251 196 0 0 chr10 13857541 13857592 -126459173 + (TG)n Simple_repeat Simple_repeat 2 52 0 1211 202 37 4 chr10 13857709 13857952 -126458813 + AluJo SINE Alu 44 294 -18 189 107 0 0 chr10 13858815 13858843 -126457922 + (AAATG)n Simple_repeat Simple_repeat 3 30 0 1858 114 51 4 chr10 13858875 13859148 -126457617 - AluSx SINE Alu -4 308 23 790 226 31 20 chr10 13859305 13859500 -126457265 - MER3 DNA MER1_type -5 204 8 2371 69 21 0 chr10 13859587 13859875 -126456890 + AluSp SINE Alu 1 294 -19 1597 163 58 11 chr10 13859895 13860172 -126456593 + AluJb SINE Alu 4 293 -19 404 143 0 0 chr10 13860821 13860891 -126455874 - L1 LINE L1 -1456 4690 4621 23 0 0 0 chr10 13861077 13861100 -126455665 + AT_rich Low_complexity Low_complexity 1 23 0 1842 172 14 3 chr10 13861355 13861646 -126455119 + AluJo SINE Alu 1 294 -18 1039 144 80 21 chr10 13862065 13862253 -126454512 - MER46A DNA MER2_type 0 236 38 22 0 0 0 chr10 13862253 13862275 -126454490 + AT_rich Low_complexity Low_complexity 1 22 0 346 214 7 44 chr10 13862287 13862330 -126454435 - LTR57 LTR ERVL 0 411 368 1572 168 80 0 chr10 13862330 13862604 -126454161 + AluJb SINE Alu 1 296 -16 346 214 7 44 chr10 13862604 13862701 -126454064 - LTR57 LTR ERVL -43 368 240 5585 135 45 12 chr10 13862705 13862847 -126453918 - L1 LINE L1 -1007 5139 5003 1952 113 35 7 chr10 13862847 13863129 -126453636 - AluSx SINE Alu -22 290 1 5585 135 45 12 chr10 13863129 13863969 -126452796 - L1 LINE L1 -1143 5003 4125 1183 145 5 20 chr10 13863973 13864173 -126452592 - LTR57 LTR ERVL -214 197 1 2192 121 10 0 chr10 13864712 13865009 -126451756 + AluSx SINE Alu 1 300 -12 359 333 24 30 chr10 13865862 13866030 -126450735 + MIR3 SINE MIR 33 199 -9 2146 99 13 3 chr10 13866133 13866436 -126450329 + L1PA10 LINE L1 5861 6166 -2 1637 197 0 7 chr10 13866932 13867222 -126449543 + AluJo SINE Alu 1 288 -24 1627 161 67 11 chr10 13867921 13868206 -126448559 + AluJb SINE Alu 8 308 -4 1700 179 0 39 chr10 13868430 13868602 -126448163 - AluJb SINE Alu -16 296 140 1925 141 14 10 chr10 13868602 13868899 -126447866 - AluSq SINE Alu -15 298 1 1700 179 0 39 chr10 13868899 13869033 -126447732 - AluJb SINE Alu -172 140 2 891 294 12 8 chr10 13869829 13870081 -126446684 - MER70A LTR ERVL -106 366 114 243 288 98 37 chr10 13870164 13870327 -126446438 - MLT1J LTR MaLR -229 282 110 1854 161 7 3 chr10 13870517 13870802 -126445963 - AluJb SINE Alu -25 287 2 4030 151 37 23 chr10 13871376 13871451 -126445314 - L1MB7 LINE L1 0 6184 6112 2095 154 0 0 chr10 13871451 13871757 -126445008 + AluSx SINE Alu 1 306 -6 4030 151 37 23 chr10 13871757 13872417 -126444348 - L1MB7 LINE L1 -72 6112 5439 2170 115 0 0 chr10 13872609 13872896 -126443869 + AluSx SINE Alu 6 292 -20 912 197 91 72 chr10 13873047 13873367 -126443398 - L1MB5 LINE L1 0 6174 5849 2306 107 0 0 chr10 13874066 13874364 -126442401 - AluSx SINE Alu -14 298 1 1402 128 55 5 chr10 13874618 13874837 -126441928 + MER30 DNA MER1_type 1 230 0 598 248 159 50 chr10 13875024 13875143 -126441622 - L1ME4a LINE L1 -3 6118 6013 1874 163 7 14 chr10 13875143 13875437 -126441328 + AluJb SINE Alu 1 292 -20 598 248 159 50 chr10 13875437 13875821 -126440944 - L1ME4a LINE L1 -108 6013 5560 766 40 30 0 chr10 13876195 13876294 -126440471 + L1PB1 LINE L1 6012 6113 -38 261 0 0 0 chr10 13876305 13876334 -126440431 + (CAAG)n Simple_repeat Simple_repeat 2 30 0 29 47 0 0 chr10 13876620 13876663 -126440102 + AT_rich Low_complexity Low_complexity 1 43 0 1369 205 0 4 chr10 13877616 13877865 -126438900 - AluJb SINE Alu -1 311 64 22 0 0 0 chr10 13878038 13878060 -126438705 + AT_rich Low_complexity Low_complexity 1 22 0 335 186 0 0 chr10 13878735 13878794 -126437971 + MIR3 SINE MIR 114 172 -36 1790 178 3 0 chr10 13878828 13879121 -126437644 + AluJb SINE Alu 6 299 -13 1151 133 6 0 chr10 13879142 13879308 -126437457 + AluSg/x SINE Alu 137 303 -9 24 0 0 0 chr10 13880024 13880048 -126436717 + AT_rich Low_complexity Low_complexity 1 24 0 2233 108 0 0 chr10 13880048 13880336 -126436429 - AluSx SINE Alu -24 288 1 278 223 127 85 chr10 13880366 13880436 -126436329 - MIR SINE MIR -55 207 141 1556 205 19 3 chr10 13880436 13880743 -126436022 - AluJo SINE Alu 0 312 1 278 223 127 85 chr10 13880743 13880836 -126435929 - MIR SINE MIR -121 141 35 2116 104 11 0 chr10 13881441 13881720 -126435045 - AluSc SINE Alu -13 296 15 2181 117 0 0 chr10 13882415 13882715 -126434050 - AluSx SINE Alu -9 303 4 969 203 107 26 chr10 13883023 13883333 -126433432 - MER20B DNA MER1_type 0 783 449 592 156 0 0 chr10 13883393 13883483 -126433282 - FLAM_A SINE Alu -28 114 25 911 135 172 0 chr10 13883514 13883677 -126433088 - AluJo SINE Alu -17 295 105 697 294 85 14 chr10 13883680 13883962 -126432803 - MER20B DNA MER1_type -447 336 35 2015 136 10 7 chr10 13884385 13884693 -126432072 + AluSx SINE Alu 1 309 -3 2008 156 7 0 chr10 13885599 13885907 -126430858 + AluJo SINE Alu 1 310 -2 726 214 129 102 chr10 13886285 13886367 -126430398 - MLT1D LTR MaLR -4 501 423 2195 123 0 0 chr10 13886367 13886667 -126430098 - AluSx SINE Alu -12 300 1 726 214 129 102 chr10 13886667 13887056 -126429709 - MLT1D LTR MaLR -82 423 17 392 246 82 0 chr10 13888032 13888142 -126428623 + L2 LINE L2 3154 3272 0 1263 130 10 43 chr10 13888272 13888480 -126428285 + MER2 DNA MER2_type 6 206 -139 525 71 0 0 chr10 13888506 13888576 -126428189 + (TA)n Simple_repeat Simple_repeat 2 71 0 4185 127 45 4 chr10 13888578 13889261 -126427504 - L1PB4 LINE L1 -7 6149 5439 1945 141 26 26 chr10 13890321 13890627 -126426138 - AluJo SINE Alu -6 306 1 949 239 47 0 chr10 13890643 13890856 -126425909 - MER58A DNA MER1_type 0 224 2 2756 84 11 0 chr10 13891023 13891380 -126425385 + THE1B LTR MaLR 1 361 -3 1921 144 7 16 chr10 13891624 13891930 -126424835 + AluJb SINE Alu 1 303 -9 906 126 0 15 chr10 13891970 13892105 -126424660 + FLAM_C SINE Alu 1 133 0 361 274 19 19 chr10 13893233 13893339 -126423426 + MIR3 SINE MIR 89 194 -14 1660 162 0 11 chr10 13893568 13893840 -126422925 - AluJb SINE Alu -6 306 38 2275 118 0 0 chr10 13894747 13895051 -126421714 - AluSx SINE Alu -8 304 1 1186 117 0 0 chr10 13895760 13895923 -126420842 + AluSx SINE Alu 1 163 -149 952 106 28 0 chr10 13896011 13896152 -126420613 - AluSg/x SINE Alu -17 293 149 2953 198 108 25 chr10 13896162 13896803 -126419962 - L1ME2 LINE L1 -1 6163 5448 3076 115 27 0 chr10 13896803 13897245 -126419520 - LTR22A LTR ERVK -4 454 1 2953 198 108 25 chr10 13897245 13897361 -126419404 - L1ME2 LINE L1 -716 5448 5343 8154 131 80 14 chr10 13897394 13898250 -126418515 + Tigger1 DNA MER2_type 24 1003 -1415 1773 121 0 11 chr10 13898250 13898522 -126418243 - AluSx SINE Alu -14 298 30 8154 131 80 14 chr10 13898522 13899021 -126417744 + Tigger1 DNA MER2_type 1003 1468 -950 1978 134 3 3 chr10 13899022 13899328 -126417437 - AluSx SINE Alu -6 306 1 2712 7 0 0 chr10 13899538 13899839 -126416926 - AluYb8 SINE Alu -17 301 1 24 53 0 0 chr10 13900563 13900601 -126416164 + AT_rich Low_complexity Low_complexity 1 38 0 24 53 0 0 chr10 13900624 13900662 -126416103 + AT_rich Low_complexity Low_complexity 1 38 0 1010 0 0 0 chr10 13900789 13900896 -126415869 + U6 snRNA snRNA 1 107 0 8104 13 0 0 chr10 13900896 13902221 -126414544 + L1HS LINE L1 4831 6155 0 309 89 0 0 chr10 13902221 13902266 -126414499 + (A)n Simple_repeat Simple_repeat 1 45 0 1764 161 3 3 chr10 13902514 13902805 -126413960 - AluJo SINE Alu -21 291 1 981 182 0 0 chr10 13904112 13904288 -126412477 - FRAM SINE Alu 0 176 1 1786 169 10 0 chr10 13904710 13905011 -126411754 + AluJb SINE Alu 1 304 -8 226 208 0 0 chr10 13905012 13905065 -126411700 - L1MC4 LINE L1 -1342 6700 6648 1345 174 95 11 chr10 13906199 13906463 -126410302 - AluJb SINE Alu 0 312 27 1443 136 0 5 chr10 13906463 13906676 -126410089 + AluSx SINE Alu 1 212 -100 1932 206 49 37 chr10 13906808 13907109 -126409656 + L1MB4 LINE L1 5640 5951 -229 1893 126 27 0 chr10 13907109 13907402 -126409363 - AluSx SINE Alu -11 301 1 1932 206 49 37 chr10 13907402 13907590 -126409175 + L1MB4 LINE L1 5951 6135 -45 1737 162 3 10 chr10 13907593 13907889 -126408876 + AluJo SINE Alu 2 295 -17 337 149 0 27 chr10 13907918 13907992 -126408773 + (GAAA)n Simple_repeat Simple_repeat 4 75 0 1171 164 176 0 chr10 13908606 13908850 -126407915 - AluJo SINE Alu -8 304 18 2175 90 3 0 chr10 13908943 13909244 -126407521 + AluSx SINE Alu 1 302 -10 192 291 58 48 chr10 13909626 13909729 -126407036 + MIR SINE MIR 20 123 -139 1369 143 92 31 chr10 13909729 13910023 -126406742 - AluJo SINE Alu 0 312 1 820 168 0 0 chr10 13910043 13910174 -126406591 - FLAM_C SINE Alu -11 132 2 1963 147 10 0 chr10 13910986 13911293 -126405472 + AluSx SINE Alu 1 310 -2 333 0 0 0 chr10 13911294 13911331 -126405434 + (CA)n Simple_repeat Simple_repeat 2 38 0 1735 145 0 7 chr10 13911606 13911875 -126404890 - AluSx SINE Alu -8 304 38 2126 116 0 0 chr10 13912462 13912786 -126403979 - AluSq SINE Alu 0 313 1 1421 133 46 0 chr10 13912859 13913077 -126403688 + AluSg/x SINE Alu 74 301 -9 330 263 132 9 chr10 13913420 13913534 -126403231 - MIR3 SINE MIR -12 196 69 223 322 67 0 chr10 13913619 13913709 -126403056 - L2 LINE L2 -3 3269 3174 917 198 0 0 chr10 13913711 13913878 -126402887 + FRAM SINE Alu 1 166 -10 1934 100 35 7 chr10 13914325 13914615 -126402150 + AluSx SINE Alu 1 298 -14 299 276 75 37 chr10 13914890 13915024 -126401741 - MIR3 SINE MIR -65 143 5 2059 125 7 0 chr10 13915644 13915948 -126400817 + AluSx SINE Alu 1 306 -6 267 278 139 28 chr10 13916541 13916649 -126400116 - MIR SINE MIR -69 139 20 210 182 55 0 chr10 13917535 13917590 -126399175 + T-rich Low_complexity Low_complexity 2 59 0 1990 92 0 21 chr10 13918481 13918798 -126397967 + AluSx SINE Alu 8 318 0 2212 58 41 10 chr10 13918818 13919112 -126397653 + AluY SINE Alu 1 303 -8 734 142 0 37 chr10 13919467 13919601 -126397164 + FLAM_C SINE Alu 2 130 -3 2113 121 0 0 chr10 13919606 13919903 -126396862 + AluSx SINE Alu 1 297 -15 2226 118 0 0 chr10 13919903 13920216 -126396549 + AluSq SINE Alu 1 313 0 225 203 0 68 chr10 13920624 13920683 -126396082 - L2 LINE L2 -13 3259 3205 2044 122 3 3 chr10 13920718 13921021 -126395744 + AluSx SINE Alu 1 303 -9 699 153 25 0 chr10 13921021 13921139 -126395626 - AluSq/x SINE Alu -190 122 2 2128 80 28 0 chr10 13922904 13923192 -126393573 - AluSx SINE Alu -12 300 5 796 143 0 0 chr10 13924139 13924258 -126392507 - L1PB4 LINE L1 0 6156 6038 2119 107 3 3 chr10 13924965 13925265 -126391500 - AluSx SINE Alu -12 300 1 221 297 33 44 chr10 13925661 13925752 -126391013 + MIR SINE MIR 61 150 -112 1817 163 3 0 chr10 13925762 13926057 -126390708 + AluSx SINE Alu 1 296 -16 275 250 0 40 chr10 13926086 13926186 -126390579 + (TATG)n Simple_repeat Simple_repeat 4 99 0 2046 109 0 16 chr10 13926194 13926498 -126390267 - AluSx SINE Alu -13 299 1 2306 37 40 10 chr10 13926503 13926799 -126389966 - AluY SINE Alu -6 305 1 1897 125 0 56 chr10 13926802 13927122 -126389643 - AluSx SINE Alu -10 302 1 761 213 136 14 chr10 13927662 13927949 -126388816 - MER33 DNA MER1_type 0 324 3 1955 174 21 9 chr10 13928855 13929189 -126387576 - MER2 DNA MER2_type -7 338 1 1946 149 13 0 chr10 13931620 13931928 -126384837 - AluSx SINE Alu 0 312 1 2164 109 0 3 chr10 13932797 13933099 -126383666 - AluSx SINE Alu -11 301 1 2185 108 0 0 chr10 13933116 13933413 -126383352 - AluSg SINE Alu -13 297 1 1391 183 3 50 chr10 13934064 13934237 -126382528 - AluJo SINE Alu -10 302 149 2287 83 3 3 chr10 13934237 13934538 -126382227 - AluSq SINE Alu -12 301 1 1391 183 3 50 chr10 13934538 13934681 -126382084 - AluJo SINE Alu -163 149 1 1988 139 3 0 chr10 13935057 13935359 -126381406 + AluSx SINE Alu 1 303 -9 2221 94 3 0 chr10 13935364 13935661 -126381104 + AluSp SINE Alu 1 298 -15 610 243 31 35 chr10 13935661 13935919 -126380846 - L1MB8 LINE L1 -8 6170 5814 2394 70 0 0 chr10 13935936 13936235 -126380530 - AluY SINE Alu -12 299 1 3979 177 52 3 chr10 13936280 13937055 -126379710 - L1MB7 LINE L1 -31 6153 5341 2086 100 14 3 chr10 13937114 13937403 -126379362 + AluSx SINE Alu 1 292 -20 4511 51 2 11 chr10 13937403 13937967 -126378798 + L1PA6 LINE L1 5596 6154 0 740 180 0 8 chr10 13938684 13938806 -126377959 - FLAM_C SINE Alu -12 121 1 255 176 0 39 chr10 13940477 13940528 -126376237 - MER58 DNA MER1_type -25 2395 2347 235 263 0 0 chr10 13941118 13941175 -126375590 - L1MB8 LINE L1 -566 5604 5548 382 236 67 98 chr10 13941390 13941682 -126375083 - L1ME4a LINE L1 -2 6119 5842 2015 120 0 10 chr10 13941682 13941982 -126374783 - AluSx SINE Alu -3 309 13 382 236 67 98 chr10 13941982 13942108 -126374657 - L1ME4a LINE L1 -279 5842 5714 1499 160 71 18 chr10 13942117 13942399 -126374366 + AluJb SINE Alu 1 297 -15 852 202 19 47 chr10 13942401 13942460 -126374305 + L1MC2 LINE L1 4794 4853 -1293 2174 105 0 0 chr10 13942460 13942756 -126374009 - AluSg SINE Alu -14 296 1 852 202 19 47 chr10 13942756 13942909 -126373856 + L1MC2 LINE L1 4853 5000 -1146 254 125 104 0 chr10 13942911 13942959 -126373806 - THE1C LTR MaLR -4 360 308 180 0 0 0 chr10 13942967 13942987 -126373778 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2113 72 61 3 chr10 13943024 13943317 -126373448 - AluSg SINE Alu 0 310 1 1837 142 49 28 chr10 13943317 13943641 -126373124 - THE1C LTR MaLR -42 333 3 1316 213 44 6 chr10 13943643 13944115 -126372650 + L1MC2 LINE L1 4995 5483 -755 1420 99 5 19 chr10 13944116 13944329 -126372436 + AluJb SINE Alu 81 290 -22 2972 153 29 31 chr10 13944333 13944889 -126371876 + L1MC2 LINE L1 5477 6031 -313 325 186 0 0 chr10 13944891 13944961 -126371804 + L1MC2 LINE L1 6275 6344 0 296 151 0 0 chr10 13945010 13945063 -126371702 + L1M4 LINE L1 5758 5810 -364 813 173 67 0 chr10 13945064 13945214 -126371551 + FRAM SINE Alu 11 170 -6 2168 109 0 0 chr10 13945297 13945591 -126371174 + AluSg SINE Alu 1 294 -16 2100 145 0 13 chr10 13946504 13946815 -126369950 + AluSx SINE Alu 1 307 -5 316 245 19 28 chr10 13946879 13946985 -126369780 - LTR16B LTR ERVL -43 421 317 247 273 62 80 chr10 13947362 13947419 -126369346 + MER5B DNA MER1_type 4 60 -118 2184 78 57 3 chr10 13947419 13947702 -126369063 + AluSg SINE Alu 1 298 -12 247 273 62 80 chr10 13947702 13947820 -126368945 + MER5B DNA MER1_type 60 176 -2 313 226 104 35 chr10 13947950 13948065 -126368700 + L2 LINE L2 3191 3313 0 1885 103 60 18 chr10 13948110 13948392 -126368373 - AluSq SINE Alu -19 294 1 542 270 91 25 chr10 13948489 13948730 -126368035 + AluY SINE Alu 3 259 -52 496 132 0 0 chr10 13948872 13948948 -126367817 - AluS SINE Alu -235 77 2 2534 51 7 0 chr10 13949026 13949319 -126367446 + AluY SINE Alu 1 295 -16 1777 171 32 0 chr10 13949727 13950008 -126366757 + AluJo SINE Alu 1 290 -22 21 57 0 0 chr10 13951151 13951186 -126365579 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr10 13951404 13951429 -126365336 + AT_rich Low_complexity Low_complexity 1 25 0 180 0 0 0 chr10 13952092 13952112 -126364653 + (T)n Simple_repeat Simple_repeat 1 20 0 1841 146 14 14 chr10 13952328 13952616 -126364149 + AluSx SINE Alu 1 288 -24 283 313 74 37 chr10 13952659 13952822 -126363943 + MER5A DNA MER1_type 17 185 -4 830 10 10 0 chr10 13952822 13952922 -126363843 + L1PA4 LINE L1 6055 6155 0 2066 112 49 0 chr10 13952986 13953272 -126363493 - AluSx SINE Alu -12 300 1 951 136 23 0 chr10 13953494 13953626 -126363139 + AluJo SINE Alu 1 135 -177 2094 79 13 69 chr10 13954832 13955167 -126361598 + AluSp SINE Alu 7 313 0 2428 97 0 0 chr10 13955264 13955572 -126361193 + AluSg SINE Alu 1 308 -2 2350 49 45 3 chr10 13955575 13955862 -126360903 + AluY SINE Alu 1 299 -12 1805 168 3 3 chr10 13955922 13956232 -126360533 - AluSx SINE Alu -2 310 1 872 165 31 36 chr10 13956257 13956451 -126360314 - MLT1D LTR MaLR -329 176 1 2336 105 0 0 chr10 13956682 13956986 -126359779 - AluSq SINE Alu -9 304 1 2540 77 3 0 chr10 13956995 13957307 -126359458 - AluSp SINE Alu 0 313 1 2501 84 3 0 chr10 13957316 13957627 -126359138 - AluSp SINE Alu -1 312 1 2423 98 0 0 chr10 13957641 13957948 -126358817 - AluSg SINE Alu -2 308 2 2577 111 27 11 chr10 13958091 13958566 -126358199 - MER1A DNA MER1_type -1 528 1 235 296 25 12 chr10 13958802 13958883 -126357882 + MLT1I LTR MaLR 326 407 -2 294 266 161 78 chr10 13958937 13959029 -126357736 + L1ME4a LINE L1 5389 5472 -649 2403 81 3 13 chr10 13959029 13959336 -126357429 + AluSp SINE Alu 1 304 -9 294 266 161 78 chr10 13959336 13959649 -126357116 + L1ME4a LINE L1 5472 5849 -272 2192 122 3 0 chr10 13959649 13959952 -126356813 + AluSx SINE Alu 1 304 -8 294 266 161 78 chr10 13959952 13960061 -126356704 + L1ME4a LINE L1 5849 5947 -174 1661 173 14 14 chr10 13960068 13960357 -126356408 - AluJb SINE Alu -22 290 2 1193 153 6 0 chr10 13960361 13960544 -126356221 - AluSg/x SINE Alu 0 312 129 2523 50 3 7 chr10 13960547 13960848 -126355917 - AluY SINE Alu -1 310 11 384 268 76 89 chr10 13961443 13961638 -126355127 + L1ME4a LINE L1 5900 6093 -28 2508 90 3 0 chr10 13961638 13961950 -126354815 - AluSp SINE Alu 0 313 1 384 268 76 89 chr10 13961950 13961978 -126354787 + L1ME4a LINE L1 6093 6120 -1 * 476 283 68 72 chr10 13961957 13962208 -126354557 + L1ME4a LINE L1 5868 6117 -4 23 78 0 0 chr10 13962217 13962268 -126354497 + AT_rich Low_complexity Low_complexity 1 51 0 1500 160 93 19 chr10 13962268 13962536 -126354229 - AluJo SINE Alu -24 288 1 2247 73 4 0 chr10 13962715 13962988 -126353777 + AluSp SINE Alu 27 300 -13 387 182 0 0 chr10 13963172 13963249 -126353516 + (TG)n Simple_repeat Simple_repeat 1 77 0 1176 155 0 73 chr10 13963710 13963778 -126352987 - AluJo SINE Alu -110 202 131 2189 102 28 0 chr10 13963778 13964061 -126352704 - AluSx SINE Alu -21 291 1 1176 155 0 73 chr10 13964061 13964198 -126352567 - AluJo SINE Alu -181 131 12 186 43 0 0 chr10 13964347 13964370 -126352395 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1942 120 7 7 chr10 13964373 13964648 -126352117 - AluSg SINE Alu -35 275 1 1612 160 32 14 chr10 13964673 13964955 -126351810 - AluJo SINE Alu -25 287 1 1020 178 26 5 chr10 13964966 13965157 -126351608 - AluJb SINE Alu 0 312 118 2097 125 0 46 chr10 13965176 13965503 -126351262 - AluSq SINE Alu -1 312 1 28 29 0 0 chr10 13965838 13965873 -126350892 + AT_rich Low_complexity Low_complexity 1 35 0 2286 89 16 3 chr10 13966099 13966403 -126350362 + AluSx SINE Alu 1 308 -4 2140 68 54 4 chr10 13966608 13966888 -126349877 - AluY SINE Alu -17 294 1 25 0 0 0 chr10 13967742 13967767 -126348998 + AT_rich Low_complexity Low_complexity 1 25 0 739 144 8 0 chr10 13967791 13967916 -126348849 - AluJb SINE Alu 0 312 187 907 206 123 0 chr10 13967916 13968169 -126348596 - LTR2 LTR ERV1 -3 446 163 1686 106 32 39 chr10 13968170 13968493 -126348272 - AluY SINE Alu 0 321 1 2169 83 4 0 chr10 13968500 13968804 -126347961 - AluSg SINE Alu 0 306 2 204 302 94 9 chr10 13968868 13968974 -126347791 + MIR3 SINE MIR 11 125 -83 672 106 53 25 chr10 13969019 13969242 -126347523 + AluJo SINE Alu 4 300 -12 960 155 75 17 chr10 13970344 13970518 -126346247 - AluJ SINE Alu -1 311 128 453 81 0 0 chr10 13970518 13970580 -126346185 + (TTA)n Simple_repeat Simple_repeat 2 63 0 1637 98 91 58 chr10 13970580 13970720 -126346045 - AluSx SINE Alu -27 285 151 594 41 0 0 chr10 13970720 13970793 -126345972 + (TAG)n Simple_repeat Simple_repeat 1 73 0 2263 113 0 0 chr10 13970793 13971084 -126345681 - AluSx SINE Alu -21 291 1 1637 98 91 58 chr10 13971084 13971218 -126345547 - AluSx SINE Alu -160 152 1 532 161 0 0 chr10 13971556 13971643 -126345122 - AluJ SINE Alu -178 134 48 1505 97 5 0 chr10 13971643 13971839 -126344926 + AluSp SINE Alu 104 300 -13 1944 130 0 27 chr10 13972090 13972405 -126344360 + AluSx SINE Alu 1 307 0 255 268 96 64 chr10 13972642 13972799 -126343966 - L1ME4a LINE L1 -1 6120 5959 22 0 0 0 chr10 13972821 13972843 -126343922 + AT_rich Low_complexity Low_complexity 1 22 0 1977 82 26 0 chr10 13972860 13973168 -126343597 - AluY SINE Alu 0 320 6 417 272 174 42 chr10 13973192 13973267 -126343498 - L1ME4a LINE L1 -299 5822 5758 2079 114 52 3 chr10 13973267 13973556 -126343209 - AluSx SINE Alu -9 303 1 417 272 174 42 chr10 13973556 13973672 -126343093 - L1ME4a LINE L1 -363 5758 5598 2159 141 0 0 chr10 13973672 13973984 -126342781 - AluSx SINE Alu 0 312 1 417 272 174 42 chr10 13973984 13974004 -126342761 - L1ME4a LINE L1 -523 5598 5582 474 95 0 0 chr10 13974022 13974085 -126342680 - AluJ/FRAM SINE Alu -17 295 233 832 180 0 0 chr10 13974085 13974213 -126342552 - AluJb SINE Alu -184 128 1 1069 226 16 8 chr10 13974488 13974524 -126342241 + MIR SINE MIR 13 47 -215 1611 145 71 25 chr10 13974524 13974806 -126341959 - AluJo SINE Alu -15 297 3 1069 226 16 8 chr10 13974806 13975017 -126341748 + MIR SINE MIR 47 262 0 536 93 0 0 chr10 13975512 13975587 -126341178 + AluJ/FLAM SINE Alu 2 76 -236 2269 113 0 0 chr10 13975643 13975945 -126340820 - AluSg SINE Alu -8 302 1 27 29 0 0 chr10 13976008 13976042 -126340723 + AT_rich Low_complexity Low_complexity 1 34 0 496 176 12 12 chr10 13976134 13976219 -126340546 + FLAM_C SINE Alu 34 118 -25 2261 110 0 10 chr10 13976350 13976650 -126340115 + AluSx SINE Alu 12 308 -4 1649 194 41 26 chr10 13978054 13978399 -126338366 + MLT1A1 LTR MaLR 4 353 -12 3314 134 39 14 chr10 13978975 13979324 -126337441 + MER1A DNA MER1_type 1 369 -2331 2353 107 3 0 chr10 13979324 13979632 -126337133 - AluSp SINE Alu -4 309 1 3314 134 39 14 chr10 13979632 13979795 -126336970 + MER1A DNA MER1_type 369 526 -1 2317 82 7 7 chr10 13980056 13980349 -126336416 + AluY SINE Alu 3 295 -16 1777 171 32 0 chr10 13980757 13981038 -126335727 + AluJo SINE Alu 1 290 -22 21 57 0 0 chr10 13982181 13982216 -126334549 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr10 13982434 13982459 -126334306 + AT_rich Low_complexity Low_complexity 1 25 0 180 0 0 0 chr10 13983122 13983142 -126333623 + (T)n Simple_repeat Simple_repeat 1 20 0 1870 139 14 14 chr10 13983358 13983646 -126333119 + AluSx SINE Alu 1 288 -24 292 304 71 42 chr10 13983689 13983852 -126332913 + MER5A DNA MER1_type 17 185 0 841 0 20 0 chr10 13983852 13983951 -126332814 + L1PA4 LINE L1 6055 6155 0 2111 110 48 0 chr10 13984014 13984305 -126332460 - AluSx SINE Alu -7 305 1 976 129 23 0 chr10 13984527 13984659 -126332106 + AluJo SINE Alu 1 135 -177 2088 78 13 72 chr10 13985865 13986201 -126330564 + AluSp SINE Alu 7 313 0 2428 97 0 0 chr10 13986298 13986606 -126330159 + AluSg SINE Alu 1 308 -2 2255 87 44 0 chr10 13986609 13986907 -126329858 + AluY SINE Alu 1 311 0 2295 128 0 0 chr10 13987234 13987546 -126329219 - AluSq SINE Alu -1 312 1 1509 184 25 11 chr10 13988418 13988696 -126328069 + AluJo SINE Alu 1 282 -30 192 77 0 0 chr10 13988704 13988730 -126328035 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 2476 89 0 22 chr10 13989068 13989384 -126327381 - AluSp SINE Alu -4 309 1 210 276 126 11 chr10 13989410 13989497 -126327268 + MER5A DNA MER1_type 55 151 -38 492 165 24 0 chr10 13989501 13989586 -126327179 + FLAM_A SINE Alu 1 87 -55 2153 104 0 70 chr10 13989882 13990209 -126326556 - AluSx SINE Alu -8 304 1 2210 119 3 25 chr10 13990226 13990545 -126326220 - AluSx SINE Alu 0 312 1 2628 52 0 0 chr10 13990700 13991007 -126325758 + AluY SINE Alu 1 307 -4 1607 137 36 104 chr10 13991247 13991435 -126325330 - AluJo SINE Alu 0 312 155 223 26 77 0 chr10 13991435 13991474 -126325291 + T-rich Low_complexity Low_complexity 2 43 0 1607 137 36 104 chr10 13991474 13991620 -126325145 - AluJo SINE Alu -157 155 1 1613 150 0 0 chr10 13992064 13992298 -126324467 - AluSx SINE Alu -78 234 1 245 27 54 0 chr10 13992822 13992859 -126323906 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1636 183 4 0 chr10 13992862 13993135 -126323630 - AluSc SINE Alu -35 274 1 1005 218 130 53 chr10 13993183 13993467 -126323298 - L1ME2 LINE L1 -9 6155 5834 2182 99 45 0 chr10 13993467 13993759 -126323006 - AluSc SINE Alu -4 305 1 1005 218 130 53 chr10 13993759 13993851 -126322914 - L1ME2 LINE L1 -330 5834 5750 1664 155 4 15 chr10 13994018 13994282 -126322483 + AluJo SINE Alu 37 297 -15 2404 91 7 0 chr10 13994289 13994596 -126322169 + AluSp SINE Alu 1 309 -4 2152 128 0 0 chr10 13994711 13995016 -126321749 + AluSx SINE Alu 3 307 0 1938 159 3 13 chr10 13995843 13996152 -126320613 - AluJb SINE Alu -6 306 1 203 197 16 16 chr10 13996554 13996615 -126320150 + (AATTG)n Simple_repeat Simple_repeat 5 65 0 2586 50 7 3 chr10 13996764 13997067 -126319698 + AluY SINE Alu 1 304 -7 856 167 0 0 chr10 13997079 13997211 -126319554 + FLAM_C SINE Alu 2 133 0 659 187 0 70 chr10 13997287 13997474 -126319291 + MER96B DNA MER1_type? 1 174 -243 2101 151 0 3 chr10 13997578 13997889 -126318876 - AluSx SINE Alu -2 310 1 1849 173 0 16 chr10 13997920 13998232 -126318533 - AluJo SINE Alu -3 309 3 1615 165 17 37 chr10 13999550 13999847 -126316918 + AluJb SINE Alu 1 291 -21 2349 88 3 0 chr10 13999930 14000226 -126316539 + AluY SINE Alu 1 297 -14 2261 113 3 0 chr10 14000899 14001192 -126315573 + AluSq SINE Alu 1 294 -19 1850 124 37 50 chr10 14001358 14001657 -126315108 + AluSx SINE Alu 1 295 -17 2245 111 3 43 chr10 14002493 14002818 -126313947 + AluSx SINE Alu 1 312 0 2295 114 0 0 chr10 14003520 14003827 -126312938 - AluSx SINE Alu -5 307 1 2364 58 3 49 chr10 14004190 14004233 -126312532 - AluY SINE Alu 0 311 268 207 0 0 0 chr10 14004233 14004256 -126312509 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2364 58 3 49 chr10 14004256 14004538 -126312227 - AluY SINE Alu -43 268 1 695 211 8 8 chr10 14004546 14004679 -126312086 - FLAM_C SINE Alu 0 133 1 306 272 68 0 chr10 14004683 14004786 -126311979 - L1MC/D LINE L1 -860 5473 5364 1041 63 0 0 chr10 14005243 14005370 -126311395 - AluSg/x SINE Alu -6 306 180 2683 39 0 0 chr10 14005650 14005956 -126310809 + AluY SINE Alu 1 306 -5 2304 92 0 0 chr10 14006173 14006485 -126310280 - AluSx SINE Alu 0 312 1 1831 119 35 35 chr10 14006696 14006981 -126309784 - AluJo SINE Alu -17 295 11 752 189 25 6 chr10 14007012 14007171 -126309594 - L1MC3 LINE L1 -923 6862 6701 897 202 24 24 chr10 14007614 14007827 -126308938 - MER58A DNA MER1_type -9 215 3 426 247 119 50 chr10 14008853 14009072 -126307693 - MER112 DNA MER1_type -25 235 2 1941 132 63 16 chr10 14009093 14009352 -126307413 - MLT1B LTR MaLR 0 390 145 2284 130 38 78 chr10 14009352 14009585 -126307180 + MSTA LTR MaLR 1 242 -186 2270 122 0 0 chr10 14009585 14009889 -126306876 - AluSx SINE Alu -8 304 1 2284 130 38 78 chr10 14009889 14010059 -126306706 + MSTA LTR MaLR 242 387 -41 2043 134 3 10 chr10 14010059 14010365 -126306400 - AluSx SINE Alu -8 304 1 2284 130 38 78 chr10 14010365 14010406 -126306359 + MSTA LTR MaLR 387 428 0 1941 132 63 16 chr10 14010406 14010509 -126306256 - MLT1B LTR MaLR -245 145 11 2306 110 0 10 chr10 14010527 14010837 -126305928 - AluSc SINE Alu -2 307 1 420 129 75 32 chr10 14010848 14010941 -126305824 - L1PA16 LINE L1 -4 6162 6066 2998 115 23 6 chr10 14010941 14011420 -126305345 + LTR15 LTR ERV1 1 487 -6 2221 149 0 13 chr10 14011426 14011802 -126304963 - L1PA16 LINE L1 -97 6069 5699 504 329 14 7 chr10 14012353 14012499 -126304266 + MIR SINE MIR 6 152 -110 1734 125 0 4 chr10 14012504 14012744 -126304021 + AluSx SINE Alu 1 239 -73 2281 123 0 3 chr10 14012931 14013240 -126303525 - AluSx SINE Alu -4 308 1 1877 162 27 24 chr10 14013461 14013484 -126303281 + L1MB3 LINE L1 5806 5827 -356 2232 96 3 7 chr10 14013484 14013776 -126302989 + AluSx SINE Alu 11 301 -11 1877 162 27 24 chr10 14013776 14014122 -126302643 + L1MB3 LINE L1 5827 6176 -7 2278 90 0 3 chr10 14014278 14014567 -126302198 - AluY SINE Alu -23 288 1 1722 148 39 11 chr10 14015077 14015360 -126301405 + AluJo SINE Alu 1 291 -21 1913 149 3 3 chr10 14015654 14015968 -126300797 + AluJb SINE Alu 1 314 0 423 286 34 8 chr10 14016527 14016646 -126300119 - L2 LINE L2 -9 3304 3183 2297 114 0 0 chr10 14017075 14017373 -126299392 + AluSx SINE Alu 1 298 -14 341 194 61 10 chr10 14017393 14017491 -126299274 - MLT1L LTR MaLR -8 607 505 432 253 105 102 chr10 14017518 14017870 -126298895 - MLT1L LTR MaLR -221 394 42 2108 104 11 11 chr10 14017950 14018229 -126298536 + AluSg SINE Alu 1 279 -31 1109 66 0 0 chr10 14019316 14019482 -126297283 - AluSc SINE Alu 0 310 145 373 253 65 146 chr10 14019602 14020048 -126296717 - L2 LINE L2 -801 2513 2104 1607 200 14 11 chr10 14020446 14020749 -126296016 + AluJo SINE Alu 2 305 0 1182 221 83 88 chr10 14020801 14020985 -126295780 + MLT1C LTR MaLR 5 188 -279 2314 114 13 0 chr10 14020985 14021292 -126295473 + AluSx SINE Alu 1 311 -1 1182 221 83 88 chr10 14021292 14021564 -126295201 + MLT1C LTR MaLR 188 459 -8 184 319 111 14 chr10 14021593 14021665 -126295100 + MER5A DNA MER1_type 111 189 0 193 364 0 0 chr10 14021961 14022027 -126294738 + L2 LINE L2 750 815 -2499 758 149 0 0 chr10 14022038 14022152 -126294613 - FLAM_A SINE Alu -5 137 24 345 348 106 0 chr10 14022753 14022914 -126293851 - MIR SINE MIR 0 262 85 523 255 48 39 chr10 14022914 14023122 -126293643 - LTR16C LTR ERVL 0 491 282 301 219 7 22 chr10 14023135 14023225 -126293540 + MLT1D LTR MaLR 4 92 -413 862 209 25 0 chr10 14023254 14023417 -126293348 + FRAM SINE Alu 1 166 -10 1162 270 61 3 chr10 14023431 14023750 -126293015 + MLT1D LTR MaLR 113 457 -48 3910 82 3 91 chr10 14023750 14023825 -126292940 - MER41A LTR ERV1 0 554 474 2320 113 0 0 chr10 14023825 14024127 -126292638 + AluSx SINE Alu 1 302 -10 3910 82 3 91 chr10 14024127 14024658 -126292107 - MER41A LTR ERV1 -80 474 1 1162 270 61 3 chr10 14024658 14024701 -126292064 + MLT1D LTR MaLR 457 496 -9 182 349 79 0 chr10 14024996 14025059 -126291706 - MIR SINE MIR -179 83 16 2164 116 0 7 chr10 14025100 14025392 -126291373 + AluSx SINE Alu 1 290 -22 951 171 7 0 chr10 14025392 14025544 -126291221 + AluSq SINE Alu 134 286 -27 2285 91 3 23 chr10 14025592 14025900 -126290865 - AluSg1 SINE Alu -7 302 1 606 101 0 0 chr10 14025900 14025979 -126290786 - AluSq/x SINE Alu -167 145 67 1323 131 0 30 chr10 14025979 14026178 -126290587 - AluSg SINE Alu -113 197 5 712 177 23 0 chr10 14026194 14026324 -126290441 - FLAM_C SINE Alu 0 133 1 340 219 12 0 chr10 14026324 14026406 -126290359 + Charlie5 DNA MER1_type 2503 2585 -27 497 224 8 0 chr10 14027171 14027296 -126289469 + CT-rich Low_complexity Low_complexity 1 126 0 2333 86 7 0 chr10 14027296 14027586 -126289179 - AluSx SINE Alu -20 292 1 725 232 6 18 chr10 14027589 14027753 -126289012 - FRAM SINE Alu -15 161 1 881 197 27 22 chr10 14028006 14028189 -126288576 + MLT1D LTR MaLR 3 186 -319 475 188 0 176 chr10 14028194 14028276 -126288489 + MLT1D LTR MaLR 325 420 -206 2239 109 0 35 chr10 14028276 14028588 -126288177 - AluSx SINE Alu -11 301 1 2224 97 0 16 chr10 14028590 14028927 -126287838 - AluSq SINE Alu 0 313 1 475 188 0 176 chr10 14028927 14029053 -126287712 + MLT1D LTR MaLR 421 624 -2 201 333 143 0 chr10 14029157 14029241 -126287524 + L2 LINE L2 3146 3241 -31 * 249 292 36 36 chr10 14029227 14029364 -126287401 - L2 LINE L2 -1256 2058 1922 2544 74 0 0 chr10 14029365 14029676 -126287089 + AluY SINE Alu 1 311 0 2203 110 0 16 chr10 14030125 14030435 -126286330 - AluSc SINE Alu -2 307 3 856 176 57 13 chr10 14030535 14030694 -126286071 + FRAM SINE Alu 1 166 0 2413 95 0 13 chr10 14030824 14031129 -126285636 - AluSp SINE Alu -12 301 1 211 261 15 31 chr10 14031191 14031256 -126285509 - L2 LINE L2 -11 3261 3198 2581 54 0 0 chr10 14031329 14031625 -126285140 - AluY SINE Alu -13 298 3 1919 164 6 3 chr10 14031975 14032110 -126284655 + AluJb SINE Alu 1 134 -178 2285 112 7 3 chr10 14032110 14032415 -126284350 + AluSq SINE Alu 1 306 -7 1919 164 6 3 chr10 14032415 14032590 -126284175 + AluJb SINE Alu 134 312 0 2462 60 0 0 chr10 14032821 14033121 -126283644 + AluY SINE Alu 1 300 -11 2331 108 0 0 chr10 14033480 14033785 -126282980 + AluSx SINE Alu 1 305 -7 1770 162 3 27 chr10 14034002 14034175 -126282590 - AluJo SINE Alu -22 290 125 2548 48 3 0 chr10 14034175 14034469 -126282296 + AluY SINE Alu 1 295 -16 1770 162 3 27 chr10 14034469 14034592 -126282173 - AluJo SINE Alu -187 125 1 2142 125 0 0 chr10 14034653 14034948 -126281817 - AluSx SINE Alu -2 310 16 2147 124 3 0 chr10 14035565 14035864 -126280901 + AluSx SINE Alu 1 300 -12 197 264 56 14 chr10 14036088 14036160 -126280605 + L3 LINE CR1 1499 1573 -4 191 333 50 50 chr10 14036227 14036407 -126280358 + L2 LINE L2 2511 2690 -624 2288 123 0 0 chr10 14036468 14036770 -126279995 - AluSx SINE Alu -10 302 1 1715 118 0 4 chr10 14036770 14036999 -126279766 - AluSg/x SINE Alu -9 303 76 2443 98 0 0 chr10 14037246 14037553 -126279212 + AluSx SINE Alu 1 307 -5 1128 198 16 37 chr10 14037648 14037890 -126278875 - AluJo SINE Alu -21 291 55 23 0 0 0 chr10 14037894 14037917 -126278848 + AT_rich Low_complexity Low_complexity 1 23 0 1963 137 44 3 chr10 14038106 14038399 -126278366 - AluSx SINE Alu -7 305 1 701 268 105 88 chr10 14038403 14038526 -126278239 + L1ME3 LINE L1 5083 5202 -960 1651 210 3 10 chr10 14038526 14038831 -126277934 + AluJb SINE Alu 1 303 -9 701 268 105 88 chr10 14038831 14039002 -126277763 + L1ME3 LINE L1 5202 5368 -794 2102 131 3 0 chr10 14039002 14039300 -126277465 + AluSp SINE Alu 1 299 -14 701 268 105 88 chr10 14039300 14039644 -126277121 + L1ME3 LINE L1 5368 5704 -458 2420 90 3 0 chr10 14039644 14039954 -126276811 + AluSp SINE Alu 1 311 -2 701 268 105 88 chr10 14039954 14040086 -126276679 + L1ME3 LINE L1 5704 5869 -293 945 135 0 56 chr10 14040086 14040217 -126276548 + L1MB3 LINE L1 6014 6134 -49 2330 95 3 0 chr10 14040217 14040511 -126276254 - AluSp SINE Alu -18 295 1 945 135 0 56 chr10 14040511 14040557 -126276208 + L1MB3 LINE L1 6134 6181 -2 701 268 105 88 chr10 14040557 14040631 -126276134 + L1ME3 LINE L1 5869 5940 -222 2023 126 7 0 chr10 14040777 14041089 -126275676 - AluSx SINE Alu 0 315 2 736 153 46 30 chr10 14041121 14041252 -126275513 + FLAM_C SINE Alu 1 133 0 1613 209 7 3 chr10 14041266 14041572 -126275193 + AluJo SINE Alu 1 307 -5 29 28 0 0 chr10 14042311 14042347 -126274418 + AT_rich Low_complexity Low_complexity 1 36 0 2626 144 19 16 chr10 14042367 14042798 -126273967 - L1PA16 LINE L1 -8 6158 5727 250 128 21 0 chr10 14042799 14042846 -126273919 + Charlie5 DNA MER1_type 2533 2580 -32 2116 107 0 55 chr10 14043110 14043419 -126273346 - AluSg SINE Alu -18 292 1 180 238 143 60 chr10 14043593 14043677 -126273088 - MIR3 SINE MIR -4 204 114 297 282 215 34 chr10 14043694 14043843 -126272922 - MIR SINE MIR -10 252 77 1580 177 9 47 chr10 14044058 14044380 -126272385 + AluJo SINE Alu 2 311 -1 2211 128 0 0 chr10 14044386 14044683 -126272082 + AluSx SINE Alu 1 297 -15 831 207 149 0 chr10 14044725 14044967 -126271798 - MER33 DNA MER1_type -46 278 1 2490 68 0 3 chr10 14045159 14045452 -126271313 + AluSc SINE Alu 2 293 -16 342 73 18 0 chr10 14045894 14045949 -126270816 - AluSp/q SINE Alu -74 229 174 2259 82 3 10 chr10 14046604 14046895 -126269870 - AluSx SINE Alu -2 310 22 2074 153 0 0 chr10 14047273 14047573 -126269192 - AluSx SINE Alu -12 300 1 2329 91 0 3 chr10 14048510 14048817 -126267948 - AluSq SINE Alu -5 308 3 516 275 96 37 chr10 14050200 14050418 -126266347 - MIR SINE MIR -18 244 14 220 167 33 67 chr10 14051031 14051091 -126265674 - L2 LINE L2 0 3313 3256 410 285 228 5 chr10 14051747 14051940 -126264825 - MIR SINE MIR -13 249 14 306 243 68 57 chr10 14052391 14052562 -126264203 - MIR SINE MIR -62 146 23 314 271 181 20 chr10 14052917 14053116 -126263649 - MIR SINE MIR -30 232 2 247 264 192 40 chr10 14053426 14053551 -126263214 + MIR SINE MIR 6 135 -73 2517 45 0 13 chr10 14053674 14053988 -126262777 - AluY SINE Alu -1 310 1 223 331 47 74 chr10 14054141 14054289 -126262476 + L2 LINE L2 3103 3246 -26 349 324 60 0 chr10 14054804 14054986 -126261779 + MER91A DNA MER1_type 3 195 -1 1573 153 33 0 chr10 14055418 14055692 -126261073 - AluJo SINE Alu -13 299 17 205 321 60 30 chr10 14055722 14055890 -126260875 + L2 LINE L2 2776 2948 -366 979 156 39 6 chr10 14055933 14056113 -126260652 + AluJb SINE Alu 115 300 -12 208 235 0 20 chr10 14056389 14056440 -126260325 + L2 LINE L2 3258 3307 -6 1976 129 3 0 chr10 14056440 14056735 -126260030 - AluSx SINE Alu -16 296 1 306 264 124 16 chr10 14056964 14057093 -126259672 + L2 LINE L2 3171 3313 0 180 265 189 30 chr10 14059048 14059180 -126257585 - L2 LINE L2 -208 3064 2912 344 263 11 21 chr10 14059217 14059312 -126257453 - MER5B DNA MER1_type -81 97 4 673 293 207 10 chr10 14059438 14059834 -126256931 - L2 LINE L2 -595 2719 2246 747 230 11 113 chr10 14059947 14060230 -126256535 - MER112 DNA MER1_type -6 254 1 202 135 54 0 chr10 14060578 14060615 -126256150 - L2 LINE L2 -1525 1789 1751 885 159 0 0 chr10 14060895 14061033 -126255732 - FAM SINE Alu -13 172 35 264 248 117 69 chr10 14061336 14061481 -126255284 + MIR SINE MIR 107 258 -4 626 118 49 0 chr10 14061866 14061968 -126254797 + HY1 scRNA scRNA 2 108 -4 2106 111 0 7 chr10 14061985 14062283 -126254482 - AluSx SINE Alu -16 296 1 465 312 163 14 chr10 14062544 14063082 -126253683 - L1MC4a LINE L1 -321 5800 5259 941 226 57 115 chr10 14064104 14064263 -126252502 - MER34B LTR ERV1 -2 563 396 1913 137 3 20 chr10 14064263 14064569 -126252196 + AluSx SINE Alu 1 301 -11 941 226 57 115 chr10 14064569 14065002 -126251763 - MER34B LTR ERV1 -169 396 5 365 297 54 9 chr10 14065044 14065155 -126251610 + L2 LINE L2 3157 3272 0 945 219 143 94 chr10 14065250 14065627 -126251138 - MER110A LTR ERV1 0 491 105 2666 135 36 7 chr10 14065627 14066041 -126250724 + MSTA LTR MaLR 1 426 -2 945 219 143 94 chr10 14066041 14066152 -126250613 - MER110A LTR ERV1 -386 105 1 2307 89 0 6 chr10 14066320 14066633 -126250132 + AluSp SINE Alu 1 311 -2 2723 168 23 2 chr10 14066633 14067110 -126249655 + L1MB4 LINE L1 5656 6142 -38 1615 153 0 18 chr10 14067123 14067397 -126249368 + AluJb SINE Alu 22 290 -22 385 226 21 11 chr10 14067545 14067638 -126249127 - MER45 DNA AcHobo -1453 128 35 1939 126 0 3 chr10 14067776 14068091 -126248674 + AluSx SINE Alu 11 324 0 3953 70 9 23 chr10 14069316 14069433 -126247332 - MER41A LTR ERV1 0 554 437 1709 98 10 101 chr10 14069433 14069767 -126246998 + AluSx SINE Alu 4 309 0 3953 70 9 23 chr10 14069767 14070174 -126246591 - MER41A LTR ERV1 -117 437 35 415 278 167 17 chr10 14070212 14070392 -126246373 - MIR SINE MIR 0 262 56 206 296 42 0 chr10 14070519 14070590 -126246175 - MIR SINE MIR 0 262 189 219 69 0 0 chr10 14070591 14070620 -126246145 + (TA)n Simple_repeat Simple_repeat 2 30 0 1106 121 0 18 chr10 14070621 14070786 -126245979 - AluSg/x SINE Alu -17 295 134 2035 100 10 23 chr10 14070786 14071087 -126245678 - AluSp SINE Alu -15 298 2 244 203 51 0 chr10 14071091 14071150 -126245615 - MIR SINE MIR -102 160 99 967 230 96 9 chr10 14071166 14071396 -126245369 + MIR SINE MIR 13 262 0 227 287 130 35 chr10 14071768 14071883 -126244882 + MIR SINE MIR 15 140 -122 1775 138 10 27 chr10 14071955 14072251 -126244514 + AluJo SINE Alu 11 301 -11 2343 65 3 0 chr10 14073249 14073542 -126243223 + AluY SINE Alu 1 294 -17 449 176 0 0 chr10 14073608 14073682 -126243083 - AluJo SINE Alu -9 303 230 2197 149 7 71 chr10 14073682 14074239 -126242526 - LTR9 LTR ERV1 0 612 1 966 177 62 49 chr10 14074239 14074465 -126242300 - AluJo SINE Alu -79 233 5 459 239 38 31 chr10 14074542 14074701 -126242064 + LTR33A LTR ERVL 362 521 -2 1986 130 0 3 chr10 14074814 14075113 -126241652 - AluSx SINE Alu -13 299 2 2100 122 3 6 chr10 14075347 14075659 -126241106 + AluSx SINE Alu 1 311 -1 2196 107 0 0 chr10 14075946 14076245 -126240520 - AluSx SINE Alu -13 299 1 312 315 37 25 chr10 14076363 14076501 -126240264 - MIR SINE MIR -68 140 34 919 221 93 77 chr10 14076895 14076977 -126239788 + MLT1J2 LTR MaLR 1 80 -370 2329 82 0 13 chr10 14076977 14077292 -126239473 - AluY SINE Alu 0 311 1 919 221 93 77 chr10 14077292 14077443 -126239322 + MLT1J2 LTR MaLR 80 227 -223 1604 177 21 10 chr10 14077443 14077731 -126239034 - AluJo SINE Alu -21 291 1 919 221 93 77 chr10 14077731 14077868 -126238897 + MLT1J2 LTR MaLR 227 383 -67 2996 150 20 76 chr10 14077868 14078516 -126238249 + LTR9 LTR ERV1 1 612 0 919 221 93 77 chr10 14078516 14078583 -126238182 + MLT1J2 LTR MaLR 383 447 -3 195 382 99 0 chr10 14079167 14079298 -126237467 + L2 LINE L2 2896 3039 -233 476 186 0 0 chr10 14079298 14079396 -126237369 + L1ME1 LINE L1 6076 6177 -1 1542 172 0 11 chr10 14079465 14079750 -126237015 - AluJo SINE Alu -22 290 9 2168 162 22 39 chr10 14079751 14080029 -126236736 + L1MC3 LINE L1 6142 6136 -208 1909 162 0 0 chr10 14080029 14080338 -126236427 + AluSx SINE Alu 1 309 -3 2168 162 22 39 chr10 14080338 14080531 -126236234 + L1MC3 LINE L1 6135 6330 -14 2186 55 0 41 chr10 14080532 14080857 -126235908 + AluY SINE Alu 1 313 0 1811 158 14 3 chr10 14080865 14081162 -126235603 + AluSx SINE Alu 1 300 -12 239 286 29 0 chr10 14081292 14081362 -126235403 + L2 LINE L2 3221 3292 -21 467 259 28 0 chr10 14081382 14081490 -126235275 + L2 LINE L2 3186 3296 -17 356 226 95 0 chr10 14081558 14081642 -126235123 + MER45C DNA AcHobo 542 633 -320 415 276 196 14 chr10 14081674 14081888 -126234877 - L2 LINE L2 -861 2453 2201 3523 149 31 0 chr10 14081888 14082470 -126234295 + L1MB3 LINE L1 5542 6141 -42 1800 139 7 17 chr10 14082470 14082764 -126234001 + AluSx SINE Alu 1 291 -21 25 31 0 0 chr10 14082764 14082796 -126233969 + AT_rich Low_complexity Low_complexity 1 32 0 248 40 0 263 chr10 14082796 14082834 -126233931 + L1MB4 LINE L1 6125 6135 -45 2129 101 3 0 chr10 14082834 14083121 -126233644 - AluSp SINE Alu -17 296 9 248 40 0 263 chr10 14083121 14083158 -126233607 + L1MB4 LINE L1 6135 6180 0 734 304 40 13 chr10 14083168 14083392 -126233373 - MIR SINE MIR -13 249 20 1634 134 76 10 chr10 14083473 14083763 -126233002 + AluJo SINE Alu 1 309 -3 1919 156 3 0 chr10 14083771 14084073 -126232692 + AluSx SINE Alu 1 303 -9 1128 157 8 89 chr10 14084546 14084654 -126232111 - MLT1B LTR MaLR -174 216 136 1914 128 10 0 chr10 14084654 14084951 -126231814 - L1PA13 LINE L1 0 6163 5864 1128 157 8 89 chr10 14084951 14085077 -126231688 - MLT1B LTR MaLR -254 136 1 2084 98 10 3 chr10 14085301 14085597 -126231168 - AluSg SINE Alu -8 302 5 328 249 127 55 chr10 14085952 14086075 -126230690 - L1MC/D LINE L1 -2001 5807 5665 1808 147 10 0 chr10 14086075 14086367 -126230398 - AluJb SINE Alu -17 295 1 328 249 127 55 chr10 14086367 14086424 -126230341 - L1MC/D LINE L1 -2143 5665 5614 1450 154 19 67 chr10 14086974 14087087 -126229678 + AluJo SINE Alu 7 124 -188 1851 138 144 46 chr10 14087087 14087132 -126229633 - MSTA LTR MaLR 0 428 389 2380 71 7 0 chr10 14087132 14087441 -126229324 + AluY SINE Alu 1 311 0 1851 138 144 46 chr10 14087441 14087785 -126228980 - MSTA LTR MaLR -39 389 1 1450 154 19 67 chr10 14087785 14087983 -126228782 + AluJo SINE Alu 124 303 -9 925 256 53 71 chr10 14087983 14088417 -126228348 - MER101 LTR ERV1 -38 436 11 251 306 71 53 chr10 14088691 14088861 -126227904 + L3 LINE CR1 517 689 -888 1823 154 3 0 chr10 14088919 14089205 -126227560 + AluSx SINE Alu 1 287 -25 232 272 12 0 chr10 14089225 14089306 -126227459 - L1MC4 LINE L1 -1347 6695 6614 1221 220 32 63 chr10 14089356 14089734 -126227031 - LTR37A LTR ERV1 -42 384 19 550 326 164 25 chr10 14089779 14090217 -126226548 + L3 LINE CR1 791 1289 -288 396 59 0 0 chr10 14090246 14090297 -126226468 + (ATG)n Simple_repeat Simple_repeat 3 53 0 290 282 13 0 chr10 14090328 14090406 -126226359 - MIR SINE MIR -11 251 173 213 286 18 0 chr10 14090459 14090515 -126226250 + MIR3 SINE MIR 148 204 -4 1786 158 0 43 chr10 14091278 14091601 -126225164 - AluJo SINE Alu -2 310 2 2080 124 3 3 chr10 14091816 14092123 -126224642 - AluSx SINE Alu -5 307 1 2083 94 0 27 chr10 14092781 14093079 -126223686 - AluSq SINE Alu -20 293 4 260 83 188 0 chr10 14093122 14093170 -126223595 - AluJ/FLAM SINE Alu -229 73 17 1677 149 0 4 chr10 14093178 14093446 -126223319 + AluJb SINE Alu 46 312 0 2158 93 10 7 chr10 14093859 14094161 -126222604 + AluSp SINE Alu 1 303 -10 2391 52 13 3 chr10 14094790 14095098 -126221667 + AluSx SINE Alu 2 312 0 1945 124 0 0 chr10 14096370 14096681 -126220084 - AluSx SINE Alu 0 313 3 927 171 0 7 chr10 14096683 14096835 -126219930 - AluJo SINE Alu -14 288 138 2218 113 13 3 chr10 14096934 14097243 -126219522 + LTR9 LTR ERV1 1 312 -300 830 157 0 15 chr10 14097266 14097400 -126219365 - AluJo SINE Alu -170 132 1 999 154 0 18 chr10 14097530 14097699 -126219066 + FRAM SINE Alu 1 166 0 1365 181 11 4 chr10 14097700 14097960 -126218805 - AluJb SINE Alu -1 311 50 208 0 0 0 chr10 14098539 14098562 -126218203 + (TTTC)n Simple_repeat Simple_repeat 2 156 0 2028 81 40 0 chr10 14098562 14098834 -126217931 - AluSp SINE Alu -28 285 3 2020 178 18 3 chr10 14098911 14099294 -126217471 - L1MB7 LINE L1 -14 6170 5782 4431 41 13 4 chr10 14099345 14099885 -126216880 - L1PA5 LINE L1 -4 6150 5606 2063 175 9 55 chr10 14099893 14100327 -126216438 - L1MB7 LINE L1 -409 5775 5362 2153 107 0 3 chr10 14100328 14100627 -126216138 - AluSx SINE Alu -14 298 1 1630 130 32 18 chr10 14100899 14101203 -126215562 + AluSx SINE Alu 1 308 0 2031 125 0 10 chr10 14101204 14101515 -126215250 + AluSx SINE Alu 1 308 -4 2216 116 0 0 chr10 14101519 14101830 -126214935 + AluSx SINE Alu 1 311 -1 1845 167 0 3 chr10 14102884 14103195 -126213570 + AluJo SINE Alu 1 310 -2 221 331 108 50 chr10 14103909 14104048 -126212717 + L2 LINE L2 3126 3272 0 323 133 217 0 chr10 14104920 14104980 -126211785 - L1MB4 LINE L1 -77 6103 6031 180 343 94 70 chr10 14105789 14106075 -126210690 + L2 LINE L2 2348 2640 -674 196 250 0 0 chr10 14106726 14106766 -126209999 + L2 LINE L2 3268 3307 -6 2050 219 80 14 chr10 14107214 14107712 -126209053 + MER54A LTR ERVL 371 901 0 1984 112 4 0 chr10 14109047 14109350 -126207415 - AluSx SINE Alu 0 309 6 195 139 0 0 chr10 14110709 14110745 -126206020 + (TA)n Simple_repeat Simple_repeat 2 37 0 1790 155 3 0 chr10 14110926 14111217 -126205548 - AluJb SINE Alu -16 296 5 2186 99 10 6 chr10 14111381 14111693 -126205072 - AluSp SINE Alu 0 313 1 1998 145 0 3 chr10 14114409 14114720 -126202045 + AluSx SINE Alu 1 310 -2 347 258 0 22 chr10 14115389 14115478 -126201287 + MIR SINE MIR 173 259 -3 219 69 0 0 chr10 14115806 14115835 -126200930 + (TAA)n Simple_repeat Simple_repeat 1 29 0 775 267 91 22 chr10 14116114 14116346 -126200419 + MIR SINE MIR 15 262 0 21 0 0 0 chr10 14116382 14116403 -126200362 + AT_rich Low_complexity Low_complexity 1 21 0 2209 93 0 3 chr10 14116597 14116899 -126199866 + AluSc SINE Alu 1 301 -8 28 29 0 0 chr10 14117108 14117143 -126199622 + AT_rich Low_complexity Low_complexity 1 35 0 1941 125 40 0 chr10 14117277 14117573 -126199192 - AluSx SINE Alu -4 308 1 2267 100 6 0 chr10 14117698 14118009 -126198756 + AluSp SINE Alu 1 313 0 703 306 32 19 chr10 14118051 14118267 -126198498 + MIR SINE MIR 40 258 -4 182 240 177 21 chr10 14118281 14118377 -126198388 - L2 LINE L2 -63 3250 3140 825 138 8 8 chr10 14119081 14119211 -126197554 + FLAM_C SINE Alu 2 131 -12 1422 196 26 26 chr10 14119231 14119542 -126197223 + AluJo SINE Alu 2 312 0 223 206 27 41 chr10 14121146 14121219 -126195546 + GA-rich Low_complexity Low_complexity 4 75 0 335 296 98 15 chr10 14121365 14121497 -126195268 - L1ME4a LINE L1 -233 5888 5746 292 327 109 19 chr10 14122921 14123077 -126193688 - MIR3 SINE MIR -9 199 30 25 65 0 0 chr10 14123899 14123945 -126192820 + AT_rich Low_complexity Low_complexity 1 46 0 276 30 0 0 chr10 14125629 14125662 -126191103 + (TTCA)n Simple_repeat Simple_repeat 2 34 0 181 286 98 53 chr10 14125932 14126065 -126190700 + L2 LINE L2 3079 3217 -96 2113 85 37 0 chr10 14126712 14127007 -126189758 + AluSg SINE Alu 1 306 -4 2009 117 0 13 chr10 14128025 14128332 -126188433 + AluSg SINE Alu 1 303 -7 1150 265 34 66 chr10 14128459 14128928 -126187837 - THE1C LTR MaLR 0 375 1 1514 164 35 35 chr10 14128977 14129090 -126187675 + AluJo SINE Alu 1 113 -199 2310 96 0 0 chr10 14129090 14129392 -126187373 - AluSx SINE Alu -10 302 1 1514 164 35 35 chr10 14129392 14129589 -126187176 + AluJo SINE Alu 112 311 -1 2391 87 0 0 chr10 14129883 14130193 -126186572 - AluSg SINE Alu 0 310 1 288 189 268 8 chr10 14130232 14130359 -126186406 + L1ME4a LINE L1 5962 6121 0 2115 78 28 0 chr10 14131009 14131291 -126185474 - AluSp SINE Alu -23 290 1 349 59 78 0 chr10 14131352 14131403 -126185362 - MLT2A2 LTR ERVL 0 453 399 347 277 0 43 chr10 14131405 14131499 -126185266 + L1MC4 LINE L1 6614 6703 -1339 325 359 0 0 chr10 14131421 14131513 -126185252 - L1MC4 LINE L1 -1337 6705 6614 * 607 85 0 0 chr10 14131525 14131607 -126185158 - MLT2A1 LTR ERVL -40 404 323 1083 78 14 0 chr10 14131707 14131848 -126184917 - MLT2A2 LTR ERVL -310 143 1 342 317 127 28 chr10 14131850 14131992 -126184773 - MIR SINE MIR -90 172 17 990 271 36 12 chr10 14132125 14132376 -126184389 - MIR SINE MIR 0 262 6 2216 92 0 0 chr10 14132547 14132841 -126183924 + AluSc SINE Alu 1 294 -15 1916 108 0 0 chr10 14132937 14133197 -126183568 - AluSx SINE Alu -14 298 39 690 243 39 6 chr10 14133431 14133612 -126183153 + MER5A DNA MER1_type 1 187 -2 296 230 133 9 chr10 14134484 14134597 -126182168 + L1ME4a LINE L1 5944 6070 -51 4369 161 19 18 chr10 14134610 14135178 -126181587 - L1MB7 LINE L1 -15 6169 5598 1700 148 49 0 chr10 14135178 14135462 -126181303 - AluJo SINE Alu -14 298 1 4369 161 19 18 chr10 14135462 14135678 -126181087 - L1MB7 LINE L1 -586 5598 5384 3749 143 42 42 chr10 14135697 14136084 -126180681 - L1MA7 LINE L1 0 6291 5902 2283 95 3 0 chr10 14136084 14136390 -126180375 + AluSx SINE Alu 1 307 -5 3749 143 42 42 chr10 14136390 14136718 -126180047 - L1MA7 LINE L1 -388 5903 5576 1006 109 195 226 chr10 14136720 14137207 -126179558 - LTR12 LTR ERV1 -234 480 9 1180 121 6 0 chr10 14137207 14137381 -126179384 - L1MA7 LINE L1 -725 5587 5413 * 6050 155 18 6 chr10 14137378 14139385 -126177380 - L1PB3 LINE L1 -1 6153 4125 346 253 258 20 chr10 14139518 14139716 -126177049 + MIR SINE MIR 6 250 -12 1035 199 28 48 chr10 14140022 14140235 -126176530 - MLT1A2 LTR MaLR 0 374 165 1458 197 7 13 chr10 14140235 14140540 -126176225 - AluSx SINE Alu -9 303 1 1035 199 28 48 chr10 14140540 14140577 -126176188 - MLT1A2 LTR MaLR -209 165 129 824 172 154 0 chr10 14140722 14140891 -126175874 + AluSg/x SINE Alu 93 287 -23 203 285 160 42 chr10 14141259 14141403 -126175362 - MIR SINE MIR -6 256 96 1975 148 0 0 chr10 14142470 14142774 -126173991 + AluSx SINE Alu 1 304 -8 1491 134 21 124 chr10 14142943 14143323 -126173442 + MLT1B LTR MaLR 1 341 -49 386 320 13 7 chr10 14143850 14144003 -126172762 - MIR SINE MIR -38 224 71 868 132 0 0 chr10 14144217 14144346 -126172419 + FLAM_C SINE Alu 5 133 0 449 267 43 25 chr10 14144376 14144537 -126172228 + MER5C DNA MER1_type 51 214 -110 2266 78 0 3 chr10 14144581 14144876 -126171889 + AluSg1 SINE Alu 1 294 -15 214 62 31 0 chr10 14144880 14144912 -126171853 + MER5C DNA MER1_type 292 324 0 580 143 0 0 chr10 14145139 14145230 -126171535 - AluJb SINE Alu -14 298 208 630 241 81 17 chr10 14145242 14145416 -126171349 + MIR SINE MIR 78 262 0 2135 114 0 0 chr10 14145548 14145845 -126170920 - AluSx SINE Alu -13 299 3 3252 134 39 19 chr10 14146106 14146269 -126170496 - MER1A DNA MER1_type -2174 526 368 2199 105 3 0 chr10 14146269 14146574 -126170191 + AluSp SINE Alu 1 306 -7 3252 134 39 19 chr10 14146574 14146926 -126169839 - MER1A DNA MER1_type -2332 368 1 1748 191 41 26 chr10 14147502 14147847 -126168918 - MLT1A1 LTR MaLR -12 353 4 2121 109 3 13 chr10 14149251 14149562 -126167203 - AluSx SINE Alu -4 308 1 25 31 0 0 chr10 14150099 14150131 -126166634 + AT_rich Low_complexity Low_complexity 1 32 0 634 192 56 8 chr10 14150144 14150269 -126166496 + FLAM_C SINE Alu 2 132 -11 529 196 11 0 chr10 14150319 14150411 -126166354 - Tigger7 DNA MER2_type -1 2490 2398 1163 236 78 0 chr10 14150456 14150698 -126166067 - Tigger7 DNA MER2_type -470 263 3 1109 238 81 36 chr10 14150698 14151055 -126165710 - MLT1A2 LTR MaLR 0 374 2 313 51 0 0 chr10 14151144 14151183 -126165582 - U6 snRNA snRNA -68 39 1 496 194 108 0 chr10 14151611 14151704 -126165061 - AluJb SINE Alu -132 180 78 1408 137 5 0 chr10 14151704 14151915 -126164850 - AluSx SINE Alu -100 212 1 1811 153 0 11 chr10 14152079 14152366 -126164399 - AluJb SINE Alu -28 284 1 1738 145 66 7 chr10 14152366 14152670 -126164095 + L1MB3 LINE L1 5817 6138 -45 248 88 0 0 chr10 14152670 14152704 -126164061 + AluSx SINE Alu 1 34 -265 1279 109 62 0 chr10 14152704 14152897 -126163868 - LTR12 LTR ERV1 -133 581 377 359 233 29 19 chr10 14152898 14153001 -126163764 - LTR30 LTR ERV1 -80 642 539 7384 102 34 43 chr10 14153001 14154735 -126162030 - pTR5 LTR ERV1 0 8399 504 321 194 0 0 chr10 14154731 14154793 -126161972 - HERV9 LTR ERV1 -835 7564 7503 * 713 191 101 14 chr10 14154791 14155069 -126161696 - HERV9 LTR ERV1 -5755 1141 840 1880 112 0 14 chr10 14155099 14155375 -126161390 + AluSx SINE Alu 24 295 -17 306 102 0 0 chr10 14155375 14155424 -126161341 + L1MB4 LINE L1 6131 6179 -1 273 282 48 10 chr10 14155525 14155628 -126161137 + Charlie2b DNA MER1_type 577 683 -2099 400 241 260 49 chr10 14155675 14155887 -126160878 + Charlie2 DNA MER1_type 1472 1638 -1224 2275 88 0 0 chr10 14155887 14156184 -126160581 + AluSx SINE Alu 1 297 -15 400 241 260 49 chr10 14156184 14156284 -126160481 + Charlie2 DNA MER1_type 1638 1716 -1146 1587 186 3 10 chr10 14156284 14156580 -126160185 + AluJb SINE Alu 1 294 -18 400 241 260 49 chr10 14156580 14156693 -126160072 + Charlie2 DNA MER1_type 1716 1988 -874 180 112 34 56 chr10 14156693 14156782 -126159983 + (TTATA)n Simple_repeat Simple_repeat 2 88 0 2232 220 69 62 chr10 14156812 14157666 -126159099 + Charlie2 DNA MER1_type 1975 2834 -28 381 188 24 0 chr10 14157744 14157829 -126158936 + L1M4 LINE L1 2693 2779 -3367 205 182 0 23 chr10 14157836 14157880 -126158885 + (ATAAG)n Simple_repeat Simple_repeat 2 44 0 1852 190 37 16 chr10 14157888 14158262 -126158503 + MSTD LTR MaLR 15 396 0 243 169 247 26 chr10 14158267 14158344 -126158421 + L1M4 LINE L1 2784 2877 -3269 286 132 57 0 chr10 14158442 14158495 -126158270 + L1M4 LINE L1 2854 2909 -3237 3067 199 71 161 chr10 14158498 14158631 -126158134 + L1M4 LINE L1 3073 3216 -2930 2144 135 0 0 chr10 14158631 14158943 -126157822 - AluSx SINE Alu 0 312 1 3067 199 71 161 chr10 14158943 14159354 -126157411 + L1M4 LINE L1 3216 3663 -2483 1115 191 9 27 chr10 14159354 14159579 -126157186 + AluJo SINE Alu 1 221 -91 3067 199 71 161 chr10 14159579 14160560 -126156205 + L1M4 LINE L1 3663 4638 -1508 2073 98 3 19 chr10 14160560 14160867 -126155898 + AluSx SINE Alu 1 302 -10 3067 199 71 161 chr10 14160867 14161028 -126155737 + L1M4 LINE L1 4638 4812 -1334 696 243 201 36 chr10 14161224 14161442 -126155323 + L1M4 LINE L1 4834 5015 -1131 1496 168 10 45 chr10 14161442 14161734 -126155031 + AluJb SINE Alu 7 288 -24 696 243 201 36 chr10 14161734 14161993 -126154772 + L1M4 LINE L1 5015 5390 -756 1824 162 0 0 chr10 14162155 14162457 -126154308 - AluSx SINE Alu -4 308 7 233 29 29 0 chr10 14162468 14162502 -126154263 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1353 173 94 0 chr10 14162502 14162643 -126154122 - AluJb SINE Alu -33 279 153 189 0 0 0 chr10 14162643 14162664 -126154101 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 1353 173 94 0 chr10 14162664 14162777 -126153988 - AluJb SINE Alu -159 153 1 348 80 0 0 chr10 14163291 14163341 -126153424 + FLAM_A SINE Alu 84 133 0 1680 141 52 10 chr10 14163377 14163667 -126153098 - AluSx SINE Alu -4 308 7 2129 120 3 0 chr10 14164078 14164378 -126152387 + AluSx SINE Alu 1 301 -11 2303 94 0 0 chr10 14164595 14164902 -126151863 + AluSq SINE Alu 1 307 -6 2265 146 22 0 chr10 14164987 14165343 -126151422 + THE1B LTR MaLR 1 364 0 548 141 38 169 chr10 14165473 14165657 -126151108 + MER103 DNA DNA 6 165 -1 2114 115 3 0 chr10 14166662 14166966 -126149799 + AluSx SINE Alu 1 305 -7 2125 110 0 3 chr10 14167027 14167326 -126149439 - AluSx SINE Alu -14 298 1 381 303 42 8 chr10 14167380 14167499 -126149266 + MER5B DNA MER1_type 1 123 -55 438 212 15 4 chr10 14167502 14167634 -126149131 - AluJ/FRAM SINE Alu 0 312 132 1361 151 7 75 chr10 14167634 14167800 -126148965 - AluJo SINE Alu -11 301 125 2291 72 0 23 chr10 14167800 14168105 -126148660 - AluY SINE Alu -13 298 1 1732 157 13 0 chr10 14168105 14168404 -126148361 - AluJb SINE Alu -9 303 1 1361 151 7 75 chr10 14168404 14168515 -126148250 - AluJo SINE Alu -185 127 42 1979 130 0 0 chr10 14169363 14169687 -126147078 - AluSx SINE Alu 0 324 1 2296 97 0 0 chr10 14170317 14170626 -126146139 + AluSg SINE Alu 1 309 -1 1528 163 6 47 chr10 14170882 14171053 -126145712 - AluJo SINE Alu -5 307 131 474 33 0 0 chr10 14171053 14171113 -126145652 + (TTTA)n Simple_repeat Simple_repeat 2 61 0 2058 113 3 0 chr10 14171113 14171396 -126145369 - AluSp SINE Alu -29 284 1 1528 163 6 47 chr10 14171396 14171543 -126145222 - AluJo SINE Alu -179 133 1 276 122 0 0 chr10 14171753 14171794 -126144971 - MER67D LTR ERV1 -28 486 446 1668 151 3 20 chr10 14171795 14172087 -126144678 + AluJo SINE Alu 1 287 -25 723 142 4 177 chr10 14172106 14172211 -126144554 - MER67D LTR ERV1 -327 187 140 1577 169 0 43 chr10 14172211 14172536 -126144229 - AluJo SINE Alu -1 311 1 723 142 4 177 chr10 14172536 14172656 -126144109 - MER67D LTR ERV1 -374 140 1 240 264 217 19 chr10 14172845 14172951 -126143814 - L2 LINE L2 -8 3264 3138 1964 114 24 0 chr10 14172983 14173273 -126143492 + AluSx SINE Alu 1 297 -15 2980 160 16 25 chr10 14173274 14173522 -126143243 + L1MB8 LINE L1 5575 5824 -354 2225 108 0 0 chr10 14173522 14173827 -126142938 + AluSq SINE Alu 2 306 -7 2980 160 16 25 chr10 14173827 14174134 -126142631 + L1MB8 LINE L1 5824 6125 -53 1230 89 6 0 chr10 14174161 14174329 -126142436 - AluSx SINE Alu -143 169 1 331 134 15 30 chr10 14174329 14174396 -126142369 + L1MB8 LINE L1 6111 6176 -2 547 295 156 9 chr10 14174681 14174905 -126141860 + MIR SINE MIR 1 257 -5 265 322 98 51 chr10 14175010 14175305 -126141460 - L2 LINE L2 -683 2631 2323 2040 96 34 0 chr10 14175308 14175479 -126141286 - AluSg SINE Alu -9 301 114 279 0 0 0 chr10 14175479 14175510 -126141255 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2040 96 34 0 chr10 14175510 14175629 -126141136 - AluSg SINE Alu -196 114 1 2368 65 0 0 chr10 14176054 14176346 -126140419 - AluSp SINE Alu -21 292 1 635 238 26 90 chr10 14177154 14177280 -126139485 - MER5B DNA MER1_type -1 177 65 2389 78 0 0 chr10 14177280 14177589 -126139176 - AluSc SINE Alu 0 309 1 635 238 26 90 chr10 14177589 14177651 -126139114 - MER5B DNA MER1_type -113 65 1 1164 123 0 0 chr10 14180393 14180563 -126136202 - AluSg/x SINE Alu -10 300 131 2119 129 0 0 chr10 14180622 14180932 -126135833 + AluSx SINE Alu 1 310 -2 323 233 14 0 chr10 14182328 14182401 -126134364 - L2 LINE L2 0 3313 3240 230 280 0 0 chr10 14182998 14183048 -126133717 - L2 LINE L2 -1 3271 3222 289 326 31 10 chr10 14183736 14183834 -126132931 + MIR3 SINE MIR 108 207 -1 2069 103 0 0 chr10 14185628 14185946 -126130819 - AluSx SINE Alu 0 318 1 417 214 0 0 chr10 14186052 14186122 -126130643 - MER2 DNA MER2_type -8 337 268 1358 174 66 4 chr10 14186224 14186366 -126130399 - AluJo SINE Alu -38 274 142 225 65 0 0 chr10 14186366 14186397 -126130368 + (ATTG)n Simple_repeat Simple_repeat 4 34 0 1358 174 66 4 chr10 14186397 14186512 -126130253 - AluJo SINE Alu -170 142 1 385 158 0 0 chr10 14186512 14186569 -126130196 - MER2 DNA MER2_type -260 85 29 368 320 47 0 chr10 14186900 14187050 -126129715 - L1ME LINE L1 -452 5669 5513 2157 20 12 0 chr10 14188972 14189223 -126127542 + L1PA4 LINE L1 5901 6154 -1 389 86 17 0 chr10 14189274 14189332 -126127433 + L1M2 LINE L1 5547 5605 -695 493 101 0 119 chr10 14189332 14189425 -126127340 + FLAM_A SINE Alu 35 115 -196 219 36 0 0 chr10 14189425 14189453 -126127312 + (CA)n Simple_repeat Simple_repeat 2 29 0 493 101 0 119 chr10 14189453 14189468 -126127297 + FLAM_A SINE Alu 115 130 -181 540 291 157 5 chr10 14189853 14190076 -126126689 + MIR SINE MIR 6 262 0 357 257 95 40 chr10 14190177 14190325 -126126440 - L1ME4a LINE L1 -4 6117 5962 2117 46 8 0 chr10 14190408 14190669 -126126096 - AluY SINE Alu -11 300 38 2140 24 0 0 chr10 14191617 14191864 -126124901 + AluY SINE Alu 60 306 -5 259 310 23 0 chr10 14193310 14193397 -126123368 + MIR3 SINE MIR 109 197 -11 577 197 49 115 chr10 14193758 14193941 -126122824 - MIR3 SINE MIR -11 197 27 2442 46 0 13 chr10 14194283 14194588 -126122177 + AluY SINE Alu 1 301 -10 363 333 58 0 chr10 14197506 14197644 -126119121 - MIR SINE MIR -44 218 73 651 154 0 10 chr10 14199035 14199139 -126117626 - FLAM_A SINE Alu -12 130 28 371 302 91 89 chr10 14199459 14199820 -126116945 - L2 LINE L2 0 3272 2911 409 317 163 62 chr10 14199838 14200053 -126116712 + L1MEd LINE L1 213 405 -5714 2282 108 0 0 chr10 14200053 14200348 -126116417 + AluSx SINE Alu 1 295 -17 409 317 163 62 chr10 14200348 14200646 -126116119 + L1MEd LINE L1 405 778 -5341 651 267 90 35 chr10 14200714 14200779 -126115986 + L1MEd LINE L1 875 935 -5184 2541 104 28 3 chr10 14200779 14201134 -126115631 - THE1B LTR MaLR 0 364 1 651 267 90 35 chr10 14201134 14201413 -126115352 + L1MEd LINE L1 935 1238 -4881 776 102 94 8 chr10 14201725 14201852 -126114913 + MER85 DNA T2_type 2 139 0 312 215 74 60 chr10 14202106 14202310 -126114455 + L1 LINE L1 4904 5110 -1036 426 340 100 8 chr10 14202435 14202814 -126113951 + L1ME LINE L1 5272 5685 -485 226 259 0 0 chr10 14203550 14203608 -126113157 + L2 LINE L2 3000 3057 -215 2081 127 10 0 chr10 14204884 14205176 -126111589 + AluSx SINE Alu 1 295 -17 198 103 0 0 chr10 14206454 14206483 -126110282 + (TTCC)n Simple_repeat Simple_repeat 4 32 0 200 345 26 17 chr10 14206484 14206600 -126110165 - L2 LINE L2 -18 3295 3179 364 295 16 23 chr10 14206621 14206750 -126110015 - MER94 DNA DNA -5 129 2 2238 102 0 0 chr10 14208095 14208379 -126108386 - AluSc SINE Alu -25 284 1 590 260 73 0 chr10 14208806 14208983 -126107782 - MER91B DNA MER1_type 0 190 1 182 315 0 0 chr10 14209626 14209680 -126107085 + L2 LINE L2 2998 3051 -262 408 240 110 20 chr10 14212700 14212846 -126103919 + MER5A DNA MER1_type 31 189 0 337 294 32 16 chr10 14213586 14213712 -126103053 + MIR SINE MIR 29 156 -106 21 0 0 0 chr10 14214699 14214720 -126102045 + AT_rich Low_complexity Low_complexity 1 21 0 635 223 126 49 chr10 14215680 14216108 -126100657 - LTR48 LTR ERV1 0 787 128 423 287 0 26 chr10 14216081 14216196 -126100569 - MER34 LTR ERV1 -430 112 1 * 23 0 0 0 chr10 14216441 14216464 -126100301 + AT_rich Low_complexity Low_complexity 1 23 0 2149 119 0 7 chr10 14216785 14217087 -126099678 - AluSx SINE Alu -12 300 1 2611 233 69 46 chr10 14217676 14218223 -126098542 - L1ME3 LINE L1 -9 6153 5577 2233 122 0 3 chr10 14218223 14218526 -126098239 - AluSx SINE Alu -10 302 1 2611 233 69 46 chr10 14218526 14218828 -126097937 - L1ME3 LINE L1 -585 5577 5284 2283 95 0 3 chr10 14218828 14219123 -126097642 + AluSq SINE Alu 1 294 -19 225 148 93 0 chr10 14219126 14219180 -126097585 + HSMAR1 DNA Mariner 1 59 -1228 1263 202 53 116 chr10 14219357 14219868 -126096897 - MLT1D LTR MaLR 0 505 27 307 298 43 0 chr10 14220299 14220393 -126096372 + MIR SINE MIR 1 98 -164 332 229 30 69 chr10 14220435 14220566 -126096199 - LTR41 LTR ERVL -49 724 599 294 239 87 0 chr10 14220977 14221069 -126095696 + MIR SINE MIR 114 213 -49 2222 118 3 10 chr10 14221229 14221543 -126095222 + AluSx SINE Alu 1 312 0 634 244 54 32 chr10 14221735 14221956 -126094809 - L2 LINE L2 0 3313 3088 3212 78 93 84 chr10 14221973 14222283 -126094482 + MER41A LTR ERV1 1 320 -234 2636 54 0 13 chr10 14222283 14222597 -126094168 + AluY SINE Alu 1 310 -1 3212 78 93 84 chr10 14222597 14222835 -126093930 + MER41A LTR ERV1 320 554 0 225 108 0 0 chr10 14222856 14222893 -126093872 + (TGG)n Simple_repeat Simple_repeat 2 38 0 1086 288 113 19 chr10 14273033 14273671 -126043094 - L1MEc LINE L1 -4722 1674 977 374 216 0 9 chr10 14273747 14273863 -126042902 + CT-rich Low_complexity Low_complexity 4 118 0 648 286 9 74 chr10 14273866 14274191 -126042574 - L1MEc LINE L1 -6015 381 78 2137 128 7 0 chr10 14274485 14274782 -126041983 + AluSx SINE Alu 1 299 -13 383 312 105 55 chr10 14274977 14275538 -126041227 - L1 LINE L1 -1756 4390 3858 213 94 0 0 chr10 14275538 14275570 -126041195 + (TG)n Simple_repeat Simple_repeat 2 33 0 2011 130 0 0 chr10 14275570 14275854 -126040911 - AluY SINE Alu -27 284 1 383 312 105 55 chr10 14275854 14276059 -126040706 - L1 LINE L1 -2287 3859 3585 6014 177 59 65 chr10 14276082 14276626 -126040139 + Charlie1a DNA MER1_type 49 595 -2166 4958 65 22 0 chr10 14276626 14277225 -126039540 - L1PA7 LINE L1 0 6154 5543 6014 177 59 65 chr10 14277225 14277395 -126039370 + Charlie1a DNA MER1_type 595 764 -1997 2078 114 38 0 chr10 14277395 14277685 -126039080 + AluSx SINE Alu 1 301 -11 6014 177 59 65 chr10 14277685 14278378 -126038387 + Charlie1a DNA MER1_type 764 1449 -6 304 294 78 39 chr10 14278402 14278668 -126038097 - L1 LINE L1 -2573 3573 3292 2344 109 3 0 chr10 14278668 14278979 -126037786 - AluSx SINE Alu 0 312 1 304 294 78 39 chr10 14278979 14279021 -126037744 - L1 LINE L1 -2854 3292 3253 2297 113 0 0 chr10 14279313 14279615 -126037150 - AluSq SINE Alu -9 304 3 764 258 56 30 chr10 14279818 14280085 -126036680 - LTR16A LTR ERVL -58 392 119 341 234 32 32 chr10 14280240 14280334 -126036431 - HsTC2 DNA Tc2 -1804 94 1 1409 189 47 17 chr10 14280560 14280861 -126035904 + MER63C DNA MER1_type 1 310 -620 834 168 114 0 chr10 14281256 14281405 -126035360 - MER5A DNA MER1_type 0 189 24 2046 131 0 0 chr10 14281668 14281950 -126034815 + AluSx SINE Alu 1 282 -30 1452 177 13 55 chr10 14283099 14283409 -126033356 + AluJo SINE Alu 7 303 -9 993 174 40 5 chr10 14283651 14283852 -126032913 + MER63C DNA MER1_type 277 484 -446 1857 123 0 0 chr10 14283854 14284106 -126032659 + AluSx SINE Alu 37 288 -24 21 0 0 0 chr10 14284109 14284130 -126032635 + AT_rich Low_complexity Low_complexity 1 21 0 431 242 32 48 chr10 14284130 14284254 -126032511 + MER20 DNA MER1_type 1 122 -97 519 118 147 10 chr10 14284300 14284402 -126032363 + MER63C DNA MER1_type 480 595 -335 2415 153 53 79 chr10 14284403 14284618 -126032147 + MLT2B2 LTR ERVL 1 220 -295 706 143 76 0 chr10 14284618 14284737 -126032028 - FLAM_C SINE Alu -5 128 1 2415 153 53 79 chr10 14284737 14285050 -126031715 + MLT2B2 LTR ERVL 220 515 0 1328 230 44 0 chr10 14285050 14285361 -126031404 + MER63C DNA MER1_type 592 916 -14 906 254 0 0 chr10 14285747 14285936 -126030829 + MER5A DNA MER1_type 1 189 0 858 243 44 47 chr10 14286529 14286867 -126029898 - L1ME4a LINE L1 -69 6052 5716 879 189 0 0 chr10 14286873 14287026 -126029739 - FRAM SINE Alu -11 165 13 2374 79 23 0 chr10 14287152 14287456 -126029309 - AluSx SINE Alu -1 311 1 2146 117 0 0 chr10 14287925 14288234 -126028531 - AluSx SINE Alu 0 309 1 3514 139 19 3 chr10 14289523 14290113 -126026652 + MER51C LTR ERV1 1 639 -1 2247 70 35 0 chr10 14290333 14290619 -126026146 + AluSx SINE Alu 2 297 -15 1167 126 6 0 chr10 14290626 14290801 -126025964 + FRAM SINE Alu 1 174 -2 888 164 13 19 chr10 14291017 14291176 -126025589 - Charlie1a DNA MER1_type -4 1451 1294 * 2392 184 68 17 chr10 14291160 14291702 -126025063 - Charlie1a DNA MER1_type -629 826 257 698 239 72 11 chr10 14291719 14291899 -126024866 - Charlie1a DNA MER1_type -1249 206 16 23 0 0 0 chr10 14292348 14292371 -126024394 + AT_rich Low_complexity Low_complexity 1 23 0 2272 71 27 17 chr10 14292521 14292650 -126024115 + AluY SINE Alu 1 127 -184 180 0 0 0 chr10 14292650 14292670 -126024095 + (TA)n Simple_repeat Simple_repeat 2 21 0 2272 71 27 17 chr10 14292670 14292836 -126023929 + AluY SINE Alu 127 299 -12 494 246 30 22 chr10 14292916 14293050 -126023715 - MIR SINE MIR -112 150 16 191 291 127 27 chr10 14293225 14293335 -126023430 - MIR SINE MIR -122 140 20 616 266 57 13 chr10 14295073 14295302 -126021463 + L1M4 LINE L1 4745 4983 -1163 338 327 203 22 chr10 14295473 14296168 -126020597 - L2 LINE L2 -1252 2062 1242 4981 180 169 19 chr10 14296225 14297477 -126019288 - Charlie1a DNA MER1_type -8 1447 8 242 288 67 34 chr10 14297724 14297903 -126018862 + MIR SINE MIR 9 191 -51 355 290 99 86 chr10 14298292 14298606 -126018159 - L1MC4 LINE L1 -395 7647 7330 248 125 31 94 chr10 14298628 14298692 -126018073 - L1MC4 LINE L1 -812 7230 7171 544 212 35 0 chr10 14298960 14299073 -126017692 + AluJb SINE Alu 191 307 -5 23 0 0 0 chr10 14299993 14300016 -126016749 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr10 14300767 14300797 -126015968 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr10 14302817 14302850 -126013915 + AT_rich Low_complexity Low_complexity 1 33 0 736 270 72 65 chr10 14302850 14302968 -126013797 - L1ME4a LINE L1 -224 5897 5781 2318 107 0 13 chr10 14302968 14303278 -126013487 - AluSx SINE Alu -6 306 1 736 270 72 65 chr10 14303278 14303574 -126013191 - L1ME4a LINE L1 -340 5781 5480 425 239 145 19 chr10 14303888 14304047 -126012718 + MIR SINE MIR 84 262 0 669 266 57 87 chr10 14304063 14304522 -126012243 - L1MC/D LINE L1 -2032 5776 5332 1877 146 3 0 chr10 14304942 14305229 -126011536 - AluSx SINE Alu -24 288 1 243 0 0 0 chr10 14305492 14305519 -126011246 + (TGG)n Simple_repeat Simple_repeat 2 28 0 231 371 67 9 chr10 14305545 14305650 -126011115 - L3b LINE CR1 -1 1582 1472 966 273 142 33 chr10 14305889 14306405 -126010360 + L3 LINE CR1 997 1568 -9 226 306 71 0 chr10 14306620 14306705 -126010060 - L1ME3A LINE L1 -67 6103 6013 2377 73 7 3 chr10 14307499 14307800 -126008965 + AluSc SINE Alu 1 302 -7 1857 207 162 81 chr10 14308086 14308201 -126008564 - L1ME2 LINE L1 -32 6132 6028 1120 86 40 0 chr10 14308201 14308352 -126008413 + L1PA11 LINE L1 6014 6170 -4 1857 207 162 81 chr10 14308352 14308652 -126008113 - L1ME2 LINE L1 -136 6028 5754 2510 79 0 0 chr10 14308652 14308956 -126007809 + AluSc SINE Alu 1 304 -5 1857 207 162 81 chr10 14308956 14309279 -126007486 - L1ME2 LINE L1 -410 5754 5333 855 211 0 0 chr10 14309280 14309436 -126007329 - AluJb SINE Alu -3 309 154 899 199 24 127 chr10 14309438 14309628 -126007137 - L1ME2 LINE L1 -816 5330 5195 1498 154 28 0 chr10 14309628 14309875 -126006890 - AluJo SINE Alu -25 287 34 899 199 24 127 chr10 14309875 14310055 -126006710 - L1ME2 LINE L1 -951 5195 4998 558 212 171 0 chr10 14310054 14310224 -126006541 - L1ME2 LINE L1 -3399 2747 2549 * 247 209 0 0 chr10 14310224 14310267 -126006498 - MLT1F LTR MaLR -6 549 507 268 274 89 54 chr10 14310313 14310481 -126006284 - MLT1F LTR MaLR -15 527 354 305 400 34 8 chr10 14310989 14311224 -126005541 + MIR SINE MIR 12 252 -10 462 303 117 6 chr10 14311467 14311629 -126005136 - MIR SINE MIR -78 184 5 381 277 86 53 chr10 14312661 14313108 -126003657 - L1ME3A LINE L1 -222 5940 5461 891 171 24 0 chr10 14313431 14313595 -126003170 - L1MB7 LINE L1 0 6184 6017 2265 117 0 0 chr10 14314083 14314381 -126002384 - AluSq SINE Alu -15 298 1 1641 136 81 7 chr10 14314482 14314632 -126002133 - AluSx SINE Alu -20 292 154 224 30 30 0 chr10 14314632 14314665 -126002100 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 1641 136 81 7 chr10 14314665 14314786 -126001979 - AluSx SINE Alu -158 154 1 854 150 133 23 chr10 14314824 14314997 -126001768 - AluJo SINE Alu -4 308 117 553 323 86 33 chr10 14320069 14320465 -125996300 + L3 LINE CR1 398 814 -763 1847 163 40 0 chr10 14320547 14320847 -125995918 + AluJo SINE Alu 1 312 0 409 259 0 0 chr10 14320938 14321019 -125995746 + L2 LINE L2 3233 3313 0 1828 147 58 25 chr10 14321112 14321438 -125995327 - MER1B DNA MER1_type 0 337 1 286 156 31 16 chr10 14321526 14321590 -125995175 - L1MD2 LINE L1 -1 6358 6294 475 216 58 64 chr10 14321956 14322127 -125994638 - Charlie8 DNA MER1_type -2208 209 40 555 242 242 0 chr10 14322340 14322518 -125994247 - MER58A DNA MER1_type 0 224 4 645 200 68 63 chr10 14322671 14322876 -125993889 - L1ME3 LINE L1 -42 6120 5915 942 310 68 2 chr10 14323408 14323805 -125992960 + LTR33 LTR ERVL 20 442 -79 2556 46 0 10 chr10 14325118 14325422 -125991343 + AluY SINE Alu 1 301 -10 394 68 85 0 chr10 14326119 14326178 -125990587 - L1MB2 LINE L1 -7 6164 6101 1697 152 35 10 chr10 14326189 14326479 -125990286 - AluSx SINE Alu -15 297 1 2261 239 119 109 chr10 14326804 14327253 -125989512 + HAL1 LINE L1 520 963 -1544 1722 132 82 0 chr10 14327253 14327533 -125989232 + AluJo SINE Alu 1 303 -9 2261 239 119 109 chr10 14327533 14328983 -125987782 + HAL1 LINE L1 963 2438 -69 1148 260 43 11 chr10 14329035 14329385 -125987380 + L2 LINE L2 2444 2804 -510 608 273 41 23 chr10 14329373 14329593 -125987172 + L2 LINE L2 3084 3307 -6 * 1453 169 113 3 chr10 14330535 14330837 -125985928 + MER2 DNA MER2_type 1 335 -10 912 312 129 23 chr10 14330953 14331559 -125985206 + L3 LINE CR1 433 1102 -475 722 276 35 47 chr10 14331805 14331916 -125984849 - L1ME3A LINE L1 -214 5956 5845 1091 154 19 43 chr10 14331916 14332124 -125984641 - MER105 DNA DNA -1 203 1 722 276 35 47 chr10 14332124 14332353 -125984412 - L1ME3A LINE L1 -325 5845 5620 244 260 130 13 chr10 14332355 14332432 -125984333 + L3 LINE CR1 1092 1177 -400 31 0 0 0 chr10 14332939 14332970 -125983795 + AT_rich Low_complexity Low_complexity 1 31 0 564 275 103 24 chr10 14333540 14333790 -125982975 + MIR SINE MIR 3 261 -1 2395 57 0 0 chr10 14334261 14334540 -125982225 + AluY SINE Alu 1 279 -32 572 237 136 35 chr10 14336851 14337079 -125979686 + MER112 DNA MER1_type 8 258 -2 6285 98 3 6 chr10 14337079 14337951 -125978814 - L1PA11 LINE L1 -2 6172 5303 1943 141 11 0 chr10 14338342 14338626 -125978139 + AluJb SINE Alu 1 287 -25 470 192 128 84 chr10 14338783 14338986 -125977779 - L1ME3A LINE L1 -5 6165 5954 600 145 96 7 chr10 14338987 14339128 -125977637 - L1MB8 LINE L1 0 6184 6025 1532 232 129 46 chr10 14339145 14339817 -125976948 - L1ME3A LINE L1 -216 5946 5206 346 291 47 58 chr10 14340137 14340490 -125976275 + MLT1L LTR MaLR 1 349 -162 195 42 0 0 chr10 14340497 14340521 -125976244 + (T)n Simple_repeat Simple_repeat 1 24 0 2141 209 39 50 chr10 14340564 14341082 -125975683 - MLT2B1 LTR ERVL -8 512 1 1219 248 198 7 chr10 14341914 14342474 -125974291 + LTR50 LTR ERVL 2 668 -127 217 204 51 92 chr10 14343304 14343402 -125973363 + L2 LINE L2 3142 3235 -78 2217 237 53 43 chr10 14343408 14344101 -125972664 - L2 LINE L2 -819 2495 1796 24 32 0 0 chr10 14348381 14348412 -125968353 + AT_rich Low_complexity Low_complexity 1 31 0 444 248 153 19 chr10 14349365 14349522 -125967243 - MER5B DNA MER1_type 0 178 1 238 172 140 75 chr10 14351006 14351099 -125965666 - MER103 DNA DNA -2 164 66 245 231 0 51 chr10 14352447 14352525 -125964240 + (TATG)n Simple_repeat Simple_repeat 2 75 0 255 186 0 0 chr10 14352791 14352834 -125963931 - HERVL LTR ERVL -5195 459 417 287 232 14 0 chr10 14353217 14353286 -125963479 - MER5A DNA MER1_type -87 102 33 1434 113 96 29 chr10 14353515 14353755 -125963010 + AluSx SINE Alu 36 291 -21 777 209 11 39 chr10 14354812 14354994 -125961771 - MER5A DNA MER1_type 0 189 13 418 332 100 26 chr10 14355002 14355231 -125961534 + MIR SINE MIR 9 254 -8 1754 120 76 0 chr10 14355323 14355573 -125961192 + AluSx SINE Alu 21 289 -23 1507 185 67 20 chr10 14357998 14358296 -125958469 + AluJo SINE Alu 1 312 0 2313 119 0 3 chr10 14358732 14359043 -125957722 + AluSx SINE Alu 1 310 -2 186 208 0 0 chr10 14360840 14360888 -125955877 + (CAAGC)n Simple_repeat Simple_repeat 4 51 0 276 228 174 65 chr10 14361087 14361179 -125955586 + L2 LINE L2 3212 3313 0 214 200 0 0 chr10 14362471 14362511 -125954254 + (TTA)n Simple_repeat Simple_repeat 1 40 0 1661 133 82 14 chr10 14363056 14363335 -125953430 + AluJb SINE Alu 1 298 -14 232 344 12 28 chr10 14364171 14364348 -125952417 - MIR SINE MIR -59 149 19 1058 152 1 111 chr10 14364789 14364834 -125951931 - L1MB3 LINE L1 -6 6177 6129 938 219 18 0 chr10 14364834 14365003 -125951762 - FAM SINE Alu -3 172 1 2277 89 38 0 chr10 14365010 14365301 -125951464 - AluSp SINE Alu -11 302 1 1058 152 1 111 chr10 14365301 14365526 -125951239 - L1MB3 LINE L1 -60 6123 5930 2269 123 3 0 chr10 14367030 14367340 -125949425 - AluSx SINE Alu -1 311 1 364 302 47 8 chr10 14369037 14369166 -125947599 - MIR SINE MIR -4 258 125 2146 106 19 32 chr10 14369185 14369497 -125947268 - AluSx SINE Alu -4 308 1 207 0 0 0 chr10 14369900 14369923 -125946842 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 198 103 0 0 chr10 14370678 14370707 -125946058 + (CA)n Simple_repeat Simple_repeat 2 30 0 206 205 48 121 chr10 14370907 14370990 -125945775 - L2 LINE L2 -1 3312 3236 * 244 308 0 13 chr10 14370961 14371039 -125945726 - MIR SINE MIR -169 93 17 2355 98 0 7 chr10 14371257 14371554 -125945211 + AluSx SINE Alu 1 295 -17 277 329 13 0 chr10 14372134 14372213 -125944552 + (TG)n Simple_repeat Simple_repeat 1 80 0 2071 138 27 0 chr10 14373854 14374152 -125942613 - AluJb SINE Alu -6 306 1 2231 102 10 0 chr10 14375490 14375785 -125940980 - AluSx SINE Alu -14 298 1 256 306 170 7 chr10 14375833 14375980 -125940785 - L1ME4a LINE L1 -2 6119 5949 280 342 33 26 chr10 14376151 14376303 -125940462 + L3b LINE CR1 1316 1468 -115 2379 69 6 41 chr10 14376339 14376659 -125940106 - AluSq SINE Alu -4 309 1 377 278 169 12 chr10 14376745 14377000 -125939765 + L1M4 LINE L1 4375 4669 -1477 212 325 146 16 chr10 14377437 14377560 -125939205 - L3b LINE CR1 -320 1263 1125 230 266 17 17 chr10 14378497 14378583 -125938182 + MIR SINE MIR 30 115 -93 1900 142 53 0 chr10 14378869 14379207 -125937558 - L1MA5A LINE L1 -3 6294 5939 2200 115 3 19 chr10 14379226 14379540 -125937225 + AluSg1 SINE Alu 1 309 0 333 0 0 0 chr10 14379558 14379595 -125937170 + (CA)n Simple_repeat Simple_repeat 2 38 0 884 124 23 0 chr10 14380258 14380387 -125936378 + AluJb SINE Alu 1 132 -180 2152 109 3 26 chr10 14380529 14380841 -125935924 + AluSg SINE Alu 1 305 -5 789 148 55 0 chr10 14380849 14380977 -125935788 + AluJo SINE Alu 2 136 -176 208 292 180 19 chr10 14381001 14381162 -125935603 + MIR3 SINE MIR 19 205 -3 291 114 0 0 chr10 14381631 14381675 -125935090 + (TA)n Simple_repeat Simple_repeat 2 45 0 631 316 42 0 chr10 14381788 14382006 -125934759 + MIR SINE MIR 37 262 0 1600 187 3 17 chr10 14382021 14382310 -125934455 + AluJo SINE Alu 1 285 -27 2346 104 0 28 chr10 14382573 14382891 -125933874 - AluSg SINE Alu -1 309 1 180 328 0 0 chr10 14382907 14382965 -125933800 - MIR SINE MIR -170 92 35 1022 70 23 0 chr10 14383139 14383267 -125933498 - AluSg/x SINE Alu -49 263 133 1741 178 0 38 chr10 14383386 14383700 -125933065 + AluJo SINE Alu 1 302 -10 2359 88 14 0 chr10 14383796 14384092 -125932673 - AluSx SINE Alu -12 300 1 853 113 40 0 chr10 14385770 14385894 -125930871 + FRAM SINE Alu 26 154 -22 2035 124 0 17 chr10 14387092 14387390 -125929375 + AluSx SINE Alu 1 293 -19 3624 42 0 0 chr10 14388204 14388638 -125928127 + L1PA4 LINE L1 5719 6152 -3 1765 168 44 13 chr10 14388788 14389086 -125927679 - AluSg SINE Alu -3 307 1 2044 112 4 0 chr10 14389395 14389663 -125927102 - AluSx SINE Alu -37 275 7 459 223 65 14 chr10 14389695 14389834 -125926931 - MER69 DNA AcHobo -1079 147 2 1808 124 20 36 chr10 14390087 14390393 -125926372 - AluJb SINE Alu -11 301 1 189 232 138 80 chr10 14390407 14390545 -125926220 + L2 LINE L2 2339 2484 -830 1462 141 33 0 chr10 14391870 14392083 -125924682 + AluJo SINE Alu 85 304 -8 2208 110 14 0 chr10 14392368 14392660 -125924105 - AluSx SINE Alu -16 296 1 375 273 67 77 chr10 14393638 14393680 -125923085 + MIR SINE MIR 16 57 -205 1953 125 7 30 chr10 14393680 14393977 -125922788 + AluSx SINE Alu 1 290 -22 375 273 67 77 chr10 14393977 14394128 -125922637 + MIR SINE MIR 57 207 -55 2043 122 30 10 chr10 14394372 14394667 -125922098 - AluSx SINE Alu -11 301 1 220 214 0 0 chr10 14395307 14395349 -125921416 + GA-rich Low_complexity Low_complexity 1 42 0 2006 121 0 65 chr10 14396274 14396596 -125920169 - AluSx SINE Alu -11 301 1 902 132 0 22 chr10 14397331 14397467 -125919298 - FLAM_C SINE Alu 0 133 1 225 0 0 0 chr10 14398040 14398065 -125918700 + (T)n Simple_repeat Simple_repeat 1 25 0 1827 148 31 3 chr10 14399293 14399583 -125917182 - AluSx SINE Alu -14 298 1 288 154 0 0 chr10 14399748 14399800 -125916965 + (TG)n Simple_repeat Simple_repeat 1 52 0 681 212 28 22 chr10 14400931 14400989 -125915776 + L1MA4A LINE L1 6124 6180 -123 1913 100 0 0 chr10 14400989 14401255 -125915510 + AluSc SINE Alu 47 312 0 681 212 28 22 chr10 14401255 14401372 -125915393 + L1MA4A LINE L1 6180 6303 0 442 254 7 58 chr10 14401863 14402001 -125914764 + MIR SINE MIR 4 134 -128 1821 150 11 21 chr10 14402015 14402301 -125914464 + AluJo SINE Alu 9 291 -21 294 87 0 0 chr10 14404185 14404231 -125912534 + (CA)n Simple_repeat Simple_repeat 2 47 0 237 65 0 0 chr10 14404709 14404740 -125912025 + (CA)n Simple_repeat Simple_repeat 2 32 0 392 340 0 33 chr10 14406355 14406421 -125910344 + MIR SINE MIR 8 75 -187 2084 129 0 3 chr10 14406421 14406715 -125910050 - AluSx SINE Alu -19 293 1 392 340 0 33 chr10 14406715 14406798 -125909967 + MIR SINE MIR 75 152 -110 418 219 114 0 chr10 14407177 14407282 -125909483 + MER45 DNA AcHobo 1 117 -61 723 108 45 0 chr10 14407344 14407455 -125909310 - L1PB1 LINE L1 -4 6147 6032 336 188 0 0 chr10 14407464 14407528 -125909237 + MER45 DNA AcHobo 1518 1581 0 2060 151 0 3 chr10 14408182 14408486 -125908279 + AluSx SINE Alu 1 303 -9 325 246 85 17 chr10 14409245 14409363 -125907402 - MIR SINE MIR -135 127 2 2161 132 26 0 chr10 14409691 14409995 -125906770 + AluSx SINE Alu 1 312 0 288 345 34 0 chr10 14410099 14410218 -125906547 + MIR3 SINE MIR 32 154 -54 352 300 108 8 chr10 14410660 14410790 -125905975 - MIR3 SINE MIR -47 161 19 346 291 71 57 chr10 14411167 14411308 -125905457 - L1MC4 LINE L1 -1286 6756 6614 * 364 239 33 33 chr10 14411269 14411361 -125905404 + L1MC4 LINE L1 6612 6703 -1339 343 259 158 67 chr10 14411333 14411520 -125905245 + L1MC4 LINE L1 5768 5937 -796 * 2153 106 0 11 chr10 14411520 14411802 -125904963 - AluSx SINE Alu -21 291 13 343 259 158 67 chr10 14411802 14411911 -125904854 + L1MC4 LINE L1 5937 6703 -30 2325 105 0 3 chr10 14412209 14412515 -125904250 + AluSg SINE Alu 1 305 -5 195 226 333 10 chr10 14412620 14412722 -125904043 + MIR SINE MIR 16 150 -58 683 242 172 14 chr10 14412850 14413065 -125903700 + MIR SINE MIR 1 249 -13 2142 122 3 3 chr10 14413084 14413380 -125903385 + AluSx SINE Alu 10 305 -7 192 333 11 33 chr10 14414497 14414587 -125902178 + MIR SINE MIR 42 129 -133 2202 136 0 13 chr10 14414752 14415062 -125901703 - AluSx SINE Alu -6 306 1 180 0 0 0 chr10 14415065 14415085 -125901680 + (T)n Simple_repeat Simple_repeat 1 20 0 295 264 14 14 chr10 14416357 14416429 -125900336 + L2 LINE L2 3201 3272 0 343 236 45 45 chr10 14416469 14416579 -125900186 - MIR SINE MIR -82 126 17 2272 110 0 0 chr10 14417506 14417797 -125898968 - AluSx SINE Alu -21 291 1 497 288 132 47 chr10 14417911 14418230 -125898535 - L2 LINE L2 -1 3312 2967 721 189 7 13 chr10 14418294 14418461 -125898304 + L1MB8 LINE L1 5772 5932 -250 548 130 0 20 chr10 14418569 14418669 -125898096 + L1MB8 LINE L1 5916 6013 -165 2172 119 3 0 chr10 14418772 14419066 -125897699 + AluSq SINE Alu 1 295 -18 1944 145 0 44 chr10 14419800 14420118 -125896647 - AluJo SINE Alu -8 304 1 259 287 0 44 chr10 14420398 14420579 -125896186 + (CTAG)n Simple_repeat Simple_repeat 1 173 0 285 289 0 39 chr10 14420629 14420809 -125895956 + (CTAG)n Simple_repeat Simple_repeat 4 176 0 1283 167 76 4 chr10 14420927 14421191 -125895574 + L1MB2 LINE L1 5889 6171 0 2403 72 0 0 chr10 14421679 14421971 -125894794 + AluY SINE Alu 1 292 -19 196 204 184 0 chr10 14422739 14422788 -125893977 - MIR3 SINE MIR -44 164 107 269 211 0 0 chr10 14423505 14423557 -125893208 - MIR SINE MIR -116 146 95 1413 137 5 0 chr10 14423652 14423885 -125892880 + AluJo SINE Alu 88 312 0 703 186 29 103 chr10 14424085 14424209 -125892556 - MER5A DNA MER1_type 0 189 57 1197 156 183 16 chr10 14424209 14424466 -125892299 - AluJo SINE Alu -2 300 1 2027 129 7 26 chr10 14424471 14424774 -125891991 - AluSx SINE Alu -15 297 1 703 186 29 103 chr10 14424774 14424847 -125891918 - MER5A DNA MER1_type -136 53 1 747 257 80 59 chr10 14424911 14425250 -125891515 + LTR16A LTR ERVL 105 450 0 651 111 0 0 chr10 14425368 14425458 -125891307 + 5S rRNA rRNA 1 90 -31 400 306 89 0 chr10 14425509 14425633 -125891132 + L2 LINE L2 3138 3272 0 2345 100 7 3 chr10 14426143 14426444 -125890321 - AluSx SINE Alu -10 302 1 24 0 0 0 chr10 14426660 14426684 -125890081 + GC_rich Low_complexity Low_complexity 1 24 0 2129 113 0 45 chr10 14428304 14428613 -125888152 + AluSx SINE Alu 1 295 -17 2444 92 0 0 chr10 14428939 14429242 -125887523 + AluSq SINE Alu 1 303 -10 185 286 107 48 chr10 14430469 14430637 -125886128 + MER5B DNA MER1_type 1 178 0 384 242 76 64 chr10 14430960 14431014 -125885751 + MER69A DNA AcHobo 19 71 -2455 1988 88 53 21 chr10 14431014 14431299 -125885466 - AluSq SINE Alu -19 294 1 384 242 76 64 chr10 14431299 14431401 -125885364 + MER69A DNA AcHobo 71 177 0 318 246 169 31 chr10 14431529 14431724 -125885041 + L2 LINE L2 2263 2484 -830 220 224 0 132 chr10 14432346 14432392 -125884373 + L2 LINE L2 3248 3282 -31 2357 102 3 0 chr10 14432392 14432745 -125884020 - AluSx SINE Alu 0 312 1 220 224 0 132 chr10 14432745 14432774 -125883991 + L2 LINE L2 3282 3313 0 2053 115 7 0 chr10 14433444 14433758 -125883007 + AluSx SINE Alu 1 316 0 2200 133 0 0 chr10 14434662 14434962 -125881803 - AluSx SINE Alu -12 300 1 2296 114 0 0 chr10 14436194 14436493 -125880272 - AluSx SINE Alu -13 299 1 2446 88 3 0 chr10 14437390 14437695 -125879070 + AluSx SINE Alu 1 306 -6 2373 116 0 0 chr10 14438396 14438699 -125878066 - AluSx SINE Alu -9 303 1 2114 143 3 3 chr10 14438740 14439048 -125877717 + AluJo SINE Alu 1 308 -4 2066 125 7 0 chr10 14439430 14439727 -125877038 - AluSx SINE Alu -13 299 1 2027 179 0 0 chr10 14440087 14440388 -125876377 - AluSx SINE Alu -11 301 1 191 254 36 0 chr10 14441866 14441921 -125874844 + MIR SINE MIR 78 134 -74 1431 159 19 0 chr10 14442523 14442781 -125873984 + L1MA4 LINE L1 6032 6294 -6 2028 108 21 14 chr10 14443778 14444066 -125872699 - AluSc SINE Alu -7 302 13 2261 76 31 14 chr10 14444822 14445110 -125871655 + AluSx SINE Alu 1 293 -19 216 0 0 0 chr10 14445127 14445151 -125871614 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1309 149 0 21 chr10 14445924 14446159 -125870606 - MER46A DNA MER2_type -6 230 1 1408 142 26 13 chr10 14446221 14446454 -125870311 + MER46A DNA MER2_type 1 236 0 205 370 33 47 chr10 14446508 14446719 -125870046 - L3 LINE CR1 -2 1575 1368 1478 181 140 0 chr10 14447271 14447536 -125869229 + AluJb SINE Alu 1 302 0 982 130 0 22 chr10 14447545 14447729 -125869036 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1959 172 0 22 chr10 14449293 14449612 -125867153 + AluJo SINE Alu 1 312 0 433 232 0 0 chr10 14500109 14500191 -125816574 - AluJ/FLAM SINE Alu -229 83 2 1745 173 25 31 chr10 14500977 14501367 -125815398 + MLT1B LTR MaLR 1 590 -3 1741 150 4 0 chr10 14501394 14501667 -125815098 + AluJb SINE Alu 3 276 -36 1448 287 44 68 chr10 14501842 14502545 -125814220 + MER21B LTR ERV1 24 709 -154 368 282 74 37 chr10 14503031 14503194 -125813571 - MIR SINE MIR -74 188 20 624 135 0 0 chr10 14503321 14503417 -125813348 + FRAM SINE Alu 77 172 -4 544 219 57 0 chr10 14503760 14503883 -125812882 - MER5A DNA MER1_type -59 130 1 298 256 48 48 chr10 14503996 14504060 -125812705 + MLT1L LTR MaLR 250 316 -299 2020 123 0 3 chr10 14504060 14504361 -125812404 - AluSx SINE Alu -12 300 1 298 256 48 48 chr10 14504361 14504421 -125812344 + MLT1L LTR MaLR 315 374 -241 323 237 9 0 chr10 14504644 14504758 -125812007 + (TG)n Simple_repeat Simple_repeat 1 115 0 239 274 137 29 chr10 14506101 14506203 -125810562 - MIR SINE MIR -102 160 48 511 241 4 171 chr10 14506221 14506478 -125810287 - MIR SINE MIR -32 230 17 955 226 28 14 chr10 14506497 14506709 -125810056 + MIR SINE MIR 31 245 -17 462 45 152 0 chr10 14506792 14506858 -125809907 + MADE1 DNA Mariner 1 76 -4 357 131 0 0 chr10 14508054 14508115 -125808650 + (TCCC)n Simple_repeat Simple_repeat 1 61 0 287 254 0 0 chr10 14508891 14508958 -125807807 - MER116 DNA Mariner -5 75 9 375 60 0 0 chr10 14509152 14509202 -125807563 + (TG)n Simple_repeat Simple_repeat 2 51 0 2079 98 10 0 chr10 14510045 14510341 -125806424 - AluSq SINE Alu -14 299 1 243 88 0 0 chr10 14510384 14510418 -125806347 + (A)n Simple_repeat Simple_repeat 1 34 0 2130 113 0 3 chr10 14510612 14510922 -125805843 - AluSx SINE Alu -3 309 1 817 180 0 18 chr10 14511021 14511188 -125805577 - AluJb SINE Alu -13 299 136 449 329 19 6 chr10 14511188 14511346 -125805419 + MIR SINE MIR 101 260 -2 1469 158 64 8 chr10 14511428 14511781 -125804984 - AluJb SINE Alu 0 368 1 1641 137 44 0 chr10 14512744 14513015 -125803750 + AluSx SINE Alu 22 304 -8 526 270 63 31 chr10 14513019 14513241 -125803524 - L1MA9 LINE L1 -76 6236 6008 1730 178 0 6 chr10 14513292 14513606 -125803159 - AluJb SINE Alu 0 312 1 192 117 58 39 chr10 14513607 14513710 -125803055 + (TATAA)n Simple_repeat Simple_repeat 5 109 0 1565 205 18 12 chr10 14514450 14514786 -125801979 + MER58B DNA MER1_type 4 341 0 1142 160 0 31 chr10 14514841 14515066 -125801699 + AluJo SINE Alu 95 312 0 277 246 0 0 chr10 14516610 14516667 -125800098 + L2 LINE L2 3256 3312 -1 1003 190 88 19 chr10 14517279 14517518 -125799247 + AluJb SINE Alu 53 306 0 797 164 7 33 chr10 14517900 14518052 -125798713 - MER3 DNA MER1_type -57 152 5 1847 132 14 10 chr10 14518255 14518550 -125798215 - AluSx SINE Alu -16 296 1 895 128 0 13 chr10 14518551 14518700 -125798065 - L1MA10 LINE L1 -7 6327 6181 330 26 0 0 chr10 14518700 14518739 -125798026 + (TG)n Simple_repeat Simple_repeat 1 39 0 1571 139 60 4 chr10 14518751 14519049 -125797716 + AluJb SINE Alu 1 313 0 314 303 86 46 chr10 14519303 14519478 -125797287 - MIR3 SINE MIR -8 200 19 2373 89 0 6 chr10 14519617 14519932 -125796833 - AluSq SINE Alu 0 313 1 2186 108 0 0 chr10 14521308 14521613 -125795152 + AluSc SINE Alu 1 305 -4 1923 153 0 0 chr10 14521754 14522054 -125794711 - AluSx SINE Alu -12 300 1 204 40 0 0 chr10 14522593 14522618 -125794147 + (TG)n Simple_repeat Simple_repeat 1 25 0 244 258 67 79 chr10 14523221 14523380 -125793385 + MIR SINE MIR 54 210 -52 1460 76 0 10 chr10 14523501 14523699 -125793066 - AluY SINE Alu -8 303 108 345 47 0 0 chr10 14523725 14523768 -125792997 + (TG)n Simple_repeat Simple_repeat 2 44 0 2087 189 59 47 chr10 14523785 14523833 -125792932 + MLT2B1 LTR ERVL 6 52 -468 1902 137 0 3 chr10 14523833 14524125 -125792640 - AluSx SINE Alu -21 291 1 2087 189 59 47 chr10 14524125 14524585 -125792180 + MLT2B1 LTR ERVL 52 520 0 1912 139 3 3 chr10 14524949 14525250 -125791515 - AluJo SINE Alu -2 310 10 1491 153 38 24 chr10 14525601 14525888 -125790877 - AluJo SINE Alu -21 291 1 220 254 0 17 chr10 14526062 14526121 -125790644 - L2 LINE L2 -7 3265 3208 1592 135 50 25 chr10 14526313 14526435 -125790330 + AluSx SINE Alu 1 118 -194 259 44 44 0 chr10 14526435 14526480 -125790285 + (CAAAA)n Simple_repeat Simple_repeat 3 49 0 1592 135 50 25 chr10 14526480 14526639 -125790126 + AluSx SINE Alu 118 289 -23 203 33 115 0 chr10 14526639 14526700 -125790065 + (TA)n Simple_repeat Simple_repeat 1 68 0 55 0 0 0 chr10 14526700 14526755 -125790010 + AT_rich Low_complexity Low_complexity 1 55 0 3007 172 97 27 chr10 14526818 14527174 -125789591 + LTR51 LTR ERV1 1 331 -340 3038 94 22 0 chr10 14527174 14527620 -125789145 + L1MA2 LINE L1 5849 6304 0 3007 172 97 27 chr10 14527620 14527890 -125788875 + LTR51 LTR ERV1 331 671 0 3143 239 120 73 chr10 14529059 14530622 -125786143 + HAL1 LINE L1 636 2295 -212 1729 161 0 26 chr10 14530622 14530926 -125785839 - AluJb SINE Alu -16 296 1 3143 239 120 73 chr10 14530926 14531149 -125785616 + HAL1 LINE L1 2295 2506 -1 330 379 9 13 chr10 14531452 14531679 -125785086 - MIR SINE MIR -24 238 13 221 327 62 18 chr10 14531756 14531869 -125784896 + MIR SINE MIR 98 215 -47 2184 74 0 14 chr10 14532307 14532603 -125784162 - AluSg SINE Alu -5 305 14 183 246 45 82 chr10 14532728 14532838 -125783927 - MIR SINE MIR -46 216 111 291 28 0 0 chr10 14533114 14533150 -125783615 + (TG)n Simple_repeat Simple_repeat 2 37 0 857 58 0 0 chr10 14533380 14533484 -125783281 + L1PA7 LINE L1 6048 6151 -3 189 0 0 0 chr10 14533520 14533541 -125783224 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 1983 138 3 0 chr10 14533552 14533849 -125782916 + AluSg SINE Alu 1 298 -12 226 276 40 13 chr10 14534318 14534394 -125782371 + MIR SINE MIR 154 231 -31 2132 114 0 3 chr10 14534559 14534856 -125781909 + AluSx SINE Alu 1 296 -16 4363 143 17 57 chr10 14535037 14535536 -125781229 + L1MB3 LINE L1 5334 5852 -331 1928 139 13 3 chr10 14535536 14535845 -125780920 + AluJb SINE Alu 1 312 0 4363 143 17 57 chr10 14535845 14535884 -125780881 + L1MB3 LINE L1 5852 5891 -292 2157 133 0 0 chr10 14535884 14536193 -125780572 - AluSx SINE Alu -3 309 1 4363 143 17 57 chr10 14536193 14536479 -125780286 + L1MB3 LINE L1 5891 6125 -58 798 137 0 0 chr10 14536479 14536610 -125780155 + L1PB1 LINE L1 6021 6151 0 4363 143 17 57 chr10 14536610 14536654 -125780111 + L1MB3 LINE L1 6125 6169 -14 216 0 0 0 chr10 14536938 14536962 -125779803 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2166 106 0 0 chr10 14536964 14537257 -125779508 - AluSc SINE Alu -16 293 1 21 36 0 0 chr10 14537301 14537329 -125779436 + AT_rich Low_complexity Low_complexity 1 28 0 1426 182 76 3 chr10 14537892 14538183 -125778582 - AluJb SINE Alu 0 312 1 231 220 180 20 chr10 14538747 14538847 -125777918 + MIR SINE MIR 35 150 -58 2125 96 0 7 chr10 14539221 14539524 -125777241 + AluSx SINE Alu 1 301 -11 33 25 0 0 chr10 14540096 14540136 -125776629 + AT_rich Low_complexity Low_complexity 1 40 0 5645 56 0 0 chr10 14540143 14540821 -125775944 - L1PA5 LINE L1 -7 6147 5470 2182 86 0 3 chr10 14540848 14541138 -125775627 + AluSq SINE Alu 12 300 -13 188 215 31 0 chr10 14541185 14541250 -125775515 + GA-rich Low_complexity Low_complexity 3 69 0 1587 184 11 0 chr10 14541970 14542253 -125774512 - AluJb SINE Alu -6 306 21 371 101 0 101 chr10 14542307 14542376 -125774389 + AluSx SINE Alu 1 62 -241 186 43 0 0 chr10 14542382 14542405 -125774360 + (A)n Simple_repeat Simple_repeat 1 23 0 2037 180 122 4 chr10 14542619 14543086 -125773679 + MER74A LTR ERVL 34 555 -3 288 0 0 0 chr10 14544073 14544105 -125772660 + (CA)n Simple_repeat Simple_repeat 1 32 0 329 0 24 0 chr10 14544284 14544325 -125772440 + (TG)n Simple_repeat Simple_repeat 1 42 0 208 327 67 29 chr10 14545617 14545721 -125771044 - L2 LINE L2 -1839 1475 1368 292 265 29 0 chr10 14546131 14546199 -125770566 + L2 LINE L2 3200 3269 -44 1890 143 31 0 chr10 14547683 14547977 -125768788 - AluSx SINE Alu -9 303 1 1523 140 4 0 chr10 14548664 14548907 -125767858 + AluSx SINE Alu 39 282 -30 459 213 15 22 chr10 14548907 14549043 -125767722 + CT-rich Low_complexity Low_complexity 1 135 0 414 250 0 0 chr10 14549053 14549221 -125767544 + C-rich Low_complexity Low_complexity 1 168 0 1938 110 0 0 chr10 14549726 14549999 -125766766 + AluSx SINE Alu 39 311 -1 339 343 48 0 chr10 14550003 14550149 -125766616 - L2 LINE L2 -838 2476 2324 2259 90 3 6 chr10 14552286 14552598 -125764167 - AluSx SINE Alu -1 311 1 387 173 4 2 chr10 14552910 14552998 -125763767 + AluJ/FLAM SINE Alu 2 58 -244 232 216 0 108 chr10 14552998 14553100 -125763665 - L2 LINE L2 -300 2972 2882 2091 105 14 3 chr10 14553707 14554003 -125762762 + AluSx SINE Alu 1 299 -13 2327 54 3 32 chr10 14554005 14554321 -125762444 + AluY SINE Alu 1 307 -4 1442 213 47 0 chr10 14554321 14554621 -125762144 - L1M4 LINE L1 -379 5799 5486 1806 137 7 7 chr10 14554980 14555279 -125761486 + AluSx SINE Alu 1 299 -13 189 0 0 0 chr10 14555916 14555937 -125760828 + (T)n Simple_repeat Simple_repeat 1 21 0 1973 252 50 23 chr10 14556268 14556791 -125759974 - MLT1H LTR MaLR 0 549 13 428 311 64 14 chr10 14557375 14557597 -125759168 + L1ME2 LINE L1 5478 5717 -445 523 254 81 133 chr10 14557599 14557868 -125758897 - L2 LINE L2 0 3313 3070 667 200 56 22 chr10 14557868 14558048 -125758717 + MER53 DNA DNA 1 186 -3 523 254 81 133 chr10 14558048 14558184 -125758581 - L2 LINE L2 -243 3070 2929 329 278 102 16 chr10 14558218 14558405 -125758360 + L1ME2 LINE L1 5746 5948 -216 2349 72 3 0 chr10 14558635 14558941 -125757824 - AluSq SINE Alu -6 307 1 380 329 63 0 chr10 14559370 14559528 -125757237 + MIR SINE MIR 68 235 -27 192 77 0 0 chr10 14559530 14559556 -125757209 + (TTA)n Simple_repeat Simple_repeat 1 26 0 378 266 186 49 chr10 14560277 14560503 -125756262 - MIR SINE MIR 0 262 6 396 287 78 65 chr10 14561026 14561226 -125755539 + MIR SINE MIR 26 231 -31 201 74 0 0 chr10 14561226 14561253 -125755512 + (TTA)n Simple_repeat Simple_repeat 3 29 0 396 287 78 65 chr10 14561253 14561282 -125755483 + MIR SINE MIR 231 258 -4 2067 103 3 3 chr10 14561804 14562095 -125754670 - AluSx SINE Alu -2 310 20 232 332 67 14 chr10 14562408 14562631 -125754134 - L2 LINE L2 -213 3059 2825 785 172 12 37 chr10 14562931 14563094 -125753671 - AluJo/FRAM SINE Alu -19 293 135 1492 148 109 28 chr10 14563094 14563378 -125753387 - AluJo SINE Alu -5 307 1 921 250 73 82 chr10 14563378 14563802 -125752963 - L2 LINE L2 -10 3303 2884 393 251 27 153 chr10 14563823 14563957 -125752808 + MER5A DNA MER1_type 14 121 -68 2105 119 3 3 chr10 14563957 14564267 -125752498 - AluSx SINE Alu -2 310 1 393 251 27 153 chr10 14564267 14564315 -125752450 + MER5A DNA MER1_type 121 173 -16 330 45 0 0 chr10 14564324 14564368 -125752397 + (TC)n Simple_repeat Simple_repeat 1 44 0 1742 150 27 23 chr10 14564514 14564814 -125751951 + AluJo SINE Alu 6 306 -6 2049 104 7 26 chr10 14565196 14565504 -125751261 - AluSx SINE Alu -10 302 1 22 0 0 0 chr10 14565563 14565585 -125751180 + AT_rich Low_complexity Low_complexity 1 22 0 803 251 38 30 chr10 14565658 14565893 -125750872 + MIR SINE MIR 16 252 -10 2134 96 0 0 chr10 14565900 14566210 -125750555 - AluSx SINE Alu 0 310 1 853 168 6 30 chr10 14567145 14567312 -125749453 - FRAM SINE Alu -13 163 1 394 306 75 15 chr10 14567314 14567448 -125749317 + MIR SINE MIR 102 243 -19 302 273 91 27 chr10 14567452 14567562 -125749203 + MIR SINE MIR 143 259 -3 1522 145 87 11 chr10 14567648 14567924 -125748841 - AluJo SINE Alu -15 297 1 2034 121 24 0 chr10 14568437 14568734 -125748031 - AluSx SINE Alu -8 304 1 2038 108 3 3 chr10 14568869 14569165 -125747600 - AluSx SINE Alu -11 301 6 229 143 0 0 chr10 14569742 14569777 -125746988 - MER85 DNA T2_type 0 139 105 299 71 0 0 chr10 14569861 14569903 -125746862 - MER85 DNA T2_type -96 43 2 7122 60 23 0 chr10 14570126 14571206 -125745559 - L1PA8 LINE L1 0 6172 5092 2671 100 8 8 chr10 14571353 14571732 -125745033 + L1PA13 LINE L1 5765 6143 -20 1217 164 14 24 chr10 14571774 14571987 -125744778 - MIR SINE MIR -35 227 17 288 297 57 62 chr10 14572004 14572213 -125744552 - L2 LINE L2 -170 3143 2936 208 261 0 0 chr10 14572252 14572298 -125744467 - L2 LINE L2 -557 2757 2712 280 301 86 73 chr10 14572377 14572911 -125743854 - L2 LINE L2 -431 2883 2343 1959 104 42 0 chr10 14573020 14573307 -125743458 + AluSx SINE Alu 1 299 -13 217 246 0 49 chr10 14573405 14573466 -125743299 + L3b LINE CR1 1306 1363 -220 1305 154 0 0 chr10 14573575 14573776 -125742989 + AluJb SINE Alu 82 282 -30 180 0 0 0 chr10 14573779 14573799 -125742966 + (CAAA)n Simple_repeat Simple_repeat 3 22 0 181 79 0 53 chr10 14574832 14574870 -125741895 + (CGG)n Simple_repeat Simple_repeat 2 37 0 28 68 0 0 chr10 14574931 14574975 -125741790 + GC_rich Low_complexity Low_complexity 1 44 0 194 62 31 0 chr10 14575041 14575073 -125741692 + (CGGGGG)n Simple_repeat Simple_repeat 5 37 0 1923 92 61 10 chr10 14579132 14579425 -125737340 - AluSc SINE Alu -1 308 1 976 191 0 6 chr10 14580070 14580253 -125736512 + FRAM SINE Alu 1 174 -2 201 74 0 0 chr10 14580894 14580921 -125735844 + (GA)n Simple_repeat Simple_repeat 2 28 0 346 226 48 55 chr10 14581390 14581524 -125735241 + MIR SINE MIR 1 139 -69 782 145 0 0 chr10 14581595 14581712 -125735053 - FLAM_C SINE Alu -18 125 9 891 80 0 0 chr10 14582581 14582719 -125734046 + (TG)n Simple_repeat Simple_repeat 2 139 0 2095 121 0 7 chr10 14583308 14583614 -125733151 - AluSx SINE Alu -7 305 2 2045 125 7 0 chr10 14583719 14584024 -125732741 + AluJb SINE Alu 1 307 -5 441 0 0 0 chr10 14584782 14584831 -125731934 + (CA)n Simple_repeat Simple_repeat 1 49 0 180 77 0 0 chr10 14585375 14585401 -125731364 + (TC)n Simple_repeat Simple_repeat 2 27 0 1608 155 4 22 chr10 14585408 14585686 -125731079 - AluJo SINE Alu -39 273 1 857 288 168 37 chr10 14585794 14586784 -125729981 - L2 LINE L2 0 3313 2193 736 180 8 0 chr10 14586877 14587005 -125729760 + FLAM_C SINE Alu 2 130 -3 624 148 13 26 chr10 14587005 14587160 -125729605 + GA-rich Low_complexity Low_complexity 1 153 0 1061 171 0 75 chr10 14587282 14587534 -125729231 - AluJo SINE Alu -6 306 74 806 109 0 8 chr10 14587554 14587673 -125729092 - AluJo SINE Alu -162 150 33 455 250 0 0 chr10 14587683 14587799 -125728966 - L1MA10 LINE L1 -4 6330 6215 372 164 0 0 chr10 14587967 14588034 -125728731 + CT-rich Low_complexity Low_complexity 2 68 0 2195 106 0 0 chr10 14588048 14588351 -125728414 - AluSx SINE Alu -9 303 1 189 0 0 0 chr10 14588578 14588599 -125728166 + (T)n Simple_repeat Simple_repeat 1 21 0 37 62 0 0 chr10 14589967 14590032 -125726733 + AT_rich Low_complexity Low_complexity 1 65 0 518 301 137 5 chr10 14590648 14590867 -125725898 - L3 LINE CR1 -25 1552 1305 441 243 28 0 chr10 14590934 14591041 -125725724 - MER94 DNA DNA -24 110 1 462 328 11 17 chr10 14591102 14591276 -125725489 - L3 LINE CR1 -407 1170 998 259 247 14 14 chr10 14591338 14591411 -125725354 - L3 LINE CR1 -852 725 653 307 267 43 9 chr10 14592028 14592144 -125724621 - L1ME LINE L1 -411 5710 5591 2136 115 3 0 chr10 14592553 14592857 -125723908 - AluSx SINE Alu -7 305 1 1544 167 21 0 chr10 14592981 14593262 -125723503 + AluSq SINE Alu 6 292 -21 1610 152 45 0 chr10 14593610 14593910 -125722855 - AluSq SINE Alu 0 314 3 186 143 0 0 chr10 14594020 14594055 -125722710 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 514 270 23 46 chr10 14594747 14594921 -125721844 - MIR SINE MIR -79 183 14 180 0 0 0 chr10 14596116 14596136 -125720629 + (GGGGA)n Simple_repeat Simple_repeat 3 22 0 187 268 18 104 chr10 14596324 14596488 -125720277 - L2 LINE L2 -328 2985 2836 192 143 0 125 chr10 14597643 14597699 -125719066 - MER5A DNA MER1_type -35 154 106 1652 155 30 17 chr10 14597999 14598295 -125718470 - AluJb SINE Alu -12 300 1 49 18 0 0 chr10 14598555 14598611 -125718154 + AT_rich Low_complexity Low_complexity 1 56 0 851 145 0 0 chr10 14598718 14598842 -125717923 - FLAM_A SINE Alu -8 125 2 528 80 90 17 chr10 14598861 14599154 -125717611 + (TTATA)n Simple_repeat Simple_repeat 1 314 0 197 90 64 39 chr10 14599176 14599254 -125717511 + (TTATA)n Simple_repeat Simple_repeat 5 84 0 1730 178 0 6 chr10 14599255 14599569 -125717196 + AluJb SINE Alu 1 312 0 615 235 63 26 chr10 14599634 14599842 -125716923 + L1MA9 LINE L1 6024 6236 -63 1805 114 44 0 chr10 14599846 14600117 -125716648 - AluSx SINE Alu -8 304 22 1470 158 64 8 chr10 14601080 14601433 -125715332 + AluJb SINE Alu 1 368 0 449 329 19 6 chr10 14601515 14601673 -125715092 - MIR SINE MIR -2 260 101 817 180 0 18 chr10 14601673 14601840 -125714925 + AluJb SINE Alu 136 299 -13 2130 113 0 3 chr10 14601939 14602249 -125714516 + AluSx SINE Alu 1 309 -3 243 88 0 0 chr10 14602443 14602477 -125714288 + (T)n Simple_repeat Simple_repeat 1 34 0 2105 114 3 0 chr10 14602520 14602827 -125713938 + AluSq SINE Alu 1 308 -5 1931 134 0 26 chr10 14603203 14603516 -125713249 - AluSx SINE Alu -7 305 1 195 146 0 0 chr10 14603851 14603892 -125712873 + (A)n Simple_repeat Simple_repeat 1 41 0 407 140 0 0 chr10 14605581 14605638 -125711127 - MLT1B LTR MaLR -332 58 2 836 165 0 0 chr10 14605894 14606027 -125710738 + AluSg/x SINE Alu 158 290 -22 924 238 40 8 chr10 14606359 14606607 -125710158 - MER63 DNA MER1_type -1 1060 805 444 101 72 0 chr10 14606758 14606827 -125709938 - MER63 DNA MER1_type -136 700 1 226 353 25 34 chr10 14606833 14606952 -125709813 - MIR SINE MIR -59 149 32 712 221 36 72 chr10 14607250 14607417 -125709348 + L2 LINE L2 3126 3287 -26 2300 66 3 23 chr10 14607417 14607719 -125709046 - AluSp SINE Alu -17 296 1 712 221 36 72 chr10 14607719 14607746 -125709019 + L2 LINE L2 3287 3313 0 378 298 140 11 chr10 14608158 14608336 -125708429 - L3b LINE CR1 -87 1496 1296 2058 109 0 3 chr10 14608348 14608663 -125708102 - AluSp SINE Alu 0 314 1 263 294 74 74 chr10 14609290 14609711 -125707054 - L1ME4a LINE L1 -59 6062 5642 475 310 77 56 chr10 14610147 14610470 -125706295 + L2 LINE L2 2943 3272 0 396 0 0 0 chr10 14610553 14610597 -125706168 + (CA)n Simple_repeat Simple_repeat 2 45 0 222 274 10 20 chr10 14610606 14610708 -125706057 + (CATATA)n Simple_repeat Simple_repeat 4 104 0 435 19 0 0 chr10 14610749 14610801 -125705964 + (TAGA)n Simple_repeat Simple_repeat 4 55 0 183 100 0 0 chr10 14610822 14610852 -125705913 + (TA)n Simple_repeat Simple_repeat 2 31 0 2006 105 0 57 chr10 14612083 14612398 -125704367 + AluSx SINE Alu 1 297 -15 434 304 89 37 chr10 14612593 14612784 -125703981 + L3b LINE CR1 1310 1510 -73 1975 125 13 7 chr10 14612961 14613265 -125703500 - AluSx SINE Alu -6 306 1 1268 181 38 48 chr10 14613270 14613563 -125703202 - AluJo SINE Alu -22 290 1 672 133 68 236 chr10 14613983 14614294 -125702471 + MER33 DNA MER1_type 14 255 -2330 1909 107 70 0 chr10 14614294 14614565 -125702200 + AluSc SINE Alu 3 292 -17 672 133 68 236 chr10 14614565 14614622 -125702143 + MER33 DNA MER1_type 255 320 -4 3191 138 47 21 chr10 14614633 14614895 -125701870 - MER1A DNA MER1_type -2173 527 273 2224 110 0 0 chr10 14614895 14615195 -125701570 - AluSc SINE Alu -9 300 1 3191 138 47 21 chr10 14615195 14615446 -125701319 - MER1A DNA MER1_type -2427 273 1 2071 126 3 0 chr10 14615572 14615882 -125700883 - AluSx SINE Alu -1 311 1 443 313 159 11 chr10 14615899 14616075 -125700690 - MIR SINE MIR -56 206 5 716 120 0 68 chr10 14616592 14616709 -125700056 - AluSg/x SINE Alu -16 294 186 1471 119 5 0 chr10 14616709 14616927 -125699838 - AluSq SINE Alu -94 219 1 204 40 0 0 chr10 14617466 14617491 -125699274 + (TG)n Simple_repeat Simple_repeat 1 25 0 219 250 78 63 chr10 14618095 14618231 -125698534 + MIR SINE MIR 54 191 -62 21 0 0 0 chr10 14618341 14618362 -125698403 + AT_rich Low_complexity Low_complexity 1 21 0 339 343 48 0 chr10 14618364 14618510 -125698255 - L2 LINE L2 -838 2476 2324 2259 90 3 6 chr10 14620646 14620958 -125695807 - AluSx SINE Alu -1 311 1 387 173 4 2 chr10 14621270 14621358 -125695407 + AluJ/FLAM SINE Alu 2 58 -244 232 216 0 108 chr10 14621358 14621460 -125695305 - L2 LINE L2 -300 2972 2882 2091 105 14 3 chr10 14622067 14622363 -125694402 + AluSx SINE Alu 1 299 -13 2128 85 0 29 chr10 14622365 14622672 -125694093 + AluY SINE Alu 1 298 -13 186 294 0 20 chr10 14622745 14622796 -125693969 + MIR SINE MIR 23 72 -136 310 305 30 41 chr10 14622821 14623018 -125693747 + L2 LINE L2 2910 3104 -168 1817 145 3 3 chr10 14623099 14623395 -125693370 - AluSx SINE Alu -15 297 2 245 321 71 57 chr10 14623595 14623735 -125693030 + L2 LINE L2 2923 3064 -208 2221 97 0 13 chr10 14623836 14624146 -125692619 + AluSg SINE Alu 1 306 -4 228 243 0 54 chr10 14624190 14624264 -125692501 + L2 LINE L2 3244 3313 0 2016 118 0 0 chr10 14624905 14625185 -125691580 + AluSc SINE Alu 1 280 -29 1617 153 0 71 chr10 14626404 14626712 -125690053 - AluJo SINE Alu -26 286 1 1808 120 0 8 chr10 14626837 14627104 -125689661 + AluSx SINE Alu 34 298 -14 1593 180 3 38 chr10 14627260 14627577 -125689188 - AluJo SINE Alu -6 306 1 2060 108 0 49 chr10 14628472 14628797 -125687968 - AluSc SINE Alu 0 309 1 881 180 12 18 chr10 14629079 14629246 -125687519 - FRAM SINE Alu 0 166 1 1568 151 10 49 chr10 14629636 14629795 -125686970 - AluJo SINE Alu -20 292 149 1815 148 7 0 chr10 14629795 14630085 -125686680 - AluSx SINE Alu -9 303 12 1568 151 10 49 chr10 14630085 14630229 -125686536 - AluJo SINE Alu -163 149 1 653 219 123 0 chr10 14630572 14630727 -125686038 + MER5B DNA MER1_type 1 174 -4 2155 102 0 0 chr10 14630751 14631046 -125685719 - AluY SINE Alu -16 295 1 877 184 66 5 chr10 14631228 14631440 -125685325 + L1MD3 LINE L1 7756 7980 -15 2112 130 0 0 chr10 14631737 14632038 -125684727 - AluSx SINE Alu -11 301 1 279 79 0 0 chr10 14632910 14632948 -125683817 + (CACG)n Simple_repeat Simple_repeat 2 39 0 278 253 379 0 chr10 14633701 14633796 -125682969 - MER94 DNA DNA -1 133 3 1769 132 30 20 chr10 14635076 14635372 -125681393 - AluSx SINE Alu -13 299 1 1022 94 0 0 chr10 14635388 14635526 -125681239 + AluSg/x SINE Alu 158 295 -15 360 185 12 12 chr10 14635825 14635906 -125680859 - AluSg/x SINE Alu -3 299 219 372 175 0 0 chr10 14636089 14636152 -125680613 + Alu SINE Alu 235 297 -3 2224 88 7 0 chr10 14636448 14636742 -125680023 - AluSc SINE Alu -13 296 1 1072 232 120 4 chr10 14636775 14637025 -125679740 + MLT1A2 LTR MaLR 1 279 -95 260 300 31 46 chr10 14637033 14637163 -125679602 - L2 LINE L2 -5 3308 3181 686 228 65 122 chr10 14637681 14637726 -125679039 - MARNA DNA Mariner -17 569 523 1991 110 21 0 chr10 14637726 14638016 -125678749 + AluSx SINE Alu 1 296 -16 686 228 65 122 chr10 14638016 14638030 -125678735 - MARNA DNA Mariner -63 523 510 1924 148 61 111 chr10 14638030 14638470 -125678295 - MER47B DNA MER2_type 0 418 1 686 228 65 122 chr10 14638470 14638778 -125677987 - MARNA DNA Mariner -76 510 222 1766 142 56 23 chr10 14638872 14639174 -125677591 + AluJo SINE Alu 1 312 0 350 173 0 12 chr10 14639181 14639262 -125677503 + GA-rich Low_complexity Low_complexity 1 80 0 184 278 278 9 chr10 14639640 14639755 -125677010 - MIR SINE MIR -60 202 57 1817 186 62 5 chr10 14639755 14640143 -125676622 + L1MB4 LINE L1 5771 6180 0 633 209 171 37 chr10 14640872 14641059 -125675706 + MLT1I LTR MaLR 198 409 0 2415 101 55 0 chr10 14642035 14642380 -125674385 + THE1B LTR MaLR 1 364 0 364 231 77 0 chr10 14642605 14642683 -125674082 + MIR3 SINE MIR 74 157 -51 1346 182 17 34 chr10 14642737 14643033 -125673732 - AluJo SINE Alu -21 291 1 676 222 7 46 chr10 14643189 14643342 -125673423 + MIR SINE MIR 82 228 -34 2092 99 0 7 chr10 14643407 14643719 -125673046 + AluSx SINE Alu 1 310 0 185 292 42 42 chr10 14643923 14644019 -125672746 + L2 LINE L2 2995 3090 -223 499 214 156 74 chr10 14644116 14644263 -125672502 + MLT1D LTR MaLR 1 135 -332 1612 125 0 74 chr10 14644263 14644560 -125672205 - AluSx SINE Alu -10 302 28 499 214 156 74 chr10 14644560 14644813 -125671952 + MLT1D LTR MaLR 135 467 0 346 273 55 38 chr10 14646151 14646312 -125670453 - MIR SINE MIR -55 207 47 286 238 0 24 chr10 14646596 14646680 -125670085 - L1MC4 LINE L1 -1325 6717 6636 * 936 196 29 0 chr10 14646667 14646871 -125669894 - L1MA8 LINE L1 -27 6264 6055 236 375 48 10 chr10 14646974 14647078 -125669687 + L2 LINE L2 3150 3257 -15 603 214 101 59 chr10 14648676 14648759 -125668006 - MER2 DNA MER2_type 0 345 267 1814 134 9 53 chr10 14648759 14649079 -125667686 + AluSg SINE Alu 1 306 -4 603 214 101 59 chr10 14649079 14649174 -125667591 - MER2 DNA MER2_type -78 267 152 2146 111 0 7 chr10 14649174 14649480 -125667285 + AluSx SINE Alu 1 304 -8 603 214 101 59 chr10 14649480 14649538 -125667227 - MER2 DNA MER2_type -193 152 98 2910 174 26 26 chr10 14649563 14649892 -125666873 - MER44D DNA MER2_type -1892 595 209 1920 117 101 38 chr10 14649892 14650208 -125666557 + MER1B DNA MER1_type 2 337 0 2910 174 26 26 chr10 14650208 14650418 -125666347 - MER44D DNA MER2_type -2277 210 1 421 238 0 0 chr10 14650419 14650503 -125666262 - MER2 DNA MER2_type -261 84 1 230 340 124 0 chr10 14650636 14650733 -125666032 + MIR SINE MIR 148 256 -6 3782 130 51 19 chr10 14652730 14653083 -125663682 - L1PB4 LINE L1 0 6156 5773 2277 97 3 0 chr10 14653083 14653394 -125663371 - AluSp SINE Alu -1 312 1 3782 130 51 19 chr10 14653394 14653671 -125663094 - L1PB4 LINE L1 -383 5773 5506 1545 141 130 11 chr10 14653805 14654074 -125662691 + AluJo SINE Alu 1 301 -1 2037 130 0 0 chr10 14655352 14655652 -125661113 - AluSx SINE Alu -12 300 1 854 211 0 6 chr10 14655860 14656031 -125660734 + FRAM SINE Alu 1 166 -10 247 380 70 22 chr10 14656043 14656272 -125660493 + MIR SINE MIR 17 256 -6 407 237 44 0 chr10 14656990 14657104 -125659661 - MER5B DNA MER1_type -1 177 59 614 191 0 0 chr10 14657110 14657215 -125659550 - AluJo SINE Alu -6 306 202 1109 145 0 0 chr10 14657302 14657468 -125659297 - AluJo SINE Alu -112 200 35 197 270 96 70 chr10 14657612 14657700 -125659065 - L2 LINE L2 -8 3264 3171 2265 103 58 11 chr10 14657700 14658048 -125658717 - THE1B LTR MaLR 0 364 1 197 270 96 70 chr10 14658048 14658074 -125658691 - L2 LINE L2 -101 3171 3147 402 262 206 7 chr10 14658141 14658282 -125658483 + MIR SINE MIR 69 237 -25 351 273 263 25 chr10 14658259 14658457 -125658308 - MIR SINE MIR 0 262 18 * 2014 133 0 19 chr10 14658538 14658854 -125657911 + AluSx SINE Alu 1 310 -2 200 59 29 0 chr10 14658871 14658905 -125657860 + (CAAAA)n Simple_repeat Simple_repeat 4 38 0 550 276 74 41 chr10 14659685 14659928 -125656837 + MIR SINE MIR 8 258 -4 3204 116 49 18 chr10 14659970 14660479 -125656286 + MER1A DNA MER1_type 3 527 0 266 196 0 0 chr10 14660492 14660543 -125656222 - L2 LINE L2 0 3313 3263 2069 116 0 0 chr10 14660568 14660860 -125655905 - AluSx SINE Alu -20 292 1 204 253 88 66 chr10 14661047 14661138 -125655627 - MIR SINE MIR -77 131 39 2480 56 0 0 chr10 14661315 14661619 -125655146 - AluY SINE Alu -7 304 1 1494 165 10 28 chr10 14662665 14662956 -125653809 - AluJo SINE Alu -26 286 1 2126 107 0 0 chr10 14663063 14663352 -125653413 - AluSx SINE Alu -20 292 4 1678 172 3 31 chr10 14663549 14663868 -125652897 - AluJo SINE Alu -2 310 1 1764 174 25 29 chr10 14664653 14665043 -125651722 + MLT1B LTR MaLR 1 591 -2 2142 110 3 0 chr10 14665081 14665380 -125651385 + AluSq SINE Alu 13 312 -1 1741 150 4 0 chr10 14665391 14665664 -125651101 + AluJb SINE Alu 3 276 -36 1482 284 44 70 chr10 14665839 14666543 -125650222 + MER21B LTR ERV1 24 709 -154 374 284 74 31 chr10 14667031 14667193 -125649572 - MIR SINE MIR -74 188 20 624 135 0 0 chr10 14667320 14667416 -125649349 + FRAM SINE Alu 77 172 -4 544 219 57 0 chr10 14667759 14667882 -125648883 - MER5A DNA MER1_type -59 130 1 298 256 48 48 chr10 14667995 14668059 -125648706 + MLT1L LTR MaLR 250 316 -299 2020 123 0 3 chr10 14668059 14668360 -125648405 - AluSx SINE Alu -12 300 1 298 256 48 48 chr10 14668360 14668420 -125648345 + MLT1L LTR MaLR 315 374 -241 323 237 9 0 chr10 14668643 14668757 -125648008 + (TG)n Simple_repeat Simple_repeat 1 115 0 239 274 137 29 chr10 14670100 14670202 -125646563 - MIR SINE MIR -102 160 48 511 241 4 171 chr10 14670220 14670477 -125646288 - MIR SINE MIR -32 230 17 955 226 28 14 chr10 14670496 14670708 -125646057 + MIR SINE MIR 31 245 -17 462 45 152 0 chr10 14670791 14670857 -125645908 + MADE1 DNA Mariner 1 76 -4 357 131 0 0 chr10 14672053 14672114 -125644651 + (TCCC)n Simple_repeat Simple_repeat 1 61 0 287 254 0 0 chr10 14672890 14672957 -125643808 - MER116 DNA Mariner -5 75 9 375 60 0 0 chr10 14673151 14673201 -125643564 + (TG)n Simple_repeat Simple_repeat 2 51 0 2169 84 10 0 chr10 14674044 14674340 -125642425 - AluSp SINE Alu -14 299 1 1591 92 5 0 chr10 14674449 14674667 -125642098 + AluSq SINE Alu 1 219 -94 716 120 0 68 chr10 14674667 14674784 -125641981 + AluSg/x SINE Alu 186 294 -16 443 313 159 11 chr10 14675301 14675477 -125641288 + MIR SINE MIR 5 206 -56 2071 126 3 0 chr10 14675494 14675804 -125640961 + AluSx SINE Alu 1 311 -1 3191 138 47 21 chr10 14675929 14676180 -125640585 + MER1A DNA MER1_type 1 244 -2456 2224 110 0 0 chr10 14676180 14676480 -125640285 + AluSc SINE Alu 1 300 -9 3191 138 47 21 chr10 14676480 14676742 -125640023 + MER1A DNA MER1_type 244 527 0 546 173 84 128 chr10 14676753 14676810 -125639955 - Charlie5 DNA MER1_type -4 2581 2523 1909 107 70 0 chr10 14676810 14677081 -125639684 - AluSc SINE Alu -17 292 3 546 173 84 128 chr10 14677081 14677272 -125639493 - Charlie5 DNA MER1_type -62 2523 2344 239 386 0 8 chr10 14677408 14677535 -125639230 + CT-rich Low_complexity Low_complexity 3 128 0 825 166 7 0 chr10 14677811 14677956 -125638809 + AluSp/q SINE Alu 154 299 -14 1712 187 30 16 chr10 14677956 14678320 -125638445 + L1MB8 LINE L1 5797 6165 -13 269 174 0 0 chr10 14678478 14678524 -125638241 - L2 LINE L2 -1 3271 3226 394 235 25 105 chr10 14678626 14678788 -125637977 - L2 LINE L2 -58 3255 3107 331 318 210 0 chr10 14679020 14679196 -125637569 + L3 LINE CR1 367 579 -998 246 269 295 29 chr10 14679356 14679668 -125637097 + L3 LINE CR1 593 987 -590 1099 164 14 5 chr10 14679683 14679891 -125636874 + AluJo SINE Alu 84 293 -19 511 323 62 60 chr10 14679976 14680257 -125636508 + L3 LINE CR1 1067 1351 -226 2441 51 7 0 chr10 14680257 14680553 -125636212 + AluY SINE Alu 1 298 -13 511 323 62 60 chr10 14680553 14680769 -125635996 + L3 LINE CR1 1351 1565 -12 463 264 161 1 chr10 14681344 14681530 -125635235 - MIR SINE MIR -12 250 37 2008 128 0 23 chr10 14682151 14682456 -125634309 - AluSx SINE Alu -14 298 1 247 346 54 15 chr10 14682653 14682783 -125633982 + MIR3 SINE MIR 36 170 -38 648 246 119 25 chr10 14682926 14683162 -125633603 + L2 LINE L2 3056 3313 0 228 67 0 0 chr10 14683288 14683318 -125633447 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 2199 99 3 0 chr10 14683400 14683694 -125633071 - AluSx SINE Alu -17 295 1 254 217 12 12 chr10 14684375 14684458 -125632307 + (TTAAA)n Simple_repeat Simple_repeat 3 85 0 1871 134 3 0 chr10 14684522 14684843 -125631922 + AluSx SINE Alu 1 322 0 286 295 0 0 chr10 14685754 14685832 -125630933 - MIR SINE MIR -5 257 180 979 174 61 33 chr10 14685851 14686064 -125630701 - MLT1A1 LTR MaLR 0 374 156 390 129 0 0 chr10 14686069 14686131 -125630634 + (TC)n Simple_repeat Simple_repeat 1 62 0 1657 180 14 0 chr10 14686131 14686425 -125630340 - AluJb SINE Alu -12 300 3 1010 125 6 25 chr10 14686426 14686586 -125630179 - MLT1A1 LTR MaLR -208 157 1 308 257 108 0 chr10 14686609 14686683 -125630082 - MIR SINE MIR -180 82 1 1792 182 24 25 chr10 14686742 14687113 -125629652 + MLT1A2 LTR MaLR 1 546 -3 231 296 67 21 chr10 14687233 14687351 -125629414 - MIR3 SINE MIR -48 160 86 332 311 20 66 chr10 14688456 14688607 -125628158 - L3 LINE CR1 -591 986 843 857 292 132 36 chr10 14689058 14689666 -125627099 + L2 LINE L2 2654 3311 -2 2113 73 0 4 chr10 14689667 14689942 -125626823 + AluSg SINE Alu 29 302 -8 2246 100 0 0 chr10 14690428 14690739 -125626026 - AluY SINE Alu 0 311 1 23 33 0 0 chr10 14690740 14690770 -125625995 + AT_rich Low_complexity Low_complexity 1 30 0 2089 106 13 10 chr10 14691827 14692128 -125624637 + AluSx SINE Alu 1 302 -10 1512 186 0 4 chr10 14692872 14693146 -125623619 - AluJo SINE Alu -8 304 32 815 247 58 25 chr10 14694601 14694844 -125621921 + MIR SINE MIR 2 252 -10 1385 187 0 8 chr10 14695697 14695954 -125620811 - AluJo SINE Alu -21 291 37 342 315 74 19 chr10 14695994 14696156 -125620609 - MIR3 SINE MIR -8 200 30 185 315 0 81 chr10 14696310 14696421 -125620344 + L2 LINE L2 2986 3087 -185 876 158 0 0 chr10 14696511 14696644 -125620121 + AluSq/x SINE Alu 1 133 -180 698 208 86 63 chr10 14697228 14697429 -125619336 + MIR SINE MIR 6 202 -60 10694 92 26 4 chr10 14697934 14699378 -125617387 + Charlie3 DNA MER1_type 543 2017 -693 367 124 38 29 chr10 14699496 14699601 -125617164 + GA-rich Low_complexity Low_complexity 1 106 0 603 116 0 0 chr10 14700122 14700217 -125616548 - L1MA4A LINE L1 -4 6299 6205 2183 105 3 0 chr10 14700549 14700854 -125615911 - AluSp SINE Alu -5 308 3 2027 123 0 16 chr10 14702469 14702779 -125613986 - AluSx SINE Alu -7 305 1 304 249 185 44 chr10 14702947 14703152 -125613613 + LTR33A LTR ERVL 112 345 -178 346 335 71 22 chr10 14704383 14704565 -125612200 - MIR SINE MIR -13 249 59 2300 78 0 0 chr10 14705374 14705668 -125611097 + AluY SINE Alu 1 294 -17 336 280 54 103 chr10 14706301 14706523 -125610242 + MIR SINE MIR 10 223 -39 195 354 73 12 chr10 14707263 14707345 -125609420 - L3b LINE CR1 -10 1573 1487 400 283 72 108 chr10 14707562 14707813 -125608952 - MIR SINE MIR -15 247 6 373 301 178 14 chr10 14708090 14708303 -125608462 - MIR SINE MIR -12 250 3 250 236 14 42 chr10 14709648 14709720 -125607045 - MIR3 SINE MIR -30 178 109 248 290 20 30 chr10 14710769 14710869 -125605896 - MIR SINE MIR -138 124 26 2211 93 3 7 chr10 14710982 14711271 -125605494 + AluSc SINE Alu 1 288 -21 293 278 14 0 chr10 14711885 14711957 -125604808 + L2 LINE L2 3191 3263 -9 206 301 16 73 chr10 14711986 14712109 -125604656 - MIR SINE MIR -135 127 12 211 331 33 16 chr10 14712333 14712454 -125604311 - MIR SINE MIR -136 126 4 2301 97 0 10 chr10 14713163 14713462 -125603303 - AluSx SINE Alu -16 296 1 2457 227 5 34 chr10 14713489 14714049 -125602716 + MER74A LTR ERVL 1 544 -14 222 302 108 14 chr10 14714252 14714391 -125602374 + MIR SINE MIR 56 207 -55 256 295 155 0 chr10 14715844 14715973 -125600792 + MIR3 SINE MIR 58 206 -2 337 306 0 19 chr10 14716007 14716115 -125600650 + MER81 DNA DNA 8 113 -1 27 73 0 0 chr10 14716164 14716219 -125600546 + AT_rich Low_complexity Low_complexity 1 55 0 310 203 61 0 chr10 14716238 14716401 -125600364 + (TA)n Simple_repeat Simple_repeat 1 173 0 180 297 47 0 chr10 14716442 14716506 -125600259 + MIR SINE MIR 196 262 0 1436 216 11 0 chr10 14717194 14717476 -125599289 + AluJb SINE Alu 18 302 -10 1822 132 0 78 chr10 14717490 14717824 -125598941 + AluSx SINE Alu 1 308 -4 264 158 0 0 chr10 14718631 14718688 -125598077 + A-rich Low_complexity Low_complexity 1 57 0 787 169 23 0 chr10 14719856 14719986 -125596779 - FLAM_A SINE Alu 0 133 1 2227 90 0 4 chr10 14720436 14720746 -125596019 - AluSc SINE Alu 0 309 1 312 298 58 0 chr10 14721514 14721618 -125595147 + L2 LINE L2 3155 3264 -8 189 296 0 0 chr10 14723870 14723968 -125592797 + (TG)n Simple_repeat Simple_repeat 2 99 0 232 269 0 0 chr10 14724010 14724062 -125592703 + (TATG)n Simple_repeat Simple_repeat 1 52 0 1881 204 34 0 chr10 14725069 14725422 -125591343 + MLT1A1 LTR MaLR 1 365 0 2226 110 0 22 chr10 14725866 14726185 -125590580 + AluSx SINE Alu 1 312 0 381 315 109 38 chr10 14726399 14726637 -125590128 - MIR SINE MIR 0 262 8 335 114 107 0 chr10 14726876 14727183 -125589582 + (TA)n Simple_repeat Simple_repeat 1 339 0 201 339 57 24 chr10 14727206 14727330 -125589435 + L2 LINE L2 2600 2727 -587 2470 73 0 16 chr10 14727407 14727721 -125589044 - AluY SINE Alu -2 309 1 372 336 14 21 chr10 14727863 14728003 -125588762 + MIR SINE MIR 1 139 -123 1072 235 13 13 chr10 14728455 14728693 -125588072 + MER8 DNA MER2_type 2 239 0 582 171 0 27 chr10 14728799 14728910 -125587855 - FLAM_A SINE Alu -5 137 30 504 0 0 0 chr10 14730740 14730796 -125585969 + (CACAA)n Simple_repeat Simple_repeat 4 59 0 1519 143 0 0 chr10 14731258 14731475 -125585290 + AluSx SINE Alu 1 217 -95 916 277 92 60 chr10 14732175 14732662 -125584103 + MLT1J LTR MaLR 7 509 -2 261 299 0 0 chr10 14733714 14733791 -125582974 + MER116 DNA Mariner 3 79 -1 861 170 0 0 chr10 14734297 14734438 -125582327 + FLAM_C SINE Alu 1 141 -2 1470 221 215 67 chr10 14734544 14735721 -125581044 - L1MC5 LINE L1 -226 7735 6379 4101 107 19 0 chr10 14735804 14736376 -125580389 + L1PA16 LINE L1 5575 6157 -9 1694 279 59 28 chr10 14736601 14737247 -125579518 - L1MC4a LINE L1 -1780 6028 5363 2157 100 3 44 chr10 14738703 14739023 -125577742 + AluSx SINE Alu 1 307 -5 864 131 23 0 chr10 14739031 14739161 -125577604 + AluJb SINE Alu 172 304 -8 315 0 0 0 chr10 14739645 14739680 -125577085 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 886 167 19 0 chr10 14739835 14739991 -125576774 - FRAM SINE Alu -2 174 16 1417 193 49 10 chr10 14739997 14740303 -125576462 - L1MB2 LINE L1 -2 6169 5852 210 71 0 0 chr10 14740555 14740583 -125576182 + (A)n Simple_repeat Simple_repeat 1 28 0 1216 253 0 20 chr10 14741122 14741426 -125575339 - AluSx SINE Alu -2 300 3 272 250 20 30 chr10 14743543 14743643 -125573122 - MIR3 SINE MIR -28 180 82 409 170 0 47 chr10 14743737 14743843 -125572922 + L1M LINE L1 5291 5391 -789 2124 128 0 0 chr10 14744658 14744955 -125571810 - AluSx SINE Alu -15 297 1 2509 161 9 36 chr10 14745325 14745771 -125570994 + Tigger2a DNA MER2_type 1 434 0 192 152 0 0 chr10 14745897 14745930 -125570835 + (TG)n Simple_repeat Simple_repeat 1 33 0 180 176 0 0 chr10 14745941 14745975 -125570790 + CT-rich Low_complexity Low_complexity 1 34 0 415 241 46 0 chr10 14747290 14747398 -125569367 - MER33 DNA MER1_type -211 113 1 2226 157 78 2 chr10 14747628 14748024 -125568741 + MSTB LTR MaLR 1 426 0 596 290 15 25 chr10 14749071 14749271 -125567494 + LTR16B LTR ERVL 5 202 -262 267 263 40 13 chr10 14749253 14749329 -125567436 + LTR16B LTR ERVL 385 462 -2 * 264 229 16 0 chr10 14749377 14749438 -125567327 + L2 LINE L2 3250 3311 -2 193 293 17 0 chr10 14749846 14749904 -125566861 - L2 LINE L2 -1 3312 3254 300 197 28 14 chr10 14750284 14750355 -125566410 + MER5A DNA MER1_type 91 162 -27 231 247 56 135 chr10 14750615 14750649 -125566116 + LTR67 LTR ERVL 387 422 -135 2444 126 22 0 chr10 14750649 14751005 -125565760 - THE1B LTR MaLR 0 364 1 231 247 56 135 chr10 14751005 14751148 -125565617 + LTR67 LTR ERVL 422 550 -7 210 333 95 48 chr10 14752330 14752519 -125564246 + L2 LINE L2 2894 3091 -181 201 195 24 0 chr10 14752580 14752621 -125564144 + L2 LINE L2 3231 3272 0 309 151 288 0 chr10 14752721 14752794 -125563971 + MLT1J1 LTR MaLR 1 94 -352 332 262 8 74 chr10 14752839 14752961 -125563804 + MLT1J2 LTR MaLR 337 450 0 548 282 11 40 chr10 14753165 14753215 -125563550 - MER5A DNA MER1_type -14 175 125 2184 137 0 0 chr10 14753215 14753521 -125563244 + AluSx SINE Alu 1 306 -6 548 282 11 40 chr10 14753521 14753644 -125563121 - MER5A DNA MER1_type -64 125 7 356 301 80 6 chr10 14753734 14753897 -125562868 - MER5A DNA MER1_type -14 175 1 467 281 65 55 chr10 14753904 14754121 -125562644 + MIR SINE MIR 16 234 -28 432 280 53 26 chr10 14754159 14754345 -125562420 + MIR SINE MIR 19 208 -54 1482 111 13 25 chr10 14754477 14754515 -125562250 - L1MA5A LINE L1 -5 6292 6255 2706 120 24 19 chr10 14754515 14754941 -125561824 - MSTA LTR MaLR 0 428 1 1482 111 13 25 chr10 14754941 14755137 -125561628 - L1MA5A LINE L1 -42 6255 6061 339 169 67 22 chr10 14755137 14755226 -125561539 + L1MC5 LINE L1 7833 7925 -36 181 73 24 24 chr10 14755243 14755284 -125561481 + (CAAAA)n Simple_repeat Simple_repeat 1 41 0 232 316 0 13 chr10 14756315 14756391 -125560374 + MIR SINE MIR 37 111 -97 368 253 77 71 chr10 14756393 14756523 -125560242 - MIR SINE MIR -33 229 96 2235 110 0 0 chr10 14756523 14756850 -125559915 + AluSx SINE Alu 1 312 0 368 253 77 71 chr10 14756850 14756901 -125559864 - MIR SINE MIR -166 96 47 276 186 0 0 chr10 14757843 14757902 -125558863 + (CA)n Simple_repeat Simple_repeat 1 59 0 375 23 0 0 chr10 14757989 14758033 -125558732 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 2240 107 0 3 chr10 14758299 14758598 -125558167 - AluSc SINE Alu -11 298 1 322 310 11 0 chr10 14759088 14759175 -125557590 - L2 LINE L2 -51 3221 3134 429 296 18 12 chr10 14759348 14759517 -125557248 + MLT1L LTR MaLR 410 579 -36 298 167 19 0 chr10 14759691 14759745 -125557020 + MIR SINE MIR 110 164 -98 1810 186 0 6 chr10 14760040 14760532 -125556233 - AluJb SINE Alu 0 312 2 333 0 0 0 chr10 14761501 14761538 -125555227 + (TA)n Simple_repeat Simple_repeat 2 38 0 30 27 0 0 chr10 14762352 14762389 -125554376 + AT_rich Low_complexity Low_complexity 1 37 0 1504 165 57 25 chr10 14762401 14762680 -125554085 - AluJo SINE Alu -24 288 1 1979 124 31 7 chr10 14764142 14764433 -125552332 + AluSx SINE Alu 1 298 -14 930 204 3 0 chr10 14766378 14766674 -125550091 + (TGGA)n Simple_repeat Simple_repeat 1 297 0 746 202 6 0 chr10 14766690 14766868 -125549897 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 3021 107 9 5 chr10 14767291 14767723 -125549042 + MER57B LTR ERV1 1 434 0 4120 91 12 116 chr10 14768301 14769041 -125547724 + MER4A LTR ERV1 2 664 0 365 270 63 0 chr10 14770291 14770402 -125546363 - L2 LINE L2 -1 3271 3154 2362 88 7 3 chr10 14770608 14770915 -125545850 + AluSg SINE Alu 1 308 -2 1725 204 0 6 chr10 14771565 14771879 -125544886 - AluJo SINE Alu 0 312 1 1996 134 0 3 chr10 14772188 14772492 -125544273 - AluSx SINE Alu 0 303 1 241 250 0 0 chr10 14773930 14773982 -125542783 + (TG)n Simple_repeat Simple_repeat 2 53 0 299 253 20 20 chr10 14774741 14774840 -125541925 - MIR3 SINE MIR -28 180 82 4693 149 57 7 chr10 14774942 14775731 -125541034 + L1MB3 LINE L1 5308 6142 -41 1809 154 21 3 chr10 14775731 14776038 -125540727 - AluSx SINE Alu 0 312 1 4693 149 57 7 chr10 14776038 14776080 -125540685 + L1MB3 LINE L1 6142 6180 -3 192 125 0 0 chr10 14776445 14776477 -125540288 + (GGGGA)n Simple_repeat Simple_repeat 4 35 0 181 269 19 0 chr10 14777060 14777112 -125539653 - MIR3 SINE MIR -25 183 131 231 270 54 27 chr10 14777129 14777240 -125539525 - L2 LINE L2 -809 2505 2392 256 305 116 32 chr10 14777314 14777409 -125539356 + MIR3 SINE MIR 4 106 -102 453 285 0 31 chr10 14777782 14777912 -125538853 - MIR SINE MIR -129 133 8 655 221 68 0 chr10 14778168 14778331 -125538434 + MIR SINE MIR 64 237 -25 228 111 0 0 chr10 14778529 14778565 -125538200 + (CACAA)n Simple_repeat Simple_repeat 2 37 0 3002 140 100 2 chr10 14779469 14779949 -125536816 - MER1A DNA MER1_type 0 527 1 532 237 84 28 chr10 14779972 14780187 -125536578 + MIR SINE MIR 28 254 -8 2438 82 3 3 chr10 14780611 14780914 -125535851 + AluSg SINE Alu 1 303 -7 1620 159 3 97 chr10 14781477 14781798 -125534967 - AluJo SINE Alu -10 292 2 2217 129 140 11 chr10 14781980 14782359 -125534406 - MSTA LTR MaLR 0 428 1 2270 200 39 6 chr10 14783271 14783781 -125532984 + L1PA16 LINE L1 5624 6150 -16 241 224 0 0 chr10 14783827 14783876 -125532889 + CT-rich Low_complexity Low_complexity 3 51 0 2458 81 3 3 chr10 14784247 14784556 -125532209 - AluY SINE Alu -2 309 1 1495 168 4 15 chr10 14784724 14784986 -125531779 + AluJo SINE Alu 41 299 -13 425 242 74 37 chr10 14785483 14785673 -125531092 - MER117 DNA MER1_type 0 197 1 569 287 146 29 chr10 14785811 14786229 -125530536 + LTR33A LTR ERVL 23 489 -34 1559 170 18 18 chr10 14787143 14787425 -125529340 + AluJo SINE Alu 9 290 -22 492 272 96 83 chr10 14788076 14788400 -125528365 + L1ME3A LINE L1 5553 5880 -284 1635 184 3 20 chr10 14790462 14790761 -125526004 + AluJo SINE Alu 12 305 -7 264 185 0 0 chr10 14790761 14790815 -125525950 + GA-rich Low_complexity Low_complexity 2 55 0 965 144 0 6 chr10 14790817 14790997 -125525768 + (GGA)n Simple_repeat Simple_repeat 1 179 0 322 152 15 15 chr10 14791359 14791425 -125525340 - MER33 DNA MER1_type -4 320 255 5039 141 26 54 chr10 14791426 14791890 -125524875 + L1MA4A LINE L1 4326 4801 -1375 2046 131 3 3 chr10 14791890 14792181 -125524584 + AluSx SINE Alu 1 291 -21 5039 141 26 54 chr10 14792181 14792856 -125523909 + L1MA4A LINE L1 4801 5433 -743 5112 126 37 20 chr10 14792927 14793078 -125523687 + L1MA4A LINE L1 5433 5580 -723 2289 97 0 7 chr10 14793078 14793378 -125523387 - AluSq SINE Alu -15 298 1 5112 126 37 20 chr10 14793378 14794082 -125522683 + L1MA4A LINE L1 5580 6303 0 895 218 28 23 chr10 14794153 14794369 -125522396 - MER33 DNA MER1_type -106 218 2 228 35 0 0 chr10 14794753 14794782 -125521983 + (T)n Simple_repeat Simple_repeat 1 29 0 197 245 0 41 chr10 14795719 14795768 -125520997 + L2 LINE L2 3224 3270 -2 264 320 68 27 chr10 14796758 14796905 -125519860 + MIR SINE MIR 34 186 -76 1140 110 129 29 chr10 14796908 14797117 -125519648 - MER30 DNA MER1_type 0 230 1 5205 149 22 10 chr10 14797150 14798142 -125518623 + L1PA16 LINE L1 5159 6163 -3 213 205 24 60 chr10 14798191 14798357 -125518408 + (TATAA)n Simple_repeat Simple_repeat 3 162 0 181 325 48 0 chr10 14799017 14799100 -125517665 - L2 LINE L2 0 3272 3186 780 226 73 8 chr10 14799101 14799349 -125517416 + L1MA4 LINE L1 6029 6292 -8 2111 138 0 22 chr10 14799372 14799691 -125517074 + AluSx SINE Alu 1 312 0 276 253 103 0 chr10 14800312 14800399 -125516366 + MER63 DNA MER1_type 1 722 -340 310 285 263 0 chr10 14800804 14800983 -125515782 - MIR SINE MIR 0 262 37 1589 205 61 49 chr10 14801353 14801782 -125514983 + LTR47B LTR ERVL 10 443 0 219 324 69 59 chr10 14801843 14802047 -125514718 - L3b LINE CR1 -195 1388 1183 227 189 22 22 chr10 14802902 14802992 -125513773 + CT-rich Low_complexity Low_complexity 1 90 0 205 138 0 0 chr10 14805682 14805711 -125511054 + (GGA)n Simple_repeat Simple_repeat 2 30 0 277 131 33 0 chr10 14806387 14806448 -125510317 + CT-rich Low_complexity Low_complexity 1 63 0 335 60 20 0 chr10 14806657 14806707 -125510058 + (TTCA)n Simple_repeat Simple_repeat 2 52 0 444 19 0 0 chr10 14806993 14807046 -125509719 + (TG)n Simple_repeat Simple_repeat 1 53 0 1834 153 10 10 chr10 14807649 14807943 -125508822 - AluJo SINE Alu -10 302 9 351 274 9 38 chr10 14808219 14808325 -125508440 - L2 LINE L2 0 3313 3211 2316 96 3 3 chr10 14808593 14808896 -125507869 - AluSc SINE Alu -4 305 3 1635 157 98 11 chr10 14809312 14809599 -125507166 - AluSx SINE Alu 0 312 1 309 298 8 24 chr10 14810103 14810227 -125506538 - MIR SINE MIR -9 253 132 200 333 0 0 chr10 14810462 14810525 -125506240 - L2 LINE L2 0 3313 3251 2062 145 7 7 chr10 14811878 14812188 -125504577 + AluSx SINE Alu 1 310 -2 253 265 159 8 chr10 14812289 14812421 -125504344 - MIR SINE MIR -10 252 101 356 200 35 0 chr10 14813731 14813816 -125502949 - L1MA7 LINE L1 0 6291 6204 1920 159 0 14 chr10 14813823 14814119 -125502646 - AluJb SINE Alu -18 294 3 1469 192 4 29 chr10 14814388 14814664 -125502101 + AluJo SINE Alu 5 273 -39 1846 81 95 32 chr10 14816247 14816530 -125500235 - AluSg SINE Alu -1 309 9 26 0 0 0 chr10 14816929 14816955 -125499810 + AT_rich Low_complexity Low_complexity 1 26 0 183 80 0 0 chr10 14818264 14818289 -125498476 + (A)n Simple_repeat Simple_repeat 1 25 0 263 230 30 30 chr10 14818393 14818493 -125498272 + MER72 LTR ERV1 377 476 -246 394 196 155 21 chr10 14818518 14818716 -125498049 + LTR45B LTR ERV1 264 525 0 1446 207 21 17 chr10 14818974 14819264 -125497501 + AluJo SINE Alu 11 301 -11 261 139 0 0 chr10 14819264 14819307 -125497458 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 281 260 140 0 chr10 14819402 14819502 -125497263 - MIR3 SINE MIR -10 198 85 772 186 0 7 chr10 14819715 14819855 -125496910 + AluJb SINE Alu 92 230 -82 1503 194 0 4 chr10 14820784 14821052 -125495713 + AluJb SINE Alu 36 302 -10 2368 95 0 0 chr10 14821418 14821714 -125495051 + AluSq SINE Alu 1 296 -17 182 275 50 25 chr10 14821816 14821896 -125494869 - MIR SINE MIR -93 115 34 189 244 0 0 chr10 14822251 14822292 -125494473 - MIR SINE MIR -110 152 112 473 162 49 162 chr10 14822435 14822490 -125494275 - LTR45B LTR ERV1 -15 474 414 1469 175 13 58 chr10 14822490 14822799 -125493966 - AluJo SINE Alu -4 308 14 473 162 49 162 chr10 14822799 14822976 -125493789 - LTR45B LTR ERV1 -75 414 304 180 0 0 0 chr10 14823932 14823952 -125492813 + (TC)n Simple_repeat Simple_repeat 1 20 0 237 146 0 0 chr10 14825572 14825620 -125491145 + (CA)n Simple_repeat Simple_repeat 1 48 0 31 44 0 0 chr10 14825810 14825855 -125490910 + AT_rich Low_complexity Low_complexity 1 45 0 205 273 0 0 chr10 14826334 14826389 -125490376 + (TTCA)n Simple_repeat Simple_repeat 4 58 0 2388 56 0 3 chr10 14826456 14826762 -125490003 + AluY SINE Alu 1 311 0 231 188 20 59 chr10 14826904 14827005 -125489760 + (TTATA)n Simple_repeat Simple_repeat 2 98 0 309 155 0 0 chr10 14828258 14828316 -125488449 + (CA)n Simple_repeat Simple_repeat 1 58 0 1934 115 87 0 chr10 14829501 14829787 -125486978 - AluSq SINE Alu -2 311 1 584 261 102 28 chr10 14830904 14831119 -125485646 + MIR SINE MIR 32 262 0 414 0 0 0 chr10 14831409 14831455 -125485310 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 664 138 0 43 chr10 14831458 14831574 -125485191 - AluSg/x SINE Alu -26 283 173 1764 130 0 0 chr10 14831574 14831813 -125484952 - AluSq SINE Alu -71 242 4 27 29 0 0 chr10 14831984 14832018 -125484747 + AT_rich Low_complexity Low_complexity 1 34 0 601 123 29 36 chr10 14832018 14832156 -125484609 - L1MA7 LINE L1 -2 6289 6153 951 129 17 51 chr10 14832156 14832334 -125484431 - AluJo SINE Alu -17 295 124 1576 107 4 25 chr10 14832422 14832664 -125484101 - AluSx SINE Alu -16 296 60 1351 231 207 17 chr10 14832864 14833521 -125483244 + LTR50 LTR ERVL 14 795 0 2239 90 0 45 chr10 14833978 14834288 -125482477 + AluSg SINE Alu 1 296 -14 2273 81 3 0 chr10 14834517 14834835 -125481930 - AluSx SINE Alu 0 319 1 1910 157 3 3 chr10 14834913 14835207 -125481558 - AluJb SINE Alu -18 294 1 1736 160 20 20 chr10 14836276 14836570 -125480195 + AluJb SINE Alu 1 294 -18 234 91 0 0 chr10 14837178 14837211 -125479554 + (T)n Simple_repeat Simple_repeat 1 33 0 696 217 6 12 chr10 14837325 14837486 -125479279 - MER3 DNA MER1_type -43 166 7 2226 125 0 0 chr10 14837659 14837964 -125478801 + AluSx SINE Alu 1 305 -7 2044 130 0 37 chr10 14838650 14838974 -125477791 + AluSx SINE Alu 1 312 0 561 287 81 60 chr10 14839018 14839366 -125477399 + L1ME4a LINE L1 5524 5878 -243 1469 77 10 0 chr10 14839373 14839567 -125477198 - Charlie3 DNA MER1_type -4 2706 2511 196 287 49 63 chr10 14839664 14839807 -125476958 + MIR SINE MIR 117 257 -5 297 0 0 0 chr10 14839822 14839855 -125476910 + (CA)n Simple_repeat Simple_repeat 1 33 0 344 245 109 54 chr10 14839865 14840012 -125476753 + L1ME4a LINE L1 5964 6118 -3 1625 182 17 7 chr10 14840054 14840345 -125476420 + AluJo SINE Alu 1 294 -18 281 171 0 43 chr10 14841253 14841323 -125475442 - MLT1C LTR MaLR -202 265 199 283 186 35 115 chr10 14841491 14841604 -125475161 + MLT1B LTR MaLR 76 179 -288 2193 59 96 0 chr10 14841605 14841875 -125474890 + AluY SINE Alu 5 300 -11 1001 170 0 13 chr10 14841875 14842034 -125474731 + AluJb SINE Alu 135 291 -21 638 195 17 126 chr10 14842044 14842255 -125474510 + MLT1B LTR MaLR 185 371 -19 1616 179 135 3 chr10 14842255 14842574 -125474191 + MLT1A1 LTR MaLR 1 361 -4 638 195 17 126 chr10 14842574 14842593 -125474172 + MLT1B LTR MaLR 371 390 0 256 250 120 11 chr10 14842702 14842794 -125473971 - L2 LINE L2 -18 3254 3153 1992 138 0 3 chr10 14842851 14843164 -125473601 - AluSg SINE Alu 0 312 1 555 314 54 8 chr10 14843320 14843562 -125473203 - MIR SINE MIR -2 260 8 1752 173 0 24 chr10 14845090 14845413 -125471352 + AluJo SINE Alu 1 316 0 556 292 109 0 chr10 14845441 14845633 -125471132 - MIR SINE MIR -3 259 47 1447 137 48 36 chr10 14845852 14846100 -125470665 + THE1B LTR MaLR 1 251 -113 * 1674 122 4 4 chr10 14846095 14846341 -125470424 + THE1B LTR MaLR 119 364 0 234 254 0 0 chr10 14846359 14846422 -125470343 - MER91 DNA MER1_type -77 63 1 474 325 76 0 chr10 14846484 14846641 -125470124 + MIR3 SINE MIR 29 197 -11 820 152 23 8 chr10 14848521 14848653 -125468112 + AluSq/x SINE Alu 2 135 -178 2010 142 30 57 chr10 14849381 14849747 -125467018 + THE1B LTR MaLR 1 356 -8 281 384 29 0 chr10 14849782 14849920 -125466845 + MER91A DNA MER1_type 47 188 -8 2148 128 3 0 chr10 14849964 14850261 -125466504 - AluSx SINE Alu -14 298 1 557 129 20 30 chr10 14850704 14850805 -125465960 + AluSq SINE Alu 2 101 -212 428 17 83 33 chr10 14850805 14850865 -125465900 - THE1B LTR MaLR -301 63 1 1819 88 0 0 chr10 14850890 14851117 -125465648 + AluSq SINE Alu 87 313 0 193 154 0 26 chr10 14851529 14851568 -125465197 - L2 LINE L2 -13 3300 3263 477 34 0 0 chr10 14852912 14852971 -125463794 + (TG)n Simple_repeat Simple_repeat 2 60 0 1702 147 19 8 chr10 14853718 14853983 -125462782 - AluJo SINE Alu -39 273 6 1882 126 4 22 chr10 14854931 14855208 -125461557 + AluSx SINE Alu 1 272 -40 243 61 0 0 chr10 14855222 14855255 -125461510 + (CAA)n Simple_repeat Simple_repeat 1 33 0 1950 164 3 0 chr10 14855591 14855895 -125460870 + AluJb SINE Alu 1 305 -7 222 37 0 0 chr10 14855895 14855922 -125460843 + (GA)n Simple_repeat Simple_repeat 2 28 0 728 77 77 62 chr10 14858240 14858370 -125458395 - L1PA8 LINE L1 -1 6171 6040 243 305 86 8 chr10 14858388 14858516 -125458249 + L2 LINE L2 2218 2355 -959 808 196 10 95 chr10 14858560 14858845 -125457920 - MLT1B LTR MaLR -31 359 1 194 310 51 35 chr10 14859108 14859305 -125457460 + L2 LINE L2 2772 2969 -303 212 239 22 0 chr10 14859326 14859372 -125457393 + CT-rich Low_complexity Low_complexity 2 48 0 2312 125 0 0 chr10 14859372 14859683 -125457082 - AluSx SINE Alu -1 311 1 248 250 53 83 chr10 14859833 14859965 -125456800 + L2 LINE L2 3184 3311 -2 2213 113 7 0 chr10 14860011 14860302 -125456463 - AluSc SINE Alu -15 294 2 425 293 9 0 chr10 14860454 14860570 -125456195 - MER94 DNA DNA -4 130 14 216 122 0 0 chr10 14861209 14861250 -125455515 + (T)n Simple_repeat Simple_repeat 1 41 0 1245 188 21 25 chr10 14861630 14861869 -125454896 - AluJo SINE Alu -73 239 2 491 343 64 4 chr10 14862416 14862652 -125454113 + MIR SINE MIR 13 262 0 6124 199 13 4 chr10 14862753 14863478 -125453287 - L1PA15 LINE L1 0 6165 5448 2361 80 0 13 chr10 14863478 14863777 -125452988 - AluY SINE Alu -16 295 1 6124 199 13 4 chr10 14863777 14865084 -125451681 - L1PA15 LINE L1 -717 5448 4121 390 236 242 13 chr10 14865098 14865315 -125451450 + MIR SINE MIR 3 262 0 2048 117 3 20 chr10 14865419 14865718 -125451047 + AluSx SINE Alu 1 294 -18 2334 62 3 0 chr10 14867290 14867580 -125449185 - AluY SINE Alu -20 291 1 243 0 0 0 chr10 14869128 14869155 -125447610 + (A)n Simple_repeat Simple_repeat 1 27 0 443 122 0 27 chr10 14869169 14869243 -125447522 - AluJo SINE Alu -178 134 63 2148 130 0 3 chr10 14869457 14869764 -125447001 - AluSx SINE Alu -6 306 1 437 299 136 27 chr10 14870272 14870493 -125446272 - MIR SINE MIR -8 254 10 3722 80 0 0 chr10 14870649 14871112 -125445653 - L1PA8 LINE L1 0 6172 5710 2381 59 0 0 chr10 14871479 14871793 -125444972 + AluY SINE Alu 1 314 0 1076 239 8 8 chr10 14874910 14875161 -125441604 + L1MB3 LINE L1 5534 5784 -387 258 136 0 0 chr10 14875168 14875212 -125441553 + (TCCA)n Simple_repeat Simple_repeat 1 44 0 2131 124 46 66 chr10 14875212 14875322 -125441443 + L1MB3 LINE L1 5782 5893 -290 1883 137 105 37 chr10 14875322 14875673 -125441092 + THE1C LTR MaLR 1 375 0 2131 124 46 66 chr10 14875673 14875972 -125440793 + L1MB3 LINE L1 5893 6183 0 369 245 46 46 chr10 14876388 14876539 -125440226 + MLT1I LTR MaLR 16 166 -243 264 305 195 6 chr10 14876771 14876945 -125439820 - MIR SINE MIR -36 226 20 220 313 187 11 chr10 14877364 14877546 -125439219 + MIR SINE MIR 1 214 -48 2352 134 45 18 chr10 14877626 14878006 -125438759 + MLT1B LTR MaLR 1 390 0 462 296 0 0 chr10 14878508 14878763 -125438002 + (CA)n Simple_repeat Simple_repeat 1 255 0 345 117 0 0 chr10 14879628 14879688 -125437077 + (TC)n Simple_repeat Simple_repeat 2 61 0 248 316 42 11 chr10 14880235 14880330 -125436435 - MIR SINE MIR -6 256 159 253 231 0 177 chr10 14881157 14881202 -125435563 - MIR SINE MIR -67 141 90 2214 123 0 3 chr10 14881202 14881510 -125435255 + AluSx SINE Alu 1 307 -5 253 231 0 177 chr10 14881510 14881630 -125435135 - MIR SINE MIR -118 90 2 468 285 47 28 chr10 14881717 14881931 -125434834 + L1ME LINE L1 5597 5814 -307 2009 103 35 14 chr10 14882082 14882394 -125434371 - AluSq SINE Alu 0 313 1 1380 213 86 98 chr10 14883208 14883757 -125433008 + MLT1F LTR MaLR 1 542 0 491 243 57 110 chr10 14883829 14884092 -125432673 + MIR SINE MIR 13 261 -1 3144 216 118 29 chr10 14884173 14885060 -125431705 - L1MC4 LINE L1 -1 8041 7059 227 79 26 0 chr10 14885060 14885098 -125431667 + (TTCA)n Simple_repeat Simple_repeat 4 42 0 3144 216 118 29 chr10 14885098 14885178 -125431587 - L1MC4 LINE L1 -983 7059 6988 370 0 0 0 chr10 14886885 14886928 -125429837 + L1PA3 LINE L1 6110 6152 -3 2034 142 0 10 chr10 14887855 14888157 -125428608 + AluSx SINE Alu 2 300 -12 375 281 54 37 chr10 14888189 14888538 -125428227 + L1ME1 LINE L1 4258 4612 -1534 28 0 0 0 chr10 14888547 14888575 -125428190 + AT_rich Low_complexity Low_complexity 1 28 0 825 177 0 41 chr10 14888835 14888982 -125427783 + FLAM_C SINE Alu 2 142 -1 2012 138 0 7 chr10 14889180 14889477 -125427288 + AluSx SINE Alu 1 295 -17 1739 220 68 20 chr10 14889633 14890074 -125426691 + MLT1C LTR MaLR 6 467 0 3091 230 73 32 chr10 14890079 14891303 -125425462 + L1ME1 LINE L1 4882 6161 -5 23 54 0 0 chr10 14891492 14891529 -125425236 + AT_rich Low_complexity Low_complexity 1 37 0 353 225 172 33 chr10 14892990 14893141 -125423624 + MIR3 SINE MIR 5 176 -32 393 351 27 20 chr10 14893797 14893945 -125422820 + MIR3 SINE MIR 42 190 -18 360 0 0 0 chr10 14894075 14894115 -125422650 + (CA)n Simple_repeat Simple_repeat 2 41 0 248 299 0 11 chr10 14894115 14894202 -125422563 + CT-rich Low_complexity Low_complexity 4 89 0 291 304 80 32 chr10 14894387 14894512 -125422253 + MIR SINE MIR 58 188 -74 346 248 66 8 chr10 14896228 14896349 -125420416 - MIR SINE MIR -48 214 87 201 343 27 0 chr10 14896617 14896690 -125420075 - L2 LINE L2 0 3272 3198 2236 85 0 7 chr10 14896912 14897205 -125419560 - AluSg SINE Alu -19 291 1 921 150 26 107 chr10 14898230 14898463 -125418302 - MER20 DNA MER1_type -5 214 1 303 28 0 0 chr10 14898624 14898660 -125418105 + (TG)n Simple_repeat Simple_repeat 1 36 0 352 289 106 59 chr10 14899461 14899655 -125417110 - MIR SINE MIR -55 207 1 1539 196 44 69 chr10 14901416 14901848 -125414917 - MLT1D LTR MaLR 0 505 85 246 178 0 0 chr10 14901848 14901893 -125414872 + MLT2B3 LTR ERVL 1 45 -509 1800 201 5 62 chr10 14902074 14902463 -125414302 + MLT2B3 LTR ERVL 182 548 -6 609 157 0 0 chr10 14902467 14902556 -125414209 - MLT1D LTR MaLR -415 90 2 2834 194 55 19 chr10 14902785 14902997 -125413768 - MER6A DNA MER2_type -260 605 402 2144 176 106 3 chr10 14902997 14903383 -125413382 - MSTB LTR MaLR 0 426 1 2834 194 55 19 chr10 14903383 14903754 -125413011 - MER6A DNA MER2_type -463 402 1 43 20 0 0 chr10 14904077 14904127 -125412638 + AT_rich Low_complexity Low_complexity 1 50 0 305 305 40 20 chr10 14904332 14904483 -125412282 - MLT1I LTR MaLR -188 221 68 477 66 16 0 chr10 14904724 14904785 -125411980 - MSTB LTR MaLR -49 377 316 1543 201 39 7 chr10 14905056 14905182 -125411583 + AluSx SINE Alu 1 122 -190 468 51 0 0 chr10 14905182 14905241 -125411524 + (CA)n Simple_repeat Simple_repeat 2 60 0 1543 201 39 7 chr10 14905241 14905397 -125411368 + AluSx SINE Alu 122 292 -20 277 196 36 0 chr10 14905974 14906030 -125410735 - L2 LINE L2 0 3272 3215 196 188 203 47 chr10 14906482 14906546 -125410219 - MIR SINE MIR -70 138 65 1789 185 3 0 chr10 14907887 14908189 -125408576 + AluJo SINE Alu 1 303 -9 252 345 83 7 chr10 14908198 14908343 -125408422 + MIR3 SINE MIR 37 192 -16 1668 181 17 0 chr10 14909004 14909292 -125407473 - AluJb SINE Alu -19 293 1 1870 186 42 31 chr10 14909400 14909760 -125407005 + MLT1A1 LTR MaLR 2 365 0 2034 127 6 38 chr10 14911313 14911629 -125405136 - AluSx SINE Alu -6 306 1 200 327 125 0 chr10 14911871 14911975 -125404790 - MIR SINE MIR -62 200 84 314 244 200 0 chr10 14912044 14912159 -125404606 - MIR3 SINE MIR -61 147 10 732 186 0 0 chr10 14912446 14912559 -125404206 - FLAM_A SINE Alu -12 130 18 1820 153 26 110 chr10 14912962 14913114 -125403651 + MLT1B LTR MaLR 1 164 -226 2402 103 3 0 chr10 14913114 14913426 -125403339 - AluSp SINE Alu 0 313 1 1820 153 26 110 chr10 14913426 14913699 -125403066 + MLT1B LTR MaLR 164 390 0 1130 133 0 0 chr10 14913701 14913874 -125402891 - L1MB3 LINE L1 -10 6173 6001 2028 154 31 34 chr10 14914039 14914396 -125402369 - THE1B LTR MaLR -8 356 1 180 279 38 51 chr10 14915864 14915943 -125400822 + MIR SINE MIR 38 115 -147 499 327 22 22 chr10 14915958 14916184 -125400581 - MIR SINE MIR 0 262 37 250 286 95 16 chr10 14916198 14916324 -125400441 + MIR SINE MIR 119 254 -8 2135 115 0 16 chr10 14916500 14916804 -125399961 + AluY SINE Alu 1 299 -12 368 262 0 29 chr10 14916962 14917065 -125399700 + L2 LINE L2 2985 3084 -188 319 296 180 5 chr10 14917679 14917868 -125398897 + MIR SINE MIR 31 252 -10 221 341 65 8 chr10 14919443 14919566 -125397199 + L2 LINE L2 3184 3313 0 30 0 0 0 chr10 14920704 14920734 -125396031 + AT_rich Low_complexity Low_complexity 1 30 0 5168 142 15 35 chr10 14920734 14921726 -125395039 - L1MB1 LINE L1 0 6168 5194 * 5448 199 46 11 chr10 14921725 14922913 -125393852 + L1MB1 LINE L1 3960 5189 -957 415 212 80 29 chr10 14922924 14923061 -125393704 + MIR SINE MIR 119 262 0 1236 283 169 27 chr10 14923574 14924653 -125392112 + L1ME3 LINE L1 3768 4693 -1469 2322 96 0 3 chr10 14924653 14924945 -125391820 + AluY SINE Alu 1 291 -20 1236 283 169 27 chr10 14924945 14925221 -125391544 + L1ME3 LINE L1 4693 4929 -1233 2262 160 79 5 chr10 14925221 14925590 -125391175 + MSTD LTR MaLR 1 396 0 1236 283 169 27 chr10 14925590 14926130 -125390635 + L1ME3 LINE L1 4929 5951 -211 503 267 62 11 chr10 14929023 14929199 -125387566 - MER117 DNA MER1_type -10 187 3 181 255 20 71 chr10 14929944 14930042 -125386723 - L2 LINE L2 -706 2608 2516 * 236 330 198 0 chr10 14930024 14930130 -125386635 + MIR3 SINE MIR 34 160 -48 1068 214 35 0 chr10 14930141 14930342 -125386423 + MER58A DNA MER1_type 17 224 0 562 266 155 29 chr10 14930447 14930725 -125386040 - Charlie8 DNA MER1_type -2008 409 97 292 312 28 0 chr10 14931130 14931239 -125385526 + MER81 DNA DNA 2 113 -1 245 317 130 8 chr10 14931580 14931703 -125385062 - MIR SINE MIR -67 195 58 250 386 0 0 chr10 14931883 14931997 -125384768 + L3b LINE CR1 1120 1233 -350 224 208 292 0 chr10 14932599 14932671 -125384094 + MIR SINE MIR 55 147 -61 1601 265 77 42 chr10 14932956 14933517 -125383248 + MER77 LTR ERV1 49 598 -7 774 268 127 0 chr10 14934556 14934761 -125382004 + MIR SINE MIR 6 236 -26 339 313 57 57 chr10 14935197 14935373 -125381392 + MER5B DNA MER1_type 1 176 -2 582 211 176 0 chr10 14935393 14935535 -125381230 - MER5A DNA MER1_type -3 186 20 3366 160 5 55 chr10 14935887 14936536 -125380229 - L1MB3 LINE L1 -174 6009 5394 1191 240 59 52 chr10 14936825 14937233 -125379532 + LTR16C LTR ERVL 81 491 0 3478 107 18 10 chr10 14937779 14938274 -125378491 + L1PA11 LINE L1 5659 6157 -17 21 0 0 0 chr10 14940526 14940547 -125376218 + AT_rich Low_complexity Low_complexity 1 21 0 1591 207 0 0 chr10 14941304 14941584 -125375181 + AluJb SINE Alu 1 280 -32 191 0 24 71 chr10 14941587 14941629 -125375136 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 266 336 19 19 chr10 14941639 14941746 -125375019 + MER5A DNA MER1_type 83 189 0 2209 174 36 128 chr10 14942468 14943142 -125373623 + LTR9 LTR ERV1 1 612 0 797 269 26 19 chr10 14944558 14944826 -125371939 + L1MC4a LINE L1 5559 5828 -1980 1156 175 0 10 chr10 14944828 14945034 -125371731 + AluJb SINE Alu 105 308 -4 1728 179 0 32 chr10 14945215 14945528 -125371237 + AluJo SINE Alu 3 305 -7 513 337 20 0 chr10 14946092 14946288 -125370477 - LTR67 LTR ERVL 0 557 358 733 170 50 66 chr10 14946602 14946784 -125369981 + MLT1L LTR MaLR 216 394 -221 450 317 149 43 chr10 14946871 14947594 -125369171 + L2 LINE L2 1685 2484 -830 245 339 18 37 chr10 14947645 14947754 -125369011 + L2 LINE L2 2652 2758 -556 469 310 35 0 chr10 14947984 14948100 -125368665 - L2 LINE L2 -2 3270 3151 1158 219 180 27 chr10 14948324 14948657 -125368108 + MSTD LTR MaLR 1 384 -12 198 103 0 0 chr10 14948658 14948687 -125368078 + (GAA)n Simple_repeat Simple_repeat 2 30 0 285 296 138 26 chr10 14948847 14949036 -125367729 + MLT1K LTR MaLR 335 544 -44 202 344 103 49 chr10 14949102 14949509 -125367256 + L2 LINE L2 2538 2966 -348 269 247 31 117 chr10 14949596 14949758 -125367007 + L2 LINE L2 3122 3269 -44 329 234 0 9 chr10 14949789 14949896 -125366869 + GA-rich Low_complexity Low_complexity 4 109 0 1516 288 68 23 chr10 14950919 14951481 -125365284 + MLT1G LTR MaLR 1 587 -3 221 0 35 0 chr10 14951483 14951512 -125365253 + (TC)n Simple_repeat Simple_repeat 1 30 0 180 0 0 0 chr10 14951511 14951531 -125365234 + (CA)n Simple_repeat Simple_repeat 1 20 0 * 181 348 67 34 chr10 14951876 14952293 -125364472 + L2 LINE L2 2230 2660 -654 456 332 70 41 chr10 14953010 14953353 -125363412 + L2 LINE L2 2960 3312 -1 193 169 34 0 chr10 14953460 14953519 -125363246 + (TA)n Simple_repeat Simple_repeat 2 62 0 541 336 91 48 chr10 14953654 14953911 -125362854 - L2 LINE L2 -447 2867 2623 2475 121 114 8 chr10 14953911 14954298 -125362467 + MSTA LTR MaLR 1 428 0 541 336 91 48 chr10 14954298 14954692 -125362073 - L2 LINE L2 -691 2623 2188 268 320 55 8 chr10 14955424 14955552 -125361213 - MIR SINE MIR -7 255 122 580 256 88 57 chr10 14956043 14956270 -125360495 + MLT1K LTR MaLR 324 557 -31 2106 104 0 17 chr10 14956799 14957108 -125359657 - AluSx SINE Alu 0 304 1 246 344 45 19 chr10 14957112 14957266 -125359499 + MIR SINE MIR 60 216 -46 196 200 0 0 chr10 14957861 14957896 -125358869 + L2 LINE L2 3268 3302 -11 21 57 0 0 chr10 14958162 14958197 -125358568 + AT_rich Low_complexity Low_complexity 1 35 0 204 333 33 67 chr10 14958506 14958656 -125358109 + MIR3 SINE MIR 18 162 -46 265 291 86 26 chr10 14959580 14959731 -125357034 - MIR3 SINE MIR -22 186 27 333 68 0 0 chr10 14960779 14960823 -125355942 + (TG)n Simple_repeat Simple_repeat 1 44 0 267 85 0 51 chr10 14963088 14963147 -125353618 + (TCCC)n Simple_repeat Simple_repeat 2 57 0 1399 201 0 82 chr10 14963682 14964010 -125352755 + AluJo SINE Alu 1 301 -11 194 293 17 0 chr10 14964016 14964074 -125352691 + L2 LINE L2 3254 3312 -1 1765 148 12 70 chr10 14964074 14964404 -125352361 + AluSx SINE Alu 1 311 -1 1919 152 0 13 chr10 14966759 14967061 -125349704 + AluSx SINE Alu 1 298 -14 2755 259 24 53 chr10 14967840 14968772 -125347993 + L1ME1 LINE L1 37 941 -5455 2849 257 62 33 chr10 14968824 14970208 -125346557 + L1ME1 LINE L1 1145 4446 -1769 1446 246 81 21 chr10 14970200 14970679 -125346086 + L1MB8 LINE L1 5662 6169 -9 * 1025 212 62 78 chr10 14970688 14971046 -125345719 + L1ME1 LINE L1 5877 6228 -7 2410 97 7 0 chr10 14971130 14971472 -125345293 - AluSx SINE Alu 0 344 1 2129 73 0 77 chr10 14971854 14972167 -125344598 - AluSg SINE Alu -21 289 1 210 71 0 0 chr10 14973243 14973271 -125343494 + (A)n Simple_repeat Simple_repeat 1 28 0 1951 165 7 0 chr10 14973810 14974107 -125342658 - AluSx SINE Alu -12 300 2 984 281 169 23 chr10 14975489 14976256 -125340509 + L2 LINE L2 2420 3300 -13 26 30 0 0 chr10 14977024 14977057 -125339708 + AT_rich Low_complexity Low_complexity 1 33 0 3049 156 46 13 chr10 14977362 14977906 -125338859 + L1MC3 LINE L1 7223 7784 -1 2560 65 7 0 chr10 14977918 14978227 -125338538 + AluY SINE Alu 1 311 0 2356 108 73 14 chr10 14979177 14979521 -125337244 - THE1B LTR MaLR 0 364 1 1544 183 30 0 chr10 14979701 14979969 -125336796 + AluJo SINE Alu 11 286 -26 361 209 0 36 chr10 14979970 14980080 -125336685 + (CATATA)n Simple_repeat Simple_repeat 2 107 0 1979 152 108 33 chr10 14982002 14982505 -125334260 - MLT2A2 LTR ERVL 0 554 1 1197 168 124 51 chr10 14982778 14983052 -125333713 + MLT2B2 LTR ERVL 1 294 -221 920 253 23 19 chr10 14983054 14983311 -125333454 - LTR9 LTR ERV1 0 612 355 905 112 0 16 chr10 14983523 14983648 -125333117 + FRAM SINE Alu 34 156 -20 2251 84 26 23 chr10 14984070 14984379 -125332386 + AluY SINE Alu 1 310 -1 445 221 103 29 chr10 14986574 14986710 -125330055 + LTR33 LTR ERVL 3 148 -373 574 285 0 0 chr10 14986968 14987098 -125329667 + MER31B-int LTR ERV1 13 142 -4794 * 810 256 28 0 chr10 14987097 14987277 -125329488 + MER31B-int LTR ERV1 4734 4918 -18 1692 193 93 34 chr10 14987283 14987692 -125329073 + MER31B LTR ERV1 5 437 -29 353 203 0 0 chr10 14987714 14987778 -125328987 + LTR33 LTR ERVL 458 521 0 288 235 0 15 chr10 14989433 14989501 -125327264 - MLT1B LTR MaLR 0 390 324 2174 109 0 7 chr10 14989501 14989786 -125326979 + AluSc SINE Alu 1 283 -26 1040 166 0 0 chr10 14989791 14989985 -125326780 + AluSg/x SINE Alu 123 316 0 2207 94 13 13 chr10 14989988 14990287 -125326478 + AluY SINE Alu 1 299 -12 712 226 84 82 chr10 14990287 14990761 -125326004 + L1MC4 LINE L1 7567 8041 -1 216 0 0 0 chr10 14991672 14991696 -125325069 + (A)n Simple_repeat Simple_repeat 1 24 0 1683 146 58 143 chr10 14992044 14992477 -125324288 - MSTD LTR MaLR 0 396 1 1325 184 78 39 chr10 14993010 14993369 -125323396 - Charlie1b DNA MER1_type -100 423 51 263 307 0 0 chr10 14993504 14993579 -125323186 - L2 LINE L2 0 3313 3239 1330 197 119 25 chr10 14993580 14993900 -125322865 + MLT1A1 LTR MaLR 11 360 -5 268 212 45 0 chr10 14993900 14993966 -125322799 - L2 LINE L2 -70 3243 3175 433 243 36 0 chr10 14994031 14994142 -125322623 - MIR SINE MIR -101 161 47 1593 144 0 96 chr10 14994789 14995101 -125321664 - AluJb SINE Alu -30 282 1 269 262 74 0 chr10 14995108 14995230 -125321535 + L2 LINE L2 2202 2332 -982 407 360 80 0 chr10 14995549 14995788 -125320977 + MIR SINE MIR 5 262 0 2244 107 0 7 chr10 14997146 14997456 -125319309 + AluSx SINE Alu 1 308 -4 617 271 43 29 chr10 14997898 14998105 -125318660 + MIR SINE MIR 5 214 -48 235 283 10 50 chr10 14998190 14998289 -125318476 - MIR3 SINE MIR -3 205 111 287 256 70 0 chr10 14998426 14998512 -125318253 - MER91C DNA MER1_type 0 140 49 537 260 132 56 chr10 14998837 14999245 -125317520 + MLT1H LTR MaLR 108 546 -3 2012 105 4 0 chr10 14999466 14999732 -125317033 - AluSg SINE Alu -18 292 26 266 242 0 0 chr10 14999854 14999920 -125316845 - MIR SINE MIR -163 99 34 2061 133 3 19 chr10 15000103 15000420 -125316345 - AluJb SINE Alu 0 312 1 809 313 4 4 chr10 15000958 15001220 -125315545 - MIR SINE MIR 0 262 1 1183 253 56 11 chr10 15001459 15001877 -125314888 - MLT1J LTR MaLR -6 505 12 869 152 0 0 chr10 15002231 15002369 -125314396 + MSTD LTR MaLR 1 138 -258 214 288 9 72 chr10 15002385 15002496 -125314269 - MIR SINE MIR -9 253 150 828 241 15 20 chr10 15002558 15002757 -125314008 + MSTD LTR MaLR 168 365 0 198 0 0 0 chr10 15002972 15002994 -125313771 + (A)n Simple_repeat Simple_repeat 1 22 0 381 277 83 14 chr10 15003178 15003442 -125313323 - L1MC4a LINE L1 -1913 5895 5581 311 297 140 18 chr10 15004493 15004863 -125311902 + L2 LINE L2 2590 3021 -292 539 286 35 52 chr10 15005095 15005382 -125311383 + L2 LINE L2 3031 3312 -1 1746 148 0 38 chr10 15005912 15006203 -125310562 - AluJb SINE Alu -20 292 13 1842 143 4 7 chr10 15006685 15006965 -125309800 + AluSx SINE Alu 1 279 -33 752 131 0 8 chr10 15006969 15007099 -125309666 + (GGGAA)n Simple_repeat Simple_repeat 2 130 0 4764 75 33 8 chr10 15007661 15008297 -125308468 + LTR8 LTR ERV1 1 652 -39 233 278 157 0 chr10 15008390 15008498 -125308267 + L2 LINE L2 2607 2731 -583 2384 78 3 0 chr10 15008557 15008850 -125307915 + AluSp SINE Alu 5 298 -15 2179 153 44 33 chr10 15008883 15009428 -125307337 + MLT2A2 LTR ERVL 1 554 0 354 248 90 55 chr10 15009798 15009856 -125306909 + L2 LINE L2 3121 3176 -96 3704 144 41 3 chr10 15009856 15010468 -125306297 + MER41B LTR ERV1 1 635 0 354 248 90 55 chr10 15010468 15010554 -125306211 + L2 LINE L2 3176 3270 -2 2948 137 23 19 chr10 15010634 15011117 -125305648 - LTR45B LTR ERV1 -2 487 3 1916 197 53 14 chr10 15012041 15012472 -125304293 + LTR65 LTR ERV1 165 612 -57 2088 112 3 11 chr10 15012473 15012759 -125304006 + AluSx SINE Alu 1 284 -28 290 310 218 5 chr10 15012958 15013174 -125303591 + MIR SINE MIR 1 262 0 1757 241 102 12 chr10 15013357 15013991 -125302774 + L2 LINE L2 2380 3120 -193 312 91 0 0 chr10 15013991 15014035 -125302730 + (CA)n Simple_repeat Simple_repeat 1 44 0 1757 241 102 12 chr10 15014035 15014249 -125302516 + L2 LINE L2 3120 3313 0 751 235 38 6 chr10 15014644 15014827 -125301938 + MER5A DNA MER1_type 1 189 0 1931 162 0 3 chr10 15014908 15015217 -125301548 + AluJo SINE Alu 1 308 -4 2155 135 3 0 chr10 15015840 15016151 -125300614 + AluSx SINE Alu 1 312 0 4487 176 40 12 chr10 15016240 15017121 -125299644 + L1MB3 LINE L1 5278 6180 -3 321 316 97 13 chr10 15017166 15017321 -125299444 + L2 LINE L2 2816 2983 -289 388 210 183 124 chr10 15017351 15017774 -125298991 + MLT1J2 LTR MaLR 1 438 -8 301 288 160 56 chr10 15017786 15018036 -125298729 + L2 LINE L2 3038 3313 0 280 338 108 0 chr10 15018468 15018607 -125298158 + MIR3 SINE MIR 10 163 -45 1523 182 70 3 chr10 15018686 15018988 -125297777 + MER33 DNA MER1_type 1 322 -2 2176 108 0 26 chr10 15019302 15019609 -125297156 + AluSc SINE Alu 1 299 -10 1845 122 0 11 chr10 15019722 15019992 -125296773 - AluSx SINE Alu 0 312 46 4392 84 56 25 chr10 15019992 15020584 -125296181 + LTR66 LTR ERVL 1 610 0 416 41 0 0 chr10 15020584 15020633 -125296132 - AluSx SINE Alu -263 50 2 350 244 12 0 chr10 15020796 15020878 -125295887 + MER5A DNA MER1_type 9 91 -98 9490 110 9 3 chr10 15021067 15022342 -125294423 + HSMAR1 DNA Mariner 1 1283 -4 369 338 62 29 chr10 15022770 15022980 -125293785 + L2 LINE L2 3097 3313 0 2208 108 0 10 chr10 15023895 15024192 -125292573 + AluSx SINE Alu 7 300 -12 1715 78 74 47 chr10 15024245 15024501 -125292264 - AluSc SINE Alu -9 300 38 241 271 74 138 chr10 15025321 15025524 -125291241 + L2 LINE L2 3029 3218 -54 189 0 0 0 chr10 15026110 15026131 -125290634 + (CATATA)n Simple_repeat Simple_repeat 6 26 0 1133 149 56 19 chr10 15026505 15026719 -125290046 + MLT2B1 LTR ERVL 1 222 -298 836 145 0 29 chr10 15026719 15026857 -125289908 - FLAM_C SINE Alu -9 134 1 1219 233 19 22 chr10 15026858 15027129 -125289636 + MLT2B3 LTR ERVL 226 495 -59 546 29 0 0 chr10 15027129 15027197 -125289568 + (TCTA)n Simple_repeat Simple_repeat 2 69 0 1949 159 3 0 chr10 15027355 15027656 -125289109 - AluSx SINE Alu -10 302 1 420 89 0 0 chr10 15028184 15028240 -125288525 + MADE1 DNA Mariner 25 80 0 2013 113 0 17 chr10 15028406 15028699 -125288066 - AluSx SINE Alu -3 309 22 180 0 0 0 chr10 15029637 15029657 -125287108 + (A)n Simple_repeat Simple_repeat 1 20 0 26 0 0 0 chr10 15029889 15029915 -125286850 + AT_rich Low_complexity Low_complexity 1 26 0 225 359 33 22 chr10 15030087 15030179 -125286586 - MIR SINE MIR -81 127 35 2386 135 27 40 chr10 15030272 15030539 -125286226 + L1MA2 LINE L1 5865 6125 -179 2121 113 3 10 chr10 15030539 15030832 -125285933 - AluSc SINE Alu -18 291 1 2386 135 27 40 chr10 15030832 15031008 -125285757 + L1MA2 LINE L1 6125 6302 -2 803 178 108 0 chr10 15031417 15031574 -125285191 + AluJo SINE Alu 14 187 -125 490 222 0 0 chr10 15031590 15031671 -125285094 + FLAM_A SINE Alu 5 85 -57 193 280 0 20 chr10 15031950 15032000 -125284765 + MIR SINE MIR 54 102 -106 1779 237 40 9 chr10 15032783 15033231 -125283534 + MLT1C LTR MaLR 6 467 0 271 277 88 19 chr10 15033232 15033391 -125283374 + L2 LINE L2 2221 2390 -924 334 295 72 47 chr10 15033470 15033748 -125283017 + L2 LINE L2 2583 2867 -447 23 0 0 0 chr10 15034046 15034069 -125282696 + AT_rich Low_complexity Low_complexity 1 23 0 3292 68 53 0 chr10 15034070 15034483 -125282282 - L1PA8 LINE L1 -15 6157 5723 192 308 173 10 chr10 15034492 15034596 -125282169 + L2 LINE L2 3139 3259 -13 317 24 24 0 chr10 15034596 15034638 -125282127 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 905 255 166 28 chr10 15034877 15035305 -125281460 + MLT1D LTR MaLR 18 504 -1 647 271 17 0 chr10 15035471 15035648 -125281117 - MIR SINE MIR -16 246 67 580 246 142 24 chr10 15036670 15036881 -125279884 - MIR SINE MIR -12 250 15 826 150 0 0 chr10 15038253 15038373 -125278392 - AluSg/x SINE Alu -26 284 165 368 287 0 66 chr10 15038462 15038598 -125278167 - MIR SINE MIR -110 152 26 2353 109 0 3 chr10 15038739 15039052 -125277713 - AluSx SINE Alu 0 312 1 4301 89 13 2 chr10 15039827 15040375 -125276390 + MER41A LTR ERV1 1 554 0 1745 162 7 36 chr10 15041090 15041393 -125275372 - AluJo SINE Alu -18 294 1 1893 158 0 7 chr10 15041677 15041974 -125274791 + AluSx SINE Alu 9 303 -9 894 140 18 0 chr10 15041977 15042200 -125274565 + GA-rich Low_complexity Low_complexity 1 227 0 780 154 0 0 chr10 15042203 15042333 -125274432 - L1ME LINE L1 -714 5452 5323 349 172 12 68 chr10 15042333 15042496 -125274269 + GA-rich Low_complexity Low_complexity 4 157 0 17728 58 58 6 chr10 15042688 15045003 -125271762 + L1P LINE L1 3 2437 -3709 269 361 12 0 chr10 15045496 15045579 -125271186 - MIR SINE MIR -105 103 20 182 375 0 0 chr10 15047136 15047184 -125269581 + L3b LINE CR1 1500 1547 -36 759 198 16 105 chr10 15048326 15048574 -125268191 - LTR12 LTR ERV1 -251 463 238 1674 185 17 8 chr10 15048917 15049271 -125267494 - MSTA LTR MaLR 0 428 1 8343 183 57 7 chr10 15049271 15050763 -125266002 - MSTA-int LTR MaLR 0 1651 75 1827 154 54 40 chr10 15050763 15051133 -125265632 + THE1C LTR MaLR 1 375 0 8343 183 57 7 chr10 15051133 15051212 -125265553 - MSTA-int LTR MaLR -1576 75 1 2355 163 17 22 chr10 15051212 15051617 -125265148 - MSTA LTR MaLR 0 428 26 602 360 51 25 chr10 15051627 15052097 -125264668 + ERVL LTR ERVL 2034 2515 -3249 606 167 4 224 chr10 15052134 15052397 -125264368 + L1MA9 LINE L1 5414 5618 -550 4133 152 18 24 chr10 15052497 15053285 -125263480 - L1MA2 LINE L1 -360 5944 5171 1800 168 30 3 chr10 15053285 15053582 -125263183 - AluSx SINE Alu -7 305 1 4133 152 18 24 chr10 15053582 15054034 -125262731 - L1MA2 LINE L1 -1133 5171 4718 3610 123 35 46 chr10 15054034 15054660 -125262105 + L1PB3 LINE L1 5534 6153 -1 773 247 6 11 chr10 15054857 15055061 -125261704 + MLT1F1 LTR MaLR 305 497 -45 1918 213 60 2 chr10 15055436 15055853 -125260912 - MER67C LTR ERV1 -63 647 207 1587 180 37 94 chr10 15055962 15056367 -125260398 + MLT1B LTR MaLR 7 388 -2 21 36 0 0 chr10 15056554 15056582 -125260183 + AT_rich Low_complexity Low_complexity 1 28 0 249 290 65 0 chr10 15056998 15057091 -125259674 + MIR SINE MIR 120 218 -44 2031 98 0 38 chr10 15057313 15057600 -125259165 + AluSx SINE Alu 29 304 -8 2130 168 19 3 chr10 15060178 15060608 -125256157 + L1MA9 LINE L1 5703 6161 -130 208 305 0 49 chr10 15060608 15060638 -125256127 + GA-rich Low_complexity Low_complexity 1 31 -47 1538 122 22 0 chr10 15060638 15060868 -125255897 + L1MA2 LINE L1 6070 6304 0 208 305 0 49 chr10 15060868 15060919 -125255846 + GA-rich Low_complexity Low_complexity 31 78 0 608 110 0 10 chr10 15060919 15061019 -125255746 + (GGGA)n Simple_repeat Simple_repeat 3 101 0 1035 92 0 0 chr10 15061019 15061160 -125255605 + L1MA9 LINE L1 6171 6311 -1 1115 186 39 10 chr10 15061223 15061427 -125255338 - MER6B DNA MER2_type 0 210 1 2223 106 0 37 chr10 15061892 15062213 -125254552 - AluSc SINE Alu 0 309 1 4236 97 13 2 chr10 15062382 15062929 -125253836 + MER41A LTR ERV1 2 554 0 4985 135 35 5 chr10 15063684 15064438 -125252327 - MER4E LTR ERV1 -3 776 1 4052 98 29 29 chr10 15064995 15065549 -125251216 + MER41A LTR ERV1 1 554 0 31 0 0 0 chr10 15065869 15065900 -125250865 + AT_rich Low_complexity Low_complexity 1 31 0 2609 37 7 0 chr10 15066215 15066512 -125250253 + L1PA3 LINE L1 5854 6152 -3 33 25 0 0 chr10 15066512 15066552 -125250213 + AT_rich Low_complexity Low_complexity 1 40 0 2857 212 30 58 chr10 15067049 15067911 -125248854 + L1MC4 LINE L1 7202 8039 -3 1773 288 36 23 chr10 15068619 15069022 -125247743 + L2 LINE L2 2312 2734 -579 2418 161 0 20 chr10 15069022 15069420 -125247345 - MLT1B LTR MaLR 0 390 1 1773 288 36 23 chr10 15069420 15069769 -125246996 + L2 LINE L2 2734 3077 -236 1614 171 84 10 chr10 15069784 15070093 -125246672 + MER61A LTR ERV1 1 332 -11 563 286 27 45 chr10 15070106 15070330 -125246435 + L2 LINE L2 3094 3313 0 21 0 0 0 chr10 15070583 15070604 -125246161 + AT_rich Low_complexity Low_complexity 1 21 0 2392 79 3 0 chr10 15070611 15070903 -125245862 + AluSp SINE Alu 3 295 -18 395 212 74 74 chr10 15070918 15071107 -125245658 - HAL1 LINE L1 0 2507 2319 391 228 26 61 chr10 15071120 15071234 -125245531 - MER104 DNA Tc2 -70 110 1 235 210 111 49 chr10 15072074 15072155 -125244610 - MLT1I LTR MaLR 0 409 324 302 195 85 14 chr10 15072302 15072399 -125244366 - MLT1J2 LTR MaLR -285 161 46 2623 40 0 3 chr10 15072421 15072724 -125244041 + AluY SINE Alu 1 302 -9 228 320 53 0 chr10 15072830 15072905 -125243860 + L2 LINE L2 3235 3313 0 408 324 7 14 chr10 15072908 15073047 -125243718 - MLT1L LTR MaLR -458 157 20 192 77 0 0 chr10 15073092 15073118 -125243647 + (TGGA)n Simple_repeat Simple_repeat 2 27 0 240 334 71 53 chr10 15073153 15073476 -125243289 + L2 LINE L2 2557 2885 -429 181 345 23 35 chr10 15073552 15073639 -125243126 + L2 LINE L2 3017 3102 -170 4117 109 11 0 chr10 15073771 15074319 -125242446 + MER41A LTR ERV1 1 554 0 210 191 24 0 chr10 15074397 15074439 -125242326 - L2 LINE L2 -5 3308 3266 263 239 9 101 chr10 15076386 15076495 -125240270 + L2 LINE L2 3215 3313 0 225 147 221 59 chr10 15076644 15076672 -125240093 + L1ME3 LINE L1 6054 6076 -86 279 71 0 0 chr10 15076672 15076714 -125240051 + (CA)n Simple_repeat Simple_repeat 2 43 0 225 147 221 59 chr10 15076714 15076753 -125240012 + L1ME3 LINE L1 6076 6132 -30 3008 176 51 7 chr10 15077508 15078081 -125238684 + L1MA4 LINE L1 5700 6297 -3 357 171 53 26 chr10 15079149 15079225 -125237540 - L1MA6 LINE L1 -7 6293 6216 602 236 44 35 chr10 15079768 15079978 -125236787 - MER20B DNA MER1_type -1 218 3 2676 146 53 5 chr10 15080370 15080782 -125235983 + MSTB1 LTR MaLR 1 432 0 551 314 36 32 chr10 15080969 15081217 -125235548 + L2 LINE L2 2930 3178 -135 531 217 47 16 chr10 15081842 15081971 -125234794 - L2 LINE L2 -6 3307 3175 2214 109 6 16 chr10 15082058 15082371 -125234394 + AluSx SINE Alu 1 310 -2 570 188 10 0 chr10 15083786 15083887 -125232878 - MER45A DNA AcHobo 0 178 77 1808 162 30 3 chr10 15083964 15084304 -125232461 - AluSx SINE Alu 0 348 1 370 98 0 0 chr10 15084680 15084731 -125232034 - MADE1 DNA Mariner 0 80 30 735 178 0 86 chr10 15084735 15084887 -125231878 + FRAM SINE Alu 20 158 -18 2069 119 0 53 chr10 15084976 15085294 -125231471 - AluSx SINE Alu -9 303 3 663 107 0 0 chr10 15086708 15086792 -125229973 + AluS SINE Alu 1 84 -229 434 91 197 0 chr10 15087401 15087467 -125229298 - MADE1 DNA Mariner -1 79 1 926 94 31 0 chr10 15087504 15087632 -125229133 + L1PA5 LINE L1 6017 6148 -6 264 59 0 0 chr10 15087729 15087763 -125229002 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 182 371 51 17 chr10 15087763 15087941 -125228824 - L2 LINE L2 -12 3301 3118 1848 127 0 80 chr10 15088078 15088416 -125228349 + AluSx SINE Alu 2 312 0 2970 234 170 25 chr10 15088428 15088574 -125228191 + L1ME LINE L1 3562 3686 -2460 1525 208 154 40 chr10 15088574 15089027 -125227738 + MLT1D LTR MaLR 1 505 0 2970 234 170 25 chr10 15089027 15090141 -125226624 + L1ME LINE L1 3686 5004 -1142 218 111 37 56 chr10 15090141 15090249 -125226516 + (TA)n Simple_repeat Simple_repeat 1 106 0 253 97 43 65 chr10 15090264 15090357 -125226408 + (TA)n Simple_repeat Simple_repeat 2 92 0 861 137 0 0 chr10 15090458 15090582 -125226183 + AluJb SINE Alu 1 124 -188 1025 195 0 0 chr10 15090655 15090824 -125225941 + AluJb SINE Alu 129 297 -15 805 255 69 31 chr10 15090825 15091243 -125225522 + L1ME LINE L1 5200 5637 -525 488 223 137 29 chr10 15091243 15091418 -125225347 - L1M4 LINE L1 -1876 4270 4077 643 283 123 35 chr10 15091822 15092588 -125224177 + L1ME LINE L1 4888 5729 -433 2167 102 0 14 chr10 15092704 15093029 -125223736 - AluSc SINE Alu 0 309 1 26 30 0 0 chr10 15093348 15093381 -125223384 + AT_rich Low_complexity Low_complexity 1 33 0 291 278 0 22 chr10 15095303 15095437 -125221328 + G-rich Low_complexity Low_complexity 1 131 0 496 328 6 6 chr10 15095667 15095847 -125220918 + (CA)n Simple_repeat Simple_repeat 1 180 0 301 308 8 23 chr10 15095817 15095947 -125220818 + (CATA)n Simple_repeat Simple_repeat 1 128 0 * 247 299 10 0 chr10 15095953 15096202 -125220563 + (CA)n Simple_repeat Simple_repeat 1 251 0 330 274 19 0 chr10 15096348 15096505 -125220260 + (CA)n Simple_repeat Simple_repeat 1 160 0 338 237 0 9 chr10 15096532 15096646 -125220119 + (CA)n Simple_repeat Simple_repeat 1 113 0 382 233 0 0 chr10 15097074 15097147 -125219618 + MER82 DNA MER2_type 14 86 -567 267 190 116 66 chr10 15097190 15097311 -125219454 - MIR3 SINE MIR -78 130 4 1063 110 12 13 chr10 15097649 15097831 -125218934 + L1P4 LINE L1 5346 5518 -646 * 2005 181 3 18 chr10 15097823 15098193 -125218572 + L1MA2 LINE L1 4885 5250 -896 2735 100 0 14 chr10 15098193 15098553 -125218212 + THE1A LTR MaLR 1 355 0 2005 181 3 18 chr10 15098553 15098574 -125218191 + L1MA2 LINE L1 5250 5270 -876 4885 107 14 17 chr10 15098710 15099433 -125217332 + L1MA2 LINE L1 5583 6303 -1 3463 50 29 7 chr10 15099449 15099870 -125216895 + L1PA8 LINE L1 5743 6172 0 214 333 0 0 chr10 15100279 15100336 -125216429 + L2 LINE L2 3254 3310 -3 234 175 35 0 chr10 15101502 15101559 -125215206 + L2 LINE L2 2561 2619 -695 731 197 34 48 chr10 15101597 15101805 -125214960 - MER96B DNA MER1_type? -21 396 192 2157 130 3 0 chr10 15101835 15102143 -125214622 - AluSx SINE Alu -3 309 1 667 199 28 39 chr10 15102602 15102783 -125213982 + MER96B DNA MER1_type? 192 370 -47 502 217 130 25 chr10 15102650 15102811 -125213954 - MER96B DNA MER1_type? -238 179 2 * 318 340 94 20 chr10 15102825 15103028 -125213737 + L2 LINE L2 2667 2884 -430 1834 258 4 37 chr10 15103176 15103638 -125213127 + LTR2 LTR ERV1 3 449 0 1608 196 48 18 chr10 15103641 15103978 -125212787 + MLT2C1 LTR ERVL 3 349 -48 387 60 0 0 chr10 15104043 15104093 -125212672 - MADE1 DNA Mariner -30 50 1 453 208 9 19 chr10 15104168 15104274 -125212491 + L2 LINE L2 3137 3241 -31 766 296 142 13 chr10 15104530 15104738 -125212027 + L2 LINE L2 2611 2791 -522 2387 122 30 25 chr10 15104738 15105099 -125211666 + THE1B LTR MaLR 1 363 -1 766 296 142 13 chr10 15105099 15105527 -125211238 + L2 LINE L2 2791 3312 -1 1795 169 3 17 chr10 15106049 15106344 -125210421 - AluJo SINE Alu -21 291 1 2128 135 3 0 chr10 15106955 15107259 -125209506 + AluSq SINE Alu 1 305 -8 206 345 53 0 chr10 15107404 15107517 -125209248 - L2 LINE L2 -1401 1913 1795 840 243 44 44 chr10 15108126 15108503 -125208262 + L1MEd LINE L1 2393 2759 -4806 442 282 30 79 chr10 15108661 15108701 -125208064 + MIR SINE MIR 2 42 -220 2674 118 14 16 chr10 15108701 15109066 -125207699 - THE1B LTR MaLR 0 364 1 442 282 30 79 chr10 15109066 15109268 -125207497 + MIR SINE MIR 42 232 -30 3070 113 19 9 chr10 15109268 15109692 -125207073 - MSTA LTR MaLR 0 428 1 442 282 30 79 chr10 15109692 15109714 -125207051 + MIR SINE MIR 232 254 -8 1964 116 0 8 chr10 15110251 15110518 -125206247 - AluSp SINE Alu -14 299 35 2238 102 0 7 chr10 15110634 15110927 -125205838 - AluSc SINE Alu -18 291 1 375 224 87 40 chr10 15111133 15111278 -125205487 + L1MEd LINE L1 2878 2999 -4566 1739 167 25 3 chr10 15111332 15111614 -125205151 - AluJb SINE Alu -22 290 3 498 235 159 72 chr10 15111922 15112096 -125204669 + L1ME4a LINE L1 5635 5792 -329 1952 126 19 50 chr10 15112096 15112414 -125204351 + AluSx SINE Alu 1 308 -4 498 235 159 72 chr10 15112414 15112686 -125204079 + L1ME4a LINE L1 5792 6120 -1 2159 93 4 0 chr10 15114119 15114397 -125202368 + AluSq SINE Alu 31 309 -4 200 271 0 0 chr10 15114440 15114488 -125202277 + (CA)n Simple_repeat Simple_repeat 1 48 0 272 286 71 50 chr10 15116393 15116435 -125200330 - MIR SINE MIR -118 144 104 1888 210 39 80 chr10 15116435 15117073 -125199692 + LTR9 LTR ERV1 1 612 0 272 286 71 50 chr10 15117073 15117170 -125199595 - MIR SINE MIR -158 104 2 1897 258 32 28 chr10 15117384 15117986 -125198779 + L1MD3 LINE L1 7380 7983 -12 2180 115 3 3 chr10 15117990 15118295 -125198470 - AluSg SINE Alu -5 305 1 1732 157 16 63 chr10 15118411 15118775 -125197990 + MER7A DNA MER2_type 1 345 -1 360 0 0 0 chr10 15119078 15119118 -125197647 + (CA)n Simple_repeat Simple_repeat 2 41 0 433 171 12 0 chr10 15120065 15120147 -125196618 - L1MB3 LINE L1 -7 6176 6094 273 204 204 38 chr10 15120151 15120247 -125196518 - MER5C DNA MER1_type -68 256 177 1956 137 0 11 chr10 15120247 15120552 -125196213 + AluSx SINE Alu 1 302 0 273 204 204 38 chr10 15120552 15120640 -125196125 - MER5C DNA MER1_type -147 177 40 432 226 120 69 chr10 15120930 15121052 -125195713 + MLT1F LTR MaLR 1 115 -440 2335 112 0 0 chr10 15121052 15121357 -125195408 + AluSx SINE Alu 1 305 -7 432 226 120 69 chr10 15121357 15121484 -125195281 + MLT1F LTR MaLR 115 262 -293 203 250 0 0 chr10 15121503 15121555 -125195210 + GA-rich Low_complexity Low_complexity 2 53 0 395 257 28 18 chr10 15121565 15121674 -125195091 + MLT1F LTR MaLR 393 502 -88 2028 164 33 39 chr10 15121680 15122011 -125194754 + MLT1B LTR MaLR 3 333 -57 3692 120 0 15 chr10 15122011 15122543 -125194222 + MER1A DNA MER1_type 1 524 -3 2028 164 33 39 chr10 15122543 15122601 -125194164 + MLT1B LTR MaLR 333 390 0 390 127 0 76 chr10 15122603 15122682 -125194083 + MLT1G1 LTR MaLR 494 588 -1 1161 172 39 10 chr10 15123905 15124109 -125192656 + AluJb SINE Alu 1 210 -102 201 176 0 0 chr10 15124131 15124165 -125192600 + A-rich Low_complexity Low_complexity 1 34 0 370 309 164 30 chr10 15124412 15124716 -125192049 + MER115 DNA AcHobo 3 347 -346 924 132 23 40 chr10 15125833 15126007 -125190758 + FRAM SINE Alu 6 176 0 1277 142 19 69 chr10 15126059 15126286 -125190479 - THE1C LTR MaLR 0 375 161 2048 123 7 29 chr10 15126286 15126594 -125190171 + AluSx SINE Alu 1 301 -11 1277 142 19 69 chr10 15126594 15126627 -125190138 - THE1C LTR MaLR -214 161 128 274 330 215 0 chr10 15127070 15127279 -125189486 - MIR SINE MIR -3 259 6 2200 111 16 7 chr10 15128818 15128999 -125187766 - AluSx SINE Alu 0 312 125 2148 113 3 25 chr10 15128999 15129318 -125187447 - AluSx SINE Alu 0 312 1 2200 111 16 7 chr10 15129318 15129442 -125187323 - AluSx SINE Alu -187 125 4 1507 143 52 45 chr10 15129689 15129976 -125186789 - AluJo SINE Alu -23 289 1 923 247 92 32 chr10 15129977 15130357 -125186408 - L2 LINE L2 -7 3306 2904 255 264 100 45 chr10 15130357 15130467 -125186298 - MARNA DNA Mariner -26 560 445 2284 182 6 34 chr10 15131022 15131494 -125185271 + MER65C LTR ERV1 2 460 -1 5453 146 21 12 chr10 15132187 15133104 -125183661 - L1MC1 LINE L1 -6 6327 5403 254 268 165 0 chr10 15133234 15133331 -125183434 - L2 LINE L2 0 3272 3160 291 371 86 0 chr10 15133423 15133620 -125183145 + L2 LINE L2 2943 3156 -157 2020 184 93 18 chr10 15133718 15134170 -125182595 - MER66B LTR ERV1 0 486 1 1689 255 88 21 chr10 15134170 15134718 -125182047 - HsTC2 DNA Tc2 -1310 588 1 269 246 44 79 chr10 15134730 15134844 -125181921 + L2 LINE L2 3171 3280 -33 274 214 67 22 chr10 15134852 15134941 -125181824 + HsTC2 DNA Tc2 360 452 -1446 * 3382 139 6 19 chr10 15134925 15135296 -125181469 + MER49 LTR ERV1 26 389 -534 2347 85 0 0 chr10 15135296 15135591 -125181174 + AluSq SINE Alu 1 295 -18 3382 139 6 19 chr10 15135591 15135751 -125181014 + MER49 LTR ERV1 389 550 -373 309 151 0 0 chr10 15135769 15135822 -125180943 + GA-rich Low_complexity Low_complexity 4 56 0 1249 180 69 114 chr10 15135873 15136258 -125180507 + MER49 LTR ERV1 334 923 0 640 157 26 13 chr10 15136640 15136793 -125179972 + GA-rich Low_complexity Low_complexity 3 157 0 218 237 32 75 chr10 15137665 15137758 -125179007 - L2 LINE L2 -6 3266 3178 316 179 18 0 chr10 15138785 15138841 -125177924 + MLT1E2 LTR MaLR 219 275 -351 428 123 14 0 chr10 15138872 15138945 -125177820 + (CA)n Simple_repeat Simple_repeat 1 74 0 1206 211 68 4 chr10 15138951 15139062 -125177703 + MLT1E2 LTR MaLR 344 446 -180 183 42 0 0 chr10 15139062 15139086 -125177679 + (CAGCC)n Simple_repeat Simple_repeat 1 24 0 1206 211 68 4 chr10 15139086 15139240 -125177525 + MLT1E2 LTR MaLR 446 626 0 2332 115 0 0 chr10 15139245 15139557 -125177208 + AluSx SINE Alu 1 312 0 782 285 35 22 chr10 15139577 15139946 -125176819 - L1ME LINE L1 -528 5636 5263 789 295 128 19 chr10 15139954 15140452 -125176313 - L1ME LINE L1 -1001 5145 4570 378 42 0 0 chr10 15140452 15140500 -125176265 + (CA)n Simple_repeat Simple_repeat 2 49 0 789 295 128 19 chr10 15140500 15140595 -125176170 - L1ME LINE L1 -1576 4570 4487 27 0 0 0 chr10 15140794 15140821 -125175944 + AT_rich Low_complexity Low_complexity 1 27 0 1166 231 33 18 chr10 15140821 15141154 -125175611 - L1MA9 LINE L1 -38 6274 5937 319 75 57 0 chr10 15141183 15141236 -125175529 - L1MC2 LINE L1 0 6344 6289 1628 271 54 57 chr10 15141253 15141511 -125175254 - L1ME LINE L1 -1776 4370 4113 1732 165 33 3 chr10 15141511 15141814 -125174951 + AluJb SINE Alu 1 312 0 1628 271 54 57 chr10 15141814 15142464 -125174301 - L1ME LINE L1 -2033 4113 3465 233 234 0 0 chr10 15143028 15143075 -125173690 - L3 LINE CR1 -4 1573 1527 4489 78 19 0 chr10 15143348 15143931 -125172834 + L1PA10 LINE L1 5556 6152 -16 188 57 0 57 chr10 15143931 15143966 -125172799 + (TTAAA)n Simple_repeat Simple_repeat 3 35 0 196 236 28 28 chr10 15144477 15144549 -125172216 + MIR3 SINE MIR 2 73 -135 846 50 0 0 chr10 15144549 15144650 -125172115 - AluY SINE Alu -7 304 204 441 262 89 48 chr10 15144650 15144818 -125171947 + MIR SINE MIR 67 241 -21 208 239 0 0 chr10 15145076 15145122 -125171643 + (TG)n Simple_repeat Simple_repeat 1 46 0 228 132 57 94 chr10 15145513 15145566 -125171199 - AluJo SINE Alu -166 136 86 1292 157 0 68 chr10 15145566 15145802 -125170963 - AluJo SINE Alu -92 220 1 267 67 0 67 chr10 15146348 15146393 -125170372 - L2 LINE L2 -6 3307 3266 2386 72 0 26 chr10 15146678 15146982 -125169783 + AluSq SINE Alu 1 296 -17 498 291 58 54 chr10 15147216 15147264 -125169501 - MIR SINE MIR -1 261 215 1865 137 3 14 chr10 15147264 15147548 -125169217 - AluJb SINE Alu -20 292 12 498 291 58 54 chr10 15147548 15147613 -125169152 - MIR SINE MIR -47 215 152 2048 157 0 0 chr10 15147613 15147918 -125168847 - AluSx SINE Alu -7 305 1 498 291 58 54 chr10 15147918 15148044 -125168721 - MIR SINE MIR -110 152 20 21 0 0 0 chr10 15149787 15149808 -125166957 + AT_rich Low_complexity Low_complexity 1 21 0 5479 154 36 95 chr10 15150420 15151067 -125165698 - L1 LINE L1 -1535 4611 3927 282 216 20 0 chr10 15151067 15151118 -125165647 - MER66B LTR ERV1 -140 346 295 5479 154 36 95 chr10 15151118 15151565 -125165200 - L1 LINE L1 -2219 3927 3553 1211 159 195 16 chr10 15151565 15151816 -125164949 - AluJo SINE Alu -16 296 1 5479 154 36 95 chr10 15151816 15151986 -125164779 - L1 LINE L1 -2593 3553 3374 346 336 0 9 chr10 15152282 15152389 -125164376 + MIR SINE MIR 1 106 -156 * 384 302 79 0 chr10 15152384 15152523 -125164242 - L2 LINE L2 0 3313 3164 603 323 142 6 chr10 15152709 15153195 -125163570 - L2 LINE L2 -412 2902 2351 1411 193 39 8 chr10 15153196 15153455 -125163310 + Tigger7 DNA MER2_type 1 267 -2220 574 182 10 0 chr10 15153452 15153551 -125163214 + Tigger7 DNA MER2_type 2392 2491 0 * 362 341 0 0 chr10 15153551 15153689 -125163076 + MIR SINE MIR 101 238 -24 272 319 22 11 chr10 15153825 15153916 -125162849 + L2 LINE L2 3134 3225 -47 2281 103 0 7 chr10 15154939 15155241 -125161524 - AluSx SINE Alu -12 300 1 1753 147 35 0 chr10 15156272 15156557 -125160208 + AluJb SINE Alu 1 295 -17 264 250 47 61 chr10 15156614 15156762 -125160003 - L1ME4a LINE L1 -96 6025 5880 245 202 34 67 chr10 15156950 15157039 -125159726 - L1MA5 LINE L1 0 6300 6215 315 241 83 88 chr10 15157050 15157169 -125159596 - L1ME4a LINE L1 -303 5818 5699 628 163 0 131 chr10 15157169 15157322 -125159443 - FLAM_A SINE Alu 0 133 1 315 241 83 88 chr10 15157322 15157430 -125159335 - L1ME4a LINE L1 -422 5699 5592 2000 231 27 19 chr10 15157434 15158110 -125158655 - L1MB7 LINE L1 -321 5863 5307 407 368 76 21 chr10 15158204 15158625 -125158140 - L1MB7 LINE L1 -978 5168 4725 237 176 122 137 chr10 15158780 15158911 -125157854 + L1MC4 LINE L1 6700 6828 -1214 189 0 0 0 chr10 15158939 15158960 -125157805 + (A)n Simple_repeat Simple_repeat 1 21 0 1876 145 0 39 chr10 15159386 15159697 -125157068 + AluJb SINE Alu 1 299 -13 4156 25 0 0 chr10 15160300 15160782 -125155983 - L1PA3 LINE L1 -2066 4080 3599 11108 30 0 2 chr10 15160782 15162856 -125153909 + L1PA3 LINE L1 4086 6152 -3 1706 165 29 0 chr10 15162924 15163203 -125153562 + AluJo SINE Alu 1 287 -25 628 262 147 39 chr10 15163514 15163650 -125153115 + L1MC4 LINE L1 6459 6579 -1463 2347 105 0 7 chr10 15163650 15163954 -125152811 - AluSx SINE Alu -10 302 1 628 262 147 39 chr10 15163954 15164096 -125152669 + L1MC4 LINE L1 6579 6767 -1275 387 0 0 0 chr10 15164447 15164490 -125152275 + (CA)n Simple_repeat Simple_repeat 2 44 0 258 32 0 0 chr10 15164489 15164520 -125152245 + (GA)n Simple_repeat Simple_repeat 2 32 0 * 308 358 80 6 chr10 15164553 15164729 -125152036 - MARNA DNA Mariner -91 495 307 221 283 0 0 chr10 15168965 15169025 -125147740 - L2 LINE L2 0 3272 3213 2423 80 0 7 chr10 15169153 15169452 -125147313 - AluSg SINE Alu -13 297 1 1051 146 12 0 chr10 15170606 15170770 -125145995 - AluJb SINE Alu -11 301 136 2175 120 0 3 chr10 15170773 15171081 -125145684 - AluSq SINE Alu -6 307 1 634 272 50 29 chr10 15172400 15172639 -125144126 - L1ME LINE L1 -355 5766 5523 2186 94 0 23 chr10 15172915 15173214 -125143551 - AluSx SINE Alu -20 292 1 2527 68 0 0 chr10 15173579 15173875 -125142890 - AluY SINE Alu -15 296 1 250 318 65 56 chr10 15174856 15174913 -125141852 - MIR SINE MIR -19 243 188 2310 114 0 0 chr10 15174913 15175220 -125141545 - AluSx SINE Alu -5 307 1 250 318 65 56 chr10 15175220 15175376 -125141389 - MIR SINE MIR -74 188 28 290 200 17 23 chr10 15175689 15175779 -125140986 - MIR3 SINE MIR -24 184 96 305 321 83 24 chr10 15177709 15177961 -125138804 + LTR34 LTR ERV1 269 535 -164 1777 150 9 38 chr10 15177976 15178296 -125138469 + AluJo SINE Alu 1 311 -1 1954 137 30 3 chr10 15178298 15178597 -125138168 + AluSx SINE Alu 1 307 -5 235 135 0 96 chr10 15178662 15178714 -125138051 + LTR23 LTR ERV1 342 388 -49 244 270 22 45 chr10 15178956 15179045 -125137720 + L2 LINE L2 3005 3091 -222 949 299 169 8 chr10 15179637 15180228 -125136537 - L2 LINE L2 -341 2973 2288 199 303 45 0 chr10 15181978 15182044 -125134721 + MIR SINE MIR 76 144 -64 292 296 117 52 chr10 15184129 15184296 -125132469 + MIR SINE MIR 18 205 -57 2359 81 10 3 chr10 15184296 15184592 -125132173 + AluSc SINE Alu 2 299 -10 292 296 117 52 chr10 15184592 15184654 -125132111 + MIR SINE MIR 205 262 0 1589 235 46 28 chr10 15184986 15185445 -125131320 + L1ME3A LINE L1 5678 6144 -26 263 332 63 38 chr10 15185549 15185787 -125130978 + MIR SINE MIR 5 248 -14 216 279 77 19 chr10 15187559 15187663 -125129102 - L2 LINE L2 -19 3294 3185 1877 120 13 57 chr10 15188712 15189028 -125127737 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr10 15190427 15190448 -125126317 + AT_rich Low_complexity Low_complexity 1 21 0 678 241 101 51 chr10 15191279 15191566 -125125199 + L1M4 LINE L1 5521 5822 -356 392 266 108 0 chr10 15191678 15191817 -125124948 + MER5A DNA MER1_type 3 156 -33 505 222 90 36 chr10 15191817 15191984 -125124781 - MIR SINE MIR -82 180 5 402 197 9 125 chr10 15192849 15193023 -125123742 - MIR3 SINE MIR -17 191 34 771 281 79 34 chr10 15193622 15193975 -125122790 + MER90 LTR ERV1 246 614 0 202 175 50 0 chr10 15194052 15194092 -125122673 + MIR SINE MIR 103 144 -64 947 166 186 0 chr10 15194217 15194416 -125122349 - MER46A DNA MER2_type 0 236 1 276 152 45 15 chr10 15195388 15195454 -125121311 - MLT1L LTR MaLR -350 265 198 222 118 0 0 chr10 15195552 15195586 -125121179 + (CA)n Simple_repeat Simple_repeat 2 35 0 1663 126 66 102 chr10 15195587 15195968 -125120797 + MLT1A2 LTR MaLR 8 374 0 216 0 0 0 chr10 15197917 15197941 -125118824 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1822 83 13 0 chr10 15197953 15198183 -125118582 - AluSx SINE Alu -79 233 1 424 249 46 83 chr10 15199175 15199293 -125117472 + MER112 DNA MER1_type 51 159 -101 1734 141 61 7 chr10 15199293 15199570 -125117195 + AluSx SINE Alu 1 292 -20 424 249 46 83 chr10 15199570 15199668 -125117097 + MER112 DNA MER1_type 159 259 -1 269 220 30 100 chr10 15200589 15200689 -125116076 - MIR SINE MIR -139 123 31 288 0 0 0 chr10 15202633 15202665 -125114100 + (CA)n Simple_repeat Simple_repeat 2 33 0 260 256 52 59 chr10 15203575 15203775 -125112990 + L2 LINE L2 2776 2973 -299 467 286 82 15 chr10 15204385 15204591 -125112174 - MIR SINE MIR -10 252 33 339 272 0 0 chr10 15204927 15205052 -125111713 + (CA)n Simple_repeat Simple_repeat 1 125 0 243 208 0 19 chr10 15205790 15205843 -125110922 - MER5B DNA MER1_type -2 176 125 2161 61 41 41 chr10 15206311 15206606 -125110159 - AluY SINE Alu -16 295 1 688 274 117 6 chr10 15207885 15208235 -125108530 - L2 LINE L2 -3 3310 2922 2264 112 0 3 chr10 15208519 15208823 -125107942 - AluSx SINE Alu -9 303 1 332 228 158 0 chr10 15210017 15210144 -125106621 - L1ME4a LINE L1 0 6121 5975 244 216 167 29 chr10 15210206 15210308 -125106457 - L1ME4a LINE L1 -251 5870 5755 2217 159 39 127 chr10 15210312 15210959 -125105806 + Charlie1 DNA MER1_type 2168 2757 -4 30 27 0 0 chr10 15211270 15211307 -125105458 + AT_rich Low_complexity Low_complexity 1 37 0 880 131 0 0 chr10 15211705 15211827 -125104938 + FLAM_A SINE Alu 1 122 -11 293 185 104 111 chr10 15211869 15212004 -125104761 - L2 LINE L2 0 3313 3180 850 182 79 0 chr10 15212751 15212916 -125103849 + MER45A DNA AcHobo 1 178 0 440 83 17 0 chr10 15213056 15213116 -125103649 + MLT1E LTR MaLR 92 152 -441 1045 251 18 11 chr10 15213172 15213451 -125103314 + MLT1E LTR MaLR 313 593 0 2313 70 0 7 chr10 15213636 15213954 -125102811 + AluY SINE Alu 1 316 0 194 289 105 67 chr10 15214129 15214368 -125102397 - L2 LINE L2 -1926 1388 1141 324 163 0 0 chr10 15214631 15214680 -125102085 - MER81 DNA DNA -36 78 30 183 197 49 16 chr10 15214746 15214807 -125101958 - MER5B DNA MER1_type -3 175 113 220 309 124 14 chr10 15214814 15215096 -125101669 - L2 LINE L2 -2666 648 336 214 262 0 0 chr10 15216160 15216202 -125100563 + (CATG)n Simple_repeat Simple_repeat 3 44 0 336 24 0 0 chr10 15216996 15217037 -125099728 + (TG)n Simple_repeat Simple_repeat 1 41 0 2249 119 0 0 chr10 15217286 15217581 -125099184 + AluSx SINE Alu 1 295 -17 1400 172 92 43 chr10 15217725 15218073 -125098692 - MLT1A1 LTR MaLR 0 365 1 916 165 95 0 chr10 15219346 15219504 -125097261 + FAM SINE Alu 3 175 0 246 171 26 13 chr10 15219506 15219582 -125097183 + (TA)n Simple_repeat Simple_repeat 1 77 0 233 200 27 67 chr10 15219607 15219682 -125097083 + MIR SINE MIR 42 113 -95 1519 128 210 55 chr10 15219948 15220211 -125096554 + MSTD LTR MaLR 1 331 -65 1682 140 37 57 chr10 15220211 15220511 -125096254 + AluSx SINE Alu 1 294 -18 1519 128 210 55 chr10 15220511 15220590 -125096175 + MSTD LTR MaLR 331 396 0 2229 121 3 0 chr10 15221964 15222269 -125094496 - AluSx SINE Alu -6 306 1 233 271 135 0 chr10 15222423 15222519 -125094246 + MER112 DNA MER1_type 6 114 -146 1829 157 32 23 chr10 15222607 15222952 -125093813 + L1MB3 LINE L1 5748 6095 -88 2005 125 0 0 chr10 15223013 15223319 -125093446 + AluSg SINE Alu 1 306 0 1902 140 21 0 chr10 15226522 15226801 -125089964 + AluSx SINE Alu 13 297 -15 2290 96 0 3 chr10 15226844 15227136 -125089629 + AluY SINE Alu 1 291 -20 209 261 8 67 chr10 15228041 15228160 -125088605 - L2 LINE L2 -329 2943 2832 1662 193 0 22 chr10 15228385 15228701 -125088064 + AluJo SINE Alu 1 309 -3 2478 83 0 3 chr10 15229131 15229443 -125087322 - AluY SINE Alu 0 311 1 240 271 271 8 chr10 15229519 15229571 -125087194 - MIR SINE MIR -87 175 138 2249 122 0 3 chr10 15229571 15229883 -125086882 + AluSx SINE Alu 2 312 0 240 271 271 8 chr10 15229883 15229948 -125086817 - MIR SINE MIR -124 138 27 4577 94 8 17 chr10 15231416 15232056 -125084709 + MER51A LTR ERV1 1 634 0 231 319 118 0 chr10 15232596 15232715 -125084050 + MER94 DNA DNA 1 133 -1 1700 173 33 36 chr10 15233164 15233529 -125083236 + MLT1A1 LTR MaLR 2 365 0 268 295 129 0 chr10 15234554 15234693 -125082072 + MIR3 SINE MIR 42 198 -10 2154 120 27 0 chr10 15235666 15235967 -125080798 + AluSx SINE Alu 1 309 -3 1207 107 0 11 chr10 15236412 15236590 -125080175 + L1PA8 LINE L1 5989 6164 -8 408 267 30 15 chr10 15236645 15236776 -125079989 + MIR SINE MIR 81 213 -49 389 306 50 0 chr10 15236819 15236940 -125079825 + MIR3 SINE MIR 41 167 -41 2259 106 0 22 chr10 15237466 15237778 -125078987 + AluSp SINE Alu 1 305 -8 274 258 22 0 chr10 15238316 15238411 -125078354 + L1MC4 LINE L1 7074 7255 -633 529 235 84 67 chr10 15238532 15238817 -125077948 + L1MC5 LINE L1 7287 7576 -385 36 23 0 0 chr10 15239895 15239938 -125076827 + AT_rich Low_complexity Low_complexity 1 43 0 1815 111 67 54 chr10 15240181 15240479 -125076286 + AluSq SINE Alu 1 302 -11 1593 157 60 17 chr10 15240999 15241298 -125075467 + AluJo SINE Alu 1 312 0 200 292 0 0 chr10 15241567 15241615 -125075150 + MIR SINE MIR 215 262 0 513 269 195 21 chr10 15241730 15242012 -125074753 + L1MB7 LINE L1 5843 6173 -11 334 287 52 52 chr10 15242112 15242189 -125074576 + MIR SINE MIR 13 89 -173 1609 103 5 0 chr10 15242189 15242403 -125074362 - AluSg/x SINE Alu -9 303 89 334 287 52 52 chr10 15242403 15242499 -125074266 + MIR SINE MIR 88 186 -76 244 250 45 45 chr10 15242500 15242632 -125074133 + L2 LINE L2 2376 2507 -807 554 241 156 71 chr10 15242800 15243249 -125073516 + L2 LINE L2 2826 3312 -1 252 261 43 22 chr10 15243655 15243747 -125073018 - MIR SINE MIR -87 175 82 2336 97 3 7 chr10 15244433 15244741 -125072024 + AluSx SINE Alu 1 307 -5 1403 226 26 0 chr10 15244750 15245060 -125071705 - L1 LINE L1 -797 5349 5032 1947 199 35 9 chr10 15245060 15245486 -125071279 + L1MB1 LINE L1 5729 6165 -3 182 279 16 0 chr10 15245615 15245676 -125071089 - MIR SINE MIR -124 138 77 892 125 0 0 chr10 15246288 15246408 -125070357 + FLAM_C SINE Alu 1 120 -23 1580 183 3 7 chr10 15247418 15247708 -125069057 - AluJo SINE Alu -23 289 1 760 177 8 0 chr10 15247709 15247833 -125068932 - AluJo/FLAM SINE Alu -186 126 2 197 254 73 0 chr10 15247878 15247933 -125068832 + L2 LINE L2 3209 3267 -5 180 0 0 0 chr10 15248690 15248710 -125068055 + (TGAA)n Simple_repeat Simple_repeat 4 23 0 318 26 0 0 chr10 15249767 15249806 -125066959 + (CA)n Simple_repeat Simple_repeat 1 39 0 442 228 6 11 chr10 15250211 15250391 -125066374 + CT-rich Low_complexity Low_complexity 2 180 0 796 151 78 50 chr10 15251956 15252135 -125064630 + MLT1B LTR MaLR 1 184 -206 200 119 0 48 chr10 15252139 15252181 -125064584 + (TCCC)n Simple_repeat Simple_repeat 1 40 0 1083 195 10 5 chr10 15252215 15252415 -125064350 + MLT1B LTR MaLR 188 388 -2 215 288 0 41 chr10 15252949 15253022 -125063743 + L2 LINE L2 3201 3270 -2 987 235 76 90 chr10 15253801 15254355 -125062410 - MLT1H LTR MaLR 0 549 4 2655 192 46 38 chr10 15254651 15255260 -125061505 - MLT1E3 LTR MaLR 0 624 11 2453 86 0 0 chr10 15255529 15255830 -125060935 + AluY SINE Alu 1 301 -10 405 0 0 0 chr10 15256952 15256997 -125059768 + (TA)n Simple_repeat Simple_repeat 2 46 0 609 242 112 51 chr10 15257138 15257353 -125059412 - MLT1E3 LTR MaLR -67 557 330 214 268 16 0 chr10 15257359 15257482 -125059283 + (TA)n Simple_repeat Simple_repeat 1 125 0 289 274 91 16 chr10 15258236 15258422 -125058343 + L1M4 LINE L1 3249 3448 -2698 2156 135 0 6 chr10 15258428 15258739 -125058026 - AluSx SINE Alu -3 309 1 2204 108 0 0 chr10 15259316 15259612 -125057153 + AluSx SINE Alu 1 296 -16 752 236 186 92 chr10 15259718 15259858 -125056907 - L2 LINE L2 -1080 2234 2109 2348 102 0 13 chr10 15259858 15260163 -125056602 + AluSx SINE Alu 1 301 -11 752 236 186 92 chr10 15260163 15260515 -125056250 - L2 LINE L2 -1205 2109 1682 2255 128 0 0 chr10 15260515 15260813 -125055952 + AluSx SINE Alu 2 299 -13 752 236 186 92 chr10 15260813 15260874 -125055891 - L2 LINE L2 -1632 1682 1628 337 325 60 40 chr10 15260922 15261122 -125055643 + L2 LINE L2 2865 3068 -204 24 32 0 0 chr10 15261397 15261428 -125055337 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr10 15261591 15261616 -125055149 + AT_rich Low_complexity Low_complexity 1 25 0 1841 156 20 7 chr10 15262108 15262409 -125054356 + AluJb SINE Alu 1 305 -7 292 336 7 18 chr10 15262409 15262614 -125054151 + GA-rich Low_complexity Low_complexity 1 202 0 474 181 0 0 chr10 15263284 15263367 -125053398 + AluSc SINE Alu 141 223 -86 3191 214 80 38 chr10 15263388 15263917 -125052848 - L1ME1 LINE L1 -6 6160 5655 1550 175 46 117 chr10 15263917 15264022 -125052743 + MLT1C LTR MaLR 1 112 -355 2002 138 7 0 chr10 15264022 15264311 -125052454 + AluSx SINE Alu 1 291 -21 1550 175 46 117 chr10 15264311 15264703 -125052062 + MLT1C LTR MaLR 112 463 -4 3191 214 80 38 chr10 15264703 15265477 -125051288 - L1ME1 LINE L1 -511 5655 4915 2562 65 3 0 chr10 15265477 15265784 -125050981 - AluSc SINE Alu -1 308 1 3191 214 80 38 chr10 15265784 15266001 -125050764 - L1ME1 LINE L1 -1251 4915 4709 2000 64 0 0 chr10 15266001 15266252 -125050513 - L1PA7 LINE L1 -2 6152 5902 3191 214 80 38 chr10 15266252 15266622 -125050143 - L1ME1 LINE L1 -1457 4709 4187 453 307 60 60 chr10 15267588 15267776 -125048989 - L2 LINE L2 -4 3268 3078 2267 78 4 0 chr10 15267776 15268057 -125048708 - AluSg SINE Alu -13 297 16 453 307 60 60 chr10 15268057 15268119 -125048646 - L2 LINE L2 -193 3079 3018 2019 119 4 0 chr10 15269015 15269293 -125047472 + AluSx SINE Alu 7 285 -27 1699 148 4 4 chr10 15269847 15270111 -125046654 + AluSx SINE Alu 29 292 -20 2242 110 7 3 chr10 15270408 15270707 -125046058 + AluSx SINE Alu 1 300 -12 297 75 0 0 chr10 15270715 15270755 -125046010 + (TG)n Simple_repeat Simple_repeat 2 41 0 2225 43 0 0 chr10 15271965 15272219 -125044546 - AluY SINE Alu -8 303 50 1753 164 13 10 chr10 15272957 15273256 -125043509 + AluJo SINE Alu 1 300 -12 2412 85 3 7 chr10 15273578 15273883 -125042882 - AluSq SINE Alu -9 304 1 882 130 0 0 chr10 15274226 15274349 -125042416 + AluJ SINE Alu 11 133 -179 24 0 0 0 chr10 15274553 15274577 -125042188 + AT_rich Low_complexity Low_complexity 1 24 0 737 73 63 21 chr10 15274650 15274987 -125041778 + (TA)n Simple_repeat Simple_repeat 1 351 0 2293 76 3 3 chr10 15274987 15275277 -125041488 - AluY SINE Alu -21 290 1 30 27 0 0 chr10 15275278 15275315 -125041450 + AT_rich Low_complexity Low_complexity 1 37 0 553 168 74 108 chr10 15276019 15276222 -125040543 + AluJo SINE Alu 13 208 -104 731 223 11 40 chr10 15276631 15276806 -125039959 + AluJ SINE Alu 118 287 -25 529 285 24 6 chr10 15277741 15277906 -125038859 - MER45A DNA AcHobo 0 178 11 2263 93 3 26 chr10 15277968 15278281 -125038484 + AluSx SINE Alu 1 306 -6 2396 79 0 3 chr10 15278282 15278586 -125038179 + AluY SINE Alu 2 304 -7 2260 108 14 0 chr10 15278869 15279164 -125037601 + AluSx SINE Alu 1 299 -13 25 31 0 0 chr10 15279484 15279516 -125037249 + AT_rich Low_complexity Low_complexity 1 32 0 2308 89 0 13 chr10 15280067 15280371 -125036394 + AluY SINE Alu 1 300 -11 548 194 144 94 chr10 15280487 15280688 -125036077 + L1ME LINE L1 6 216 -5854 2104 120 7 7 chr10 15280761 15281069 -125035696 + AluSx SINE Alu 1 308 -4 216 158 0 0 chr10 15281069 15281107 -125035658 + GA-rich Low_complexity Low_complexity 1 38 0 567 304 12 41 chr10 15281122 15281365 -125035400 + L1ME LINE L1 260 495 -5575 2215 127 0 0 chr10 15281577 15281884 -125034881 - AluSx SINE Alu -5 307 1 2178 134 0 0 chr10 15282179 15282486 -125034279 - AluSx SINE Alu -5 307 1 219 88 0 0 chr10 15282865 15282899 -125033866 + (GA)n Simple_repeat Simple_repeat 1 34 0 897 163 18 24 chr10 15283090 15283256 -125033509 - MLT1B LTR MaLR -205 185 21 1258 311 92 38 chr10 15283317 15283782 -125032983 - L1MEd LINE L1 -5333 786 265 1993 204 127 54 chr10 15283782 15283907 -125032858 + MLT1E LTR MaLR 1 116 -477 1644 173 10 33 chr10 15283907 15284208 -125032557 + AluJb SINE Alu 1 294 -18 1993 204 127 54 chr10 15284208 15284635 -125032130 + MLT1E LTR MaLR 116 593 0 1258 311 92 38 chr10 15284635 15284911 -125031854 - L1MEd LINE L1 -5854 265 5 1755 174 0 10 chr10 15285465 15285753 -125031012 + AluJb SINE Alu 3 287 -25 248 273 34 68 chr10 15285777 15285865 -125030900 + L2 LINE L2 3005 3089 -183 209 338 137 24 chr10 15286216 15286530 -125030235 + L2 LINE L2 2715 3058 -214 748 277 119 13 chr10 15286625 15286860 -125029905 - MIR SINE MIR -1 261 2 364 257 83 42 chr10 15287225 15287369 -125029396 - MIR3 SINE MIR -10 198 49 1589 180 33 91 chr10 15287975 15288370 -125028395 - MLT1A2 LTR MaLR -2 372 1 3089 230 60 68 chr10 15288376 15289613 -125027152 - MLT1A2-int LTR MaLR -7 1364 5 1393 232 126 69 chr10 15289617 15289965 -125026800 - MLT2B1 LTR ERVL 0 520 134 2149 137 0 0 chr10 15289965 15290264 -125026501 - AluSx SINE Alu -13 299 1 1393 232 126 69 chr10 15290264 15290407 -125026358 - MLT2B1 LTR ERVL -386 134 1 357 221 124 138 chr10 15290757 15290974 -125025791 - MIR SINE MIR -1 261 48 267 377 11 2 chr10 15291097 15291214 -125025551 + MIR SINE MIR 32 147 -64 4111 117 35 2 chr10 15292744 15293335 -125023430 - L1PB3 LINE L1 0 6154 5544 2529 77 0 3 chr10 15293336 15293648 -125023117 - AluY SINE Alu 0 311 1 204 98 0 176 chr10 15293719 15293770 -125022995 + L2 LINE L2 3272 3313 0 2174 104 0 0 chr10 15293953 15294259 -125022506 + AluSg SINE Alu 3 308 0 1231 237 125 24 chr10 15294566 15294983 -125021782 - MLT1C LTR MaLR -8 459 1 2175 213 101 9 chr10 15294983 15295658 -125021107 + L1M4 LINE L1 943 1679 -4863 1599 167 11 0 chr10 15295772 15296059 -125020706 + L1 LINE L1 4629 4918 -1228 447 133 4 0 chr10 15296111 15296190 -125020575 - L1P4 LINE L1 -677 5479 5399 640 170 30 10 chr10 15296198 15296350 -125020415 + L1MD3 LINE L1 6857 7041 -793 882 249 4 0 chr10 15296856 15297081 -125019684 + L1M4 LINE L1 3148 3373 -3271 22 0 0 0 chr10 15297873 15297895 -125018870 + AT_rich Low_complexity Low_complexity 1 22 0 198 277 0 0 chr10 15298811 15298858 -125017907 + MIR3 SINE MIR 147 193 -15 2362 96 0 0 chr10 15298981 15299284 -125017481 + AluSx SINE Alu 1 303 -9 239 163 47 0 chr10 15299364 15299407 -125017358 + L2 LINE L2 3009 3053 -260 22 0 0 0 chr10 15299414 15299436 -125017329 + AT_rich Low_complexity Low_complexity 1 22 0 1562 137 47 8 chr10 15299479 15299735 -125017030 - AluJo SINE Alu -6 306 41 613 162 10 0 chr10 15299835 15299934 -125016831 + MER46A DNA MER2_type 137 236 0 1440 244 150 31 chr10 15300033 15300193 -125016572 + L1M4 LINE L1 2115 2255 -3891 2504 72 0 3 chr10 15300193 15300499 -125016266 + AluY SINE Alu 1 305 -6 1440 244 150 31 chr10 15300499 15301165 -125015600 + L1M4 LINE L1 2255 3039 -3107 288 226 124 138 chr10 15301343 15301560 -125015205 - MIR SINE MIR -1 261 48 267 377 11 2 chr10 15301684 15301801 -125014964 + MIR SINE MIR 32 147 -64 2133 108 0 23 chr10 15303092 15303398 -125013367 + AluSx SINE Alu 3 301 -11 226 288 94 100 chr10 15304507 15304677 -125012088 - L2 LINE L2 -5 3267 3099 5377 139 55 6 chr10 15304699 15305554 -125011211 + MER4D LTR ERV1 2 898 -5 252 200 0 0 chr10 15305905 15305960 -125010805 - L1ME4a LINE L1 0 6121 6067 1897 132 24 14 chr10 15305983 15306279 -125010486 - AluSx SINE Alu -13 299 1 22 0 0 0 chr10 15306519 15306541 -125010224 + AT_rich Low_complexity Low_complexity 1 22 0 670 236 152 6 chr10 15306654 15306832 -125009933 + LTR16C LTR ERVL 288 491 0 2240 95 14 0 chr10 15307017 15307312 -125009453 + AluSp SINE Alu 1 299 -14 578 309 68 16 chr10 15308103 15308341 -125008424 + MIR SINE MIR 4 242 -20 607 238 84 0 chr10 15309822 15309965 -125006800 - Charlie8 DNA MER1_type -2235 182 28 2203 141 133 8 chr10 15310632 15311016 -125005749 - MSTB1 LTR MaLR 0 432 1 189 0 0 0 chr10 15311112 15311133 -125005632 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 953 61 0 0 chr10 15311133 15311248 -125005517 - AluSg/x SINE Alu -32 280 166 468 242 98 7 chr10 15311310 15311463 -125005302 - LTR16C LTR ERVL -2 489 323 1747 143 7 7 chr10 15313503 15313789 -125002976 - AluJb SINE Alu -10 302 17 190 271 94 0 chr10 15314243 15314328 -125002437 - L2 LINE L2 -1 3312 3220 247 108 27 0 chr10 15314353 15314390 -125002375 - U2 snRNA snRNA -150 38 1 822 264 51 36 chr10 15314432 15314708 -125002057 - L2 LINE L2 -1 3312 3033 1987 112 17 24 chr10 15314852 15315173 -125001592 + AluSx SINE Alu 1 312 0 2087 136 147 5 chr10 15316566 15316933 -124999832 + MSTA LTR MaLR 7 425 -3 2397 166 108 31 chr10 15316945 15317428 -124999337 + MLT2B1 LTR ERVL 1 520 0 227 283 0 0 chr10 15317907 15317953 -124998812 - L2 LINE L2 -82 3190 3145 1511 123 5 9 chr10 15318071 15318290 -124998475 - AluJb SINE Alu -14 298 81 2154 166 35 29 chr10 15318490 15319038 -124997727 + MLT2A2 LTR ERVL 1 554 0 730 78 0 0 chr10 15319097 15319187 -124997578 - 5S rRNA rRNA -31 90 1 234 0 0 0 chr10 15319580 15319606 -124997159 + (A)n Simple_repeat Simple_repeat 1 26 0 2249 148 0 3 chr10 15320079 15320409 -124996356 + MER7A DNA MER2_type 1 327 -19 271 273 0 13 chr10 15320421 15320498 -124996267 + L2 LINE L2 3193 3268 -4 439 308 123 18 chr10 15321719 15321870 -124994895 - L2 LINE L2 -6 3307 3173 2609 112 3 5 chr10 15321870 15322246 -124994519 - THE1C LTR MaLR 0 375 1 439 308 123 18 chr10 15322246 15322370 -124994395 - L2 LINE L2 -140 3173 3003 2132 118 6 19 chr10 15323722 15324035 -124992730 - AluSc SINE Alu 0 309 1 195 225 0 0 chr10 15324367 15324407 -124992358 - L2 LINE L2 -5 3267 3228 1984 142 10 7 chr10 15324778 15325088 -124991677 + AluJb SINE Alu 1 311 -1 3684 103 33 70 chr10 15325099 15325761 -124991004 + L1MA4A LINE L1 5658 6295 -8 202 277 9 62 chr10 15326411 15326523 -124990242 + L3b LINE CR1 1379 1484 -99 675 282 63 66 chr10 15326811 15326919 -124989846 + MLT1K LTR MaLR 116 223 -365 1725 115 77 71 chr10 15326919 15327258 -124989507 - MER61A LTR ERV1 0 343 3 675 282 63 66 chr10 15327258 15327560 -124989205 + MLT1K LTR MaLR 223 525 -63 204 67 0 0 chr10 15327564 15327594 -124989171 + (A)n Simple_repeat Simple_repeat 1 30 0 2222 103 33 0 chr10 15327776 15328078 -124988687 - AluSx SINE Alu 0 312 1 641 176 9 0 chr10 15328226 15328334 -124988431 - MER7A DNA MER2_type -239 107 1 6427 109 33 29 chr10 15328687 15329722 -124987043 - L1MA5 LINE L1 -2 6298 5260 1879 179 6 0 chr10 15329720 15330073 -124986692 + L1MA5 LINE L1 4921 5275 -871 * 949 251 8 47 chr10 15330067 15330302 -124986463 - L1M3de LINE L1 -6071 582 357 * 873 244 65 101 chr10 15330288 15330418 -124986347 - L1M3de LINE L1 -5710 943 810 * 1225 163 178 38 chr10 15330418 15330682 -124986083 - AluJb SINE Alu -1 301 1 873 244 65 101 chr10 15330682 15330930 -124985835 - L1M3de LINE L1 -5843 810 2 315 320 30 44 chr10 15331308 15331511 -124985254 - L1ME LINE L1 -359 5762 5563 1928 170 0 3 chr10 15331566 15331878 -124984887 + AluJb SINE Alu 1 311 -1 1033 256 6 19 chr10 15332531 15332881 -124983884 + LTR16A LTR ERVL 52 440 -10 185 323 11 21 chr10 15332890 15332983 -124983782 - MIR SINE MIR -168 94 3 2575 52 0 0 chr10 15333030 15333336 -124983429 + AluY SINE Alu 1 306 -5 232 254 0 127 chr10 15333338 15333395 -124983370 - MER5B DNA MER1_type -54 124 88 687 182 0 0 chr10 15333395 15333505 -124983260 + MER81 DNA DNA 5 114 0 232 254 0 127 chr10 15333505 15333565 -124983200 - MER5B DNA MER1_type -90 88 22 206 250 0 36 chr10 15333525 15333581 -124983184 + MER5A DNA MER1_type 130 183 -6 * 516 200 77 8 chr10 15333689 15333819 -124982946 - MIR SINE MIR -101 161 23 204 333 75 25 chr10 15334119 15334239 -124982526 - L2 LINE L2 -10 3262 3137 221 182 18 0 chr10 15334299 15334354 -124982411 + CT-rich Low_complexity Low_complexity 3 58 0 210 329 0 14 chr10 15334716 15334786 -124981979 + MIR SINE MIR 20 88 -174 1984 156 0 3 chr10 15334818 15335120 -124981645 - AluJo SINE Alu -10 302 2 3589 71 4 0 chr10 15335342 15335793 -124980972 + MLT2A2 LTR ERVL 1 453 0 2409 94 0 0 chr10 15335982 15336280 -124980485 + AluSx SINE Alu 1 298 -14 590 223 0 36 chr10 15336468 15336607 -124980158 + LTR16A LTR ERVL 259 392 -58 230 318 143 32 chr10 15336836 15336990 -124979775 - MER5A DNA MER1_type -2 187 17 * 311 252 165 8 chr10 15336865 15336992 -124979773 + MER5A DNA MER1_type 43 189 0 230 313 64 73 chr10 15337004 15337346 -124979419 - MLT1K LTR MaLR -115 473 135 2260 125 0 0 chr10 15337937 15338241 -124978524 + AluSx SINE Alu 1 304 -8 2795 74 0 0 chr10 15338241 15338618 -124978147 + L1PA7 LINE L1 5802 6178 0 1792 175 35 38 chr10 15339631 15339860 -124976905 - MLT1A1 LTR MaLR 0 365 136 2262 115 3 3 chr10 15339860 15340172 -124976593 + AluSx SINE Alu 1 312 0 1792 175 35 38 chr10 15340172 15340308 -124976457 - MLT1A1 LTR MaLR -229 136 1 1496 170 42 64 chr10 15340506 15340818 -124975947 - AluJo SINE Alu -7 305 1 2026 150 3 13 chr10 15340828 15341142 -124975623 - AluJo SINE Alu -1 311 1 2083 111 26 88 chr10 15341461 15341797 -124974968 - THE1B LTR MaLR -2 362 51 2280 103 0 13 chr10 15341797 15342099 -124974666 + AluSx SINE Alu 1 298 -14 2083 111 26 88 chr10 15342099 15342148 -124974617 - THE1B LTR MaLR -313 51 1 231 250 0 0 chr10 15343496 15343580 -124973185 + (CA)n Simple_repeat Simple_repeat 1 84 0 2141 153 49 35 chr10 15343587 15344130 -124972635 + MLT2A2 LTR ERVL 1 554 0 183 259 0 0 chr10 15344130 15344188 -124972577 + (CA)n Simple_repeat Simple_repeat 1 58 0 377 257 76 0 chr10 15344699 15344804 -124971961 - L2 LINE L2 -1 3271 3159 1708 171 73 0 chr10 15344809 15345095 -124971670 + AluJb SINE Alu 1 307 -5 1806 156 33 23 chr10 15345370 15345677 -124971088 + AluJb SINE Alu 1 310 -2 309 109 0 0 chr10 15345691 15345737 -124971028 + (GGGA)n Simple_repeat Simple_repeat 4 49 0 506 259 91 49 chr10 15345830 15346128 -124970637 + LTR33 LTR ERVL 97 445 -76 2245 98 3 7 chr10 15346128 15346435 -124970330 - AluSc SINE Alu -3 306 1 506 259 91 49 chr10 15346435 15346516 -124970249 + LTR33 LTR ERVL 445 521 0 855 189 0 7 chr10 15346722 15346875 -124969890 - FRAM SINE Alu -14 152 1 301 263 59 25 chr10 15347153 15347271 -124969494 - MIR SINE MIR -24 238 117 2243 112 3 3 chr10 15347287 15347591 -124969174 + AluSx SINE Alu 1 304 -8 413 217 76 0 chr10 15348283 15348375 -124968390 - MER94 DNA DNA -34 100 2 1201 203 28 80 chr10 15348851 15348873 -124967892 - L1MA9 LINE L1 -38 6274 6252 2296 81 7 7 chr10 15348873 15349169 -124967596 + AluSx SINE Alu 1 296 -16 1201 203 28 80 chr10 15349169 15349536 -124967229 - L1MA9 LINE L1 -60 6252 5905 8812 187 23 17 chr10 15349609 15350071 -124966694 - L1MA9 LINE L1 -366 5946 5488 2241 91 3 3 chr10 15350071 15350356 -124966409 - AluSp SINE Alu -21 292 8 8812 187 23 17 chr10 15350356 15352351 -124964414 - L1MA9 LINE L1 -824 5488 3481 2118 143 0 0 chr10 15353522 15353823 -124962942 + AluSx SINE Alu 1 301 -11 214 384 48 0 chr10 15354203 15354328 -124962437 - MIR SINE MIR -53 209 79 502 120 13 0 chr10 15354502 15354577 -124962188 - MADE1 DNA Mariner -4 76 1 2850 178 13 5 chr10 15354870 15355421 -124961344 - MLT2B1 LTR ERVL 0 554 1 2343 104 0 13 chr10 15355596 15355912 -124960853 - AluSx SINE Alu 0 312 1 234 0 0 0 chr10 15356507 15356533 -124960232 + (A)n Simple_repeat Simple_repeat 1 26 0 2266 115 0 6 chr10 15356911 15357225 -124959540 - AluSx SINE Alu 0 312 1 191 271 112 28 chr10 15357278 15357385 -124959380 - MIR3 SINE MIR -3 205 90 1769 171 26 10 chr10 15358025 15358330 -124958435 - AluSx SINE Alu -2 310 1 1191 190 52 54 chr10 15358515 15358969 -124957796 + LTR29 LTR ERV1 138 644 0 2247 95 6 25 chr10 15358997 15359313 -124957452 - AluSx SINE Alu -2 310 1 333 0 0 0 chr10 15359948 15359985 -124956780 + (TG)n Simple_repeat Simple_repeat 2 38 0 4466 178 9 57 chr10 15360300 15360426 -124956339 + L1MB3 LINE L1 5208 5338 -845 2156 150 0 0 chr10 15360426 15360733 -124956032 + AluSx SINE Alu 1 307 -5 4466 178 9 57 chr10 15360733 15361522 -124955243 + L1MB3 LINE L1 5338 6163 -20 4032 149 12 22 chr10 15361522 15361905 -124954860 + LTR51 LTR ERV1 1 375 -296 1463 161 0 74 chr10 15361905 15362190 -124954575 - AluJo SINE Alu -21 291 28 4032 149 12 22 chr10 15362190 15362484 -124954281 + LTR51 LTR ERV1 375 671 0 4466 178 9 57 chr10 15362484 15362534 -124954231 + L1MB3 LINE L1 6163 6128 -55 2086 106 7 3 chr10 15362534 15362867 -124953898 + AluSg SINE Alu 1 334 0 4466 178 9 57 chr10 15362867 15362911 -124953854 + L1MB3 LINE L1 6127 6172 -11 1947 149 0 10 chr10 15363769 15364065 -124952700 - AluSx SINE Alu -19 293 1 5343 169 24 22 chr10 15364300 15364961 -124951804 + L1MC2 LINE L1 5122 5734 -610 2466 121 5 24 chr10 15364961 15365332 -124951433 - THE1B LTR MaLR 0 364 1 5343 169 24 22 chr10 15365332 15365936 -124950829 + L1MC2 LINE L1 5734 6335 -9 550 146 0 0 chr10 15365992 15366074 -124950691 + FRAM SINE Alu 43 124 -52 384 22 0 0 chr10 15366117 15366162 -124950603 + (CA)n Simple_repeat Simple_repeat 2 46 0 257 152 22 0 chr10 15366167 15366213 -124950552 - MER5B DNA MER1_type -46 132 86 579 241 0 0 chr10 15366213 15366321 -124950444 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 4363 119 29 41 chr10 15366313 15366604 -124950161 + Tigger3(Golem) DNA MER2_type 2279 2572 -457 2098 121 7 7 chr10 15366604 15366894 -124949871 - AluSg SINE Alu -20 290 1 4363 119 29 41 chr10 15366894 15367324 -124949441 + Tigger3(Golem) DNA MER2_type 2572 2993 -36 2301 112 0 0 chr10 15367324 15367627 -124949138 - AluSx SINE Alu -9 303 1 4363 119 29 41 chr10 15367627 15367663 -124949102 + Tigger3(Golem) DNA MER2_type 2993 3028 -1 696 138 0 0 chr10 15367853 15367962 -124948803 + L1MA2 LINE L1 6196 6304 0 1986 115 4 11 chr10 15367993 15368272 -124948493 + AluSx SINE Alu 1 277 -35 202 182 0 0 chr10 15368295 15368328 -124948437 + polypurine Low_complexity Low_complexity 2 34 0 283 196 0 0 chr10 15368880 15368936 -124947829 + L1ME LINE L1 5579 5634 -487 248 198 10 104 chr10 15369372 15369468 -124947297 + L1ME LINE L1 5656 5742 -420 3255 134 2 2 chr10 15369405 15369890 -124946875 + L1PA15 LINE L1 5679 6163 -2 431 282 103 34 chr10 15370584 15371105 -124945660 + HAL1 LINE L1 619 1200 -1307 291 216 0 0 chr10 15371119 15371169 -124945596 - MLT1F1 LTR MaLR 0 542 493 2476 212 38 22 chr10 15371169 15371669 -124945096 + MLT2B3 LTR ERVL 1 508 -46 1686 199 145 8 chr10 15371883 15372269 -124944496 - MLT1F1 LTR MaLR -47 520 82 216 218 146 0 chr10 15372393 15372448 -124944317 + MIR SINE MIR 89 151 -111 2109 109 7 13 chr10 15372498 15372802 -124943963 + AluSx SINE Alu 2 303 -9 1853 215 42 75 chr10 15372955 15373528 -124943237 - MLT2B3 LTR ERVL 0 554 1 2065 98 17 48 chr10 15373738 15374033 -124942732 + AluSx SINE Alu 3 288 -24 402 188 9 40 chr10 15374033 15374261 -124942504 + GA-rich Low_complexity Low_complexity 1 221 0 228 236 59 71 chr10 15374596 15374735 -124942030 - MIR SINE MIR -67 141 42 681 233 112 8 chr10 15375231 15375668 -124941097 + LTR33A LTR ERVL 1 519 -4 476 265 45 23 chr10 15375711 15375843 -124940922 + MIR3 SINE MIR 33 167 -41 2281 111 0 0 chr10 15375951 15376248 -124940517 - AluSx SINE Alu -15 297 1 7411 47 2 0 chr10 15376539 15377711 -124939054 - L1PA6 LINE L1 0 6154 4983 2020 192 15 5 chr10 15377764 15378159 -124938606 - L1MB7 LINE L1 -54 6130 5732 * 2250 179 32 6 chr10 15378154 15378728 -124938037 - L1MB7 LINE L1 -661 5517 4935 251 35 0 0 chr10 15379714 15379743 -124937022 + LTR6A LTR ERV1 73 101 -463 1233 208 50 13 chr10 15379898 15380216 -124936549 - L1M4 LINE L1 -1094 5052 4723 1461 197 7 124 chr10 15381100 15381512 -124935253 - MLT1A2 LTR MaLR 0 374 11 1354 105 0 0 chr10 15381517 15381688 -124935077 - AluSg/x SINE Alu -8 304 134 2342 100 3 0 chr10 15381688 15381988 -124934777 - AluSq SINE Alu -12 301 1 4007 103 2 0 chr10 15382455 15382981 -124933784 - MER1A DNA MER1_type 0 527 1 1319 260 60 16 chr10 15383081 15383446 -124933319 + LTR16C LTR ERVL 36 416 -75 189 0 0 0 chr10 15384026 15384047 -124932718 + (TG)n Simple_repeat Simple_repeat 1 21 0 1493 221 0 20 chr10 15384693 15384991 -124931774 - AluJo SINE Alu -17 295 4 331 203 0 0 chr10 15385002 15385071 -124931694 - MIR SINE MIR -108 154 86 249 322 44 0 chr10 15385087 15385177 -124931588 - L2 LINE L2 -17 3296 3203 539 185 42 111 chr10 15385290 15385349 -124931416 - MER5B DNA MER1_type -2 176 115 4589 56 0 0 chr10 15385349 15385904 -124930861 + L1PA8 LINE L1 5608 6162 -10 539 185 42 111 chr10 15385904 15386033 -124930732 - MER5B DNA MER1_type -63 115 1 399 335 118 20 chr10 15386292 15386442 -124930323 - L2 LINE L2 -562 2752 2618 655 171 9 0 chr10 15386442 15386553 -124930212 - MER81 DNA DNA 0 114 3 399 335 118 20 chr10 15386553 15386793 -124929972 - L2 LINE L2 -696 2618 2324 274 235 147 59 chr10 15386848 15386950 -124929815 - L2 LINE L2 -18 3254 3144 2213 116 0 0 chr10 15386975 15387267 -124929498 + AluSx SINE Alu 1 292 -20 2024 163 42 0 chr10 15387319 15387650 -124929115 + MER7A DNA MER2_type 1 343 -3 331 346 8 0 chr10 15387702 15387829 -124928936 - MER94 DNA DNA -3 131 4 316 79 22 93 chr10 15388494 15388633 -124928132 + (TTATA)n Simple_repeat Simple_repeat 1 129 0 234 243 40 20 chr10 15388670 15388822 -124927943 + (TATAA)n Simple_repeat Simple_repeat 5 159 0 462 284 65 14 chr10 15389344 15389532 -124927233 - MIR SINE MIR -64 198 4 1656 113 4 9 chr10 15390072 15390303 -124926462 - MER30 DNA MER1_type 0 230 1 534 108 24 0 chr10 15390439 15390522 -124926243 - AluY SINE Alu -11 300 216 1447 115 42 0 chr10 15390877 15391094 -124925671 - MER30 DNA MER1_type 0 230 5 204 262 119 32 chr10 15391874 15392000 -124924765 - MIR3 SINE MIR -25 183 47 253 274 16 0 chr10 15392944 15393006 -124923759 + GA-rich Low_complexity Low_complexity 4 66 0 1605 168 33 4 chr10 15393035 15393348 -124923417 + AluSx SINE Alu 1 321 0 312 27 0 0 chr10 15393459 15393496 -124923269 + (TC)n Simple_repeat Simple_repeat 1 37 0 324 321 23 59 chr10 15393705 15393926 -124922839 - MIR SINE MIR -20 242 30 607 261 145 48 chr10 15394533 15394947 -124921818 - MLT1H LTR MaLR -13 536 83 726 226 97 196 chr10 15395129 15395312 -124921453 + MLT1K LTR MaLR 14 213 -375 234 91 0 0 chr10 15395312 15395345 -124921420 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 726 226 97 196 chr10 15395345 15395633 -124921132 + MLT1K LTR MaLR 213 410 -178 4751 141 41 15 chr10 15395633 15396493 -124920272 + L1MC2 LINE L1 5462 6343 -1 726 226 97 196 chr10 15396493 15396648 -124920117 + MLT1K LTR MaLR 410 579 -9 2267 54 50 30 chr10 15397411 15397709 -124919056 - AluY SINE Alu -7 304 1 1919 153 0 19 chr10 15397799 15398113 -124918652 - AluJo SINE Alu -4 308 1 206 310 100 10 chr10 15398171 15398271 -124918494 + L2 LINE L2 3198 3306 -7 201 343 143 13 chr10 15398444 15398759 -124918006 + L2 LINE L2 1728 2083 -1231 25219 153 33 19 chr10 15398760 15403180 -124913585 - L1P4 LINE L1 -709 5459 974 189 74 0 0 chr10 15403180 15403207 -124913558 + (TTG)n Simple_repeat Simple_repeat 1 27 0 25219 153 33 19 chr10 15403207 15403513 -124913252 - L1P4 LINE L1 -5194 974 674 417 355 160 3 chr10 15403677 15403959 -124912806 + L2 LINE L2 2947 3272 0 545 247 96 83 chr10 15404018 15404509 -124912256 + LTR67 LTR ERVL 2 556 -1 2270 102 3 0 chr10 15406025 15406319 -124910446 + AluSx SINE Alu 1 295 -17 804 195 34 13 chr10 15406370 15406519 -124910246 + AluJo SINE Alu 12 163 -149 888 193 6 6 chr10 15407195 15407361 -124909404 - FRAM SINE Alu -10 166 1 1970 146 3 3 chr10 15408344 15408639 -124908126 + AluJo SINE Alu 1 295 -17 347 246 9 18 chr10 15408845 15408959 -124907806 + (CA)n Simple_repeat Simple_repeat 2 114 0 2188 125 7 0 chr10 15409627 15409932 -124906833 - AluSx SINE Alu -5 307 1 369 255 108 40 chr10 15410206 15410457 -124906308 + MLT1K LTR MaLR 290 557 -31 1296 96 12 0 chr10 15411014 15411180 -124905585 + AluSq SINE Alu 62 229 -84 207 100 0 0 chr10 15411190 15411220 -124905545 + (A)n Simple_repeat Simple_repeat 1 30 0 235 261 75 60 chr10 15411507 15411641 -124905124 - MIR3 SINE MIR -37 171 36 423 345 7 0 chr10 15411668 15411816 -124904949 + L2 LINE L2 3123 3271 -1 1345 167 56 0 chr10 15411980 15412214 -124904551 + MLT2C1 LTR ERVL 1 247 -150 4667 91 25 5 chr10 15412216 15412862 -124903903 + L1PA13 LINE L1 5502 6160 -3 547 250 66 7 chr10 15413025 15413161 -124903604 + MLT2C1 LTR ERVL 234 377 -20 186 43 0 0 chr10 15413587 15413610 -124903155 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 458 265 24 36 chr10 15414098 15414264 -124902501 + MER5B DNA MER1_type 1 164 -14 761 169 50 12 chr10 15414425 15414585 -124902180 + FRAM SINE Alu 1 166 0 2269 81 7 3 chr10 15414588 15414920 -124901845 + AluSp SINE Alu 1 333 0 431 305 20 33 chr10 15415202 15415353 -124901412 + L2 LINE L2 3123 3271 -1 2013 155 0 0 chr10 15415403 15415707 -124901058 - AluSq SINE Alu -9 304 1 2100 92 0 0 chr10 15416473 15416733 -124900032 + AluSx SINE Alu 50 309 -3 2039 127 13 3 chr10 15417291 15417591 -124899174 - AluSx SINE Alu -9 303 1 436 307 40 0 chr10 15417774 15417924 -124898841 - MLT1L LTR MaLR -132 483 328 1718 122 0 4 chr10 15418203 15418441 -124898324 + AluSx SINE Alu 43 279 -33 432 0 0 0 chr10 15418441 15418489 -124898276 + (CA)n Simple_repeat Simple_repeat 1 48 0 2058 117 7 0 chr10 15418667 15418957 -124897808 + AluSx SINE Alu 1 292 -20 445 210 83 38 chr10 15422169 15422326 -124894439 - L2 LINE L2 -456 2858 2695 6410 206 42 17 chr10 15422422 15422702 -124894063 + L1 LINE L1 3423 3695 -2451 216 97 0 0 chr10 15422702 15422733 -124894032 + (TA)n Simple_repeat Simple_repeat 1 31 0 * 507 17 0 0 chr10 15422732 15422792 -124893973 + (GA)n Simple_repeat Simple_repeat 2 61 0 6410 206 42 17 chr10 15422733 15422792 -124893973 + L1 LINE L1 3695 3751 -2395 1919 115 11 0 chr10 15422792 15423062 -124893703 - AluSx SINE Alu -39 273 1 6410 206 42 17 chr10 15423062 15424268 -124892497 + L1 LINE L1 3747 4948 -1194 565 171 0 0 chr10 15424268 15424373 -124892392 + L1MB3 LINE L1 6075 6179 -4 2128 118 0 10 chr10 15425050 15425356 -124891409 - AluSg SINE Alu -7 303 1 2304 113 0 0 chr10 15425913 15426222 -124890543 + AluSg SINE Alu 1 309 -1 283 304 80 0 chr10 15426241 15426366 -124890399 - MER104 DNA Tc2 -4 176 42 279 0 0 0 chr10 15426646 15426677 -124890088 + (A)n Simple_repeat Simple_repeat 1 31 0 1385 152 76 0 chr10 15427020 15427283 -124889482 + L1MA4 LINE L1 6012 6294 -6 26 30 0 0 chr10 15427290 15427323 -124889442 + AT_rich Low_complexity Low_complexity 1 33 0 697 203 15 0 chr10 15427350 15427483 -124889282 - AluJo SINE Alu -176 136 2 511 294 0 75 chr10 15427587 15427742 -124889023 + MIR SINE MIR 10 140 -122 2153 110 3 0 chr10 15427742 15428034 -124888731 + AluY SINE Alu 1 293 -18 511 294 0 75 chr10 15428034 15428130 -124888635 + MIR SINE MIR 140 242 -20 210 71 0 0 chr10 15432246 15432274 -124884491 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 675 213 100 30 chr10 15432566 15432796 -124883969 - MIR SINE MIR -15 247 2 5597 56 1 0 chr10 15432901 15433581 -124883184 + L1PA6 LINE L1 5463 6143 -11 255 241 213 9 chr10 15433592 15433700 -124883065 + L1MC/D LINE L1 5637 5766 -2042 1484 171 0 33 chr10 15433719 15433994 -124882771 + AluJb SINE Alu 1 266 -46 210 71 0 0 chr10 15434053 15434081 -124882684 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr10 15434180 15434203 -124882562 + AT_rich Low_complexity Low_complexity 1 23 0 2340 168 31 87 chr10 15434245 15434787 -124881978 - MER41C LTR ERV1 0 554 43 564 104 0 0 chr10 15434787 15434864 -124881901 + MER41B LTR ERV1 9 85 -550 585 300 112 58 chr10 15435455 15435657 -124881108 + MLT1K LTR MaLR 24 214 -374 2154 118 11 0 chr10 15435657 15435944 -124880821 + AluSg SINE Alu 1 290 -20 585 300 112 58 chr10 15435944 15436277 -124880488 + MLT1K LTR MaLR 214 588 0 382 218 81 16 chr10 15436562 15436686 -124880079 + HAL1 LINE L1 2204 2335 -172 333 281 71 42 chr10 15436699 15436937 -124879828 + HAL1 LINE L1 2257 2501 -6 249 240 13 27 chr10 15437166 15437241 -124879524 + HAL1 LINE L1 2421 2494 -13 2218 107 3 3 chr10 15438046 15438346 -124878419 + AluSx SINE Alu 1 300 -12 1676 228 119 46 chr10 15438662 15438942 -124877823 - L1MC4 LINE L1 -3 8039 7781 1678 179 10 3 chr10 15438942 15439232 -124877533 - AluJo SINE Alu -18 294 3 1676 228 119 46 chr10 15439232 15439641 -124877124 - L1MC4 LINE L1 -261 7781 7300 203 152 0 0 chr10 15442774 15442807 -124873958 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 675 213 100 30 chr10 15443094 15443324 -124873441 - MIR SINE MIR -15 247 2 5580 57 1 0 chr10 15443429 15444109 -124872656 + L1PA6 LINE L1 5463 6143 -11 255 241 213 9 chr10 15444120 15444228 -124872537 + L1MC/D LINE L1 5637 5766 -2042 1484 171 0 33 chr10 15444247 15444522 -124872243 + AluJb SINE Alu 1 266 -46 210 71 0 0 chr10 15444581 15444609 -124872156 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr10 15444708 15444731 -124872034 + AT_rich Low_complexity Low_complexity 1 23 0 2329 170 31 87 chr10 15444773 15445315 -124871450 - MER41C LTR ERV1 0 554 43 564 104 0 0 chr10 15445315 15445392 -124871373 + MER41B LTR ERV1 9 85 -550 597 300 112 58 chr10 15445983 15446185 -124870580 + MLT1K LTR MaLR 24 214 -374 2177 115 10 0 chr10 15446185 15446473 -124870292 + AluSg SINE Alu 1 291 -19 597 300 112 58 chr10 15446473 15446806 -124869959 + MLT1K LTR MaLR 214 588 0 362 226 81 16 chr10 15447091 15447215 -124869550 + HAL1 LINE L1 2204 2335 -172 319 284 67 42 chr10 15447228 15447467 -124869298 + HAL1 LINE L1 2257 2501 -6 260 257 46 46 chr10 15447662 15447771 -124868994 + HAL1 LINE L1 2386 2494 -13 2391 60 0 60 chr10 15448576 15448895 -124867870 + AluY SINE Alu 1 300 -11 1367 195 164 0 chr10 15449306 15449604 -124867161 + MER7A DNA MER2_type 1 345 -1 2379 96 3 0 chr10 15449663 15449964 -124866801 - AluSx SINE Alu -10 302 1 2242 114 6 13 chr10 15450309 15450624 -124866141 - AluSq SINE Alu 0 313 1 294 196 120 68 chr10 15451388 15451521 -124865244 + HAL1 LINE L1 58 197 -2310 1745 157 14 17 chr10 15451901 15452194 -124864571 - AluJb SINE Alu -5 307 16 1246 183 100 95 chr10 15452203 15452444 -124864321 + L1MD3 LINE L1 6746 6991 -1004 2053 145 0 0 chr10 15452444 15452733 -124864032 + AluSx SINE Alu 1 289 -23 1246 183 100 95 chr10 15452733 15452901 -124863864 + L1MD3 LINE L1 6991 7157 -838 1299 243 122 32 chr10 15453025 15453494 -124863271 - LTR33 LTR ERVL -1 520 10 787 227 0 0 chr10 15453954 15454117 -124862648 - FRAM SINE Alu -10 166 4 361 331 8 8 chr10 15454445 15454572 -124862193 + MIR SINE MIR 21 147 -61 213 273 0 136 chr10 15455478 15455568 -124861197 - L2 LINE L2 -226 3046 2984 2230 126 30 30 chr10 15455568 15455932 -124860833 - THE1B LTR MaLR 0 364 1 213 273 0 136 chr10 15455932 15455995 -124860770 - L2 LINE L2 -288 2984 2914 1369 179 44 44 chr10 15456573 15456869 -124859896 + AluJb SINE Alu 1 296 -16 1541 221 60 12 chr10 15456870 15457272 -124859493 - L1ME1 LINE L1 -15 6151 5731 * 1741 183 20 17 chr10 15457269 15457625 -124859140 - L1ME1 LINE L1 -1200 4946 4590 1158 260 66 55 chr10 15457693 15458033 -124858732 - MER74B LTR ERVL -83 539 191 2120 125 3 10 chr10 15458033 15458328 -124858437 + AluSx SINE Alu 1 293 -19 1158 260 66 55 chr10 15458328 15458456 -124858309 - MER74B LTR ERVL -431 191 66 795 189 63 17 chr10 15458512 15458687 -124858078 + MLT1D LTR MaLR 9 191 -314 2375 95 3 0 chr10 15458747 15459051 -124857714 + AluSp SINE Alu 1 305 -8 2732 20 0 0 chr10 15459150 15459447 -124857318 + AluYa5 SINE Alu 1 297 -14 10636 27 1 0 chr10 15459572 15461575 -124855190 + L1PA4 LINE L1 4151 6153 -2 21 71 0 0 chr10 15461879 15461921 -124854844 + AT_rich Low_complexity Low_complexity 1 42 0 708 188 61 1 chr10 15461961 15462121 -124854644 + MLT1A1 LTR MaLR 214 365 0 321 151 0 0 chr10 15462309 15462362 -124854403 - Alu SINE Alu 0 301 249 269 64 5 101 chr10 15463127 15463218 -124853547 - Alu SINE Alu -250 52 1 2356 93 0 3 chr10 15463282 15463583 -124853182 + AluSg SINE Alu 1 300 -10 2547 47 7 0 chr10 15463874 15464173 -124852592 + AluY SINE Alu 1 301 -10 2176 115 10 0 chr10 15464750 15465045 -124851720 - AluSx SINE Alu -14 298 1 435 344 26 10 chr10 15465145 15465340 -124851425 + MIR SINE MIR 50 247 -15 3616 163 18 70 chr10 15465705 15466471 -124850294 + L1PB3 LINE L1 5421 6146 -8 2023 129 23 3 chr10 15466788 15467090 -124849675 - AluSq SINE Alu -5 308 1 251 158 0 0 chr10 15467564 15467602 -124849163 - U2 snRNA snRNA -150 38 1 186 133 0 0 chr10 15467609 15467639 -124849126 + (CATATA)n Simple_repeat Simple_repeat 2 31 0 1929 137 14 0 chr10 15467639 15467931 -124848834 - AluJo SINE Alu -16 296 1 5159 198 75 71 chr10 15467940 15468295 -124848470 - L1MC4 LINE L1 -1 8041 7689 866 148 0 15 chr10 15468295 15468430 -124848335 - FLAM_C SINE Alu 0 133 1 5159 198 75 71 chr10 15468430 15468719 -124848046 - L1MC4 LINE L1 -353 7689 7402 2214 84 3 11 chr10 15468719 15469025 -124847740 + AluSg SINE Alu 1 304 0 5159 198 75 71 chr10 15469025 15469946 -124846819 - L1MC4 LINE L1 -640 7402 6469 232 337 24 0 chr10 15470137 15470220 -124846545 + MIR SINE MIR 32 116 -146 227 241 48 72 chr10 15470498 15470581 -124846184 + MIR SINE MIR 117 197 -65 1122 166 111 70 chr10 15470728 15470999 -124845766 + AluJo SINE Alu 24 305 -7 258 286 0 31 chr10 15471006 15471104 -124845661 - L1ME4a LINE L1 -66 6055 5961 325 281 55 20 chr10 15472204 15472350 -124844415 - L2 LINE L2 -1808 1506 1356 721 206 0 14 chr10 15472352 15472498 -124844267 + FRAM SINE Alu 27 170 -6 1286 262 171 19 chr10 15472721 15473470 -124843295 + L2 LINE L2 972 1834 -1480 1581 157 29 32 chr10 15473491 15473804 -124842961 - AluJo SINE Alu 0 312 1 4438 173 44 9 chr10 15474188 15475415 -124841350 - L1MB1 LINE L1 -124 6044 4765 2232 124 0 3 chr10 15475415 15475713 -124841052 - AluSx SINE Alu -15 297 1 4438 173 44 9 chr10 15475713 15475970 -124840795 - L1MB1 LINE L1 -1403 4765 4518 1942 143 0 10 chr10 15476448 15476741 -124840024 - AluJb SINE Alu -22 290 1 2176 121 0 7 chr10 15476762 15477069 -124839696 - AluSx SINE Alu -7 305 1 2222 110 19 50 chr10 15477221 15477638 -124839127 + MER11C LTR ERVK 668 1071 0 988 206 149 36 chr10 15477638 15477973 -124838792 + L1ME2 LINE L1 5674 6046 -118 2084 110 3 16 chr10 15478998 15479306 -124837459 + AluSx SINE Alu 1 304 -8 374 147 54 12 chr10 15479638 15479753 -124837012 - Alu SINE Alu -8 293 228 282 294 4 35 chr10 15480130 15480264 -124836501 + CT-rich Low_complexity Low_complexity 1 129 0 638 99 0 22 chr10 15480556 15480647 -124836118 + AluJb SINE Alu 200 288 -24 22 70 0 0 chr10 15481174 15481217 -124835548 + GC_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr10 15481273 15481301 -124835464 + GC_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr10 15481442 15481472 -124835293 + GC_rich Low_complexity Low_complexity 1 30 0 1019 156 72 0 chr10 15481961 15482141 -124834624 + AluSg/x SINE Alu 108 300 -12 1008 238 14 5 chr10 15482640 15482850 -124833915 + MER58A DNA MER1_type 3 214 -10 373 295 32 32 chr10 15482913 15483069 -124833696 + L2 LINE L2 3158 3313 0 301 205 256 0 chr10 15483797 15483875 -124832890 - AluJ/FLAM SINE Alu -204 98 1 969 228 112 0 chr10 15483879 15484120 -124832645 - Charlie1b DNA MER1_type -255 268 1 205 289 79 0 chr10 15484345 15484421 -124832344 - L2 LINE L2 -266 3047 2966 459 227 16 23 chr10 15484464 15484592 -124832173 + L2 LINE L2 3167 3293 -20 583 255 89 46 chr10 15484733 15485035 -124831730 - L2 LINE L2 -945 2369 2055 7423 36 11 0 chr10 15486130 15487742 -124829023 + L1PA5 LINE L1 4520 6146 -8 23 0 0 0 chr10 15487742 15487765 -124829000 + AT_rich Low_complexity Low_complexity 1 23 0 1061 141 0 65 chr10 15487832 15488017 -124828748 - FRAM SINE Alu -10 166 1 470 299 12 102 chr10 15488023 15488267 -124828498 - MLT1B LTR MaLR -90 300 79 28 0 0 0 chr10 15488865 15488893 -124827872 + AT_rich Low_complexity Low_complexity 1 28 0 232 269 76 35 chr10 15488900 15489097 -124827668 + L1M4 LINE L1 3775 3979 -2167 1687 122 8 16 chr10 15489098 15489343 -124827422 + AluJb SINE Alu 1 243 -69 1538 128 92 29 chr10 15489482 15489716 -124827049 + MSTA LTR MaLR 139 394 -34 2254 109 3 0 chr10 15489716 15490018 -124826747 - AluSx SINE Alu -9 303 1 1538 128 92 29 chr10 15490018 15490056 -124826709 + MSTA LTR MaLR 394 428 0 593 97 0 43 chr10 15490057 15490150 -124826615 - MER2 DNA MER2_type -162 183 95 1010 125 26 0 chr10 15491027 15491179 -124825586 + AluSg/x SINE Alu 140 295 -17 477 138 30 22 chr10 15491741 15491844 -124824921 - L1P5 LINE L1 -396 5758 5652 198 71 0 0 chr10 15491845 15491873 -124824892 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2135 133 3 0 chr10 15491878 15492180 -124824585 + AluSx SINE Alu 4 306 -6 2120 129 7 7 chr10 15492394 15492703 -124824062 + AluSx SINE Alu 1 309 -3 1825 186 0 0 chr10 15493034 15493340 -124823425 - AluJo SINE Alu -5 307 2 532 189 83 8 chr10 15493400 15493532 -124823233 - L1ME3 LINE L1 -1 6161 6020 403 175 0 0 chr10 15494769 15494832 -124821933 - MER2 DNA MER2_type -4 341 279 2498 77 0 6 chr10 15494878 15495191 -124821574 + AluY SINE Alu 1 311 0 2178 77 14 3 chr10 15495226 15495511 -124821254 + AluY SINE Alu 1 288 -23 430 243 14 64 chr10 15495556 15495830 -124820935 + MER46C DNA MER2_type 6 338 0 1976 103 7 4 chr10 15495889 15496160 -124820605 - AluSx SINE Alu -40 272 1 584 198 60 82 chr10 15496360 15496542 -124820223 - MER5B DNA MER1_type 0 178 1 2425 87 55 63 chr10 15497425 15497792 -124818973 + MER51A LTR ERV1 1 364 -270 251 82 82 61 chr10 15497944 15497993 -124818772 + MLT1J LTR MaLR 393 442 -69 2611 144 13 27 chr10 15498074 15498371 -124818394 + MER65A LTR ERV1 1 291 -154 2077 114 0 29 chr10 15498371 15498677 -124818088 - AluSx SINE Alu -15 297 1 2611 144 13 27 chr10 15498677 15498830 -124817935 + MER65A LTR ERV1 291 445 0 474 206 10 0 chr10 15498888 15498990 -124817775 + MER5A DNA MER1_type 9 111 -78 2366 111 5 37 chr10 15499045 15499424 -124817341 - L1PB3 LINE L1 -1 6153 5787 2242 94 0 13 chr10 15499455 15499764 -124817001 - AluY SINE Alu -6 305 1 611 126 0 1 chr10 15500225 15500609 -124816156 + AluSx SINE Alu 1 430 0 207 0 0 0 chr10 15500612 15500635 -124816130 + (CAG)n Simple_repeat Simple_repeat 3 25 0 741 165 0 0 chr10 15500635 15500884 -124815881 + GA-rich Low_complexity Low_complexity 1 249 0 716 116 0 23 chr10 15500892 15501064 -124815701 + (GAA)n Simple_repeat Simple_repeat 3 170 0 579 266 133 14 chr10 15501180 15501398 -124815367 - MIR SINE MIR -17 245 2 1677 132 20 66 chr10 15501448 15501751 -124815014 + AluJb SINE Alu 1 289 -23 30 59 0 0 chr10 15501961 15502012 -124814753 + AT_rich Low_complexity Low_complexity 1 51 0 2079 143 3 0 chr10 15502125 15502425 -124814340 + AluSx SINE Alu 1 301 -11 2133 122 3 3 chr10 15502881 15503177 -124813588 + AluSc SINE Alu 1 296 -13 21 0 0 0 chr10 15504284 15504305 -124812460 + AT_rich Low_complexity Low_complexity 1 21 0 2256 89 7 10 chr10 15507228 15507530 -124809235 - AluSq SINE Alu -12 301 1 4347 149 57 34 chr10 15507705 15507788 -124808977 - L1MB8 LINE L1 0 6178 6098 2510 81 0 0 chr10 15507788 15508096 -124808669 + AluSx SINE Alu 3 310 -2 4347 149 57 34 chr10 15508096 15508982 -124807783 - L1MB8 LINE L1 -80 6098 5190 597 301 27 0 chr10 15509120 15509303 -124807462 + MIR SINE MIR 31 218 -44 2086 80 33 23 chr10 15510502 15510802 -124805963 + AluSx SINE Alu 1 303 -9 36 53 0 0 chr10 15511225 15511282 -124805483 + AT_rich Low_complexity Low_complexity 1 57 0 322 220 25 85 chr10 15512018 15512136 -124804629 - MIR SINE MIR -46 216 106 833 174 21 47 chr10 15512594 15512784 -124803981 - L1MD1 LINE L1 0 6242 6058 463 176 146 67 chr10 15515337 15515502 -124801263 + MIR SINE MIR 39 216 -46 23 0 0 0 chr10 15515918 15515941 -124800824 + AT_rich Low_complexity Low_complexity 1 23 0 412 191 0 0 chr10 15516794 15516878 -124799887 - AluS SINE Alu -1 308 225 268 95 0 0 chr10 15516978 15517017 -124799748 - Alu SINE Alu -267 35 1 194 233 27 68 chr10 15517020 15517093 -124799672 + MIR3 SINE MIR 118 187 -21 207 0 0 0 chr10 15517376 15517399 -124799366 + (TAGG)n Simple_repeat Simple_repeat 1 23 0 395 290 7 39 chr10 15517712 15517867 -124798898 + MIR SINE MIR 63 212 -50 304 311 47 9 chr10 15518588 15518694 -124798071 + MIR3 SINE MIR 4 113 -95 228 265 170 41 chr10 15519075 15519222 -124797543 + MIR SINE MIR 47 212 -50 27 62 0 0 chr10 15519893 15519941 -124796824 + AT_rich Low_complexity Low_complexity 1 48 0 207 393 28 14 chr10 15520142 15520287 -124796478 + MIR3 SINE MIR 16 162 -46 1916 136 13 30 chr10 15521136 15521437 -124795328 + AluSx SINE Alu 1 296 -16 215 375 77 0 chr10 15521858 15521962 -124794803 - L2 LINE L2 -5 3267 3156 336 374 56 17 chr10 15523312 15523491 -124793274 + MIR3 SINE MIR 10 195 -13 685 176 52 0 chr10 15525383 15525519 -124791246 - MER3 DNA MER1_type 0 209 67 195 114 0 0 chr10 15526396 15526431 -124790334 + (TG)n Simple_repeat Simple_repeat 2 36 0 803 200 59 106 chr10 15526793 15527048 -124789717 - MIR SINE MIR -18 244 2 1774 170 13 3 chr10 15527174 15527474 -124789291 + AluJb SINE Alu 1 303 -9 595 324 115 34 chr10 15527613 15528239 -124788526 - L1MC4a LINE L1 -1878 5930 5254 638 254 20 46 chr10 15529335 15529532 -124787233 - MIR SINE MIR -51 211 20 376 339 138 43 chr10 15529596 15529944 -124786821 - HAL1 LINE L1 -1837 670 290 243 271 46 80 chr10 15530009 15530160 -124786605 - HAL1 LINE L1 -2341 166 21 323 261 328 5 chr10 15530198 15530393 -124786372 - L1ME LINE L1 -303 5818 5561 360 294 206 23 chr10 15530477 15530831 -124785934 - L1ME LINE L1 -1496 4650 4232 1177 268 144 30 chr10 15530848 15531849 -124784916 - L2 LINE L2 0 3313 1726 1505 154 61 0 chr10 15531962 15532208 -124784557 - AluJo SINE Alu -51 261 1 2309 92 0 0 chr10 15532329 15532624 -124784141 + AluSc SINE Alu 1 295 -14 502 108 48 0 chr10 15532628 15532711 -124784054 - AluSg/x SINE Alu -14 295 209 225 0 0 0 chr10 15535019 15535044 -124781721 + (CA)n Simple_repeat Simple_repeat 1 25 0 1815 71 4 0 chr10 15535359 15535584 -124781181 - AluY SINE Alu -7 304 79 357 82 0 0 chr10 15535714 15535763 -124781002 + (TG)n Simple_repeat Simple_repeat 2 50 0 2176 119 7 7 chr10 15535791 15536093 -124780672 - AluSx SINE Alu -10 302 1 232 206 135 76 chr10 15536416 15536558 -124780207 - MIR SINE MIR -28 180 35 283 114 0 0 chr10 15539036 15539080 -124777685 + Alu SINE Alu 253 296 -6 813 191 198 0 chr10 15539371 15539533 -124777232 + AluJo SINE Alu 1 194 -118 483 308 49 51 chr10 15539598 15539662 -124777103 - L1MEd LINE L1 -5284 835 772 2057 125 23 3 chr10 15539662 15539965 -124776800 - AluSx SINE Alu -3 309 1 483 308 49 51 chr10 15539965 15540290 -124776475 - L1MEd LINE L1 -5347 772 447 385 360 16 45 chr10 15540396 15540606 -124776159 - L1MEd LINE L1 -5305 814 618 2447 97 0 0 chr10 15540606 15540917 -124775848 + AluSq SINE Alu 1 311 -2 385 360 16 45 chr10 15540917 15541087 -124775678 - L1MEd LINE L1 -5501 618 445 521 164 16 16 chr10 15541505 15541625 -124775140 + (TA)n Simple_repeat Simple_repeat 2 124 -5 2103 110 0 10 chr10 15541625 15541916 -124774849 - AluSc SINE Alu -21 288 1 521 164 16 16 chr10 15541916 15541923 -124774842 + (TA)n Simple_repeat Simple_repeat 123 129 0 2051 270 74 28 chr10 15541976 15542888 -124773877 - L2 LINE L2 0 3313 2358 2252 118 3 6 chr10 15542888 15543201 -124773564 - AluSx SINE Alu 0 312 1 2051 270 74 28 chr10 15543201 15543235 -124773530 - L2 LINE L2 -955 2358 2327 1168 219 16 39 chr10 15543236 15543547 -124773218 + MLT2D LTR ERVL 68 371 -43 294 98 0 0 chr10 15543604 15543645 -124773120 + MLT2D LTR ERVL 480 520 0 968 280 69 15 chr10 15543645 15543977 -124772788 - L2 LINE L2 -995 2319 1970 1901 181 3 3 chr10 15544101 15544411 -124772354 + AluSx SINE Alu 1 310 -2 335 238 75 0 chr10 15544656 15544736 -124772029 - L2 LINE L2 0 3272 3187 224 315 192 35 chr10 15544814 15545529 -124771236 - L2 LINE L2 -549 2765 1939 28 29 0 0 chr10 15545704 15545739 -124771026 + AT_rich Low_complexity Low_complexity 1 35 0 675 294 55 46 chr10 15545815 15546142 -124770623 - MER102b DNA MER1_type -1 340 11 2086 128 13 0 chr10 15546692 15546998 -124769767 + AluSx SINE Alu 1 310 -2 202 296 0 0 chr10 15549051 15549105 -124767660 + L2 LINE L2 2798 2851 -463 380 235 47 0 chr10 15549144 15549229 -124767536 - L2 LINE L2 -5 3267 3179 189 361 73 79 chr10 15549243 15549584 -124767181 + L2 LINE L2 2899 3237 -35 494 346 75 61 chr10 15549721 15550001 -124766764 - L2 LINE L2 -4 3268 2985 205 357 62 36 chr10 15550050 15550274 -124766491 - L2 LINE L2 -518 2796 2567 490 337 99 40 chr10 15550698 15551270 -124765495 - L2 LINE L2 -1 3271 2650 189 271 205 74 chr10 15551284 15551418 -124765347 - L2 LINE L2 -1132 2182 2067 2331 93 0 7 chr10 15551418 15551719 -124765046 + AluSc SINE Alu 1 299 -10 189 271 205 74 chr10 15551719 15551886 -124764879 - L2 LINE L2 -1247 2067 1923 2338 81 7 3 chr10 15551886 15552184 -124764581 + AluSp SINE Alu 1 299 -14 189 271 205 74 chr10 15552184 15552261 -124764504 - L2 LINE L2 -1391 1923 1753 216 188 325 0 chr10 15552509 15552589 -124764176 - L2 LINE L2 -1606 1708 1603 324 298 23 30 chr10 15552680 15552811 -124763954 - L2 LINE L2 -1891 1423 1294 1490 172 107 0 chr10 15553467 15553729 -124763036 - AluJb SINE Alu -22 290 1 413 326 159 41 chr10 15554177 15554968 -124761797 - L2 LINE L2 -208 3064 2174 1745 96 4 35 chr10 15555881 15556055 -124760710 - AluSg SINE Alu -14 296 131 2620 22 6 13 chr10 15556055 15556367 -124760398 - AluY SINE Alu -1 310 1 1745 96 4 35 chr10 15556367 15556452 -124760313 - AluSg SINE Alu -179 131 45 2849 10 0 0 chr10 15557420 15557731 -124759034 - AluY SINE Alu 0 311 1 2229 99 10 10 chr10 15558227 15558540 -124758225 - AluSq SINE Alu 0 313 1 978 180 71 86 chr10 15558769 15558994 -124757771 - MER33 DNA MER1_type -2262 323 103 2119 121 3 6 chr10 15558994 15559307 -124757458 - AluSx SINE Alu 0 312 1 978 180 71 86 chr10 15559307 15559420 -124757345 - MER33 DNA MER1_type -2482 103 1 186 43 0 0 chr10 15561148 15561171 -124755594 + (TA)n Simple_repeat Simple_repeat 1 23 0 478 265 68 104 chr10 15561180 15561429 -124755336 - MIR SINE MIR -21 241 2 1557 169 8 8 chr10 15562130 15562396 -124754369 + AluJo SINE Alu 26 291 -21 382 242 75 38 chr10 15563363 15563549 -124753216 + L1MC5 LINE L1 7724 7916 -45 270 238 170 20 chr10 15563895 15564042 -124752723 - MIR3 SINE MIR -7 201 33 1041 118 0 0 chr10 15615025 15615161 -124701604 + AluSq/x SINE Alu 1 136 -176 676 211 0 0 chr10 15615681 15615790 -124700975 - MER68 LTR ERV1 -1 561 453 1690 219 60 58 chr10 15615792 15616295 -124700470 - MER77 LTR ERV1 0 605 102 1227 144 3 1 chr10 15616606 15617773 -124698992 - ALR/Alpha Satellite centromeric 0 1169 1 1082 184 107 157 chr10 15617876 15618418 -124698347 + L1M2a LINE L1 372 886 -6282 4230 189 25 5 chr10 15618418 15619181 -124697584 + L1M2a LINE L1 642 1419 -5749 456 245 10 0 chr10 15619281 15619379 -124697386 + MER82 DNA MER2_type 554 652 -1 1818 132 20 37 chr10 15619670 15619965 -124696800 + AluSg SINE Alu 1 290 -20 292 293 116 43 chr10 15620020 15620348 -124696417 + L1M4 LINE L1 4456 4807 -1339 2124 131 0 0 chr10 15620483 15620774 -124695991 + AluSx SINE Alu 1 291 -21 24 53 0 0 chr10 15620957 15620995 -124695770 + AT_rich Low_complexity Low_complexity 1 38 0 2051 135 0 14 chr10 15621386 15621683 -124695082 + AluSx SINE Alu 1 293 -19 274 279 90 53 chr10 15621800 15622334 -124694431 - L1MEd LINE L1 -4550 1579 1037 1993 157 0 3 chr10 15622578 15622883 -124693882 - AluSx SINE Alu -8 304 1 261 243 54 14 chr10 15622945 15623019 -124693746 - MIR SINE MIR -45 217 141 753 283 26 11 chr10 15623139 15623330 -124693435 - MER58A DNA MER1_type -30 194 1 3735 307 56 58 chr10 15623332 15623643 -124693122 - ERVL LTR ERVL -3056 2708 2398 328 161 0 36 chr10 15623643 15623699 -124693066 + 7SK RNA RNA 5 58 -135 3735 307 56 58 chr10 15623699 15624806 -124691959 - ERVL LTR ERVL -3366 2398 1162 925 191 22 78 chr10 15624806 15624892 -124691873 + MER20 DNA MER1_type 1 90 -129 243 61 0 0 chr10 15624892 15624925 -124691840 + (TG)n Simple_repeat Simple_repeat 1 33 0 925 191 22 78 chr10 15624925 15625069 -124691696 + MER20 DNA MER1_type 90 218 -1 3735 307 56 58 chr10 15625069 15625654 -124691111 - ERVL LTR ERVL -4602 1162 578 1154 208 4 17 chr10 15625887 15626118 -124690647 - AluJb SINE Alu -20 292 65 2254 82 7 10 chr10 15627968 15628261 -124688504 + AluSg1 SINE Alu 1 292 -17 454 278 8 38 chr10 15628262 15628395 -124688370 + ERVL LTR ERVL 2900 3028 -2736 9327 206 63 26 chr10 15628422 15631884 -124684881 - L1MB2 LINE L1 -8 6163 2555 559 190 0 22 chr10 15632015 15632199 -124684566 + (TA)n Simple_repeat Simple_repeat 1 180 0 1158 179 85 0 chr10 15632199 15632423 -124684342 - AluJo SINE Alu -26 286 44 24 0 0 0 chr10 15632543 15632567 -124684198 + AT_rich Low_complexity Low_complexity 1 24 0 2102 103 34 0 chr10 15633181 15633473 -124683292 + AluSx SINE Alu 1 302 -10 2250 123 0 0 chr10 15634089 15634391 -124682374 - AluSx SINE Alu -10 302 1 270 285 91 24 chr10 15634391 15634556 -124682209 + L1ME LINE L1 5641 5816 -305 868 224 128 9 chr10 15634592 15634811 -124681954 - MIR SINE MIR -2 260 16 626 195 0 0 chr10 15635371 15635484 -124681281 - MER20 DNA MER1_type 0 219 107 261 200 200 21 chr10 15635650 15635745 -124681020 - MER112 DNA MER1_type -11 249 138 11229 158 25 41 chr10 15636368 15638076 -124678689 + L1MA4 LINE L1 2942 4676 -1624 2242 97 0 3 chr10 15638076 15638366 -124678399 + AluY SINE Alu 1 289 -22 11229 158 25 41 chr10 15638366 15638377 -124678388 + L1MA4 LINE L1 4676 4686 -1614 315 0 0 0 chr10 15638377 15638412 -124678353 + (TTTAA)n Simple_repeat Simple_repeat 3 37 0 11229 158 25 41 chr10 15638412 15639700 -124677065 + L1MA4 LINE L1 4686 5899 -401 6201 204 82 62 chr10 15639801 15641024 -124675741 - MER4-int LTR ERV1 -239 5094 3897 2354 52 0 7 chr10 15641024 15641330 -124675435 - AluY SINE Alu 0 304 1 6201 204 82 62 chr10 15641330 15642733 -124674032 - MER4-int LTR ERV1 -1436 3897 2451 487 168 19 123 chr10 15642814 15642969 -124673796 - MER4-int LTR ERV1 -2866 3732 3594 243 135 27 14 chr10 15642971 15643045 -124673720 + GA-rich Low_complexity Low_complexity 1 75 0 311 282 136 0 chr10 15644489 15644592 -124672173 - L2 LINE L2 -10 3303 3187 3457 34 10 0 chr10 15646411 15646829 -124669936 + L1PA3 LINE L1 5731 6152 -3 5648 31 1 1 chr10 15647033 15647738 -124669027 + L1PA4 LINE L1 5476 6155 0 2089 132 3 0 chr10 15648305 15648600 -124668165 + AluSq SINE Alu 1 296 -17 419 374 95 0 chr10 15649730 15649909 -124666856 - MER91A DNA MER1_type 0 196 1 641 239 25 61 chr10 15649969 15650166 -124666599 + MIR SINE MIR 28 217 -45 2032 145 0 3 chr10 15650228 15650532 -124666233 + AluSx SINE Alu 1 303 -9 313 298 105 0 chr10 15651359 15651473 -124665292 + L2 LINE L2 3187 3312 -1 22 0 0 0 chr10 15652701 15652723 -124664042 + AT_rich Low_complexity Low_complexity 1 22 0 1782 267 95 29 chr10 15653492 15655117 -124661648 + L1MCc LINE L1 877 2802 -4320 7097 176 42 12 chr10 15655159 15656888 -124659877 + L1M3f LINE L1 6 1777 -4065 1374 129 20 5 chr10 15657088 15657290 -124659475 - AluSq SINE Alu -106 207 3 988 160 13 0 chr10 15657295 15657445 -124659320 - FRAM SINE Alu -14 152 1 823 305 35 29 chr10 15657968 15658342 -124658423 + L1MC4a LINE L1 6456 6831 -977 2210 230 101 46 chr10 15658366 15658990 -124657775 + L1MC4 LINE L1 7086 7776 -266 1742 182 3 0 chr10 15658990 15659281 -124657484 + AluJo SINE Alu 3 294 -18 2210 230 101 46 chr10 15659281 15659561 -124657204 + L1MC4 LINE L1 7776 8039 -3 2270 97 0 3 chr10 15659877 15660175 -124656590 - AluSc SINE Alu -12 297 1 386 273 121 93 chr10 15663500 15663789 -124652976 + MER21B LTR ERV1 410 706 -157 2006 104 11 0 chr10 15664421 15664681 -124652084 + AluSg SINE Alu 1 263 -47 1590 142 35 16 chr10 15664683 15664937 -124651828 + AluSx SINE Alu 38 296 -16 1033 211 166 24 chr10 15664988 15665097 -124651668 - AluJo SINE Alu -30 282 190 234 0 0 0 chr10 15665097 15665123 -124651642 + (TA)n Simple_repeat Simple_repeat 2 27 0 1033 211 166 24 chr10 15665123 15665260 -124651505 - AluJo SINE Alu -122 190 1 923 296 86 57 chr10 15665318 15665735 -124651030 - L2 LINE L2 -188 3125 2686 1880 174 7 7 chr10 15665735 15666040 -124650725 + AluJo SINE Alu 1 305 -7 923 296 86 57 chr10 15666040 15666176 -124650589 - L2 LINE L2 -627 2686 2555 21161 97 8 5 chr10 15667051 15670930 -124645835 + L1PA7 LINE L1 2264 6154 0 4103 233 83 32 chr10 15670942 15671900 -124644865 + L1M4 LINE L1 2 910 -5736 973 255 118 19 chr10 15671900 15672323 -124644442 - MLT1C LTR MaLR -2 465 1 4103 233 83 32 chr10 15672323 15673257 -124643508 + L1M4 LINE L1 910 1949 -4697 1461 217 13 19 chr10 15673438 15673752 -124643013 - AluJo SINE Alu 0 312 1 483 195 56 87 chr10 15673773 15674028 -124642737 - MER65A-int LTR ERV1 -2894 2809 1701 880 234 6 40 chr10 15674033 15674542 -124642223 - MER65A-int LTR ERV1 -4279 592 57 1941 146 55 23 chr10 15674587 15674971 -124641794 - MER65A LTR ERV1 0 445 50 2684 304 44 7 chr10 15674971 15675949 -124640816 + ERVL LTR ERVL 3588 4601 -1163 332 102 43 24 chr10 15676016 15676110 -124640655 + MLT2F LTR ERVL 530 661 -2 582 235 44 20 chr10 15676122 15676326 -124640439 - L1ME3A LINE L1 -155 6015 5807 774 241 48 5 chr10 15676364 15676571 -124640194 - L1ME3A LINE L1 -468 5694 5479 28 0 0 0 chr10 15676571 15676599 -124640166 + AT_rich Low_complexity Low_complexity 1 28 0 427 180 45 9 chr10 15676615 15676726 -124640039 + L1MA8 LINE L1 5952 6066 -225 699 281 112 23 chr10 15676753 15677596 -124639169 - L1ME3A LINE L1 -728 5442 4519 348 230 79 8 chr10 15677606 15677732 -124639033 - L1ME3A LINE L1 -1 6169 6035 509 328 57 16 chr10 15677732 15677924 -124638841 + LTR16B LTR ERVL 1 200 -264 2163 118 10 0 chr10 15677979 15678275 -124638490 - AluSx SINE Alu -13 299 1 1262 152 0 5 chr10 15678332 15678564 -124638201 - AluJb SINE Alu 0 316 86 2091 113 10 3 chr10 15678695 15679006 -124637759 - AluSp SINE Alu 0 313 1 750 295 60 0 chr10 15679039 15679354 -124637411 - L1ME3A LINE L1 -131 6039 5706 1995 118 0 0 chr10 15679469 15679741 -124637024 - AluSx SINE Alu -40 272 1 1005 187 64 0 chr10 15680104 15680307 -124636458 - MER20 DNA MER1_type 0 219 4 2194 106 7 7 chr10 15680821 15681124 -124635641 - AluSx SINE Alu -9 303 1 483 230 36 50 chr10 15681230 15681369 -124635396 + MIR SINE MIR 1 137 -125 720 140 0 0 chr10 15681396 15681503 -124635262 + FRAM SINE Alu 42 148 -28 2154 111 0 10 chr10 15681523 15681820 -124634945 + AluSx SINE Alu 1 294 -18 371 241 24 0 chr10 15681843 15681926 -124634839 + MIR SINE MIR 164 248 -14 39302 38 3 5 chr10 15682145 15687189 -124629576 + L1P LINE L1 2 5036 -1110 2212 139 0 0 chr10 15687528 15687838 -124628927 - AluSx SINE Alu -2 310 1 946 268 108 44 chr10 15688045 15688627 -124628138 + L1ME1 LINE L1 1381 1924 -4291 311 43 21 0 chr10 15688627 15688674 -124628091 + L1PB1 LINE L1 6101 6148 -3 946 268 108 44 chr10 15688674 15688775 -124627990 + L1ME1 LINE L1 1924 2017 -4198 1133 194 44 4 chr10 15688775 15689002 -124627763 + MER46A DNA MER2_type 1 236 0 946 268 108 44 chr10 15689002 15689240 -124627525 + L1ME1 LINE L1 2017 2421 -3794 2496 72 0 3 chr10 15689261 15689567 -124627198 + AluY SINE Alu 1 305 -6 1319 244 113 22 chr10 15689568 15690286 -124626479 + L1ME1 LINE L1 2392 3197 -3018 775 177 0 8 chr10 15690286 15690416 -124626349 + FLAM_C SINE Alu 2 130 -3 1319 244 113 22 chr10 15690416 15690525 -124626240 + L1ME1 LINE L1 3197 3295 -2920 1277 113 166 39 chr10 15690586 15690815 -124625950 + AluSg SINE Alu 1 258 -52 324 0 0 0 chr10 15690817 15690853 -124625912 + (CA)n Simple_repeat Simple_repeat 2 37 0 1561 235 63 22 chr10 15690855 15691438 -124625327 + L1ME1 LINE L1 3383 3989 -2226 2937 201 103 71 chr10 15691454 15692250 -124624515 + L1ME1 LINE L1 4225 4994 -1241 2576 52 0 0 chr10 15692250 15692555 -124624210 + AluY SINE Alu 1 305 -6 2937 201 103 71 chr10 15692555 15693070 -124623695 + L1ME1 LINE L1 4994 5491 -744 2037 131 0 3 chr10 15693070 15693368 -124623397 + AluSg SINE Alu 1 297 -13 579 157 35 9 chr10 15693377 15693492 -124623273 + L1MA4 LINE L1 6177 6294 -6 2937 201 103 71 chr10 15693492 15694105 -124622660 + L1ME1 LINE L1 5498 6225 -10 1464 152 23 19 chr10 15694240 15694497 -124622268 - AluJo SINE Alu -52 260 3 927 89 279 6 chr10 15694809 15694988 -124621777 + MER30 DNA MER1_type 3 230 0 330 305 55 49 chr10 15695172 15695336 -124621429 + MIR SINE MIR 10 174 -88 764 210 151 0 chr10 15695544 15695730 -124621035 - MER58C DNA MER1_type 0 215 2 390 302 206 20 chr10 15695790 15696006 -124620759 - MIR SINE MIR 0 262 15 918 173 37 0 chr10 15696010 15696172 -124620593 - AluSq SINE Alu 0 313 146 811 184 0 0 chr10 15696283 15696451 -124620314 + L1MA4 LINE L1 6085 6252 -48 261 309 49 0 chr10 15696500 15696623 -124620142 - L1ME LINE L1 -295 5826 5698 342 214 0 0 chr10 15696990 15697060 -124619705 + L1MC3 LINE L1 6280 6349 -1436 237 234 0 16 chr10 15697065 15697129 -124619636 + L1ME LINE L1 695 757 -5313 2267 93 3 7 chr10 15697292 15697583 -124619182 + AluSg SINE Alu 1 290 -20 515 186 57 31 chr10 15697619 15697812 -124618953 - L1 LINE L1 -2873 3273 3076 1052 208 24 47 chr10 15698275 15698482 -124618283 - L1ME LINE L1 -593 5581 5382 3300 127 20 8 chr10 15698482 15698971 -124617794 - LTR42 LTR ERVL 0 495 1 1052 208 24 47 chr10 15698971 15699061 -124617704 - L1ME LINE L1 -792 5382 5291 439 324 44 17 chr10 15699485 15699660 -124617105 + L1ME LINE L1 5291 5460 -702 2191 129 7 0 chr10 15699660 15699970 -124616795 - AluSx SINE Alu 0 312 1 439 324 44 17 chr10 15699970 15700223 -124616542 + L1ME LINE L1 5460 5739 -423 29 78 0 0 chr10 15700539 15700603 -124616162 + AT_rich Low_complexity Low_complexity 1 64 0 300 200 0 0 chr10 15700804 15700864 -124615901 - LTR16A LTR ERVL 0 450 391 * 4375 127 1 11 chr10 15700863 15701421 -124615344 + Tigger1 DNA MER2_type 1699 2250 -168 2382 48 34 3 chr10 15701421 15701712 -124615053 - AluY SINE Alu 0 311 12 4375 127 1 11 chr10 15701712 15701877 -124614888 + Tigger1 DNA MER2_type 2250 2415 -3 1446 186 3 54 chr10 15701905 15702201 -124614564 + AluJo SINE Alu 11 291 -21 660 283 69 73 chr10 15702260 15702836 -124613929 - MER21B LTR ERV1 -157 706 133 259 261 36 80 chr10 15702859 15702997 -124613768 - MER77 LTR ERV1 -408 197 66 3208 147 63 38 chr10 15703208 15703483 -124613282 + LTR34 LTR ERV1 1 268 -431 1664 214 80 89 chr10 15703483 15703642 -124613123 + LTR8 LTR ERV1 1 160 -531 2766 3 0 3 chr10 15703642 15703946 -124612819 + AluYa5 SINE Alu 1 303 -8 1664 214 80 89 chr10 15703946 15704483 -124612282 + LTR8 LTR ERV1 160 691 0 3208 147 63 38 chr10 15704483 15704889 -124611876 + LTR34 LTR ERV1 268 699 0 362 279 54 16 chr10 15704900 15705158 -124611607 + L1MC5 LINE L1 7640 7907 -54 1982 136 54 70 chr10 15705185 15705448 -124611317 + Tigger2a DNA MER2_type 1 256 -2452 1511 98 110 30 chr10 15705448 15705684 -124611081 + AluSp SINE Alu 47 301 -12 1982 136 54 70 chr10 15705684 15705861 -124610904 + Tigger2a DNA MER2_type 256 434 0 3906 111 45 96 chr10 15706461 15707288 -124609477 + LTR1 LTR ERV1 1 785 0 863 228 129 49 chr10 15707297 15707735 -124609030 + MER110A LTR ERV1 39 491 0 497 239 75 31 chr10 15708433 15708592 -124608173 + MIR SINE MIR 61 226 -36 479 222 15 89 chr10 15709287 15709422 -124607343 - MIR SINE MIR -102 160 36 464 319 69 25 chr10 15709523 15709683 -124607082 + MER91A DNA MER1_type 29 195 -1 195 328 60 0 chr10 15710086 15710153 -124606612 + L2 LINE L2 2995 3065 -248 2469 62 3 0 chr10 15710156 15710447 -124606318 + AluSp SINE Alu 1 292 -21 1235 244 73 0 chr10 15710845 15711254 -124605511 - L1M4 LINE L1 -3058 3088 2650 580 163 23 8 chr10 15711783 15711912 -124604853 - L1MD3 LINE L1 -954 7041 6911 412 145 5 0 chr10 15711918 15711999 -124604766 + L1P5 LINE L1 5397 5479 -677 10591 208 36 24 chr10 15712051 15715673 -124601092 - L1PA15-16 LINE L1 -1228 5621 1851 486 238 21 21 chr10 15715667 15715810 -124600955 - L1M4 LINE L1 -1953 4193 4051 * 1703 270 37 2 chr10 15715813 15716458 -124600307 - L1M4 LINE L1 -2300 3846 3179 1036 258 58 0 chr10 15716543 15716919 -124599846 - L1M4 LINE L1 -3177 2969 2572 251 158 18 18 chr10 15716919 15716976 -124599789 + T-rich Low_complexity Low_complexity 2 58 0 768 152 0 146 chr10 15717277 15717480 -124599285 + AluSg/x SINE Alu 134 310 0 290 236 14 0 chr10 15717956 15718028 -124598737 - L1M4 LINE L1 -3559 2587 2515 318 270 144 9 chr10 15721052 15721163 -124595602 + L2 LINE L2 3187 3312 -1 22 0 0 0 chr10 15721342 15721364 -124595401 + AT_rich Low_complexity Low_complexity 1 22 0 624 239 23 0 chr10 15721889 15722019 -124594746 - FLAM_C SINE Alu 0 133 1 2835 171 18 34 chr10 15722597 15723158 -124593607 - LTR38 LTR ERV1 0 556 5 1467 269 35 63 chr10 15723517 15723607 -124593158 - LOR1-int LTR ERV1 -413 7343 7252 1892 140 27 10 chr10 15723607 15723900 -124592865 - AluSx SINE Alu -12 300 3 1467 269 35 63 chr10 15723900 15724275 -124592490 - LOR1-int LTR ERV1 -504 7252 6868 3760 122 18 22 chr10 15724275 15724825 -124591940 + LTR14 LTR ERVK 1 548 0 1467 269 35 63 chr10 15724825 15725392 -124591373 - LOR1-int LTR ERV1 -888 6868 6317 369 305 40 29 chr10 15725549 15725723 -124591042 - LOR1-int LTR ERV1 -514 7606 7431 2862 133 70 79 chr10 15725798 15726483 -124590282 - LOR1-int LTR ERV1 -6607 1513 835 5116 140 36 28 chr10 15726483 15727382 -124589383 + LTR5 LTR ERVK 1 906 -63 1056 114 17 29 chr10 15727382 15727557 -124589208 - THE1B LTR MaLR -17 347 175 1196 91 68 109 chr10 15727601 15727653 -124589112 - THE1B LTR MaLR -152 212 159 2200 103 0 0 chr10 15727653 15727980 -124588785 - AluSg SINE Alu 0 327 1 1196 91 68 109 chr10 15727980 15728147 -124588618 - THE1B LTR MaLR -205 159 1 254 254 0 0 chr10 15728147 15728204 -124588561 - LTR38 LTR ERV1 -499 57 1 203 269 0 19 chr10 15728399 15728451 -124588314 + (TATG)n Simple_repeat Simple_repeat 4 54 0 307 189 14 23 chr10 15728505 15728594 -124588171 - L1MC4 LINE L1 0 8041 7911 447 288 118 19 chr10 15728701 15728898 -124587867 - MLT1H1 LTR MaLR -287 268 22 2174 90 45 0 chr10 15728938 15729227 -124587538 + AluYa5 SINE Alu 1 302 -9 2311 221 100 10 chr10 15729227 15730028 -124586737 - L1MC4 LINE L1 -285 7757 6744 405 54 0 0 chr10 15730035 15730091 -124586674 + (TG)n Simple_repeat Simple_repeat 2 57 0 558 315 37 11 chr10 15730094 15730364 -124586401 - L1MC4a LINE L1 -1228 6580 6304 1454 195 56 0 chr10 15730365 15730666 -124586099 + AluJb SINE Alu 1 316 0 560 112 11 0 chr10 15730680 15730769 -124585996 - L1MA4 LINE L1 -455 5845 5756 2701 120 21 54 chr10 15730769 15731240 -124585525 + L1MA4 LINE L1 5828 6294 -6 2031 133 7 3 chr10 15731642 15731950 -124584815 - AluSg SINE Alu -1 309 1 192 163 0 0 chr10 15732112 15732155 -124584610 + T-rich Low_complexity Low_complexity 1 43 0 241 143 0 24 chr10 15732316 15732358 -124584407 + L1MA4 LINE L1 6199 6239 -61 260 241 157 12 chr10 15732894 15732977 -124583788 - L2 LINE L2 -32 3281 3187 2470 201 46 114 chr10 15735208 15735416 -124581349 + L1M4c LINE L1 2026 2246 -4136 1661 199 0 3 chr10 15735416 15735713 -124581052 + AluJo SINE Alu 1 296 -16 2470 201 46 114 chr10 15735713 15735796 -124580969 + L1M4c LINE L1 2246 2333 -4049 2207 135 0 0 chr10 15735796 15736100 -124580665 + AluSx SINE Alu 1 304 -8 2470 201 46 114 chr10 15736100 15737038 -124579727 + L1M4c LINE L1 2333 3175 -3207 4620 136 29 1 chr10 15737433 15738166 -124578599 + Tigger2 DNA MER2_type 1 753 -1965 2374 87 7 3 chr10 15738243 15738552 -124578213 - AluSg SINE Alu 0 310 1 440 288 69 12 chr10 15738933 15739093 -124577672 + MIR SINE MIR 64 232 -30 546 272 111 21 chr10 15739647 15739882 -124576883 - MIR SINE MIR 0 262 7 1839 131 45 7 chr10 15739917 15740208 -124576557 + AluJo SINE Alu 5 306 -6 22 0 0 0 chr10 15740251 15740273 -124576492 + AT_rich Low_complexity Low_complexity 1 22 0 239 163 47 0 chr10 15740280 15740323 -124576442 - L2 LINE L2 -260 3053 3009 2362 96 0 0 chr10 15740403 15740706 -124576059 - AluSx SINE Alu -9 303 1 198 277 0 0 chr10 15740829 15740876 -124575889 - MIR3 SINE MIR -15 193 147 478 235 43 0 chr10 15741437 15741552 -124575213 - MIR SINE MIR -43 219 100 449 222 103 12 chr10 15741692 15741830 -124574935 + MIR SINE MIR 13 146 -63 1129 191 27 22 chr10 15741911 15742136 -124574629 - L1MB7 LINE L1 -19 6165 5940 517 314 90 0 chr10 15742631 15742819 -124573946 - MIR SINE MIR -56 206 2 1239 126 11 6 chr10 15742819 15742994 -124573771 - AluJo SINE Alu -136 176 1 2417 131 8 27 chr10 15743680 15744114 -124572651 - L1PB1 LINE L1 -3 6161 5720 393 22 0 0 chr10 15744114 15744160 -124572605 + (CA)n Simple_repeat Simple_repeat 2 47 0 2326 95 0 3 chr10 15744165 15744469 -124572296 - AluSg SINE Alu -7 303 1 2417 131 8 27 chr10 15744469 15744577 -124572188 - L1PB1 LINE L1 -448 5716 5674 227 250 33 43 chr10 15745434 15745526 -124571239 - MER112 DNA MER1_type -168 92 2 1112 243 100 48 chr10 15745761 15746101 -124570664 + L2 LINE L2 2553 2927 -386 1740 140 9 92 chr10 15746101 15746429 -124570336 - AluJb SINE Alu -10 302 2 1112 243 100 48 chr10 15746429 15746557 -124570208 + L2 LINE L2 2927 3047 -266 672 99 0 0 chr10 15746559 15746650 -124570115 - AluSc SINE Alu -16 293 203 457 146 5 19 chr10 15746689 15746892 -124569873 + AluJo SINE Alu 1 286 -26 378 0 0 0 chr10 15746892 15746934 -124569831 + (CATA)n Simple_repeat Simple_repeat 2 43 0 292 261 58 51 chr10 15746947 15747085 -124569680 + L2 LINE L2 3091 3229 -84 599 182 9 9 chr10 15747085 15747195 -124569570 - FRAM SINE Alu 0 176 67 190 303 40 0 chr10 15747233 15747309 -124569456 + L2 LINE L2 3222 3300 -13 186 103 0 0 chr10 15747310 15747339 -124569426 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 226 262 24 24 chr10 15747494 15747578 -124569187 + CT-rich Low_complexity Low_complexity 3 86 0 2396 92 0 0 chr10 15748039 15748342 -124568423 - AluSc SINE Alu -6 303 1 321 213 93 0 chr10 15748374 15748449 -124568316 - L1ME3A LINE L1 -5 6165 6084 407 163 143 13 chr10 15748468 15748575 -124568190 - L1ME2 LINE L1 0 6164 6044 2065 204 60 50 chr10 15748923 15748975 -124567790 - MLT1F LTR MaLR 0 542 492 2112 110 0 39 chr10 15748975 15749285 -124567480 + AluSq SINE Alu 1 298 -15 2065 204 60 50 chr10 15749285 15749753 -124567012 - MLT1F LTR MaLR -50 492 17 2347 84 0 3 chr10 15750261 15750558 -124566207 - AluY SINE Alu -15 296 1 627 280 98 29 chr10 15750736 15751318 -124565447 - L1M4 LINE L1 -1037 5109 4488 4478 184 28 19 chr10 15751565 15752858 -124563907 + L1MB8 LINE L1 4866 6177 -1 279 79 0 0 chr10 15752871 15752909 -124563856 + (TCTCCC)n Simple_repeat Simple_repeat 6 43 0 9719 62 4 105 chr10 15752912 15754452 -124562313 + SVA Other Other 1 1384 -2 35 0 0 0 chr10 15754452 15754487 -124562278 + AT_rich Low_complexity Low_complexity 1 35 0 428 307 107 43 chr10 15754623 15755135 -124561630 + L1ME2 LINE L1 5328 5882 -282 25 0 0 0 chr10 15755300 15755325 -124561440 + AT_rich Low_complexity Low_complexity 1 25 0 485 289 172 12 chr10 15755464 15755789 -124560976 - L1M4 LINE L1 -2740 3406 3030 1911 134 46 60 chr10 15755793 15755970 -124560795 - MER47A DNA MER2_type -1957 366 188 1603 121 0 0 chr10 15755970 15756214 -124560551 - AluSx SINE Alu 0 301 58 1911 134 46 60 chr10 15756214 15756401 -124560364 - MER47A DNA MER2_type -2135 188 6 23 0 0 0 chr10 15756627 15756650 -124560115 + AT_rich Low_complexity Low_complexity 1 23 0 304 309 0 21 chr10 15757468 15757565 -124559200 + MIR SINE MIR 61 155 -107 1211 251 97 68 chr10 15757662 15758240 -124558525 - MER67C LTR ERV1 -45 665 71 256 326 11 11 chr10 15758249 15758341 -124558424 - MIR SINE MIR -167 95 4 315 218 69 11 chr10 15758437 15758524 -124558241 - L1ME4a LINE L1 -6 6115 6024 991 144 14 0 chr10 15758542 15758688 -124558077 + FRAM SINE Alu 1 143 -33 281 189 0 19 chr10 15758695 15758748 -124558017 - L1ME4a LINE L1 -88 6033 5982 2503 42 0 0 chr10 15759180 15759504 -124557261 - AluY SINE Alu 0 324 1 214 318 118 0 chr10 15759527 15759637 -124557128 + L2 LINE L2 3137 3259 -13 313 267 143 0 chr10 15759949 15760054 -124556711 - MIR SINE MIR -31 231 112 197 289 199 36 chr10 15760159 15760325 -124556440 - L2 LINE L2 -225 3047 2855 2037 120 3 28 chr10 15760530 15760875 -124555890 + AluSq SINE Alu 1 313 0 2238 63 22 0 chr10 15761507 15761778 -124554987 - AluSg SINE Alu -5 305 29 192 40 0 0 chr10 15761985 15762010 -124554755 + (T)n Simple_repeat Simple_repeat 1 25 0 474 277 29 0 chr10 15762398 15762535 -124554230 + MIR SINE MIR 95 235 -27 287 255 99 50 chr10 15763072 15763213 -124553552 - MIR SINE MIR -95 167 20 202 185 74 0 chr10 15763218 15763272 -124553493 + T-rich Low_complexity Low_complexity 1 58 0 1566 147 50 41 chr10 15763527 15763847 -124552918 + MER33 DNA MER1_type 2 324 0 280 219 10 52 chr10 15763969 15763986 -124552779 - L1MC5 LINE L1 -33 7928 7912 2327 107 3 0 chr10 15763986 15764296 -124552469 - AluSq SINE Alu -2 311 1 280 219 10 52 chr10 15764296 15764374 -124552391 - L1MC5 LINE L1 -49 7912 7837 22 0 0 0 chr10 15764407 15764429 -124552336 + AT_rich Low_complexity Low_complexity 1 22 0 1799 136 89 16 chr10 15764442 15764758 -124552007 + MER1B DNA MER1_type 1 339 0 1080 60 8 0 chr10 15764788 15764922 -124551843 - AluSg/x SINE Alu -13 299 165 22 35 0 0 chr10 15765059 15765088 -124551677 + AT_rich Low_complexity Low_complexity 1 29 0 2357 105 0 0 chr10 15765325 15765630 -124551135 + AluSq SINE Alu 1 305 -8 21 0 0 0 chr10 15765638 15765659 -124551106 + AT_rich Low_complexity Low_complexity 1 21 0 15094 112 14 5 chr10 15865749 15868039 -124448726 - HERVE LTR ERV1 -4396 3417 1108 217 223 11 71 chr10 15868118 15868302 -124448463 + (TAA)n Simple_repeat Simple_repeat 3 175 0 21 36 0 0 chr10 15868321 15868349 -124448416 + AT_rich Low_complexity Low_complexity 1 28 0 1346 232 110 33 chr10 15868395 15869654 -124447111 + SATR1 Satellite Satellite 1 1356 -24 765 244 278 2 chr10 15869949 15870825 -124445940 + SATR1 Satellite Satellite 1 1117 -1 613 241 305 11 chr10 15870907 15871255 -124445510 + SATR1 Satellite Satellite 20 469 -1 910 218 188 60 chr10 15871281 15871746 -124445019 + SATR1 Satellite Satellite 1 524 -97 818 227 195 27 chr10 15871793 15872203 -124444562 + SATR1 Satellite Satellite 1 478 -404 2071 106 0 20 chr10 15873899 15874200 -124442565 + AluSc SINE Alu 1 295 -14 247 327 44 26 chr10 15874266 15874379 -124442386 - L2 LINE L2 0 3272 3158 2151 119 0 10 chr10 15874781 15875092 -124441673 - AluSg SINE Alu -2 308 1 262 319 70 33 chr10 15875486 15875699 -124441066 + MIR SINE MIR 32 252 -10 212 158 0 0 chr10 15875718 15875756 -124441009 + (CAT)n Simple_repeat Simple_repeat 3 40 0 1714 234 22 46 chr10 15876541 15876783 -124439982 - L1MB3 LINE L1 -32 6151 5905 1961 142 10 0 chr10 15876783 15877078 -124439687 - AluSx SINE Alu -3 309 12 1714 234 22 46 chr10 15877078 15877204 -124439561 - L1MB3 LINE L1 -278 5905 5777 2131 119 0 10 chr10 15877204 15877514 -124439251 - AluSx SINE Alu 0 312 6 1714 234 22 46 chr10 15877514 15878509 -124438256 - L1MB3 LINE L1 -406 5777 4818 1303 125 5 5 chr10 15878554 15878754 -124438011 + AluSp SINE Alu 1 200 -113 1404 215 2 69 chr10 15878917 15879141 -124437624 - L1MA4 LINE L1 -153 6147 5960 1683 160 4 7 chr10 15879141 15879422 -124437343 - AluSx SINE Alu -32 280 1 1404 215 2 69 chr10 15879422 15879601 -124437164 - L1MA4 LINE L1 -340 5960 5771 348 238 105 35 chr10 15879643 15879786 -124436979 + HsTC2 DNA Tc2 1631 1783 -115 2132 114 0 63 chr10 15879791 15880124 -124436641 + AluSp SINE Alu 1 312 -1 344 301 20 7 chr10 15880282 15880428 -124436337 + MER5B DNA MER1_type 25 172 -6 694 248 40 0 chr10 15880533 15880731 -124436034 - MER6B DNA MER2_type 0 210 5 1352 126 27 31 chr10 15882630 15882853 -124433912 + AluSq SINE Alu 1 222 -91 878 227 278 3 chr10 15882857 15883188 -124433577 + SATR1 Satellite Satellite 48 469 -1 1264 221 202 51 chr10 15883216 15884096 -124432669 + SATR1 Satellite Satellite 1 1013 -2 1383 188 74 116 chr10 15884133 15884617 -124432148 + SATR1 Satellite Satellite 7 470 0 1355 139 5 0 chr10 15884791 15884992 -124431773 + AluSg/x SINE Alu 103 304 -6 396 0 0 0 chr10 15885459 15885503 -124431262 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 952 134 0 7 chr10 15885506 15885648 -124431117 - AluSg/x SINE Alu -26 283 143 882 133 113 0 chr10 15885704 15885855 -124430910 - AluY SINE Alu -9 302 135 1869 177 39 21 chr10 15885857 15886246 -124430519 + L1MB7 LINE L1 5700 6095 -89 2284 91 10 3 chr10 15886276 15886572 -124430193 - AluSx SINE Alu -14 298 1 2040 116 11 0 chr10 15886597 15886881 -124429884 + AluSx SINE Alu 1 287 -25 333 177 25 0 chr10 15886987 15887066 -124429699 + AluS SINE Alu 220 300 -1 1423 218 24 40 chr10 15888060 15888282 -124428483 + MLT1A1 LTR MaLR 1 216 -149 2179 109 0 23 chr10 15888282 15888585 -124428180 + AluSx SINE Alu 1 296 -16 1423 218 24 40 chr10 15888585 15888733 -124428032 + MLT1A1 LTR MaLR 216 365 0 25 31 0 0 chr10 15888898 15888930 -124427835 + AT_rich Low_complexity Low_complexity 1 32 0 248 272 43 22 chr10 15889166 15889258 -124427507 + L1ME LINE L1 5559 5652 -469 1914 129 27 7 chr10 15889405 15889700 -124427065 - AluSq SINE Alu -12 301 1 249 298 80 27 chr10 15889792 15889980 -124426785 - L1M4 LINE L1 -2235 3911 3714 356 276 20 91 chr10 15889987 15890001 -124426764 - L1M4 LINE L1 -3099 3047 3034 1967 128 21 3 chr10 15890001 15890290 -124426475 - AluSx SINE Alu -18 294 1 356 276 20 91 chr10 15890290 15890395 -124426370 - L1M4 LINE L1 -3112 3034 2923 1522 204 3 11 chr10 15890395 15890727 -124426038 - AluJo SINE Alu 0 330 1 356 276 20 91 chr10 15890727 15890859 -124425906 - L1M4 LINE L1 -3223 2923 2812 1021 257 148 42 chr10 15891081 15891570 -124425195 + MLT2F LTR ERVL 1 543 -120 259 279 47 23 chr10 15891570 15891656 -124425109 - LTR52 LTR ERVL 0 421 334 189 195 0 0 chr10 15891687 15891728 -124425037 + (CA)n Simple_repeat Simple_repeat 1 41 0 297 245 199 0 chr10 15891862 15891996 -124424769 - LTR52 LTR ERVL -240 181 13 1813 144 16 7 chr10 15891996 15892301 -124424464 + AluSx SINE Alu 1 308 -4 297 245 199 0 chr10 15892301 15892317 -124424448 - LTR52 LTR ERVL -408 13 1 230 305 48 0 chr10 15892324 15892429 -124424336 + MLT2F LTR ERVL 552 661 -2 2020 100 24 3 chr10 15892710 15893000 -124423765 - AluSx SINE Alu -16 296 1 2827 13 0 0 chr10 15893034 15893339 -124423426 - AluYb8 SINE Alu -13 305 1 2276 123 0 0 chr10 15893660 15893970 -124422795 + AluSx SINE Alu 1 310 -2 1227 166 0 5 chr10 15894063 15894262 -124422503 + AluJb SINE Alu 85 282 -30 216 0 0 0 chr10 15894264 15894288 -124422477 + (CAAT)n Simple_repeat Simple_repeat 2 25 0 663 261 51 20 chr10 15894288 15894541 -124422224 + LTR16C LTR ERVL 231 491 0 856 111 0 16 chr10 15894772 15894898 -124421867 - AluJ SINE Alu -1 311 188 606 229 67 77 chr10 15895006 15895392 -124421373 + LTR15 LTR ERV1 112 596 0 881 151 157 18 chr10 15895392 15895558 -124421207 - AluJ SINE Alu -119 193 5 2077 127 3 0 chr10 15895848 15896169 -124420596 - AluSq SINE Alu 0 322 1 1873 108 46 32 chr10 15896287 15896607 -124420158 - THE1B LTR MaLR -3 352 1 2540 197 72 2 chr10 15896614 15897131 -124419634 + MER68 LTR ERV1 6 558 -4 2049 134 3 0 chr10 15897380 15897671 -124419094 - AluSx SINE Alu -19 293 2 1816 151 6 51 chr10 15897725 15898037 -124418728 + AluJo SINE Alu 1 298 -14 458 251 120 31 chr10 15898143 15898334 -124418431 - HERVL68 LTR ERVL -439 2598 2391 2168 97 17 7 chr10 15898432 15898722 -124418043 - AluSx SINE Alu -18 294 2 1940 121 6 53 chr10 15899007 15899119 -124417646 + AluSx SINE Alu 1 117 -195 3364 100 4 0 chr10 15899119 15899570 -124417195 + MLT2A2 LTR ERVL 1 453 0 1940 121 6 53 chr10 15899570 15899779 -124416986 + AluSx SINE Alu 117 307 -5 1951 136 7 14 chr10 15900007 15900302 -124416463 - AluSx SINE Alu -11 301 9 300 167 26 13 chr10 15900584 15900662 -124416103 + GA-rich Low_complexity Low_complexity 2 80 0 648 199 53 74 chr10 15900683 15900984 -124415781 - MSTD LTR MaLR 0 396 103 2275 108 3 0 chr10 15901388 15901685 -124415080 - AluSq SINE Alu -15 298 1 344 260 12 82 chr10 15902176 15902313 -124414452 + MER5A DNA MER1_type 8 142 -47 2081 108 10 10 chr10 15902313 15902608 -124414157 + AluSg SINE Alu 1 295 -15 344 260 12 82 chr10 15902608 15902653 -124414112 + MER5A DNA MER1_type 142 189 0 1357 176 10 80 chr10 15903339 15903515 -124413250 - AluJo SINE Alu -31 281 133 2122 134 0 13 chr10 15903515 15903821 -124412944 + AluSx SINE Alu 1 302 -10 1357 176 10 80 chr10 15903821 15903946 -124412819 - AluJo SINE Alu -179 133 1 182 305 74 0 chr10 15904069 15904164 -124412601 + L2 LINE L2 2909 3010 -262 * 225 213 0 0 chr10 15904152 15904199 -124412566 - L2 LINE L2 -1 3312 3266 2153 75 4 4 chr10 15904387 15904653 -124412112 - AluSg SINE Alu -8 302 37 210 310 0 0 chr10 15904833 15904904 -124411861 - L2 LINE L2 -65 3248 3178 2389 96 3 3 chr10 15905354 15905667 -124411098 - AluSp SINE Alu 0 313 1 2165 121 0 3 chr10 15905668 15905966 -124410799 - AluSx SINE Alu -15 297 1 2300 110 0 3 chr10 15906241 15906542 -124410223 - AluSq SINE Alu -13 300 1 1239 93 44 6 chr10 15906542 15906719 -124410046 - L1MA1 LINE L1 -47 6255 6072 425 261 7 72 chr10 15906865 15906939 -124409826 + MIR SINE MIR 12 72 -190 2594 58 0 10 chr10 15906939 15907249 -124409516 - AluY SINE Alu -4 307 1 425 261 7 72 chr10 15907249 15907327 -124409438 + MIR SINE MIR 72 154 -108 1921 122 44 10 chr10 15907556 15907852 -124408913 - AluSq SINE Alu -2 311 6 455 271 57 32 chr10 15908134 15908381 -124408384 - L1MEc LINE L1 -3904 2636 2384 23 0 0 0 chr10 15908511 15908534 -124408231 + AT_rich Low_complexity Low_complexity 1 23 0 493 157 0 34 chr10 15908534 15908623 -124408142 - AluSg/x SINE Alu -5 304 219 730 280 70 24 chr10 15908627 15909140 -124407625 - L1MEc LINE L1 -4474 2107 1522 1691 133 0 16 chr10 15909888 15910143 -124406622 + AluSx SINE Alu 55 305 -7 1758 112 116 8 chr10 15910153 15910443 -124406322 + AluSg SINE Alu 1 318 0 1730 113 4 4 chr10 15910555 15910795 -124405970 - AluSx SINE Alu -10 302 63 218 286 12 24 chr10 15911125 15911209 -124405556 + CT-rich Low_complexity Low_complexity 2 84 0 1869 117 10 38 chr10 15911516 15911806 -124404959 + AluSx SINE Alu 15 296 -16 2103 133 0 0 chr10 15912305 15912607 -124404158 - AluSx SINE Alu -10 302 1 1869 140 14 4 chr10 15912911 15913190 -124403575 + AluSp SINE Alu 1 282 -31 180 0 0 0 chr10 15913190 15913210 -124403555 + (T)n Simple_repeat Simple_repeat 1 20 0 1463 231 4 0 chr10 15913241 15913522 -124403243 - AluJo SINE Alu -30 282 1 406 212 51 8 chr10 15914083 15914201 -124402564 - L1MEc LINE L1 -4129 2267 2145 882 126 0 0 chr10 15914227 15914346 -124402419 + FLAM_C SINE Alu 3 121 -22 1968 130 0 0 chr10 15914355 15914631 -124402134 - AluSx SINE Alu -10 302 27 2428 70 3 3 chr10 15914631 15914930 -124401835 - AluY SINE Alu -10 301 1 295 143 0 0 chr10 15914930 15914972 -124401793 - AluSx SINE Alu -260 42 1 285 229 0 12 chr10 15915026 15915109 -124401656 - L1MEc LINE L1 -4282 2114 2033 1567 88 0 0 chr10 15915150 15915363 -124401402 - AluSg/x SINE Alu 0 315 103 230 276 149 0 chr10 15915749 15915883 -124400882 - HAL1b LINE L1 -541 807 654 832 224 22 72 chr10 15915905 15916090 -124400675 - MER58A DNA MER1_type -2196 224 50 2152 130 3 3 chr10 15916090 15916389 -124400376 + AluSx SINE Alu 1 299 -13 832 224 22 72 chr10 15916389 15916426 -124400339 - MER58A DNA MER1_type -2370 50 13 824 176 0 0 chr10 15916537 15916662 -124400103 - FLAM_C SINE Alu -18 125 1 2172 98 6 44 chr10 15916814 15917130 -124399635 - AluSx SINE Alu -8 304 1 3824 152 24 61 chr10 15917240 15917806 -124398959 + MER50 LTR ERV1 1 586 -148 1609 162 16 65 chr10 15917806 15918115 -124398650 - AluJb SINE Alu -14 298 5 3824 152 24 61 chr10 15918115 15918129 -124398636 + MER50 LTR ERV1 586 599 -135 2262 113 0 7 chr10 15918129 15918430 -124398335 - AluSx SINE Alu -13 299 1 3824 152 24 61 chr10 15918430 15918586 -124398179 + MER50 LTR ERV1 599 711 -23 1441 119 0 5 chr10 15919046 15919248 -124397517 - AluSg/x SINE Alu -4 306 106 2140 121 0 0 chr10 15919940 15920220 -124396545 - AluSx SINE Alu -14 298 19 890 274 52 16 chr10 15920255 15920561 -124396204 - L1ME LINE L1 -366 5873 5557 217 71 0 48 chr10 15920678 15920720 -124396045 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 1558 183 44 24 chr10 15920720 15920885 -124395880 - AluJb SINE Alu -11 301 126 180 0 0 0 chr10 15920885 15920905 -124395860 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1558 183 44 24 chr10 15920905 15921034 -124395731 - AluJb SINE Alu -186 126 1 680 273 69 62 chr10 15921034 15921484 -124395281 - L1ME LINE L1 -865 5350 4894 1974 142 42 0 chr10 15921484 15921772 -124394993 - AluSx SINE Alu -10 302 3 680 273 69 62 chr10 15921772 15921841 -124394924 - L1ME LINE L1 -1321 4894 4827 1351 229 89 10 chr10 15921873 15922274 -124394491 - L1 LINE L1 -1265 4881 4457 1099 193 0 30 chr10 15922284 15922481 -124394284 - AluJo SINE Alu -121 191 1 915 267 65 67 chr10 15922481 15922960 -124393805 - L1ME LINE L1 -4341 2055 1578 860 138 0 28 chr10 15923006 15923187 -124393578 + (TCCC)n Simple_repeat Simple_repeat 4 179 0 2161 118 3 3 chr10 15924202 15924498 -124392267 - AluSx SINE Alu -16 296 1 1621 192 27 30 chr10 15924888 15925022 -124391743 - MER58B DNA MER1_type -2083 337 204 1663 191 0 26 chr10 15925022 15925331 -124391434 + AluJo SINE Alu 1 301 -11 1621 192 27 30 chr10 15925331 15925534 -124391231 - MER58B DNA MER1_type -2216 204 1 2258 92 3 10 chr10 15925663 15925958 -124390807 - AluSx SINE Alu -19 293 1 2454 63 3 10 chr10 15926388 15926688 -124390077 - AluSc SINE Alu -11 298 1 2132 91 14 14 chr10 15927510 15927774 -124388991 + AluSx SINE Alu 15 294 -18 211 37 0 0 chr10 15927774 15927801 -124388964 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2132 91 14 14 chr10 15927801 15927821 -124388944 + AluSx SINE Alu 293 312 0 1903 123 0 4 chr10 15928193 15928469 -124388296 + AluSx SINE Alu 1 275 -37 1390 161 13 79 chr10 15928536 15928853 -124387912 + AluJb SINE Alu 1 296 -16 1985 129 3 16 chr10 15928984 15929295 -124387470 - AluSx SINE Alu -5 307 1 423 269 34 0 chr10 15929430 15929549 -124387216 + AluSq/x SINE Alu 2 124 -179 2109 217 110 12 chr10 15930124 15931891 -124384874 + SATR1 Satellite Satellite 1 1938 -20 14958 89 12 18 chr10 15931891 15933947 -124382818 - HERVE LTR ERV1 -2648 5165 3122 320 309 12 0 chr10 15934353 15934437 -124382328 - L2 LINE L2 -8 3305 3221 1852 123 0 11 chr10 15934461 15934738 -124382027 + AluSx SINE Alu 1 274 -38 216 0 0 0 chr10 15934745 15934769 -124381996 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2285 100 0 0 chr10 15935166 15935475 -124381290 + AluSx SINE Alu 2 310 -2 2062 90 0 61 chr10 15935726 15936038 -124380727 - AluSx SINE Alu -19 293 1 2185 71 3 7 chr10 15936397 15936691 -124380074 - AluSg SINE Alu -2 308 16 1605 186 86 19 chr10 15936885 15937246 -124379519 - MSTB LTR MaLR 0 426 42 195 259 19 0 chr10 15937540 15937594 -124379171 - MIR SINE MIR -72 136 82 25 0 0 0 chr10 15937791 15937816 -124378949 + AT_rich Low_complexity Low_complexity 1 25 0 1893 134 3 10 chr10 15937821 15938112 -124378653 + AluSq SINE Alu 1 289 -24 1400 151 23 19 chr10 15938114 15938373 -124378392 - AluJo SINE Alu -30 282 23 2017 131 0 6 chr10 15938404 15938716 -124378049 + AluSg SINE Alu 1 310 0 400 184 0 0 chr10 15938770 15938846 -124377919 + L1MEc LINE L1 2039 2114 -4282 2166 96 0 0 chr10 15938904 15939196 -124377569 + AluSx SINE Alu 1 292 -20 3172 83 2 2 chr10 15939604 15940011 -124376754 + THE1B-int LTR MaLR 1174 1580 0 2259 152 6 20 chr10 15940016 15940372 -124376393 + THE1B LTR MaLR 14 364 0 1480 195 0 20 chr10 15940546 15940843 -124375922 + AluJo SINE Alu 1 291 -21 2060 125 3 0 chr10 15940901 15941197 -124375568 + AluSq SINE Alu 1 297 -16 2987 53 24 0 chr10 15942243 15942618 -124374147 - L1PA7 LINE L1 -1 6153 5770 39 54 0 32 chr10 15943121 15943214 -124373551 + AT_rich Low_complexity Low_complexity 1 90 0 1860 130 0 17 chr10 15943558 15943858 -124372907 - AluJb SINE Alu -8 304 10 2082 106 0 0 chr10 15943877 15944169 -124372596 - AluSg SINE Alu -18 292 1 2075 127 0 0 chr10 15944590 15944890 -124371875 + AluSx SINE Alu 1 300 -12 3921 119 75 18 chr10 15945391 15946015 -124370750 + PABL_A LTR ERV1 1 660 0 432 187 13 0 chr10 15946222 15946297 -124370468 + MIR SINE MIR 15 90 -172 2179 94 13 0 chr10 15946298 15946596 -124370169 + AluSx SINE Alu 1 302 -10 2082 123 3 3 chr10 15947047 15947357 -124369408 + AluSx SINE Alu 1 310 -2 1883 138 10 7 chr10 15947784 15948075 -124368690 - AluSx SINE Alu -20 292 1 228 241 161 45 chr10 15948148 15948260 -124368505 - L2 LINE L2 -10 3262 3138 3715 89 109 42 chr10 15948709 15949303 -124367462 - MER51A LTR ERV1 0 634 1 2190 102 3 0 chr10 15950318 15950612 -124366153 + AluSx SINE Alu 1 295 -17 1812 141 0 17 chr10 15950886 15951024 -124365741 + AluJo SINE Alu 1 140 -172 2263 93 3 0 chr10 15951024 15951324 -124365441 + AluSp SINE Alu 1 301 -12 1812 141 0 17 chr10 15951324 15951484 -124365281 + AluJo SINE Alu 140 294 -18 444 251 263 6 chr10 15951510 15951689 -124365076 - MIR SINE MIR -15 247 23 1955 122 0 3 chr10 15951787 15952073 -124364692 + AluSx SINE Alu 1 285 -27 317 111 0 0 chr10 15952073 15952118 -124364647 + Alu SINE Alu 251 295 -6 994 128 0 87 chr10 15952118 15952314 -124364451 + AluSg/x SINE Alu 119 297 -13 381 253 78 60 chr10 15952314 15952583 -124364182 + L1ME4a LINE L1 5820 6093 -28 276 130 0 0 chr10 15953361 15953407 -124363358 + (GA)n Simple_repeat Simple_repeat 1 46 0 50 58 0 10 chr10 15953485 15953529 -124363236 + AT_rich Low_complexity Low_complexity 1 44 -58 2366 67 3 0 chr10 15953529 15953826 -124362939 + AluSp SINE Alu 1 298 -15 50 58 0 10 chr10 15953826 15953884 -124362881 + AT_rich Low_complexity Low_complexity 44 102 0 75 51 0 0 chr10 15953906 15954023 -124362742 + AT_rich Low_complexity Low_complexity 1 117 0 619 103 9 95 chr10 15954026 15954142 -124362623 - FLAM_C SINE Alu -11 132 27 1823 133 7 3 chr10 15955130 15955450 -124361315 + AluJb SINE Alu 1 321 0 350 203 0 13 chr10 15955458 15955537 -124361228 - L1 LINE L1 -1494 4652 4575 307 248 66 91 chr10 15955555 15955676 -124361089 - MER5B DNA MER1_type -6 172 55 198 48 24 48 chr10 15955901 15955943 -124360822 + (TTTTC)n Simple_repeat Simple_repeat 1 41 0 198 261 198 0 chr10 15955956 15955992 -124360773 + L2 LINE L2 2915 2943 -329 2121 129 0 0 chr10 15955992 15956301 -124360464 - AluSx SINE Alu -3 309 1 198 261 198 0 chr10 15956301 15956375 -124360390 + L2 LINE L2 2943 3047 -225 331 273 172 16 chr10 15956430 15956665 -124360100 + L2 LINE L2 2828 3127 -186 2183 123 0 0 chr10 15956665 15956974 -124359791 - AluSx SINE Alu -3 309 1 331 273 172 16 chr10 15956974 15957057 -124359708 + L2 LINE L2 3127 3196 -117 331 257 44 9 chr10 15957199 15957312 -124359453 + REP3 LTR ERV 9 125 -437 198 0 0 0 chr10 15957329 15957351 -124359414 + (T)n Simple_repeat Simple_repeat 1 22 0 266 254 71 154 chr10 15957907 15958218 -124358547 + REP3 LTR ERV 178 462 -100 408 20 0 0 chr10 15958409 15958458 -124358307 + (CA)n Simple_repeat Simple_repeat 2 50 0 257 253 229 41 chr10 15959129 15959299 -124357466 - MIR SINE MIR -13 249 48 2011 128 3 0 chr10 15959709 15960021 -124356744 + AluSq SINE Alu 1 313 0 189 0 0 0 chr10 15961521 15961542 -124355223 + (A)n Simple_repeat Simple_repeat 1 21 0 509 97 0 0 chr10 15961856 15961928 -124354837 - MSTB LTR MaLR 0 426 355 2112 127 3 13 chr10 15961928 15962242 -124354523 + AluSx SINE Alu 1 311 -1 23 78 0 0 chr10 15962271 15962322 -124354443 + AT_rich Low_complexity Low_complexity 1 51 0 180 0 0 0 chr10 15962495 15962515 -124354250 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 1343 127 0 0 chr10 15962528 15962717 -124354048 - AluSg/x SINE Alu -27 283 95 387 0 0 0 chr10 15962874 15962917 -124353848 + (TA)n Simple_repeat Simple_repeat 2 44 0 2179 104 19 3 chr10 15962921 15963228 -124353537 - AluSx SINE Alu 0 312 1 2085 93 21 3 chr10 15963904 15964193 -124352572 + AluSg SINE Alu 17 310 0 261 0 0 0 chr10 15965142 15965171 -124351594 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 358 289 136 22 chr10 15965191 15965419 -124351346 + L1M4 LINE L1 3505 3758 -2388 1926 135 7 3 chr10 15965420 15965723 -124351042 + AluSx SINE Alu 1 304 -8 3557 244 62 16 chr10 15965747 15967532 -124349233 + L1MC/D LINE L1 1930 3796 -2744 2627 259 41 6 chr10 15967632 15968421 -124348344 + L1MC/D LINE L1 4407 5222 -1318 456 277 93 58 chr10 15968442 15968470 -124348295 + L1MC/D LINE L1 5651 5677 -927 2213 96 0 3 chr10 15968470 15968773 -124347992 + AluSq SINE Alu 1 302 -11 456 277 93 58 chr10 15968773 15969092 -124347673 + L1MC/D LINE L1 5677 6019 -585 1876 227 26 12 chr10 15969114 15969532 -124347233 + Charlie1a DNA MER1_type 2 425 -1030 491 235 181 7 chr10 15969793 15969942 -124346823 + MER5A DNA MER1_type 9 183 -6 1841 149 8 69 chr10 15970166 15970394 -124346371 - MER2 DNA MER2_type 0 344 145 2004 129 0 0 chr10 15970394 15970689 -124346076 + AluSx SINE Alu 5 299 -13 1841 149 8 69 chr10 15970689 15970822 -124345943 - MER2 DNA MER2_type -199 145 5 25 0 0 0 chr10 15971456 15971481 -124345284 + AT_rich Low_complexity Low_complexity 1 25 0 2149 97 3 0 chr10 15971591 15971881 -124344884 - AluSq SINE Alu -22 291 1 744 128 7 68 chr10 15972595 15972638 -124344127 - Charlie1 DNA MER1_type 0 2761 2717 2017 129 0 7 chr10 15972638 15972933 -124343832 - AluY SINE Alu -18 293 1 744 128 7 68 chr10 15972933 15973037 -124343728 - Charlie1 DNA MER1_type -44 2717 2623 679 215 58 70 chr10 15973055 15973227 -124343538 - Charlie1 DNA MER1_type -2590 171 2 2091 87 55 0 chr10 15973480 15973769 -124342996 + AluSc SINE Alu 2 306 -3 299 275 193 23 chr10 15974558 15974729 -124342036 + MIR SINE MIR 62 261 -1 258 194 137 93 chr10 15975234 15975373 -124341392 + MIR3 SINE MIR 2 146 -62 * 455 179 32 11 chr10 15975343 15975438 -124341327 + MIR SINE MIR 116 212 -50 216 0 0 0 chr10 15975843 15975867 -124340898 + (TATG)n Simple_repeat Simple_repeat 3 26 0 347 103 0 17 chr10 15975872 15975930 -124340835 + (TCCCC)n Simple_repeat Simple_repeat 3 59 0 1587 148 15 11 chr10 15975951 15976222 -124340543 - AluJb SINE Alu -39 273 2 1477 264 47 38 chr10 15976237 15976259 -124340506 - L1MEc LINE L1 -4868 1528 1508 1979 142 0 3 chr10 15976259 15976568 -124340197 + AluSx SINE Alu 1 308 -4 1477 264 47 38 chr10 15976568 15976904 -124339861 - L1MEc LINE L1 -4888 1508 1176 2022 142 0 0 chr10 15976904 15977206 -124339559 - AluSx SINE Alu -10 302 1 1477 264 47 38 chr10 15977206 15977680 -124339085 - L1MEc LINE L1 -5220 1176 688 518 298 59 99 chr10 15977668 15978292 -124338473 - L1MEc LINE L1 -5444 761 163 * 473 242 184 0 chr10 15978917 15979107 -124337658 + MIR SINE MIR 37 261 -1 255 245 111 96 chr10 15979141 15979475 -124337290 - L1ME4a LINE L1 -76 6045 5717 1977 173 0 0 chr10 15979475 15979775 -124336990 - AluSx SINE Alu -12 300 1 255 245 111 96 chr10 15979775 15979873 -124336892 - L1ME4a LINE L1 -404 5717 5603 1710 170 7 20 chr10 15979873 15980167 -124336598 - AluJb SINE Alu -22 290 1 255 245 111 96 chr10 15980167 15980202 -124336563 - L1ME4a LINE L1 -518 5603 5570 2445 209 24 14 chr10 15980329 15980836 -124335929 - Charlie1b DNA MER1_type -9 514 3 479 101 0 112 chr10 15981363 15981401 -124335364 + MADE1 DNA Mariner 2 26 -54 2181 120 3 0 chr10 15981401 15981693 -124335072 - AluSx SINE Alu -19 293 1 479 101 0 112 chr10 15981693 15981743 -124335022 + MADE1 DNA Mariner 26 80 0 2031 157 0 0 chr10 15982695 15982994 -124333771 + AluSx SINE Alu 1 299 -13 2212 107 3 0 chr10 15983335 15983675 -124333090 - AluSx SINE Alu 0 312 2 1144 156 69 9 chr10 15983676 15983907 -124332858 + L1MA7 LINE L1 6047 6291 0 2849 269 88 45 chr10 15984780 15985248 -124331517 - L1MCc LINE L1 -4888 1535 1089 2232 87 0 11 chr10 15985248 15985535 -124331230 - AluSq SINE Alu -27 286 3 2849 269 88 45 chr10 15985535 15986426 -124330339 - L1MCc LINE L1 -5334 1089 345 2144 129 3 0 chr10 15986426 15986728 -124330037 + AluSx SINE Alu 1 303 -9 2849 269 88 45 chr10 15986728 15987022 -124329743 - L1MCc LINE L1 -6078 345 65 2081 118 14 0 chr10 15987322 15987619 -124329146 - AluSp SINE Alu -9 304 4 2079 146 10 0 chr10 15987622 15987924 -124328841 - AluJo SINE Alu -7 305 1 289 280 75 9 chr10 15988127 15988234 -124328531 + L2 LINE L2 3118 3231 -41 2401 91 0 0 chr10 15988777 15989073 -124327692 - AluSg SINE Alu -14 296 1 301 48 0 0 chr10 15989090 15989132 -124327633 - L1MA3 LINE L1 0 6305 6264 2541 142 20 65 chr10 15989294 15989803 -124326962 - LTR19A LTR ERV1 0 486 1 2304 59 0 0 chr10 15990251 15990521 -124326244 + AluY SINE Alu 32 301 -10 1533 157 80 11 chr10 15991098 15991372 -124325393 + AluJo SINE Alu 1 293 -19 2254 97 0 7 chr10 15991616 15991905 -124324860 + AluSx SINE Alu 1 287 -25 1701 160 87 47 chr10 15992243 15992533 -124324232 - L1MD1 LINE L1 0 6242 5932 2115 148 0 0 chr10 15992533 15992844 -124323921 + AluSx SINE Alu 1 311 -1 1701 160 87 47 chr10 15992844 15992934 -124323831 - L1MD1 LINE L1 -310 5932 5847 2224 117 3 3 chr10 15993345 15993644 -124323121 - AluSx SINE Alu -13 299 1 4111 104 30 69 chr10 15993771 15994442 -124322323 + L1PB4 LINE L1 5475 6118 -38 2094 108 44 0 chr10 15994442 15994738 -124322027 + AluSx SINE Alu 1 309 -3 4111 104 30 69 chr10 15994738 15994775 -124321990 + L1PB4 LINE L1 6118 6155 -1 2348 60 3 30 chr10 15994906 15995235 -124321530 + AluSp SINE Alu 15 313 0 2319 88 0 7 chr10 15995272 15995567 -124321198 + AluSx SINE Alu 11 303 -9 1687 196 129 39 chr10 15995567 15996000 -124320765 + MLT1E LTR MaLR 122 593 0 2324 101 0 13 chr10 15996068 15996375 -124320390 + AluSg SINE Alu 1 303 -7 2367 69 3 20 chr10 15996384 15996687 -124320078 + AluY SINE Alu 2 299 -12 21 36 0 0 chr10 15996694 15996722 -124320043 + AT_rich Low_complexity Low_complexity 1 28 0 2106 117 17 0 chr10 15996738 15997029 -124319736 + AluSx SINE Alu 2 297 -15 2248 102 7 10 chr10 15997839 15998142 -124318623 + AluSx SINE Alu 1 302 -10 1850 100 4 0 chr10 15998806 15999046 -124317719 + AluSg SINE Alu 62 302 -8 1820 166 13 3 chr10 15999542 15999850 -124316915 + AluJb SINE Alu 1 311 -1 2175 131 0 13 chr10 15999896 16000209 -124316556 - AluSg SINE Alu -1 309 1 800 160 15 0 chr10 16000435 16000566 -124316199 - FLAM_C SINE Alu 0 133 1 2145 122 3 7 chr10 16000989 16001284 -124315481 - AluSx SINE Alu -18 294 1 455 189 102 2 chr10 16001404 16001522 -124315243 - L1MC1 LINE L1 -6 6327 6207 2343 100 3 3 chr10 16001528 16001837 -124314928 - AluSq SINE Alu -4 309 1 2001 144 10 13 chr10 16002692 16002997 -124313768 - AluJo SINE Alu -8 304 1 204 343 14 0 chr10 16003232 16003305 -124313460 + L2 LINE L2 2530 2603 -711 1945 127 3 17 chr10 16003809 16004100 -124312665 + AluJb SINE Alu 1 287 -25 288 0 0 0 chr10 16004302 16004334 -124312431 + (TTG)n Simple_repeat Simple_repeat 2 33 0 489 177 5 48 chr10 16004970 16005062 -124311703 + GA-rich Low_complexity Low_complexity 3 85 -95 1960 101 26 4 chr10 16005062 16005329 -124311436 + AluSq SINE Alu 9 281 -32 489 177 5 48 chr10 16005329 16005422 -124311343 + GA-rich Low_complexity Low_complexity 85 180 0 218 256 0 0 chr10 16005422 16005465 -124311300 + polypurine Low_complexity Low_complexity 2 44 0 536 199 19 6 chr10 16005466 16005627 -124311138 + GA-rich Low_complexity Low_complexity 2 164 0 2209 138 0 0 chr10 16007108 16007420 -124309345 - AluSx SINE Alu 0 312 1 3421 54 42 2 chr10 16007973 16008360 -124308405 + MLT2A1 LTR ERVL 1 408 -36 459 52 0 0 chr10 16008360 16008418 -124308347 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 3421 54 42 2 chr10 16008418 16008457 -124308308 + MLT2A1 LTR ERVL 408 444 0 423 0 0 0 chr10 16008973 16009020 -124307745 + (TA)n Simple_repeat Simple_repeat 1 47 0 204 40 0 0 chr10 16009234 16009259 -124307506 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1879 127 4 4 chr10 16009265 16009533 -124307232 - AluJb SINE Alu -44 268 1 1018 163 0 0 chr10 16009625 16009791 -124306974 - FRAM SINE Alu 0 166 1 215 211 0 0 chr10 16010605 16010643 -124306122 + polypyrimidine Low_complexity Low_complexity 2 39 0 1652 156 31 21 chr10 16011390 16011679 -124305086 + AluJb SINE Alu 5 296 -16 1892 137 25 18 chr10 16012685 16013004 -124303761 + AluJo SINE Alu 1 321 0 3268 201 18 28 chr10 16013513 16013560 -124303205 + L1MB8 LINE L1 5444 5490 -688 2554 64 0 0 chr10 16013560 16013857 -124302908 + AluY SINE Alu 1 297 -14 3268 201 18 28 chr10 16013857 16014481 -124302284 + L1MB8 LINE L1 5490 6110 -68 2169 139 0 0 chr10 16014481 16014790 -124301975 - AluSx SINE Alu -3 309 1 3268 201 18 28 chr10 16014790 16014839 -124301926 + L1MB8 LINE L1 6110 6158 -20 864 238 120 34 chr10 16015510 16015900 -124300865 + MLT1J2 LTR MaLR 28 511 0 1885 156 6 16 chr10 16015921 16016236 -124300529 + AluJo SINE Alu 1 312 0 414 316 40 43 chr10 16016553 16016806 -124299959 + L1 LINE L1 4783 5034 -1112 346 280 70 10 chr10 16016807 16016907 -124299858 + L2 LINE L2 3208 3313 0 647 300 9 26 chr10 16017203 16017334 -124299431 + MIR SINE MIR 34 161 -101 1863 141 7 27 chr10 16017334 16017633 -124299132 + AluJo SINE Alu 1 293 -19 647 300 9 26 chr10 16017633 16017734 -124299031 + MIR SINE MIR 161 262 0 358 231 171 17 chr10 16017785 16017902 -124298863 + L2 LINE L2 3177 3311 -2 357 125 0 0 chr10 16018233 16018289 -124298476 + (CAT)n Simple_repeat Simple_repeat 1 56 0 1068 136 0 0 chr10 16018290 16018466 -124298299 + (CACCAT)n Simple_repeat Simple_repeat 1 176 0 945 234 46 38 chr10 16018496 16018735 -124298030 - MIR SINE MIR -21 241 1 226 225 25 12 chr10 16018757 16018837 -124297928 - L1M LINE L1 -2411 5397 5317 2301 94 7 0 chr10 16019919 16020216 -124296549 - AluSp SINE Alu -14 299 1 2367 102 0 3 chr10 16020602 16020906 -124295859 + AluSx SINE Alu 1 303 -9 197 284 30 0 chr10 16021567 16021634 -124295131 - MIR SINE MIR -68 140 72 460 267 26 14 chr10 16021710 16021878 -124294887 + L1MC/D LINE L1 5634 5810 -311 501 67 56 56 chr10 16021891 16021980 -124294785 - LTR9 LTR ERV1 -86 526 438 542 143 105 83 chr10 16022010 16022143 -124294622 + AluJo SINE Alu 1 136 -176 2348 49 7 14 chr10 16022492 16022810 -124293955 - AluY SINE Alu 0 316 1 336 250 12 0 chr10 16023304 16023384 -124293381 - Tigger7 DNA MER2_type 0 2487 2407 1899 151 0 50 chr10 16024224 16024541 -124292224 - AluJo SINE Alu -11 301 1 2211 180 84 0 chr10 16024553 16024970 -124291795 - Tigger7 DNA MER2_type -273 460 9 2421 136 8 8 chr10 16024970 16025344 -124291421 + THE1C LTR MaLR 1 374 -1 2396 78 3 0 chr10 16025475 16025769 -124290996 + AluSg SINE Alu 1 295 -15 2290 99 3 3 chr10 16026891 16027194 -124289571 + AluSq SINE Alu 1 303 -10 729 127 42 35 chr10 16027548 16027690 -124289075 - MLT1A2 LTR MaLR 0 374 232 663 186 28 28 chr10 16027719 16027864 -124288901 - MLT1A2 LTR MaLR -214 151 7 1881 94 17 74 chr10 16028255 16028585 -124288180 - AluSx SINE Alu 0 314 2 190 214 24 0 chr10 16028853 16028895 -124287870 - L2 LINE L2 -223 3049 3007 1914 130 7 10 chr10 16229273 16229581 -124087184 - AluSx SINE Alu -5 307 1 1340 141 38 55 chr10 16230136 16230427 -124086338 + AluSx SINE Alu 1 286 -16 274 132 44 15 chr10 16230743 16230811 -124085954 + L1ME4a LINE L1 5990 6059 -62 549 250 98 27 chr10 16231479 16231653 -124085112 - MIR SINE MIR -29 233 44 1556 161 0 40 chr10 16231653 16231976 -124084789 - AluSx SINE Alu -2 310 1 1676 159 14 7 chr10 16233056 16233364 -124083401 + AluJb SINE Alu 1 312 0 434 306 8 8 chr10 16233581 16233702 -124083063 + MIR3 SINE MIR 41 161 -47 1782 113 32 68 chr10 16233979 16234288 -124082477 - AluSg SINE Alu -12 298 1 2131 115 3 3 chr10 16235577 16235881 -124080884 - AluSq SINE Alu -9 304 1 220 91 45 0 chr10 16237045 16237089 -124079676 + CT-rich Low_complexity Low_complexity 1 46 0 205 304 0 32 chr10 16237143 16237268 -124079497 + T-rich Low_complexity Low_complexity 4 124 0 225 181 14 28 chr10 16237272 16237344 -124079421 + CT-rich Low_complexity Low_complexity 2 72 0 331 262 36 95 chr10 16237457 16237678 -124079087 + L1ME LINE L1 780 987 -5083 2329 90 7 0 chr10 16239324 16239634 -124077131 - AluSq SINE Alu -1 312 1 209 277 0 0 chr10 16239989 16240036 -124076729 - MIR3 SINE MIR -50 158 112 1902 117 0 0 chr10 16241740 16242013 -124074752 - AluSx SINE Alu -1 311 39 327 250 28 40 chr10 16243306 16243482 -124073283 + (CCCCG)n Simple_repeat Simple_repeat 1 174 0 1594 161 28 7 chr10 16243815 16244106 -124072659 + AluJo SINE Alu 1 297 -15 217 270 32 0 chr10 16244833 16244896 -124071869 - L2 LINE L2 -4 3309 3245 706 168 90 0 chr10 16245501 16245656 -124071109 + MER53 DNA DNA 1 169 -20 1160 150 26 30 chr10 16245656 16245889 -124070876 - AluJo SINE Alu -16 296 65 261 178 53 12 chr10 16246384 16246465 -124070300 - AluJo SINE Alu -6 296 246 289 250 15 0 chr10 16246719 16246787 -124069978 - L2 LINE L2 -4 3309 3241 911 166 0 41 chr10 16246876 16247045 -124069720 - AluJo SINE Alu -64 248 87 365 252 50 36 chr10 16247045 16247184 -124069581 - MER5B DNA MER1_type -36 142 2 1912 127 7 3 chr10 16247640 16247924 -124068841 - AluSx SINE Alu -27 285 1 280 263 222 10 chr10 16248145 16248244 -124068521 + MER5A DNA MER1_type 47 166 -23 2707 204 93 30 chr10 16249970 16250100 -124066665 + L1MC3 LINE L1 6994 7114 -671 2229 123 33 36 chr10 16250100 16250465 -124066300 + THE1B LTR MaLR 1 364 0 2707 204 93 30 chr10 16250465 16251079 -124065686 + L1MC3 LINE L1 7114 7785 0 1920 106 31 10 chr10 16251173 16251465 -124065300 + AluSx SINE Alu 1 298 -14 2047 108 3 7 chr10 16252243 16252538 -124064227 - AluSx SINE Alu -13 299 6 353 173 28 123 chr10 16252548 16252754 -124064011 - AluSg SINE Alu -132 168 1 1613 80 13 0 chr10 16253075 16253300 -124063465 + AluSq SINE Alu 86 313 0 182 207 35 86 chr10 16253373 16253431 -124063334 - MER5C DNA MER1_type -267 57 3 385 281 74 7 chr10 16253861 16253996 -124062769 + MIR SINE MIR 7 150 -112 244 86 0 0 chr10 16255141 16255176 -124061589 - AluSx SINE Alu -6 294 260 1500 111 13 9 chr10 16255179 16255405 -124061360 - AluSx SINE Alu -85 227 1 1777 145 11 0 chr10 16256481 16256763 -124060002 + AluJb SINE Alu 3 287 -25 1103 107 0 0 chr10 16257019 16257168 -124059597 + AluSq/x SINE Alu 1 149 -163 441 62 0 62 chr10 16257299 16257390 -124059375 - AluSp/q SINE Alu 0 313 233 874 130 0 0 chr10 16257392 16257523 -124059242 + AluSg/x SINE Alu 170 300 -10 1595 151 34 31 chr10 16257879 16258171 -124058594 + AluJo SINE Alu 3 295 -17 2236 98 3 3 chr10 16258314 16258621 -124058144 - AluSq SINE Alu -6 307 1 180 266 101 25 chr10 16258911 16258990 -124057775 - L3 LINE CR1 -60 1517 1433 2112 107 0 3 chr10 16259319 16259617 -124057148 + AluSx SINE Alu 2 298 -14 1472 181 41 0 chr10 16260295 16260588 -124056177 - AluJo SINE Alu -7 305 1 402 174 0 47 chr10 16260856 16260942 -124055823 - MER74A LTR ERVL 0 558 477 1903 114 24 10 chr10 16260946 16261236 -124055529 + AluSx SINE Alu 1 294 -18 2051 200 37 29 chr10 16261272 16261756 -124055009 - MER74A LTR ERVL -70 488 1 195 259 17 35 chr10 16261815 16261873 -124054892 + MIR3 SINE MIR 119 175 -33 46 45 0 0 chr10 16262702 16262769 -124053996 + AT_rich Low_complexity Low_complexity 1 67 0 2271 86 0 0 chr10 16262784 16263076 -124053689 - AluSq SINE Alu -21 292 1 994 119 11 11 chr10 16263487 16263663 -124053102 - AluSq SINE Alu 0 313 138 3914 93 6 4 chr10 16263829 16264375 -124052390 - L1PB1 LINE L1 -4 6147 5601 917 84 8 0 chr10 16264375 16264499 -124052266 - L1PB1 LINE L1 -1 6150 6019 2293 103 3 0 chr10 16264867 16265179 -124051586 - AluSp SINE Alu 0 313 1 892 189 60 27 chr10 16265763 16266007 -124050758 + MER58B DNA MER1_type 1 327 -14 1942 101 41 0 chr10 16266016 16266284 -124050481 + AluSg SINE Alu 12 290 -20 392 299 143 24 chr10 16266610 16266861 -124049904 - L2 LINE L2 -75 3238 2958 1457 153 4 0 chr10 16266978 16267207 -124049558 - AluJb SINE Alu -82 230 1 254 299 77 60 chr10 16267233 16267350 -124049415 + L2 LINE L2 3151 3269 -3 767 263 10 24 chr10 16267381 16267590 -124049175 - MER3 DNA MER1_type -3 206 1 187 202 107 24 chr10 16267714 16267798 -124048967 + L2 LINE L2 2779 2869 -445 228 290 43 65 chr10 16267848 16267986 -124048779 + L2 LINE L2 2935 3069 -244 1583 189 96 6 chr10 16268017 16268350 -124048415 - MLT1A1 LTR MaLR 0 365 3 342 243 28 117 chr10 16268352 16268538 -124048227 - L1MC5 LINE L1 -62 7899 7751 1549 179 0 17 chr10 16268538 16268839 -124047926 - AluJb SINE Alu -11 301 6 342 243 28 117 chr10 16268839 16268969 -124047796 - L1MC5 LINE L1 -210 7751 7611 344 288 70 62 chr10 16269003 16269260 -124047505 + L2 LINE L2 3051 3309 -4 280 373 0 52 chr10 16269423 16269557 -124047208 - L2 LINE L2 -10 3262 3136 25 0 0 0 chr10 16269605 16269630 -124047135 + AT_rich Low_complexity Low_complexity 1 25 0 240 307 79 74 chr10 16269956 16270145 -124046620 + LTR67 LTR ERVL 102 291 -266 348 209 191 0 chr10 16270176 16270286 -124046479 + LTR67 LTR ERVL 404 534 -23 2226 78 0 66 chr10 16270962 16271296 -124045469 - AluSq SINE Alu -1 312 1 23 0 0 0 chr10 16272344 16272367 -124044398 + AT_rich Low_complexity Low_complexity 1 23 0 2075 129 0 3 chr10 16273114 16273417 -124043348 - AluSx SINE Alu -10 302 1 2013 117 3 25 chr10 16274176 16274493 -124042272 - AluSq SINE Alu -3 310 1 21 36 0 0 chr10 16274597 16274625 -124042140 + AT_rich Low_complexity Low_complexity 1 28 0 2067 120 7 0 chr10 16274977 16275278 -124041487 - AluSx SINE Alu -9 303 1 21 36 0 0 chr10 16275728 16275756 -124041009 + AT_rich Low_complexity Low_complexity 1 28 0 1914 80 65 0 chr10 16275757 16276048 -124040717 + AluY SINE Alu 1 308 0 211 365 29 36 chr10 16276336 16276473 -124040292 + MIR SINE MIR 13 148 -114 234 293 57 50 chr10 16276790 16276930 -124039835 + MIR SINE MIR 122 262 0 1707 219 15 55 chr10 16277139 16277239 -124039526 + LTR40b LTR ERVL 3 105 -357 1711 112 3 93 chr10 16277239 16277562 -124039203 - AluSq SINE Alu -19 294 1 1707 219 15 55 chr10 16277562 16277936 -124038829 + LTR40b LTR ERVL 105 458 -4 1163 86 6 12 chr10 16278241 16278403 -124038362 + AluSq SINE Alu 1 161 -152 334 48 0 0 chr10 16278522 16278564 -124038201 - AluY SINE Alu -260 42 1 408 335 11 28 chr10 16278896 16279072 -124037693 - L3 LINE CR1 -156 1421 1249 518 188 0 118 chr10 16280614 16280758 -124036007 - L1ME1 LINE L1 0 6164 6038 256 264 184 75 chr10 16280804 16280978 -124035787 + MIR SINE MIR 30 222 -40 265 240 145 68 chr10 16281437 16281658 -124035107 - L1ME4a LINE L1 -46 6075 5838 527 338 26 22 chr10 16282235 16282463 -124034302 + L1MC/D LINE L1 5435 5663 -2145 2036 122 3 13 chr10 16282953 16283265 -124033500 - AluSg SINE Alu -1 309 1 23 0 0 0 chr10 16283338 16283361 -124033404 + AT_rich Low_complexity Low_complexity 1 23 0 1925 117 3 14 chr10 16283376 16283666 -124033099 - AluJo SINE Alu -25 287 1 682 81 0 0 chr10 16284884 16284983 -124031782 + L1PB2 LINE L1 5925 6023 -128 2033 135 0 0 chr10 16285002 16285305 -124031460 - AluSx SINE Alu -9 303 1 5237 118 28 14 chr10 16285530 16286340 -124030425 - L1PA15 LINE L1 0 6165 5344 2004 128 7 0 chr10 16288431 16288728 -124028037 + AluSx SINE Alu 1 299 -13 2157 100 0 31 chr10 16288746 16289066 -124027699 + AluSg SINE Alu 1 310 0 1607 168 0 39 chr10 16290793 16291102 -124025663 + AluJb SINE Alu 6 302 -10 2093 117 3 0 chr10 16291889 16292188 -124024577 - AluSx SINE Alu -12 300 1 1834 162 0 3 chr10 16292201 16292503 -124024262 - AluSx SINE Alu -11 301 1 509 239 244 38 chr10 16292704 16292917 -124023848 + MIR SINE MIR 6 262 0 1824 157 0 3 chr10 16292942 16293241 -124023524 + AluJb SINE Alu 1 298 -14 1596 128 0 33 chr10 16293254 16293527 -124023238 + L1PA15 LINE L1 5902 6165 0 2129 86 0 20 chr10 16293718 16294021 -124022744 - AluSq SINE Alu -16 297 1 1331 180 90 14 chr10 16294942 16295220 -124021545 + AluJb SINE Alu 2 300 -12 389 290 91 39 chr10 16295296 16295527 -124021238 + MLT1K LTR MaLR 332 574 -14 1936 114 11 0 chr10 16295634 16295906 -124020859 + AluSx SINE Alu 1 275 -37 1243 124 0 0 chr10 16296282 16296459 -124020306 - AluSg/x SINE Alu -2 310 134 2232 99 3 3 chr10 16296459 16296763 -124020002 - AluSx SINE Alu -8 304 1 292 276 29 67 chr10 16296851 16296956 -124019809 - MIR SINE MIR -70 138 38 203 182 0 0 chr10 16297302 16297335 -124019430 + (TATATG)n Simple_repeat Simple_repeat 2 34 0 371 311 0 0 chr10 16297335 16297425 -124019340 + L1MC4 LINE L1 6614 6703 -1339 344 265 24 12 chr10 16297399 16297482 -124019283 + L1MCa LINE L1 1995 2078 -4348 * 1913 116 0 20 chr10 16297537 16297830 -124018935 - AluSx SINE Alu -25 287 1 2144 103 0 20 chr10 16298787 16299089 -124017676 + AluSx SINE Alu 1 296 -16 1548 159 12 40 chr10 16299122 16299443 -124017322 + AluJb SINE Alu 1 312 0 1890 130 0 14 chr10 16300535 16300865 -124015900 + AluJb SINE Alu 1 312 0 1485 170 62 7 chr10 16302467 16302756 -124014009 - AluJo SINE Alu -7 305 1 209 277 117 36 chr10 16302991 16303128 -124013637 + L2 LINE L2 2625 2772 -542 475 255 83 2 chr10 16303257 16303425 -124013340 - MIR SINE MIR -57 151 3 1874 151 0 19 chr10 16303503 16303814 -124012951 - AluJb SINE Alu -7 305 1 239 273 107 33 chr10 16304105 16304226 -124012539 + MIR SINE MIR 112 241 -21 926 179 114 25 chr10 16304401 16304602 -124012163 - MER20 DNA MER1_type 0 219 1 208 281 0 0 chr10 16304733 16304797 -124011968 + CT-rich Low_complexity Low_complexity 1 64 0 1446 196 14 4 chr10 16305523 16305798 -124010967 + AluJo SINE Alu 1 278 -34 192 316 75 30 chr10 16305868 16306001 -124010764 - L2 LINE L2 -581 2733 2595 1161 44 17 17 chr10 16307364 16307413 -124009352 + (TCTA)n Simple_repeat Simple_repeat 1 229 0 1161 44 17 17 chr10 16307413 16307593 -124009172 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 1597 144 34 45 chr10 16307677 16307969 -124008796 - AluJo SINE Alu -23 289 1 1392 179 19 0 chr10 16308217 16308485 -124008280 + AluJb SINE Alu 28 300 -12 321 68 0 0 chr10 16308930 16308974 -124007791 + (TG)n Simple_repeat Simple_repeat 2 45 0 1250 211 4 8 chr10 16309019 16309266 -124007499 + AluJb SINE Alu 1 246 -66 234 0 0 0 chr10 16309266 16309292 -124007473 + (A)n Simple_repeat Simple_repeat 1 26 0 230 343 68 41 chr10 16309367 16309513 -124007252 - L2 LINE L2 0 3272 3123 1777 158 7 10 chr10 16310271 16310574 -124006191 + AluJb SINE Alu 1 302 -10 2216 107 0 0 chr10 16311010 16311319 -124005446 + AluSc SINE Alu 1 309 0 492 304 242 29 chr10 16311830 16312445 -124004320 - L2 LINE L2 -479 2835 2090 1839 115 41 0 chr10 16312454 16312760 -124004005 + AluSx SINE Alu 1 317 0 1634 186 0 16 chr10 16312789 16313106 -124003659 - AluJb SINE Alu 0 312 1 37584 70 10 5 chr10 16313615 16318502 -123998263 + L1PA5 LINE L1 11 4919 -1227 3660 50 0 0 chr10 16318502 16318939 -123997826 + L1PA5 LINE L1 5703 6141 -13 2011 112 0 34 chr10 16318976 16319272 -123997493 - AluSx SINE Alu -14 298 13 668 165 46 57 chr10 16319317 16319511 -123997254 + L1MA7 LINE L1 6098 6289 -2 2075 116 7 0 chr10 16319864 16320166 -123996599 - AluSg SINE Alu -6 304 1 1577 198 0 7 chr10 16320371 16320674 -123996091 - AluJo SINE Alu -11 301 1 671 193 91 136 chr10 16320792 16320917 -123995848 - MIR SINE MIR 0 262 154 2002 109 0 24 chr10 16320917 16321211 -123995554 - AluSq SINE Alu -25 288 2 671 193 91 136 chr10 16321211 16321350 -123995415 - MIR SINE MIR -108 154 10 1898 135 3 0 chr10 16321453 16321742 -123995023 - AluSq SINE Alu -21 292 3 2423 198 20 10 chr10 16322018 16322507 -123994258 + L1MB7 LINE L1 5573 6066 -118 200 343 20 49 chr10 16323224 16323326 -123993439 - L2 LINE L2 -186 3086 2988 1757 123 0 0 chr10 16323326 16323570 -123993195 + AluSc SINE Alu 1 244 -65 254 28 0 28 chr10 16323584 16323620 -123993145 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1179 128 0 17 chr10 16323620 16323800 -123992965 + AluSg/x SINE Alu 128 304 -8 2501 138 57 2 chr10 16324607 16325013 -123991752 + MSTA LTR MaLR 1 428 0 194 369 60 7 chr10 16325059 16325208 -123991557 - MIR3 SINE MIR -22 186 30 2059 120 10 0 chr10 16325268 16325569 -123991196 + AluSx SINE Alu 1 304 -8 337 221 0 0 chr10 16325647 16325715 -123991050 - MER82 DNA MER2_type -9 644 577 804 172 13 0 chr10 16325761 16325912 -123990853 - AluSg/x SINE Alu -4 306 154 1948 171 32 16 chr10 16325913 16326282 -123990483 - MER82 DNA MER2_type -278 375 1 572 137 0 20 chr10 16326386 16326488 -123990277 - AluJb SINE Alu 0 312 213 312 298 62 39 chr10 16326606 16326784 -123989981 + L2 LINE L2 2222 2403 -911 183 42 0 0 chr10 16326828 16326852 -123989913 + (GGGA)n Simple_repeat Simple_repeat 3 26 0 1245 199 0 15 chr10 16327261 16327527 -123989238 - AluJo SINE Alu 0 312 51 198 0 0 0 chr10 16328110 16328132 -123988633 + (TG)n Simple_repeat Simple_repeat 2 23 0 1520 161 40 4 chr10 16328132 16328405 -123988360 - AluJo SINE Alu -27 285 3 635 320 86 28 chr10 16328838 16329217 -123987548 - L2 LINE L2 -285 2987 2590 520 276 0 0 chr10 16329644 16329760 -123987005 + MIR SINE MIR 51 166 -96 1970 133 0 3 chr10 16329972 16330274 -123986491 - AluSq SINE Alu -12 301 1 2310 81 3 3 chr10 16330773 16331083 -123985682 - AluY SINE Alu -1 310 1 1624 80 0 61 chr10 16331085 16331397 -123985368 - AluSc SINE Alu -16 293 1 2301 82 3 3 chr10 16332599 16332904 -123983861 + AluSc SINE Alu 1 305 -4 2033 120 0 3 chr10 16333022 16333322 -123983443 - AluSx SINE Alu -13 299 1 918 75 0 0 chr10 16333361 16333481 -123983284 - AluJb SINE Alu -192 120 1 419 235 197 0 chr10 16333669 16333801 -123982964 + MER5A DNA MER1_type 14 171 -18 2211 96 0 13 chr10 16335372 16335684 -123981081 - AluY SINE Alu -3 308 1 1926 127 20 13 chr10 16335686 16335986 -123980779 - AluSx SINE Alu -10 302 1 197 343 67 62 chr10 16335989 16336199 -123980566 + L2 LINE L2 2976 3186 -86 966 82 0 0 chr10 16336611 16336757 -123980008 + (TGGA)n Simple_repeat Simple_repeat 3 148 0 1050 231 9 4 chr10 16336815 16337044 -123979721 + AluJo SINE Alu 1 230 -82 260 54 54 0 chr10 16337044 16337081 -123979684 + AluSx SINE Alu 96 134 -168 1068 130 6 40 chr10 16337113 16337290 -123979475 + AluSx SINE Alu 118 288 -22 28 0 0 0 chr10 16337295 16337323 -123979442 + AT_rich Low_complexity Low_complexity 1 28 0 1959 141 0 0 chr10 16339257 16339547 -123977218 + AluSx SINE Alu 1 290 -22 1728 150 42 0 chr10 16340132 16340418 -123976347 - AluJb SINE Alu -14 298 1 1963 122 26 16 chr10 16340481 16340785 -123975980 + AluSx SINE Alu 3 309 -3 306 295 0 0 chr10 16340908 16340986 -123975779 + (CA)n Simple_repeat Simple_repeat 2 79 0 326 215 29 27 chr10 16341234 16341311 -123975454 - L1MCa LINE L1 -1339 6983 2005 1886 226 46 83 chr10 16341313 16341739 -123975026 + L1ME2 LINE L1 5461 5901 -263 2077 113 7 0 chr10 16341739 16342040 -123974725 + AluSx SINE Alu 8 310 -2 2029 91 0 14 chr10 16342040 16342366 -123974399 + AluSx SINE Alu 1 322 0 1886 226 46 83 chr10 16342366 16342648 -123974117 + L1ME2 LINE L1 5899 6145 -19 239 249 44 105 chr10 16342697 16342926 -123973839 + L1MC4 LINE L1 7826 8040 -2 1840 151 0 0 chr10 16343025 16343316 -123973449 - AluJo SINE Alu -18 294 4 479 281 67 17 chr10 16343983 16344161 -123972604 + MIR SINE MIR 66 252 -10 1502 240 170 29 chr10 16344591 16344970 -123971795 + MLT1E2 LTR MaLR 4 486 -140 1443 215 11 4 chr10 16344970 16345274 -123971491 - AluJb SINE Alu 0 308 3 1502 240 170 29 chr10 16345274 16345439 -123971326 + MLT1E2 LTR MaLR 486 626 0 457 370 14 51 chr10 16345743 16346019 -123970746 - L3 LINE CR1 -463 1114 849 27 62 0 0 chr10 16346133 16346181 -123970584 + AT_rich Low_complexity Low_complexity 1 48 0 2024 112 0 0 chr10 16346459 16346735 -123970030 + AluSx SINE Alu 16 291 -21 1957 99 0 58 chr10 16347477 16347789 -123968976 + AluSx SINE Alu 11 304 -8 2491 160 42 43 chr10 16349600 16350106 -123966659 - MLT1D LTR MaLR 0 505 1 215 337 42 11 chr10 16350123 16350218 -123966547 + MIR3 SINE MIR 94 191 -17 1919 146 10 0 chr10 16350532 16350834 -123965931 + AluSx SINE Alu 1 305 -7 2057 123 3 0 chr10 16351170 16351463 -123965302 - AluSq SINE Alu -19 294 1 22 0 0 0 chr10 16351838 16351860 -123964905 + AT_rich Low_complexity Low_complexity 1 22 0 2202 78 0 3 chr10 16351960 16352278 -123964487 + AluY SINE Alu 1 317 0 212 59 29 0 chr10 16354244 16354278 -123962487 + (TA)n Simple_repeat Simple_repeat 1 35 0 213 39 0 0 chr10 16355279 16355305 -123961460 + (T)n Simple_repeat Simple_repeat 1 26 0 22 35 0 0 chr10 16356406 16356435 -123960330 + GC_rich Low_complexity Low_complexity 1 29 0 1951 176 127 9 chr10 16356830 16357263 -123959502 - MER31A LTR ERV1 0 485 2 577 251 23 41 chr10 16357264 16357435 -123959330 - MIR SINE MIR -78 184 17 1935 143 0 13 chr10 16357451 16357766 -123958999 + AluSx SINE Alu 1 311 -1 409 246 45 18 chr10 16358384 16358494 -123958271 - MIR SINE MIR -79 183 71 774 217 37 0 chr10 16358587 16358776 -123957989 + L1MD3 LINE L1 7799 7994 -1 1480 71 20 20 chr10 16358930 16359127 -123957638 - MER107 DNA MER1_type 0 197 1 198 103 0 0 chr10 16359794 16359823 -123956942 + (A)n Simple_repeat Simple_repeat 1 29 0 2292 93 3 0 chr10 16359958 16360259 -123956506 - AluSp SINE Alu -11 302 1 2259 90 7 7 chr10 16360754 16361064 -123955701 - AluSx SINE Alu -2 310 1 2132 128 0 3 chr10 16361412 16361724 -123955041 - AluSx SINE Alu -1 311 1 231 103 0 0 chr10 16361877 16361916 -123954849 + (T)n Simple_repeat Simple_repeat 1 39 0 1544 183 10 17 chr10 16362403 16362693 -123954072 - AluJo SINE Alu -24 288 1 23 0 0 0 chr10 16362850 16362873 -123953892 + AT_rich Low_complexity Low_complexity 1 23 0 1543 174 31 7 chr10 16363299 16363586 -123953179 - AluJo SINE Alu -16 296 3 1854 143 3 7 chr10 16363866 16364167 -123952598 - AluSx SINE Alu -12 300 1 2131 103 3 16 chr10 16364641 16364951 -123951814 - AluSx SINE Alu -6 306 1 1326 164 0 91 chr10 16365317 16365615 -123951150 + AluJo SINE Alu 38 308 -4 590 264 70 70 chr10 16365619 16365861 -123950904 + L2 LINE L2 3050 3291 -22 1192 176 5 0 chr10 16365934 16366150 -123950615 + AluJo SINE Alu 75 291 -21 1656 138 8 4 chr10 16366811 16367071 -123949694 + AluJo SINE Alu 15 275 -37 1914 130 7 10 chr10 16367245 16367553 -123949212 - AluSx SINE Alu -5 307 1 2075 120 0 7 chr10 16368108 16368409 -123948356 + AluSx SINE Alu 1 299 -13 2398 71 3 0 chr10 16368579 16368888 -123947877 - AluY SINE Alu -1 310 1 1126 277 108 42 chr10 16369248 16369778 -123946987 + MLT1K LTR MaLR 2 566 -22 1400 168 0 4 chr10 16369978 16370216 -123946549 + AluJo SINE Alu 1 237 -75 1557 124 81 42 chr10 16370421 16370704 -123946061 - AluJb SINE Alu -18 294 1 1696 138 7 21 chr10 16371675 16371965 -123944800 + AluJo SINE Alu 9 294 -18 930 175 12 6 chr10 16372641 16372801 -123943964 + FRAM SINE Alu 5 165 -1 1510 169 4 4 chr10 16372948 16373208 -123943557 + AluJb SINE Alu 1 260 -52 2042 100 0 17 chr10 16373393 16373724 -123943041 - AluSq SINE Alu 0 326 1 228 203 101 38 chr10 16373830 16373909 -123942856 + MIR SINE MIR 63 146 -116 889 230 0 0 chr10 16373909 16374074 -123942691 + FAM SINE Alu 1 165 -10 1953 120 0 17 chr10 16374074 16374375 -123942390 - AluSx SINE Alu -16 296 1 371 174 90 35 chr10 16374376 16374501 -123942264 - MER106B DNA MER1_type -96 963 6 1586 132 0 97 chr10 16374665 16374976 -123941789 + AluJb SINE Alu 2 282 -30 893 9 0 9 chr10 16374977 16375084 -123941681 + (TAGA)n Simple_repeat Simple_repeat 4 109 0 954 228 19 14 chr10 16375283 16375308 -123941457 - MLT2C1 LTR ERVL -156 258 235 2439 62 3 0 chr10 16375308 16375612 -123941153 - AluY SINE Alu -6 305 1 954 228 19 14 chr10 16375612 16375837 -123940928 - MLT2C1 LTR ERVL -179 235 4 2860 211 37 31 chr10 16375837 16376139 -123940626 - ERVL LTR ERVL -4 5650 5351 1681 150 50 7 chr10 16376139 16376439 -123940326 + AluSq SINE Alu 1 313 0 2860 211 37 31 chr10 16376439 16376933 -123939832 - ERVL LTR ERVL -303 5351 4881 673 255 55 0 chr10 16376925 16377070 -123939695 + HERV16 LTR ERVL 536 688 -4308 * 2169 101 3 0 chr10 16377303 16377599 -123939166 - AluSx SINE Alu -15 297 1 186 143 0 0 chr10 16377837 16377872 -123938893 + (TTC)n Simple_repeat Simple_repeat 2 36 0 793 108 63 1 chr10 16377921 16378056 -123938709 - L1PA8 LINE L1 -269 5897 5751 27 49 0 0 chr10 16378157 16378198 -123938567 + AT_rich Low_complexity Low_complexity 1 41 0 819 191 13 0 chr10 16379062 16379214 -123937551 - AluY SINE Alu -23 288 135 363 261 53 100 chr10 16379272 16379652 -123937113 + L1ME4a LINE L1 5728 6089 -32 1578 170 40 0 chr10 16379724 16380001 -123936764 + AluJb SINE Alu 1 288 -24 243 0 0 0 chr10 16380009 16380036 -123936729 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 451 347 63 8 chr10 16380277 16380516 -123936249 + L1ME1 LINE L1 5355 5606 -515 415 259 113 18 chr10 16380609 16380864 -123935901 + L1ME1 LINE L1 5679 5946 -224 251 174 0 0 chr10 16380871 16380917 -123935848 - MLT2C1 LTR ERVL -7 390 345 1392 204 142 50 chr10 16380944 16381381 -123935384 - MLT2B1 LTR ERVL -43 477 1 261 0 0 0 chr10 16381390 16381432 -123935333 + (TG)n Simple_repeat Simple_repeat 1 71 0 261 0 0 0 chr10 16381432 16381461 -123935304 + (TG)n Simple_repeat Simple_repeat 2 30 0 1809 114 33 0 chr10 16381670 16381992 -123934773 + AluSg SINE Alu 1 331 0 308 183 28 28 chr10 16382083 16382154 -123934611 + L1ME4a LINE L1 6047 6117 -4 2032 128 30 0 chr10 16382573 16382870 -123933895 + AluY SINE Alu 1 306 -5 207 0 0 0 chr10 16383024 16383047 -123933718 + (TC)n Simple_repeat Simple_repeat 2 24 0 258 32 0 0 chr10 16383049 16383080 -123933685 + (CA)n Simple_repeat Simple_repeat 1 31 0 16409 165 40 19 chr10 16383109 16385636 -123931129 + L1MA2 LINE L1 15 2487 -5236 2724 129 0 17 chr10 16385636 16386048 -123930717 + L1PA13 LINE L1 5759 6163 0 16409 165 40 19 chr10 16386048 16387979 -123928786 + L1MA2 LINE L1 2487 4376 -3347 2498 69 0 0 chr10 16387979 16388283 -123928482 - AluY SINE Alu -7 304 1 16409 165 40 19 chr10 16388283 16391020 -123925745 + L1MA2 LINE L1 4376 7723 0 244 236 18 0 chr10 16391362 16391417 -123925348 - L1MEd LINE L1 -5473 646 591 322 232 80 73 chr10 16391738 16391889 -123924876 - L1MEd LINE L1 -5966 153 2 339 363 66 6 chr10 16392405 16392587 -123924178 + MIR3 SINE MIR 15 207 -1 2219 93 3 7 chr10 16392747 16393038 -123923727 - AluSg SINE Alu -20 290 1 1464 155 0 74 chr10 16393121 16393392 -123923373 - AluJo SINE Alu -27 285 35 223 325 25 12 chr10 16393419 16393499 -123923266 - L2 LINE L2 -2 3311 3231 244 224 34 22 chr10 16393915 16394048 -123922717 + MIR SINE MIR 2 185 -77 1921 215 24 19 chr10 16394338 16394836 -123921929 + L1P LINE L1 4793 5293 -858 207 0 0 0 chr10 16394979 16395002 -123921763 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 829 250 2 9 chr10 16395002 16395202 -123921563 - L1PB4 LINE L1 -14 6142 5944 2338 106 0 0 chr10 16395202 16395505 -123921260 + AluSx SINE Alu 2 304 -8 1786 117 92 7 chr10 16396946 16397228 -123919537 + AluSx SINE Alu 7 312 0 2161 186 5 18 chr10 16397591 16397983 -123918782 - MLT1B LTR MaLR -2 388 2 2361 92 0 16 chr10 16397993 16398298 -123918467 + AluSx SINE Alu 1 300 -12 275 350 51 0 chr10 16398339 16398456 -123918309 - MIR3 SINE MIR -7 201 79 3264 106 34 61 chr10 16399144 16399190 -123917575 - MER75 DNA T2_type 0 514 468 2151 137 3 13 chr10 16399190 16399209 -123917556 - AluSx SINE Alu 0 312 294 180 0 0 0 chr10 16399209 16399229 -123917536 + (TA)n Simple_repeat Simple_repeat 1 20 0 2151 137 3 13 chr10 16399229 16399524 -123917241 - AluSx SINE Alu -18 294 1 3264 106 34 61 chr10 16399524 16399613 -123917152 - MER75 DNA T2_type -46 468 378 2355 81 7 13 chr10 16399613 16399921 -123916844 + AluSq SINE Alu 1 306 -7 3264 106 34 61 chr10 16399921 16400311 -123916454 - MER75 DNA T2_type -136 378 2 569 274 81 38 chr10 16401095 16401464 -123915301 + L1ME LINE L1 1324 1708 -4688 * 1962 263 52 61 chr10 16401463 16401775 -123914990 + L1ME LINE L1 3281 3594 -2621 2304 86 3 3 chr10 16401775 16402076 -123914689 + AluY SINE Alu 1 301 -10 1962 263 52 61 chr10 16402076 16402810 -123913955 + L1ME LINE L1 3594 4318 -1897 275 180 40 0 chr10 16402965 16403015 -123913750 - AluJb SINE Alu -10 292 241 2276 130 54 25 chr10 16403015 16403369 -123913396 + THE1B LTR MaLR 1 364 0 1454 171 0 28 chr10 16403369 16403621 -123913144 - AluJb SINE Alu -67 245 1 665 258 45 93 chr10 16403688 16404064 -123912701 + L1ME LINE L1 5334 5691 -542 3618 178 13 5 chr10 16404926 16405526 -123911239 + MER6A DNA MER2_type 1 605 0 1473 179 0 37 chr10 16405769 16406042 -123910723 - AluJb SINE Alu -49 263 1 1042 176 24 4 chr10 16406495 16406777 -123909988 + L1MB4 LINE L1 5175 5468 -712 3738 63 0 0 chr10 16406777 16407221 -123909544 - L1PA7 LINE L1 -2 6152 5709 3616 162 36 40 chr10 16407221 16407944 -123908821 + L1MB4 LINE L1 5460 6180 0 266 241 36 0 chr10 16408155 16408238 -123908527 - MER114 LTR ERV 0 648 563 676 181 52 0 chr10 16408241 16408357 -123908408 + FLAM_A SINE Alu 13 134 -8 1375 174 103 116 chr10 16408359 16408555 -123908210 - MER114 LTR ERV -88 560 363 1694 174 14 7 chr10 16408555 16408842 -123907923 + AluJb SINE Alu 1 289 -23 1375 174 103 116 chr10 16408842 16409208 -123907557 - MER114 LTR ERV -285 363 5 25 65 0 0 chr10 16409252 16409298 -123907467 + AT_rich Low_complexity Low_complexity 1 46 0 577 145 0 0 chr10 16409367 16409450 -123907315 + AluSg/x SINE Alu 215 297 -15 22 35 0 0 chr10 16409623 16409652 -123907113 + AT_rich Low_complexity Low_complexity 1 29 0 1772 109 8 19 chr10 16409658 16409924 -123906841 - AluSg SINE Alu -11 299 37 228 167 21 42 chr10 16409928 16409976 -123906789 - MER94 DNA DNA -87 47 1 553 260 12 24 chr10 16409977 16410146 -123906619 + L1ME LINE L1 5685 5851 -380 215 179 0 0 chr10 16410146 16410185 -123906580 + MER5B DNA MER1_type 9 47 -131 4764 107 283 108 chr10 16410220 16411678 -123905087 - pTR5 LTR ERV1 0 2438 62 544 108 0 0 chr10 16412355 16412429 -123904336 - MADE1 DNA Mariner -1 79 6 389 250 164 0 chr10 16412641 16412757 -123904008 - MER63 DNA MER1_type -300 762 2 332 329 82 18 chr10 16413831 16414050 -123902715 - L1MC4a LINE L1 -255 5915 5683 2909 0 0 0 chr10 16414127 16414434 -123902331 + AluYa5 SINE Alu 1 307 -4 834 89 32 0 chr10 16414600 16414724 -123902041 - AluSq/x SINE Alu -184 128 1 2793 17 0 0 chr10 16414754 16415055 -123901710 - AluYa5 SINE Alu -10 301 1 435 78 188 0 chr10 16415078 16415142 -123901623 - MADE1 DNA Mariner -3 77 2 256 188 25 88 chr10 16416704 16416784 -123899981 + MER5A DNA MER1_type 114 188 -1 1980 100 64 4 chr10 16416863 16417143 -123899622 + AluSc SINE Alu 1 297 -12 2151 132 0 0 chr10 16417191 16417487 -123899278 + AluSx SINE Alu 1 296 -16 226 239 0 0 chr10 16417616 16417662 -123899103 - Charlie8 DNA MER1_type -6 2411 2366 1742 193 0 7 chr10 16418211 16418517 -123898248 - AluJb SINE Alu -8 304 1 2324 96 0 3 chr10 16418640 16418942 -123897823 - AluSx SINE Alu -11 301 1 801 248 86 0 chr10 16419063 16419285 -123897480 - MIR SINE MIR -4 258 18 664 290 95 12 chr10 16419761 16420152 -123896613 - L1MC4a LINE L1 -481 5681 5255 1795 155 7 0 chr10 16420194 16420471 -123896294 + AluSx SINE Alu 1 279 -33 911 234 56 14 chr10 16420513 16420727 -123896038 + MIR SINE MIR 16 238 -24 1459 206 7 14 chr10 16420849 16421136 -123895629 - AluJo SINE Alu -27 285 1 592 233 70 38 chr10 16421320 16421567 -123895198 - HERVL LTR ERVL -1138 4347 4107 440 292 0 9 chr10 16421595 16421708 -123895057 + LTR33 LTR ERVL 108 219 -302 2343 104 7 0 chr10 16422655 16422962 -123893803 + AluSx SINE Alu 1 309 -3 393 331 45 19 chr10 16423304 16423461 -123893304 + L2 LINE L2 3153 3313 0 1751 195 126 29 chr10 16423587 16424039 -123892726 + MLT1D LTR MaLR 1 496 -9 316 236 72 40 chr10 16424264 16424486 -123892279 + MLT1K LTR MaLR 280 540 -48 2665 137 34 5 chr10 16424587 16425003 -123891762 + MSTA LTR MaLR 1 428 0 593 297 84 4 chr10 16425606 16425869 -123890896 - MER102a DNA MER1_type -6 324 41 1595 153 28 17 chr10 16426590 16426877 -123889888 - L1MB3 LINE L1 -1 6182 5893 2140 121 0 0 chr10 16426888 16427178 -123889587 + AluSx SINE Alu 1 290 -22 316 314 0 10 chr10 16427205 16427307 -123889458 - L2 LINE L2 0 3313 3213 435 331 115 22 chr10 16427363 16427389 -123889376 - L2 LINE L2 -963 2351 2329 1809 145 39 0 chr10 16427389 16427671 -123889094 + AluSx SINE Alu 1 293 -19 435 331 115 22 chr10 16427671 16428000 -123888765 - L2 LINE L2 -985 2329 1963 796 95 0 9 chr10 16428082 16428187 -123888578 - FLAM_C SINE Alu -19 124 21 433 284 87 84 chr10 16429245 16429590 -123887175 - MLT1H LTR MaLR -201 348 3 255 31 0 0 chr10 16430018 16430050 -123886715 + (TC)n Simple_repeat Simple_repeat 1 32 0 225 0 0 0 chr10 16430049 16430074 -123886691 + (CA)n Simple_repeat Simple_repeat 1 25 0 * 2528 96 61 9 chr10 16430850 16431195 -123885570 - THE1B LTR MaLR -1 363 1 279 297 47 39 chr10 16431530 16431658 -123885107 + MIR SINE MIR 19 147 -115 1882 185 62 36 chr10 16431669 16432118 -123884647 + MER31B LTR ERV1 1 461 -5 235 343 29 19 chr10 16432122 16432227 -123884538 + MIR SINE MIR 154 259 -3 2529 71 3 0 chr10 16432235 16432545 -123884220 - AluY SINE Alu 0 311 1 302 368 65 0 chr10 16432607 16432762 -123884003 - L3 LINE CR1 -286 1291 1127 275 327 212 18 chr10 16433181 16433398 -123883367 - L3 LINE CR1 -827 750 492 928 178 12 12 chr10 16433712 16433875 -123882890 - FRAM SINE Alu -13 163 1 1740 182 65 56 chr10 16433899 16434361 -123882404 + MLT1C LTR MaLR 1 466 -1 2204 109 0 13 chr10 16434659 16434961 -123881804 + AluSx SINE Alu 1 298 -14 1711 123 4 4 chr10 16435835 16436070 -123880695 + AluSx SINE Alu 1 235 -77 1403 167 0 28 chr10 16436070 16436321 -123880444 - AluJo SINE Alu -68 244 1 27 49 0 0 chr10 16436542 16436583 -123880182 + AT_rich Low_complexity Low_complexity 1 41 0 304 279 27 99 chr10 16436686 16436822 -123879943 + L1ME LINE L1 5580 5695 -426 1713 147 42 3 chr10 16436822 16437107 -123879658 - AluJo SINE Alu -10 302 7 304 279 27 99 chr10 16437107 16437192 -123879573 + L1ME LINE L1 5695 5785 -336 395 211 13 92 chr10 16437628 16437719 -123879046 - L1MB8 LINE L1 -1 6177 6080 210 37 0 0 chr10 16437719 16437746 -123879019 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2181 90 18 0 chr10 16437746 16438024 -123878741 - AluSg SINE Alu -27 283 1 395 211 13 92 chr10 16438024 16438083 -123878682 - L1MB8 LINE L1 -96 6082 6038 2282 109 0 10 chr10 16438669 16438982 -123877783 - AluSx SINE Alu 0 312 3 2167 108 3 7 chr10 16441610 16441905 -123874860 - AluSx SINE Alu -18 294 1 468 231 186 13 chr10 16444123 16444279 -123872486 - MIR3 SINE MIR -1 207 25 1901 138 4 4 chr10 16444412 16444688 -123872077 + AluSx SINE Alu 1 276 -36 2046 135 0 16 chr10 16445299 16445603 -123871162 - AluSx SINE Alu -11 301 3 2200 139 44 13 chr10 16446136 16446523 -123870242 + L1MA4 LINE L1 5897 6295 -5 189 286 0 0 chr10 16446734 16446783 -123869982 - L3 LINE CR1 -3 1574 1526 2109 120 3 17 chr10 16447011 16447311 -123869454 + AluSx SINE Alu 1 296 -16 2123 111 0 66 chr10 16447909 16448241 -123868524 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr10 16449278 16449299 -123867466 + AT_rich Low_complexity Low_complexity 1 21 0 1094 139 0 0 chr10 16449302 16449453 -123867312 - FRAM SINE Alu -24 152 2 592 143 0 159 chr10 16449562 16449642 -123867123 - Charlie5 DNA MER1_type 0 2624 2589 2340 88 3 13 chr10 16449642 16449950 -123866815 + AluSx SINE Alu 1 305 -7 592 143 0 159 chr10 16449950 16450058 -123866707 - Charlie5 DNA MER1_type -35 2589 2466 497 154 138 0 chr10 16450098 16450221 -123866544 - Charlie5 DNA MER1_type -121 2491 2352 * 600 192 34 41 chr10 16450220 16450366 -123866399 - Charlie5 DNA MER1_type -2413 199 55 2212 111 3 0 chr10 16450460 16450757 -123866008 - AluSp SINE Alu -15 298 1 1988 116 3 66 chr10 16452188 16452507 -123864258 - AluJb SINE Alu -3 309 11 761 116 27 7 chr10 16453216 16453362 -123863403 + CT-rich Low_complexity Low_complexity 1 149 0 592 178 76 8 chr10 16453362 16453480 -123863285 - FRAM SINE Alu 0 40 1 295 274 173 34 chr10 16453564 16453743 -123863022 - MIR SINE MIR -12 250 47 312 257 85 55 chr10 16453798 16453966 -123862799 + MER5A DNA MER1_type 6 187 -2 395 281 183 0 chr10 16454090 16454243 -123862522 - MER5A DNA MER1_type 0 189 9 2300 97 13 0 chr10 16454547 16454845 -123861920 + AluSg SINE Alu 1 302 -8 21 57 0 0 chr10 16455446 16455481 -123861284 + AT_rich Low_complexity Low_complexity 1 35 0 387 208 0 0 chr10 16455592 16455712 -123861053 + (TCCA)n Simple_repeat Simple_repeat 3 122 0 2102 118 0 23 chr10 16455937 16456242 -123860523 + AluSq SINE Alu 1 298 -15 853 197 66 38 chr10 16456278 16456430 -123860335 - MER20 DNA MER1_type 0 219 58 2154 101 37 3 chr10 16456430 16456728 -123860037 + AluSg SINE Alu 1 308 -2 853 197 66 38 chr10 16456728 16456788 -123859977 - MER20 DNA MER1_type -161 58 1 1726 175 97 27 chr10 16456973 16457374 -123859391 - MER63B DNA MER1_type -7 429 1 2178 115 0 10 chr10 16458195 16458491 -123858274 - AluSx SINE Alu -19 293 1 181 275 0 0 chr10 16458550 16458590 -123858175 - MER5A DNA MER1_type -71 118 79 4252 127 70 58 chr10 16459068 16460472 -123856293 + pTR5 LTR ERV1 743 2606 0 1403 211 68 0 chr10 16462117 16462238 -123854527 + AluJo SINE Alu 1 112 -200 183 42 0 0 chr10 16462238 16462262 -123854503 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1403 211 68 0 chr10 16462262 16462420 -123854345 + AluJo SINE Alu 112 299 -13 2355 103 3 0 chr10 16462512 16462813 -123853952 + AluSx SINE Alu 1 302 -10 356 37 0 19 chr10 16462889 16462943 -123853822 + L1PA3 LINE L1 6103 6155 0 234 0 0 0 chr10 16463235 16463261 -123853504 + (T)n Simple_repeat Simple_repeat 1 26 0 2732 133 18 13 chr10 16463935 16464085 -123852680 - L1MA4 LINE L1 -2 6298 6150 2285 108 61 0 chr10 16464085 16464428 -123852337 + THE1B LTR MaLR 1 364 0 2732 133 18 13 chr10 16464428 16464730 -123852035 - L1MA4 LINE L1 -150 6150 5844 897 196 68 96 chr10 16465071 16465436 -123851329 + MER66A LTR ERV1 97 336 -142 510 169 0 0 chr10 16465555 16465632 -123851133 + MER66A LTR ERV1 402 478 0 756 234 62 0 chr10 16466533 16466725 -123850040 + MER3 DNA MER1_type 1 204 -5 618 249 22 27 chr10 16466982 16467167 -123849598 + MIR SINE MIR 63 246 -16 305 281 185 7 chr10 16467370 16467516 -123849249 - MIR3 SINE MIR -5 203 32 278 116 0 0 chr10 16467728 16467771 -123848994 + MLT1F LTR MaLR 339 381 -161 1471 203 57 91 chr10 16468010 16468294 -123848471 + MLT1C LTR MaLR 7 299 -168 1619 193 0 11 chr10 16468294 16468579 -123848186 + AluJo SINE Alu 1 282 -30 216 23 0 68 chr10 16468582 16468626 -123848139 + (CAAAA)n Simple_repeat Simple_repeat 1 41 0 1471 203 57 91 chr10 16468626 16468811 -123847954 + MLT1C LTR MaLR 301 464 -3 2098 210 92 8 chr10 16468936 16469436 -123847329 + MLT1F LTR MaLR 1 542 0 608 275 132 11 chr10 16469438 16469718 -123847047 + L2 LINE L2 2345 2658 -656 308 238 161 30 chr10 16469954 16470122 -123846643 - L1ME3A LINE L1 -219 5951 5762 741 259 111 58 chr10 16470263 16470676 -123846089 + L2 LINE L2 2879 3313 0 1032 211 28 0 chr10 16470736 16470949 -123845816 + MER20 DNA MER1_type 1 219 0 434 147 22 21 chr10 16470956 16471172 -123845593 + GA-rich Low_complexity Low_complexity 1 216 0 2110 140 0 7 chr10 16471571 16471878 -123844887 + AluSg SINE Alu 1 305 -5 23 92 0 0 chr10 16472305 16472370 -123844395 + AT_rich Low_complexity Low_complexity 1 65 0 1645 164 0 4 chr10 16472380 16472642 -123844123 - AluSx SINE Alu -19 293 33 2466 97 0 0 chr10 16473483 16473792 -123842973 - AluSq SINE Alu -4 309 1 2104 127 41 39 chr10 16474246 16474609 -123842156 + THE1B LTR MaLR 1 364 0 2257 90 0 7 chr10 16476415 16476715 -123840050 - AluY SINE Alu -9 302 5 2274 66 0 3 chr10 16476819 16477106 -123839659 - L1PA7 LINE L1 -3 6151 5866 1991 149 0 3 chr10 16477256 16477551 -123839214 + AluSx SINE Alu 1 294 -18 2322 122 0 0 chr10 16478356 16478668 -123838097 - AluSx SINE Alu 0 312 1 451 100 0 0 chr10 16479308 16479368 -123837397 + Alu SINE Alu 2 61 -257 755 129 0 0 chr10 16479725 16479841 -123836924 - L1MB3 LINE L1 -40 6143 6028 2100 114 28 3 chr10 16479946 16480236 -123836529 + AluSq SINE Alu 1 297 -16 303 28 0 0 chr10 16480946 16480982 -123835783 + (TTTC)n Simple_repeat Simple_repeat 2 37 0 626 173 140 39 chr10 16480983 16481162 -123835603 - MSTA LTR MaLR -51 377 181 2188 51 0 8 chr10 16481929 16482186 -123834579 - AluY SINE Alu -18 293 39 2324 91 7 10 chr10 16482246 16482555 -123834210 - AluSx SINE Alu -4 308 1 273 145 16 0 chr10 16482792 16482854 -123833911 - L1MA3 LINE L1 -1 6304 6242 1124 125 42 5 chr10 16482954 16483146 -123833619 - L1MA3 LINE L1 -91 6214 6016 2076 148 3 0 chr10 16483398 16483695 -123833070 + AluSx SINE Alu 1 298 -14 826 127 0 45 chr10 16483818 16483952 -123832813 - FLAM_C SINE Alu -5 128 1 361 351 39 39 chr10 16485763 16485959 -123830806 - L2 LINE L2 -1207 2107 1912 2550 83 0 3 chr10 16485959 16486298 -123830467 + L1PA10 LINE L1 5828 6165 -3 361 351 39 39 chr10 16486298 16486312 -123830453 - L2 LINE L2 -1402 1912 1899 1641 167 20 20 chr10 16486312 16486611 -123830154 + AluJo SINE Alu 14 312 0 361 351 39 39 chr10 16486611 16486684 -123830081 - L2 LINE L2 -1414 1900 1823 457 293 93 53 chr10 16486790 16487165 -123829600 + L1ME4a LINE L1 5661 6050 -71 1312 229 70 3 chr10 16487207 16487491 -123829274 - AluJo SINE Alu -9 303 1 405 58 0 0 chr10 16487511 16487563 -123829202 + (TA)n Simple_repeat Simple_repeat 1 52 0 282 293 111 43 chr10 16487755 16487963 -123828802 - L2 LINE L2 -1480 1834 1613 2058 135 24 34 chr10 16488085 16488464 -123828301 - THE1C LTR MaLR 0 375 1 2386 148 23 26 chr10 16489153 16489580 -123827185 + MSTB LTR MaLR 1 426 0 2067 114 7 16 chr10 16489934 16490240 -123826525 + AluSx SINE Alu 1 303 -9 240 35 0 0 chr10 16491660 16491689 -123825076 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1153 244 7 19 chr10 16491889 16492196 -123824569 - AluSq SINE Alu 0 303 1 1681 186 3 35 chr10 16492904 16493216 -123823549 - AluJo SINE Alu -10 302 1 597 138 0 21 chr10 16494586 16494680 -123822085 - FLAM_A SINE Alu -19 123 32 2503 80 0 6 chr10 16495319 16495633 -123821132 + AluSq SINE Alu 1 312 -1 181 111 67 0 chr10 16498870 16498915 -123817850 + A-rich Low_complexity Low_complexity 2 49 0 762 177 0 0 chr10 16498985 16499115 -123817650 - FLAM_C SINE Alu -3 130 1 2283 92 0 0 chr10 16499388 16499680 -123817085 - AluSc SINE Alu -15 294 3 27 29 0 0 chr10 16499684 16499718 -123817047 + AT_rich Low_complexity Low_complexity 1 34 0 1759 153 0 4 chr10 16500122 16500410 -123816355 + AluJb SINE Alu 23 309 0 351 44 0 0 chr10 16500934 16500979 -123815786 + (TG)n Simple_repeat Simple_repeat 1 45 0 22 0 0 0 chr10 16501398 16501420 -123815345 + AT_rich Low_complexity Low_complexity 1 22 0 241 267 0 0 chr10 16501642 16501702 -123815063 + MIR SINE MIR 90 149 -113 262 266 9 46 chr10 16502258 16502367 -123814398 - MIR3 SINE MIR 0 208 104 2804 160 63 21 chr10 16502942 16503516 -123813249 - L1MD1 LINE L1 0 6242 5645 22 0 0 0 chr10 16503977 16503999 -123812766 + AT_rich Low_complexity Low_complexity 1 22 0 1296 228 72 62 chr10 16504687 16505398 -123811367 + L1ME1 LINE L1 2804 3521 -2625 1759 252 22 7 chr10 16505410 16505950 -123810815 + L1ME1 LINE L1 3626 4173 -1973 1253 252 64 88 chr10 16505976 16506536 -123810229 + MER77 LTR ERV1 53 599 -6 379 227 62 23 chr10 16506621 16506749 -123810016 + L1ME1 LINE L1 4171 4303 -1843 2512 217 81 37 chr10 16506799 16506950 -123809815 + L1ME1 LINE L1 4787 4930 -1236 2029 161 0 0 chr10 16506950 16507260 -123809505 + AluJo SINE Alu 1 310 -2 2512 217 81 37 chr10 16507260 16508084 -123808681 + L1ME1 LINE L1 4930 5845 -321 3429 53 2 2 chr10 16508084 16508516 -123808249 + L1PA7 LINE L1 5719 6150 -4 2512 217 81 37 chr10 16508516 16508848 -123807917 + L1ME1 LINE L1 5845 6161 -5 2011 131 0 0 chr10 16509008 16509283 -123807482 + AluSx SINE Alu 1 275 -37 252 0 0 0 chr10 16509290 16509318 -123807447 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 843 284 72 40 chr10 16509319 16509764 -123807001 + L1ME3A LINE L1 5322 5792 -378 1893 105 63 14 chr10 16509764 16510050 -123806715 + AluSx SINE Alu 1 300 -12 843 284 72 40 chr10 16510050 16510202 -123806563 + L1ME3A LINE L1 5792 5938 -232 346 268 133 4 chr10 16510215 16510358 -123806407 + MIR SINE MIR 2 172 -36 2472 94 0 0 chr10 16511043 16511351 -123805414 - AluSq SINE Alu -4 309 2 1988 113 3 69 chr10 16511920 16512238 -123804527 - AluSx SINE Alu -15 297 1 1147 66 0 0 chr10 16512423 16512559 -123804206 - AluSc SINE Alu -173 136 1 2243 121 0 0 chr10 16515103 16515401 -123801364 - AluSx SINE Alu -14 298 1 405 0 0 0 chr10 16516744 16516789 -123799976 + (TTATA)n Simple_repeat Simple_repeat 5 49 0 258 32 0 0 chr10 16517932 16517963 -123798802 + (ATTG)n Simple_repeat Simple_repeat 4 34 0 1562 191 49 0 chr10 16517963 16518230 -123798535 - AluJb SINE Alu -32 280 1 608 311 31 13 chr10 16518668 16518896 -123797869 - MIR SINE MIR -25 237 6 211 336 91 0 chr10 16518997 16519107 -123797658 - MIR SINE MIR -7 255 136 2186 123 0 0 chr10 16519179 16519479 -123797286 - AluSg SINE Alu -10 300 1 185 317 98 0 chr10 16519748 16519830 -123796935 + L2 LINE L2 3208 3297 -16 2205 110 3 10 chr10 16519839 16520139 -123796626 + AluSg SINE Alu 1 298 -12 2018 103 53 0 chr10 16521123 16521405 -123795360 + AluSp SINE Alu 1 297 -16 579 290 85 0 chr10 16521600 16521776 -123794989 + MIR SINE MIR 21 211 -51 24 32 0 0 chr10 16523663 16523694 -123793071 + AT_rich Low_complexity Low_complexity 1 31 0 268 277 121 12 chr10 16523871 16523954 -123792811 + L2 LINE L2 3193 3284 -29 186 208 62 0 chr10 16524683 16524731 -123792034 - L2 LINE L2 -1 3312 3262 271 214 29 29 chr10 16524871 16524941 -123791824 - L2 LINE L2 -188 3084 3015 440 283 92 69 chr10 16524958 16524981 -123791784 + MIR SINE MIR 13 34 -228 2078 124 0 0 chr10 16524981 16525294 -123791471 + AluSx SINE Alu 4 316 0 440 283 92 69 chr10 16525294 16525442 -123791323 + MIR SINE MIR 34 189 -73 1109 38 0 0 chr10 16525458 16525590 -123791175 - L1PA5 LINE L1 -8 6146 6015 189 297 62 0 chr10 16525602 16525666 -123791099 + MIR SINE MIR 187 254 -8 483 300 111 12 chr10 16525891 16526144 -123790621 - L2 LINE L2 -471 2843 2566 2153 125 13 0 chr10 16526297 16526600 -123790165 + AluSx SINE Alu 1 307 -5 1193 174 43 0 chr10 16526697 16526932 -123789833 + L1MB3 LINE L1 5928 6172 -11 186 43 0 0 chr10 16526936 16526959 -123789806 + (ATG)n Simple_repeat Simple_repeat 2 24 0 1831 183 0 3 chr10 16527794 16528105 -123788660 + AluJo SINE Alu 1 310 -2 323 161 0 58 chr10 16528287 16528374 -123788391 - L1MA10 LINE L1 0 6334 6253 507 233 0 45 chr10 16529881 16530014 -123786751 + MER63 DNA MER1_type 1 753 -83 267 277 24 0 chr10 16530013 16530096 -123786669 + MER63 DNA MER1_type 976 1060 0 * 273 29 0 0 chr10 16533742 16533776 -123782989 + (CA)n Simple_repeat Simple_repeat 2 35 0 186 301 14 68 chr10 16533951 16534097 -123782668 - L2 LINE L2 -299 2973 2836 2415 49 42 0 chr10 16536831 16537118 -123779647 - AluY SINE Alu -12 299 1 2148 117 0 0 chr10 16538218 16538545 -123778220 + AluSx SINE Alu 1 327 0 528 208 164 25 chr10 16538829 16538988 -123777777 + MER5A DNA MER1_type 9 189 0 703 241 24 18 chr10 16539678 16539848 -123776917 + MER5B DNA MER1_type 2 172 -6 267 301 44 18 chr10 16540183 16540296 -123776469 - LTR16B LTR ERVL -1 463 348 721 297 59 4 chr10 16540338 16540577 -123776188 - LTR16B LTR ERVL -212 252 1 2055 149 0 0 chr10 16540851 16541153 -123775612 - AluSx SINE Alu -10 302 1 392 325 15 35 chr10 16541184 16541384 -123775381 - MIR SINE MIR -18 244 49 312 284 84 32 chr10 16542460 16542650 -123774115 - MIR SINE MIR -2 260 61 2162 111 7 3 chr10 16542739 16543037 -123773728 - AluY SINE Alu -11 300 2 2420 179 26 7 chr10 16543154 16543584 -123773181 + L1PA16 LINE L1 5729 6166 0 3490 88 20 0 chr10 16543823 16544267 -123772498 + MLT2A2 LTR ERVL 1 453 0 847 314 62 0 chr10 16544310 16544616 -123772149 + LTR16C LTR ERVL 167 491 0 234 0 0 0 chr10 16545649 16545675 -123771090 + (CA)n Simple_repeat Simple_repeat 2 27 0 906 188 12 6 chr10 16547052 16547212 -123769553 + FRAM SINE Alu 1 153 -23 2077 126 3 0 chr10 16547216 16547532 -123769233 + AluSx SINE Alu 1 312 0 309 26 0 0 chr10 16547914 16547952 -123768813 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 639 308 100 11 chr10 16548105 16548466 -123768299 + L1ME LINE L1 5282 5682 -439 615 247 132 6 chr10 16548484 16548658 -123768107 - MIR SINE MIR -44 218 23 1950 145 0 0 chr10 16548744 16549060 -123767705 + AluSx SINE Alu 1 316 0 1331 264 116 0 chr10 16549060 16549491 -123767274 - L1ME1 LINE L1 -13 6153 5673 194 263 88 105 chr10 16549612 16549726 -123767039 + MIR SINE MIR 38 149 -59 2007 133 17 91 chr10 16550985 16551103 -123765662 + MLT1B LTR MaLR 1 126 -264 2991 157 91 59 chr10 16551103 16551561 -123765204 + LTR9 LTR ERV1 1 443 -169 212 0 0 35 chr10 16551561 16551590 -123765175 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 1867 113 53 0 chr10 16551593 16551859 -123764906 - AluSg SINE Alu -30 280 1 2991 157 91 59 chr10 16551859 16551989 -123764776 + LTR9 LTR ERV1 444 612 0 2007 133 17 91 chr10 16551989 16552276 -123764489 + MLT1B LTR MaLR 126 376 -14 207 336 8 34 chr10 16552354 16552473 -123764292 - L2 LINE L2 -6 3307 3192 4207 109 20 45 chr10 16553091 16553665 -123763100 + MER41B LTR ERV1 1 559 -76 2520 65 3 0 chr10 16553665 16553972 -123762793 - AluY SINE Alu -3 308 1 4207 109 20 45 chr10 16553972 16554048 -123762717 + MER41B LTR ERV1 559 635 0 640 129 35 26 chr10 16554096 16554212 -123762553 + L1MA4A LINE L1 6184 6300 -3 1297 149 104 143 chr10 16554474 16554985 -123761780 + MER4A LTR ERV1 1 344 -121 1992 147 20 3 chr10 16554985 16555291 -123761474 + AluSx SINE Alu 1 311 -1 1297 149 104 143 chr10 16555291 16555389 -123761376 + MER4A LTR ERV1 344 444 -21 188 88 59 0 chr10 16555655 16555689 -123761076 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 328 333 85 41 chr10 16555690 16555936 -123760829 - L2 LINE L2 -2 3270 3014 1708 82 0 0 chr10 16556179 16556411 -123760354 - L1PA7 LINE L1 -686 5486 5255 5702 56 0 0 chr10 16556411 16557069 -123759696 + L1PA7 LINE L1 5496 6154 0 263 139 0 0 chr10 16557087 16557123 -123759642 + tRNA-Arg-AGA tRNA tRNA 1 36 -40 659 200 0 8 chr10 16558003 16558123 -123758642 - MER63 DNA MER1_type -317 745 1 1876 147 48 7 chr10 16558768 16559060 -123757705 - AluSx SINE Alu -8 304 1 232 336 150 11 chr10 16559341 16559615 -123757150 + L2 LINE L2 2904 3215 -98 425 327 9 51 chr10 16559649 16559863 -123756902 - MIR SINE MIR -4 258 54 472 267 38 0 chr10 16559875 16559980 -123756785 + L2 LINE L2 3205 3313 0 821 194 114 27 chr10 16560034 16560297 -123756468 + L1MD3 LINE L1 7695 7980 -15 2388 110 0 0 chr10 16560336 16560645 -123756120 - AluSc SINE Alu 0 309 1 422 314 89 31 chr10 16560729 16560920 -123755845 - MIR3 SINE MIR 0 208 7 351 0 0 0 chr10 16561259 16561298 -123755467 + (CA)n Simple_repeat Simple_repeat 2 40 0 23 33 0 0 chr10 16562099 16562129 -123754636 + AT_rich Low_complexity Low_complexity 1 30 0 2079 126 0 0 chr10 16562203 16562489 -123754276 + AluSx SINE Alu 1 286 -26 271 263 120 45 chr10 16562681 16562814 -123753951 - MIR SINE MIR -83 179 37 1431 187 74 11 chr10 16562845 16563129 -123753636 - AluJb SINE Alu -6 306 5 1975 137 0 17 chr10 16564187 16564486 -123752279 + AluJo SINE Alu 3 296 -16 226 331 32 16 chr10 16564726 16564850 -123751915 + MER5A DNA MER1_type 60 185 -4 681 252 6 6 chr10 16565050 16565209 -123751556 - MER5B DNA MER1_type -19 159 1 2537 163 26 9 chr10 16565294 16565747 -123751018 - LTR32 LTR ERVL 0 471 11 1079 129 0 0 chr10 16566404 16566559 -123750206 - AluSg/x SINE Alu -22 288 134 2211 118 0 0 chr10 16567196 16567492 -123749273 + AluSc SINE Alu 9 304 -5 1943 122 7 7 chr10 16568634 16568912 -123747853 - AluSx SINE Alu -24 288 11 1543 200 0 10 chr10 16569621 16569774 -123746991 - AluJo SINE Alu -25 287 137 531 0 0 0 chr10 16569774 16569833 -123746932 + (TA)n Simple_repeat Simple_repeat 1 59 0 1543 200 0 10 chr10 16569833 16569969 -123746796 - AluJo SINE Alu -175 137 1 187 152 0 0 chr10 16570115 16570148 -123746617 - L2 LINE L2 -1 3312 3280 2348 69 23 23 chr10 16570152 16570458 -123746307 + AluY SINE Alu 1 306 -5 2941 3 0 0 chr10 16572790 16573102 -123743663 - AluYb8 SINE Alu -6 312 1 312 313 54 31 chr10 16573275 16573499 -123743266 + HAL1 LINE L1 2265 2493 -14 39 118 0 0 chr10 16573703 16573924 -123742841 + AT_rich Low_complexity Low_complexity 1 221 0 3412 167 49 14 chr10 16574654 16574689 -123742076 + L1MC2 LINE L1 5291 5323 -1021 2036 102 49 3 chr10 16574689 16574974 -123741791 + AluSg SINE Alu 1 298 -12 3412 167 49 14 chr10 16574974 16575592 -123741173 + L1MC2 LINE L1 5323 5967 -377 1524 182 19 36 chr10 16575641 16576029 -123740736 + MSTC LTR MaLR 1 428 0 228 281 90 94 chr10 16578412 16578679 -123738086 + L2 LINE L2 2853 3118 -195 2615 170 50 55 chr10 16578679 16579165 -123737600 - L1MC1 LINE L1 -6 6327 5843 2393 93 0 3 chr10 16579165 16579476 -123737289 - AluSx SINE Alu -2 310 1 2615 170 50 55 chr10 16579476 16579588 -123737177 - L1MC1 LINE L1 -490 5843 5732 375 281 146 49 chr10 16579597 16579782 -123736983 + L2 LINE L2 3111 3313 0 298 312 64 9 chr10 16579978 16580087 -123736678 + L2 LINE L2 3156 3270 -2 438 274 175 34 chr10 16580860 16581123 -123735642 - L3 LINE CR1 -7 1570 1271 1632 175 14 11 chr10 16581144 16581429 -123735336 + AluJb SINE Alu 1 286 -26 230 319 76 80 chr10 16581594 16581696 -123735069 - L3 LINE CR1 -612 965 864 2151 113 3 0 chr10 16581696 16582003 -123734762 - AluSx SINE Alu 0 308 1 230 319 76 80 chr10 16582003 16582187 -123734578 - L3 LINE CR1 -713 864 679 308 250 20 30 chr10 16582189 16582289 -123734476 + L2 LINE L2 3187 3285 -28 358 284 52 39 chr10 16582605 16582760 -123734005 - L3 LINE CR1 -990 587 431 827 114 0 30 chr10 16582851 16582982 -123733783 - FLAM_C SINE Alu -5 138 12 438 358 66 18 chr10 16583399 16583625 -123733140 - MIR SINE MIR -6 256 20 913 293 93 37 chr10 16583762 16584267 -123732498 + L2 LINE L2 2794 3313 0 1514 216 89 39 chr10 16584932 16585371 -123731394 + MLT1C LTR MaLR 5 465 -2 30 27 0 0 chr10 16585371 16585408 -123731357 + AT_rich Low_complexity Low_complexity 1 37 0 960 233 6 0 chr10 16585527 16585703 -123731062 + MER45A DNA AcHobo 2 178 0 1305 163 163 43 chr10 16585848 16586174 -123730591 + MER47A DNA MER2_type 1 365 -1 192 40 0 0 chr10 16586300 16586325 -123730440 + (CA)n Simple_repeat Simple_repeat 1 25 0 1628 144 57 133 chr10 16586383 16586750 -123730015 + Charlie3 DNA MER1_type 1 2712 0 2043 151 0 10 chr10 16587667 16587979 -123728786 - AluJo SINE Alu -3 309 1 242 307 27 0 chr10 16588264 16588339 -123728426 - Charlie4 DNA MER1_type 0 1961 1885 21 36 0 0 chr10 16588633 16588661 -123728104 + AT_rich Low_complexity Low_complexity 1 28 0 1656 162 20 30 chr10 16588916 16589212 -123727553 - AluJb SINE Alu -19 293 1 833 245 38 60 chr10 16589364 16589629 -123727136 - MIR SINE MIR -2 260 2 40203 34 2 0 chr10 16589859 16595381 -123721384 - L1PA4 LINE L1 -3 6152 623 792 33 0 0 chr10 16595381 16595471 -123721294 - L1PA4 LINE L1 -6050 96 7 402 291 89 17 chr10 16595627 16595806 -123720959 - MIR SINE MIR -40 222 31 245 284 21 121 chr10 16595972 16596162 -123720603 + L2 LINE L2 2651 2821 -493 180 0 0 0 chr10 16597220 16597240 -123719525 + (A)n Simple_repeat Simple_repeat 1 20 0 243 0 0 0 chr10 16598406 16598433 -123718332 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1940 143 0 3 chr10 16598436 16598723 -123718042 - AluSg SINE Alu -24 286 1 390 344 19 19 chr10 16598737 16598894 -123717871 - MIR3 SINE MIR -10 198 42 1966 126 10 40 chr10 16599990 16600292 -123716473 + AluSg SINE Alu 1 293 -17 581 299 69 92 chr10 16600428 16601093 -123715672 + L2 LINE L2 2155 2804 -510 232 333 0 0 chr10 16601106 16601175 -123715590 + L2 LINE L2 2733 2801 -513 22 70 0 0 chr10 16601342 16601385 -123715380 + AT_rich Low_complexity Low_complexity 1 43 0 438 315 127 0 chr10 16601617 16601782 -123714983 - MER91A DNA MER1_type -8 188 3 356 282 57 8 chr10 16601896 16602020 -123714745 + L2 LINE L2 3184 3313 0 2201 123 7 0 chr10 16602069 16602371 -123714394 + AluSq SINE Alu 1 304 -9 2317 130 35 0 chr10 16602398 16602774 -123713991 + L1MA5 LINE L1 5912 6300 0 22 0 0 0 chr10 16603669 16603691 -123713074 + AT_rich Low_complexity Low_complexity 1 22 0 2117 122 3 3 chr10 16604643 16604946 -123711819 + AluSc SINE Alu 1 303 -6 1195 36 0 0 chr10 16605557 16605697 -123711068 - AluY SINE Alu -1 310 171 370 287 63 71 chr10 16607404 16607658 -123709107 + L2 LINE L2 3014 3265 -48 1968 129 17 13 chr10 16607913 16608215 -123708550 + AluJb SINE Alu 1 303 -9 549 110 0 0 chr10 16608603 16608685 -123708080 + (TCCA)n Simple_repeat Simple_repeat 4 85 0 1765 172 0 23 chr10 16609712 16610014 -123706751 - AluJb SINE Alu -17 295 1 3987 165 38 18 chr10 16613451 16613513 -123703252 + L1 LINE L1 3556 3615 -2531 1794 159 6 56 chr10 16613513 16613833 -123702932 + AluJb SINE Alu 1 304 -8 3987 165 38 18 chr10 16613833 16614532 -123702233 + L1 LINE L1 3615 4332 -1814 3615 286 147 13 chr10 16614551 16616210 -123700555 + L1M2a LINE L1 6 1886 -5282 * 4948 147 59 35 chr10 16616205 16617287 -123699478 + L1MA7 LINE L1 5156 6263 -28 1852 157 18 3 chr10 16617287 16617573 -123699192 - AluJo SINE Alu -22 290 1 4948 147 59 35 chr10 16617573 16617603 -123699162 + L1MA7 LINE L1 6263 6291 0 1859 171 4 0 chr10 16618126 16618441 -123698324 + AluSx SINE Alu 1 316 0 257 277 60 12 chr10 16618997 16619080 -123697685 + MIR SINE MIR 68 154 -108 191 79 53 40 chr10 16619418 16619494 -123697271 + (TA)n Simple_repeat Simple_repeat 1 77 0 2108 118 3 22 chr10 16619684 16619998 -123696767 - AluSx SINE Alu -4 308 1 2361 60 0 0 chr10 16620008 16620439 -123696326 - AluY SINE Alu 0 431 1 2057 134 0 0 chr10 16620568 16620851 -123695914 + AluSx SINE Alu 1 283 -29 306 301 55 41 chr10 16620876 16621022 -123695743 - L1ME LINE L1 -518 5646 5499 1076 220 123 82 chr10 16621040 16621229 -123695536 - L1MC5 LINE L1 -38 7923 7743 1828 174 10 3 chr10 16621229 16621527 -123695238 - AluJb SINE Alu -11 301 2 1076 220 123 82 chr10 16621527 16621815 -123694950 - L1MC5 LINE L1 -218 7743 7413 3661 115 11 46 chr10 16621815 16622191 -123694574 + MER1A DNA MER1_type 1 354 -2346 1922 75 4 0 chr10 16622191 16622431 -123694334 + AluSx SINE Alu 60 300 -12 3661 115 11 46 chr10 16622431 16622600 -123694165 + MER1A DNA MER1_type 354 527 0 1076 220 123 82 chr10 16622600 16622722 -123694043 - L1MC5 LINE L1 -548 7413 7298 970 139 20 0 chr10 16623787 16623938 -123692827 - FRAM SINE Alu -23 153 1 496 222 23 6 chr10 16624484 16624660 -123692105 + CT-rich Low_complexity Low_complexity 2 180 0 278 193 18 18 chr10 16624688 16624802 -123691963 + CT-rich Low_complexity Low_complexity 2 115 0 369 0 0 0 chr10 16624802 16624843 -123691922 + (CA)n Simple_repeat Simple_repeat 1 41 0 246 307 54 78 chr10 16625078 16625244 -123691521 + L2 LINE L2 3081 3242 -30 32 35 0 18 chr10 16625462 16625483 -123691282 + AT_rich Low_complexity Low_complexity 1 21 -35 1863 182 0 3 chr10 16625483 16625791 -123690974 + AluJo SINE Alu 1 307 -5 32 35 0 18 chr10 16625791 16625826 -123690939 + AT_rich Low_complexity Low_complexity 21 56 0 2197 91 44 3 chr10 16626113 16626382 -123690383 + AluSg SINE Alu 1 285 -25 279 0 0 0 chr10 16626382 16626413 -123690352 + (CA)n Simple_repeat Simple_repeat 2 32 0 2197 91 44 3 chr10 16626413 16626441 -123690324 + AluSg SINE Alu 285 310 0 1878 127 53 7 chr10 16626555 16626839 -123689926 + AluSx SINE Alu 1 297 -15 238 163 62 0 chr10 16627998 16628078 -123688687 + (TA)n Simple_repeat Simple_repeat 1 85 0 2177 110 3 0 chr10 16628218 16628509 -123688256 + AluSc SINE Alu 1 292 -17 22 0 0 0 chr10 16628509 16628531 -123688234 + AT_rich Low_complexity Low_complexity 1 22 0 1420 152 16 20 chr10 16628543 16628787 -123687978 + AluJo SINE Alu 45 287 -25 838 161 0 15 chr10 16628892 16629029 -123687736 + AluJo SINE Alu 1 135 -177 1510 189 21 11 chr10 16629029 16629309 -123687456 + AluJo SINE Alu 1 283 -29 226 298 0 0 chr10 16630106 16630163 -123686602 + GA-rich Low_complexity Low_complexity 99 155 0 620 247 96 90 chr10 16630250 16630489 -123686276 - L2 LINE L2 0 3313 3070 225 65 0 0 chr10 16630489 16630520 -123686245 + (TG)n Simple_repeat Simple_repeat 1 31 0 620 247 96 90 chr10 16630520 16630612 -123686153 - L2 LINE L2 -243 3070 2980 517 311 44 19 chr10 16630925 16631131 -123685634 + MIR SINE MIR 52 262 0 929 227 43 11 chr10 16631570 16631852 -123684913 + L1MA4 LINE L1 6009 6299 -1 219 277 64 92 chr10 16631894 16632005 -123684760 + L2 LINE L2 2687 2800 -472 1913 160 3 0 chr10 16632005 16632311 -123684454 + AluJb SINE Alu 1 307 -5 219 277 64 92 chr10 16632311 16632600 -123684165 + L2 LINE L2 2800 3067 -205 26 0 0 0 chr10 16632732 16632758 -123684007 + AT_rich Low_complexity Low_complexity 1 26 0 2141 109 3 0 chr10 16632759 16633042 -123683723 - AluSx SINE Alu -24 288 5 3648 149 20 30 chr10 16633061 16633518 -123683247 - L1PB4 LINE L1 -12 6144 5693 2016 110 62 7 chr10 16633518 16633808 -123682957 - AluSq SINE Alu -7 306 1 3648 149 20 30 chr10 16633808 16633992 -123682773 - L1PB4 LINE L1 -463 5693 5509 376 302 47 31 chr10 16634411 16634603 -123682162 + MIR SINE MIR 40 234 -28 274 217 14 14 chr10 16634622 16634691 -123682074 + (TAG)n Simple_repeat Simple_repeat 3 71 0 21 0 0 0 chr10 16635044 16635065 -123681700 + GC_rich Low_complexity Low_complexity 1 21 0 2146 119 10 3 chr10 16635654 16636034 -123680731 - AluSp SINE Alu 0 382 1 2497 74 0 0 chr10 16636045 16636356 -123680409 - AluY SINE Alu 0 311 1 25 65 0 0 chr10 16636808 16636854 -123679911 + AT_rich Low_complexity Low_complexity 1 46 0 1720 145 69 28 chr10 16637241 16637531 -123679234 + AluSx SINE Alu 4 305 -7 1060 180 0 0 chr10 16637547 16637719 -123679046 - FRAM SINE Alu -10 166 1 922 260 66 17 chr10 16637732 16638020 -123678745 + MLT1J LTR MaLR 210 511 0 3348 143 10 56 chr10 16638682 16639310 -123677455 - LTR9 LTR ERV1 0 612 14 222 62 0 0 chr10 16639311 16639343 -123677422 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 2127 69 0 79 chr10 16639343 16639646 -123677119 - AluY SINE Alu -32 279 1 443 251 169 6 chr10 16639673 16639856 -123676909 - MIR SINE MIR -48 214 2 798 211 13 6 chr10 16640284 16640440 -123676325 + FRAM SINE Alu 2 158 -18 1868 152 0 26 chr10 16640459 16640762 -123676003 + AluJo SINE Alu 1 295 -17 382 246 94 22 chr10 16640819 16640957 -123675808 - MARNA DNA Mariner -236 350 203 468 281 146 35 chr10 16642601 16642861 -123673904 + MLT1L LTR MaLR 3 291 -324 1229 170 0 28 chr10 16642872 16643084 -123673681 + AluJo SINE Alu 86 291 -21 783 208 0 0 chr10 16644817 16644947 -123671818 - FLAM_A SINE Alu 0 133 4 4805 152 66 24 chr10 16645276 16646143 -123670622 + MER4D LTR ERV1 1 903 0 2401 86 13 0 chr10 16646753 16647057 -123669708 - AluSc SINE Alu -1 308 1 261 232 0 37 chr10 16647473 16647555 -123669210 + GA-rich Low_complexity Low_complexity 1 79 0 2074 247 46 26 chr10 16647557 16648127 -123668638 + MLT1G LTR MaLR 1 581 -9 24 53 0 0 chr10 16648346 16648384 -123668381 + AT_rich Low_complexity Low_complexity 1 38 0 276 308 0 0 chr10 16648619 16648684 -123668081 - L2 LINE L2 -20 3252 3188 1050 235 18 43 chr10 16648939 16649216 -123667549 + MLT1A2 LTR MaLR 6 275 -99 200 306 63 54 chr10 16649221 16649332 -123667433 + L2 LINE L2 3156 3267 -5 24 53 0 0 chr10 16649415 16649453 -123667312 + AT_rich Low_complexity Low_complexity 1 38 0 464 233 25 74 chr10 16649460 16649623 -123667142 - HAL1 LINE L1 -1 2506 2352 501 322 153 8 chr10 16650303 16650558 -123666207 + L3 LINE CR1 208 499 -1078 1995 128 0 3 chr10 16650677 16650992 -123665773 + AluSx SINE Alu 1 314 0 210 380 20 10 chr10 16651046 16651146 -123665619 + L3 LINE CR1 1440 1540 -37 1716 150 73 4 chr10 16651172 16651446 -123665319 - AluJo SINE Alu -19 293 1 23 0 0 0 chr10 16653058 16653081 -123663684 + AT_rich Low_complexity Low_complexity 1 23 0 1932 257 19 38 chr10 16653255 16653974 -123662791 - L1M4 LINE L1 -4831 1711 1067 2093 127 0 7 chr10 16654223 16654554 -123662211 + AluSx SINE Alu 1 312 0 1176 268 90 29 chr10 16655177 16655304 -123661461 + L2 LINE L2 2807 2925 -388 2456 189 15 109 chr10 16655304 16655850 -123660915 + MLT2B3 LTR ERVL 1 484 -70 1777 174 26 7 chr10 16655850 16656177 -123660588 + AluJb SINE Alu 1 312 0 2456 189 15 109 chr10 16656177 16656242 -123660523 + MLT2B3 LTR ERVL 484 554 0 1176 268 90 29 chr10 16656242 16656592 -123660173 + L2 LINE L2 2925 3313 0 1837 148 52 86 chr10 16657264 16657648 -123659117 - THE1C LTR MaLR -4 371 1 23 0 0 0 chr10 16658232 16658255 -123658510 + AT_rich Low_complexity Low_complexity 1 23 0 956 172 0 24 chr10 16658298 16658467 -123658298 + FRAM SINE Alu 1 159 -17 2161 94 0 4 chr10 16660156 16660454 -123656311 - AluSc SINE Alu 0 305 9 2046 109 0 0 chr10 16661755 16662030 -123654735 - AluSx SINE Alu -3 309 35 618 328 69 40 chr10 16664112 16664563 -123652202 - LTR16B LTR ERVL 0 464 1 251 321 36 12 chr10 16664607 16664691 -123652074 - MIR3 SINE MIR -25 183 98 248 245 112 49 chr10 16664841 16664984 -123651781 - L1ME4a LINE L1 -5 6116 5965 227 217 33 0 chr10 16665032 16665092 -123651673 - L1M3 LINE L1 -294 5889 5828 182 282 77 39 chr10 16665557 16665635 -123651130 + MIR SINE MIR 13 93 -169 2401 77 7 0 chr10 16665687 16665997 -123650768 + L1MA3 LINE L1 5638 5949 -356 22 70 0 0 chr10 16666000 16666043 -123650722 + AT_rich Low_complexity Low_complexity 1 43 0 22 35 0 0 chr10 16666191 16666220 -123650545 + AT_rich Low_complexity Low_complexity 1 29 0 2398 90 10 3 chr10 16667145 16667455 -123649310 + AluSq SINE Alu 1 312 -1 354 45 0 0 chr10 16667977 16668021 -123648744 + (TG)n Simple_repeat Simple_repeat 1 44 0 254 236 32 122 chr10 16669884 16670007 -123646758 - L2 LINE L2 -5 3308 3197 261 308 77 26 chr10 16670156 16670273 -123646492 + L2 LINE L2 3145 3267 -5 2531 52 0 10 chr10 16670679 16670985 -123645780 - AluY SINE Alu -8 303 1 346 43 0 0 chr10 16671037 16671083 -123645682 - MADE1 DNA Mariner -34 46 1 261 242 121 25 chr10 16671691 16671848 -123644917 + L1MC4 LINE L1 7698 7869 -173 1443 160 4 4 chr10 16671910 16672135 -123644630 + AluJo SINE Alu 1 225 -87 227 316 32 11 chr10 16672389 16672484 -123644281 - L3b LINE CR1 -132 1451 1355 2157 97 0 57 chr10 16672725 16673056 -123643709 - AluSx SINE Alu 0 312 1 237 188 31 62 chr10 16673093 16673157 -123643608 + L2 LINE L2 3168 3229 -84 293 100 20 0 chr10 16673766 16673816 -123642949 + (CA)n Simple_repeat Simple_repeat 2 52 0 2439 88 0 0 chr10 16674869 16675177 -123641588 - AluY SINE Alu -3 308 1 1926 147 0 38 chr10 16675649 16675969 -123640796 - AluSq SINE Alu -5 308 1 413 296 33 0 chr10 16676109 16676261 -123640504 + MER103 DNA DNA 2 158 -8 2059 117 47 7 chr10 16677342 16677642 -123639123 + AluSx SINE Alu 1 312 0 2151 130 3 0 chr10 16677957 16678265 -123638500 - AluSg SINE Alu -1 309 1 287 288 58 50 chr10 16678447 16678586 -123638179 + MIR SINE MIR 24 163 -99 2295 87 17 0 chr10 16678604 16678904 -123637861 - AluSx SINE Alu -7 305 1 844 259 93 19 chr10 16679205 16679529 -123637236 - L1MC/D LINE L1 -2147 5661 5314 420 20 0 0 chr10 16679791 16679840 -123636925 + (ATG)n Simple_repeat Simple_repeat 1 49 0 1313 201 0 35 chr10 16679851 16680110 -123636655 - AluJo SINE Alu -25 287 38 231 306 57 16 chr10 16680123 16680247 -123636518 - L1MC/D LINE L1 -1131 5015 4887 1333 105 6 0 chr10 16680341 16680522 -123636243 - AluSg/x SINE Alu 0 310 129 252 175 63 28 chr10 16680649 16680792 -123635973 + (TA)n Simple_repeat Simple_repeat 2 149 0 195 42 0 0 chr10 16680856 16680880 -123635885 + (TA)n Simple_repeat Simple_repeat 2 25 0 254 253 0 40 chr10 16682183 16682258 -123634507 + LTR33A LTR ERVL 450 521 -2 969 164 84 148 chr10 16682895 16683193 -123633572 + AluJb SINE Alu 8 286 -26 189 0 0 0 chr10 16683224 16683245 -123633520 + (CA)n Simple_repeat Simple_repeat 2 22 0 1253 231 55 22 chr10 16683706 16684018 -123632747 - MER58B DNA MER1_type -14 327 6 7162 72 15 12 chr10 16684091 16685165 -123631600 - L1PB1 LINE L1 -1 6150 5078 2042 147 7 0 chr10 16685181 16685488 -123631277 + AluSx SINE Alu 1 309 -3 230 222 11 0 chr10 16685568 16685658 -123631107 + (TAGA)n Simple_repeat Simple_repeat 4 94 0 806 258 99 54 chr10 16685660 16686214 -123630551 - L1ME2 LINE L1 -323 5841 5263 405 276 109 21 chr10 16686468 16686660 -123630105 + L2 LINE L2 2806 3014 -299 1114 207 0 0 chr10 16686719 16686946 -123629819 + L1P LINE L1 5116 5342 -804 184 229 153 59 chr10 16686947 16687065 -123629700 + L2 LINE L2 3021 3149 -164 215 278 188 30 chr10 16687119 16687252 -123629513 + L2 LINE L2 3158 3311 -2 2312 104 0 0 chr10 16688471 16688768 -123627997 - AluSq SINE Alu -16 297 1 219 240 0 0 chr10 16689924 16689974 -123626791 + (CA)n Simple_repeat Simple_repeat 2 51 0 643 324 44 7 chr10 16690209 16690484 -123626281 + L2 LINE L2 2411 2695 -619 273 278 97 0 chr10 16690506 16690578 -123626187 - AluJo SINE Alu -143 159 81 1824 307 153 40 chr10 16691387 16692650 -123624115 + L2 LINE L2 1255 2739 -574 1483 184 26 8 chr10 16692650 16692917 -123623848 - AluJo SINE Alu -40 272 1 1824 307 153 40 chr10 16692917 16693279 -123623486 + L2 LINE L2 2739 3059 -254 1682 206 51 74 chr10 16693279 16693718 -123623047 + MLT1D LTR MaLR 1 428 -77 2220 131 0 0 chr10 16693718 16694030 -123622735 + AluSx SINE Alu 1 312 0 1682 206 51 74 chr10 16694030 16694104 -123622661 + MLT1D LTR MaLR 428 502 -3 339 44 0 0 chr10 16694130 16694175 -123622590 + (CA)n Simple_repeat Simple_repeat 1 45 0 435 315 69 23 chr10 16694919 16695179 -123621586 + MLT1I LTR MaLR 111 382 -27 265 304 34 34 chr10 16696402 16696550 -123620215 - L1ME4a LINE L1 -213 5908 5761 567 235 36 73 chr10 16697678 16697905 -123618860 - L1ME1 LINE L1 -19 6147 5967 23 0 0 0 chr10 16698355 16698378 -123618387 + AT_rich Low_complexity Low_complexity 1 23 0 2060 136 0 57 chr10 16698477 16698808 -123617957 + AluSx SINE Alu 1 312 0 294 87 0 0 chr10 16700033 16700079 -123616686 + (TTTTTA)n Simple_repeat Simple_repeat 2 47 0 321 296 184 15 chr10 16701624 16701838 -123614927 + MIR3 SINE MIR 1 250 -12 2206 100 31 0 chr10 16702848 16703139 -123613626 - AluSq SINE Alu -13 300 1 264 170 0 0 chr10 16706632 16706685 -123610080 + (TG)n Simple_repeat Simple_repeat 1 53 0 1281 163 23 19 chr10 16706718 16706982 -123609783 - AluJo SINE Alu 0 312 48 192 77 0 0 chr10 16707025 16707051 -123609714 + (TTC)n Simple_repeat Simple_repeat 2 27 0 819 148 7 22 chr10 16707053 16707188 -123609577 - FLAM_C SINE Alu 0 133 1 1781 99 3 114 chr10 16708020 16708344 -123608421 + AluSg SINE Alu 1 288 -22 2067 142 0 3 chr10 16709232 16709534 -123607231 + AluSx SINE Alu 1 301 -11 201 300 29 0 chr10 16709661 16709731 -123607034 - MIR SINE MIR -123 139 68 26 0 0 0 chr10 16712201 16712227 -123604538 + AT_rich Low_complexity Low_complexity 1 26 0 594 174 7 13 chr10 16712325 16712480 -123604285 + GA-rich Low_complexity Low_complexity 4 157 0 470 245 61 94 chr10 16712643 16712888 -123603877 - L2 LINE L2 -1 3312 3076 2442 97 44 36 chr10 16713116 16713477 -123603288 + THE1B LTR MaLR 1 364 0 514 294 28 0 chr10 16714319 16714462 -123602303 + MIR SINE MIR 2 148 -114 1683 183 34 29 chr10 16714482 16714832 -123601933 + MER46B DNA MER2_type 10 236 0 1692 160 63 45 chr10 16715132 16715464 -123601301 + MER44D DNA MER2_type 2 609 0 1497 272 51 23 chr10 16715763 16716024 -123600741 - L1ME3A LINE L1 -15 6155 5903 2114 121 0 29 chr10 16716024 16716339 -123600426 - AluSg1 SINE Alu -3 306 1 1497 272 51 23 chr10 16716339 16716352 -123600413 - L1ME3A LINE L1 -267 5903 5567 470 283 39 63 chr10 16716352 16716638 -123600127 - L1MA6 LINE L1 -431 5869 5591 * 1276 290 132 28 chr10 16716616 16717386 -123599379 - L1MEd LINE L1 -3879 2250 1561 207 0 0 0 chr10 16717386 16717409 -123599356 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1276 290 132 28 chr10 16717409 16717937 -123598828 - L1MEd LINE L1 -4568 1561 817 1216 203 17 17 chr10 16718764 16719000 -123597765 - MER46A DNA MER2_type 0 236 1 195 407 0 0 chr10 16719234 16719320 -123597445 - MIR SINE MIR -114 148 63 1766 167 0 35 chr10 16719442 16719754 -123597011 + AluJo SINE Alu 1 301 -11 4718 188 61 39 chr10 16719763 16720853 -123595912 + L1MC3 LINE L1 6663 7775 -10 2020 96 4 0 chr10 16720897 16721157 -123595608 - AluSp SINE Alu -14 299 39 198 0 0 0 chr10 16721235 16721257 -123595508 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 1885 188 0 0 chr10 16721280 16721584 -123595181 - AluJo SINE Alu -8 304 1 210 118 0 0 chr10 16721990 16722024 -123594741 + (A)n Simple_repeat Simple_repeat 1 34 0 361 321 44 15 chr10 16722263 16722400 -123594365 - L2 LINE L2 0 3313 3173 1879 111 8 0 chr10 16722473 16722734 -123594031 - AluY SINE Alu -23 288 26 339 250 148 0 chr10 16722770 16722858 -123593907 - MIR SINE MIR -91 171 71 1031 181 30 55 chr10 16722860 16723097 -123593668 + AluJo SINE Alu 55 285 -27 2072 132 7 0 chr10 16723113 16723417 -123593348 + AluSx SINE Alu 1 306 -6 269 318 45 23 chr10 16723754 16723886 -123592879 + MLT1K LTR MaLR 111 245 -343 272 230 11 71 chr10 16724090 16724205 -123592560 + MLT1K LTR MaLR 484 611 -4 205 75 50 25 chr10 16724365 16724405 -123592360 + A-rich Low_complexity Low_complexity 2 42 0 966 93 0 93 chr10 16725114 16725264 -123591501 + AluSq SINE Alu 35 170 -143 457 101 29 0 chr10 16725264 16725333 -123591432 + Alu SINE Alu 228 298 -11 2084 114 28 0 chr10 16726266 16726555 -123590210 - AluSx SINE Alu -15 297 1 2043 138 0 0 chr10 16727062 16727387 -123589378 - AluSx SINE Alu 0 325 1 307 252 138 49 chr10 16727840 16727963 -123588802 - L2 LINE L2 -7 3265 3132 3316 93 81 10 chr10 16728294 16728786 -123587979 - L1PA13 LINE L1 -6 6157 5631 268 267 100 11 chr10 16728835 16728925 -123587840 - L2 LINE L2 -2 3270 3173 2523 155 34 12 chr10 16730040 16730453 -123586312 - MSTB LTR MaLR 0 426 5 22 0 0 0 chr10 16731272 16731294 -123585471 + AT_rich Low_complexity Low_complexity 1 22 0 258 354 77 8 chr10 16731689 16731819 -123584946 - MER5B DNA MER1_type -10 168 30 42929 33 24 1 chr10 16782488 16787856 -123528909 - L1P1 LINE L1 -654 5501 8 1103 248 123 45 chr10 16787869 16788494 -123528271 - L1M4 LINE L1 -1905 4241 3568 10655 207 57 20 chr10 16788504 16792350 -123524415 - L1 LINE L1 -816 5566 1488 2040 127 0 0 chr10 16792350 16792634 -123524131 - AluSx SINE Alu -26 286 3 10655 207 57 20 chr10 16792634 16793890 -123522875 - L1 LINE L1 -4894 1488 280 360 261 35 26 chr10 16793896 16794011 -123522754 - MIR SINE MIR -26 236 121 23 0 0 0 chr10 16794456 16794479 -123522286 + AT_rich Low_complexity Low_complexity 1 23 0 313 369 16 0 chr10 16794710 16794832 -123521933 + L2 LINE L2 3187 3310 -3 22 35 0 0 chr10 16795390 16795419 -123521346 + AT_rich Low_complexity Low_complexity 1 29 0 316 325 79 9 chr10 16795880 16795994 -123520771 - L2 LINE L2 -8 3305 3184 354 80 0 0 chr10 16796002 16796052 -123520713 + (CCAA)n Simple_repeat Simple_repeat 2 51 0 407 286 66 52 chr10 16796295 16797110 -123519655 - L1MC5 LINE L1 -285 7676 7000 349 229 28 56 chr10 16797161 16797305 -123519460 - L1MC4 LINE L1 -975 7067 6928 790 279 9 23 chr10 16797468 16797687 -123519078 + MER58A DNA MER1_type 4 219 -5 2105 62 0 4 chr10 16797858 16798116 -123518649 + AluY SINE Alu 35 291 -20 5317 110 20 8 chr10 16798120 16798912 -123517853 - L1PA13 LINE L1 -21 6142 5341 1557 187 28 21 chr10 16799612 16799910 -123516855 - L1M3 LINE L1 -402 5766 5477 380 141 42 0 chr10 16799910 16799971 -123516794 + L1MB1 LINE L1 6094 6167 -1 1557 187 28 21 chr10 16799971 16800020 -123516745 - L1M3 LINE L1 -691 5477 5430 28 0 0 0 chr10 16801268 16801296 -123515469 + AT_rich Low_complexity Low_complexity 1 28 0 243 0 0 0 chr10 16801327 16801354 -123515411 + (T)n Simple_repeat Simple_repeat 1 27 0 362 239 9 0 chr10 16801469 16801582 -123515183 + (TCCA)n Simple_repeat Simple_repeat 1 114 0 969 176 0 6 chr10 16802033 16802192 -123514573 - FAM SINE Alu -17 158 1 232 244 94 55 chr10 16802271 16802472 -123514293 - L1M3 LINE L1 -743 5403 5195 2787 186 32 32 chr10 16802738 16803330 -123513435 - L1MC3 LINE L1 -3 7782 7191 1955 152 0 3 chr10 16803337 16803639 -123513126 - AluSx SINE Alu -11 301 1 279 264 11 23 chr10 16803655 16803742 -123513023 - MLT1F1 LTR MaLR -442 125 40 284 47 70 0 chr10 16803742 16803785 -123512980 - L1MC3 LINE L1 -684 7101 7056 303 339 45 49 chr10 16804051 16804296 -123512469 - L1M3 LINE L1 -2135 4011 3768 233 264 27 9 chr10 16804299 16804395 -123512370 + (TA)n Simple_repeat Simple_repeat 2 102 -11 1986 165 12 6 chr10 16804395 16804741 -123512024 - MER7A DNA MER2_type 0 346 1 233 264 27 9 chr10 16804741 16804754 -123512011 + (TA)n Simple_repeat Simple_repeat 102 113 0 2565 103 0 14 chr10 16805527 16805894 -123510871 - THE1B LTR MaLR -2 362 1 204 225 0 0 chr10 16807271 16807311 -123509454 + CT-rich Low_complexity Low_complexity 2 41 0 462 273 0 0 chr10 16807313 16807587 -123509178 + (TA)n Simple_repeat Simple_repeat 1 274 0 1799 163 3 10 chr10 16807797 16808092 -123508673 + AluJo SINE Alu 1 293 -19 304 250 25 0 chr10 16808125 16808205 -123508560 + MER103 DNA DNA 21 102 -64 1297 172 39 7 chr10 16808959 16809244 -123507521 + L1MA4 LINE L1 6000 6293 -7 728 228 12 12 chr10 16810023 16810190 -123506575 - MLT1E LTR MaLR -2 591 425 3670 202 34 18 chr10 16810520 16811367 -123505398 - L1MB8 LINE L1 -1 6177 5317 1818 199 21 3 chr10 16811519 16811891 -123504874 - L1MB8 LINE L1 -944 5202 4824 2227 113 0 0 chr10 16812511 16812811 -123503954 + AluSx SINE Alu 1 300 -12 5023 140 11 6 chr10 16813246 16814060 -123502705 - L1PA13 LINE L1 0 6163 5346 1292 27 0 0 chr10 16814277 16814423 -123502342 + AluYa5 SINE Alu 1 146 -165 2350 102 0 0 chr10 16815204 16815509 -123501256 - AluSx SINE Alu -5 307 3 268 299 188 8 chr10 16816900 16817017 -123499748 - MIR SINE MIR -115 147 10 193 264 19 19 chr10 16817063 16817116 -123499649 + L3b LINE CR1 1250 1302 -281 26 64 0 0 chr10 16817526 16817573 -123499192 + AT_rich Low_complexity Low_complexity 1 47 0 321 367 26 30 chr10 16819751 16820021 -123496744 + L2 LINE L2 2697 2965 -349 752 220 120 10 chr10 16822647 16822847 -123493918 - MIR SINE MIR -10 252 31 23 0 0 0 chr10 16823574 16823597 -123493168 + AT_rich Low_complexity Low_complexity 1 23 0 247 327 10 58 chr10 16826051 16826155 -123490610 + L2 LINE L2 3137 3235 -37 180 0 0 0 chr10 16826685 16826705 -123490060 + (A)n Simple_repeat Simple_repeat 1 20 0 298 277 107 9 chr10 16827646 16827758 -123489007 + MER5A DNA MER1_type 7 129 -60 315 284 28 26 chr10 16827800 16827979 -123488786 + MIR SINE MIR 3 244 -18 228 222 32 0 chr10 16828138 16828201 -123488564 - L1ME4a LINE L1 -91 6030 5966 361 327 100 19 chr10 16828277 16828537 -123488228 - L1ME4a LINE L1 -289 5832 5552 227 358 34 7 chr10 16828540 16828688 -123488077 - L1ME4a LINE L1 -630 5536 5385 1684 157 7 30 chr10 16829282 16829587 -123487178 - AluJo SINE Alu -14 298 1 2349 100 3 0 chr10 16829594 16829903 -123486862 - AluSq SINE Alu -3 310 1 2310 91 0 0 chr10 16830506 16830803 -123485962 - AluY SINE Alu -14 297 1 2467 77 0 0 chr10 16832133 16832443 -123484322 + AluY SINE Alu 1 310 -1 272 299 39 3 chr10 16832553 16832655 -123484110 + MIR SINE MIR 40 144 -64 235 231 46 15 chr10 16832785 16832850 -123483915 - L2 LINE L2 -87 3185 3119 189 107 0 0 chr10 16833227 16833255 -123483510 + (T)n Simple_repeat Simple_repeat 1 28 0 529 303 151 60 chr10 16833498 16833739 -123483026 + L2 LINE L2 1602 1820 -1493 5549 135 68 30 chr10 16833739 16834771 -123481994 + MER11C LTR ERVK 1 1071 0 529 303 151 60 chr10 16834771 16835897 -123480868 + L2 LINE L2 1820 3096 -217 1584 179 67 24 chr10 16836551 16836880 -123479885 - MER2 DNA MER2_type 0 344 2 4876 213 48 30 chr10 16837043 16838241 -123478524 + Charlie1a DNA MER1_type 2 1220 -235 334 212 0 0 chr10 16838253 16838319 -123478446 + Charlie1a DNA MER1_type 1390 1455 0 188 247 0 135 chr10 16839549 16839638 -123477127 + MIR SINE MIR 116 192 -70 27 0 0 0 chr10 16840034 16840061 -123476704 + AT_rich Low_complexity Low_complexity 1 27 0 1344 315 37 8 chr10 16840624 16841133 -123475632 + L2 LINE L2 2545 3069 -244 250 294 78 39 chr10 16842254 16842407 -123474358 - MIR SINE MIR 0 262 104 439 173 0 0 chr10 16842626 16842701 -123474064 + AluY SINE Alu 126 200 -111 325 344 80 0 chr10 16843011 16843136 -123473629 + MIR3 SINE MIR 32 166 -42 335 319 162 22 chr10 16845343 16845572 -123471193 + MIR SINE MIR 2 262 0 226 185 0 62 chr10 16845774 16845862 -123470903 + T-rich Low_complexity Low_complexity 3 137 0 2338 84 7 0 chr10 16846711 16847007 -123469758 - AluSq SINE Alu -15 298 1 226 122 24 0 chr10 16848041 16848082 -123468683 + MER103 DNA DNA 26 67 -99 416 300 41 59 chr10 16848219 16848389 -123468376 + MIR3 SINE MIR 36 202 -6 418 236 28 9 chr10 16848619 16848725 -123468040 + L2 LINE L2 2309 2416 -898 1661 212 28 33 chr10 16849143 16849535 -123467230 + MLT1B LTR MaLR 1 390 0 5114 129 21 10 chr10 16849563 16850399 -123466366 - Tigger1 DNA MER2_type 0 2418 1573 813 278 74 5 chr10 16850398 16850682 -123466083 + MLT1F LTR MaLR 8 351 -244 * 303 301 91 21 chr10 16851152 16851295 -123465470 + L1 LINE L1 4015 4167 -1979 1478 156 51 32 chr10 16851519 16851834 -123464931 - MER44D DNA MER2_type -15 594 4 688 273 126 56 chr10 16852360 16852947 -123463818 - L1MC5 LINE L1 -26 7935 7308 247 306 99 9 chr10 16852972 16853083 -123463682 - L1MC4 LINE L1 -568 7474 7354 256 221 0 0 chr10 16853159 16853228 -123463537 - L1MC4 LINE L1 -733 7228 7161 394 275 88 36 chr10 16853240 16853658 -123463107 - L1MEc LINE L1 -3056 3073 2634 1064 179 0 0 chr10 16854170 16854349 -123462416 - AluJb SINE Alu -5 307 129 305 280 0 0 chr10 16854449 16854524 -123462241 + MIR SINE MIR 73 147 -115 296 212 159 9 chr10 16854616 16854729 -123462036 - MIR SINE MIR -5 257 128 264 258 104 18 chr10 16854771 16854934 -123461831 + L1MEd LINE L1 8 184 -5935 21 0 0 0 chr10 16855142 16855163 -123461602 + AT_rich Low_complexity Low_complexity 1 21 0 354 357 25 10 chr10 16855187 16855383 -123461382 - L1MEc LINE L1 -4808 1502 1304 564 238 75 37 chr10 16855386 16855735 -123461030 - L1MEc LINE L1 -4862 1257 896 238 24 0 49 chr10 16855846 16855887 -123460878 + (TTTTTG)n Simple_repeat Simple_repeat 4 42 0 414 343 19 56 chr10 16855918 16856239 -123460526 - L1MEc LINE L1 -5479 640 332 34951 92 9 15 chr10 16856506 16862679 -123454086 - L1PA6 LINE L1 -8 6146 11 195 42 0 0 chr10 16862694 16862718 -123454047 + (T)n Simple_repeat Simple_repeat 1 24 0 908 196 12 6 chr10 16864676 16864849 -123451916 - FAM SINE Alu -1 174 1 280 207 18 0 chr10 16864854 16864965 -123451800 + (TA)n Simple_repeat Simple_repeat 2 114 0 2293 85 0 0 chr10 16864965 16865248 -123451517 - AluSc SINE Alu -26 283 1 1268 227 43 32 chr10 16866038 16866413 -123450352 - MLT1B LTR MaLR -11 379 1 633 233 125 22 chr10 16866413 16866645 -123450120 - L1MC4 LINE L1 -466 7576 7321 667 357 38 20 chr10 16866683 16867131 -123449634 + HERV16 LTR ERVL 1070 1525 -3471 691 341 74 22 chr10 16867166 16867439 -123449326 - LTR16A LTR ERVL 0 450 148 1709 215 83 32 chr10 16867439 16867931 -123448834 - MLT2B1 LTR ERVL -1 519 3 691 341 74 22 chr10 16867931 16868062 -123448703 - LTR16A LTR ERVL -302 148 25 653 299 40 18 chr10 16868215 16868493 -123448272 - HERV16 LTR ERVL -4108 888 605 2067 142 0 3 chr10 16868625 16868928 -123447837 - AluSx SINE Alu -10 302 1 598 309 100 19 chr10 16868928 16869297 -123447468 - HERV16 LTR ERVL -4445 551 153 871 313 38 3 chr10 16869440 16869808 -123446957 - LTR16A LTR ERVL -63 387 7 2249 105 0 3 chr10 16869874 16870169 -123446596 + AluSc SINE Alu 1 294 -15 537 194 0 37 chr10 16870218 16870326 -123446439 + U13 snRNA snRNA 1 104 0 1972 155 0 3 chr10 16870341 16870644 -123446121 + AluJo SINE Alu 1 302 -10 311 333 38 25 chr10 16870648 16870807 -123445958 + HERV16 LTR ERVL 1727 1887 -3109 291 243 0 0 chr10 16870948 16871018 -123445747 + HERV16 LTR ERVL 2015 2084 -2912 729 253 76 28 chr10 16871023 16871222 -123445543 - L1MEc LINE L1 -4132 2264 2076 198 0 0 0 chr10 16871222 16871244 -123445521 + (TTTTA)n Simple_repeat Simple_repeat 1 22 0 2164 107 0 0 chr10 16871244 16871524 -123445241 - AluSx SINE Alu -32 280 1 729 253 76 28 chr10 16871524 16871679 -123445086 - L1MEc LINE L1 -4319 2077 1892 1960 108 57 0 chr10 16871911 16872121 -123444644 - AluSp SINE Alu 0 346 113 186 71 0 0 chr10 16872121 16872149 -123444616 + (TTA)n Simple_repeat Simple_repeat 1 28 0 1960 108 57 0 chr10 16872149 16872250 -123444515 - AluSp SINE Alu -233 113 19 2147 178 31 7 chr10 16872372 16872794 -123443971 + MSTB1 LTR MaLR 1 432 0 378 324 83 23 chr10 16872830 16873046 -123443719 + L1ME LINE L1 2676 2904 -3242 2900 13 0 0 chr10 16873530 16873847 -123442918 + AluYb8 SINE Alu 1 317 -1 636 133 0 25 chr10 16873939 16874059 -123442706 + LTR9B LTR ERV1 445 561 -83 548 305 65 10 chr10 16874491 16874875 -123441890 + L1ME LINE L1 3787 4191 -1955 30 45 0 0 chr10 16875144 16875188 -123441577 + AT_rich Low_complexity Low_complexity 1 44 0 1953 115 0 4 chr10 16875331 16875600 -123441165 + AluSg SINE Alu 39 306 -4 377 231 68 41 chr10 16875755 16875902 -123440863 + L1ME LINE L1 5546 5696 -425 255 209 86 79 chr10 16875932 16876071 -123440694 + L1ME LINE L1 5759 5898 -223 327 25 0 0 chr10 16876074 16876114 -123440651 + (TG)n Simple_repeat Simple_repeat 1 40 0 183 284 54 14 chr10 16876763 16876837 -123439928 + L2 LINE L2 2720 2796 -518 210 148 52 44 chr10 16877705 16877840 -123438925 + (TATATG)n Simple_repeat Simple_repeat 3 138 0 * 373 154 19 49 chr10 16877807 16877969 -123438796 + (TA)n Simple_repeat Simple_repeat 1 157 0 233 127 42 42 chr10 16878025 16878096 -123438669 + (CATATA)n Simple_repeat Simple_repeat 3 73 0 2275 101 33 56 chr10 16878280 16878522 -123438243 + L1PA16 LINE L1 5780 6011 -155 2272 126 0 0 chr10 16878522 16878832 -123437933 + AluSx SINE Alu 1 310 -2 2275 101 33 56 chr10 16878832 16878984 -123437781 + L1PA16 LINE L1 6011 6165 -1 1445 200 128 17 chr10 16880415 16880820 -123435945 - MER66A LTR ERV1 0 478 29 202 365 12 12 chr10 16880951 16881036 -123435729 + L2 LINE L2 3187 3271 -1 254 327 20 10 chr10 16882220 16882321 -123434444 + L2 LINE L2 2717 2818 -496 193 264 220 0 chr10 16882454 16882545 -123434220 + L2 LINE L2 3162 3272 0 2409 107 0 0 chr10 16882557 16882867 -123433898 - AluSp SINE Alu -3 310 1 1318 214 118 65 chr10 16882924 16883527 -123433238 + MLT1E2 LTR MaLR 1 626 0 185 0 0 39 chr10 16883554 16883580 -123433185 + (TG)n Simple_repeat Simple_repeat 2 26 0 5385 84 18 5 chr10 16884346 16885130 -123431635 + L1PA11 LINE L1 5379 6172 -2 185 287 120 37 chr10 16886136 16886244 -123430521 - MER5A DNA MER1_type -25 164 48 1444 6 0 0 chr10 16886761 16886920 -123429845 - AluYb8 SINE Alu -13 305 147 2219 106 0 0 chr10 16887241 16887525 -123429240 - AluSx SINE Alu -28 284 1 261 180 0 0 chr10 16887620 16887670 -123429095 - MER53 DNA DNA -3 186 137 646 149 18 0 chr10 16887674 16887788 -123428977 - AluY SINE Alu -1 310 195 386 219 81 0 chr10 16887789 16887912 -123428853 - MER53 DNA DNA -55 134 2 198 294 103 15 chr10 16887938 16888006 -123428759 + L2 LINE L2 3181 3254 -18 212 308 0 0 chr10 16888804 16888856 -123427909 + (CA)n Simple_repeat Simple_repeat 2 53 0 299 254 129 8 chr10 16888899 16889059 -123427706 + L1ME LINE L1 5401 5598 -523 186 43 0 0 chr10 16889059 16889082 -123427683 + (TA)n Simple_repeat Simple_repeat 2 24 0 299 254 129 8 chr10 16889082 16889119 -123427646 + L1ME LINE L1 5598 5629 -492 25 0 0 0 chr10 16889587 16889612 -123427153 + AT_rich Low_complexity Low_complexity 1 25 0 2086 100 0 56 chr10 16890138 16890459 -123426306 - AluSg SINE Alu -7 303 1 370 356 148 5 chr10 16891463 16891665 -123425100 + L2 LINE L2 3022 3252 -20 234 0 0 0 chr10 16892476 16892502 -123424263 + (T)n Simple_repeat Simple_repeat 1 26 0 1417 208 17 10 chr10 16893371 16893664 -123423101 - AluJo SINE Alu -7 295 1 575 321 36 40 chr10 16894063 16894158 -123422607 + MIR SINE MIR 15 109 -153 2414 87 3 0 chr10 16894158 16894457 -123422308 - AluSx SINE Alu -12 300 1 575 321 36 40 chr10 16894457 16894610 -123422155 + MIR SINE MIR 109 262 0 444 328 8 0 chr10 16894753 16894875 -123421890 - L2 LINE L2 -4 3268 3146 446 345 44 29 chr10 16895428 16895703 -123421062 - L1MEd LINE L1 -5290 829 551 955 230 28 92 chr10 16896366 16896729 -123420036 + MLT1A1 LTR MaLR 1 442 -25 2240 217 110 34 chr10 16896785 16897540 -123419225 - L1ME2 LINE L1 -178 5986 5108 2141 101 33 16 chr10 16897540 16897846 -123418919 - AluY SINE Alu 0 311 1 2240 217 110 34 chr10 16897846 16898200 -123418565 - L1ME2 LINE L1 -1056 5108 4782 2036 188 166 2 chr10 16898269 16898716 -123418049 - MLT2B1 LTR ERVL 0 520 1 581 204 39 163 chr10 16898716 16898774 -123417991 - L1ME2 LINE L1 -1420 4726 4662 2194 131 46 8 chr10 16898774 16899125 -123417640 + THE1B LTR MaLR 1 364 0 581 204 39 163 chr10 16899125 16899576 -123417189 - L1ME2 LINE L1 -1484 4662 4280 1138 137 4 9 chr10 16899600 16899826 -123416939 - L1HS LINE L1 -13 6142 5918 1228 161 5 0 chr10 16899926 16900112 -123416653 - AluSq SINE Alu -124 189 3 2472 66 0 3 chr10 16901309 16901612 -123415153 + AluY SINE Alu 5 306 -5 1649 217 3 3 chr10 16901778 16902077 -123414688 + AluJo SINE Alu 1 299 -13 904 197 44 6 chr10 16902868 16903051 -123413714 - AluJb SINE Alu -22 290 101 201 299 122 54 chr10 16903777 16903924 -123412841 - MIR SINE MIR -42 220 64 21 57 0 0 chr10 16904024 16904059 -123412706 + AT_rich Low_complexity Low_complexity 1 35 0 245 275 66 0 chr10 16904155 16904246 -123412519 + L1ME4a LINE L1 5486 5582 -660 373 304 92 29 chr10 16904389 16904596 -123412169 + L1ME4a LINE L1 5701 5920 -201 403 278 90 33 chr10 16904793 16905005 -123411760 - L2 LINE L2 0 3313 3090 197 356 98 23 chr10 16905158 16905290 -123411475 - L2 LINE L2 -408 2906 2765 3259 224 48 16 chr10 16905324 16905566 -123411199 + L1ME1 LINE L1 4382 4615 -1551 2150 113 0 17 chr10 16905566 16905867 -123410898 - AluSq SINE Alu -17 296 1 3259 224 48 16 chr10 16905867 16907355 -123409410 + L1ME1 LINE L1 4615 6162 -4 1740 109 34 69 chr10 16908670 16908716 -123408049 - L1PA15 LINE L1 0 6165 6119 2434 110 31 11 chr10 16908716 16909072 -123407693 + THE1B LTR MaLR 1 363 -1 1740 109 34 69 chr10 16909072 16909345 -123407420 - L1PA15 LINE L1 -46 6119 5857 2166 115 0 10 chr10 16909963 16910268 -123406497 - AluSc SINE Alu -7 302 1 253 276 263 6 chr10 16910299 16910455 -123406310 + MIR SINE MIR 54 249 -13 5030 215 177 40 chr10 16910608 16910676 -123406089 - L1MDa LINE L1 -4375 2165 2108 1755 186 42 0 chr10 16910676 16911009 -123405756 + MER7A DNA MER2_type 1 345 -1 5030 215 177 40 chr10 16911009 16911770 -123404995 - L1MDa LINE L1 -4432 2108 1452 1510 183 60 30 chr10 16911770 16912070 -123404695 - AluJb SINE Alu -3 309 1 5030 215 177 40 chr10 16912070 16912145 -123404620 - L1MDa LINE L1 -5088 1452 1389 1789 145 24 17 chr10 16912145 16912434 -123404331 - AluJb SINE Alu -21 291 1 5030 215 177 40 chr10 16912434 16913315 -123403450 - L1MDa LINE L1 -5151 1389 630 288 0 0 0 chr10 16913315 16913347 -123403418 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1718 180 0 23 chr10 16913349 16913649 -123403116 - AluSx SINE Alu -19 293 1 5030 215 177 40 chr10 16913649 16913751 -123403014 - L1MDa LINE L1 -5910 630 13 413 351 59 28 chr10 16913826 16914114 -123402651 - HAL1b LINE L1 -613 735 439 2273 175 24 14 chr10 16916869 16917291 -123399474 + MSTB LTR MaLR 1 426 0 1696 16 0 0 chr10 16917698 16917892 -123398873 + L1PA3 LINE L1 5962 6155 0 867 205 51 0 chr10 16918565 16918760 -123398005 - Tigger1 DNA MER2_type -2213 205 1 2189 208 46 7 chr10 16918765 16919309 -123397456 - L1MCa LINE L1 -5842 584 20 2292 100 0 3 chr10 16919531 16919841 -123396924 - AluSc SINE Alu 0 309 1 964 79 0 0 chr10 16920070 16920197 -123396568 - AluY SINE Alu -184 127 1 3217 208 51 11 chr10 16920198 16921576 -123395189 - L1M4 LINE L1 -400 5778 4348 4057 138 17 9 chr10 16921595 16921758 -123395007 - L1PA16 LINE L1 -1 6165 6005 2512 94 0 76 chr10 16921758 16922152 -123394613 - THE1B LTR MaLR 0 364 1 4057 138 17 9 chr10 16922152 16922683 -123394082 - L1PA16 LINE L1 -161 6005 5465 1255 219 52 39 chr10 16922683 16923132 -123393633 + MLT2B1 LTR ERVL 2 509 -11 3025 250 42 4 chr10 16923160 16923916 -123392849 + ERVL-B1 LTR ERVL 27 811 -4953 249 122 0 75 chr10 16923916 16923989 -123392776 - L1M4 LINE L1 -2220 3926 3859 1848 257 67 19 chr10 16923991 16924005 -123392760 - L1M4 LINE L1 -2937 3209 3197 2572 80 26 0 chr10 16924005 16924356 -123392409 + L1PA13 LINE L1 5803 6162 -1 1848 257 67 19 chr10 16924356 16925290 -123391475 - L1M4 LINE L1 -2949 3197 2215 414 264 72 47 chr10 16925504 16925553 -123391212 - L1M4 LINE L1 -2952 3194 3148 890 185 14 28 chr10 16925553 16925769 -123390996 - L1MA10 LINE L1 -13 6321 6109 414 264 72 47 chr10 16925769 16925954 -123390811 - L1M4 LINE L1 -2998 3148 2954 2476 77 0 6 chr10 16927027 16927339 -123389426 - AluY SINE Alu -1 310 1 666 298 54 6 chr10 16927348 16927680 -123389085 - L1M4 LINE L1 -3265 2881 2534 630 140 19 121 chr10 16927680 16927837 -123388928 - MER6 DNA MER2_type 0 865 4 24 0 0 0 chr10 16928140 16928164 -123388601 + AT_rich Low_complexity Low_complexity 1 24 0 384 306 165 6 chr10 16928219 16928389 -123388376 + MIR SINE MIR 18 214 -48 1882 171 0 10 chr10 16928429 16928734 -123388031 - AluJb SINE Alu -9 303 2 1965 122 16 36 chr10 16929945 16930249 -123386516 - AluSg SINE Alu -12 298 1 942 298 116 17 chr10 16931361 16931714 -123385051 - L2 LINE L2 -2719 595 208 1867 147 7 17 chr10 16932110 16932410 -123384355 + AluSx SINE Alu 1 297 -15 239 313 31 0 chr10 16932715 16932779 -123383986 + (CATG)n Simple_repeat Simple_repeat 2 67 0 792 143 16 0 chr10 16933309 16933435 -123383330 + BC200 scRNA scRNA 2 129 -71 219 36 0 0 chr10 16933437 16933465 -123383300 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2214 96 0 0 chr10 16934639 16934930 -123381835 + AluSg SINE Alu 1 291 -19 1100 199 111 20 chr10 16934935 16935287 -123381478 + L1MB8 LINE L1 5780 6163 -15 6132 154 52 87 chr10 16935353 16935467 -123381298 + L1MCa LINE L1 20 136 -6290 3808 29 0 0 chr10 16935467 16935916 -123380849 + L1PA4 LINE L1 5704 6152 -3 6132 154 52 87 chr10 16935916 16936991 -123379774 + L1MCa LINE L1 136 1147 -5279 1640 43 10 0 chr10 16936991 16937232 -123379533 + L1PA4 LINE L1 5938 6180 0 6132 154 52 87 chr10 16937232 16937570 -123379195 + L1MCa LINE L1 1147 1495 -4931 335 274 42 0 chr10 16937632 16937727 -123379038 + L1MCa LINE L1 2636 2734 -3873 13701 101 1 15 chr10 16937829 16939927 -123376838 + L1PA6 LINE L1 615 2682 -3464 20182 62 9 2 chr10 16940107 16943543 -123373222 + L1PA6 LINE L1 2706 6148 -6 326 80 40 0 chr10 16943557 16943607 -123373158 + MLT2A1 LTR ERVL 393 444 0 25534 105 11 6 chr10 16943607 16947298 -123369467 + HERVL-A1 LTR ERVL 1 3710 -1944 2314 101 0 3 chr10 16947300 16947606 -123369159 - AluSx SINE Alu -7 305 1 1042 119 0 0 chr10 16947612 16947746 -123369019 - AluSg SINE Alu -174 136 3 1452 108 5 0 chr10 16947747 16947961 -123368804 + HERVL-A1 LTR ERVL 3709 3923 -1731 2239 134 3 21 chr10 16948064 16948445 -123368320 - MER4D LTR ERV1 -528 375 2 2251 176 18 18 chr10 16948535 16948983 -123367782 + MLT2B2 LTR ERVL 5 452 -63 997 166 270 10 chr10 16948993 16949282 -123367483 - MER47A DNA MER2_type -2 364 1 198 167 0 0 chr10 16949284 16949320 -123367445 + (TG)n Simple_repeat Simple_repeat 1 36 0 279 159 111 0 chr10 16949323 16949386 -123367379 + MLT2B2 LTR ERVL 451 520 0 1405 249 57 10 chr10 16949387 16949776 -123366989 + ERVL-B2 LTR ERVL 2 408 -5356 1357 181 0 0 chr10 16949776 16949992 -123366773 + AluSg/x SINE Alu 85 300 -10 5133 196 24 26 chr10 16950014 16950597 -123366168 + ERVL-B2 LTR ERVL 401 983 -4781 2009 141 7 3 chr10 16950597 16950901 -123365864 - AluSg SINE Alu -5 305 1 5133 196 24 26 chr10 16950901 16951386 -123365379 + ERVL-B2 LTR ERVL 983 1467 -4297 305 164 0 0 chr10 16951624 16951679 -123365086 - LTR43 LTR ERV1 -325 277 223 4003 210 29 10 chr10 16951920 16952134 -123364631 + ERVL-B2 LTR ERVL 1460 1669 -4095 3098 107 34 0 chr10 16952134 16952179 -123364586 - MLT2A2 LTR ERVL 0 453 411 330 26 0 0 chr10 16952179 16952218 -123364547 + (TG)n Simple_repeat Simple_repeat 2 40 0 243 0 0 0 chr10 16952217 16952244 -123364521 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 3098 107 34 0 chr10 16952218 16952636 -123364129 - MLT2A2 LTR ERVL -42 411 1 4003 210 29 10 chr10 16952636 16953284 -123363481 + ERVL-B2 LTR ERVL 1669 2338 -3426 1726 153 60 0 chr10 16953278 16953579 -123363186 - ERVL LTR ERVL -2062 3702 3384 * 1468 151 28 8 chr10 16953576 16953827 -123362938 + ERVL LTR ERVL 4652 4907 -857 * 2440 144 0 3 chr10 16953837 16954226 -123362539 + ERVL LTR ERVL 2336 2723 -3041 2235 190 65 7 chr10 16954233 16954676 -123362089 - MER21B LTR ERV1 -371 492 24 3782 166 9 6 chr10 16954676 16955331 -123361434 + ERVL LTR ERVL 2709 3365 -2399 1323 155 60 16 chr10 16955327 16955578 -123361187 + ERVL LTR ERVL 1999 2260 -3504 * 5267 172 50 13 chr10 16955580 16956611 -123360154 + ERVL LTR ERVL 3372 4441 -1323 5052 174 17 51 chr10 16956711 16957791 -123358974 + ERVL LTR ERVL 4433 5475 -289 267 346 8 8 chr10 16957795 16957922 -123358843 - L2 LINE L2 -1408 1906 1780 3378 189 29 39 chr10 16959709 16959955 -123356810 + L1MC3 LINE L1 6471 6718 -1067 1510 167 17 33 chr10 16959955 16960370 -123356395 - AluJo SINE Alu 0 312 1 3378 189 29 39 chr10 16960370 16960918 -123355847 + L1MC3 LINE L1 6718 7257 -528 238 295 124 3 chr10 16961796 16962094 -123354671 + L1M4 LINE L1 3605 3938 -2208 741 283 40 17 chr10 16962351 16962651 -123354114 + L1MC4a LINE L1 6559 6865 -943 240 319 60 60 chr10 16962653 16962885 -123353880 + L1M4 LINE L1 11 242 -6300 603 331 121 35 chr10 16963050 16963817 -123352948 - L1 LINE L1 -1336 4810 3978 326 362 26 0 chr10 16963822 16963938 -123352827 + MIR SINE MIR 2 120 -142 304 208 10 21 chr10 16963988 16964084 -123352681 + (TA)n Simple_repeat Simple_repeat 1 95 0 502 203 77 8 chr10 16964086 16964332 -123352433 - L1 LINE L1 -2828 3318 3056 * 1107 264 96 10 chr10 16964324 16964870 -123351895 - L1M4 LINE L1 -2275 3871 3216 186 43 0 0 chr10 16964870 16964893 -123351872 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1107 264 96 10 chr10 16964893 16965015 -123351750 - L1M4 LINE L1 -2930 3216 3106 21 0 0 0 chr10 16965645 16965666 -123351099 + AT_rich Low_complexity Low_complexity 1 21 0 314 270 58 108 chr10 16967765 16968006 -123348759 - L2 LINE L2 -49 3223 2995 2543 55 0 10 chr10 16968034 16968346 -123348419 + AluY SINE Alu 1 309 -2 6308 89 12 0 chr10 16969198 16970279 -123346486 + L1PA8 LINE L1 5066 6158 -14 23 0 0 0 chr10 16970553 16970576 -123346189 + AT_rich Low_complexity Low_complexity 1 23 0 2140 119 7 10 chr10 16971824 16972126 -123344639 - AluSx SINE Alu -11 301 1 929 288 9 0 chr10 16972301 16972527 -123344238 - MIR SINE MIR -31 231 4 29 32 0 48 chr10 16972659 16972688 -123344077 + AT_rich Low_complexity Low_complexity 1 30 -29 1593 185 18 4 chr10 16972688 16972969 -123343796 + AluJo SINE Alu 1 285 -27 29 32 0 48 chr10 16972969 16973001 -123343764 + AT_rich Low_complexity Low_complexity 30 59 0 230 146 85 12 chr10 16974448 16974530 -123342235 + (TA)n Simple_repeat Simple_repeat 1 88 0 2265 111 0 0 chr10 16975850 16976148 -123340617 - AluSx SINE Alu -14 298 1 2792 221 49 37 chr10 16976496 16978239 -123338526 + L1ME1 LINE L1 4206 5963 -203 508 336 66 8 chr10 16980061 16980302 -123336463 - MIR SINE MIR -1 261 7 314 308 136 0 chr10 16980452 16980621 -123336144 - L2 LINE L2 -936 2378 2187 196 91 45 0 chr10 16982374 16982418 -123334347 + (TA)n Simple_repeat Simple_repeat 1 46 0 2381 90 0 0 chr10 16982497 16982798 -123333967 - AluSg SINE Alu -9 301 1 239 153 83 28 chr10 16983818 16983890 -123332875 + L1MEd LINE L1 70 145 -5974 2221 114 0 10 chr10 16984059 16984365 -123332400 - AluSg SINE Alu -7 303 1 225 349 28 9 chr10 16984682 16984791 -123331974 + L1MEd LINE L1 531 641 -5478 1093 134 27 5 chr10 16985260 16985447 -123331318 - L1PB3 LINE L1 -7 6147 5957 507 281 72 26 chr10 16985576 16985967 -123330798 + L1MEd LINE L1 700 1108 -5011 317 319 30 6 chr10 16986289 16986455 -123330310 + L1 LINE L1 3496 3665 -2481 424 238 35 28 chr10 16986581 16986851 -123329914 - LTR52 LTR ERVL -5 416 117 451 282 13 51 chr10 16987159 16987315 -123329450 - LTR33 LTR ERVL -306 215 66 352 249 216 0 chr10 16987345 16987526 -123329239 - L1MDa LINE L1 -4225 2315 2096 10295 92 6 13 chr10 16987882 16989365 -123327400 + HERVL-A1 LTR ERVL 4182 5654 0 3366 86 5 0 chr10 16989365 16989807 -123326958 + MLT2A1 LTR ERVL 1 444 0 393 206 11 11 chr10 16989812 16989904 -123326861 + L1M4c LINE L1 593 684 -5700 195 184 0 0 chr10 16989960 16989998 -123326767 + T-rich Low_complexity Low_complexity 1 38 0 1899 210 25 49 chr10 16990132 16990745 -123326020 + L1M4c LINE L1 676 1273 -5111 * 2092 288 72 85 chr10 16990738 16991931 -123324834 + L1 LINE L1 3700 4877 -1269 421 252 9 28 chr10 16994397 16994504 -123322261 - MER110 LTR ERV1 0 491 387 210 192 0 0 chr10 16994548 16994600 -123322165 + (TGGA)n Simple_repeat Simple_repeat 1 52 0 428 279 34 44 chr10 16994650 16994854 -123321911 - MER110 LTR ERV1 -102 389 188 3558 128 40 3 chr10 16996613 16997220 -123319545 + L1PB2 LINE L1 5523 6151 0 539 181 150 8 chr10 16997220 16997347 -123319418 - MLT1A1 LTR MaLR -220 145 1 4310 225 44 21 chr10 16997356 16998861 -123317904 + L1 LINE L1 3036 4611 -1535 467 273 12 55 chr10 17002117 17002282 -123314483 + L2 LINE L2 3156 3313 0 1649 176 44 7 chr10 17004246 17004541 -123312224 + AluSx SINE Alu 6 311 -1 189 107 0 0 chr10 17006256 17006284 -123310481 + (CA)n Simple_repeat Simple_repeat 2 29 0 1695 171 0 17 chr10 17006598 17006896 -123309869 - AluJb SINE Alu -19 293 1 24 32 0 0 chr10 17007034 17007065 -123309700 + AT_rich Low_complexity Low_complexity 1 31 0 270 281 51 34 chr10 17007077 17007369 -123309396 - L1MEd LINE L1 -4911 1208 912 584 103 35 9 chr10 17007377 17007493 -123309272 + CT-rich Low_complexity Low_complexity 2 120 0 525 318 59 3 chr10 17007533 17007822 -123308943 - L1MEd LINE L1 -5297 822 518 3974 208 23 9 chr10 17007977 17009037 -123307728 - L1MB7 LINE L1 -16 6168 5084 574 221 13 6 chr10 17009071 17009229 -123307536 - L1MEd LINE L1 -5957 162 4 2329 104 0 0 chr10 17009284 17009581 -123307184 - AluSg SINE Alu -13 297 1 453 333 83 15 chr10 17009597 17009803 -123306962 + MIR SINE MIR 34 251 -11 251 323 11 11 chr10 17009971 17010064 -123306701 - MIR SINE MIR -122 140 48 188 83 0 28 chr10 17010245 17010281 -123306484 + (TTAAA)n Simple_repeat Simple_repeat 1 35 0 547 209 0 31 chr10 17010281 17010410 -123306355 - MER3 DNA MER1_type -78 131 7 924 71 8 0 chr10 17011317 17011444 -123305321 - THE1C LTR MaLR 0 375 248 919 81 0 0 chr10 17011495 17011618 -123305147 - THE1C LTR MaLR 0 375 253 3648 120 31 21 chr10 17011851 17012201 -123304564 - L1PA16 LINE L1 -16 6150 5790 2338 139 25 3 chr10 17012201 17012568 -123304197 - THE1C LTR MaLR 0 375 1 3648 120 31 21 chr10 17012568 17012832 -123303933 - L1PA16 LINE L1 -376 5790 5530 1548 129 4 0 chr10 17012838 17013079 -123303686 + LOR1a LTR ERV1 256 497 0 428 214 10 0 chr10 17013081 17013179 -123303586 + L1MC2 LINE L1 6246 6344 0 244 395 18 17 chr10 17014236 17014460 -123302305 + MIR SINE MIR 7 226 -36 1277 199 60 9 chr10 17014537 17014854 -123301911 + L1MC2 LINE L1 5987 6319 -25 470 299 9 23 chr10 17015248 17015469 -123301296 + Charlie2a DNA MER1_type 571 788 -2074 943 122 27 4 chr10 17015471 17015659 -123301106 + AluSx SINE Alu 35 301 -11 474 293 46 26 chr10 17015675 17016020 -123300745 + Charlie2a DNA MER1_type 790 1141 -1721 7373 168 7 21 chr10 17016028 17017534 -123299231 + L1P LINE L1 3680 5164 -982 722 128 0 0 chr10 17017534 17017636 -123299129 + AluSq/x SINE Alu 26 127 -185 27 62 0 0 chr10 17017742 17017790 -123298975 + AT_rich Low_complexity Low_complexity 1 48 0 207 195 0 0 chr10 17017835 17017876 -123298889 + (AATTG)n Simple_repeat Simple_repeat 4 44 0 542 176 88 14 chr10 17017878 17018026 -123298739 + Charlie2a DNA MER1_type 1488 1646 -1216 227 149 0 21 chr10 17018051 17018098 -123298667 + (GGAGA)n Simple_repeat Simple_repeat 4 49 0 2222 112 13 0 chr10 17018119 17018423 -123298342 + AluSp SINE Alu 1 308 -5 2250 108 0 3 chr10 17018476 17018771 -123297994 + AluSg1 SINE Alu 1 294 -15 1819 211 110 24 chr10 17018775 17019496 -123297269 + Charlie2a DNA MER1_type 1652 2434 -428 381 227 80 0 chr10 17019609 17019785 -123296980 + Charlie2a DNA MER1_type 2424 2613 -249 2553 161 58 8 chr10 17019824 17020309 -123296456 - L1MB1 LINE L1 0 6168 5660 3983 99 24 10 chr10 17020309 17020893 -123295872 + L1PA10 LINE L1 5567 6158 -10 1372 155 30 15 chr10 17020923 17021188 -123295577 - L1MB1 LINE L1 -494 5674 5406 35 71 0 0 chr10 17021278 17021348 -123295417 + AT_rich Low_complexity Low_complexity 1 70 0 617 240 96 24 chr10 17021362 17021570 -123295195 + MER58A DNA MER1_type 1 223 -1 256 185 31 0 chr10 17021622 17021687 -123295078 - HAL1 LINE L1 -131 2376 2310 1808 286 93 3 chr10 17021956 17022144 -123294621 - L1ME3A LINE L1 -22 6408 6238 2299 122 0 0 chr10 17022144 17022455 -123294310 - AluSq SINE Alu -2 311 1 1808 286 93 3 chr10 17022455 17023049 -123293716 - L1ME3A LINE L1 -192 6238 5555 207 0 0 0 chr10 17023100 17023123 -123293642 + (TG)n Simple_repeat Simple_repeat 2 24 0 21 0 0 0 chr10 17023123 17023144 -123293621 + AT_rich Low_complexity Low_complexity 1 21 0 800 296 47 51 chr10 17023335 17023490 -123293275 - L1ME3A LINE L1 -1160 5246 5092 2544 39 10 10 chr10 17023490 17023801 -123292964 - AluY SINE Alu 0 311 1 800 296 47 51 chr10 17023801 17024139 -123292626 - L1ME3A LINE L1 -1314 5092 4755 187 255 106 0 chr10 17024146 17024193 -123292572 - L2 LINE L2 -63 3209 3158 215 254 79 0 chr10 17024324 17024387 -123292378 + MER5A DNA MER1_type 100 167 -22 21 0 0 0 chr10 17024425 17024446 -123292319 + AT_rich Low_complexity Low_complexity 1 21 0 581 248 48 61 chr10 17024446 17024769 -123291996 - L1MEc LINE L1 -5039 1401 1069 249 212 94 0 chr10 17025321 17025406 -123291359 - LTR50 LTR ERVL -8 787 695 2450 112 3 0 chr10 17025442 17025798 -123290967 + THE1B LTR MaLR 1 357 -7 633 236 124 32 chr10 17025817 17026170 -123290595 - LTR50 LTR ERVL -190 605 140 265 294 20 26 chr10 17026203 17026356 -123290409 + MER104 DNA Tc2 2 153 -27 6989 25 1 0 chr10 17026483 17027369 -123289396 - L1PA3 LINE L1 -2861 3285 2399 17272 33 0 2 chr10 17027369 17030225 -123286540 + L1PA3 LINE L1 3296 6152 -3 2051 130 7 10 chr10 17030299 17030606 -123286159 - AluSg SINE Alu -4 306 1 1193 223 50 60 chr10 17032085 17032219 -123284546 + MLT1B LTR MaLR 11 145 -245 1899 157 0 7 chr10 17032219 17032500 -123284265 - AluSx SINE Alu -32 280 2 1193 223 50 60 chr10 17032500 17032747 -123284018 + MLT1B LTR MaLR 145 388 -2 3225 84 16 7 chr10 17032947 17033387 -123283378 - MLT2A1 LTR ERVL 0 444 1 3222 128 28 26 chr10 17034851 17035427 -123281338 + MER41B LTR ERV1 44 620 -15 489 299 20 7 chr10 17036435 17036582 -123280183 + MLT2E LTR ERVL 3 151 -477 1814 136 55 0 chr10 17036601 17036909 -123279856 - MER1A DNA MER1_type -1 528 204 22 0 0 0 chr10 17040000 17040022 -123276743 + GC_rich Low_complexity Low_complexity 1 22 0 385 256 17 17 chr10 17040807 17040924 -123275841 - MIR3 SINE MIR -9 199 83 2648 176 6 45 chr10 17040931 17041460 -123275305 + MLT2B3 LTR ERVL 1 508 -46 363 71 0 5 chr10 17041511 17041567 -123275198 + MLT2B3 LTR ERVL 411 554 0 2239 171 68 46 chr10 17043696 17044192 -123272573 + MER67D LTR ERV1 4 510 -4 762 172 8 0 chr10 17044309 17044437 -123272328 - FLAM_C SINE Alu -4 129 1 381 269 84 42 chr10 17044947 17045114 -123271651 - MIR SINE MIR -10 252 79 22 0 0 0 chr10 17045804 17045826 -123270939 + GC_rich Low_complexity Low_complexity 1 22 0 2256 203 8 51 chr10 17045907 17046111 -123270654 - MLT1D LTR MaLR 0 505 294 1346 112 4 116 chr10 17046111 17046209 -123270556 - MER30 DNA MER1_type -1 229 122 2201 102 0 20 chr10 17046209 17046513 -123270252 - AluSx SINE Alu -11 301 4 1346 112 4 116 chr10 17046513 17046672 -123270093 - MER30 DNA MER1_type -108 122 1 2256 203 8 51 chr10 17046672 17046995 -123269770 - MLT1D LTR MaLR -211 294 1 2273 101 3 0 chr10 17047054 17047352 -123269413 + AluSq SINE Alu 1 299 -14 24 53 0 0 chr10 17047672 17047710 -123269055 + AT_rich Low_complexity Low_complexity 1 38 0 1766 103 3 142 chr10 17048438 17048798 -123267967 - AluSg SINE Alu 0 310 1 565 258 6 53 chr10 17049385 17049594 -123267171 - MIR SINE MIR -45 217 20 478 248 72 8 chr10 17050257 17050382 -123266383 + MIR SINE MIR 117 249 -13 22 35 0 0 chr10 17050788 17050817 -123265948 + AT_rich Low_complexity Low_complexity 1 29 0 420 111 0 0 chr10 17050871 17050934 -123265831 + (TA)n Simple_repeat Simple_repeat 2 64 0 400 340 95 42 chr10 17052763 17053004 -123263761 - MIR SINE MIR 0 262 9 372 43 0 0 chr10 17053590 17053636 -123263129 + (GA)n Simple_repeat Simple_repeat 1 46 0 282 326 23 23 chr10 17053740 17053912 -123262853 + L1MCc LINE L1 1180 1351 -5072 1107 276 84 57 chr10 17054083 17054437 -123262328 + L1MCc LINE L1 1544 1887 -5235 1629 207 3 10 chr10 17054437 17054742 -123262023 + AluJo SINE Alu 3 305 -7 1107 276 84 57 chr10 17054742 17055442 -123261323 + L1MCc LINE L1 1887 2854 -4268 348 306 50 0 chr10 17055464 17055578 -123261187 - L1M4c LINE L1 -4929 1455 1333 1933 112 0 4 chr10 17055578 17055847 -123260918 - AluSc SINE Alu -19 290 23 2191 56 0 0 chr10 17056506 17056773 -123259992 + AluY SINE Alu 44 310 -1 21 0 0 0 chr10 17057586 17057607 -123259158 + AT_rich Low_complexity Low_complexity 1 21 0 223 354 9 26 chr10 17059879 17059992 -123256773 - MIR3 SINE MIR -15 193 83 1569 194 31 0 chr10 17059997 17060291 -123256474 + AluJo SINE Alu 1 303 -9 2210 121 0 0 chr10 17060808 17061105 -123255660 + AluSx SINE Alu 1 297 -15 28 48 0 0 chr10 17061154 17061196 -123255569 + AT_rich Low_complexity Low_complexity 1 42 0 1455 237 74 4 chr10 17061270 17061756 -123255009 + L1MCc LINE L1 3410 3929 -3012 1405 234 45 32 chr10 17061755 17062220 -123254545 + L1MA9 LINE L1 5801 6271 -41 * 1210 244 95 5 chr10 17062252 17062766 -123253999 + L1MCc LINE L1 3936 4544 -2397 698 190 259 62 chr10 17063047 17063352 -123253413 + MLT1A1 LTR MaLR 1 365 0 270 136 0 0 chr10 17063407 17063451 -123253314 + (CA)n Simple_repeat Simple_repeat 2 45 0 677 291 112 0 chr10 17063961 17064184 -123252581 + MIR SINE MIR 3 250 -12 369 0 0 0 chr10 17065944 17065985 -123250780 + (CA)n Simple_repeat Simple_repeat 2 42 0 193 280 0 20 chr10 17066078 17066128 -123250637 - L2 LINE L2 -1 3271 3223 270 298 124 0 chr10 17066632 17066753 -123250012 + MIR SINE MIR 57 192 -70 2030 138 0 22 chr10 17066791 17067102 -123249663 + AluSx SINE Alu 1 304 -8 337 289 85 81 chr10 17068881 17069127 -123247638 + L1MC4a LINE L1 5689 5935 -1873 268 313 31 0 chr10 17069306 17069434 -123247331 + L1ME LINE L1 5601 5732 -389 402 224 94 3 chr10 17069607 17069758 -123247007 + L1ME4a LINE L1 1187 6118 -3 2852 7 0 0 chr10 17069917 17070225 -123246540 - AluYa5 SINE Alu -3 308 1 21 0 0 0 chr10 17070228 17070249 -123246516 + AT_rich Low_complexity Low_complexity 1 21 0 1688 204 0 3 chr10 17070332 17070617 -123246148 - AluJo SINE Alu -22 290 7 208 121 0 0 chr10 17070825 17070858 -123245907 + (TG)n Simple_repeat Simple_repeat 2 34 0 1175 114 0 0 chr10 17071108 17071275 -123245490 + AluSx SINE Alu 23 189 -123 25 68 5 0 chr10 17071588 17071700 -123245065 + AT_rich Low_complexity Low_complexity 1 67 0 2249 104 0 0 chr10 17071733 17072031 -123244734 - AluY SINE Alu -13 298 1 1018 266 21 21 chr10 17072922 17073256 -123243509 + MARNA DNA Mariner 187 520 -66 231 311 67 25 chr10 17073349 17073468 -123243297 - LTR40b LTR ERVL -338 124 1 347 278 43 30 chr10 17073469 17073656 -123243109 + L1ME3A LINE L1 5695 5895 -271 588 222 70 22 chr10 17074058 17074243 -123242522 + MER3 DNA MER1_type 16 209 0 29 70 0 0 chr10 17074412 17074469 -123242296 + AT_rich Low_complexity Low_complexity 1 57 0 182 268 196 0 chr10 17074790 17074846 -123241919 - MIR SINE MIR -61 147 81 1677 255 52 43 chr10 17074975 17074996 -123241769 - MLT1F LTR MaLR 0 542 523 2160 151 11 0 chr10 17074996 17075347 -123241418 - THE1A LTR MaLR 0 355 1 1677 255 52 43 chr10 17075347 17075672 -123241093 - MLT1F LTR MaLR -19 523 187 225 0 0 0 chr10 17075672 17075697 -123241068 + (GA)n Simple_repeat Simple_repeat 2 26 0 1677 255 52 43 chr10 17075697 17075886 -123240879 - MLT1F LTR MaLR -355 187 1 183 314 67 19 chr10 17076170 17076275 -123240490 + L2 LINE L2 1325 1434 -1880 1012 115 0 0 chr10 17077709 17077848 -123238917 + AluSq/x SINE Alu 1 139 -174 373 164 0 0 chr10 17077850 17077911 -123238854 + Alu SINE Alu 234 294 -8 485 328 80 43 chr10 17077977 17078303 -123238462 + L2 LINE L2 2637 2974 -340 370 314 34 0 chr10 17078356 17078474 -123238291 + L2 LINE L2 3192 3313 0 327 330 96 75 chr10 17078684 17079204 -123237561 + L2 LINE L2 2712 3269 -3 21 0 0 0 chr10 17079419 17079440 -123237325 + AT_rich Low_complexity Low_complexity 1 21 0 234 308 0 0 chr10 17079735 17079800 -123236965 + MIR SINE MIR 83 147 -61 2458 51 3 0 chr10 17080982 17081278 -123235487 + AluY SINE Alu 1 297 -14 5245 172 14 35 chr10 17081279 17082267 -123234498 - L1MB1 LINE L1 -7 6161 5154 711 97 44 0 chr10 17082267 17082380 -123234385 + L1PA13 LINE L1 6046 6163 0 5245 172 14 35 chr10 17082380 17082447 -123234318 - L1MB1 LINE L1 -1014 5154 5087 2306 105 0 0 chr10 17082447 17082751 -123234014 - AluSq SINE Alu -1 312 9 5245 172 14 35 chr10 17082751 17083249 -123233516 - L1MB1 LINE L1 -1081 5087 4653 1223 107 34 11 chr10 17083249 17083426 -123233339 - AluSg SINE Alu -129 181 1 702 322 19 0 chr10 17083583 17083788 -123232977 + MLT1I LTR MaLR 198 406 -3 349 307 35 95 chr10 17083837 17084066 -123232699 + MIR SINE MIR 47 261 -1 458 279 31 0 chr10 17084333 17084462 -123232303 + L2 LINE L2 1491 1623 -1691 2920 204 49 25 chr10 17085017 17085653 -123231112 - MER82 DNA MER2_type -2 651 1 1903 159 130 29 chr10 17085965 17086381 -123230384 - MLT2B1 LTR ERVL -62 458 1 2913 322 73 24 chr10 17086923 17087029 -123229736 + L2 LINE L2 107 206 -3108 2481 121 0 11 chr10 17087029 17087408 -123229357 + THE1C LTR MaLR 1 375 0 2913 322 73 24 chr10 17087408 17088748 -123228017 + L2 LINE L2 206 1623 -1691 369 0 0 0 chr10 17089209 17089250 -123227515 + (TG)n Simple_repeat Simple_repeat 2 42 0 318 271 169 0 chr10 17090483 17090601 -123226164 - L2 LINE L2 -5 3308 3171 330 232 0 0 chr10 17090792 17090848 -123225917 + LTR67 LTR ERVL 113 168 -389 455 235 110 7 chr10 17090954 17091090 -123225675 + LTR67 LTR ERVL 360 509 -48 1588 172 49 0 chr10 17091526 17091793 -123224972 - AluJb SINE Alu -12 300 21 326 154 0 15 chr10 17091823 17091888 -123224877 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 5681 52 10 0 chr10 17091889 17092597 -123224168 - L1PA5 LINE L1 -11 6143 5429 3403 33 0 0 chr10 17092597 17093053 -123223712 + L1PA5 LINE L1 4976 5431 -723 901 259 37 27 chr10 17093284 17093578 -123223187 - L1MC4a LINE L1 -1917 5891 5595 2830 13 0 0 chr10 17093600 17093911 -123222854 - AluYa5 SINE Alu 0 311 1 21 0 0 0 chr10 17093914 17093935 -123222830 + AT_rich Low_complexity Low_complexity 1 21 0 1688 204 0 3 chr10 17094018 17094303 -123222462 - AluJo SINE Alu -22 290 7 208 121 0 0 chr10 17094511 17094544 -123222221 + (TG)n Simple_repeat Simple_repeat 2 34 0 1175 114 0 0 chr10 17094794 17094961 -123221804 + AluSx SINE Alu 23 189 -123 25 68 5 0 chr10 17095274 17095386 -123221379 + AT_rich Low_complexity Low_complexity 1 67 0 2249 104 0 0 chr10 17095419 17095717 -123221048 - AluY SINE Alu -13 298 1 1018 266 21 21 chr10 17096608 17096942 -123219823 + MARNA DNA Mariner 187 520 -66 231 311 67 25 chr10 17097035 17097154 -123219611 - LTR40b LTR ERVL -338 124 1 347 278 43 30 chr10 17097155 17097342 -123219423 + L1ME3A LINE L1 5695 5895 -271 588 222 70 22 chr10 17097744 17097929 -123218836 + MER3 DNA MER1_type 16 209 0 29 70 0 0 chr10 17098098 17098155 -123218610 + AT_rich Low_complexity Low_complexity 1 57 0 182 268 196 0 chr10 17098476 17098532 -123218233 - MIR SINE MIR -61 147 81 1677 255 52 43 chr10 17098661 17098682 -123218083 - MLT1F LTR MaLR 0 542 523 2160 151 11 0 chr10 17098682 17099033 -123217732 - THE1A LTR MaLR 0 355 1 1677 255 52 43 chr10 17099033 17099358 -123217407 - MLT1F LTR MaLR -19 523 187 225 0 0 0 chr10 17099358 17099383 -123217382 + (GA)n Simple_repeat Simple_repeat 2 26 0 1677 255 52 43 chr10 17099383 17099572 -123217193 - MLT1F LTR MaLR -355 187 1 183 314 67 19 chr10 17099856 17099961 -123216804 + L2 LINE L2 1325 1434 -1880 1012 115 0 0 chr10 17101476 17101615 -123215150 + AluSq/x SINE Alu 1 139 -174 373 164 0 0 chr10 17101617 17101678 -123215087 + Alu SINE Alu 234 294 -8 485 328 80 43 chr10 17101744 17102070 -123214695 + L2 LINE L2 2637 2974 -340 370 314 34 0 chr10 17102123 17102241 -123214524 + L2 LINE L2 3192 3313 0 327 330 96 75 chr10 17102451 17102971 -123213794 + L2 LINE L2 2712 3269 -3 21 0 0 0 chr10 17103186 17103207 -123213558 + AT_rich Low_complexity Low_complexity 1 21 0 234 308 0 0 chr10 17103502 17103567 -123213198 + MIR SINE MIR 83 147 -61 2458 51 3 0 chr10 17104749 17105045 -123211720 + AluY SINE Alu 1 297 -14 5245 169 15 31 chr10 17105046 17106034 -123210731 - L1MB1 LINE L1 -7 6161 5159 711 97 44 0 chr10 17106034 17106147 -123210618 + L1PA13 LINE L1 6046 6163 0 5245 169 15 31 chr10 17106147 17106214 -123210551 - L1MB1 LINE L1 -1009 5159 5092 2306 105 0 0 chr10 17106214 17106518 -123210247 - AluSq SINE Alu -1 312 9 5245 169 15 31 chr10 17106518 17107294 -123209471 - L1MB1 LINE L1 -1076 5092 4369 471 335 116 9 chr10 17107428 17107652 -123209113 - MIR SINE MIR -6 256 9 375 314 23 41 chr10 17107925 17108097 -123208668 - MIR3 SINE MIR -14 194 26 1852 137 18 36 chr10 17108277 17108612 -123208153 + L1PA16 LINE L1 5835 6163 -3 413 90 0 45 chr10 17108838 17108905 -123207860 - L1PA13 LINE L1 -11 6152 6089 1112 146 38 42 chr10 17109093 17109354 -123207411 + L1MA1 LINE L1 6031 6290 -12 32 26 0 0 chr10 17109356 17109395 -123207370 + AT_rich Low_complexity Low_complexity 1 39 0 378 0 0 0 chr10 17109500 17109542 -123207223 + (CA)n Simple_repeat Simple_repeat 1 42 0 22 56 0 0 chr10 17110506 17110542 -123206223 + AT_rich Low_complexity Low_complexity 1 36 0 570 311 109 8 chr10 17111514 17111752 -123205013 + MIR SINE MIR 1 262 0 284 250 60 17 chr10 17111983 17112099 -123204666 + L1MCc LINE L1 30 150 -6273 1219 254 82 28 chr10 17112103 17112649 -123204116 + L1MCc LINE L1 1035 1633 -4887 1453 254 75 64 chr10 17112664 17114048 -123202717 + L1MCc LINE L1 2291 3653 -3288 * 1774 245 45 21 chr10 17114042 17114671 -123202094 + L1M4 LINE L1 4724 5367 -779 432 291 80 19 chr10 17114673 17115094 -123201671 + L1ME1 LINE L1 1395 1996 -4829 929 158 0 0 chr10 17115097 17115243 -123201522 - L1PB4 LINE L1 -7 6149 6004 661 179 8 8 chr10 17115565 17115688 -123201077 + FLAM_C SINE Alu 1 123 -20 595 308 56 15 chr10 17115746 17116316 -123200449 + L1ME1 LINE L1 2462 3015 -3629 382 273 45 64 chr10 17116478 17116742 -123200023 - L1ME1 LINE L1 -2195 4449 4191 910 272 129 36 chr10 17116742 17117385 -123199380 + L1ME1 LINE L1 4450 5152 -1492 542 295 138 41 chr10 17117826 17118124 -123198641 + L1ME1 LINE L1 5771 6039 -625 1598 191 90 0 chr10 17118124 17118459 -123198306 + MER47A DNA MER2_type 2 366 0 542 295 138 41 chr10 17118459 17118719 -123198046 + L1ME1 LINE L1 6039 6383 -281 356 303 111 59 chr10 17119280 17119752 -123197013 - L2 LINE L2 -883 2431 1985 4114 114 3 5 chr10 17119752 17120373 -123196392 + L1PA14 LINE L1 5535 6154 -7 225 0 0 0 chr10 17120373 17120398 -123196367 + (CA)n Simple_repeat Simple_repeat 2 26 0 356 303 111 59 chr10 17120398 17120446 -123196319 - L2 LINE L2 -1328 1986 1883 1540 153 4 7 chr10 17120617 17120898 -123195867 + L1PA14 LINE L1 5875 6154 -7 225 0 0 0 chr10 17120898 17120923 -123195842 + (CA)n Simple_repeat Simple_repeat 2 26 0 736 143 0 0 chr10 17122086 17122191 -123194574 - AluSq/x SINE Alu -208 105 1 1711 177 0 24 chr10 17122440 17122728 -123194037 + AluJo SINE Alu 1 281 -31 314 329 63 50 chr10 17123029 17123251 -123193514 + L3 LINE CR1 1322 1546 -31 1777 238 60 7 chr10 17124024 17124252 -123192513 - MLT1D LTR MaLR 0 505 291 1667 108 67 131 chr10 17124252 17124640 -123192125 + THE1B LTR MaLR 1 363 -1 1777 238 60 7 chr10 17124640 17124827 -123191938 - MLT1D LTR MaLR -214 291 68 227 109 196 0 chr10 17124831 17124877 -123191888 + MADE1 DNA Mariner 1 55 -25 245 170 0 0 chr10 17125002 17125049 -123191716 - MADE1 DNA Mariner -33 47 1 251 257 9 24 chr10 17126800 17126978 -123189787 + GA-rich Low_complexity Low_complexity 1 175 0 429 193 8 9 chr10 17128414 17128504 -123188261 - MER58A DNA MER1_type -17 90 1 611 162 10 0 chr10 17128695 17128794 -123187971 - MER66B LTR ERV1 -7 479 380 7368 37 7 0 chr10 17128810 17129702 -123187063 - L1PA5 LINE L1 -3 6151 5254 826 208 117 10 chr10 17129706 17129903 -123186862 - MER66A LTR ERV1 -92 386 169 467 170 57 92 chr10 17129879 17130020 -123186745 - MER41A LTR ERV1 -252 302 167 * 298 121 0 69 chr10 17130837 17130895 -123185870 + MIR SINE MIR 121 174 -88 1921 176 0 0 chr10 17132338 17132650 -123184115 + AluJb SINE Alu 1 312 0 275 236 39 94 chr10 17132736 17132863 -123183902 + MER94 DNA DNA 1 120 -14 425 372 54 4 chr10 17133089 17133328 -123183437 + HAL1b LINE L1 671 921 -427 22 0 0 0 chr10 17133481 17133503 -123183262 + AT_rich Low_complexity Low_complexity 1 22 0 524 283 167 32 chr10 17133599 17133811 -123182954 + L1MC/D LINE L1 5272 5541 -2267 2891 152 22 2 chr10 17133811 17134319 -123182446 - L1MC1 LINE L1 -1 6332 5815 524 283 167 32 chr10 17134319 17134417 -123182348 + L1MC/D LINE L1 5541 5624 -2184 2041 145 0 7 chr10 17134697 17134994 -123181771 + AluJb SINE Alu 1 295 -17 187 200 22 0 chr10 17135040 17135085 -123181680 - L2 LINE L2 0 3313 3268 2148 86 0 0 chr10 17137078 17137346 -123179419 - AluSc SINE Alu -19 290 23 305 287 57 25 chr10 17137405 17137527 -123179238 - L1MEd LINE L1 -5018 1101 976 1273 217 138 40 chr10 17138043 17138448 -123178317 - MSTB2 LTR MaLR -12 445 1 310 340 44 19 chr10 17138968 17139174 -123177591 - ERVL LTR ERVL -3789 1975 1765 226 256 58 44 chr10 17139591 17139728 -123177037 - L1M4 LINE L1 -2323 3823 3685 21 82 0 0 chr10 17140233 17140282 -123176483 + AT_rich Low_complexity Low_complexity 1 49 0 702 289 69 39 chr10 17140492 17140856 -123175909 - L1MC/D LINE L1 -2012 5796 5422 1250 261 87 0 chr10 17140870 17141261 -123175504 - L1ME2 LINE L1 -13 6151 5727 652 228 54 81 chr10 17141258 17141503 -123175262 - L1ME2 LINE L1 -690 5472 5243 * 4425 23 0 0 chr10 17141503 17142020 -123174745 - L1PA3 LINE L1 -2 6153 5637 652 228 54 81 chr10 17142020 17142182 -123174583 - L1ME2 LINE L1 -919 5243 5078 413 295 16 0 chr10 17142198 17142327 -123174438 - L1ME2 LINE L1 -2065 4081 3951 226 256 12 12 chr10 17142344 17142355 -123174410 - L1MA10 LINE L1 -2 6332 6322 1951 233 70 7 chr10 17142355 17142909 -123173856 - L1ME1 LINE L1 -4 6231 5643 4587 219 47 23 chr10 17142981 17144346 -123172419 - L1ME1 LINE L1 -1814 4401 3004 2094 147 0 0 chr10 17144510 17144823 -123171942 - AluSq SINE Alu 0 313 1 445 326 74 16 chr10 17144922 17145232 -123171533 - L1ME1 LINE L1 -6034 362 35 23 0 0 0 chr10 17145333 17145356 -123171409 + AT_rich Low_complexity Low_complexity 1 23 0 31 58 0 0 chr10 17145417 17145469 -123171296 + AT_rich Low_complexity Low_complexity 1 52 0 269 192 0 68 chr10 17145689 17145762 -123171003 + (CATA)n Simple_repeat Simple_repeat 2 69 0 1064 244 109 56 chr10 17146522 17146570 -123170195 - L1MB1 LINE L1 -1 6167 6123 1807 176 0 0 chr10 17146570 17146871 -123169894 - AluJo SINE Alu -3 309 9 1064 244 109 56 chr10 17146871 17147053 -123169712 - L1MB1 LINE L1 -45 6123 5952 2334 124 13 3 chr10 17147053 17147431 -123169334 - L1PB2 LINE L1 -2 6149 5768 1064 244 109 56 chr10 17147431 17147921 -123168844 - L1MB1 LINE L1 -216 5952 5638 3464 160 9 8 chr10 17147432 17147554 -123169211 - L1PA11 LINE L1 -20 6154 6034 1559 64 0 27 chr10 17147554 17147774 -123168991 - L1PA5 LINE L1 0 6154 5941 3464 160 9 8 chr10 17147774 17148842 -123167923 - L1PA11 LINE L1 -140 6034 4720 3996 200 11 55 chr10 17148942 17149097 -123167668 - L1 LINE L1 -1828 4318 4158 5881 115 24 33 chr10 17149097 17149419 -123167346 - L1PA14 LINE L1 -4 6157 5834 2517 71 0 3 chr10 17149419 17149730 -123167035 - AluY SINE Alu -1 310 1 5881 115 24 33 chr10 17149730 17150378 -123166387 - L1PA14 LINE L1 -327 5834 5189 224 29 0 29 chr10 17150378 17150412 -123166353 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 5881 115 24 33 chr10 17150412 17150731 -123166034 - L1PA14 LINE L1 -972 5189 4869 3996 200 11 55 chr10 17150731 17151621 -123165144 - L1 LINE L1 -1988 4158 3320 255 93 0 0 chr10 17151853 17151896 -123164869 + (T)n Simple_repeat Simple_repeat 1 43 0 7313 39 2 0 chr10 17152454 17153726 -123163039 + L1PA4 LINE L1 4874 6147 -8 581 178 25 0 chr10 17153770 17153888 -123162877 - MSTD LTR MaLR 0 396 276 570 236 54 49 chr10 17154077 17154397 -123162368 - MSTC LTR MaLR -41 324 1 1278 142 5 19 chr10 17154442 17154653 -123162112 - AluSg/x SINE Alu -24 288 81 4161 94 14 2 chr10 17154658 17155245 -123161520 - L1PA10 LINE L1 0 6168 5575 1166 157 0 0 chr10 17155281 17155459 -123161306 + AluSg/x SINE Alu 132 309 -1 283 349 48 18 chr10 17155484 17155650 -123161115 - MLT1J2 LTR MaLR -39 411 241 281 233 0 0 chr10 17155711 17155771 -123160994 - MLT1I LTR MaLR -257 152 93 287 262 79 43 chr10 17156161 17156325 -123160440 + MLT1L LTR MaLR 433 602 -13 3022 93 7 2 chr10 17156349 17156778 -123159987 + L1PA10 LINE L1 5717 6147 -21 180 0 0 0 chr10 17156778 17156798 -123159967 + (TTAAA)n Simple_repeat Simple_repeat 1 20 0 2366 93 0 0 chr10 17156904 17157206 -123159559 - AluSg SINE Alu -8 302 1 805 190 5 5 chr10 17158100 17158305 -123158460 - L1 LINE L1 -1647 4499 4295 1726 135 0 43 chr10 17158308 17158633 -123158132 - L1MB1 LINE L1 -198 5970 5660 256 393 34 0 chr10 17159032 17159149 -123157616 - L2 LINE L2 -1 3271 3151 1254 136 54 54 chr10 17159192 17159471 -123157294 + Tigger2a DNA MER2_type 1 279 -155 1943 161 65 13 chr10 17159476 17159927 -123156838 - L1M3 LINE L1 -495 5673 5197 929 196 27 9 chr10 17159943 17160168 -123156597 - L1M3 LINE L1 -1756 4390 4162 2085 133 0 0 chr10 17160170 17160487 -123156278 - L1PA14 LINE L1 -4 6157 5841 2725 42 0 0 chr10 17160492 17160803 -123155962 - AluY SINE Alu 0 311 1 422 295 16 0 chr10 17160962 17161084 -123155681 + MLT1I LTR MaLR 67 190 -219 879 200 0 0 chr10 17161466 17161626 -123155139 - L1PB4 LINE L1 -5 6151 5992 2094 135 0 0 chr10 17162637 17162926 -123153839 - AluSx SINE Alu -22 290 2 1514 304 70 34 chr10 17162959 17163978 -123152787 - L1M3a LINE L1 -4917 1038 302 1348 290 20 26 chr10 17164092 17164547 -123152218 - L1M3a LINE L1 -5503 452 1 3504 73 0 0 chr10 17164720 17165187 -123151578 - Harlequin LTR ERV1 -5730 2896 2430 * 3672 68 0 0 chr10 17165172 17165644 -123151121 - Harlequin LTR ERV1 -6612 2014 1543 3416 99 23 5 chr10 17165663 17166016 -123150749 - Harlequin LTR ERV1 -5087 1809 1464 315 0 0 0 chr10 17166016 17166051 -123150714 + (TG)n Simple_repeat Simple_repeat 2 36 0 3416 99 23 5 chr10 17166051 17166448 -123150317 - Harlequin LTR ERV1 -5432 1464 1001 1758 98 167 164 chr10 17166456 17167194 -123149571 + LTR12 LTR ERV1 57 560 -154 1947 169 156 30 chr10 17168055 17168580 -123148185 - LTR49 LTR ERV1 -4 591 1 793 160 12 59 chr10 17168947 17169081 -123147684 - MER4E LTR ERV1 -7 772 646 3138 124 28 57 chr10 17169081 17169644 -123147121 + LTR10B LTR ERV1 1 547 0 793 160 12 59 chr10 17169644 17169678 -123147087 - MER4E LTR ERV1 -133 646 612 666 165 0 0 chr10 17169678 17169781 -123146984 - AluSq/x SINE Alu -210 103 1 338 165 8 75 chr10 17170309 17170436 -123146329 - MER41B LTR ERV1 -9 597 401 1644 112 0 9 chr10 17170437 17170567 -123146198 + AluSq SINE Alu 1 130 -183 227 31 31 0 chr10 17170567 17170599 -123146166 + (TA)n Simple_repeat Simple_repeat 2 34 0 1644 112 0 9 chr10 17170599 17170692 -123146073 + AluSq SINE Alu 130 222 -91 3960 52 12 0 chr10 17170692 17171176 -123145589 + LTR2B LTR ERV1 1 490 0 520 139 0 0 chr10 17171176 17171248 -123145517 + AluSq SINE Alu 219 290 -23 22 0 0 0 chr10 17171248 17171270 -123145495 + AT_rich Low_complexity Low_complexity 1 22 0 622 200 73 33 chr10 17171270 17171445 -123145320 + FAM SINE Alu 1 45 0 1962 192 2 35 chr10 17171452 17171880 -123144885 - MER41B LTR ERV1 -108 527 114 21 0 0 0 chr10 17171898 17171919 -123144846 + AT_rich Low_complexity Low_complexity 1 21 0 268 270 16 0 chr10 17172310 17172373 -123144392 + L2 LINE L2 3186 3249 -23 2372 102 10 0 chr10 17172503 17172808 -123143957 + AluSc SINE Alu 1 308 -1 226 83 0 62 chr10 17173792 17173840 -123142925 + (CATATA)n Simple_repeat Simple_repeat 3 47 0 28 61 0 0 chr10 17173942 17173991 -123142774 + AT_rich Low_complexity Low_complexity 1 49 0 13848 152 34 17 chr10 17174110 17177599 -123139166 - L1MA2 LINE L1 -4 7719 4123 1594 221 14 0 chr10 17177599 17177888 -123138877 + AluJb SINE Alu 1 293 -19 13848 152 34 17 chr10 17177888 17179025 -123137740 - L1MA2 LINE L1 -3600 4123 3007 5007 127 34 42 chr10 17179052 17180123 -123136642 - L1PB1 LINE L1 -2 6149 5090 * 13107 158 138 4 chr10 17180110 17180123 -123136642 - L1MA2 LINE L1 -4532 3033 3023 835 85 0 0 chr10 17180123 17180229 -123136536 - U6 snRNA snRNA 0 107 2 13107 158 138 4 chr10 17180229 17182871 -123133894 - L1MA2 LINE L1 -4542 3023 23 2039 154 3 0 chr10 17183060 17183371 -123133394 + AluSx SINE Alu 1 312 0 370 204 61 0 chr10 17183671 17183769 -123132996 - MER97a DNA MER1_type? -717 177 74 1582 204 0 7 chr10 17184164 17184448 -123132317 + AluJb SINE Alu 1 282 -30 263 313 125 32 chr10 17184940 17185221 -123131544 + MLT1J LTR MaLR 124 430 -81 569 211 58 53 chr10 17185463 17185671 -123131094 - MER3 DNA MER1_type 0 209 1 323 311 72 5 chr10 17185691 17185884 -123130881 - L1ME LINE L1 -516 5637 5432 496 308 46 23 chr10 17185987 17186426 -123130339 - L1ME LINE L1 -1095 5034 4586 983 201 75 61 chr10 17186472 17186895 -123129870 + MLT1D LTR MaLR 44 505 0 3922 240 20 54 chr10 17186896 17188129 -123128636 + MLT1D-int LTR MaLR 2 1192 -179 226 229 0 0 chr10 17188127 17188175 -123128590 - MLT1-int LTR MaLR -668 703 656 * 269 152 0 0 chr10 17188182 17188228 -123128537 + MLT1D-int LTR MaLR 1187 1232 -139 2183 121 7 0 chr10 17188229 17188526 -123128239 - AluSx SINE Alu -9 303 5 11781 45 7 0 chr10 17188583 17190818 -123125947 - L1PA5 LINE L1 -13 6141 3899 9740 44 1 2 chr10 17190819 17192109 -123124656 + L1PA5 LINE L1 2594 3881 -2265 435 219 41 0 chr10 17192128 17192251 -123124514 + MLT1D-int LTR MaLR 1237 1364 -7 1040 246 111 35 chr10 17192258 17192710 -123124055 + MLT1D LTR MaLR 1 486 -19 647 319 129 18 chr10 17192730 17193294 -123123471 - L1ME LINE L1 -1549 4580 3954 337 258 47 30 chr10 17193394 17193650 -123123115 - L1MEc LINE L1 -4865 1290 993 315 281 9 83 chr10 17193746 17193905 -123122860 - L1M4 LINE L1 -2913 3233 3094 2239 102 10 19 chr10 17193905 17194219 -123122546 - AluY SINE Alu 0 311 1 315 281 9 83 chr10 17194219 17194287 -123122478 - L1M4 LINE L1 -3052 3094 3023 23 33 0 0 chr10 17194389 17194419 -123122346 + AT_rich Low_complexity Low_complexity 1 30 0 2579 126 30 0 chr10 17194463 17194868 -123121897 - L1PA10 LINE L1 -18 6150 5734 4284 78 23 11 chr10 17194868 17195883 -123120882 - MER11A LTR ERVK -1 1265 1 2454 107 77 5 chr10 17195883 17196587 -123120178 - L1PA10 LINE L1 -391 5740 4879 1609 223 0 3 chr10 17197203 17197504 -123119261 - AluJo SINE Alu -12 300 1 252 330 96 59 chr10 17197643 17198206 -123118559 - L1MEc LINE L1 -5487 632 49 2268 113 0 0 chr10 17198249 17198550 -123118215 - AluSx SINE Alu -11 301 1 226 270 68 27 chr10 17198575 17198723 -123118042 - L1MC/D LINE L1 -1894 5914 5761 3754 148 19 28 chr10 17199007 17199103 -123117662 - L1MA7 LINE L1 -9 6282 6187 2114 117 0 37 chr10 17199103 17199427 -123117338 + AluSq SINE Alu 1 312 -1 3754 148 19 28 chr10 17199427 17199695 -123117070 - L1MA7 LINE L1 -104 6187 5918 2157 177 78 0 chr10 17199695 17200090 -123116675 + MSTB LTR MaLR 1 426 0 3754 148 19 28 chr10 17200090 17200445 -123116320 - L1MA7 LINE L1 -373 5918 5568 403 285 119 55 chr10 17200462 17200600 -123116165 - L1MC/D LINE L1 -369 5752 5624 1760 97 0 0 chr10 17200600 17200827 -123115938 + AluSg/x SINE Alu 84 310 -2 403 285 119 55 chr10 17200827 17201109 -123115656 - L1MC/D LINE L1 -497 5624 5305 2100 120 10 3 chr10 17201774 17202074 -123114691 - AluSc SINE Alu -7 302 1 355 301 81 40 chr10 17202399 17202572 -123114193 - MER5A DNA MER1_type -3 186 7 529 253 26 52 chr10 17202602 17202796 -123113969 + MER5A DNA MER1_type 1 189 0 306 375 44 7 chr10 17202803 17202939 -123113826 + MIR3 SINE MIR 37 177 -31 2468 80 0 0 chr10 17203096 17203395 -123113370 - AluSg SINE Alu -11 299 1 403 323 117 9 chr10 17206183 17206406 -123110359 + MIR SINE MIR 2 248 -14 367 191 227 9 chr10 17206988 17207098 -123109667 - L2 LINE L2 -2 3311 3178 383 308 42 28 chr10 17207305 17207519 -123109246 + HERV16 LTR ERVL 3472 3688 -1308 633 351 40 23 chr10 17207733 17207939 -123108826 + HERV16 LTR ERVL 4482 4683 -971 1823 146 40 45 chr10 17207939 17208316 -123108449 - THE1C LTR MaLR 0 375 1 633 351 40 23 chr10 17208316 17208631 -123108134 + HERV16 LTR ERVL 4683 5012 -642 308 256 84 23 chr10 17208665 17208842 -123107923 + L1M4 LINE L1 2331 2564 -3902 2852 233 58 57 chr10 17209419 17210903 -123105862 + L1M4 LINE L1 4066 5550 -832 2541 269 54 20 chr10 17210922 17211831 -123104934 + L1MEc LINE L1 37 976 -5420 374 289 103 0 chr10 17211835 17211991 -123104774 + L1M4c LINE L1 3518 3689 -2693 246 244 118 14 chr10 17212012 17212134 -123104631 + MIR SINE MIR 24 226 -36 1608 133 29 65 chr10 17212136 17212248 -123104517 + AluJb SINE Alu 1 115 -197 2050 125 47 33 chr10 17212248 17212607 -123104158 + THE1B LTR MaLR 1 364 0 1608 133 29 65 chr10 17212607 17212827 -123103938 + AluJb SINE Alu 115 312 0 21 71 0 0 chr10 17213081 17213123 -123103642 + AT_rich Low_complexity Low_complexity 1 42 0 733 287 75 35 chr10 17213323 17213839 -123102926 + HAL1b LINE L1 282 743 -605 23 0 0 0 chr10 17213888 17213911 -123102854 + AT_rich Low_complexity Low_complexity 1 23 0 299 146 0 0 chr10 17214112 17214160 -123102605 - MLT2B1 LTR ERVL 0 397 350 2222 95 0 17 chr10 17214191 17214487 -123102278 + AluY SINE Alu 1 291 -20 191 36 36 0 chr10 17214487 17214515 -123102250 + (TA)n Simple_repeat Simple_repeat 2 30 0 848 272 110 35 chr10 17214534 17214987 -123101778 - MLT2B1 LTR ERVL -20 462 1 1596 285 41 10 chr10 17214987 17215503 -123101262 + L1ME2 LINE L1 28 559 -5486 2057 132 44 22 chr10 17215555 17215900 -123100865 + MLT1B LTR MaLR 18 373 -17 1320 224 128 14 chr10 17215900 17216253 -123100512 - MSTD LTR MaLR 0 396 4 2057 132 44 22 chr10 17216253 17216271 -123100494 + MLT1B LTR MaLR 373 389 -1 228 111 0 0 chr10 17216278 17216314 -123100451 + (CAA)n Simple_repeat Simple_repeat 1 36 0 2026 239 138 26 chr10 17216319 17216728 -123100037 + L1ME2 LINE L1 577 939 -5625 2024 119 20 3 chr10 17216728 17217022 -123099743 + AluSx SINE Alu 11 309 -3 2026 239 138 26 chr10 17217022 17218472 -123098293 + L1ME2 LINE L1 939 2225 -4339 1797 130 105 0 chr10 17218472 17218748 -123098017 - AluSq SINE Alu -8 305 1 2026 239 138 26 chr10 17218748 17219713 -123097052 + L1ME2 LINE L1 2225 3860 -2704 * 5103 172 33 18 chr10 17219710 17221742 -123095023 + L1PA16 LINE L1 4103 6161 -5 4024 223 36 50 chr10 17221818 17221994 -123094771 + L1ME2 LINE L1 3938 4115 -2449 1822 134 43 33 chr10 17221994 17222293 -123094472 + AluJo SINE Alu 1 302 -10 4865 171 20 39 chr10 17222293 17223279 -123093486 + LTR5 LTR ERVK 2 969 0 4024 223 36 50 chr10 17223279 17223777 -123092988 + L1ME2 LINE L1 4114 4617 -1947 612 254 0 0 chr10 17223777 17223907 -123092858 + FLAM_A SINE Alu 1 130 -3 4024 223 36 50 chr10 17223907 17224628 -123092137 + L1ME2 LINE L1 4617 5316 -1248 1129 240 62 22 chr10 17224624 17224982 -123091783 + L1ME2 LINE L1 6119 6490 -92 * 1180 226 0 0 chr10 17224982 17225248 -123091517 + L1PA15 LINE L1 4124 4389 -1757 294 196 0 0 chr10 17225247 17225303 -123091462 + L1PA16 LINE L1 6031 6086 -80 * 4985 139 15 24 chr10 17225311 17226249 -123090516 + L1PA15 LINE L1 4397 5323 -842 2389 57 0 0 chr10 17226249 17226553 -123090212 + AluY SINE Alu 1 304 0 4985 139 15 24 chr10 17226553 17227388 -123089377 + L1PA15 LINE L1 5323 6164 -1 491 167 0 0 chr10 17227393 17227477 -123089288 + L1ME2 LINE L1 6486 6569 -13 317 304 140 27 chr10 17227649 17227879 -123088886 - MIR SINE MIR -3 259 7 2199 112 0 10 chr10 17228229 17228542 -123088223 + AluSg SINE Alu 1 310 0 1438 218 0 24 chr10 17229767 17230061 -123086704 + AluJo SINE Alu 3 289 -23 312 106 0 0 chr10 17230070 17230117 -123086648 - Charlie5 DNA MER1_type -2521 91 45 206 288 0 0 chr10 17230416 17230475 -123086290 + CT-rich Low_complexity Low_complexity 2 60 0 195 69 0 0 chr10 17231692 17231721 -123085044 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 646 115 10 0 chr10 17231721 17231817 -123084948 - AluJ SINE Alu -33 279 183 762 162 0 0 chr10 17231833 17231950 -123084815 - AluJ SINE Alu -191 121 5 345 323 64 86 chr10 17232079 17232590 -123084175 + L2 LINE L2 2727 3221 -51 378 189 28 0 chr10 17232648 17232754 -123084011 + GA-rich Low_complexity Low_complexity 4 112 0 203 233 0 23 chr10 17232855 17232898 -123083867 + polypurine Low_complexity Low_complexity 4 45 0 820 169 3 20 chr10 17232898 17233245 -123083520 + GA-rich Low_complexity Low_complexity 1 340 0 29 0 0 0 chr10 17234239 17234268 -123082497 + AT_rich Low_complexity Low_complexity 1 29 0 216 0 0 0 chr10 17234891 17234915 -123081850 + (TA)n Simple_repeat Simple_repeat 2 25 0 658 287 39 4 chr10 17235542 17235800 -123080965 - MER102a DNA MER1_type -10 320 54 186 300 140 20 chr10 17235871 17235971 -123080794 - MIR3 SINE MIR -46 162 51 517 296 75 40 chr10 17235995 17236194 -123080571 + MIR SINE MIR 44 249 -13 3540 132 3 19 chr10 17236323 17236578 -123080187 + L1PA13 LINE L1 5578 5835 -328 2265 110 0 0 chr10 17236578 17236870 -123079895 + AluSg SINE Alu 1 292 -18 3540 132 3 19 chr10 17236870 17237205 -123079560 + L1PA13 LINE L1 5835 6159 -4 21 0 0 0 chr10 17237245 17237266 -123079499 + AT_rich Low_complexity Low_complexity 1 21 0 195 42 0 0 chr10 17237658 17237682 -123079083 + (A)n Simple_repeat Simple_repeat 1 24 0 446 194 130 28 chr10 17239224 17239332 -123077433 + FLAM_C SINE Alu 5 123 -20 420 148 139 30 chr10 17239342 17239443 -123077322 + FLAM_C SINE Alu 16 127 -16 1701 247 67 15 chr10 17239650 17239911 -123076854 - MLT1D LTR MaLR 0 505 259 1939 157 7 7 chr10 17239911 17240217 -123076548 - AluSx SINE Alu -6 306 1 1701 247 67 15 chr10 17240217 17240433 -123076332 - MLT1D LTR MaLR -246 259 3 3121 117 32 2 chr10 17240839 17241334 -123075431 - L1PA16 LINE L1 -11 6155 5646 1280 210 118 13 chr10 17241335 17241843 -123074922 - L1M4 LINE L1 -734 5440 4892 1840 160 0 3 chr10 17241845 17242127 -123074638 + AluSx SINE Alu 2 282 -30 354 324 88 12 chr10 17242585 17242755 -123074010 - MIR SINE MIR -72 190 8 207 226 130 61 chr10 17245309 17245424 -123071341 - L2 LINE L2 -1 3312 3190 746 261 32 110 chr10 17245639 17245892 -123070873 - L2 LINE L2 -9 3304 3088 2039 129 0 11 chr10 17245892 17246179 -123070586 + AluSx SINE Alu 1 284 -28 746 261 32 110 chr10 17246179 17246297 -123070468 - L2 LINE L2 -225 3088 2962 21 0 0 0 chr10 17246365 17246386 -123070379 + AT_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr10 17246441 17246479 -123070286 + AT_rich Low_complexity Low_complexity 1 38 0 320 366 113 17 chr10 17247327 17247610 -123069155 - L2 LINE L2 -261 3011 2690 1566 227 47 20 chr10 17248006 17248456 -123068309 - LTR40b LTR ERVL 0 462 1 252 309 53 0 chr10 17248460 17248554 -123068211 + MIR SINE MIR 77 175 -87 211 321 107 0 chr10 17248949 17249033 -123067732 + MIR SINE MIR 167 259 -3 1900 154 90 29 chr10 17249472 17249815 -123066950 - THE1B LTR MaLR 0 364 1 573 278 73 19 chr10 17251343 17251548 -123065217 + MIR SINE MIR 17 232 -30 1887 171 0 3 chr10 17251596 17251906 -123064859 + AluJo SINE Alu 1 309 -3 31 26 0 0 chr10 17251951 17251989 -123064776 + AT_rich Low_complexity Low_complexity 1 38 0 1580 170 10 20 chr10 17253979 17254273 -123062492 + AluJo SINE Alu 9 299 -13 245 286 41 129 chr10 17254656 17254714 -123062051 + L2 LINE L2 3137 3199 -73 2103 137 3 10 chr10 17254714 17255028 -123061737 + AluSx SINE Alu 1 312 0 245 286 41 129 chr10 17255028 17255116 -123061649 + L2 LINE L2 3199 3270 -2 2668 111 19 5 chr10 17255158 17255528 -123061237 + THE1C LTR MaLR 1 375 0 1630 162 25 14 chr10 17255678 17255962 -123060803 + AluJo SINE Alu 1 287 -25 183 296 96 48 chr10 17256010 17256135 -123060630 - MIR3 SINE MIR -65 143 13 1852 179 0 0 chr10 17257516 17257828 -123058937 - AluJb SINE Alu 0 312 1 4431 195 48 6 chr10 17258300 17258357 -123058408 + L1MB8 LINE L1 4959 5012 -1166 2375 129 33 33 chr10 17258357 17258721 -123058044 - THE1B LTR MaLR 0 364 1 4431 195 48 6 chr10 17258721 17259837 -123056928 + L1MB8 LINE L1 5012 6178 0 262 301 50 96 chr10 17259839 17260141 -123056624 - L2 LINE L2 -1317 1997 1710 651 200 0 0 chr10 17260177 17260282 -123056483 + FLAM_C SINE Alu 2 106 -37 186 368 47 47 chr10 17260320 17260491 -123056274 - L2 LINE L2 -2010 1304 1134 772 165 0 24 chr10 17260657 17260784 -123055981 - FLAM_C SINE Alu -6 137 14 260 346 108 42 chr10 17260822 17261183 -123055582 - L2 LINE L2 -2375 939 555 355 353 16 8 chr10 17261747 17261869 -123054896 + L2 LINE L2 3191 3313 0 310 266 53 18 chr10 17262206 17262319 -123054446 + MER103 DNA DNA 5 121 -45 2069 136 0 7 chr10 17262364 17262666 -123054099 - AluSx SINE Alu -12 300 1 630 267 0 0 chr10 17263805 17263936 -123052829 - FLAM_A SINE Alu 0 133 3 400 250 54 9 chr10 17263940 17264052 -123052713 + L2 LINE L2 3196 3312 -1 441 237 108 22 chr10 17264107 17264246 -123052519 - MIR SINE MIR -92 170 20 570 220 55 3 chr10 17264251 17264666 -123052099 - MER20B DNA MER1_type -8 775 285 787 150 0 17 chr10 17264696 17264816 -123051949 - FLAM_C SINE Alu -15 118 1 1698 166 32 21 chr10 17264996 17265428 -123051337 - L1MA4A LINE L1 -23 6280 5783 209 238 0 0 chr10 17265429 17265471 -123051294 + (TA)n Simple_repeat Simple_repeat 1 42 0 307 315 0 0 chr10 17265472 17265561 -123051204 - L1MC4 LINE L1 -1339 6703 6615 213 39 0 0 chr10 17265561 17265587 -123051178 + (CA)n Simple_repeat Simple_repeat 1 26 0 1426 134 84 8 chr10 17265587 17265848 -123050917 - L1M1 LINE L1 -514 5789 5509 323 155 0 17 chr10 17266681 17266739 -123050026 + MIR3 SINE MIR 149 205 -3 1864 161 3 20 chr10 17267024 17267159 -123049606 + AluJb SINE Alu 1 137 -175 2101 90 43 0 chr10 17267159 17267437 -123049328 + AluSc SINE Alu 1 290 -19 651 26 0 0 chr10 17267438 17267515 -123049250 + (TA)n Simple_repeat Simple_repeat 1 77 0 1864 161 3 20 chr10 17267515 17267676 -123049089 + AluJb SINE Alu 136 294 -18 738 170 0 0 chr10 17269317 17269423 -123047342 + FLAM_C SINE Alu 13 118 -25 823 193 23 12 chr10 17269433 17269819 -123046946 + GA-rich Low_complexity Low_complexity 1 390 0 2030 156 38 38 chr10 17270672 17271045 -123045720 - THE1C LTR MaLR 0 375 3 792 196 0 0 chr10 17271073 17271206 -123045559 + AluJo SINE Alu 3 135 -177 244 259 165 0 chr10 17272210 17272295 -123044470 - L1ME LINE L1 -530 5640 5542 7006 126 60 37 chr10 17272315 17273433 -123043332 - Tigger3b DNA MER2_type -1797 1231 82 2194 110 10 3 chr10 17273433 17273734 -123043031 - AluSq SINE Alu -10 303 1 7006 126 60 37 chr10 17273734 17273818 -123042947 - Tigger3b DNA MER2_type -2946 82 1 224 250 12 12 chr10 17274081 17274165 -123042600 + (TA)n Simple_repeat Simple_repeat 1 84 0 2449 78 10 0 chr10 17274624 17274931 -123041834 + AluY SINE Alu 1 310 -1 2073 139 10 0 chr10 17274964 17275273 -123041492 + AluSx SINE Alu 1 312 0 205 300 108 17 chr10 17275628 17275748 -123041017 - L2 LINE L2 -799 2515 2385 2002 108 66 10 chr10 17276521 17276809 -123039956 + AluSq SINE Alu 1 304 -9 1740 139 15 0 chr10 17277343 17277609 -123039156 + Tigger5 DNA MER2_type 2052 2321 -2 7132 78 23 0 chr10 17278669 17279762 -123037003 - L1PA7 LINE L1 -7 6147 5049 4773 87 0 0 chr10 17279762 17280406 -123036359 + L1PA7 LINE L1 4419 5062 -1084 1786 177 0 16 chr10 17280659 17280969 -123035796 + AluJb SINE Alu 1 305 -7 454 196 20 10 chr10 17281469 17281571 -123035194 - L1MC4 LINE L1 -18 8024 7922 2308 119 0 0 chr10 17281690 17281993 -123034772 + AluSx SINE Alu 1 303 -9 216 0 0 0 chr10 17282314 17282338 -123034427 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 314 307 88 76 chr10 17282338 17282748 -123034017 - L2 LINE L2 -13 3300 2886 1548 218 40 25 chr10 17282769 17283352 -123033413 + L1MEc LINE L1 2058 2606 -3609 579 158 219 0 chr10 17283370 17283484 -123033281 - FLAM_C SINE Alu -4 139 1 697 231 17 0 chr10 17283497 17283670 -123033095 + L1MEc LINE L1 2614 2789 -3426 2346 189 42 0 chr10 17284019 17284427 -123032338 - MSTB1 LTR MaLR 0 432 8 474 187 24 65 chr10 17284565 17284640 -123032125 + MER53 DNA DNA 1 71 -118 1778 107 9 0 chr10 17284640 17284873 -123031892 - AluSx SINE Alu -22 290 56 474 187 24 65 chr10 17284873 17284920 -123031845 + MER53 DNA DNA 71 118 -71 180 393 0 12 chr10 17285074 17285158 -123031607 - L3 LINE CR1 -44 1533 1451 539 364 22 29 chr10 17285842 17286158 -123030607 - L3b LINE CR1 -125 1458 1145 226 211 0 0 chr10 17287000 17287052 -123029713 + L1MC4 LINE L1 6652 6703 -1339 2371 68 0 10 chr10 17287065 17287357 -123029408 - AluY SINE Alu -22 289 1 1725 163 0 30 chr10 17287362 17287662 -123029103 - AluJo SINE Alu -21 291 1 2178 221 29 5 chr10 17287919 17288362 -123028403 + MER82 DNA MER2_type 200 653 0 233 221 147 0 chr10 17288362 17288430 -123028335 - MIR SINE MIR -111 151 74 2097 99 0 38 chr10 17288504 17288796 -123027969 + AluSg SINE Alu 14 294 -16 226 239 113 0 chr10 17289098 17289169 -123027596 + MIR SINE MIR 120 198 -64 1766 157 29 0 chr10 17289913 17290194 -123026571 + AluSx SINE Alu 3 291 -21 232 304 152 19 chr10 17290251 17290366 -123026399 + MIR SINE MIR 10 153 -109 1731 163 3 52 chr10 17290366 17290691 -123026074 + AluJo SINE Alu 1 309 -3 232 304 152 19 chr10 17290691 17290733 -123026032 + MIR SINE MIR 153 188 -74 289 207 69 0 chr10 17290854 17290912 -123025853 - L2 LINE L2 -2 3270 3209 189 0 0 0 chr10 17290936 17290957 -123025808 + (TG)n Simple_repeat Simple_repeat 2 22 0 784 189 0 0 chr10 17291205 17291327 -123025438 + FLAM_C SINE Alu 3 124 -19 208 253 58 69 chr10 17291911 17291998 -123024767 - L3b LINE CR1 -69 1514 1429 192 77 0 0 chr10 17292973 17292999 -123023766 + (TTA)n Simple_repeat Simple_repeat 2 27 0 876 129 0 0 chr10 17293005 17293121 -123023644 - FLAM_C SINE Alu -27 116 1 2169 122 16 0 chr10 17293360 17293708 -123023057 + AluSx SINE Alu 1 353 0 2032 178 53 61 chr10 17293915 17294095 -123022670 + MLT1D LTR MaLR 3 183 -322 2080 132 58 37 chr10 17294095 17294443 -123022322 + THE1A LTR MaLR 1 355 0 2032 178 53 61 chr10 17294443 17294668 -123022097 + MLT1D LTR MaLR 183 406 -99 1630 172 13 36 chr10 17294668 17294976 -123021789 - AluJo SINE Alu -11 301 1 2032 178 53 61 chr10 17294976 17295076 -123021689 + MLT1D LTR MaLR 406 505 0 1289 264 43 26 chr10 17295410 17295827 -123020938 - LTR33 LTR ERVL -84 437 14 491 111 0 14 chr10 17296100 17296172 -123020593 - THE1B LTR MaLR -2 362 292 2172 115 6 16 chr10 17296172 17296577 -123020188 + AluSg SINE Alu 1 402 0 2005 114 44 13 chr10 17296577 17296875 -123019890 - THE1B LTR MaLR -57 307 1 586 317 30 54 chr10 17298026 17298050 -123018715 + MLT1I LTR MaLR 5 28 -381 2013 129 10 7 chr10 17298050 17298344 -123018421 - AluSx SINE Alu -17 295 1 586 317 30 54 chr10 17298344 17298650 -123018115 + MLT1I LTR MaLR 28 327 -82 206 364 48 61 chr10 17298911 17298983 -123017782 + MIR SINE MIR 1 72 -190 1818 165 13 7 chr10 17298983 17299286 -123017479 + AluJo SINE Alu 1 305 -7 206 364 48 61 chr10 17299286 17299441 -123017324 + MIR SINE MIR 72 225 -37 464 157 11 45 chr10 17299624 17299713 -123017052 + MER58B DNA MER1_type 255 340 -1 318 353 39 13 chr10 17299985 17300138 -123016627 - L2 LINE L2 -4 3268 3112 285 396 28 39 chr10 17300771 17300918 -123015847 - L2 LINE L2 -362 2952 2805 2303 178 33 21 chr10 17300918 17301345 -123015420 - MSTB1 LTR MaLR 0 432 1 285 396 28 39 chr10 17301345 17301558 -123015207 - L2 LINE L2 -509 2805 2596 1420 196 6 92 chr10 17301564 17301890 -123014875 + AluJo SINE Alu 2 299 -3 247 224 10 20 chr10 17301910 17302008 -123014757 + GA-rich Low_complexity Low_complexity 1 97 0 287 259 142 14 chr10 17302108 17302329 -123014436 - MER5C DNA MER1_type -1 323 2 244 275 108 33 chr10 17302331 17302451 -123014314 - L2 LINE L2 -847 2467 2339 2177 202 77 0 chr10 17303009 17303410 -123013355 + MSTB1 LTR MaLR 1 432 0 1319 269 126 44 chr10 17303802 17304392 -123012373 - L2 LINE L2 -11 3302 2625 1623 188 0 14 chr10 17304392 17304685 -123012080 - AluJo SINE Alu -23 289 1 1319 269 126 44 chr10 17304685 17304975 -123011790 - L2 LINE L2 -688 2625 2360 207 278 37 0 chr10 17305004 17305058 -123011707 + L2 LINE L2 3228 3283 -30 1456 158 4 51 chr10 17305074 17305328 -123011437 + AluJo SINE Alu 43 284 -28 1696 178 3 17 chr10 17305905 17306197 -123010568 + AluJo SINE Alu 1 288 -24 1953 148 13 10 chr10 17307303 17307608 -123009157 + AluSx SINE Alu 1 306 -6 432 243 181 11 chr10 17307892 17308069 -123008696 - L2 LINE L2 -2 3311 3105 3348 187 43 88 chr10 17308090 17308234 -123008531 - L1 LINE L1 -2108 4038 3889 2180 66 52 7 chr10 17308234 17308521 -123008244 + AluY SINE Alu 1 300 -11 3348 187 43 88 chr10 17308521 17309083 -123007682 - L1 LINE L1 -2257 3889 3391 1671 160 34 20 chr10 17309083 17309376 -123007389 - AluJo SINE Alu -13 299 3 3348 187 43 88 chr10 17309376 17309698 -123007067 - L1 LINE L1 -2755 3391 3056 * 4621 153 109 68 chr10 17309696 17310807 -123005958 + L1MA9 LINE L1 4552 5616 -696 1377 184 59 26 chr10 17310807 17311105 -123005660 + AluJb SINE Alu 1 307 0 4621 153 109 68 chr10 17311105 17311331 -123005434 + L1MA9 LINE L1 5616 5831 -481 2281 117 3 0 chr10 17311331 17311639 -123005126 - AluSx SINE Alu -3 309 1 4621 153 109 68 chr10 17311639 17311964 -123004801 + L1MA9 LINE L1 5831 6273 -39 666 286 47 54 chr10 17311971 17312415 -123004350 - L1ME4a LINE L1 -47 6074 5634 278 299 9 37 chr10 17312440 17312547 -123004218 + MIR SINE MIR 20 123 -139 26 0 0 0 chr10 17312611 17312637 -123004128 + AT_rich Low_complexity Low_complexity 1 26 0 2306 133 25 33 chr10 17313523 17313890 -123002875 - THE1B LTR MaLR 0 364 1 281 301 141 64 chr10 17314121 17314277 -123002488 + L2 LINE L2 3105 3272 0 1778 181 3 3 chr10 17314367 17314670 -123002095 + AluJo SINE Alu 1 303 -9 2851 16 0 0 chr10 17315603 17315914 -123000851 - AluYa5 SINE Alu 0 311 1 1592 173 14 7 chr10 17316180 17316464 -123000301 - AluJo SINE Alu 0 312 27 2149 114 30 0 chr10 17316730 17317029 -122999736 - AluSq SINE Alu -5 308 1 267 314 115 26 chr10 17317089 17317245 -122999520 + MIR SINE MIR 29 198 -64 1631 193 3 10 chr10 17317479 17317774 -122998991 - AluJo SINE Alu -19 293 1 847 158 16 0 chr10 17318034 17318161 -122998604 - FLAM_C SINE Alu -4 129 1 519 250 67 0 chr10 17319393 17319573 -122997192 + L1ME LINE L1 4458 4649 -1497 * 878 229 80 53 chr10 17319569 17319743 -122997022 + L1ME LINE L1 5424 5592 -578 1642 197 71 71 chr10 17319743 17320209 -122996556 + MLT1C LTR MaLR 2 467 0 878 229 80 53 chr10 17320209 17320251 -122996514 + L1ME LINE L1 5592 5631 -539 2478 126 31 14 chr10 17320251 17320609 -122996156 + THE1B LTR MaLR 1 364 0 878 229 80 53 chr10 17320609 17320766 -122995999 + L1ME LINE L1 5631 5808 -362 198 167 0 0 chr10 17320772 17320802 -122995963 - MIR SINE MIR -24 238 209 * 623 296 72 66 chr10 17320800 17320981 -122995784 - L2 LINE L2 -99 3214 3036 1942 168 30 64 chr10 17320981 17321385 -122995380 + MLT1B LTR MaLR 1 390 0 623 296 72 66 chr10 17321385 17321691 -122995074 - L2 LINE L2 -277 3036 2722 2424 106 0 0 chr10 17321861 17322173 -122994592 + AluSx SINE Alu 1 312 0 1410 221 111 22 chr10 17322599 17322970 -122993795 + L1MC4 LINE L1 6476 6879 -1163 1896 176 0 0 chr10 17322970 17323282 -122993483 + AluJb SINE Alu 1 312 0 329 287 0 0 chr10 17323384 17323485 -122993280 + AluJb SINE Alu 202 302 0 653 202 84 22 chr10 17323528 17323706 -122993059 + L1MC4 LINE L1 6880 7068 -974 2114 114 0 4 chr10 17323921 17324202 -122992563 - AluSg SINE Alu -30 280 1 1103 232 187 27 chr10 17324202 17324432 -122992333 + L1MC4 LINE L1 7464 7656 -386 1726 155 13 43 chr10 17324432 17324736 -122992029 - AluJb SINE Alu -17 295 1 1103 232 187 27 chr10 17324736 17324880 -122991885 + L1MC4 LINE L1 7656 7898 -144 2150 217 58 26 chr10 17324935 17325160 -122991605 + L1MB5 LINE L1 5652 5868 -306 1639 140 21 92 chr10 17325160 17325496 -122991269 + AluJb SINE Alu 1 312 0 2150 217 58 26 chr10 17325496 17325792 -122990973 + L1MB5 LINE L1 5868 6174 0 2203 108 3 0 chr10 17325804 17326092 -122990673 + AluSx SINE Alu 1 289 -23 23 33 0 0 chr10 17326095 17326125 -122990640 + AT_rich Low_complexity Low_complexity 1 30 0 2200 134 0 0 chr10 17326127 17326432 -122990333 + AluSc SINE Alu 1 305 -4 1692 300 95 13 chr10 17326458 17327081 -122989684 - L2 LINE L2 -649 2665 1992 1528 142 58 52 chr10 17327082 17327426 -122989339 + MER4A LTR ERV1 1 346 -318 599 119 222 24 chr10 17327558 17327684 -122989081 + MER4C LTR ERV1 296 446 -19 1615 269 79 61 chr10 17327761 17328012 -122988753 - L1MCc LINE L1 -3667 3274 3029 1502 216 0 7 chr10 17328012 17328309 -122988456 + AluJo SINE Alu 1 295 -17 1615 269 79 61 chr10 17328309 17328455 -122988310 - L1MCc LINE L1 -3912 3029 2887 2328 88 0 28 chr10 17328455 17328775 -122987990 - AluY SINE Alu 0 311 1 1615 269 79 61 chr10 17328775 17329613 -122987152 - L1MCc LINE L1 -4054 2887 2030 299 169 17 0 chr10 17329620 17329679 -122987086 - AluSp/q SINE Alu 0 303 244 753 208 134 7 chr10 17329734 17329883 -122986882 - AluJb SINE Alu -59 253 86 855 288 79 26 chr10 17329883 17330560 -122986205 - L1MCc LINE L1 -4906 1517 1129 4042 113 13 0 chr10 17330910 17331457 -122985308 + MER41A LTR ERV1 1 554 0 2214 73 3 98 chr10 17331997 17332185 -122984580 - AluSp SINE Alu -6 297 152 2180 136 0 0 chr10 17332185 17332495 -122984270 - AluSx SINE Alu 0 312 3 2214 73 3 98 chr10 17332495 17332634 -122984131 - AluSp SINE Alu -151 152 1 3813 113 48 2 chr10 17332834 17333375 -122983390 + MER61E LTR ERV1 1 566 -3 527 247 88 18 chr10 17333489 17333659 -122983106 + MLT1C LTR MaLR 6 187 -280 1636 149 15 15 chr10 17333662 17333924 -122982841 + AluJo SINE Alu 12 273 -39 419 123 0 14 chr10 17333934 17334007 -122982758 + (GGA)n Simple_repeat Simple_repeat 1 72 0 1271 221 14 7 chr10 17334016 17334292 -122982473 + MLT1C LTR MaLR 188 465 -2 1778 135 12 0 chr10 17334668 17334927 -122981838 + AluSx SINE Alu 7 268 -44 234 91 0 0 chr10 17334937 17334970 -122981795 + (CA)n Simple_repeat Simple_repeat 2 34 0 3191 120 5 11 chr10 17334971 17335420 -122981345 + LTR8 LTR ERV1 246 691 0 499 223 150 50 chr10 17335438 17335658 -122981107 - MIR SINE MIR -12 250 9 921 178 25 93 chr10 17336057 17336293 -122980472 + AluJo SINE Alu 1 220 -92 2083 140 0 7 chr10 17336852 17337160 -122979605 - AluJb SINE Alu -6 306 1 1918 140 7 27 chr10 17337517 17337817 -122978948 + AluSx SINE Alu 1 294 -18 1782 157 0 7 chr10 17338253 17338540 -122978225 - AluJo SINE Alu -27 285 1 799 306 92 25 chr10 17338587 17338743 -122978022 - MLT1L LTR MaLR -8 607 463 619 216 9 0 chr10 17338743 17338854 -122977911 - MER81 DNA DNA -2 112 1 799 306 92 25 chr10 17338854 17339178 -122977587 - MLT1L LTR MaLR -152 463 95 1606 134 4 4 chr10 17339200 17339432 -122977333 + AluJo SINE Alu 43 274 -38 2028 128 0 0 chr10 17342351 17342633 -122974132 + AluSx SINE Alu 18 299 -13 864 168 0 0 chr10 17342690 17342821 -122973944 - FLAM_C SINE Alu -12 131 1 785 334 102 5 chr10 17342849 17343241 -122973524 + LTR16A LTR ERVL 1 430 -20 836 138 16 0 chr10 17343530 17343653 -122973112 - FLAM_C SINE Alu -7 126 2 1952 146 7 0 chr10 17343705 17343992 -122972773 + AluSx SINE Alu 5 293 -19 29 28 0 0 chr10 17344015 17344051 -122972714 + AT_rich Low_complexity Low_complexity 1 36 0 1228 269 99 17 chr10 17344249 17344837 -122971928 + L1ME2 LINE L1 3915 4550 -1596 1108 226 54 10 chr10 17344831 17345145 -122971620 + L1ME2 LINE L1 5579 5906 -258 * 1426 196 11 8 chr10 17345145 17345411 -122971354 + AluJo SINE Alu 1 267 -45 25 0 0 0 chr10 17345415 17345440 -122971325 + AT_rich Low_complexity Low_complexity 1 25 0 480 94 0 188 chr10 17345441 17345526 -122971239 - L1PB3 LINE L1 -2 6152 6093 2197 121 0 16 chr10 17345526 17345841 -122970924 - AluSx SINE Alu -2 310 1 480 94 0 188 chr10 17345841 17345872 -122970893 - L1PB3 LINE L1 -61 6093 6058 951 215 46 15 chr10 17345909 17346170 -122970595 + L1ME2 LINE L1 5896 6164 0 673 266 135 54 chr10 17346305 17346505 -122970260 - LTR33 LTR ERVL -8 513 331 1578 173 0 55 chr10 17346505 17346812 -122969953 + AluJo SINE Alu 1 290 -22 673 266 135 54 chr10 17346812 17347077 -122969688 - LTR33 LTR ERVL -190 331 10 885 148 0 15 chr10 17347183 17347318 -122969447 - FLAM_C SINE Alu 0 133 1 1082 265 95 8 chr10 17348800 17349200 -122967565 - Zaphod DNA AcHobo -1 4030 3596 936 187 117 35 chr10 17349229 17349545 -122967220 - Zaphod DNA AcHobo -3081 950 609 1084 164 0 17 chr10 17349553 17349730 -122967035 - AluJo/FRAM SINE Alu -5 307 134 1748 158 10 3 chr10 17349730 17350021 -122966744 - AluSx SINE Alu -16 296 4 604 254 20 178 chr10 17350025 17350339 -122966426 - Zaphod DNA AcHobo -3417 614 252 2365 105 0 0 chr10 17350339 17350644 -122966121 + AluSg SINE Alu 1 305 -5 604 254 20 178 chr10 17350644 17350803 -122965962 - Zaphod DNA AcHobo -3779 252 235 2294 107 3 0 chr10 17350803 17351102 -122965663 + AluSx SINE Alu 1 300 -12 604 254 20 178 chr10 17351102 17351171 -122965594 - Zaphod DNA AcHobo -3796 235 157 635 159 0 97 chr10 17351467 17351612 -122965153 + FLAM_C SINE Alu 13 143 0 26 30 0 0 chr10 17351581 17351614 -122965151 + AT_rich Low_complexity Low_complexity 1 33 0 * 2146 119 7 0 chr10 17351632 17351927 -122964838 + AluSq SINE Alu 1 297 -16 992 151 0 12 chr10 17351969 17352141 -122964624 + L1MA6 LINE L1 6131 6300 0 1784 139 13 43 chr10 17352283 17352586 -122964179 - AluJb SINE Alu -18 294 1 1686 156 46 29 chr10 17352983 17353290 -122963475 - AluJo SINE Alu 0 312 1 2095 113 3 46 chr10 17354255 17354582 -122962183 + AluSq SINE Alu 1 313 0 1613 177 7 11 chr10 17355268 17355551 -122961214 + AluJb SINE Alu 1 282 -30 2165 118 7 0 chr10 17357368 17357665 -122959100 + AluSx SINE Alu 1 299 -13 1494 178 7 36 chr10 17358806 17358948 -122957817 + AluJo SINE Alu 1 133 -179 2248 102 7 0 chr10 17358948 17359241 -122957524 + AluSx SINE Alu 1 295 -17 1494 178 7 36 chr10 17359241 17359379 -122957386 + AluJo SINE Alu 133 273 -39 197 319 43 21 chr10 17359673 17359767 -122956998 + MIR SINE MIR 31 126 -136 661 210 0 108 chr10 17359822 17359940 -122956825 + MER69A DNA AcHobo 4 94 -2432 1581 138 88 72 chr10 17359940 17360245 -122956520 - AluJb SINE Alu 0 312 3 661 210 0 108 chr10 17360245 17360321 -122956444 + MER69A DNA AcHobo 94 177 0 2115 96 6 53 chr10 17360580 17360902 -122955863 + AluSg SINE Alu 1 307 -3 1884 166 3 3 chr10 17361027 17361335 -122955430 + AluJo SINE Alu 1 308 -4 904 217 81 83 chr10 17361508 17361562 -122955203 + LOR1b LTR ERV1 66 119 -342 2522 50 0 3 chr10 17361562 17361860 -122954905 - AluY SINE Alu -14 297 1 904 217 81 83 chr10 17361860 17362202 -122954563 + LOR1b LTR ERV1 119 461 0 1249 167 194 8 chr10 17362438 17362690 -122954075 - AluJo SINE Alu -13 299 1 207 167 0 0 chr10 17362768 17362810 -122953955 + CT-rich Low_complexity Low_complexity 3 44 0 2260 119 3 0 chr10 17362850 17363160 -122953605 - AluSx SINE Alu -1 311 1 349 264 38 130 chr10 17363332 17363571 -122953194 + L3 LINE CR1 583 799 -778 2183 106 0 17 chr10 17363640 17363932 -122952833 - AluSx SINE Alu -25 287 1 419 316 176 35 chr10 17364021 17364448 -122952317 + L3 LINE CR1 1021 1507 -70 1988 122 3 14 chr10 17364600 17364944 -122951821 + AluSx SINE Alu 1 341 0 385 259 0 53 chr10 17364999 17365130 -122951635 - L2 LINE L2 -7 3306 3183 209 331 39 62 chr10 17366907 17367037 -122949728 - L2 LINE L2 -1 3312 3186 1599 173 0 19 chr10 17367073 17367375 -122949390 - AluJb SINE Alu 0 318 22 2355 110 0 0 chr10 17367402 17367711 -122949054 + AluSg SINE Alu 1 309 -1 23 0 0 0 chr10 17367761 17367784 -122948981 + AT_rich Low_complexity Low_complexity 1 23 0 1333 123 5 5 chr10 17367804 17367991 -122948774 - AluSx SINE Alu -125 187 1 2065 127 7 0 chr10 17368379 17368670 -122948095 - AluSq SINE Alu -20 293 1 213 342 0 0 chr10 17369161 17369240 -122947525 + L2 LINE L2 2900 2978 -294 255 138 31 15 chr10 17369303 17369368 -122947397 + (TAA)n Simple_repeat Simple_repeat 2 67 0 1410 227 4 4 chr10 17369370 17369648 -122947117 - AluJo SINE Alu -28 284 7 1868 196 105 47 chr10 17369716 17370181 -122946584 - MLT1D LTR MaLR -10 495 4 2099 138 0 0 chr10 17370278 17370576 -122946189 + AluSx SINE Alu 1 298 -14 192 309 0 0 chr10 17370615 17370670 -122946095 + L2 LINE L2 3240 3294 -19 1568 104 35 35 chr10 17370892 17371123 -122945642 + AluSx SINE Alu 64 294 -18 640 281 6 0 chr10 17371123 17371283 -122945482 + MER58B DNA MER1_type 181 341 0 584 173 0 10 chr10 17371324 17371428 -122945337 - U13 snRNA snRNA -1 103 1 2072 154 0 0 chr10 17371445 17371743 -122945022 + AluSx SINE Alu 1 298 -14 194 0 39 0 chr10 17371819 17371845 -122944920 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1830 184 3 3 chr10 17372253 17372562 -122944203 + AluJb SINE Alu 1 309 -3 2453 64 0 0 chr10 17372759 17373093 -122943672 - AluY SINE Alu 0 334 1 281 292 32 52 chr10 17373215 17373369 -122943396 + MIR SINE MIR 47 197 -65 1843 137 4 14 chr10 17374446 17374723 -122942042 - AluJo SINE Alu -25 287 14 2767 156 8 35 chr10 17375069 17375167 -122941598 - MER66B LTR ERV1 0 486 387 2212 88 0 0 chr10 17375167 17375441 -122941324 - AluSg SINE Alu -18 292 19 2767 156 8 35 chr10 17375441 17375761 -122941004 - MER66B LTR ERV1 -99 387 80 1870 119 0 32 chr10 17375761 17376046 -122940719 - AluSx SINE Alu -36 276 1 2767 156 8 35 chr10 17376046 17376119 -122940646 - MER66B LTR ERV1 -406 80 7 217 360 27 9 chr10 17376153 17376264 -122940501 + MIR SINE MIR 50 162 -100 225 108 0 0 chr10 17377792 17377829 -122938936 + (TC)n Simple_repeat Simple_repeat 1 37 0 1790 160 34 0 chr10 17377908 17378201 -122938564 - AluJo SINE Alu -5 307 5 990 189 13 57 chr10 17378490 17378718 -122938047 - MER20 DNA MER1_type -1 218 1 2936 153 87 0 chr10 17378726 17379211 -122937554 + MER1A DNA MER1_type 1 527 0 1525 198 116 6 chr10 17379435 17379764 -122937001 + MLT1A1 LTR MaLR 1 365 0 343 298 43 43 chr10 17379818 17380006 -122936759 + MIR SINE MIR 20 207 -55 2044 105 7 7 chr10 17381913 17382190 -122934575 + AluSx SINE Alu 30 306 -6 225 119 0 0 chr10 17382225 17382267 -122934498 + (TC)n Simple_repeat Simple_repeat 2 43 0 222 118 0 0 chr10 17382267 17382301 -122934464 + (CA)n Simple_repeat Simple_repeat 1 34 0 536 141 0 0 chr10 17383157 17383235 -122933530 + AluS SINE Alu 2 79 -234 1006 188 12 6 chr10 17383235 17383405 -122933360 + Tigger3(Golem) DNA MER2_type 2858 3028 -1 186 191 0 0 chr10 17383585 17383632 -122933133 + A-rich Low_complexity Low_complexity 1 47 0 2237 120 0 0 chr10 17383739 17384038 -122932727 - AluSc SINE Alu -10 299 1 624 245 32 7 chr10 17384446 17384601 -122932164 - Zaphod DNA AcHobo -3407 624 466 1027 115 0 0 chr10 17384613 17384752 -122932013 - FLAM_C SINE Alu -1 142 4 886 282 55 11 chr10 17384757 17385030 -122931735 - Zaphod DNA AcHobo -3559 472 188 2170 135 0 3 chr10 17385107 17385410 -122931355 + AluSx SINE Alu 1 302 -10 684 225 0 0 chr10 17385410 17385570 -122931195 + GA-rich Low_complexity Low_complexity 1 160 0 1153 229 122 24 chr10 17385670 17386006 -122930759 - L1MC4 LINE L1 -1198 6844 6476 2172 134 0 0 chr10 17386434 17386741 -122930024 - AluSx SINE Alu -3 309 3 276 250 23 23 chr10 17387087 17387175 -122929590 - L1MC5 LINE L1 -36 7925 7838 820 152 0 0 chr10 17387479 17387604 -122929161 + FLAM_C SINE Alu 2 126 -7 565 149 190 0 chr10 17387757 17387878 -122928887 + FRAM SINE Alu 18 161 -15 1946 122 27 3 chr10 17387878 17388172 -122928593 + AluSc SINE Alu 1 301 -8 207 0 0 0 chr10 17388543 17388566 -122928199 + (A)n Simple_repeat Simple_repeat 1 23 0 348 295 16 74 chr10 17388605 17388725 -122928040 - Zaphod DNA AcHobo -3696 335 228 2162 120 3 0 chr10 17388725 17389024 -122927741 + AluSx SINE Alu 1 300 -12 348 295 16 74 chr10 17389024 17389093 -122927672 - Zaphod DNA AcHobo -3803 228 157 589 163 0 0 chr10 17389388 17389486 -122927279 + FLAM_C SINE Alu 13 110 -33 26 30 0 0 chr10 17389504 17389537 -122927228 + AT_rich Low_complexity Low_complexity 1 33 0 2146 119 7 0 chr10 17389555 17389850 -122926915 + AluSq SINE Alu 1 297 -16 992 151 0 12 chr10 17389892 17390064 -122926701 + L1MA6 LINE L1 6131 6300 0 1607 141 20 53 chr10 17390206 17390510 -122926255 - AluJb SINE Alu -18 294 1 2237 123 3 0 chr10 17391538 17391838 -122924927 + AluSx SINE Alu 1 301 -11 246 62 0 0 chr10 17391933 17391965 -122924800 + (TCCA)n Simple_repeat Simple_repeat 3 34 0 200 329 80 59 chr10 17392193 17392430 -122924335 - L2 LINE L2 -219 3053 2812 1327 143 9 19 chr10 17393269 17393485 -122923280 - AluSg/x SINE Alu -15 297 84 207 0 0 0 chr10 17393813 17393836 -122922929 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1990 161 0 0 chr10 17393838 17394137 -122922628 - AluSx SINE Alu -13 299 1 1785 164 22 22 chr10 17394137 17394449 -122922316 - AluJo SINE Alu 0 312 1 13002 83 1 1 chr10 17394793 17396428 -122920337 - HERVL-A2 LTR ERVL -1979 3675 2041 662 87 0 39 chr10 17396472 17396575 -122920190 - AluSg/x SINE Alu -4 306 208 11001 112 5 6 chr10 17396575 17398093 -122918672 - HERVL-A2 LTR ERVL -4100 1554 39 1932 151 32 11 chr10 17398093 17398448 -122918317 - MLT2A2 LTR ERVL -149 304 1 2200 129 0 10 chr10 17398476 17398787 -122917978 + AluSx SINE Alu 2 309 -3 326 257 0 19 chr10 17398976 17399081 -122917684 + MER113 DNA MER1_type? 12 114 -407 261 139 0 0 chr10 17399243 17399286 -122917479 + (CA)n Simple_repeat Simple_repeat 2 44 0 1957 162 0 19 chr10 17399342 17399651 -122917114 - AluSx SINE Alu -9 303 1 420 219 0 0 chr10 17399667 17399795 -122916970 + CT-rich Low_complexity Low_complexity 1 128 0 2071 117 11 0 chr10 17399815 17400098 -122916667 - AluSx SINE Alu -26 286 1 788 157 0 0 chr10 17400149 17400264 -122916501 - FLAM_C SINE Alu -18 115 1 188 163 23 0 chr10 17400396 17400439 -122916326 + (TA)n Simple_repeat Simple_repeat 2 45 0 445 209 45 18 chr10 17400918 17401028 -122915737 - MIR3 SINE MIR -4 204 92 2117 124 14 3 chr10 17401342 17401632 -122915133 + AluSx SINE Alu 2 294 -18 251 108 36 60 chr10 17401825 17401908 -122914857 + (TAA)n Simple_repeat Simple_repeat 1 81 0 1909 176 0 0 chr10 17401995 17402297 -122914468 + AluJb SINE Alu 1 302 -10 1744 187 7 0 chr10 17402460 17402749 -122914016 + AluJo SINE Alu 4 294 -18 241 242 32 0 chr10 17403266 17403328 -122913437 - L2 LINE L2 0 3272 3209 1909 123 93 30 chr10 17403799 17404132 -122912633 + THE1B LTR MaLR 1 354 -10 2502 39 0 3 chr10 17404245 17404561 -122912204 - AluY SINE Alu 0 315 1 1917 140 3 32 chr10 17404649 17404957 -122911808 - AluSx SINE Alu -13 299 1 286 288 62 27 chr10 17406012 17406158 -122910607 - L1ME4a LINE L1 -14 6107 5957 1906 128 7 3 chr10 17406772 17407096 -122909669 - AluSp SINE Alu 0 325 1 192 338 13 0 chr10 17407449 17407526 -122909239 + MIR3 SINE MIR 117 194 -14 24 77 0 0 chr10 17407559 17407611 -122909154 + AT_rich Low_complexity Low_complexity 1 52 0 21 57 0 0 chr10 17407718 17407753 -122909012 + AT_rich Low_complexity Low_complexity 1 35 0 1891 104 82 0 chr10 17407797 17408065 -122908700 - AluSx SINE Alu -22 290 1 202 202 0 45 chr10 17408326 17408415 -122908350 + (TTAAA)n Simple_repeat Simple_repeat 3 87 0 2245 117 0 0 chr10 17409036 17409334 -122907431 - AluSq SINE Alu -15 298 1 2293 117 0 0 chr10 17409619 17409919 -122906846 - AluSx SINE Alu -12 300 1 986 153 6 0 chr10 17410084 17410261 -122906504 + GA-rich Low_complexity Low_complexity 3 180 0 633 186 7 71 chr10 17410265 17410405 -122906360 - FLAM_C SINE Alu -2 131 1 201 143 0 0 chr10 17410460 17410495 -122906270 + (TTCC)n Simple_repeat Simple_repeat 4 38 0 275 326 12 0 chr10 17410596 17410682 -122906083 - ERVL LTR ERVL -2560 3204 3118 1747 243 88 36 chr10 17410709 17410948 -122905817 - LTR68 LTR ERV1 -4 736 511 2256 127 0 0 chr10 17410948 17411256 -122905509 - AluSx SINE Alu -4 308 1 1747 243 88 36 chr10 17411256 17411626 -122905139 - LTR68 LTR ERV1 -229 511 1 1281 196 25 83 chr10 17411732 17412059 -122904706 - AluJb SINE Alu -4 308 1 2034 104 0 83 chr10 17412070 17412407 -122904358 - AluSx SINE Alu -3 309 1 2278 121 0 0 chr10 17412888 17413194 -122903571 - AluSx SINE Alu -6 306 1 2019 116 4 4 chr10 17413481 17413781 -122902984 - AluSx SINE Alu 0 315 16 498 171 0 45 chr10 17414227 17414315 -122902450 + MER21B LTR ERV1 1 84 -779 2127 116 0 3 chr10 17414318 17414603 -122902162 - AluSx SINE Alu -9 303 20 5333 67 4 3 chr10 17414609 17415286 -122901479 + MER4E LTR ERV1 89 766 0 2302 105 0 0 chr10 17415869 17416164 -122900601 + AluSx SINE Alu 6 300 -12 1911 151 7 0 chr10 17416179 17416458 -122900307 + AluSq SINE Alu 5 285 -28 1825 213 3 19 chr10 17416835 17417206 -122899559 - MLT1A1 LTR MaLR 0 365 1 591 219 0 8 chr10 17417275 17417394 -122899371 - FLAM_C SINE Alu -10 133 16 2005 125 4 4 chr10 17417677 17417985 -122898780 - AluSc SINE Alu 0 308 1 1862 143 3 44 chr10 17417988 17418303 -122898462 - AluJo SINE Alu -10 302 1 21 0 0 0 chr10 17419195 17419216 -122897549 + AT_rich Low_complexity Low_complexity 1 21 0 775 123 15 23 chr10 17420671 17420801 -122895964 + FLAM_C SINE Alu 4 132 -1 2215 119 7 0 chr10 17421210 17421504 -122895261 + AluSx SINE Alu 1 296 -16 1822 152 6 48 chr10 17421760 17421934 -122894831 - AluJo SINE Alu -9 303 123 188 35 35 0 chr10 17421934 17421963 -122894802 + (TTG)n Simple_repeat Simple_repeat 1 30 0 2073 132 0 0 chr10 17421963 17422244 -122894521 - AluSx SINE Alu -31 281 1 1822 152 6 48 chr10 17422244 17422384 -122894381 - AluJo SINE Alu -187 125 1 211 278 0 42 chr10 17422720 17422792 -122893973 + MIR3 SINE MIR 138 206 -2 216 97 0 0 chr10 17423039 17423070 -122893695 + (CA)n Simple_repeat Simple_repeat 1 31 0 199 258 97 0 chr10 17423158 17423220 -122893545 - MIR SINE MIR -1 261 194 1703 158 0 7 chr10 17423228 17423500 -122893265 - AluJo SINE Alu -16 296 27 270 278 193 52 chr10 17423519 17423557 -122893208 + MIR SINE MIR 21 52 -210 2546 98 13 16 chr10 17423557 17423933 -122892832 - THE1C LTR MaLR 0 375 1 270 278 193 52 chr10 17423933 17424106 -122892659 + MIR SINE MIR 52 262 0 2183 115 3 3 chr10 17424334 17424629 -122892136 - AluSx SINE Alu -17 295 1 1644 124 9 0 chr10 17424629 17424861 -122891904 - AluSg/x SINE Alu -13 299 65 446 175 12 0 chr10 17425128 17425208 -122891557 - MLT1J LTR MaLR -359 152 72 219 304 116 9 chr10 17425271 17425383 -122891382 - MIR SINE MIR -108 154 31 34 55 0 0 chr10 17425552 17425607 -122891158 + AT_rich Low_complexity Low_complexity 1 55 0 1803 157 0 26 chr10 17425779 17426084 -122890681 - AluJb SINE Alu -15 297 1 456 165 13 0 chr10 17426590 17426669 -122890096 - MLT1J2 LTR MaLR -2 448 369 1192 131 0 0 chr10 17426691 17426859 -122889906 - AluSg/x SINE Alu -8 304 137 736 243 98 8 chr10 17426895 17427186 -122889579 - MLT1J2 LTR MaLR -103 343 20 1904 132 8 0 chr10 17427311 17427577 -122889188 + AluSx SINE Alu 14 281 -31 577 94 58 0 chr10 17427579 17427717 -122889048 + (TA)n Simple_repeat Simple_repeat 2 147 0 2049 187 80 67 chr10 17427872 17428225 -122888540 - L1MB4 LINE L1 0 6180 5814 2210 129 0 3 chr10 17428225 17428536 -122888229 - AluSq SINE Alu -3 310 1 2049 187 80 67 chr10 17428536 17428797 -122887968 - L1MB4 LINE L1 -366 5814 5558 2249 76 31 3 chr10 17428944 17429232 -122887533 + AluSc SINE Alu 1 296 -13 1720 167 3 50 chr10 17430289 17430465 -122886300 - AluSx SINE Alu -4 308 125 216 0 0 0 chr10 17430465 17430489 -122886276 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1996 123 14 0 chr10 17430489 17430642 -122886123 - AluSg1 SINE Alu -28 281 121 189 74 0 0 chr10 17430642 17430669 -122886096 + (TG)n Simple_repeat Simple_repeat 2 28 0 1996 123 14 0 chr10 17430669 17430792 -122885973 - AluSg1 SINE Alu -188 121 1 1720 167 3 50 chr10 17430792 17430937 -122885828 - AluSx SINE Alu -185 127 1 2169 125 3 0 chr10 17431201 17431496 -122885269 - AluSx SINE Alu -16 296 1 2099 116 0 10 chr10 17432072 17432383 -122884382 + AluSx SINE Alu 3 312 0 1819 144 0 4 chr10 17432712 17432982 -122883783 + AluJo SINE Alu 1 269 -43 21 0 0 0 chr10 17432988 17433009 -122883756 + AT_rich Low_complexity Low_complexity 1 21 0 2855 132 73 119 chr10 17433026 17433709 -122883056 + MER39B LTR ERV1 2 653 0 1803 97 14 42 chr10 17434697 17434985 -122881780 - AluJo SINE Alu -11 301 22 2316 94 7 0 chr10 17435369 17435666 -122881099 - AluSg SINE Alu -11 299 1 1335 154 50 93 chr10 17435672 17435952 -122880813 - AluJb SINE Alu -25 287 20 272 136 45 0 chr10 17436086 17436130 -122880635 + AluJo SINE Alu 118 163 -139 1902 116 33 7 chr10 17436143 17436419 -122880346 + AluSx SINE Alu 18 300 -12 188 208 57 0 chr10 17436682 17436735 -122880030 - L2 LINE L2 -1241 2073 2018 837 142 0 15 chr10 17437209 17437343 -122879422 - FLAM_C SINE Alu -1 132 1 1886 131 60 7 chr10 17437548 17437831 -122878934 - AluSx SINE Alu -14 298 1 192 158 0 0 chr10 17437883 17437921 -122878844 + A-rich Low_complexity Low_complexity 1 38 0 1097 248 57 19 chr10 17438039 17438357 -122878408 + MLT1I LTR MaLR 71 400 -9 818 95 26 9 chr10 17439969 17440085 -122876680 + FLAM_C SINE Alu 1 118 -25 2103 132 26 0 chr10 17440178 17440481 -122876284 + AluSx SINE Alu 1 311 -1 1977 163 89 6 chr10 17440558 17440908 -122875857 - MLT1B LTR MaLR -9 381 3 2246 92 24 0 chr10 17441479 17441773 -122874992 - AluSc SINE Alu -8 301 1 646 134 177 49 chr10 17441773 17441937 -122874828 - AluJo SINE Alu -15 297 113 841 144 0 0 chr10 17442047 17442172 -122874593 - AluJo SINE Alu -176 126 2 286 250 23 23 chr10 17442476 17442564 -122874201 + L1MC5 LINE L1 7838 7925 -36 1173 108 0 24 chr10 17442746 17442913 -122873852 + AluSg/x SINE Alu 135 297 -13 1573 128 0 28 chr10 17443668 17443918 -122872847 + AluY SINE Alu 62 304 -7 2284 93 0 16 chr10 17444101 17444411 -122872354 - AluSx SINE Alu -7 305 1 194 321 0 0 chr10 17444554 17444610 -122872155 - L3b LINE CR1 -263 1320 1265 * 197 179 26 0 chr10 17444607 17444646 -122872119 + MIR SINE MIR 118 157 -105 2592 115 3 6 chr10 17445484 17445849 -122870916 - THE1B LTR MaLR 0 364 1 2071 153 30 21 chr10 17446392 17446764 -122870001 - THE1C LTR MaLR 0 375 1 2053 138 0 0 chr10 17447062 17447351 -122869414 - AluSx SINE Alu -23 289 1 1865 163 15 18 chr10 17447792 17448123 -122868642 + MER44D DNA MER2_type 10 609 0 1928 144 38 0 chr10 17448226 17448518 -122868247 + AluSq SINE Alu 2 304 -9 2248 113 0 0 chr10 17448755 17449048 -122867717 + AluSx SINE Alu 1 293 -19 1885 159 3 19 chr10 17449388 17449697 -122867068 + AluJo SINE Alu 1 304 -8 191 328 98 29 chr10 17450119 17450293 -122866472 - L2 LINE L2 -671 2643 2458 1230 161 13 27 chr10 17450351 17450575 -122866190 - AluJo SINE Alu -91 221 1 189 94 0 0 chr10 17450576 17450608 -122866157 + (T)n Simple_repeat Simple_repeat 1 32 0 255 271 225 0 chr10 17450853 17450982 -122865783 + MIR SINE MIR 93 250 -12 2273 108 0 0 chr10 17451185 17451480 -122865285 + AluSx SINE Alu 5 299 -13 719 228 138 105 chr10 17452098 17452669 -122864096 - L1ME4a LINE L1 -3 6118 5529 21 36 0 0 chr10 17452930 17452958 -122863807 + AT_rich Low_complexity Low_complexity 1 28 0 2453 133 23 0 chr10 17453003 17453357 -122863408 + THE1B LTR MaLR 3 364 0 905 70 0 0 chr10 17454129 17454243 -122862522 + AluSg/x SINE Alu 197 310 -2 245 207 146 37 chr10 17454476 17454558 -122862207 + MIR SINE MIR 77 167 -95 1559 114 0 5 chr10 17454631 17454842 -122861923 + AluSg SINE Alu 1 210 -100 1797 194 14 20 chr10 17455242 17455301 -122861464 - MLT1A1 LTR MaLR -12 353 295 2199 113 0 3 chr10 17455301 17455602 -122861163 + AluSg SINE Alu 1 300 -10 1797 194 14 20 chr10 17455602 17455887 -122860878 - MLT1A1 LTR MaLR -70 295 11 384 280 158 67 chr10 17455891 17456367 -122860398 - MLT1H1 LTR MaLR -29 526 2 462 68 0 0 chr10 17456698 17456757 -122860008 + U2 snRNA snRNA 1 59 -129 21 0 0 0 chr10 17456772 17456793 -122859972 + AT_rich Low_complexity Low_complexity 1 21 0 2151 103 7 0 chr10 17456793 17457075 -122859690 - AluSg SINE Alu -26 284 1 251 269 65 32 chr10 17457158 17457251 -122859514 - MIR SINE MIR -114 148 53 1645 185 30 20 chr10 17457259 17457557 -122859208 - AluJb SINE Alu -10 302 2 1832 184 7 0 chr10 17457594 17457899 -122858866 - AluJo SINE Alu -5 307 1 402 21 0 0 chr10 17457954 17458001 -122858764 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 932 144 0 0 chr10 17458040 17458172 -122858593 - AluSq/x SINE Alu -180 132 1 390 251 24 9 chr10 17458291 17458401 -122858364 - MIR3 SINE MIR -40 168 56 2257 107 0 0 chr10 17459031 17459329 -122857436 - AluSq SINE Alu -15 298 1 290 122 0 0 chr10 17460642 17460683 -122856082 + MADE1 DNA Mariner 1 41 -39 564 294 87 14 chr10 17461439 17461657 -122855108 + MIR SINE MIR 2 235 -27 1762 125 10 14 chr10 17461856 17462151 -122854614 + AluSp SINE Alu 1 294 -19 227 349 33 40 chr10 17463758 17463910 -122852855 - MIR SINE MIR -55 207 57 1215 143 0 0 chr10 17465130 17465305 -122851460 - AluSp SINE Alu -11 302 128 330 167 131 24 chr10 17466016 17466100 -122850665 - MIR3 SINE MIR -52 156 64 228 220 60 0 chr10 17466683 17466733 -122850032 + L3b LINE CR1 1282 1334 -249 2888 86 11 6 chr10 17467205 17467567 -122849198 + THE1B LTR MaLR 1 364 0 1536 134 28 146 chr10 17467568 17467992 -122848773 + THE1B-int LTR MaLR 2 375 -1205 478 255 52 68 chr10 17468493 17468685 -122848080 + L2 LINE L2 3123 3311 -2 370 243 87 0 chr10 17469221 17469324 -122847441 + L1ME LINE L1 5547 5658 -463 377 318 87 11 chr10 17469622 17469899 -122846866 - HAL1b LINE L1 -659 689 392 218 297 8 51 chr10 17469900 17470018 -122846747 + CT-rich Low_complexity Low_complexity 2 114 0 * 230 251 0 37 chr10 17469933 17470100 -122846665 + CT-rich Low_complexity Low_complexity 1 160 0 208 392 0 0 chr10 17470112 17470186 -122846579 + polypyrimidine Low_complexity Low_complexity 1 74 0 194 247 13 0 chr10 17470203 17470280 -122846485 + CT-rich Low_complexity Low_complexity 3 80 0 227 321 43 70 chr10 17471046 17471233 -122845532 + L2 LINE L2 3080 3261 -11 24 32 0 0 chr10 17471807 17471838 -122844927 + AT_rich Low_complexity Low_complexity 1 31 0 1254 219 38 22 chr10 17475353 17475672 -122841093 - L1MB8 LINE L1 -6 6172 5849 2001 138 6 6 chr10 17477291 17477603 -122839162 + AluSx SINE Alu 1 312 0 858 218 38 41 chr10 17477927 17478220 -122838545 + L1M4 LINE L1 4143 4434 -1712 319 300 22 67 chr10 17478862 17479042 -122837723 - L2 LINE L2 -200 3072 2901 213 226 16 16 chr10 17479994 17480056 -122836709 + C-rich Low_complexity Low_complexity 3 64 0 9847 46 0 2 chr10 17480262 17481498 -122835267 - L1P LINE L1 -2172 3974 2742 447 222 89 22 chr10 17481944 17482079 -122834686 + MER103 DNA DNA 11 154 -12 293 295 90 0 chr10 17482181 17482303 -122834462 - L3 LINE CR1 -723 854 722 385 276 6 49 chr10 17484264 17484427 -122832338 + L1M4 LINE L1 4903 5058 -1088 12663 54 7 0 chr10 17487309 17488926 -122827839 - L1P LINE L1 -3663 2483 855 357 214 36 0 chr10 17489033 17489117 -122827648 - MLT2E LTR ERVL -35 593 507 2116 129 0 20 chr10 17489158 17489460 -122827305 - AluSx SINE Alu -16 296 1 190 396 42 7 chr10 17491396 17491540 -122825225 - MIR SINE MIR -6 256 108 2249 102 0 3 chr10 17491753 17492047 -122824718 - AluSx SINE Alu -19 293 1 26 30 0 0 chr10 17492047 17492080 -122824685 + AT_rich Low_complexity Low_complexity 1 33 0 1967 133 7 20 chr10 17492530 17492830 -122823935 + AluSx SINE Alu 1 296 -16 198 0 0 0 chr10 17493275 17493297 -122823468 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 214 288 0 0 chr10 17494407 17494466 -122822299 + (TA)n Simple_repeat Simple_repeat 1 59 0 655 215 0 30 chr10 17494777 17494912 -122821853 + FLAM_A SINE Alu 1 131 -2 1101 227 102 69 chr10 17496131 17496580 -122820185 - MLT1C LTR MaLR 0 467 4 533 93 67 0 chr10 17496882 17496957 -122819808 + AluJ/FRAM SINE Alu 216 295 -17 24 0 0 0 chr10 17497543 17497567 -122819198 + AT_rich Low_complexity Low_complexity 1 24 0 225 0 0 0 chr10 17497568 17497593 -122819172 + (GA)n Simple_repeat Simple_repeat 1 25 0 1573 203 0 0 chr10 17497597 17497868 -122818897 - AluJb SINE Alu -41 271 1 758 259 64 69 chr10 17497888 17498436 -122818329 - L1MEd LINE L1 -4867 1252 708 631 138 26 10 chr10 17498591 17498786 -122817979 - L1MB2 LINE L1 -1 6170 5887 330 318 96 70 chr10 17498786 17498949 -122817816 - L1MEd LINE L1 -5555 564 407 2223 167 19 3 chr10 17498949 17499309 -122817456 - MER47A DNA MER2_type 0 366 1 330 318 96 70 chr10 17499309 17499686 -122817079 - L1MEd LINE L1 -5712 407 10 272 197 0 14 chr10 17499899 17499970 -122816795 + (CATATA)n Simple_repeat Simple_repeat 2 71 0 183 247 202 22 chr10 17501986 17502075 -122814690 - L2 LINE L2 0 3272 3168 690 148 14 84 chr10 17502390 17502532 -122814233 - FLAM_C SINE Alu -1 132 1 281 247 0 11 chr10 17502631 17502724 -122814041 + GA-rich Low_complexity Low_complexity 1 92 0 24 0 0 0 chr10 17503742 17503766 -122812999 + AT_rich Low_complexity Low_complexity 1 24 0 22 70 0 0 chr10 17503931 17503974 -122812791 + AT_rich Low_complexity Low_complexity 1 43 0 2186 133 3 0 chr10 17504132 17504433 -122812332 - AluSx SINE Alu -10 302 1 200 329 80 59 chr10 17505305 17505542 -122811223 + L2 LINE L2 2812 3053 -219 246 62 0 0 chr10 17505770 17505802 -122810963 + (TGGA)n Simple_repeat Simple_repeat 3 34 0 2237 123 3 0 chr10 17505897 17506197 -122810568 - AluSx SINE Alu -11 301 1 2095 100 13 39 chr10 17507254 17507563 -122809202 + AluSx SINE Alu 1 301 -11 334 250 34 0 chr10 17508077 17508165 -122808600 + MIR SINE MIR 104 194 -68 1724 158 0 21 chr10 17508372 17508698 -122808067 - AluJb SINE Alu 0 329 10 651 131 62 46 chr10 17508858 17508988 -122807777 - FLAM_C SINE Alu 0 143 12 1828 133 0 84 chr10 17509192 17509515 -122807250 - AluJo SINE Alu -16 296 1 1040 173 0 0 chr10 17509693 17509866 -122806899 - FRAM SINE Alu -1 175 3 2236 129 3 0 chr10 17509883 17510194 -122806571 - AluSx SINE Alu 0 312 1 516 32 0 0 chr10 17510292 17510354 -122806411 + (CA)n Simple_repeat Simple_repeat 2 63 0 309 264 11 0 chr10 17510837 17510924 -122805841 + MIR SINE MIR 167 254 -8 2363 100 0 0 chr10 17511673 17511974 -122804791 + AluSx SINE Alu 4 304 -8 198 0 0 0 chr10 17512029 17512051 -122804714 + (T)n Simple_repeat Simple_repeat 1 22 0 1009 128 0 0 chr10 17512051 17512184 -122804581 - AluSq/x SINE Alu -180 133 1 2033 115 28 7 chr10 17512196 17512357 -122804408 - AluSx SINE Alu -18 294 123 2376 112 0 3 chr10 17512357 17512669 -122804096 - AluSx SINE Alu -1 311 1 2033 115 28 7 chr10 17512669 17512795 -122803970 - AluSx SINE Alu -189 123 1 35 24 0 0 chr10 17513343 17513385 -122803380 + AT_rich Low_complexity Low_complexity 1 42 0 840 319 63 13 chr10 17513458 17513841 -122802924 + MARNA DNA Mariner 170 571 -15 190 343 121 28 chr10 17514870 17515301 -122801464 - L2 LINE L2 -1131 2183 1713 353 175 0 12 chr10 17516165 17516245 -122800520 + (TA)n Simple_repeat Simple_repeat 2 80 0 185 322 30 69 chr10 17516250 17516452 -122800313 - L2 LINE L2 -2408 906 713 21 36 0 0 chr10 17516789 17516817 -122799948 + AT_rich Low_complexity Low_complexity 1 28 0 2647 58 0 0 chr10 17517021 17517332 -122799433 - AluY SINE Alu 0 311 1 29 60 0 0 chr10 17517618 17517668 -122799097 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr10 17518833 17518855 -122797910 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 17521674 17521698 -122795067 + AT_rich Low_complexity Low_complexity 1 24 0 211 254 42 17 chr10 17522357 17522475 -122794290 + (TA)n Simple_repeat Simple_repeat 2 122 0 25 31 0 0 chr10 17527130 17527162 -122789603 + AT_rich Low_complexity Low_complexity 1 32 0 23 33 0 0 chr10 17527916 17527946 -122788819 + AT_rich Low_complexity Low_complexity 1 30 0 214 278 35 26 chr10 17529324 17529439 -122787326 + C-rich Low_complexity Low_complexity 4 119 0 26 0 0 0 chr10 17529701 17529727 -122787038 + GC_rich Low_complexity Low_complexity 1 26 0 24 77 0 0 chr10 17530292 17530344 -122786421 + GC_rich Low_complexity Low_complexity 1 52 0 27 73 0 0 chr10 17530651 17530706 -122786059 + GC_rich Low_complexity Low_complexity 1 55 0 189 0 0 0 chr10 17532226 17532247 -122784518 + (TTTC)n Simple_repeat Simple_repeat 3 23 0 644 307 69 5 chr10 17534270 17534488 -122782277 + MIR SINE MIR 29 260 -2 1897 139 6 52 chr10 17535013 17535337 -122781428 - AluSx SINE Alu -3 309 1 375 159 0 40 chr10 17537199 17537419 -122779346 + AluJo SINE Alu 1 292 -10 1488 191 10 48 chr10 17537986 17538295 -122778470 - AluJo SINE Alu -13 299 3 21 0 0 0 chr10 17539188 17539209 -122777556 + AT_rich Low_complexity Low_complexity 1 21 0 1514 185 36 45 chr10 17540887 17541195 -122775570 + AluJb SINE Alu 2 306 -6 1076 90 0 0 chr10 17541453 17541586 -122775179 + AluSq/x SINE Alu 1 133 -179 2180 132 7 0 chr10 17541589 17541932 -122774833 + AluSx SINE Alu 1 345 0 2181 99 7 3 chr10 17542285 17542578 -122774187 - AluSc SINE Alu -15 294 1 2358 109 0 0 chr10 17543567 17543878 -122772887 + AluSx SINE Alu 1 311 -1 886 189 19 61 chr10 17544157 17544328 -122772437 + MER3 DNA MER1_type 7 169 -40 2199 116 0 3 chr10 17544328 17544622 -122772143 + AluSx SINE Alu 1 293 -19 886 189 19 61 chr10 17544622 17544662 -122772103 + MER3 DNA MER1_type 169 209 0 183 208 0 38 chr10 17544689 17544742 -122772023 + L3b LINE CR1 1303 1353 -230 1710 165 84 14 chr10 17544847 17545204 -122771561 - MLT1B LTR MaLR -8 382 1 285 29 0 0 chr10 17546031 17546065 -122770700 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 722 133 106 0 chr10 17546065 17546178 -122770587 - FLAM_C SINE Alu -17 126 2 225 333 83 0 chr10 17546186 17546294 -122770471 + L2 LINE L2 3011 3127 -186 1472 166 85 30 chr10 17546296 17546591 -122770174 + MLT1B LTR MaLR 1 311 -79 203 156 44 0 chr10 17546615 17546660 -122770105 + T-rich Low_complexity Low_complexity 2 48 0 1466 135 11 135 chr10 17546827 17547096 -122769669 + MLT1B LTR MaLR 85 303 -87 1826 172 3 10 chr10 17547096 17547398 -122769367 - AluSx SINE Alu -8 304 5 1466 135 11 135 chr10 17547398 17547477 -122769288 + MLT1B LTR MaLR 303 390 0 359 274 71 0 chr10 17547517 17547630 -122769135 + L2 LINE L2 3174 3294 -19 191 313 15 0 chr10 17548020 17548087 -122768678 + L2 LINE L2 3244 3311 -2 224 177 32 0 chr10 17548607 17548669 -122768096 + A-rich Low_complexity Low_complexity 5 68 0 429 20 0 0 chr10 17549086 17549136 -122767629 + (TG)n Simple_repeat Simple_repeat 2 51 0 192 254 90 0 chr10 17549273 17549340 -122767425 - L2 LINE L2 -678 2636 2564 209 285 77 29 chr10 17549498 17549669 -122767096 - L2 LINE L2 -333 2980 2793 1002 153 44 57 chr10 17549740 17549752 -122767013 - L1MC2 LINE L1 -1 6343 6332 2113 118 7 0 chr10 17549752 17550048 -122766717 + AluSx SINE Alu 1 298 -14 1002 153 44 57 chr10 17550048 17550263 -122766502 - L1MC2 LINE L1 -12 6332 6119 1556 156 31 116 chr10 17550349 17550773 -122765992 + MLT1B LTR MaLR 1 388 -2 504 165 0 0 chr10 17550811 17550890 -122765875 + AluJ/FLAM SINE Alu 2 80 -232 1574 179 7 21 chr10 17550891 17551176 -122765589 - AluJo SINE Alu -31 281 1 1772 137 108 17 chr10 17551436 17551780 -122764985 + THE1C LTR MaLR 1 375 0 2140 111 0 27 chr10 17552691 17552988 -122763777 - AluSx SINE Alu -23 289 1 207 0 0 0 chr10 17553487 17553510 -122763255 + (A)n Simple_repeat Simple_repeat 1 23 0 2081 72 0 4 chr10 17554912 17555163 -122761602 + AluSc SINE Alu 41 290 -19 2534 155 62 0 chr10 17555387 17555788 -122760977 + MSTB LTR MaLR 1 426 0 647 287 45 20 chr10 17556060 17556262 -122760503 - MIR SINE MIR -32 230 24 180 0 0 0 chr10 17556281 17556301 -122760464 + (TGGGGG)n Simple_repeat Simple_repeat 1 20 0 2648 114 47 33 chr10 17556377 17556727 -122760038 + MSTA LTR MaLR 1 359 -69 2603 69 9 9 chr10 17556727 17557059 -122759706 - L1PA8 LINE L1 -2 6170 5839 2648 114 47 33 chr10 17557059 17557130 -122759635 + MSTA LTR MaLR 359 428 0 1111 216 32 5 chr10 17557131 17557349 -122759416 - MER58A DNA MER1_type 0 224 1 1480 151 76 31 chr10 17558931 17559248 -122757517 + THE1C LTR MaLR 1 331 -44 1421 179 4 0 chr10 17559248 17559482 -122757283 - AluSq SINE Alu -78 235 1 267 146 0 0 chr10 17559482 17559523 -122757242 + THE1C LTR MaLR 388 428 0 2404 110 0 0 chr10 17559953 17560261 -122756504 + AluSx SINE Alu 1 308 -4 2181 90 7 20 chr10 17560346 17560646 -122756119 - AluY SINE Alu -15 296 1 463 116 0 197 chr10 17561728 17561809 -122754956 + MER63 DNA MER1_type 601 642 -419 2152 112 21 0 chr10 17561809 17562094 -122754671 + AluSx SINE Alu 1 291 -21 463 116 0 197 chr10 17562094 17562159 -122754606 + MER63 DNA MER1_type 642 718 -343 784 229 78 23 chr10 17562450 17562668 -122754097 + MER63C DNA MER1_type 169 398 -532 2650 122 5 0 chr10 17562668 17563037 -122753728 - L1PB1 LINE L1 0 6151 5781 2042 134 0 13 chr10 17563065 17563364 -122753401 + AluSc SINE Alu 8 302 -7 980 191 0 0 chr10 17563372 17563534 -122753231 + FRAM SINE Alu 1 161 -15 366 207 99 9 chr10 17563546 17563657 -122753108 + L1MC5 LINE L1 6738 6858 -1103 765 125 0 10 chr10 17563658 17563762 -122753003 + FLAM_C SINE Alu 17 119 -24 718 130 0 7 chr10 17563762 17563891 -122752874 - L1M2 LINE L1 -386 5780 5656 2108 124 0 3 chr10 17563920 17564211 -122752554 + AluSq SINE Alu 1 290 -23 214 359 88 19 chr10 17564264 17564423 -122752342 - L2 LINE L2 -908 2406 2237 2155 56 0 4 chr10 17565113 17565382 -122751383 + L1PA10 LINE L1 5712 5979 -189 206 380 28 42 chr10 17565650 17565792 -122750973 + MIR3 SINE MIR 16 155 -53 285 350 81 0 chr10 17566431 17566554 -122750211 - MIR3 SINE MIR -3 205 73 199 321 7 102 chr10 17566568 17566705 -122750060 + L2 LINE L2 2930 3053 -219 644 298 13 14 chr10 17566788 17566973 -122749792 - MIR SINE MIR -62 146 2 215 287 111 50 chr10 17566979 17567160 -122749605 + L2 LINE L2 3105 3296 -17 2144 125 0 0 chr10 17567198 17567493 -122749272 + AluSx SINE Alu 1 295 -17 234 0 0 0 chr10 17567930 17567956 -122748809 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1996 140 0 34 chr10 17567958 17568280 -122748485 - AluSx SINE Alu -1 311 1 527 65 0 0 chr10 17568427 17568489 -122748276 - Alu SINE Alu -255 63 2 689 252 73 32 chr10 17569562 17569741 -122747024 + MIR SINE MIR 28 219 -43 2221 134 0 3 chr10 17569741 17570054 -122746711 + AluSx SINE Alu 1 312 0 689 252 73 32 chr10 17570054 17570092 -122746673 + MIR SINE MIR 219 254 -8 297 333 94 22 chr10 17570278 17570458 -122746307 - MIR3 SINE MIR -9 199 7 798 288 72 104 chr10 17572990 17573656 -122743109 + L1ME4a LINE L1 28 713 -5406 393 22 0 0 chr10 17573656 17573702 -122743063 + (CA)n Simple_repeat Simple_repeat 2 47 0 798 288 72 104 chr10 17573702 17574038 -122742727 + L1ME4a LINE L1 713 992 -5127 1959 152 3 7 chr10 17574038 17574340 -122742425 + AluSx SINE Alu 1 301 -11 798 288 72 104 chr10 17574340 17574482 -122742283 + L1ME4a LINE L1 992 1137 -4982 2235 222 48 54 chr10 17574510 17575028 -122741737 - LTR40a LTR ERVL -1 518 4 528 268 42 84 chr10 17575205 17576109 -122740656 + L1ME4a LINE L1 4608 5260 -869 2168 125 0 0 chr10 17576240 17576544 -122740221 - AluSx SINE Alu -8 304 1 2182 111 10 0 chr10 17576977 17577275 -122739490 - AluSx SINE Alu -11 301 1 299 316 18 6 chr10 17578541 17578712 -122738053 + L1ME4a LINE L1 5693 5865 -239 727 214 146 10 chr10 17579038 17579230 -122737535 - Tigger1 DNA MER2_type 0 2418 2201 539 182 250 20 chr10 17579197 17579345 -122737420 - Tigger1 DNA MER2_type -2236 182 1 * 310 355 138 5 chr10 17579446 17579663 -122737102 - MIR SINE MIR -4 258 13 1503 177 37 27 chr10 17579910 17580209 -122736556 - AluJo SINE Alu -10 302 1 1990 125 13 13 chr10 17580285 17580597 -122736168 - AluSx SINE Alu 0 312 1 449 346 21 30 chr10 17581478 17581712 -122735053 + MIR SINE MIR 9 240 -22 516 106 0 0 chr10 17582002 17582068 -122734697 - Alu SINE Alu -244 67 2 886 142 14 0 chr10 17582071 17582212 -122734553 - FRAM SINE Alu -14 162 20 291 257 88 26 chr10 17583857 17583970 -122732795 + MIR3 SINE MIR 41 160 -48 351 259 9 18 chr10 17584059 17584171 -122732594 + MER103 DNA DNA 55 165 -1 319 179 0 18 chr10 17584444 17584500 -122732265 + AluSc SINE Alu 40 94 -205 255 316 40 0 chr10 17585044 17585120 -122731645 - MIR SINE MIR -100 108 30 637 213 8 24 chr10 17585796 17585923 -122730842 + AluSq/x SINE Alu 6 130 -182 295 152 15 15 chr10 17588475 17588541 -122728224 + GA-rich Low_complexity Low_complexity 2 67 0 237 270 178 18 chr10 17589552 17589715 -122727050 + L2 LINE L2 3001 3189 -124 928 185 0 34 chr10 17591366 17591571 -122725194 - AluJb SINE Alu -29 283 86 276 316 53 0 chr10 17592289 17592384 -122724381 + MIR SINE MIR 40 139 -123 180 350 17 0 chr10 17592657 17592717 -122724048 - L2 LINE L2 -76 3196 3136 21 0 0 0 chr10 17595218 17595239 -122721526 + AT_rich Low_complexity Low_complexity 1 21 0 1150 212 3 62 chr10 17595620 17595926 -122720839 - AluJb SINE Alu -5 307 20 342 0 0 0 chr10 17596457 17596495 -122720270 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 2213 98 3 13 chr10 17598259 17598564 -122718201 - AluY SINE Alu -9 302 1 2213 113 0 3 chr10 17598571 17598873 -122717892 - AluSq SINE Alu -12 301 1 261 139 0 0 chr10 17599431 17599474 -122717291 + (T)n Simple_repeat Simple_repeat 1 43 0 333 293 87 90 chr10 17600410 17601008 -122715757 + L1M2 LINE L1 527 1122 -5727 234 116 0 0 chr10 17601365 17601408 -122715357 + (G)n Simple_repeat Simple_repeat 1 43 0 14524 171 39 10 chr10 17601420 17606456 -122710309 - L1P5 LINE L1 -360 6507 1311 2910 110 96 32 chr10 17606458 17606957 -122709808 - L1P5 LINE L1 -5708 1155 625 1142 172 0 5 chr10 17606949 17607147 -122709618 - L1P5 LINE L1 -6663 200 4 * 837 230 36 0 chr10 17607172 17607368 -122709397 + MER63 DNA MER1_type 515 717 -343 209 294 0 43 chr10 17607395 17607487 -122709278 + L2 LINE L2 3190 3277 -36 181 319 118 7 chr10 17607861 17608005 -122708760 + L2 LINE L2 3003 3162 -151 302 247 103 55 chr10 17608021 17608167 -122708598 + L2 LINE L2 3113 3265 -48 301 266 106 0 chr10 17608188 17608282 -122708483 - L2 LINE L2 -19 3294 3191 2589 118 25 35 chr10 17608610 17608999 -122707766 + MSTA LTR MaLR 1 387 -41 1716 174 3 23 chr10 17608999 17609303 -122707462 - AluSg SINE Alu -12 298 1 2589 118 25 35 chr10 17609303 17609345 -122707420 + MSTA LTR MaLR 387 428 0 891 75 42 0 chr10 17609355 17609475 -122707290 - MER75 DNA T2_type 0 514 390 735 134 89 0 chr10 17609483 17609595 -122707170 + AluSq/x SINE Alu 5 126 -187 2332 92 0 3 chr10 17609598 17609893 -122706872 + AluSc SINE Alu 3 296 -13 2673 130 8 0 chr10 17609895 17610280 -122706485 - MER75 DNA T2_type -126 388 1 258 300 86 7 chr10 17610324 17610464 -122706301 + HAL1b LINE L1 506 656 -692 960 126 0 0 chr10 17610512 17610647 -122706118 + AluJb SINE Alu 1 135 -177 757 259 30 22 chr10 17610648 17610918 -122705847 + HAL1b LINE L1 663 934 -414 * 775 183 46 11 chr10 17610917 17611092 -122705673 - L1M4 LINE L1 -833 5313 5133 1099 235 34 47 chr10 17611105 17611492 -122705273 + L1ME1 LINE L1 5724 6105 -61 373 286 25 12 chr10 17611399 17611560 -122705205 + L1MA10 LINE L1 6169 6331 -3 * 2169 108 20 7 chr10 17611608 17611913 -122704852 - AluSq SINE Alu -4 309 1 751 150 17 0 chr10 17612264 17612384 -122704381 - AluSq/x SINE Alu -183 130 9 480 73 0 0 chr10 17612392 17612460 -122704305 - AluJo SINE Alu -4 308 241 906 183 17 51 chr10 17612461 17612636 -122704129 - AluJo SINE Alu -142 170 2 238 212 48 7 chr10 17612652 17612798 -122703967 + (TATATG)n Simple_repeat Simple_repeat 4 155 0 201 94 0 0 chr10 17613623 17613655 -122703110 + (GA)n Simple_repeat Simple_repeat 2 33 0 394 279 13 3 chr10 17613774 17614082 -122702683 + GA-rich Low_complexity Low_complexity 1 311 0 814 231 138 42 chr10 17614659 17614755 -122702010 + L1ME1 LINE L1 5146 5231 -935 1892 142 0 77 chr10 17614755 17615093 -122701672 - AluSx SINE Alu 0 312 1 814 231 138 42 chr10 17615093 17615434 -122701331 + L1ME1 LINE L1 5231 5617 -549 1851 184 15 26 chr10 17615442 17615598 -122701167 + MER1B DNA MER1_type 1 157 -2555 1895 114 0 18 chr10 17615598 17615870 -122700895 - AluSq SINE Alu 0 313 47 1851 184 15 26 chr10 17615870 17616056 -122700709 + MER1B DNA MER1_type 157 339 0 1611 241 71 31 chr10 17616056 17616579 -122700186 + L1ME1 LINE L1 5619 6162 -4 2072 123 27 0 chr10 17617485 17617786 -122698979 - AluSg SINE Alu -1 309 1 511 287 0 24 chr10 17618094 17618258 -122698507 - MIR SINE MIR -74 188 29 2029 115 31 0 chr10 17618398 17618719 -122698046 + L1MA2 LINE L1 5963 6293 -11 1159 102 0 0 chr10 17618961 17619118 -122697647 + AluSg/x SINE Alu 152 308 -2 326 274 134 24 chr10 17619186 17619522 -122697243 + L1MC4 LINE L1 5591 5963 -1845 1623 175 14 27 chr10 17619692 17619984 -122696781 + AluJb SINE Alu 1 288 -24 2078 125 4 0 chr10 17620011 17620313 -122696452 + AluSx SINE Alu 1 303 0 961 146 6 6 chr10 17620396 17620554 -122696211 - L1PB3 LINE L1 -1 6153 5996 289 255 71 21 chr10 17620569 17620710 -122696055 + L1ME4a LINE L1 5969 6116 -5 545 280 77 6 chr10 17620957 17621125 -122695640 - MLT1L LTR MaLR -5 610 431 1143 101 0 6 chr10 17621669 17621828 -122694937 + AluSg/x SINE Alu 154 311 -1 913 248 102 8 chr10 17622711 17622965 -122693800 - MLT1L LTR MaLR 0 615 338 211 281 73 12 chr10 17622978 17623060 -122693705 + MIR SINE MIR 176 262 0 1397 172 33 127 chr10 17623105 17623137 -122693628 - MLT1B LTR MaLR 0 390 357 2240 115 81 0 chr10 17623137 17623484 -122693281 + THE1C LTR MaLR 1 375 0 1397 172 33 127 chr10 17623484 17623876 -122692889 - MLT1B LTR MaLR -33 357 6 255 247 12 0 chr10 17627004 17627085 -122689680 + L1MC4 LINE L1 6622 6703 -1339 897 185 0 0 chr10 17627112 17627269 -122689496 + AluJb SINE Alu 152 308 -4 318 301 23 74 chr10 17627355 17627531 -122689234 + MIR3 SINE MIR 39 205 -3 233 241 46 11 chr10 17628307 17628394 -122688371 + L2 LINE L2 2667 2756 -558 367 267 17 33 chr10 17628410 17628530 -122688235 + L2 LINE L2 3195 3312 -1 285 304 118 72 chr10 17628555 17628920 -122687845 + L2 LINE L2 2851 3240 -73 2699 100 68 0 chr10 17628920 17629331 -122687434 + L1PA13 LINE L1 5725 6163 0 285 304 118 72 chr10 17629331 17629396 -122687369 + L2 LINE L2 3240 3301 -12 2134 115 0 3 chr10 17629413 17629699 -122687066 + AluSg SINE Alu 1 285 -25 405 0 0 0 chr10 17629700 17629745 -122687020 + (TG)n Simple_repeat Simple_repeat 2 46 0 1847 167 0 0 chr10 17630391 17630690 -122686075 - AluSx SINE Alu -13 299 1 1241 230 71 40 chr10 17630951 17631404 -122685361 - MLT1C LTR MaLR 0 467 1 868 149 0 0 chr10 17631513 17631654 -122685111 - AluJo SINE Alu 0 312 172 983 135 5 125 chr10 17631865 17631939 -122684826 - AluJo SINE Alu -136 176 95 2069 133 0 13 chr10 17631939 17632247 -122684518 + AluSx SINE Alu 9 312 0 983 135 5 125 chr10 17632247 17632372 -122684393 - AluJo SINE Alu -217 95 1 248 270 0 16 chr10 17633286 17633349 -122683416 + CT-rich Low_complexity Low_complexity 4 65 0 1473 189 40 17 chr10 17633350 17633651 -122683114 - AluJb SINE Alu -4 308 1 281 241 58 11 chr10 17634200 17634287 -122682478 + MIR SINE MIR 58 148 -114 339 263 0 12 chr10 17635092 17635172 -122681593 - L2 LINE L2 -8 3305 3227 803 212 13 93 chr10 17635173 17635290 -122681475 - MER58A DNA MER1_type -2202 218 128 1891 173 0 19 chr10 17635290 17635426 -122681339 + AluSx SINE Alu 1 138 -174 2530 53 30 0 chr10 17635426 17635728 -122681037 + AluY SINE Alu 1 311 0 1891 173 0 19 chr10 17635728 17635909 -122680856 + AluSx SINE Alu 138 312 0 803 212 13 93 chr10 17635909 17636027 -122680738 - MER58A DNA MER1_type -2292 128 2 292 356 69 5 chr10 17636053 17636241 -122680524 - L2 LINE L2 -203 3110 2911 370 325 81 27 chr10 17636257 17636555 -122680210 - L2 LINE L2 -517 2797 2484 2265 88 3 14 chr10 17637393 17637690 -122679075 + AluSx SINE Alu 1 294 -18 534 284 104 67 chr10 17637904 17638180 -122678585 - L1ME4a LINE L1 -4 6117 5853 2032 125 3 7 chr10 17638180 17638475 -122678290 - AluSx SINE Alu -18 294 1 534 284 104 67 chr10 17638475 17638782 -122677983 - L1ME4a LINE L1 -268 5853 5512 926 131 42 48 chr10 17641675 17641843 -122674922 - AluJo SINE Alu -14 298 132 22 35 0 0 chr10 17641843 17641872 -122674893 + AT_rich Low_complexity Low_complexity 1 29 0 351 57 51 68 chr10 17641876 17642053 -122674712 + (TA)n Simple_repeat Simple_repeat 1 174 0 2104 128 7 0 chr10 17642053 17642342 -122674423 - AluSx SINE Alu -17 295 5 704 167 25 0 chr10 17642356 17642476 -122674289 - AluJo SINE Alu -188 124 2 1840 124 0 8 chr10 17642985 17643244 -122673521 + AluSc SINE Alu 36 292 -17 460 226 165 0 chr10 17643443 17643558 -122673207 + MLT1K LTR MaLR 25 158 -347 1871 143 29 0 chr10 17643998 17644278 -122672487 - AluSx SINE Alu -24 288 1 304 226 16 158 chr10 17644676 17644809 -122671956 + MIR SINE MIR 34 147 -69 1699 212 118 15 chr10 17645329 17645520 -122671245 + MLT1D LTR MaLR 1 171 -334 1539 176 3 54 chr10 17645520 17645833 -122670932 + AluJo SINE Alu 1 297 -15 1699 212 118 15 chr10 17645833 17646099 -122670666 + MLT1D LTR MaLR 171 505 0 341 330 11 0 chr10 17646427 17646518 -122670247 - MER74A LTR ERVL -63 495 404 1734 147 19 42 chr10 17647818 17648125 -122668640 - AluJo SINE Alu -12 300 1 288 247 24 0 chr10 17649590 17649675 -122667090 - MIR SINE MIR -59 203 117 204 271 35 35 chr10 17651878 17651963 -122664802 - MIR SINE MIR -77 185 101 550 288 88 50 chr10 17652027 17652346 -122664419 + MLT1K LTR MaLR 152 482 -106 275 292 88 0 chr10 17652529 17652642 -122664123 + L2 LINE L2 3118 3240 -73 1081 126 31 2 chr10 17653067 17653296 -122663469 - AluJb SINE Alu -14 298 21 23 33 0 0 chr10 17653546 17653576 -122663189 + AT_rich Low_complexity Low_complexity 1 30 0 570 221 71 0 chr10 17653579 17653692 -122663073 - FLAM_A SINE Alu -12 121 1 2393 120 92 2 chr10 17654247 17654640 -122662125 + MSTA LTR MaLR 1 428 0 1358 164 125 8 chr10 17655138 17655394 -122661371 - AluSg1 SINE Alu -23 286 1 736 178 0 30 chr10 17655489 17655624 -122661141 + FLAM_C SINE Alu 1 131 -2 1462 178 27 51 chr10 17656118 17656411 -122660354 - AluJo SINE Alu -26 286 1 885 161 44 0 chr10 17657184 17657364 -122659401 - MER33 DNA MER1_type -1 362 175 454 239 9 15 chr10 17657416 17657551 -122659214 - MER33 DNA MER1_type -251 73 1 2193 149 2 11 chr10 17657669 17658113 -122658652 + MER1A DNA MER1_type 4 529 0 466 224 100 65 chr10 17659195 17659365 -122657400 + MIR SINE MIR 73 248 -14 1801 163 66 37 chr10 17661524 17661921 -122654844 + L1MA2 LINE L1 5897 6304 0 22082 105 22 6 chr10 17662122 17666267 -122650498 + L1PA8 LINE L1 1960 6169 -3 332 301 7 27 chr10 17667390 17667536 -122649229 + MIR SINE MIR 79 221 -41 2404 64 0 0 chr10 17667841 17668122 -122648643 + AluY SINE Alu 15 295 -16 774 187 120 72 chr10 17668364 17668573 -122648192 + MER20 DNA MER1_type 1 219 0 2948 90 0 6 chr10 17668764 17669130 -122647635 - THE1B LTR MaLR 0 364 1 865 123 0 0 chr10 17669262 17669384 -122647381 + L1MA1 LINE L1 6181 6302 0 4782 135 29 8 chr10 17670289 17671072 -122645693 - L1PA16 LINE L1 0 6166 5367 295 233 123 0 chr10 17672876 17672949 -122643816 - MER94 DNA DNA -52 82 1 1746 175 3 22 chr10 17673300 17673614 -122643151 - AluJb SINE Alu -4 308 1 545 170 226 0 chr10 17673620 17673726 -122643039 - FLAM_C SINE Alu -10 133 4 442 280 54 42 chr10 17673827 17673995 -122642770 + MIR SINE MIR 3 172 -90 1488 297 91 10 chr10 17674015 17674698 -122642067 + MER20B DNA MER1_type 42 779 -4 2212 105 6 16 chr10 17674735 17675049 -122641716 + AluSq SINE Alu 1 311 -2 597 222 148 0 chr10 17676386 17676548 -122640217 - MER5A DNA MER1_type 0 189 4 855 130 7 22 chr10 17677333 17677471 -122639294 - FLAM_C SINE Alu -7 136 1 1606 172 26 30 chr10 17679920 17680223 -122636542 + AluJb SINE Alu 1 302 -10 876 211 22 0 chr10 17680286 17680471 -122636294 - MER20 DNA MER1_type -1 218 30 450 298 35 7 chr10 17680870 17681011 -122635754 + L3 LINE CR1 1425 1569 -8 303 269 87 0 chr10 17681965 17682069 -122634696 - MIR3 SINE MIR -7 201 89 764 222 148 14 chr10 17682231 17682447 -122634318 + L1ME LINE L1 5559 5803 -361 2897 289 125 21 chr10 17682555 17683967 -122632798 + L2 LINE L2 1277 2834 -480 451 267 337 0 chr10 17683996 17684284 -122632481 + L2 LINE L2 2929 3313 0 263 293 12 0 chr10 17685436 17685518 -122631247 - MER103 DNA DNA -1 165 83 260 218 0 36 chr10 17687379 17687434 -122629331 + polypurine Low_complexity Low_complexity 4 56 0 428 315 210 6 chr10 17687606 17687949 -122628816 + L2 LINE L2 2562 2974 -340 1105 101 13 0 chr10 17688291 17688440 -122628325 + L1PA10 LINE L1 6018 6168 0 1520 117 0 14 chr10 17688558 17688780 -122627985 + AluSg/x SINE Alu 84 302 -8 24 0 0 0 chr10 17690711 17690735 -122626030 + AT_rich Low_complexity Low_complexity 1 24 0 412 215 6 153 chr10 17690893 17691056 -122625709 + MIR SINE MIR 66 204 -58 1572 139 9 104 chr10 17691101 17691417 -122625348 - MER2 DNA MER2_type -58 287 2 449 346 21 30 chr10 17691676 17691910 -122624855 - MIR SINE MIR -22 240 9 2216 101 7 0 chr10 17692791 17693088 -122623677 + AluSx SINE Alu 1 299 -13 253 273 23 0 chr10 17693136 17693224 -122623541 + L1MC4 LINE L1 6614 6703 -1339 323 311 0 0 chr10 17693232 17693322 -122623443 + L1MC4 LINE L1 6614 6703 -1339 276 30 0 0 chr10 17693326 17693359 -122623406 + (CA)n Simple_repeat Simple_repeat 2 34 0 418 132 22 15 chr10 17694028 17694117 -122622648 + L1P1 LINE L1 5374 5466 -689 1935 175 28 50 chr10 17694131 17694245 -122622520 + L1MB8 LINE L1 5419 5534 -644 2083 113 17 3 chr10 17694245 17694536 -122622229 - AluSc SINE Alu -14 295 1 1935 175 28 50 chr10 17694536 17694843 -122621922 + L1MB8 LINE L1 5534 5831 -347 1347 165 26 11 chr10 17694844 17695117 -122621648 + L1MB8 LINE L1 5902 6178 0 1651 173 0 53 chr10 17695206 17695529 -122621236 - AluJo SINE Alu -5 307 2 342 0 0 0 chr10 17696041 17696079 -122620686 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 2396 82 0 7 chr10 17697841 17698145 -122618620 - AluY SINE Alu -9 302 1 180 0 0 0 chr10 17699657 17699677 -122617088 + (A)n Simple_repeat Simple_repeat 1 20 0 474 186 132 23 chr10 17699729 17699816 -122616949 + L1ME2 LINE L1 6022 6129 -35 183 42 0 0 chr10 17699816 17699840 -122616925 + (CA)n Simple_repeat Simple_repeat 2 25 0 474 186 132 23 chr10 17699840 17699881 -122616884 + L1ME2 LINE L1 6129 6164 0 1810 162 17 3 chr10 17699947 17700243 -122616522 - AluJb SINE Alu -12 300 1 266 290 90 10 chr10 17700505 17700605 -122616160 - MIR SINE MIR -102 160 53 2095 133 0 0 chr10 17701265 17701559 -122615206 - AluSq SINE Alu -11 302 9 2368 66 0 40 chr10 17701652 17701954 -122614811 + AluY SINE Alu 1 290 -21 1947 235 24 49 chr10 17701956 17702551 -122614214 + L1ME1 LINE L1 5597 6334 0 326 292 11 0 chr10 17702559 17702648 -122614117 - MIR SINE MIR -160 102 13 22 0 0 0 chr10 17704035 17704057 -122612708 + AT_rich Low_complexity Low_complexity 1 22 0 341 260 305 24 chr10 17704116 17704362 -122612403 - L2 LINE L2 -10 3303 2989 2090 112 0 3 chr10 17704407 17704693 -122612072 + AluSx SINE Alu 23 307 -5 1140 139 35 0 chr10 17704693 17704866 -122611899 + AluSg/x SINE Alu 132 310 0 267 261 54 9 chr10 17705473 17705584 -122611181 + L1MC3 LINE L1 6708 6823 -962 1173 167 50 14 chr10 17705795 17705807 -122610958 - MER46A DNA MER2_type -2495 236 226 2685 113 3 45 chr10 17705807 17706187 -122610578 - THE1B LTR MaLR 0 364 1 1173 167 50 14 chr10 17706187 17706395 -122610370 - MER46A DNA MER2_type -2505 226 8 454 188 101 54 chr10 17706276 17706425 -122610340 + MER46A DNA MER2_type 11 166 -70 * 1318 111 6 0 chr10 17706678 17706858 -122609907 + AluSp SINE Alu 125 305 -8 2205 123 3 0 chr10 17707417 17707718 -122609047 + AluSx SINE Alu 1 302 -10 255 137 98 0 chr10 17707775 17707826 -122608939 + L2 LINE L2 3217 3272 0 1718 154 32 4 chr10 17708293 17708572 -122608193 - AluJo SINE Alu -25 287 1 2628 43 0 3 chr10 17708911 17709216 -122607549 - AluY SINE Alu -7 304 1 306 291 75 8 chr10 17709334 17709468 -122607297 + MIR SINE MIR 112 254 -8 704 248 78 59 chr10 17709663 17710109 -122606656 + MLT1E LTR MaLR 2 537 -30 226 245 21 64 chr10 17710206 17710300 -122606465 + MIR SINE MIR 118 207 -55 2188 118 30 3 chr10 17710384 17710688 -122606077 - AluSx SINE Alu 0 312 1 361 304 63 47 chr10 17710697 17711059 -122605706 + L1ME2 LINE L1 5585 5952 -212 238 219 86 29 chr10 17711399 17711504 -122605261 + L1ME LINE L1 5643 5753 -368 357 244 98 12 chr10 17711690 17711854 -122604911 + AluJb SINE Alu 105 282 -20 354 280 105 41 chr10 17711954 17712365 -122604400 - L2 LINE L2 -1022 2292 1856 31 0 0 0 chr10 17713480 17713511 -122603254 + AT_rich Low_complexity Low_complexity 1 31 0 2256 93 0 35 chr10 17713717 17714027 -122602738 - AluSq SINE Alu -14 299 1 2292 103 0 0 chr10 17714657 17714949 -122601816 + AluSc SINE Alu 1 292 -17 855 201 5 0 chr10 17716257 17716645 -122600120 + CT-rich Low_complexity Low_complexity 1 390 0 2118 141 0 0 chr10 17717558 17717849 -122598916 + AluSx SINE Alu 6 296 -16 237 287 50 0 chr10 17718347 17718448 -122598317 + MIR SINE MIR 38 143 -119 25 31 0 0 chr10 17718712 17718744 -122598021 + AT_rich Low_complexity Low_complexity 1 32 0 202 338 38 45 chr10 17719009 17719142 -122597623 - L2 LINE L2 -604 2710 2579 216 344 33 17 chr10 17719288 17719468 -122597297 - L2 LINE L2 -899 2415 2233 541 154 0 0 chr10 17719593 17719671 -122597094 - AluJ/FLAM SINE Alu -233 79 2 2995 151 0 8 chr10 17720427 17720911 -122595854 - L1PA15 LINE L1 -3 6162 5683 346 294 108 5 chr10 17721018 17721212 -122595553 - MIR SINE MIR -1 261 48 1618 83 208 0 chr10 17721377 17721618 -122595147 - AluSg1 SINE Alu -18 291 1 2676 140 4 42 chr10 17721620 17722071 -122594694 + Tigger2a DNA MER2_type 1 434 0 2393 104 0 0 chr10 17722569 17722877 -122593888 - AluSc SINE Alu -1 308 1 1669 184 3 10 chr10 17722911 17723210 -122593555 - AluJb SINE Alu -5 307 11 520 258 65 70 chr10 17723220 17723937 -122592828 - L1MEd LINE L1 -4325 2216 1229 4233 176 70 4 chr10 17724094 17724867 -122591898 + LTR1B LTR ERV1 1 824 -2 9375 91 5 2 chr10 17725724 17727800 -122588965 + L1PA7 LINE L1 4073 6152 -2 1267 185 163 135 chr10 17728024 17728132 -122588633 + LTR1B LTR ERV1 82 186 -640 369 0 0 0 chr10 17728132 17728173 -122588592 + (CA)n Simple_repeat Simple_repeat 2 42 0 1267 185 163 135 chr10 17728173 17728789 -122587976 + LTR1B LTR ERV1 186 826 0 341 265 110 68 chr10 17729023 17729242 -122587523 + MLT1L LTR MaLR 214 441 -174 26 0 0 0 chr10 17729851 17729877 -122586888 + AT_rich Low_complexity Low_complexity 1 26 0 210 37 0 0 chr10 17730232 17730259 -122586506 + (TG)n Simple_repeat Simple_repeat 2 28 0 695 289 24 0 chr10 17730351 17730559 -122586206 + MIR SINE MIR 46 258 -4 3825 165 106 13 chr10 17732009 17732765 -122584000 + LTR1B LTR ERV1 1 826 0 292 318 27 27 chr10 17735248 17735396 -122581369 + MIR SINE MIR 45 192 -70 533 226 24 8 chr10 17735474 17735598 -122581167 - L2 LINE L2 -1 3312 3187 261 182 31 75 chr10 17735737 17735971 -122580794 + (TTATA)n Simple_repeat Simple_repeat 1 223 0 238 250 48 12 chr10 17735901 17736069 -122580696 + (TA)n Simple_repeat Simple_repeat 2 175 0 * 276 350 102 0 chr10 17737707 17737893 -122578872 - MIR SINE MIR -54 208 4 186 43 0 0 chr10 17738083 17738106 -122578659 + (T)n Simple_repeat Simple_repeat 1 23 0 5712 51 0 0 chr10 17738174 17738862 -122577903 + L1PA5 LINE L1 5467 6154 0 1032 81 0 22 chr10 17740127 17740263 -122576502 - AluSq/x SINE Alu -180 133 1 493 59 0 2 chr10 17740505 17740568 -122576197 + L1PA4 LINE L1 6057 6135 -28 2148 135 0 3 chr10 17741266 17741569 -122575196 + AluSx SINE Alu 1 302 -10 182 329 155 12 chr10 17741781 17741942 -122574823 + MIR SINE MIR 76 259 -3 796 143 30 30 chr10 17741955 17742088 -122574677 - FLAM_C SINE Alu 0 133 1 21 36 0 0 chr10 17742277 17742305 -122574460 + AT_rich Low_complexity Low_complexity 1 28 0 220 292 65 38 chr10 17742308 17742472 -122574293 - MIR SINE MIR -61 201 34 2235 108 0 3 chr10 17743614 17743910 -122572855 + AluSc SINE Alu 1 295 -14 1727 214 55 9 chr10 17744612 17745051 -122571714 + MLT1C LTR MaLR 6 464 -3 276 326 21 57 chr10 17747185 17747326 -122569439 + MIR SINE MIR 48 183 -79 4936 95 1 36 chr10 17747336 17748049 -122568716 - LTR12 LTR ERV1 0 688 1 329 348 59 24 chr10 17750792 17751131 -122565634 + L2 LINE L2 2185 2535 -779 1943 134 39 0 chr10 17751135 17751418 -122565347 - AluSg SINE Alu -16 294 1 797 205 62 22 chr10 17751701 17751925 -122564840 - MER106A DNA MER1_type -1 235 3 296 359 16 47 chr10 17751953 17752145 -122564620 + L2 LINE L2 2914 3099 -173 2170 132 35 51 chr10 17752236 17752631 -122564134 + MLT1B LTR MaLR 1 389 -1 1593 196 18 0 chr10 17754340 17754621 -122562144 + AluJb SINE Alu 7 292 -20 298 0 48 0 chr10 17754692 17754734 -122562031 + (TG)n Simple_repeat Simple_repeat 2 45 0 257 0 30 0 chr10 17754796 17754829 -122561936 + (TG)n Simple_repeat Simple_repeat 2 35 0 333 0 0 0 chr10 17754890 17754927 -122561838 + (TG)n Simple_repeat Simple_repeat 1 37 0 545 305 47 60 chr10 17755009 17755389 -122561376 + L2 LINE L2 2898 3272 0 562 262 12 24 chr10 17756069 17756237 -122560528 + MER5B DNA MER1_type 8 173 -5 423 193 23 0 chr10 17756462 17756550 -122560215 + MER5A DNA MER1_type 4 93 -96 1652 201 7 0 chr10 17756821 17757129 -122559636 + AluJo SINE Alu 1 310 0 5531 70 113 0 chr10 17757650 17758392 -122558373 - LTR12 LTR ERV1 0 826 1 4733 93 1 15 chr10 17758392 17759045 -122557720 - HERV9 LTR ERV1 0 8399 7756 2118 177 91 77 chr10 17759039 17759964 -122556801 - Harlequin LTR ERV1 -5176 1720 842 * 35684 89 29 6 chr10 17759933 17764737 -122552028 - Harlequin LTR ERV1 -3425 4974 58 4978 68 224 0 chr10 17764761 17765436 -122551329 - LTR12 LTR ERV1 0 826 1 931 180 87 0 chr10 17765436 17765608 -122551157 - MER5A DNA MER1_type -2 187 1 939 92 0 0 chr10 17766825 17766945 -122549820 - L1MA2 LINE L1 0 6304 6185 304 269 81 94 chr10 17766958 17767192 -122549573 - L1ME4a LINE L1 -22 6099 5869 515 300 78 40 chr10 17767322 17767669 -122549096 - L1ME4a LINE L1 -460 5661 5302 182 261 60 97 chr10 17767802 17767936 -122548829 + L2 LINE L2 1398 1526 -1788 293 143 0 0 chr10 17769323 17769365 -122547400 + LTR7 LTR ERV1 1 42 -408 1899 151 6 22 chr10 17770954 17771266 -122545499 - AluJb SINE Alu -5 307 1 484 370 19 0 chr10 17771822 17772030 -122544735 + MIR SINE MIR 33 244 -18 2089 118 10 7 chr10 17772811 17773115 -122543650 + AluSx SINE Alu 1 305 -7 288 286 166 29 chr10 17773645 17773953 -122542812 + L1ME4a LINE L1 5661 6010 -111 22 30 0 61 chr10 17774318 17774366 -122542399 + AT_rich Low_complexity Low_complexity 1 46 -16 632 103 10 0 chr10 17774366 17774463 -122542302 + L1MA2 LINE L1 6207 6304 0 22 30 0 61 chr10 17774463 17774480 -122542285 + AT_rich Low_complexity Low_complexity 46 62 0 360 0 0 0 chr10 17774687 17774727 -122542038 + (TTA)n Simple_repeat Simple_repeat 3 42 0 2122 132 0 0 chr10 17774903 17775214 -122541551 + AluSx SINE Alu 2 312 0 2582 117 10 18 chr10 17776438 17776824 -122539941 + MER1A DNA MER1_type 147 529 0 364 266 166 0 chr10 17776876 17777015 -122539750 - MIR SINE MIR -4 258 97 2113 117 0 0 chr10 17777100 17777405 -122539360 + AluSx SINE Alu 1 305 0 581 228 169 22 chr10 17777786 17777970 -122538795 - MIR SINE MIR 0 262 52 411 246 140 3 chr10 17778753 17778881 -122537884 - MIR SINE MIR -62 146 12 220 287 180 43 chr10 17779345 17779718 -122537047 + L2 LINE L2 2465 2888 -426 315 243 88 88 chr10 17781004 17781140 -122535625 - MER5B DNA MER1_type -36 153 4 229 210 120 40 chr10 17781468 17781568 -122535197 - L1M4 LINE L1 -917 5229 5122 2208 126 0 0 chr10 17782360 17782662 -122534103 + AluSq SINE Alu 1 302 -11 266 290 90 10 chr10 17783322 17783422 -122533343 + MIR SINE MIR 53 160 -102 1810 162 17 3 chr10 17783684 17783980 -122532785 + AluJb SINE Alu 1 300 -12 474 186 132 23 chr10 17784046 17784087 -122532678 - L1ME2 LINE L1 0 6164 6129 183 42 0 0 chr10 17784087 17784111 -122532654 + (TG)n Simple_repeat Simple_repeat 2 25 0 474 186 132 23 chr10 17784111 17784198 -122532567 - L1ME2 LINE L1 -35 6129 6022 180 0 0 0 chr10 17784250 17784270 -122532495 + (T)n Simple_repeat Simple_repeat 1 20 0 2396 82 0 7 chr10 17785782 17786086 -122530679 + AluY SINE Alu 1 302 -9 342 0 0 0 chr10 17787848 17787886 -122528879 + (TTTA)n Simple_repeat Simple_repeat 1 38 0 1651 173 0 53 chr10 17788398 17788721 -122528044 + AluJo SINE Alu 2 307 -5 1347 165 26 11 chr10 17788810 17789083 -122527682 - L1MB8 LINE L1 0 6178 5902 1935 175 28 50 chr10 17789084 17789391 -122527374 - L1MB8 LINE L1 -347 5831 5534 2083 113 17 3 chr10 17789391 17789682 -122527083 + AluSc SINE Alu 1 295 -14 1935 175 28 50 chr10 17789682 17789796 -122526969 - L1MB8 LINE L1 -644 5534 5419 418 132 22 15 chr10 17789810 17789899 -122526866 - L1P1 LINE L1 -689 5466 5374 372 159 0 0 chr10 17790565 17790571 -122526194 + (TA)n Simple_repeat Simple_repeat 1 6 -63 267 31 0 0 chr10 17790571 17790603 -122526162 + (TG)n Simple_repeat Simple_repeat 1 32 0 372 159 0 0 chr10 17790603 17790665 -122526100 + (TA)n Simple_repeat Simple_repeat 5 69 0 229 300 0 0 chr10 17790665 17790755 -122526010 - L1MC4 LINE L1 -1339 6703 6614 206 140 0 60 chr10 17790768 17790818 -122525947 + (TA)n Simple_repeat Simple_repeat 1 47 0 2181 101 7 3 chr10 17790848 17791146 -122525619 - AluSx SINE Alu -13 299 1 449 346 21 30 chr10 17792027 17792261 -122524504 + MIR SINE MIR 9 240 -22 1572 139 9 104 chr10 17792520 17792836 -122523929 + MER2 DNA MER2_type 2 287 -58 412 215 6 153 chr10 17792881 17793044 -122523721 - MIR SINE MIR -58 204 66 24 0 0 0 chr10 17793202 17793226 -122523539 + AT_rich Low_complexity Low_complexity 1 24 0 1520 117 0 14 chr10 17795157 17795379 -122521386 - AluSg/x SINE Alu -8 302 84 1105 101 13 0 chr10 17795497 17795646 -122521119 - L1PA10 LINE L1 0 6168 6018 428 315 210 6 chr10 17795988 17796331 -122520434 - L2 LINE L2 -340 2974 2562 260 218 0 36 chr10 17796503 17796558 -122520207 + polypyrimidine Low_complexity Low_complexity 4 56 0 263 293 12 0 chr10 17798419 17798501 -122518264 + MER103 DNA DNA 83 165 -1 451 267 337 0 chr10 17799653 17799941 -122516824 - L2 LINE L2 0 3313 2929 2897 289 125 21 chr10 17799970 17801382 -122515383 - L2 LINE L2 -480 2834 1277 764 222 148 14 chr10 17801490 17801706 -122515059 - L1ME LINE L1 -361 5803 5559 303 269 87 0 chr10 17801868 17801972 -122514793 + MIR3 SINE MIR 89 201 -7 450 298 35 7 chr10 17802926 17803067 -122513698 - L3 LINE CR1 -8 1569 1425 876 211 22 0 chr10 17803465 17803650 -122513115 + MER20 DNA MER1_type 30 218 -1 1606 172 26 30 chr10 17803713 17804016 -122512749 - AluJb SINE Alu -10 302 1 855 130 7 22 chr10 17806465 17806603 -122510162 + FLAM_C SINE Alu 1 136 -7 597 222 148 0 chr10 17807388 17807550 -122509215 + MER5A DNA MER1_type 4 189 0 2212 105 6 16 chr10 17808887 17809201 -122507564 - AluSq SINE Alu -2 311 1 1488 297 91 10 chr10 17809238 17809921 -122506844 - MER20B DNA MER1_type -4 779 42 442 280 54 42 chr10 17809941 17810109 -122506656 - MIR SINE MIR -90 172 3 545 170 226 0 chr10 17810210 17810316 -122506449 + FLAM_C SINE Alu 4 133 -10 1746 175 3 22 chr10 17810322 17810636 -122506129 + AluJb SINE Alu 1 308 -4 295 233 123 0 chr10 17810987 17811060 -122505705 + MER94 DNA DNA 1 82 -52 4782 135 29 8 chr10 17812864 17813647 -122503118 + L1PA16 LINE L1 5367 6166 0 865 123 0 0 chr10 17814553 17814675 -122502090 - L1MA1 LINE L1 0 6302 6181 2948 90 0 6 chr10 17814807 17815173 -122501592 + THE1B LTR MaLR 1 364 0 774 187 120 72 chr10 17815364 17815573 -122501192 - MER20 DNA MER1_type 0 219 1 2320 71 0 3 chr10 17815815 17816097 -122500668 - AluY SINE Alu -16 295 15 332 301 7 27 chr10 17816404 17816550 -122500215 - MIR SINE MIR -41 221 79 15818 103 31 16 chr10 17817673 17820849 -122495916 - L1PA8 LINE L1 -5 6167 2958 527 65 0 0 chr10 17821880 17821942 -122494823 + Alu SINE Alu 2 63 -255 1997 140 0 34 chr10 17822089 17822439 -122494326 + AluSx SINE Alu 1 339 0 2144 125 0 0 chr10 17822876 17823171 -122493594 - AluSx SINE Alu -17 295 1 215 287 111 50 chr10 17823209 17823390 -122493375 - L2 LINE L2 -17 3296 3105 644 298 13 14 chr10 17823396 17823581 -122493184 + MIR SINE MIR 2 180 -62 199 321 7 102 chr10 17823664 17823801 -122492964 - L2 LINE L2 -219 3053 2930 285 350 81 0 chr10 17823815 17823938 -122492827 + MIR3 SINE MIR 73 205 -3 206 380 28 42 chr10 17824577 17824719 -122492046 - MIR3 SINE MIR -53 155 16 2155 56 0 4 chr10 17824987 17825256 -122491509 - L1PA10 LINE L1 -189 5979 5712 214 359 88 19 chr10 17825946 17826105 -122490660 + L2 LINE L2 2237 2406 -908 2108 124 0 3 chr10 17826158 17826449 -122490316 - AluSq SINE Alu -23 290 1 718 130 0 7 chr10 17826478 17826607 -122490158 + L1P4 LINE L1 5656 5780 -386 765 125 0 10 chr10 17826607 17826711 -122490054 - FLAM_C SINE Alu -24 119 17 366 207 99 9 chr10 17826712 17826823 -122489942 - L1MC5 LINE L1 -1103 6858 6738 980 191 0 0 chr10 17826835 17826997 -122489768 - FRAM SINE Alu -15 161 1 2197 115 0 7 chr10 17827005 17827309 -122489456 - AluSc SINE Alu -7 302 1 2024 225 23 62 chr10 17827368 17827400 -122489365 + L1ME1 LINE L1 5572 5604 -730 2378 63 0 40 chr10 17827400 17827702 -122489063 + AluY SINE Alu 1 290 -21 2024 225 23 62 chr10 17827702 17828299 -122488466 + L1ME1 LINE L1 5604 6334 0 326 292 11 0 chr10 17828307 17828396 -122488369 - MIR SINE MIR -160 102 13 22 0 0 0 chr10 17829783 17829805 -122486960 + AT_rich Low_complexity Low_complexity 1 22 0 341 260 305 24 chr10 17829864 17830110 -122486655 - L2 LINE L2 -10 3303 2989 2090 112 0 3 chr10 17830155 17830441 -122486324 + AluSx SINE Alu 23 307 -5 1140 139 35 0 chr10 17830441 17830614 -122486151 + AluSg/x SINE Alu 134 312 0 267 261 54 9 chr10 17831221 17831332 -122485433 + L1MC3 LINE L1 6708 6823 -962 1231 167 48 13 chr10 17831543 17831555 -122485210 - MER46A DNA MER2_type -2495 236 226 2685 113 3 45 chr10 17831555 17831935 -122484830 - THE1B LTR MaLR 0 364 1 1231 167 48 13 chr10 17831935 17832150 -122484615 - MER46A DNA MER2_type -2505 226 1 225 97 0 0 chr10 17832191 17832222 -122484543 + Tigger4(Zombi) DNA MER2_type 1 31 -2700 298 377 36 7 chr10 17834910 17835048 -122481717 - L2 LINE L2 -220 3052 2911 2280 118 0 0 chr10 17835253 17835559 -122481206 - AluSx SINE Alu 0 312 7 200 264 0 28 chr10 17835746 17835785 -122480980 + A-rich Low_complexity Low_complexity 1 39 -31 2838 128 21 26 chr10 17835785 17836213 -122480552 - MSTB LTR MaLR 0 426 1 200 264 0 28 chr10 17836213 17836245 -122480520 + A-rich Low_complexity Low_complexity 39 70 0 228 337 20 0 chr10 17837006 17837104 -122479661 - MIR3 SINE MIR -14 194 95 24 77 0 0 chr10 17837190 17837242 -122479523 + AT_rich Low_complexity Low_complexity 1 52 0 3502 130 47 6 chr10 17837594 17837916 -122478849 + MER41C LTR ERV1 3 357 -197 339 25 0 0 chr10 17837916 17837956 -122478809 + (CA)n Simple_repeat Simple_repeat 1 40 0 3502 130 47 6 chr10 17837956 17838163 -122478602 + MER41C LTR ERV1 357 554 0 239 0 32 0 chr10 17838537 17838568 -122478197 + (TG)n Simple_repeat Simple_repeat 2 33 0 1456 157 72 96 chr10 17838984 17839003 -122477762 + MLT1B LTR MaLR 37 55 -335 4755 131 26 53 chr10 17839003 17839800 -122476965 - MER4E LTR ERV1 -3 776 1 1456 157 72 96 chr10 17839800 17840143 -122476622 + MLT1B LTR MaLR 55 390 0 2068 125 0 7 chr10 17840349 17840637 -122476128 + AluSx SINE Alu 1 286 -26 4396 102 2 0 chr10 17840673 17841224 -122475541 - MER41A LTR ERV1 0 554 3 1851 157 0 11 chr10 17843098 17843406 -122473359 - AluJb SINE Alu 0 305 1 2205 91 0 10 chr10 17843708 17844006 -122472759 + AluY SINE Alu 1 295 -16 1649 171 0 37 chr10 17844102 17844423 -122472342 + AluJo SINE Alu 1 309 -3 2083 108 0 69 chr10 17847106 17847441 -122469324 - AluSx SINE Alu 0 312 1 1953 120 38 7 chr10 17848346 17848637 -122468128 - AluSx SINE Alu -12 300 1 1717 163 14 10 chr10 17848965 17849254 -122467511 + AluJo SINE Alu 1 290 -22 32 0 0 0 chr10 17849254 17849286 -122467479 + AT_rich Low_complexity Low_complexity 1 32 0 1597 186 3 26 chr10 17849951 17850262 -122466503 - AluJo SINE Alu -8 304 1 315 270 80 10 chr10 17851104 17851204 -122465561 - MIR SINE MIR -70 192 86 2036 125 6 22 chr10 17852758 17853071 -122463694 + AluSx SINE Alu 1 308 -4 288 0 0 0 chr10 17853371 17853403 -122463362 + (T)n Simple_repeat Simple_repeat 1 32 0 257 279 85 31 chr10 17856129 17856258 -122460507 + L1ME4a LINE L1 5716 5851 -391 4013 200 19 1 chr10 17857511 17858247 -122458518 + MSTA-int LTR MaLR 903 1651 0 2584 157 26 9 chr10 17858247 17858668 -122458097 + MSTA LTR MaLR 1 428 0 1519 234 57 41 chr10 17858669 17859160 -122457605 + L1ME4a LINE L1 5491 5989 -132 297 211 53 0 chr10 17859160 17859236 -122457529 + L1ME4a LINE L1 5940 6019 -102 637 244 116 6 chr10 17859282 17859446 -122457319 - MER5A DNA MER1_type 0 189 8 26 74 0 0 chr10 17859470 17859524 -122457241 + AT_rich Low_complexity Low_complexity 1 54 0 423 353 25 47 chr10 17859637 17859872 -122456893 - MIR SINE MIR -13 249 20 22 0 0 0 chr10 17860068 17860090 -122456675 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 17860169 17860191 -122456574 + AT_rich Low_complexity Low_complexity 1 22 0 1803 207 23 10 chr10 17860230 17860621 -122456144 - L1MB3 LINE L1 -2 6181 5786 1276 195 69 36 chr10 17860621 17860852 -122455913 + MER2 DNA MER2_type 1 223 -122 2218 112 3 31 chr10 17860852 17861173 -122455592 - AluSx SINE Alu 0 312 1 1276 195 69 36 chr10 17861173 17861205 -122455560 + MER2 DNA MER2_type 223 252 -93 695 202 34 0 chr10 17861205 17861324 -122455441 - FLAM_A SINE Alu -10 123 1 1276 195 69 36 chr10 17861324 17861393 -122455372 + MER2 DNA MER2_type 252 345 0 2069 195 90 16 chr10 17861393 17861945 -122454820 - L1MB3 LINE L1 -396 5787 5195 4664 174 36 19 chr10 17861977 17863510 -122453255 - L1MA6 LINE L1 -6 6996 5443 1687 169 57 6 chr10 17863526 17863875 -122452890 - Tigger2a DNA MER2_type -67 367 1 9943 221 61 30 chr10 17863875 17864384 -122452381 - L1MA6 LINE L1 -1404 5444 4952 7421 32 21 0 chr10 17864384 17865317 -122451448 - L1PA4 LINE L1 0 6155 5213 9943 221 61 30 chr10 17865317 17866051 -122450714 - L1MA6 LINE L1 -1896 4952 4242 2906 79 2 5 chr10 17866051 17866444 -122450321 - L1PA7 LINE L1 0 6154 5763 9943 221 61 30 chr10 17866444 17869443 -122447322 - L1MA6 LINE L1 -2606 4242 1370 939 303 91 30 chr10 17870024 17870631 -122446134 - L1MA6 LINE L1 -6132 717 74 * 2447 226 12 8 chr10 17870629 17871279 -122445486 - L1M4 LINE L1 -934 5212 4560 261 139 0 0 chr10 17873482 17873525 -122443240 + (A)n Simple_repeat Simple_repeat 1 43 0 2217 113 0 3 chr10 17874083 17874385 -122442380 + AluSq SINE Alu 1 301 -12 1638 157 6 62 chr10 17874392 17874716 -122442049 + AluJo SINE Alu 1 306 -6 189 288 109 49 chr10 17874888 17875072 -122441693 + L2 LINE L2 3026 3220 -93 276 316 53 0 chr10 17875360 17875455 -122441310 - MIR SINE MIR -123 139 40 1149 181 0 5 chr10 17876171 17876410 -122440355 + AluJb SINE Alu 86 323 0 569 237 144 21 chr10 17877149 17877343 -122439422 + MIR SINE MIR 43 260 -2 1795 130 59 15 chr10 17877383 17877707 -122439058 + MER44D DNA MER2_type 2 609 0 352 327 12 36 chr10 17877825 17877993 -122438772 - L2 LINE L2 -927 2387 2224 267 236 0 0 chr10 17878137 17878209 -122438556 + (TA)n Simple_repeat Simple_repeat 1 72 0 303 333 0 0 chr10 17878216 17878306 -122438459 + L1MC4 LINE L1 6614 6703 -1339 207 204 0 0 chr10 17878306 17878350 -122438415 + (TA)n Simple_repeat Simple_repeat 2 45 0 310 333 0 0 chr10 17878350 17878440 -122438325 + L1MC4 LINE L1 6614 6703 -1339 2313 96 0 7 chr10 17879323 17879625 -122437140 - AluSq SINE Alu -13 300 1 678 276 67 41 chr10 17880220 17880564 -122436201 + L1ME3A LINE L1 5808 6160 -10 294 296 62 62 chr10 17880607 17880810 -122435955 + HAL1b LINE L1 345 550 -798 970 205 22 119 chr10 17880810 17881214 -122435551 + MLT1A1 LTR MaLR 1 365 0 294 296 62 62 chr10 17881214 17881318 -122435447 + HAL1b LINE L1 549 652 -696 257 227 30 0 chr10 17881360 17881426 -122435339 + (TA)n Simple_repeat Simple_repeat 1 68 0 2349 91 3 0 chr10 17881650 17881947 -122434818 - AluSc SINE Alu -11 298 1 1851 231 52 8 chr10 17883949 17884429 -122432336 + MLT1D LTR MaLR 1 501 -4 2357 144 31 9 chr10 17885292 17885715 -122431050 - MSTB1 LTR MaLR 0 432 1 236 254 174 65 chr10 17885764 17886039 -122430726 + MLT1H LTR MaLR 245 549 0 1929 124 28 14 chr10 17886213 17886496 -122430269 - AluSg SINE Alu -23 287 1 1594 55 0 5 chr10 17886630 17886829 -122429936 + AluY SINE Alu 101 298 -13 409 308 91 29 chr10 17886829 17887203 -122429562 - L1ME LINE L1 -412 5709 5313 1602 221 48 8 chr10 17887672 17888030 -122428735 + MLT1A2 LTR MaLR 3 374 0 270 252 147 49 chr10 17888269 17888412 -122428353 + MIR SINE MIR 13 169 -93 1919 140 0 52 chr10 17888591 17888919 -122427846 + AluSx SINE Alu 1 311 -1 1616 158 83 70 chr10 17890150 17890535 -122426230 + MLT1B LTR MaLR 1 390 0 268 326 54 46 chr10 17890878 17890919 -122425846 + L1MEc LINE L1 274 313 -6250 2567 95 24 11 chr10 17890919 17891289 -122425476 - THE1C LTR MaLR 0 375 1 268 326 54 46 chr10 17891289 17891615 -122425150 + L1MEc LINE L1 313 644 -5919 440 250 48 108 chr10 17891825 17892388 -122424377 + L1MEc LINE L1 796 1324 -5239 312 291 101 14 chr10 17892426 17892574 -122424191 + L1MEc LINE L1 1174 1334 -5050 612 257 51 36 chr10 17892846 17893177 -122423588 + L1MEc LINE L1 1743 2078 -4485 828 236 113 25 chr10 17893226 17893547 -122423218 + L1MEc LINE L1 2926 3296 -3086 2161 105 0 16 chr10 17893547 17893851 -122422914 + AluY SINE Alu 1 299 -12 828 236 113 25 chr10 17893851 17893961 -122422804 + L1MEc LINE L1 3296 3395 -2987 5694 73 0 3 chr10 17894090 17894829 -122421936 - L1PA8 LINE L1 -16 6156 5420 1287 52 0 0 chr10 17894841 17894995 -122421770 - AluY SINE Alu 0 311 158 2179 105 27 0 chr10 17894997 17895293 -122421472 - AluSp SINE Alu -9 304 1 3899 227 148 10 chr10 17895311 17896743 -122420022 + L1MEc LINE L1 3648 5277 -1105 548 217 36 18 chr10 17896738 17896904 -122419861 + L1MB8 LINE L1 5979 6147 -31 * 514 311 44 17 chr10 17897052 17897232 -122419533 - L2 LINE L2 -558 2756 2572 25 0 0 0 chr10 17897988 17898013 -122418752 + AT_rich Low_complexity Low_complexity 1 25 0 241 209 176 55 chr10 17898696 17898787 -122417978 + MIR SINE MIR 45 146 -62 1728 188 7 7 chr10 17899232 17899541 -122417224 + AluJo SINE Alu 1 309 -3 189 107 0 0 chr10 17900002 17900030 -122416735 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 367 265 73 20 chr10 17900602 17900753 -122416012 - MIR SINE MIR -5 257 99 2010 123 27 30 chr10 17900759 17901124 -122415641 - THE1B LTR MaLR 0 364 1 295 191 67 34 chr10 17901131 17901220 -122415545 - MIR SINE MIR -170 92 1 207 0 0 0 chr10 17902048 17902071 -122414694 + (T)n Simple_repeat Simple_repeat 1 23 0 1491 241 95 62 chr10 17902550 17903145 -122413620 + L2 LINE L2 2094 2713 -601 1642 188 0 3 chr10 17903145 17903427 -122413338 + AluJo SINE Alu 13 293 -19 1491 241 95 62 chr10 17903427 17903475 -122413290 + L2 LINE L2 2713 2758 -556 1751 209 60 28 chr10 17903476 17903945 -122412820 - MLT1D LTR MaLR 0 505 22 691 238 175 21 chr10 17903947 17904411 -122412354 + L2 LINE L2 2754 3311 -2 445 267 142 36 chr10 17905308 17905533 -122411232 + MIR SINE MIR 14 262 0 258 336 9 18 chr10 17906123 17906233 -122410532 - MER5B DNA MER1_type -69 109 1 2106 122 3 3 chr10 17906246 17906549 -122410216 - AluJb SINE Alu -9 303 1 238 191 330 11 chr10 17906951 17907045 -122409720 - L2 LINE L2 0 3313 3190 1367 157 48 13 chr10 17909158 17909387 -122407378 - AluJo SINE Alu -19 293 57 30 0 0 0 chr10 17909841 17909871 -122406894 + AT_rich Low_complexity Low_complexity 1 30 0 2001 155 0 3 chr10 17910498 17910801 -122405964 - AluJb SINE Alu -6 306 5 23 0 0 0 chr10 17910805 17910828 -122405937 + AT_rich Low_complexity Low_complexity 1 23 0 1719 162 20 47 chr10 17910831 17911233 -122405532 - L1MA8 LINE L1 -2 6289 5899 911 154 77 5 chr10 17911536 17911731 -122405034 + L1MB2 LINE L1 5962 6170 -1 2372 151 16 25 chr10 17911744 17912182 -122404583 + Tigger2a DNA MER2_type 1 434 0 250 96 53 32 chr10 17912182 17912276 -122404489 + (TG)n Simple_repeat Simple_repeat 1 96 0 464 139 42 18 chr10 17912353 17912519 -122404246 + (TG)n Simple_repeat Simple_repeat 2 171 0 27 0 0 0 chr10 17912622 17912649 -122404116 + AT_rich Low_complexity Low_complexity 1 27 0 442 284 47 38 chr10 17913860 17914071 -122402694 + MIR SINE MIR 20 232 -30 22 0 0 0 chr10 17914575 17914597 -122402168 + AT_rich Low_complexity Low_complexity 1 22 0 1726 173 0 24 chr10 17914600 17914895 -122401870 + AluJb SINE Alu 1 288 -24 2349 103 3 0 chr10 17915610 17915920 -122400845 + AluSq SINE Alu 1 311 -2 1891 151 13 16 chr10 17916317 17916622 -122400143 - AluSx SINE Alu -5 307 4 313 250 206 31 chr10 17916652 17916812 -122399953 + L2 LINE L2 3121 3308 -5 2221 120 0 0 chr10 17916957 17917258 -122399507 + AluY SINE Alu 1 301 -10 201 122 49 0 chr10 17917677 17917718 -122399047 + (TA)n Simple_repeat Simple_repeat 2 44 0 1932 87 64 0 chr10 17918140 17918405 -122398360 + AluSc SINE Alu 25 306 -3 2436 151 39 5 chr10 17918600 17919012 -122397753 - MSTA LTR MaLR -2 426 1 22 35 0 0 chr10 17919611 17919640 -122397125 + AT_rich Low_complexity Low_complexity 1 29 0 213 121 0 0 chr10 17920716 17920749 -122396016 + (CA)n Simple_repeat Simple_repeat 2 34 0 2096 139 3 0 chr10 17921816 17922110 -122394655 + AluSq SINE Alu 1 295 -18 1977 136 48 0 chr10 17922114 17922236 -122394529 + AluSq SINE Alu 1 116 -197 198 0 0 0 chr10 17922236 17922258 -122394507 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1977 136 48 0 chr10 17922258 17922430 -122394335 + AluSq SINE Alu 116 309 -4 380 180 126 45 chr10 17923578 17923689 -122393076 + MIR3 SINE MIR 83 202 -6 707 244 5 46 chr10 17924685 17924882 -122391883 - MER3 DNA MER1_type -19 190 2 781 220 35 0 chr10 17924891 17925064 -122391701 - MER5A DNA MER1_type 0 189 11 207 0 0 0 chr10 17926340 17926363 -122390402 + (A)n Simple_repeat Simple_repeat 1 23 0 243 61 0 0 chr10 17928024 17928057 -122388708 + (A)n Simple_repeat Simple_repeat 1 33 0 1928 153 27 0 chr10 17928307 17928607 -122388158 + AluJb SINE Alu 1 308 -4 1749 137 12 0 chr10 17929716 17929971 -122386794 + AluSx SINE Alu 44 301 -11 1001 167 261 29 chr10 17930200 17930445 -122386320 + AluJo SINE Alu 1 302 0 24 0 0 0 chr10 17932184 17932208 -122384557 + AT_rich Low_complexity Low_complexity 1 24 0 426 87 0 29 chr10 17932292 17932361 -122384404 - Alu SINE Alu -5 307 241 1116 145 124 0 chr10 17933401 17933594 -122383171 - AluJo SINE Alu -10 302 86 200 238 0 32 chr10 17934044 17934107 -122382658 + GA-rich Low_complexity Low_complexity 5 65 0 1303 199 63 11 chr10 17935639 17935925 -122380840 - AluJo SINE Alu -11 301 1 843 159 0 0 chr10 17937087 17937219 -122379546 + FLAM_C SINE Alu 1 132 -1 27 0 0 0 chr10 17937852 17937879 -122378886 + AT_rich Low_complexity Low_complexity 1 27 0 1967 160 3 3 chr10 17938287 17938593 -122378172 - AluJb SINE Alu -6 306 1 2106 132 0 0 chr10 17938741 17939036 -122377729 - AluSc SINE Alu -14 295 1 180 97 0 0 chr10 17939039 17939070 -122377695 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 888 259 127 3 chr10 17939132 17939464 -122377301 - L1MC4 LINE L1 -150 7892 7520 941 237 24 0 chr10 17939470 17939642 -122377123 - AluJb SINE Alu -16 296 117 195 42 0 0 chr10 17939642 17939666 -122377099 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 941 237 24 0 chr10 17939666 17939700 -122377065 - AluJb SINE Alu -195 117 85 2400 121 55 38 chr10 17939736 17939918 -122376847 - MSTA LTR MaLR -1 427 250 2659 93 11 16 chr10 17939918 17940283 -122376482 - THE1B LTR MaLR -1 363 1 2400 121 55 38 chr10 17940283 17940385 -122376380 - MSTA LTR MaLR -178 250 151 2962 98 43 14 chr10 17940385 17940789 -122375976 + MLT2A2 LTR ERVL 1 421 -32 807 108 0 0 chr10 17940789 17940909 -122375856 + (TA)n Simple_repeat Simple_repeat 1 120 0 2962 98 43 14 chr10 17940909 17940944 -122375821 + MLT2A2 LTR ERVL 421 453 0 2400 121 55 38 chr10 17940944 17941078 -122375687 - MSTA LTR MaLR -277 151 1 658 230 74 39 chr10 17941078 17941308 -122375457 - L1MC4 LINE L1 -565 7477 7240 324 207 11 81 chr10 17941325 17941412 -122375353 + MER20 DNA MER1_type 4 84 -135 274 250 0 0 chr10 17941407 17941471 -122375294 + Charlie5 DNA MER1_type 2560 2623 0 * 433 268 16 16 chr10 17941481 17941604 -122375161 + MER20 DNA MER1_type 97 219 0 1607 248 26 75 chr10 17941605 17942209 -122374556 - L1MC4a LINE L1 -813 6995 6421 2188 147 28 0 chr10 17942885 17943239 -122373526 + THE1B LTR MaLR 1 364 0 275 268 82 0 chr10 17943530 17943627 -122373138 - MLT1J LTR MaLR 0 511 407 1570 195 37 28 chr10 17943691 17944045 -122372720 + MLT1A1 LTR MaLR 9 365 0 1010 241 122 4 chr10 17944045 17944323 -122372442 - MLT1J LTR MaLR -200 311 1 2037 156 119 8 chr10 17946004 17946389 -122370376 + MSTA LTR MaLR 1 428 0 1878 114 0 0 chr10 17946453 17946698 -122370067 - AluSx SINE Alu -57 255 11 29 0 0 0 chr10 17946702 17946731 -122370034 + AT_rich Low_complexity Low_complexity 1 29 0 1989 128 29 10 chr10 17946733 17947039 -122369726 + AluSx SINE Alu 1 312 0 2155 117 14 0 chr10 17947621 17947912 -122368853 - AluSg SINE Alu -15 295 1 22 56 0 0 chr10 17948435 17948471 -122368294 + AT_rich Low_complexity Low_complexity 1 36 0 2753 164 57 20 chr10 17949196 17949685 -122367080 + MLT2B2 LTR ERVL 2 508 -7 431 313 50 11 chr10 17949920 17950102 -122366663 - MIR3 SINE MIR -1 207 19 2424 90 0 6 chr10 17950455 17950767 -122365998 + AluSx SINE Alu 3 312 0 521 268 52 31 chr10 17950783 17950977 -122365788 - MIR SINE MIR 0 262 65 304 139 0 0 chr10 17952597 17952640 -122364125 + MER66B LTR ERV1 304 346 -140 2269 98 0 0 chr10 17953231 17953528 -122363237 - AluSx SINE Alu 0 312 16 2297 142 27 3 chr10 17953713 17954079 -122362686 + THE1C LTR MaLR 1 375 0 3217 210 65 39 chr10 17954623 17954888 -122361877 + L1MC2 LINE L1 8 264 -5969 255 31 0 0 chr10 17954888 17954920 -122361845 + (CAA)n Simple_repeat Simple_repeat 2 33 0 3217 210 65 39 chr10 17954920 17955996 -122360769 + L1MC2 LINE L1 264 1384 -4849 10035 214 46 35 chr10 17956007 17957316 -122359449 + L1MC2 LINE L1 2181 3474 -3288 262 74 481 0 chr10 17957316 17957370 -122359395 + MADE1 DNA Mariner 1 80 0 10035 214 46 35 chr10 17957370 17960382 -122356383 + L1MC2 LINE L1 3474 6589 -173 1354 111 0 43 chr10 17960382 17960609 -122356156 + AluSg/x SINE Alu 86 303 0 643 212 60 13 chr10 17960610 17960761 -122356004 + L1MC2 LINE L1 6583 6740 -22 2337 51 31 17 chr10 17960771 17961065 -122355700 + AluY SINE Alu 1 298 -13 510 315 98 0 chr10 17961759 17961962 -122354803 + MIR SINE MIR 17 239 -23 1844 132 7 28 chr10 17962142 17962430 -122354335 - AluSx SINE Alu -18 294 13 226 79 0 79 chr10 17962431 17962469 -122354296 - AluSx SINE Alu -265 35 1 2379 88 0 0 chr10 17963128 17963425 -122353340 + AluY SINE Alu 6 302 -9 2077 128 3 19 chr10 17963579 17963892 -122352873 + AluSq SINE Alu 3 310 -3 199 339 68 0 chr10 17963894 17964012 -122352753 + MIR SINE MIR 56 181 -81 2005 173 18 33 chr10 17964077 17964471 -122352294 + MLT1B LTR MaLR 1 388 -2 21 0 0 0 chr10 17964968 17964989 -122351776 + AT_rich Low_complexity Low_complexity 1 21 0 2086 122 0 31 chr10 17965320 17965640 -122351125 + AluSx SINE Alu 1 310 -2 1339 196 44 86 chr10 17966116 17966161 -122350604 + MER7A DNA MER2_type 2 47 -2991 1523 183 0 0 chr10 17966161 17966418 -122350347 + AluJb SINE Alu 41 297 -15 1339 196 44 86 chr10 17966418 17966734 -122350031 + MER7A DNA MER2_type 47 346 0 635 216 114 0 chr10 17966737 17966904 -122349861 - MIR SINE MIR -2 260 75 2432 89 0 6 chr10 17967541 17967855 -122348910 + AluSx SINE Alu 1 312 0 909 190 103 10 chr10 17968367 17968562 -122348203 - AluJo SINE Alu -16 296 84 317 276 102 53 chr10 17968858 17969104 -122347661 - MIR SINE MIR -2 260 3 1913 156 0 28 chr10 17969539 17969860 -122346905 + AluJo SINE Alu 1 312 0 193 216 20 0 chr10 17970930 17970981 -122345784 - L2 LINE L2 -1 3312 3261 658 270 65 14 chr10 17971494 17971709 -122345056 + Charlie8 DNA MER1_type 54 279 -2138 1482 219 102 8 chr10 17973927 17974319 -122342446 - L1MC4 LINE L1 -407 7635 7207 993 237 71 4 chr10 17974493 17974746 -122342019 - MLT1B LTR MaLR 0 390 121 978 201 212 0 chr10 17975315 17975584 -122341181 - MER21B LTR ERV1 -11 852 527 301 281 45 0 chr10 17975817 17975906 -122340859 + L2 LINE L2 3180 3272 0 25 31 0 0 chr10 17976155 17976187 -122340578 + AT_rich Low_complexity Low_complexity 1 32 0 477 273 122 18 chr10 17976283 17976569 -122340196 - L3 LINE CR1 -576 1001 686 859 142 0 0 chr10 17976616 17976743 -122340022 - AluSg/x SINE Alu -19 293 167 2529 161 9 14 chr10 17977169 17977597 -122339168 + MSTB LTR MaLR 1 426 0 6501 184 10 1 chr10 17977597 17978713 -122338052 + MSTB-int LTR MaLR 1 1126 -525 537 256 156 0 chr10 17979019 17979218 -122337547 - MIR SINE MIR -1 261 32 1674 200 0 10 chr10 17979425 17979735 -122337030 - AluJo SINE Alu -5 307 1 2161 124 3 7 chr10 17979898 17980204 -122336561 - AluSx SINE Alu -7 305 1 956 179 0 39 chr10 17980647 17980854 -122335911 + L1MB8 LINE L1 5980 6178 0 360 0 0 0 chr10 17981011 17981051 -122335714 + (TG)n Simple_repeat Simple_repeat 2 41 0 296 278 111 19 chr10 17981089 17981197 -122335568 - L2 LINE L2 0 3313 3196 212 169 0 17 chr10 17981741 17981800 -122334965 + (TATG)n Simple_repeat Simple_repeat 3 60 0 482 299 54 9 chr10 17982483 17982707 -122334058 + L1ME4a LINE L1 5669 5902 -219 1942 121 4 0 chr10 17982993 17983265 -122333500 - AluSx SINE Alu -26 286 14 266 325 19 39 chr10 17983502 17983656 -122333109 - MER5A DNA MER1_type -4 185 35 2280 103 0 13 chr10 17983813 17984113 -122332652 + AluSq SINE Alu 1 296 -17 770 99 0 0 chr10 17985190 17985301 -122331464 - AluY SINE Alu -3 308 198 2117 130 23 0 chr10 17985306 17985606 -122331159 - AluSx SINE Alu -5 307 1 2070 123 32 0 chr10 17986191 17986476 -122330289 + AluSx SINE Alu 1 294 -18 216 67 0 0 chr10 17987210 17987240 -122329525 + (TG)n Simple_repeat Simple_repeat 1 30 0 193 0 0 86 chr10 17989013 17989048 -122327717 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 22 0 0 0 chr10 17989259 17989281 -122327484 + AT_rich Low_complexity Low_complexity 1 22 0 273 352 74 31 chr10 17990038 17990200 -122326565 + L2 LINE L2 3005 3173 -99 259 281 22 11 chr10 17990671 17990760 -122326005 - MIR3 SINE MIR -36 172 83 447 179 0 0 chr10 17991176 17991271 -122325494 + L1MB8 LINE L1 6083 6177 -1 192 344 18 37 chr10 17992811 17992974 -122323791 + L2 LINE L2 583 742 -2572 2199 129 0 3 chr10 17994022 17994324 -122322441 - AluSx SINE Alu -11 301 1 7441 21 2 8 chr10 17994752 17995613 -122321152 + L1PA4 LINE L1 5300 6155 0 726 288 86 23 chr10 17996703 17997139 -122319626 + L2 LINE L2 2562 3032 -281 1149 132 12 0 chr10 17997145 17997312 -122319453 + AluSg/x SINE Alu 135 303 -7 195 222 37 25 chr10 17997348 17997429 -122319336 + L2 LINE L2 3081 3162 -151 1338 163 5 0 chr10 17997431 17997640 -122319125 - AluJo SINE Alu -16 296 87 409 288 27 34 chr10 17997644 17997790 -122318975 + L2 LINE L2 3168 3312 -1 328 277 185 50 chr10 17997819 17998559 -122318206 + L2 LINE L2 2369 3268 -45 287 229 12 24 chr10 17999173 17999256 -122317509 + (CATATA)n Simple_repeat Simple_repeat 5 86 0 2247 117 3 0 chr10 17999371 17999680 -122317085 + AluSq SINE Alu 2 311 -2 1891 151 13 16 chr10 18000077 18000382 -122316383 - AluSx SINE Alu -5 307 4 313 250 206 31 chr10 18000412 18000572 -122316193 + L2 LINE L2 3121 3308 -5 2221 120 0 0 chr10 18000717 18001018 -122315747 + AluY SINE Alu 1 301 -10 201 122 49 0 chr10 18001437 18001478 -122315287 + (TA)n Simple_repeat Simple_repeat 2 44 0 1932 87 64 0 chr10 18001900 18002165 -122314600 + AluSc SINE Alu 25 306 -3 2436 151 39 5 chr10 18002360 18002772 -122313993 - MSTA LTR MaLR -2 426 1 22 35 0 0 chr10 18003371 18003400 -122313365 + AT_rich Low_complexity Low_complexity 1 29 0 213 121 0 0 chr10 18004476 18004509 -122312256 + (CA)n Simple_repeat Simple_repeat 2 34 0 2096 139 3 0 chr10 18005576 18005870 -122310895 + AluSq SINE Alu 1 295 -18 1977 136 48 0 chr10 18005874 18005996 -122310769 + AluSq SINE Alu 1 116 -197 198 0 0 0 chr10 18005996 18006018 -122310747 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1977 136 48 0 chr10 18006018 18006190 -122310575 + AluSq SINE Alu 116 309 -4 380 180 126 45 chr10 18007338 18007449 -122309316 + MIR3 SINE MIR 83 202 -6 707 244 5 46 chr10 18008445 18008642 -122308123 - MER3 DNA MER1_type -19 190 2 781 220 35 0 chr10 18008651 18008824 -122307941 - MER5A DNA MER1_type 0 189 11 207 0 0 0 chr10 18010100 18010123 -122306642 + (A)n Simple_repeat Simple_repeat 1 23 0 222 91 0 0 chr10 18011784 18011817 -122304948 + (A)n Simple_repeat Simple_repeat 1 33 0 1928 153 27 0 chr10 18012067 18012367 -122304398 + AluJb SINE Alu 1 308 -4 1749 137 12 0 chr10 18013476 18013731 -122303034 + AluSx SINE Alu 44 301 -11 1097 167 261 29 chr10 18013960 18014205 -122302560 + AluJo SINE Alu 1 302 0 24 0 0 0 chr10 18015944 18015968 -122300797 + AT_rich Low_complexity Low_complexity 1 24 0 447 87 0 29 chr10 18016052 18016121 -122300644 - Alu SINE Alu -5 307 241 1112 145 124 0 chr10 18017161 18017354 -122299411 - AluJo SINE Alu -10 302 86 200 238 0 32 chr10 18017804 18017867 -122298898 + GA-rich Low_complexity Low_complexity 5 65 0 1286 199 63 11 chr10 18019399 18019685 -122297080 - AluJo SINE Alu -11 301 1 889 159 0 0 chr10 18020847 18020979 -122295786 + FLAM_C SINE Alu 1 132 -1 27 0 0 0 chr10 18021612 18021639 -122295126 + AT_rich Low_complexity Low_complexity 1 27 0 198 0 0 0 chr10 18022571 18022593 -122294172 + (A)n Simple_repeat Simple_repeat 1 22 0 805 99 0 0 chr10 18023043 18023154 -122293611 - AluY SINE Alu -3 308 198 2100 130 23 0 chr10 18023159 18023459 -122293306 - AluSx SINE Alu -5 307 1 2033 126 32 0 chr10 18024044 18024329 -122292436 + AluSx SINE Alu 1 294 -18 219 88 0 0 chr10 18025063 18025097 -122291668 + (TG)n Simple_repeat Simple_repeat 1 34 0 193 0 0 86 chr10 18026870 18026905 -122289860 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 22 0 0 0 chr10 18027116 18027138 -122289627 + AT_rich Low_complexity Low_complexity 1 22 0 318 341 75 35 chr10 18027882 18028055 -122288710 + L2 LINE L2 2994 3173 -99 289 281 22 11 chr10 18028526 18028615 -122288150 - MIR3 SINE MIR -36 172 83 484 161 0 0 chr10 18029031 18029118 -122287647 + L1MB8 LINE L1 6083 6169 -9 221 346 63 79 chr10 18030462 18030829 -122285936 + L2 LINE L2 382 742 -2572 2176 129 0 3 chr10 18031877 18032179 -122284586 - AluSx SINE Alu -11 301 1 7777 20 2 8 chr10 18032607 18033466 -122283299 + L1PA4 LINE L1 5300 6153 -2 880 269 121 39 chr10 18034531 18034994 -122281771 + L2 LINE L2 2541 3032 -281 1161 126 12 0 chr10 18035000 18035167 -122281598 + AluSg/x SINE Alu 137 305 -7 213 222 37 25 chr10 18035203 18035284 -122281481 + L2 LINE L2 3081 3162 -151 1335 163 5 0 chr10 18035286 18035495 -122281270 - AluJo SINE Alu -16 296 87 450 288 27 34 chr10 18035499 18035645 -122281120 + L2 LINE L2 3168 3312 -1 411 279 188 49 chr10 18035674 18036423 -122280342 + L2 LINE L2 2369 3278 -35 287 229 12 24 chr10 18037028 18037111 -122279654 + (CATATA)n Simple_repeat Simple_repeat 5 86 0 2316 94 3 0 chr10 18037226 18037524 -122279241 + AluSp SINE Alu 2 300 -13 227 269 30 104 chr10 18038809 18038943 -122277822 + L2 LINE L2 3190 3313 0 2418 240 90 9 chr10 18039090 18039777 -122276988 + MER20B DNA MER1_type 7 749 -34 2150 125 13 0 chr10 18039777 18040081 -122276684 + AluSq SINE Alu 6 313 0 2142 71 0 8 chr10 18040416 18040683 -122276082 + AluY SINE Alu 1 265 -46 264 167 0 0 chr10 18040683 18040737 -122276028 + Alu SINE Alu 239 292 -10 262 254 25 82 chr10 18040779 18040901 -122275864 + L2 LINE L2 3122 3236 -36 298 231 68 82 chr10 18041653 18041800 -122274965 - MIR SINE MIR -24 238 94 1720 189 3 6 chr10 18041938 18042251 -122274514 - AluJb SINE Alu 0 312 1 2077 112 0 3 chr10 18043703 18044021 -122272744 - AluSx SINE Alu 0 317 1 677 210 0 9 chr10 18044817 18045249 -122271516 + CT-rich Low_complexity Low_complexity 1 427 0 731 210 2 0 chr10 18045275 18045796 -122270969 + CT-rich Low_complexity Low_complexity 1 522 0 202 352 32 24 chr10 18047359 18047484 -122269281 - L2 LINE L2 -235 3037 2912 262 108 0 0 chr10 18048144 18048181 -122268584 + (TTCC)n Simple_repeat Simple_repeat 3 39 0 491 227 0 38 chr10 18048181 18048366 -122268399 + CT-rich Low_complexity Low_complexity 1 178 0 731 203 0 8 chr10 18048370 18048493 -122268272 - FLAM_A SINE Alu -11 122 1 228 171 24 134 chr10 18048857 18048939 -122267826 + MLT1H LTR MaLR 477 549 0 5730 210 37 18 chr10 18050815 18051558 -122265207 + L1MC/D LINE L1 3881 4608 -1630 1847 170 0 13 chr10 18051558 18051870 -122264895 - AluJo SINE Alu -4 308 1 5730 210 37 18 chr10 18051870 18052709 -122264056 + L1MC/D LINE L1 4608 5495 -743 472 317 40 2 chr10 18052772 18053060 -122263705 + L1MEc LINE L1 1531 1804 -909 573 280 102 33 chr10 18053077 18053745 -122263020 + L1MEc LINE L1 1875 2561 -3654 293 345 154 35 chr10 18053745 18054295 -122262470 + L2 LINE L2 2246 2861 -453 2168 112 3 3 chr10 18054414 18054710 -122262055 - AluSx SINE Alu -16 296 1 395 316 41 25 chr10 18054780 18054976 -122261789 - MIR SINE MIR -59 203 5 2063 108 4 0 chr10 18055117 18055396 -122261369 + AluSg SINE Alu 1 280 -30 324 0 0 0 chr10 18055409 18055445 -122261320 + (CA)n Simple_repeat Simple_repeat 1 36 0 482 299 57 15 chr10 18055489 18055689 -122261076 + MIR SINE MIR 11 213 -49 182 174 22 0 chr10 18057017 18057063 -122259702 + CT-rich Low_complexity Low_complexity 3 49 0 2186 105 33 7 chr10 18057896 18058200 -122258565 - AluSp SINE Alu -1 312 1 2240 106 0 28 chr10 18058200 18058520 -122258245 - AluSq SINE Alu -1 312 1 251 250 0 0 chr10 18058753 18058805 -122257960 + LTR30 LTR ERV1 1 52 -670 680 143 57 109 chr10 18058805 18059029 -122257736 + LTR12 LTR ERV1 100 285 -429 299 235 0 0 chr10 18059030 18059098 -122257667 + LTR30 LTR ERV1 553 620 -102 773 158 25 0 chr10 18059098 18059218 -122257547 + pTR5 LTR ERV1 45 167 -2271 2130 109 4 0 chr10 18062415 18062690 -122254075 - AluSx SINE Alu -7 305 30 214 368 53 0 chr10 18063313 18063389 -122253376 - L2 LINE L2 -43 3229 3150 832 257 77 57 chr10 18063672 18064073 -122252692 + MLT1I LTR MaLR 1 409 0 1977 119 6 45 chr10 18064283 18064594 -122252171 - AluSx SINE Alu -13 299 1 38 0 0 0 chr10 18064667 18064705 -122252060 + AT_rich Low_complexity Low_complexity 1 38 0 1961 138 3 49 chr10 18065197 18065523 -122251242 + AluSx SINE Alu 1 311 -1 249 83 0 0 chr10 18065595 18065631 -122251134 + (TA)n Simple_repeat Simple_repeat 1 36 0 1325 178 204 3 chr10 18065683 18065987 -122250778 + MLT1A1 LTR MaLR 1 365 0 252 0 0 0 chr10 18066366 18066394 -122250371 + (TAGG)n Simple_repeat Simple_repeat 2 29 0 2280 113 0 0 chr10 18066702 18067013 -122249752 + AluSx SINE Alu 1 311 -1 409 278 52 113 chr10 18067049 18067297 -122249468 + MIR SINE MIR 18 250 -12 392 330 78 10 chr10 18069594 18069800 -122246965 - L1M4 LINE L1 -916 5230 5011 463 228 112 93 chr10 18070637 18070852 -122245913 + MER20 DNA MER1_type 1 219 0 2198 122 0 0 chr10 18071270 18071565 -122245200 + AluSx SINE Alu 1 295 -17 333 314 31 18 chr10 18071616 18071845 -122244920 - L1ME LINE L1 -295 5826 5595 2643 243 6 16 chr10 18071922 18072602 -122244163 - L1MB7 LINE L1 -129 6055 5383 331 296 72 85 chr10 18072870 18072985 -122243780 + MLT1K LTR MaLR 180 295 -293 717 261 101 0 chr10 18072985 18073173 -122243592 + MER63A DNA MER1_type 2 208 -2 331 296 72 85 chr10 18073173 18073445 -122243320 + MLT1K LTR MaLR 295 562 -26 2113 126 10 0 chr10 18075995 18076379 -122240386 + AluSx SINE Alu 1 387 0 23 33 0 0 chr10 18077216 18077246 -122239519 + AT_rich Low_complexity Low_complexity 1 30 0 2245 88 0 10 chr10 18077249 18077545 -122239220 - AluY SINE Alu -18 293 1 219 237 26 13 chr10 18078690 18078766 -122237999 + (TA)n Simple_repeat Simple_repeat 2 78 0 292 255 64 43 chr10 18078773 18078867 -122237898 - MIR SINE MIR -95 113 18 321 254 201 27 chr10 18079123 18079347 -122237418 - L1ME4a LINE L1 -13 6108 5846 2375 82 3 0 chr10 18080064 18080358 -122236407 - AluSp SINE Alu -18 295 1 21 0 0 0 chr10 18080358 18080379 -122236386 + AT_rich Low_complexity Low_complexity 1 21 0 4477 126 20 48 chr10 18080817 18081659 -122235106 + L1MA8 LINE L1 5466 6284 -7 298 302 47 52 chr10 18082832 18082893 -122233872 - MER5A DNA MER1_type -3 186 126 1627 97 39 130 chr10 18082893 18083224 -122233541 + AluSp SINE Alu 1 301 -12 298 302 47 52 chr10 18083224 18083334 -122233431 - MER5A DNA MER1_type -63 126 16 194 269 30 15 chr10 18084851 18084918 -122231847 - L2 LINE L2 -655 2659 2592 419 249 109 24 chr10 18085037 18085202 -122231563 + MER20 DNA MER1_type 1 179 -40 22 0 0 0 chr10 18085752 18085774 -122230991 + AT_rich Low_complexity Low_complexity 1 22 0 1816 151 14 7 chr10 18085777 18086062 -122230703 - AluJb SINE Alu -23 289 3 738 216 28 0 chr10 18086490 18086666 -122230099 - L1MD2 LINE L1 -26 6333 6153 252 0 0 0 chr10 18086666 18086694 -122230071 + (TG)n Simple_repeat Simple_repeat 2 29 0 1569 208 62 20 chr10 18086724 18087162 -122229603 - L1MD1 LINE L1 -160 6342 5887 1870 240 63 21 chr10 18087193 18088126 -122228639 - L1MD1 LINE L1 -743 5663 4751 854 272 36 8 chr10 18088169 18088419 -122228346 + MER76 LTR ERV 432 688 0 4025 243 59 30 chr10 18088424 18088610 -122228155 - L1MD1 LINE L1 -3316 3090 2911 321 89 0 0 chr10 18088610 18088655 -122228110 + (CA)n Simple_repeat Simple_repeat 2 46 0 4025 243 59 30 chr10 18088655 18091182 -122225583 - L1MD1 LINE L1 -3495 2911 273 218 105 26 0 chr10 18091333 18091371 -122225394 + (TA)n Simple_repeat Simple_repeat 1 39 0 254 299 51 29 chr10 18091517 18091654 -122225111 - MIR SINE MIR -57 205 66 208 319 159 6 chr10 18093349 18093506 -122223259 + L2 LINE L2 2698 2878 -436 433 316 65 56 chr10 18093591 18093822 -122222943 + MIR SINE MIR 8 240 -22 201 128 64 21 chr10 18094195 18094242 -122222523 + T-rich Low_complexity Low_complexity 4 52 0 2043 138 3 0 chr10 18094842 18095132 -122221633 + AluSx SINE Alu 1 291 -21 310 232 11 32 chr10 18095157 18095252 -122221513 - L1MC4 LINE L1 -1333 6709 6617 871 116 0 58 chr10 18095254 18095599 -122221166 + (TA)n Simple_repeat Simple_repeat 1 325 0 23 68 0 0 chr10 18095619 18095663 -122221102 + AT_rich Low_complexity Low_complexity 1 44 0 271 319 53 41 chr10 18095908 18096228 -122220537 + L1MEd LINE L1 60 383 -5736 588 296 79 24 chr10 18096297 18096713 -122220052 + L1M4 LINE L1 3725 4163 -1983 90 51 0 6 chr10 18096848 18096911 -122219854 + AT_rich Low_complexity Low_complexity 1 63 -93 186 0 0 81 chr10 18096911 18096948 -122219817 + (TTA)n Simple_repeat Simple_repeat 1 34 0 90 51 0 6 chr10 18096948 18097041 -122219724 + AT_rich Low_complexity Low_complexity 63 156 0 242 243 81 0 chr10 18097053 18097189 -122219576 + L1M4 LINE L1 4329 4475 -1671 1775 183 3 3 chr10 18099095 18099423 -122217342 + AluJo SINE Alu 1 312 0 2154 133 3 0 chr10 18101406 18101707 -122215058 - AluSq SINE Alu -10 303 2 2781 10 0 10 chr10 18102136 18102449 -122214316 - AluYb8 SINE Alu -8 310 1 193 337 45 0 chr10 18102610 18102699 -122214066 - MIR SINE MIR -70 192 100 787 136 19 31 chr10 18103286 18103527 -122213238 + CT-rich Low_complexity Low_complexity 1 238 0 494 287 38 24 chr10 18103821 18104030 -122212735 + HAL1 LINE L1 771 982 -1525 28 48 0 0 chr10 18104030 18104072 -122212693 + AT_rich Low_complexity Low_complexity 1 42 0 1274 271 94 31 chr10 18104088 18104804 -122211961 + HAL1 LINE L1 1622 2382 -125 348 254 232 0 chr10 18104959 18105136 -122211629 + L1ME4a LINE L1 5901 6118 -3 1543 275 112 20 chr10 18105593 18106466 -122210299 - L2 LINE L2 0 3313 2367 2140 125 20 0 chr10 18107549 18107852 -122208913 + AluSg SINE Alu 1 309 -1 325 193 0 0 chr10 18107854 18107911 -122208854 + AluJ/FLAM SINE Alu 1 57 -245 337 267 43 52 chr10 18108172 18108288 -122208477 + L2 LINE L2 3158 3272 0 27 0 0 0 chr10 18109299 18109326 -122207439 + AT_rich Low_complexity Low_complexity 1 27 0 255 259 83 19 chr10 18109608 18109716 -122207049 + MER117 DNA MER1_type 9 123 -74 2302 109 3 0 chr10 18110068 18110371 -122206394 - AluSg1 SINE Alu -1 308 5 1692 161 30 18 chr10 18110537 18110866 -122205899 - MER44D DNA MER2_type -6 603 1 21 0 0 0 chr10 18111053 18111074 -122205691 + AT_rich Low_complexity Low_complexity 1 21 0 2810 174 7 6 chr10 18111163 18111708 -122205057 - L1P LINE L1 -1101 5045 4500 1097 95 6 12 chr10 18111710 18111878 -122204887 + L1PA13 LINE L1 5993 6159 -4 193 311 18 113 chr10 18114432 18114654 -122202111 + L2 LINE L2 1335 1535 -1779 699 297 89 34 chr10 18114664 18115489 -122201276 + L2 LINE L2 1798 3313 0 379 371 81 37 chr10 18115496 18115930 -122200835 + L2 LINE L2 2442 2894 -420 212 248 29 67 chr10 18116071 18116108 -122200657 + L2 LINE L2 3116 3153 -160 1810 181 41 0 chr10 18116108 18116401 -122200364 - AluJb SINE Alu -7 305 1 212 248 29 67 chr10 18116401 18116468 -122200297 + L2 LINE L2 3153 3216 -97 1846 167 10 0 chr10 18117053 18117347 -122199418 + AluSx SINE Alu 1 297 -15 180 0 0 0 chr10 18117911 18117931 -122198834 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 258 329 99 26 chr10 18118244 18118396 -122198369 + MIR SINE MIR 57 219 -43 1120 274 147 35 chr10 18119179 18120068 -122196697 - L2 LINE L2 -6 3307 2334 288 0 0 0 chr10 18120073 18120105 -122196660 + (TCTA)n Simple_repeat Simple_repeat 1 32 0 1073 153 6 0 chr10 18120113 18120283 -122196482 - L1PB3 LINE L1 -22 6132 5962 224 212 15 0 chr10 18120326 18120392 -122196373 + (TA)n Simple_repeat Simple_repeat 2 68 0 326 228 38 25 chr10 18120581 18120660 -122196105 - MIR SINE MIR -174 88 9 208 216 0 0 chr10 18121345 18121382 -122195383 + polypurine Low_complexity Low_complexity 4 40 0 1833 132 0 4 chr10 18121790 18122062 -122194703 - AluSx SINE Alu -12 300 30 307 270 10 40 chr10 18123392 18123492 -122193273 - MIR3 SINE MIR -1 207 111 618 255 84 38 chr10 18123501 18123740 -122193025 - MIR SINE MIR -7 255 6 2202 103 0 26 chr10 18124234 18124536 -122192229 + AluY SINE Alu 1 294 -17 217 204 0 0 chr10 18124595 18124639 -122192126 + L2 LINE L2 3268 3311 -2 234 319 106 0 chr10 18124910 18125023 -122191742 - MIR SINE MIR -57 205 81 214 226 258 0 chr10 18125556 18125618 -122191147 - MER5A DNA MER1_type -111 78 1 790 191 15 0 chr10 18125852 18125983 -122190782 - FLAM_C SINE Alu 0 133 1 2292 238 53 29 chr10 18126943 18127604 -122189161 - L1M4 LINE L1 -5851 691 15 1081 246 116 34 chr10 18127853 18128231 -122188534 + MLT1I LTR MaLR 1 409 0 23 33 0 0 chr10 18128407 18128437 -122188328 + AT_rich Low_complexity Low_complexity 1 30 0 1563 144 78 11 chr10 18128440 18128711 -122188054 - AluJo SINE Alu -21 291 3 2458 87 0 3 chr10 18128857 18129168 -122187597 + AluY SINE Alu 1 310 -1 1996 133 3 17 chr10 18129974 18130275 -122186490 - AluSx SINE Alu -15 297 1 22 0 0 0 chr10 18130626 18130648 -122186117 + AT_rich Low_complexity Low_complexity 1 22 0 34 42 0 0 chr10 18131852 18131900 -122184865 + AT_rich Low_complexity Low_complexity 1 48 0 1679 232 45 51 chr10 18134380 18134820 -122181945 + L1ME LINE L1 4749 5190 -972 1770 155 18 3 chr10 18134820 18135104 -122181661 + AluJb SINE Alu 1 288 -24 1679 232 45 51 chr10 18135104 18135602 -122181163 + L1ME LINE L1 5190 5675 -487 2080 162 29 2 chr10 18135607 18136020 -122180745 + L1M3 LINE L1 5257 5680 -500 694 99 28 21 chr10 18136043 18136184 -122180581 + GA-rich Low_complexity Low_complexity 4 145 0 281 216 68 0 chr10 18136929 18137003 -122179762 + MER5A DNA MER1_type 29 107 -82 310 180 16 0 chr10 18138597 18138658 -122178107 + L2 LINE L2 3252 3313 0 2139 138 3 0 chr10 18138744 18139055 -122177710 + AluSx SINE Alu 1 312 0 2238 118 3 0 chr10 18139749 18140053 -122176712 - AluSx SINE Alu -7 305 1 2221 110 0 0 chr10 18141191 18141483 -122175282 + AluSg SINE Alu 5 296 -14 810 270 53 31 chr10 18142205 18142431 -122174334 + MIR SINE MIR 5 235 -27 316 305 57 9 chr10 18142525 18142630 -122174135 - L2 LINE L2 -20 3293 3184 344 39 0 20 chr10 18142693 18142744 -122174021 + (TG)n Simple_repeat Simple_repeat 2 51 0 180 77 0 0 chr10 18142832 18142858 -122173907 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 292 336 50 8 chr10 18142866 18142985 -122173780 + L3b LINE CR1 1296 1419 -164 2079 73 36 0 chr10 18143441 18143716 -122173049 + L1MA2 LINE L1 6018 6302 -2 32 26 0 0 chr10 18143717 18143756 -122173009 + AT_rich Low_complexity Low_complexity 1 39 0 220 325 17 43 chr10 18144600 18144717 -122172048 - MIR3 SINE MIR -29 179 66 1483 140 21 0 chr10 18146871 18147106 -122169659 + AluJb SINE Alu 40 279 -33 272 247 12 0 chr10 18147106 18147191 -122169574 + GA-rich Low_complexity Low_complexity 2 87 0 2286 99 0 13 chr10 18148349 18148661 -122168104 + AluSx SINE Alu 3 310 -2 537 262 133 14 chr10 18148906 18149116 -122167649 - MIR SINE MIR 0 262 28 31 44 0 0 chr10 18149556 18149601 -122167164 + AT_rich Low_complexity Low_complexity 1 45 0 3009 172 0 25 chr10 18150138 18150702 -122166063 - L1MA6 LINE L1 0 6300 5751 2241 144 66 3 chr10 18150716 18151097 -122165668 + L1MA6 LINE L1 5350 5754 -546 1461 132 0 18 chr10 18151576 18151795 -122164970 + AluSg/x SINE Alu 79 293 -19 1224 175 61 8 chr10 18152249 18152513 -122164252 - L1MA6 LINE L1 -801 5345 5074 3382 211 39 7 chr10 18152514 18153340 -122163425 + L1 LINE L1 4160 5011 -1135 306 287 10 20 chr10 18155436 18155537 -122161228 - MIR SINE MIR -72 190 91 27 0 0 0 chr10 18155659 18155686 -122161079 + AT_rich Low_complexity Low_complexity 1 27 0 618 260 148 9 chr10 18156436 18156659 -122160106 + MIR SINE MIR 2 255 -7 9224 71 2 11 chr10 18157598 18158883 -122157882 + L1P LINE L1 685 2091 -4055 944 214 112 0 chr10 18159108 18159304 -122157461 + MER20 DNA MER1_type 1 218 -1 4025 119 10 2 chr10 18163574 18164164 -122152601 + MER41B LTR ERV1 41 635 0 968 189 98 47 chr10 18164563 18164881 -122151884 + LTR8A LTR ERV1 1 334 -393 240 179 0 0 chr10 18165400 18165439 -122151326 - MLT1L LTR MaLR -130 485 447 22 0 0 0 chr10 18165855 18165877 -122150888 + AT_rich Low_complexity Low_complexity 1 22 0 777 250 71 28 chr10 18165961 18166173 -122150592 - MIR SINE MIR -21 241 21 225 257 48 29 chr10 18166187 18166292 -122150473 - L1MC/D LINE L1 -2031 5777 5671 436 272 94 20 chr10 18166444 18166655 -122150110 + L1MC/D LINE L1 5479 5722 -520 288 204 194 10 chr10 18167602 18167700 -122149065 + MER5C DNA MER1_type 209 324 0 189 0 0 0 chr10 18168421 18168442 -122148323 + (TTAA)n Simple_repeat Simple_repeat 3 23 0 541 302 148 0 chr10 18169310 18169512 -122147253 + MIR SINE MIR 10 241 -21 1337 187 121 18 chr10 18169859 18170191 -122146574 - MLT2B3 LTR ERVL -188 366 1 605 317 118 27 chr10 18170351 18170689 -122146076 - L2 LINE L2 -9 3304 2936 543 259 22 35 chr10 18170879 18171107 -122145658 + L1M4 LINE L1 4777 5001 -1145 781 215 5 96 chr10 18171839 18172086 -122144679 + MER20 DNA MER1_type 1 219 0 1964 108 34 0 chr10 18172613 18172881 -122143884 - AluSx SINE Alu -35 277 1 4215 122 21 19 chr10 18172907 18173586 -122143179 - L1MA6 LINE L1 0 6300 5621 1087 194 198 35 chr10 18173586 18173889 -122142876 - MSTC LTR MaLR -69 359 2 1014 230 115 4 chr10 18173889 18174150 -122142615 - L1 LINE L1 -1765 4381 4092 204 354 73 0 chr10 18174288 18174384 -122142381 - L2 LINE L2 -30 3283 3181 210 250 50 0 chr10 18175633 18175693 -122141072 + MIR SINE MIR 123 185 -77 736 262 36 18 chr10 18175732 18175953 -122140812 - MIR SINE MIR -14 248 24 1988 210 40 15 chr10 18176176 18176695 -122140070 + L1M4 LINE L1 3535 4066 -2080 1664 170 33 95 chr10 18176695 18177084 -122139681 + MLT1A1 LTR MaLR 1 365 0 716 77 7 147 chr10 18177275 18177418 -122139347 - MLT1B LTR MaLR -267 123 1 296 179 179 0 chr10 18177441 18177519 -122139246 + LTR33 LTR ERVL 412 503 -18 209 234 347 8 chr10 18177834 18177958 -122138807 - MIR SINE MIR -92 170 5 486 262 60 113 chr10 18178082 18178165 -122138600 - MIR SINE MIR -27 235 149 2110 133 68 8 chr10 18178165 18178519 -122138246 - THE1C LTR MaLR 0 375 1 486 262 60 113 chr10 18178519 18178683 -122138082 - MIR SINE MIR -113 149 1 298 290 204 40 chr10 18179866 18180497 -122136268 + L2 LINE L2 2156 2890 -424 1107 205 16 77 chr10 18183326 18183638 -122133127 + AluJb SINE Alu 2 294 -8 1062 90 0 0 chr10 18183909 18184042 -122132723 + AluSq/x SINE Alu 1 133 -179 2167 132 7 0 chr10 18184045 18184388 -122132377 + AluSx SINE Alu 1 345 0 1395 122 0 5 chr10 18184518 18184715 -122132050 + AluSq SINE Alu 95 290 -23 214 359 88 19 chr10 18184768 18184927 -122131838 - L2 LINE L2 -908 2406 2237 2155 56 0 4 chr10 18185617 18185886 -122130879 + L1PA10 LINE L1 5712 5979 -189 206 380 28 42 chr10 18186154 18186296 -122130469 + MIR3 SINE MIR 16 155 -53 285 350 81 0 chr10 18186935 18187058 -122129707 - MIR3 SINE MIR -3 205 73 199 321 7 102 chr10 18187072 18187209 -122129556 + L2 LINE L2 2930 3053 -219 644 298 13 14 chr10 18187292 18187477 -122129288 - MIR SINE MIR -62 146 2 215 287 111 50 chr10 18187483 18187664 -122129101 + L2 LINE L2 3105 3296 -17 2241 113 0 0 chr10 18187702 18188003 -122128762 + AluSx SINE Alu 1 301 -11 2168 125 0 0 chr10 18188436 18188740 -122128025 + AluSx SINE Alu 1 304 -8 528 268 42 84 chr10 18188871 18189775 -122126990 - L1MC/D LINE L1 -869 5260 4608 2235 222 48 54 chr10 18189952 18190470 -122126295 + LTR40a LTR ERVL 4 518 -1 766 301 60 93 chr10 18190498 18190640 -122126125 - L1MC/D LINE L1 -4982 1137 992 1876 160 10 7 chr10 18190640 18190940 -122125825 - AluSx SINE Alu -11 301 1 766 301 60 93 chr10 18190940 18191278 -122125487 - L1MC/D LINE L1 -5127 992 644 393 22 0 0 chr10 18191278 18191324 -122125441 + (TG)n Simple_repeat Simple_repeat 2 47 0 766 301 60 93 chr10 18191324 18191990 -122124775 - L1MC/D LINE L1 -5475 644 28 263 182 0 0 chr10 18292841 18292885 -122023880 - Alu SINE Alu -263 45 2 780 158 33 0 chr10 18293103 18293223 -122023542 - AluJb SINE Alu -13 299 176 280 163 0 0 chr10 18293242 18293291 -122023474 - AluSc SINE Alu -81 218 170 280 163 0 0 chr10 18293274 18293323 -122023442 - AluSp/q SINE Alu -83 220 172 280 163 0 0 chr10 18293306 18293355 -122023410 - AluSp/q SINE Alu -83 220 172 280 163 0 0 chr10 18293338 18293387 -122023378 - AluSg/x SINE Alu -82 220 172 280 163 0 0 chr10 18293370 18293419 -122023346 - AluSp/q SINE Alu -83 220 172 830 198 23 23 chr10 18293435 18293652 -122023113 - AluJb SINE Alu -93 219 3 361 236 79 0 chr10 18293736 18293863 -122022902 - AluSc SINE Alu 0 299 163 956 179 40 20 chr10 18293977 18294178 -122022587 + AluSc SINE Alu 103 307 -2 1102 62 17 22 chr10 18294184 18294363 -122022402 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 534 252 0 71 chr10 18294420 18294575 -122022190 + MIR SINE MIR 12 155 -107 23 0 0 0 chr10 18295533 18295556 -122021209 + AT_rich Low_complexity Low_complexity 1 23 0 1070 179 44 28 chr10 18296036 18296288 -122020477 - AluJb SINE Alu -15 297 42 757 167 8 16 chr10 18296969 18297095 -122019670 + FLAM_C SINE Alu 2 126 -17 258 329 99 26 chr10 18297956 18298108 -122018657 + MIR SINE MIR 57 219 -43 1120 274 147 35 chr10 18298891 18299780 -122016985 - L2 LINE L2 -6 3307 2334 324 0 0 0 chr10 18299785 18299821 -122016944 + (TCTA)n Simple_repeat Simple_repeat 1 36 0 1089 147 6 0 chr10 18299829 18299999 -122016766 - L1PB3 LINE L1 -22 6132 5962 224 212 15 0 chr10 18300042 18300108 -122016657 + (TA)n Simple_repeat Simple_repeat 2 68 0 326 228 38 25 chr10 18300297 18300376 -122016389 - MIR SINE MIR -174 88 9 208 216 0 0 chr10 18301061 18301098 -122015667 + polypurine Low_complexity Low_complexity 4 40 0 1791 138 0 4 chr10 18301508 18301777 -122014988 - AluSx SINE Alu -15 297 30 307 270 10 40 chr10 18303109 18303209 -122013556 - MIR3 SINE MIR -1 207 111 574 264 84 38 chr10 18303218 18303457 -122013308 - MIR SINE MIR -7 255 6 2174 106 0 26 chr10 18303951 18304253 -122012512 + AluY SINE Alu 1 294 -17 217 204 0 0 chr10 18304312 18304356 -122012409 + L2 LINE L2 3268 3311 -2 234 319 106 0 chr10 18304627 18304740 -122012025 - MIR SINE MIR -57 205 81 214 226 258 0 chr10 18305273 18305335 -122011430 - MER5A DNA MER1_type -111 78 1 790 191 15 0 chr10 18305569 18305700 -122011065 - FLAM_C SINE Alu 0 133 1 2247 241 53 29 chr10 18306660 18307321 -122009444 - L1M4 LINE L1 -5851 691 15 1081 246 116 34 chr10 18307570 18307948 -122008817 + MLT1I LTR MaLR 1 409 0 23 33 0 0 chr10 18308124 18308154 -122008611 + AT_rich Low_complexity Low_complexity 1 30 0 1563 144 78 11 chr10 18308157 18308428 -122008337 - AluJo SINE Alu -21 291 3 2458 87 0 3 chr10 18308574 18308885 -122007880 + AluY SINE Alu 1 310 -1 1996 133 3 17 chr10 18309692 18309993 -122006772 - AluSx SINE Alu -15 297 1 22 0 0 0 chr10 18310344 18310366 -122006399 + AT_rich Low_complexity Low_complexity 1 22 0 34 42 0 0 chr10 18311570 18311618 -122005147 + AT_rich Low_complexity Low_complexity 1 48 0 1679 232 45 51 chr10 18314098 18314538 -122002227 + L1ME LINE L1 4749 5190 -972 1770 155 18 3 chr10 18314538 18314822 -122001943 + AluJb SINE Alu 1 288 -24 1679 232 45 51 chr10 18314822 18315320 -122001445 + L1ME LINE L1 5190 5675 -487 2080 162 29 2 chr10 18315325 18315738 -122001027 + L1M3 LINE L1 5257 5680 -500 350 41 0 20 chr10 18315761 18315810 -122000955 + (GGGAA)n Simple_repeat Simple_repeat 4 51 0 466 111 60 17 chr10 18316016 18316133 -122000632 + GA-rich Low_complexity Low_complexity 4 125 0 281 216 68 0 chr10 18316878 18316952 -121999813 + MER5A DNA MER1_type 29 107 -82 310 180 16 0 chr10 18318546 18318607 -121998158 + L2 LINE L2 3252 3313 0 2139 138 3 0 chr10 18318693 18319004 -121997761 + AluSx SINE Alu 1 312 0 2238 118 3 0 chr10 18319698 18320002 -121996763 - AluSx SINE Alu -7 305 1 2240 110 0 0 chr10 18321140 18321432 -121995333 + AluSg SINE Alu 5 296 -14 743 270 53 31 chr10 18322154 18322380 -121994385 + MIR SINE MIR 5 235 -27 287 305 57 9 chr10 18322474 18322579 -121994186 - L2 LINE L2 -20 3293 3184 344 39 0 20 chr10 18322642 18322693 -121994072 + (TG)n Simple_repeat Simple_repeat 2 51 0 180 77 0 0 chr10 18322781 18322807 -121993958 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 259 336 50 8 chr10 18322815 18322934 -121993831 + L3b LINE CR1 1296 1419 -164 1992 73 36 0 chr10 18323390 18323665 -121993100 + L1MA2 LINE L1 6018 6302 -2 32 26 0 0 chr10 18323666 18323705 -121993060 + AT_rich Low_complexity Low_complexity 1 39 0 1506 140 21 0 chr10 18326820 18327055 -121989710 + AluJb SINE Alu 40 279 -33 272 247 12 0 chr10 18327055 18327140 -121989625 + GA-rich Low_complexity Low_complexity 2 87 0 2305 99 0 13 chr10 18328298 18328610 -121988155 + AluSx SINE Alu 3 310 -2 476 262 133 14 chr10 18328855 18329065 -121987700 - MIR SINE MIR 0 262 28 31 44 0 0 chr10 18329505 18329550 -121987215 + AT_rich Low_complexity Low_complexity 1 45 0 2854 172 0 25 chr10 18330087 18330651 -121986114 - L1MA6 LINE L1 0 6300 5751 2223 144 66 3 chr10 18330665 18331046 -121985719 + L1MA6 LINE L1 5350 5754 -546 1470 132 0 18 chr10 18331525 18331744 -121985021 + AluSg/x SINE Alu 77 291 -19 783 237 111 76 chr10 18332021 18332401 -121984364 - MSTD LTR MaLR -3 393 1 2267 108 7 0 chr10 18332561 18332858 -121983907 + AluSp SINE Alu 7 305 -8 2294 119 0 0 chr10 18333417 18333719 -121983046 + AluSx SINE Alu 1 302 -10 237 137 98 0 chr10 18333776 18333827 -121982938 + L2 LINE L2 3217 3272 0 1718 154 32 4 chr10 18334294 18334573 -121982192 - AluJo SINE Alu -25 287 1 2589 49 0 3 chr10 18334913 18335219 -121981546 - AluY SINE Alu -6 305 1 306 291 75 8 chr10 18335337 18335471 -121981294 + MIR SINE MIR 112 254 -8 660 210 90 93 chr10 18335666 18336112 -121980653 + MLT1F1 LTR MaLR 2 537 -30 226 245 21 64 chr10 18336209 18336303 -121980462 + MIR SINE MIR 118 207 -55 2188 118 30 3 chr10 18336390 18336694 -121980071 - AluSx SINE Alu 0 312 1 354 307 63 47 chr10 18336703 18337065 -121979700 + L1MC4a LINE L1 5582 5952 -212 331 267 70 60 chr10 18337405 18337819 -121978946 + L1ME4a LINE L1 5643 6097 -24 22 35 0 0 chr10 18338771 18338800 -121977965 + AT_rich Low_complexity Low_complexity 1 29 0 237 287 50 0 chr10 18339062 18339163 -121977602 - MIR SINE MIR -119 143 38 2125 138 0 0 chr10 18339661 18339951 -121976814 - AluSx SINE Alu -17 295 6 855 194 5 0 chr10 18340865 18341253 -121975512 + GA-rich Low_complexity Low_complexity 1 390 0 2283 103 0 0 chr10 18342570 18342861 -121973904 - AluSc SINE Alu -18 291 1 2239 97 0 35 chr10 18343491 18343801 -121972964 + AluSq SINE Alu 1 299 -14 31 0 0 0 chr10 18344007 18344038 -121972727 + AT_rich Low_complexity Low_complexity 1 31 0 367 287 97 41 chr10 18345153 18345567 -121971198 + L2 LINE L2 1856 2292 -1022 1693 156 57 7 chr10 18345652 18345934 -121970831 - AluJb SINE Alu -16 296 1 295 143 0 0 chr10 18347883 18347925 -121968840 - LTR7 LTR ERV1 -408 42 1 480 300 78 40 chr10 18349579 18349926 -121966839 + L1ME LINE L1 5302 5661 -460 900 92 0 0 chr10 18350303 18350423 -121966342 + L1MA2 LINE L1 6185 6304 0 866 180 87 0 chr10 18351640 18351812 -121964953 + MER5A DNA MER1_type 1 187 -2 4694 68 224 0 chr10 18351812 18352487 -121964278 + LTR12 LTR ERV1 1 826 0 35816 88 30 5 chr10 18352511 18357289 -121959476 + HERV9 LTR ERV1 58 4954 -3445 2092 176 92 78 chr10 18357284 18358209 -121958556 + Harlequin LTR ERV1 842 1720 -5176 * 4733 93 1 15 chr10 18358203 18358856 -121957909 + Harlequin LTR ERV1 7756 8399 0 5615 70 110 0 chr10 18358856 18359600 -121957165 + LTR12 LTR ERV1 1 826 0 210 37 0 0 chr10 18360121 18360148 -121956617 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 1651 201 7 0 chr10 18360150 18360429 -121956336 - AluJo SINE Alu -31 281 1 423 193 23 0 chr10 18360700 18360788 -121955977 - MER5A DNA MER1_type -96 93 4 562 262 12 24 chr10 18361013 18361181 -121955584 - MER5B DNA MER1_type -5 173 8 545 305 47 60 chr10 18361863 18362243 -121954522 - L2 LINE L2 0 3272 2898 315 0 0 0 chr10 18362324 18362359 -121954406 + (CA)n Simple_repeat Simple_repeat 1 35 0 257 0 30 0 chr10 18362420 18362453 -121954312 + (CA)n Simple_repeat Simple_repeat 2 35 0 298 0 48 0 chr10 18362515 18362557 -121954208 + (CA)n Simple_repeat Simple_repeat 2 45 0 1593 196 18 0 chr10 18362628 18362909 -121953856 - AluJb SINE Alu -20 292 7 2170 132 35 51 chr10 18364618 18365013 -121951752 - MLT1B LTR MaLR -1 389 1 296 359 16 47 chr10 18365104 18365296 -121951469 - L2 LINE L2 -173 3099 2914 797 205 62 22 chr10 18365324 18365548 -121951217 + MER106A DNA MER1_type 3 235 -1 1943 134 39 0 chr10 18365831 18366114 -121950651 + AluSg SINE Alu 1 294 -16 329 348 59 24 chr10 18366118 18366457 -121950308 - L2 LINE L2 -779 2535 2185 4936 95 1 36 chr10 18369200 18369913 -121946852 + LTR12 LTR ERV1 1 688 0 276 326 21 57 chr10 18369923 18370064 -121946701 - MIR SINE MIR -79 183 48 1540 216 55 9 chr10 18372198 18372637 -121944128 - MLT1C LTR MaLR -3 464 6 2225 108 0 3 chr10 18373339 18373635 -121943130 - AluSc SINE Alu -14 295 1 256 299 76 22 chr10 18374775 18374939 -121941826 + MIR SINE MIR 34 201 -61 21 36 0 0 chr10 18374942 18374970 -121941795 + AT_rich Low_complexity Low_complexity 1 28 0 795 143 30 30 chr10 18375159 18375292 -121941473 + FLAM_C SINE Alu 1 133 0 238 329 155 12 chr10 18375305 18375466 -121941299 - MIR SINE MIR -3 259 76 2145 135 0 3 chr10 18375678 18375981 -121940784 - AluSx SINE Alu -10 302 1 1017 178 11 11 chr10 18376428 18376619 -121940146 - AluJo SINE Alu -121 191 1 1856 139 0 0 chr10 18377853 18378120 -121938645 - AluSx SINE Alu -45 267 1 6033 164 37 18 chr10 18378764 18379321 -121937444 - LTR57-int LTR ERVL -4110 1233 688 201 94 0 0 chr10 18379321 18379353 -121937412 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 6033 164 37 18 chr10 18379353 18380005 -121936760 - LTR57-int LTR ERVL -4655 688 1 772 192 24 6 chr10 18380005 18380172 -121936593 - LTR57 LTR ERVL 0 411 242 325 97 0 125 chr10 18380187 18380259 -121936506 - LTR57 LTR ERVL -348 63 1 * 1244 248 35 35 chr10 18380259 18380625 -121936140 - MER45B DNA AcHobo -352 688 323 482 176 64 40 chr10 18380628 18380753 -121936012 + MLT1A2 LTR MaLR 1 128 -246 1917 151 6 22 chr10 18382062 18382374 -121934391 - AluJb SINE Alu -5 307 1 502 370 19 0 chr10 18382930 18383138 -121933627 + MIR SINE MIR 33 244 -18 2094 118 10 7 chr10 18383919 18384223 -121932542 + AluSx SINE Alu 1 305 -7 469 308 138 16 chr10 18384753 18385071 -121931694 + L1ME4a LINE L1 5661 6017 -104 22 30 0 61 chr10 18385426 18385474 -121931291 + AT_rich Low_complexity Low_complexity 1 46 -16 582 103 10 0 chr10 18385474 18385571 -121931194 + L1MA2 LINE L1 6207 6304 0 22 30 0 61 chr10 18385571 18385588 -121931177 + AT_rich Low_complexity Low_complexity 46 62 0 333 0 0 0 chr10 18385795 18385832 -121930933 + (TTA)n Simple_repeat Simple_repeat 3 39 0 2126 132 0 0 chr10 18386008 18386319 -121930446 + AluSx SINE Alu 2 312 0 2407 107 3 19 chr10 18387556 18387929 -121928836 + MER1A DNA MER1_type 163 529 0 380 266 166 0 chr10 18387981 18388120 -121928645 - MIR SINE MIR -4 258 97 2106 117 0 0 chr10 18388205 18388510 -121928255 + AluSx SINE Alu 1 305 0 592 233 176 21 chr10 18388891 18389084 -121927681 - MIR SINE MIR 0 262 40 411 246 140 3 chr10 18389858 18389986 -121926779 - MIR SINE MIR -62 146 12 207 287 180 43 chr10 18390450 18390823 -121925942 + L2 LINE L2 2465 2888 -426 321 243 88 88 chr10 18392109 18392245 -121924520 - MER5B DNA MER1_type -36 153 4 1872 123 13 7 chr10 18393216 18393526 -121923239 + L1PA13 LINE L1 5806 6117 -46 431 361 76 8 chr10 18394148 18394411 -121922354 + L3 LINE CR1 130 410 -1167 455 274 91 17 chr10 18394488 18394663 -121922102 + MIR SINE MIR 15 202 -60 479 344 176 23 chr10 18394689 18395293 -121921472 + L3 LINE CR1 530 1225 -352 1085 150 0 0 chr10 18395511 18395671 -121921094 - AluSg/x SINE Alu -16 296 137 327 195 102 59 chr10 18396928 18397046 -121919719 - L2 LINE L2 -4 3268 3146 22 0 0 0 chr10 18398858 18398880 -121917885 + AT_rich Low_complexity Low_complexity 1 22 0 278 306 0 12 chr10 18398881 18398966 -121917799 + (TA)n Simple_repeat Simple_repeat 2 85 0 425 308 126 28 chr10 18400639 18400821 -121915944 - MIR3 SINE MIR -7 201 2 208 127 36 0 chr10 18401638 18401693 -121915072 + (TA)n Simple_repeat Simple_repeat 1 57 0 307 177 40 17 chr10 18401712 18401887 -121914878 + (TA)n Simple_repeat Simple_repeat 1 179 0 1996 122 0 78 chr10 18402922 18403257 -121913508 - AluSx SINE Alu -3 309 1 435 304 109 14 chr10 18405611 18405831 -121910934 + MIR SINE MIR 19 259 -3 1145 171 0 0 chr10 18406045 18406232 -121910533 - AluSg/x SINE Alu -8 302 116 180 0 0 0 chr10 18406344 18406364 -121910401 + (TAA)n Simple_repeat Simple_repeat 2 21 0 200 314 14 0 chr10 18406671 18406741 -121910024 + GA-rich Low_complexity Low_complexity 1 71 0 195 375 156 0 chr10 18407444 18407572 -121909193 + L2 LINE L2 3116 3263 -9 361 346 53 14 chr10 18407842 18408125 -121908640 + L1ME2 LINE L1 134 427 -5969 2282 111 0 3 chr10 18408651 18408958 -121907807 + AluSc SINE Alu 1 306 -3 7011 248 74 62 chr10 18408995 18410046 -121906719 + L1ME2 LINE L1 790 1828 -4403 2338 92 0 13 chr10 18410046 18410360 -121906405 + AluSx SINE Alu 1 310 -2 7011 248 74 62 chr10 18410360 18411623 -121905142 + L1ME2 LINE L1 1828 3075 -3156 2332 91 7 0 chr10 18411623 18411920 -121904845 + AluSq SINE Alu 1 299 -14 7011 248 74 62 chr10 18411920 18413901 -121902864 + L1ME2 LINE L1 3075 5146 -1085 2383 59 3 0 chr10 18413901 18414191 -121902574 + AluY SINE Alu 1 291 -20 7011 248 74 62 chr10 18414191 18414631 -121902134 + L1ME2 LINE L1 5146 5579 -652 1504 215 130 0 chr10 18414642 18415042 -121901723 - MER66A LTR ERV1 0 478 27 1784 238 21 37 chr10 18415066 18415413 -121901352 + L1ME2 LINE L1 5609 5945 -288 2273 79 7 3 chr10 18415413 18415705 -121901060 + AluSg SINE Alu 1 293 -17 1784 238 21 37 chr10 18415705 18415925 -121900840 + L1ME2 LINE L1 5945 6167 -66 2293 98 13 0 chr10 18417686 18417993 -121898772 - AluSp SINE Alu -2 311 1 2192 117 7 0 chr10 18418341 18418649 -121898116 + AluSq SINE Alu 1 310 -3 189 304 22 0 chr10 18418691 18418737 -121898028 - MIR SINE MIR -127 81 35 328 211 18 83 chr10 18418918 18419027 -121897738 + MER5A DNA MER1_type 83 184 -5 510 223 105 46 chr10 18419591 18419829 -121896936 + MER112 DNA MER1_type 9 260 0 480 268 0 18 chr10 18421396 18421508 -121895257 - MIR3 SINE MIR -11 197 88 542 219 55 134 chr10 18422586 18422915 -121893850 - L1MC4 LINE L1 0 8042 7740 652 182 28 35 chr10 18423593 18423736 -121893029 + MIR SINE MIR 100 241 -21 588 266 23 12 chr10 18424376 18424549 -121892216 + L1ME LINE L1 20 194 -6202 * 1930 244 48 26 chr10 18424539 18425229 -121891536 + L1ME LINE L1 663 1367 -5029 601 258 56 48 chr10 18425216 18425468 -121891297 + L1ME1 LINE L1 5850 6103 -63 * 3074 163 14 64 chr10 18426453 18427105 -121889660 - L1MB8 LINE L1 -109 6069 5451 1862 173 7 13 chr10 18427108 18427414 -121889351 - AluJb SINE Alu -8 304 1 5767 213 25 14 chr10 18427445 18428894 -121887871 - L1MB8 LINE L1 -983 5163 3700 209 226 0 19 chr10 18429939 18429992 -121886773 + A-rich Low_complexity Low_complexity 2 53 0 382 180 180 0 chr10 18430024 18430124 -121886641 + FLAM_C SINE Alu 1 118 -15 377 249 63 91 chr10 18430145 18430366 -121886399 + L1ME LINE L1 3165 3379 -2836 233 281 111 46 chr10 18430545 18430933 -121885832 + L1ME LINE L1 3574 3986 -2229 2425 83 3 0 chr10 18431017 18431318 -121885447 - AluSp SINE Alu -11 302 1 309 267 86 76 chr10 18431332 18431437 -121885328 + MIR SINE MIR 5 110 -152 212 267 188 10 chr10 18431662 18431763 -121885002 - L2 LINE L2 0 3272 3154 1286 236 184 38 chr10 18431837 18432468 -121884297 + MER20B DNA MER1_type 1 723 -60 263 333 35 44 chr10 18432513 18432627 -121884138 - L2 LINE L2 -194 3078 2966 376 241 117 29 chr10 18432631 18432646 -121884119 + L1ME LINE L1 5514 5526 -664 2403 110 0 0 chr10 18432646 18432956 -121883809 - AluSx SINE Alu -2 310 1 376 241 117 29 chr10 18432956 18433077 -121883688 + L1ME LINE L1 5526 5662 -528 420 301 43 0 chr10 18433081 18433267 -121883498 + L1ME LINE L1 5698 5891 -299 458 247 86 84 chr10 18434120 18434498 -121882267 + MLT1I LTR MaLR 27 378 -31 255 61 0 0 chr10 18435643 18435676 -121881089 + (CAT)n Simple_repeat Simple_repeat 1 33 0 199 392 98 0 chr10 18435727 18435870 -121880895 + L2 LINE L2 2738 2894 -420 209 343 27 0 chr10 18436164 18436237 -121880528 + L2 LINE L2 3239 3313 0 234 221 132 0 chr10 18436268 18436336 -121880429 - MIR SINE MIR -105 157 81 2202 119 0 10 chr10 18436808 18437111 -121879654 - AluSx SINE Alu -12 300 1 240 209 0 0 chr10 18439366 18439409 -121877356 + MIR SINE MIR 105 147 -61 21 57 0 0 chr10 18439469 18439504 -121877261 + AT_rich Low_complexity Low_complexity 1 35 0 186 376 64 18 chr10 18439795 18439904 -121876861 - MIR SINE MIR -65 143 30 601 288 126 0 chr10 18440334 18440532 -121876233 + MIR SINE MIR 37 259 -3 185 288 17 0 chr10 18440550 18440609 -121876156 + MIR SINE MIR 203 262 0 21 57 0 0 chr10 18440638 18440673 -121876092 + AT_rich Low_complexity Low_complexity 1 35 0 2152 112 3 0 chr10 18440796 18441081 -121875684 + AluSp SINE Alu 1 286 -27 294 50 0 0 chr10 18441081 18441121 -121875644 + (CATA)n Simple_repeat Simple_repeat 2 41 0 226 224 60 15 chr10 18441557 18441624 -121875141 + MIR SINE MIR 69 138 -70 252 234 62 16 chr10 18441715 18441779 -121874986 - MER5A DNA MER1_type -120 69 3 2414 84 0 0 chr10 18443538 18443836 -121872929 - AluSc SINE Alu -11 298 1 2239 109 3 0 chr10 18445036 18445347 -121871418 - AluSx SINE Alu 0 312 1 1325 278 26 11 chr10 18446983 18447415 -121869350 + L1MC5 LINE L1 5297 5737 -597 1254 169 65 26 chr10 18447417 18447648 -121869117 + AluJb SINE Alu 3 242 -70 840 290 95 35 chr10 18447690 18448757 -121868008 + L1MC5 LINE L1 5721 6831 -977 575 263 11 60 chr10 18448910 18449195 -121867570 + L1MC5 LINE L1 6963 7233 -728 313 269 147 0 chr10 18449316 18449472 -121867293 + L1MC5 LINE L1 7292 7470 -491 1012 129 7 0 chr10 18449480 18449635 -121867130 + MER41A LTR ERV1 399 554 0 481 169 22 0 chr10 18449635 18449724 -121867041 + MER41A-int LTR ERV1 1 91 -5855 * 1461 114 38 0 chr10 18449720 18449930 -121866835 + MER41B-int LTR ERV1 5729 5946 0 3613 134 0 2 chr10 18449933 18450478 -121866287 + MER41B LTR ERV1 4 547 -88 262 260 21 31 chr10 18451114 18451210 -121865555 + L1ME LINE L1 658 752 -5453 1157 274 61 31 chr10 18451407 18452017 -121864748 + L1ME LINE L1 1121 1748 -4648 4089 159 45 46 chr10 18452034 18452946 -121863819 + L1MA9 LINE L1 4204 5114 -1032 5612 134 28 52 chr10 18452950 18454025 -121862740 + L1MA9 LINE L1 5264 6312 0 2413 269 123 17 chr10 18454071 18455434 -121861331 + L1ME LINE L1 2544 4050 -2165 1024 307 40 36 chr10 18455463 18455986 -121860779 + MLT1H1 LTR MaLR 30 549 0 1756 262 102 11 chr10 18455986 18456784 -121859981 + L1ME LINE L1 4045 4914 -1301 1895 168 0 9 chr10 18457139 18457454 -121859311 + AluJb SINE Alu 1 312 0 497 287 42 42 chr10 18459300 18459516 -121857249 + MIR SINE MIR 13 228 -34 302 323 19 92 chr10 18459692 18459826 -121856939 + MIR SINE MIR 21 163 -99 1931 151 0 0 chr10 18459826 18460159 -121856606 - AluSx SINE Alu 0 333 1 2105 130 0 34 chr10 18460168 18460490 -121856275 - AluSx SINE Alu -1 311 1 302 323 19 92 chr10 18460490 18460604 -121856161 + MIR SINE MIR 171 261 -1 358 207 47 18 chr10 18462270 18462385 -121854380 + (TA)n Simple_repeat Simple_repeat 2 125 -50 2073 101 24 3 chr10 18462385 18462673 -121854092 - AluSg SINE Alu -16 294 1 358 207 47 18 chr10 18462673 18462726 -121854039 + (TA)n Simple_repeat Simple_repeat 125 175 0 373 265 60 50 chr10 18463285 18463485 -121853280 + Charlie7 DNA MER1_type 59 260 -2352 2217 110 0 0 chr10 18463575 18463867 -121852898 + AluSx SINE Alu 1 292 -20 26 30 0 0 chr10 18463867 18463900 -121852865 + AT_rich Low_complexity Low_complexity 1 33 0 1905 103 22 7 chr10 18463914 18464187 -121852578 + AluSx SINE Alu 23 299 -13 202 209 100 73 chr10 18464188 18464298 -121852467 - MIR SINE MIR -91 171 59 820 267 30 45 chr10 18464364 18464701 -121852064 + Charlie7 DNA MER1_type 310 641 -1971 876 244 125 42 chr10 18464788 18465064 -121851701 + Charlie7 DNA MER1_type 800 1126 -1486 2604 49 0 0 chr10 18465064 18465368 -121851397 - AluY SINE Alu -6 305 2 876 244 125 42 chr10 18465368 18465522 -121851243 + Charlie7 DNA MER1_type 1126 1266 -1346 849 236 33 9 chr10 18465708 18465920 -121850845 - MIR SINE MIR -44 218 2 246 62 0 0 chr10 18465949 18465981 -121850784 + (TG)n Simple_repeat Simple_repeat 2 33 0 568 367 47 13 chr10 18466018 18466465 -121850300 + L1ME LINE L1 4910 5371 -844 380 307 63 24 chr10 18466506 18466711 -121850054 + L1ME LINE L1 5447 5659 -531 324 294 133 7 chr10 18466750 18466893 -121849872 + MLT1J LTR MaLR 5 165 -346 2175 118 17 0 chr10 18468099 18468395 -121848370 - AluSx SINE Alu -11 301 1 317 283 128 49 chr10 18468657 18468922 -121847843 + L1ME LINE L1 5338 5626 -495 2079 114 28 0 chr10 18469214 18469503 -121847262 + AluSx SINE Alu 1 297 -15 22 35 0 0 chr10 18469697 18469726 -121847039 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 18470102 18470123 -121846642 + AT_rich Low_complexity Low_complexity 1 21 0 456 253 109 35 chr10 18470352 18470526 -121846239 + MIR SINE MIR 38 224 -38 2196 117 3 0 chr10 18470556 18470865 -121845900 + AluSx SINE Alu 1 310 -2 214 227 0 91 chr10 18470959 18471025 -121845740 + L2 LINE L2 3252 3311 -2 254 330 21 21 chr10 18471231 18471325 -121845440 - MIR SINE MIR -86 122 29 2310 106 0 0 chr10 18472534 18472837 -121843928 + AluSx SINE Alu 1 303 -9 439 139 47 0 chr10 18474450 18474536 -121842229 + MER53 DNA DNA 6 95 -94 1575 87 5 28 chr10 18474938 18475156 -121841609 - AluSx SINE Alu -3 307 95 708 66 0 0 chr10 18475211 18475302 -121841463 - AluSx SINE Alu -221 91 1 267 326 76 0 chr10 18475372 18475464 -121841301 + MIR SINE MIR 31 129 -133 1773 135 29 4 chr10 18476005 18476309 -121840456 - AluSx SINE Alu 0 311 1 2147 105 51 0 chr10 18476950 18477246 -121839519 + AluSq SINE Alu 1 311 -2 3021 28 0 3 chr10 18478918 18479279 -121837486 + L1PA4 LINE L1 5793 6152 -3 191 381 125 6 chr10 18479437 18479597 -121837168 + L3 LINE CR1 67 245 -1332 291 275 64 28 chr10 18479658 18479767 -121836998 - L2 LINE L2 -146 3126 3014 2568 61 0 0 chr10 18481989 18482300 -121834465 - AluY SINE Alu 0 311 1 2094 145 0 0 chr10 18482400 18482704 -121834061 - AluSx SINE Alu -8 304 1 246 232 10 20 chr10 18482756 18482855 -121833910 + (CATATA)n Simple_repeat Simple_repeat 1 98 0 570 151 0 0 chr10 18484727 18484833 -121831932 + CT-rich Low_complexity Low_complexity 1 106 0 1721 153 0 31 chr10 18484833 18485127 -121831638 - AluJo SINE Alu -7 305 21 737 272 62 25 chr10 18485746 18485989 -121830776 + MIR SINE MIR 2 253 -9 1317 155 12 0 chr10 18486323 18486575 -121830190 + L1MA4 LINE L1 5994 6248 -52 27 0 0 0 chr10 18486576 18486603 -121830162 + AT_rich Low_complexity Low_complexity 1 27 0 917 187 14 147 chr10 18487757 18488179 -121828586 + L1 LINE L1 4914 5279 -867 2374 43 0 0 chr10 18488617 18488923 -121827842 + AluY SINE Alu 2 307 0 1167 202 4 4 chr10 18488993 18489236 -121827529 - L1ME1 LINE L1 -269 5897 5655 838 178 43 12 chr10 18489225 18489493 -121827272 - L1ME1 LINE L1 -723 5443 5170 * 960 202 39 53 chr10 18489501 18489783 -121826982 + L1ME1 LINE L1 5885 6162 -4 303 258 374 22 chr10 18490799 18490981 -121825784 + MIR SINE MIR 16 261 -1 2288 71 0 0 chr10 18491541 18491863 -121824902 + AluY SINE Alu 1 322 0 297 75 0 0 chr10 18492525 18492565 -121824200 + (GA)n Simple_repeat Simple_repeat 1 40 0 181 325 134 75 chr10 18492645 18492973 -121823792 - L2 LINE L2 -348 2966 2659 1783 100 0 0 chr10 18492973 18493203 -121823562 - AluSg SINE Alu -31 279 50 181 325 134 75 chr10 18493203 18493348 -121823417 - L2 LINE L2 -655 2659 2524 2301 108 0 22 chr10 18493348 18493662 -121823103 + AluSx SINE Alu 1 307 -5 181 325 134 75 chr10 18493662 18493775 -121822990 - L2 LINE L2 -790 2524 2344 418 230 16 0 chr10 18493893 18493997 -121822768 + MER5A DNA MER1_type 4 109 -80 923 255 117 44 chr10 18494134 18494675 -121822090 - HAL1 LINE L1 -1293 1214 635 2065 96 36 23 chr10 18495122 18495424 -121821341 + AluSx SINE Alu 1 306 -6 2033 130 9 41 chr10 18497610 18497925 -121818840 - AluSg SINE Alu -4 306 2 271 336 67 8 chr10 18498028 18498147 -121818618 - L2 LINE L2 -5 3267 3142 466 194 229 21 chr10 18498586 18498730 -121818035 - L1MDb LINE L1 -4626 1780 1607 2168 113 3 0 chr10 18498730 18499032 -121817733 - AluSc SINE Alu -6 303 1 906 184 3 30 chr10 18499049 18499303 -121817462 - L1MDa LINE L1 -4933 1473 1228 422 110 35 179 chr10 18499298 18499443 -121817322 + L1MDa LINE L1 1457 1580 -4826 * 2338 217 104 25 chr10 18499499 18500551 -121816214 - L1MDb LINE L1 -5187 1219 8 517 170 107 27 chr10 18500797 18500909 -121815856 - L2 LINE L2 0 3313 3193 2026 106 11 7 chr10 18502538 18502860 -121813905 + AluSx SINE Alu 1 323 0 1088 147 5 5 chr10 18504950 18505148 -121811617 - L1MB3 LINE L1 0 6183 5986 1904 171 5 13 chr10 18505150 18505535 -121811230 - L1MB3 LINE L1 -295 5888 5507 22 80 0 0 chr10 18506210 18506260 -121810505 + AT_rich Low_complexity Low_complexity 1 50 0 4203 173 33 10 chr10 18507063 18507950 -121808815 - L1MB7 LINE L1 -24 6160 5254 207 100 0 0 chr10 18508568 18508598 -121808167 + (TG)n Simple_repeat Simple_repeat 1 30 0 294 68 23 0 chr10 18508629 18508673 -121808092 - MADE1 DNA Mariner 0 80 36 408 125 111 0 chr10 18508706 18508778 -121807987 - MADE1 DNA Mariner 0 80 1 22 80 0 0 chr10 18509260 18509310 -121807455 + AT_rich Low_complexity Low_complexity 1 50 0 537 305 176 0 chr10 18509357 18509544 -121807221 - MIR SINE MIR -28 234 15 24 77 0 0 chr10 18512095 18512147 -121804618 + AT_rich Low_complexity Low_complexity 1 52 0 2018 99 39 18 chr10 18512510 18512793 -121803972 + AluSx SINE Alu 1 289 -23 2203 126 0 0 chr10 18513806 18514107 -121802658 - AluSx SINE Alu -11 301 1 235 272 204 0 chr10 18514197 18514388 -121802377 + L1MC4a LINE L1 5730 5959 -1849 203 0 0 36 chr10 18516506 18516534 -121800231 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 23 0 0 0 chr10 18516659 18516682 -121800083 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr10 18517105 18517138 -121799627 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr10 18517833 18517854 -121798911 + AT_rich Low_complexity Low_complexity 1 21 0 2364 90 0 7 chr10 18518033 18518343 -121798422 - AluSg1 SINE Alu -1 308 1 192 40 0 0 chr10 18519820 18519845 -121796920 + (A)n Simple_repeat Simple_repeat 1 25 0 984 105 8 0 chr10 18520000 18520133 -121796632 + AluSq/x SINE Alu 3 136 -177 1464 158 0 0 chr10 18520133 18520354 -121796411 + AluSx SINE Alu 1 221 -91 19534 34 2 1 chr10 18520937 18524104 -121792661 + L1PA4 LINE L1 2983 6154 -1 206 289 0 0 chr10 18524684 18524729 -121792036 + L2 LINE L2 3136 3180 -92 499 266 70 0 chr10 18524917 18525045 -121791720 + MIR SINE MIR 55 191 -71 1763 166 3 0 chr10 18525594 18525877 -121790888 + AluJo SINE Alu 1 284 -28 30 0 0 0 chr10 18525877 18525907 -121790858 + AT_rich Low_complexity Low_complexity 1 30 0 2129 119 73 14 chr10 18526044 18526388 -121790377 + THE1B LTR MaLR 1 364 0 210 192 61 131 chr10 18526668 18526767 -121789998 - MIR SINE MIR -78 130 34 244 352 16 0 chr10 18528545 18528670 -121788095 - L1M4 LINE L1 -1988 4158 4032 279 0 0 0 chr10 18528684 18528715 -121788050 + (TG)n Simple_repeat Simple_repeat 2 32 0 1120 235 167 51 chr10 18528715 18529187 -121787578 + MER76 LTR ERV 162 688 0 448 259 0 0 chr10 18529340 18529452 -121787313 - HAL1b LINE L1 -659 689 578 246 328 86 0 chr10 18529458 18529586 -121787179 - HAL1b LINE L1 -1110 238 100 1002 267 73 50 chr10 18529592 18529948 -121786817 + L1ME1 LINE L1 1242 1588 -4808 892 133 0 15 chr10 18529948 18530083 -121786682 + FLAM_C SINE Alu 1 133 0 1002 267 73 50 chr10 18530083 18530566 -121786199 + L1ME1 LINE L1 1588 2100 -4296 1374 226 92 68 chr10 18530677 18531278 -121785487 + L1ME1 LINE L1 5605 6219 -16 2187 102 34 0 chr10 18531341 18531635 -121785130 - AluSg SINE Alu -6 304 1 307 167 30 0 chr10 18532696 18532762 -121784003 - L1MB7 LINE L1 0 6184 6117 1989 141 0 17 chr10 18534747 18535074 -121781691 - AluSx SINE Alu 0 322 1 300 27 0 0 chr10 18535286 18535323 -121781442 + (CA)n Simple_repeat Simple_repeat 2 38 0 2102 146 0 0 chr10 18535967 18536269 -121780496 + AluSx SINE Alu 2 303 -9 25 31 0 0 chr10 18536309 18536341 -121780424 + AT_rich Low_complexity Low_complexity 1 32 0 33 80 0 0 chr10 18537077 18537152 -121779613 + AT_rich Low_complexity Low_complexity 1 75 0 356 326 80 71 chr10 18537166 18537589 -121779176 + L3b LINE CR1 1149 1575 -8 2310 94 7 0 chr10 18537832 18538130 -121778635 + AluSq SINE Alu 2 301 -12 433 314 72 43 chr10 18538602 18538879 -121777886 + MLT1J LTR MaLR 25 309 -202 311 311 37 44 chr10 18538941 18539076 -121777689 + L2 LINE L2 3139 3272 0 856 289 73 74 chr10 18539415 18539980 -121776785 + MLT1K LTR MaLR 2 565 -23 247 265 165 9 chr10 18540439 18540614 -121776151 + L1ME LINE L1 5373 5567 -554 289 282 45 18 chr10 18540869 18540979 -121775786 + HAL1b LINE L1 1227 1339 -9 2186 108 0 3 chr10 18541002 18541288 -121775477 - AluSg SINE Alu -24 286 2 44 35 0 0 chr10 18541978 18542036 -121774729 + AT_rich Low_complexity Low_complexity 1 58 0 610 261 43 0 chr10 18542528 18542689 -121774076 + MIR SINE MIR 38 205 -57 6378 39 22 0 chr10 18542842 18543662 -121773103 + L1PA5 LINE L1 5342 6178 0 411 318 50 31 chr10 18543666 18543787 -121772978 + L1ME4a LINE L1 5530 5647 -474 2277 178 95 28 chr10 18543787 18544260 -121772505 + MLT1D LTR MaLR 1 505 0 411 318 50 31 chr10 18544260 18544497 -121772268 + L1ME4a LINE L1 5647 5895 -226 311 350 19 25 chr10 18544619 18544776 -121771989 + L2 LINE L2 3158 3313 0 22 0 0 0 chr10 18544848 18544870 -121771895 + AT_rich Low_complexity Low_complexity 1 22 0 610 269 32 76 chr10 18545051 18545300 -121771465 - L2 LINE L2 0 3313 3076 28 86 0 0 chr10 18545531 18545601 -121771164 + AT_rich Low_complexity Low_complexity 1 70 0 201 239 45 30 chr10 18545896 18545963 -121770802 - L3 LINE CR1 -64 1513 1446 247 183 164 67 chr10 18545995 18546099 -121770666 - L2 LINE L2 0 3313 3200 1006 280 69 25 chr10 18548385 18549003 -121767762 - L2 LINE L2 -85 3228 2579 581 299 108 20 chr10 18549670 18549921 -121766844 - L2 LINE L2 -705 2609 2337 6440 201 42 9 chr10 18550365 18550654 -121766111 + L1PA16 LINE L1 3879 4157 -2009 2103 96 4 0 chr10 18550654 18550926 -121765839 + AluSx SINE Alu 1 273 -39 6440 201 42 9 chr10 18550926 18552223 -121764542 + L1PA16 LINE L1 4157 5537 -629 2204 112 3 10 chr10 18552223 18552537 -121764228 + AluSq SINE Alu 1 312 -1 6440 201 42 9 chr10 18552537 18553189 -121763576 + L1PA16 LINE L1 5537 6166 0 766 271 105 90 chr10 18554216 18554750 -121762015 + LTR67 LTR ERVL 3 544 -13 4194 167 52 23 chr10 18555150 18555325 -121761440 + L1MB4 LINE L1 5215 5384 -796 2414 84 0 3 chr10 18555325 18555633 -121761132 + AluSq SINE Alu 3 309 -4 4194 167 52 23 chr10 18555633 18556399 -121760366 + L1MB4 LINE L1 5384 6180 0 206 271 157 0 chr10 18556525 18556595 -121760170 + MIR SINE MIR 2 82 -180 414 359 118 13 chr10 18557137 18557441 -121759324 - L2 LINE L2 -437 2877 2542 410 158 49 0 chr10 18558188 18558270 -121758495 + L2 LINE L2 3224 3309 -4 227 277 252 7 chr10 18558400 18558555 -121758210 - MIR SINE MIR 0 262 70 5197 133 34 15 chr10 18559943 18560815 -121755950 - MER4D LTR ERV1 0 903 15 242 291 209 12 chr10 18561185 18561271 -121755494 + MIR SINE MIR 44 146 -62 358 281 240 29 chr10 18563098 18563340 -121753425 - L3 LINE CR1 -7 1570 1278 1059 100 7 0 chr10 18563341 18563481 -121753284 + AluSq/x SINE Alu 1 141 -172 2112 108 7 0 chr10 18563486 18563774 -121752991 + AluSq SINE Alu 1 290 -23 338 294 168 28 chr10 18563812 18564026 -121752739 + MIR SINE MIR 14 257 -5 272 141 8 6 chr10 18564616 18564738 -121752027 + AluSp SINE Alu 121 322 0 605 200 212 0 chr10 18564860 18565030 -121751735 - MER3 DNA MER1_type -3 206 1 2103 128 17 0 chr10 18565363 18565660 -121751105 - AluSx SINE Alu -10 302 1 329 238 19 6 chr10 18566625 18566785 -121749980 + (TA)n Simple_repeat Simple_repeat 1 162 0 207 139 0 0 chr10 18567183 18567219 -121749546 + (CA)n Simple_repeat Simple_repeat 2 37 0 21 0 0 0 chr10 18567459 18567480 -121749285 + AT_rich Low_complexity Low_complexity 1 21 0 1624 153 4 4 chr10 18568470 18568718 -121748047 - AluSx SINE Alu -64 248 1 403 271 0 0 chr10 18569615 18569700 -121747065 + AluJ/FLAM SINE Alu 7 91 -221 297 0 0 0 chr10 18569702 18569735 -121747030 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 1140 133 6 6 chr10 18569742 18569915 -121746850 + FRAM SINE Alu 1 169 -7 477 76 0 0 chr10 18570418 18570484 -121746281 + (GA)n Simple_repeat Simple_repeat 1 66 0 420 296 174 10 chr10 18571028 18571224 -121745541 - MIR SINE MIR -7 255 28 1495 191 21 32 chr10 18571296 18571579 -121745186 - AluJb SINE Alu -22 290 11 22 0 0 0 chr10 18571835 18571857 -121744908 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr10 18571907 18571934 -121744831 + AT_rich Low_complexity Low_complexity 1 27 0 860 192 0 30 chr10 18572653 18572820 -121743945 - MER5A DNA MER1_type -26 163 2 1644 176 14 20 chr10 18574429 18574724 -121742041 + AluJb SINE Alu 4 296 -16 2191 81 7 0 chr10 18574852 18575123 -121741642 - AluSq SINE Alu -28 285 13 547 251 163 19 chr10 18575870 18576085 -121740680 + MIR SINE MIR 5 250 -12 2113 125 17 0 chr10 18576250 18576546 -121740219 + AluSx SINE Alu 1 301 -11 23 0 0 0 chr10 18577139 18577162 -121739603 + AT_rich Low_complexity Low_complexity 1 23 0 2859 109 5 9 chr10 18577424 18577517 -121739248 + L1PA13 LINE L1 5734 5826 -337 2374 87 10 0 chr10 18577517 18577815 -121738950 + AluSx SINE Alu 1 301 -11 2859 109 5 9 chr10 18577815 18578153 -121738612 + L1PA13 LINE L1 5826 6163 0 273 57 0 0 chr10 18578323 18578358 -121738407 + (A)n Simple_repeat Simple_repeat 1 35 0 2350 103 79 0 chr10 18578992 18579321 -121737444 + MER1A DNA MER1_type 175 529 0 2386 104 0 0 chr10 18579496 18579805 -121736960 - AluSc SINE Alu 0 309 1 2805 159 11 0 chr10 18580380 18580838 -121735927 - L1PA16 LINE L1 -5 6161 5699 285 302 75 19 chr10 18581345 18581451 -121735314 + L2 LINE L2 3161 3272 0 241 184 92 40 chr10 18581473 18581549 -121735216 + MIR SINE MIR 175 254 -8 358 208 38 47 chr10 18581610 18581716 -121735049 - L2 LINE L2 -37 3276 3172 1583 152 42 8 chr10 18581749 18582012 -121734753 + AluJo SINE Alu 1 272 -40 243 0 0 0 chr10 18582018 18582045 -121734720 + (TC)n Simple_repeat Simple_repeat 2 28 0 2433 70 0 10 chr10 18582128 18582442 -121734323 + AluY SINE Alu 1 311 0 182 317 61 72 chr10 18583090 18583270 -121733495 + MIR SINE MIR 32 209 -53 1441 155 88 20 chr10 18584060 18584311 -121732454 - AluJb SINE Alu -22 290 23 890 56 0 0 chr10 18588477 18588584 -121728181 - AluSg/x SINE Alu -14 296 190 2218 120 0 0 chr10 18590528 18590820 -121725945 - AluSx SINE Alu -20 292 1 2018 128 4 0 chr10 18591673 18591987 -121724778 - AluSx SINE Alu 0 315 1 381 322 91 14 chr10 18592999 18593207 -121723558 - MIR SINE MIR -28 234 11 21 36 0 0 chr10 18595446 18595474 -121721291 + AT_rich Low_complexity Low_complexity 1 28 0 796 197 0 0 chr10 18595595 18595732 -121721033 - AluJo SINE Alu -16 296 160 864 155 27 7 chr10 18595793 18595941 -121720824 - AluJo SINE Alu -161 151 1 1842 187 0 0 chr10 18596555 18596854 -121719911 + AluSx SINE Alu 1 299 -13 292 238 0 0 chr10 18596918 18596981 -121719784 - MER94 DNA DNA -11 123 61 21 0 0 0 chr10 18597329 18597350 -121719415 + AT_rich Low_complexity Low_complexity 1 21 0 1849 129 0 0 chr10 18597470 18597725 -121719040 + AluSx SINE Alu 42 296 -16 1013 154 85 0 chr10 18597732 18597920 -121718845 + L1PA16 LINE L1 5958 6161 -5 857 179 20 0 chr10 18598534 18598685 -121718080 + MLT1A1 LTR MaLR 3 156 -209 1663 188 3 11 chr10 18598685 18599006 -121717759 + AluJb SINE Alu 1 319 0 1385 165 18 33 chr10 18599008 18599280 -121717485 + AluJo SINE Alu 21 288 -24 1246 155 24 9 chr10 18599280 18599493 -121717272 + MLT1A1 LTR MaLR 150 365 0 2021 169 15 40 chr10 18599609 18599931 -121716834 - MLT1B LTR MaLR 0 390 78 2194 131 3 0 chr10 18599931 18600229 -121716536 - AluSx SINE Alu -13 299 1 2021 169 15 40 chr10 18600229 18600303 -121716462 - MLT1B LTR MaLR -312 78 4 189 0 0 0 chr10 18600460 18600481 -121716284 + (T)n Simple_repeat Simple_repeat 1 21 0 261 229 135 94 chr10 18600702 18600798 -121715967 - L2 LINE L2 -36 3236 3137 311 289 40 83 chr10 18601172 18601449 -121715316 - L1M4b LINE L1 -5280 1579 1315 216 0 0 0 chr10 18602038 18602062 -121714703 + (TG)n Simple_repeat Simple_repeat 2 25 0 419 162 68 0 chr10 18602100 18602174 -121714591 + Tigger5 DNA MER2_type 1 79 -2244 235 264 0 0 chr10 18602183 18602236 -121714529 + Tigger5 DNA MER2_type 2271 2323 0 * 365 265 162 43 chr10 18602234 18602419 -121714346 - MLT1G1 LTR MaLR 0 567 361 609 267 75 41 chr10 18602496 18602788 -121713977 - MLT1G1 LTR MaLR -314 235 1 245 276 0 0 chr10 18602806 18602864 -121713901 + Tigger5 DNA MER2_type 21 78 -2245 2034 125 26 0 chr10 18602988 18603291 -121713474 + AluSq SINE Alu 1 311 -2 1021 192 44 125 chr10 18603419 18603804 -121712961 - MLT1A2 LTR MaLR -6 368 15 302 321 9 0 chr10 18603806 18603915 -121712850 + L1M4 LINE L1 3646 3755 -2391 1216 320 62 2 chr10 18603920 18604358 -121712407 - LTR16B LTR ERVL 0 464 1 424 304 77 66 chr10 18604418 18604518 -121712247 + L1M4 LINE L1 3796 3893 -2253 1535 181 0 87 chr10 18604518 18604850 -121711915 + AluJb SINE Alu 9 311 -1 424 304 77 66 chr10 18604850 18604873 -121711892 + L1M4 LINE L1 3893 3914 -2232 3858 122 16 26 chr10 18604873 18605447 -121711318 + MER61E LTR ERV1 2 569 0 424 304 77 66 chr10 18605447 18605553 -121711212 + L1M4 LINE L1 3914 4017 -2129 1613 172 4 15 chr10 18605553 18605826 -121710939 + AluSx SINE Alu 36 305 -7 424 304 77 66 chr10 18605826 18605948 -121710817 + L1M4 LINE L1 4017 4136 -2010 1617 210 0 23 chr10 18605948 18606248 -121710517 + AluJb SINE Alu 1 293 -19 424 304 77 66 chr10 18606248 18606265 -121710500 + L1M4 LINE L1 4136 4151 -1995 2309 100 3 3 chr10 18606265 18606566 -121710199 + AluY SINE Alu 1 301 -10 424 304 77 66 chr10 18606566 18606647 -121710118 + L1M4 LINE L1 4151 4254 -1892 509 108 0 12 chr10 18606699 18606782 -121709983 + (ATAAG)n Simple_repeat Simple_repeat 1 82 0 499 356 40 67 chr10 18608338 18608819 -121707946 - ERVL LTR ERVL -1466 4188 3695 2218 112 3 0 chr10 18608819 18609114 -121707651 - AluSx SINE Alu -16 296 1 499 356 40 67 chr10 18609114 18609644 -121707121 - ERVL LTR ERVL -1959 3695 3117 3786 321 43 17 chr10 18610097 18610596 -121706169 - ERVL LTR ERVL -1905 3091 2607 2142 134 3 0 chr10 18610596 18610894 -121705871 + AluSx SINE Alu 1 299 -13 3786 321 43 17 chr10 18610894 18611959 -121704806 - ERVL LTR ERVL -2389 2607 1421 1164 284 53 39 chr10 18612034 18612113 -121704652 - LTR16B LTR ERVL 0 464 388 2200 120 63 20 chr10 18612113 18612462 -121704303 + THE1B LTR MaLR 1 364 0 1164 284 53 39 chr10 18612462 18612815 -121703950 - LTR16B LTR ERVL -76 388 26 1732 140 125 74 chr10 18613112 18613519 -121703246 + MSTA LTR MaLR 1 428 0 546 244 27 76 chr10 18613565 18613790 -121702975 + L2 LINE L2 3100 3313 0 473 275 81 6 chr10 18613882 18614042 -121702723 - MIR SINE MIR -80 182 11 285 143 157 14 chr10 18614968 18615038 -121701727 - MADE1 DNA Mariner 0 80 1 198 150 0 0 chr10 18615252 18615292 -121701473 + (GA)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr10 18615576 18615597 -121701168 + AT_rich Low_complexity Low_complexity 1 21 0 257 317 20 40 chr10 18615806 18615934 -121700831 + MIR SINE MIR 38 163 -63 2311 116 0 0 chr10 18616007 18616317 -121700448 + AluSx SINE Alu 2 311 -1 389 269 174 0 chr10 18616416 18616565 -121700200 - MER5A DNA MER1_type -1 188 14 2095 108 0 21 chr10 18616754 18617064 -121699701 + AluSx SINE Alu 1 304 0 1304 203 5 0 chr10 18617159 18617381 -121699384 + AluJo SINE Alu 1 223 -89 285 344 33 0 chr10 18617459 18617581 -121699184 + MIR SINE MIR 6 131 -131 485 200 105 0 chr10 18617717 18617822 -121698943 - FLAM_A SINE Alu -17 125 10 198 311 112 15 chr10 18617906 18618045 -121698720 + MIR SINE MIR 35 188 -58 1875 141 37 7 chr10 18618108 18618405 -121698360 - AluSq SINE Alu 0 313 8 1612 149 4 47 chr10 18618520 18618795 -121697970 - AluSx SINE Alu -49 263 1 246 339 51 0 chr10 18619185 18619303 -121697462 + MIR3 SINE MIR 40 163 -45 2487 153 10 0 chr10 18619349 18619747 -121697018 - MER57A LTR ERV1 -1 402 1 4283 102 29 2 chr10 18619772 18620388 -121696377 + LTR10E LTR ERV1 1 633 0 4855 81 17 4 chr10 18620861 18621876 -121694889 - MER11A LTR ERVK 0 1266 1 378 0 0 0 chr10 18621915 18621957 -121694808 + (T)n Simple_repeat Simple_repeat 1 42 0 685 152 0 0 chr10 18622801 18622900 -121693865 + AluSg/x SINE Alu 195 293 -16 1791 155 0 10 chr10 18623508 18623799 -121692966 + AluSx SINE Alu 1 288 -24 342 114 0 0 chr10 18623814 18623858 -121692907 + Alu SINE Alu 1 44 -258 1452 174 27 19 chr10 18623858 18624066 -121692699 - THE1-int LTR MaLR -592 988 776 1751 112 0 0 chr10 18624066 18624299 -121692466 - AluSc SINE Alu -48 261 29 1963 118 0 24 chr10 18624299 18624587 -121692178 + THE1-int LTR MaLR 708 988 -592 299 136 0 0 chr10 18624587 18624631 -121692134 - AluSc SINE Alu -256 44 1 1869 155 0 10 chr10 18624647 18624937 -121691828 - AluSx SINE Alu -25 287 1 1768 123 0 0 chr10 18627054 18627297 -121689468 + AluSx SINE Alu 43 285 -27 2175 126 0 7 chr10 18627900 18628209 -121688556 - AluSx SINE Alu -3 309 3 1831 162 3 30 chr10 18628567 18628870 -121687895 + AluJb SINE Alu 1 295 -17 532 172 98 8 chr10 18628872 18628994 -121687771 + FLAM_C SINE Alu 1 133 0 353 247 59 0 chr10 18629022 18629107 -121687658 - L2 LINE L2 -32 3281 3192 234 150 0 0 chr10 18629110 18629150 -121687615 + (TATATG)n Simple_repeat Simple_repeat 1 40 0 370 199 15 23 chr10 18629180 18629311 -121687454 + (TA)n Simple_repeat Simple_repeat 1 130 0 242 109 0 0 chr10 18629336 18629382 -121687383 + LTR66 LTR ERVL 394 439 -171 2463 163 62 57 chr10 18630076 18630673 -121686092 - LTR18B LTR ERVL -14 600 1 261 0 0 0 chr10 18631041 18631070 -121685695 + (CA)n Simple_repeat Simple_repeat 1 29 0 245 95 0 24 chr10 18631330 18631372 -121685393 + (TTTC)n Simple_repeat Simple_repeat 4 44 0 608 159 29 0 chr10 18631403 18631541 -121685224 + CT-rich Low_complexity Low_complexity 2 143 0 1595 193 7 17 chr10 18631564 18631860 -121684905 - AluJo SINE Alu -19 293 1 802 256 18 27 chr10 18632064 18632287 -121684478 - MER58A DNA MER1_type 0 224 4 1733 174 166 38 chr10 18633350 18633797 -121682968 - MLT1D LTR MaLR 0 505 2 1014 249 25 8 chr10 18634545 18634901 -121681864 + LTR10B LTR ERV1 157 505 0 545 320 98 52 chr10 18635670 18635880 -121680885 + L1ME LINE L1 2758 2957 -3189 2154 132 0 3 chr10 18635880 18636183 -121680582 + AluSx SINE Alu 1 302 -10 545 320 98 52 chr10 18636183 18636237 -121680528 + L1ME LINE L1 2957 3007 -3139 2035 204 69 55 chr10 18636237 18636834 -121679931 - MER77 LTR ERV1 0 605 1 545 320 98 52 chr10 18636834 18637243 -121679522 + L1ME LINE L1 3007 3463 -2683 342 289 50 16 chr10 18637316 18637437 -121679328 - LTR16C LTR ERVL -366 125 1 355 271 116 57 chr10 18637478 18637662 -121679103 + L1ME LINE L1 5413 5585 -536 186 43 0 0 chr10 18637662 18637685 -121679080 + (TG)n Simple_repeat Simple_repeat 2 24 0 355 271 116 57 chr10 18637685 18637888 -121678877 + L1ME LINE L1 5585 5822 -299 757 189 8 0 chr10 18637893 18638025 -121678740 + FLAM_C SINE Alu 1 133 -10 33 0 0 0 chr10 18638027 18638060 -121678705 + AT_rich Low_complexity Low_complexity 1 33 0 1655 128 201 17 chr10 18638366 18638724 -121678041 - MSTA LTR MaLR -4 424 1 267 76 24 11 chr10 18638878 18638934 -121677831 - MLT2B1 LTR ERVL 0 520 482 404 209 23 0 chr10 18638972 18639144 -121677621 + (TAGA)n Simple_repeat Simple_repeat 4 179 0 1503 139 85 29 chr10 18639146 18639477 -121677288 + THE1C LTR MaLR 3 405 -21 10270 120 32 10 chr10 18639479 18641025 -121675740 + THE1C-int LTR MaLR 1 1580 0 1673 169 52 35 chr10 18641025 18641392 -121675373 + THE1C LTR MaLR 1 373 -2 190 185 46 0 chr10 18641416 18641481 -121675284 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 814 68 20 27 chr10 18641482 18641628 -121675137 + (GAAA)n Simple_repeat Simple_repeat 4 148 0 2053 223 4 24 chr10 18641629 18642091 -121674674 - MLT2B2 LTR ERVL -62 453 1 299 284 39 0 chr10 18642224 18642326 -121674439 + MER103 DNA DNA 8 113 -53 2279 127 19 101 chr10 18642790 18642879 -121673886 - MSTA LTR MaLR 0 428 333 1932 121 0 44 chr10 18642879 18643177 -121673588 - AluSx SINE Alu -27 285 1 2279 127 19 101 chr10 18643177 18643353 -121673412 - MSTA LTR MaLR -95 333 215 2302 100 7 0 chr10 18643353 18643652 -121673113 - AluSp SINE Alu -12 301 1 2279 127 19 101 chr10 18643652 18643851 -121672914 - MSTA LTR MaLR -213 215 1 681 248 55 39 chr10 18644091 18644345 -121672420 - LTR16B LTR ERVL -1 463 206 2795 112 109 69 chr10 18644725 18645204 -121671561 + MER4A LTR ERV1 17 528 -136 2197 99 0 3 chr10 18645204 18645496 -121671269 + AluY SINE Alu 1 291 -20 2795 112 109 69 chr10 18645496 18645639 -121671126 + MER4A LTR ERV1 528 664 0 2480 73 0 0 chr10 18647119 18647422 -121669343 - AluY SINE Alu -8 303 1 1948 121 60 0 chr10 18648382 18648663 -121668102 + AluSx SINE Alu 1 298 -14 304 338 62 31 chr10 18649024 18649184 -121667581 + MIR SINE MIR 8 172 -90 426 152 9 48 chr10 18649313 18649332 -121667433 - L1MA9 LINE L1 -24 6288 6270 1795 155 3 30 chr10 18649332 18649629 -121667136 + AluJb SINE Alu 1 289 -23 426 152 9 48 chr10 18649629 18649714 -121667051 - L1MA9 LINE L1 -42 6270 6188 2349 135 42 35 chr10 18649755 18649790 -121666975 - L1MA9 LINE L1 -114 6198 6165 180 111 0 0 chr10 18649790 18649817 -121666948 + (TG)n Simple_repeat Simple_repeat 2 28 0 2349 135 42 35 chr10 18649817 18650263 -121666502 - L1MA9 LINE L1 -147 6165 5714 1848 151 3 10 chr10 18650789 18651088 -121665677 - AluJo SINE Alu -15 297 1 198 150 33 17 chr10 18651322 18651382 -121665383 + (TG)n Simple_repeat Simple_repeat 2 62 0 2251 123 0 0 chr10 18651492 18651800 -121664965 - AluSx SINE Alu -4 308 1 2429 60 0 19 chr10 18652321 18652636 -121664129 - AluY SINE Alu -2 309 1 1960 137 32 0 chr10 18652941 18653225 -121663540 - AluSx SINE Alu -19 293 1 1792 175 21 0 chr10 18653228 18653519 -121663246 - AluJo SINE Alu -15 297 1 1829 166 0 44 chr10 18654003 18654323 -121662442 + AluJo SINE Alu 1 306 -6 1664 192 0 3 chr10 18654485 18654772 -121661993 - AluJo SINE Alu -26 286 1 2129 130 33 28 chr10 18655356 18655718 -121661047 - THE1B LTR MaLR 0 364 1 1914 159 6 13 chr10 18656522 18656954 -121659811 + AluJb SINE Alu 1 430 0 245 274 116 21 chr10 18657138 18657233 -121659532 + MIR SINE MIR 70 173 -89 1642 182 17 14 chr10 18657679 18657976 -121658789 + AluJo SINE Alu 1 298 -14 5889 71 5 0 chr10 18658139 18658942 -121657823 - L1PA7 LINE L1 0 6154 5348 253 211 19 0 chr10 18659604 18659656 -121657109 + MER94 DNA DNA 82 134 0 21 0 0 0 chr10 18659668 18659689 -121657076 + AT_rich Low_complexity Low_complexity 1 21 0 300 323 54 6 chr10 18659869 18660036 -121656729 - L1ME LINE L1 -451 5719 5545 1297 218 159 49 chr10 18661094 18663053 -121653712 + SATR1 Satellite Satellite 1 2173 -413 1944 116 0 11 chr10 18663055 18663332 -121653433 - AluSx SINE Alu -38 274 1 335 251 154 69 chr10 18663766 18663938 -121652827 + MLT1L LTR MaLR 11 167 -448 2173 114 3 0 chr10 18663938 18664235 -121652530 + AluSg SINE Alu 1 298 -12 504 0 0 0 chr10 18664236 18664292 -121652473 + (AATAG)n Simple_repeat Simple_repeat 1 56 0 335 251 154 69 chr10 18664292 18664364 -121652401 + MLT1L LTR MaLR 166 278 -337 246 254 34 0 chr10 18664717 18664776 -121651989 + MIR SINE MIR 188 248 -14 312 70 0 0 chr10 18665019 18665062 -121651703 + (CA)n Simple_repeat Simple_repeat 1 43 0 538 341 52 13 chr10 18665345 18665574 -121651191 + MIR SINE MIR 11 248 -14 339 130 0 0 chr10 18665581 18665635 -121651130 - AluSx SINE Alu -12 290 237 313 0 0 0 chr10 18665633 18665670 -121651095 - tRNA-Gly-GGA tRNA tRNA -38 37 1 * 1504 157 4 20 chr10 18665677 18665926 -121650839 - AluSx SINE Alu -67 245 1 1122 248 99 39 chr10 18666125 18666531 -121650234 + L1ME LINE L1 22 467 -5929 1951 146 31 34 chr10 18666531 18666887 -121649878 - THE1A LTR MaLR 0 355 1 1122 248 99 39 chr10 18666887 18666993 -121649772 + L1ME LINE L1 467 565 -5831 1526 196 8 43 chr10 18666997 18667349 -121649416 + MER6A DNA MER2_type 1 340 -265 2112 254 50 64 chr10 18667429 18667794 -121648971 + L1ME LINE L1 634 1003 -5393 1692 214 14 14 chr10 18667794 18668159 -121648606 + MLT1A1 LTR MaLR 1 365 0 2112 254 50 64 chr10 18668159 18669008 -121647757 + L1ME LINE L1 1003 1831 -4565 6302 90 5 1 chr10 18669008 18670206 -121646559 + L1PA8A LINE L1 4925 6126 -5 1588 149 6 98 chr10 18670276 18670592 -121646173 - AluJo SINE Alu -25 287 1 305 196 39 20 chr10 18670599 18670701 -121646064 + L1ME LINE L1 1841 1944 -4452 3076 258 94 4 chr10 18670703 18672017 -121644748 + L1ME LINE L1 2239 3671 -2544 1779 223 85 25 chr10 18672047 18672922 -121643843 + L1ME LINE L1 4746 5672 -563 207 0 0 0 chr10 18673040 18673063 -121643702 + (TTA)n Simple_repeat Simple_repeat 3 25 0 379 329 137 35 chr10 18673283 18673706 -121643059 - L3b LINE CR1 -10 1573 1108 1989 145 0 3 chr10 18674454 18674750 -121642015 - AluSx SINE Alu -17 295 1 22 0 0 0 chr10 18674756 18674778 -121641987 + AT_rich Low_complexity Low_complexity 1 22 0 642 197 40 88 chr10 18674972 18675088 -121641677 - L1ME2 LINE L1 -173 5991 5871 2147 120 0 3 chr10 18675088 18675388 -121641377 - AluSx SINE Alu -13 299 1 642 197 40 88 chr10 18675388 18675461 -121641304 - L1ME2 LINE L1 -293 5871 5843 2109 120 147 5 chr10 18675461 18675836 -121640929 + MSTA LTR MaLR 1 428 0 642 197 40 88 chr10 18675836 18675920 -121640845 - L1ME2 LINE L1 -321 5843 5757 365 261 18 18 chr10 18676489 18676523 -121640242 - MIR SINE MIR -78 184 151 2402 82 7 0 chr10 18676523 18676827 -121639938 - AluSp SINE Alu -7 306 1 365 261 18 18 chr10 18676827 18676903 -121639862 - MIR SINE MIR -110 152 74 497 258 145 6 chr10 18678171 18678330 -121638435 - MIR SINE MIR 0 262 82 378 358 37 0 chr10 18678340 18678474 -121638291 - L2 LINE L2 0 3313 3175 2363 128 22 112 chr10 18678583 18679139 -121637626 + LTR10A LTR ERV1 1 506 -103 615 357 105 5 chr10 18679558 18679967 -121636798 + L3 LINE CR1 877 1326 -251 1189 178 92 43 chr10 18679968 18680119 -121636646 + MLT1A1 LTR MaLR 1 143 -222 2145 115 0 10 chr10 18680119 18680423 -121636342 + AluSg SINE Alu 1 301 -9 1189 178 92 43 chr10 18680423 18680619 -121636146 + MLT1A1 LTR MaLR 143 365 0 298 314 32 70 chr10 18680717 18680902 -121635863 - L2 LINE L2 -67 3205 3028 218 273 0 61 chr10 18680897 18680963 -121635802 + L2 LINE L2 3251 3312 -1 * 2033 130 14 0 chr10 18681173 18681465 -121635300 + AluSg SINE Alu 3 298 -12 291 282 19 19 chr10 18681553 18681656 -121635109 - L2 LINE L2 -2 3311 3209 845 246 46 54 chr10 18682375 18682635 -121634130 - MIR SINE MIR 0 262 5 2135 140 5 42 chr10 18682752 18683130 -121633635 - THE1B LTR MaLR 0 364 1 217 250 60 60 chr10 18683464 18683564 -121633201 - L2 LINE L2 -46 3267 3168 249 333 63 55 chr10 18683910 18684316 -121632449 - L2 LINE L2 -192 3080 2659 600 251 70 104 chr10 18684412 18684827 -121631938 + MLT1H1 LTR MaLR 68 443 -112 1754 161 44 3 chr10 18684827 18685125 -121631640 + AluJo SINE Alu 1 310 -2 600 251 70 104 chr10 18685125 18685229 -121631536 + MLT1H1 LTR MaLR 443 549 -6 387 129 20 10 chr10 18685296 18685397 -121631368 + (TCTA)n Simple_repeat Simple_repeat 3 104 0 1900 163 3 3 chr10 18685404 18685735 -121631030 - MLT2C1 LTR ERVL -66 331 1 1844 79 7 76 chr10 18686202 18686479 -121630286 + AluY SINE Alu 46 303 -8 271 309 138 8 chr10 18687939 18688062 -121628703 - MIR SINE MIR -3 259 121 240 35 0 0 chr10 18688439 18688468 -121628297 + (CA)n Simple_repeat Simple_repeat 2 30 0 695 99 0 0 chr10 18688935 18689048 -121627717 + FLAM_A SINE Alu 25 137 0 325 331 47 24 chr10 18689750 18689877 -121626888 + MIR SINE MIR 17 146 -62 3699 138 28 6 chr10 18690048 18690686 -121626079 + L1MA7 LINE L1 5639 6290 -1 24 0 0 0 chr10 18691461 18691485 -121625280 + AT_rich Low_complexity Low_complexity 1 24 0 244 269 65 32 chr10 18691593 18691686 -121625079 + L2 LINE L2 3172 3267 -5 217 226 19 19 chr10 18693233 18693286 -121623479 - L3 LINE CR1 -1 1576 1524 257 284 196 0 chr10 18693917 18694019 -121622746 - L2 LINE L2 -1 3271 3150 1823 171 10 13 chr10 18694894 18695192 -121621573 - AluSx SINE Alu -15 297 1 1957 108 33 49 chr10 18695634 18695939 -121620826 - AluSg SINE Alu -10 300 1 309 262 0 0 chr10 18697077 18697138 -121619627 + polypurine Low_complexity Low_complexity 1 61 0 601 201 17 11 chr10 18697138 18697317 -121619448 + GA-rich Low_complexity Low_complexity 1 180 0 670 276 155 6 chr10 18698883 18699398 -121617367 + L1MEc LINE L1 1731 2322 -4074 617 119 10 0 chr10 18699402 18699503 -121617262 + (GAA)n Simple_repeat Simple_repeat 1 102 0 2797 235 62 23 chr10 18699706 18700022 -121616743 + L1MEc LINE L1 3250 3552 -2663 306 0 0 0 chr10 18700022 18700056 -121616709 + (CA)n Simple_repeat Simple_repeat 2 35 0 2797 235 62 23 chr10 18700056 18700743 -121616022 + L1MEc LINE L1 3552 4292 -1923 2322 94 0 0 chr10 18701217 18701514 -121615251 - AluSg SINE Alu -13 297 1 474 291 24 18 chr10 18702119 18702284 -121614481 - MER63A DNA MER1_type -6 204 39 311 343 48 14 chr10 18703397 18703543 -121613222 - MIR SINE MIR -111 151 1 1229 236 4 19 chr10 18703878 18704149 -121612616 + Tigger7 DNA MER2_type 1 267 -2220 521 184 10 0 chr10 18704147 18704245 -121612520 + Tigger7 DNA MER2_type 2489 2587 0 * 952 239 124 43 chr10 18705131 18705478 -121611287 - LTR33 LTR ERVL -120 401 27 2482 119 8 3 chr10 18705649 18706011 -121610754 - THE1B LTR MaLR 0 364 1 638 260 28 163 chr10 18706523 18706619 -121610146 - L2 LINE L2 -4 3309 3202 2069 98 28 63 chr10 18706619 18706937 -121609828 + AluSp SINE Alu 2 308 -5 638 260 28 163 chr10 18706937 18707417 -121609348 - L2 LINE L2 -111 3202 2811 413 272 0 29 chr10 18707434 18707537 -121609228 + MER5A DNA MER1_type 10 109 -80 566 223 40 17 chr10 18707577 18707752 -121609013 - L1MB8 LINE L1 -1 6177 5999 * 2451 227 64 34 chr10 18707743 18708498 -121608267 - L1MEc LINE L1 -3166 3049 2271 2225 66 38 10 chr10 18708498 18708787 -121607978 - AluY SINE Alu -14 297 1 2451 227 64 34 chr10 18708787 18709204 -121607561 - L1MEc LINE L1 -3944 2271 1868 2088 293 62 6 chr10 18709307 18710006 -121606759 - L2 LINE L2 -508 2806 2069 2039 139 7 7 chr10 18710006 18710316 -121606449 + AluSx SINE Alu 1 310 -2 192 299 15 15 chr10 18710457 18710524 -121606241 + MER5A DNA MER1_type 122 188 -1 287 349 108 0 chr10 18710949 18711115 -121605650 + MIR SINE MIR 53 236 -26 413 139 0 38 chr10 18711215 18711294 -121605471 - MLT1F LTR MaLR -4 538 463 * 537 259 35 0 chr10 18711291 18711434 -121605331 - MLT1F LTR MaLR -369 173 26 3533 142 52 19 chr10 18711435 18712083 -121604682 + LTR51 LTR ERV1 1 670 -1 387 0 0 0 chr10 18712576 18712619 -121604146 + (CA)n Simple_repeat Simple_repeat 1 43 0 228 345 149 0 chr10 18712630 18712717 -121604048 + MIR3 SINE MIR 55 154 -54 1870 117 32 32 chr10 18712937 18713272 -121603493 + AluSx SINE Alu 2 336 0 958 133 13 13 chr10 18713455 18713606 -121603159 - FRAM SINE Alu -26 150 1 245 286 0 14 chr10 18714738 18714808 -121601957 + MLT1J2 LTR MaLR 263 331 -119 2144 159 45 23 chr10 18715466 18715906 -121600859 + LTR7 LTR ERV1 1 450 0 385 246 51 34 chr10 18715956 18716074 -121600691 - L2 LINE L2 0 3272 3153 2375 88 0 3 chr10 18717349 18717656 -121599109 + AluY SINE Alu 1 306 -5 207 244 0 0 chr10 18717771 18717849 -121598916 + GA-rich Low_complexity Low_complexity 1 78 0 547 89 89 0 chr10 18717931 18718021 -121598744 + MER4A LTR ERV1 1 98 -566 1570 128 174 76 chr10 18718021 18718389 -121598376 + MER4A LTR ERV1 261 664 0 2724 97 146 36 chr10 18718392 18718947 -121597818 + MER4A-int LTR ERV1 1 616 -5982 308 177 0 38 chr10 18718954 18719033 -121597732 + MER4A-int LTR ERV1 751 826 -5772 232 156 0 44 chr10 18719056 18719101 -121597664 + LTR49 LTR ERV1 271 313 -282 920 127 17 17 chr10 18719121 18719294 -121597471 + MER4A-int LTR ERV1 993 1165 -5433 336 254 0 0 chr10 18719294 18719412 -121597353 + (TG)n Simple_repeat Simple_repeat 1 118 0 593 103 43 141 chr10 18719412 18719651 -121597114 + MER4A-int LTR ERV1 566 749 -4266 3921 85 72 8 chr10 18719677 18720327 -121596438 + MER4A-int LTR ERV1 1804 2495 -4103 1286 163 75 0 chr10 18720327 18720566 -121596199 - LTR8 LTR ERV1 -434 257 1 1087 57 6 6 chr10 18720566 18720743 -121596022 + MER4A-int LTR ERV1 2737 2913 -3685 14313 101 66 17 chr10 18720762 18720798 -121595967 + MER4A-int LTR ERV1 3964 3997 -2601 1974 132 0 0 chr10 18720798 18721070 -121595695 - AluSq SINE Alu -41 272 1 14313 101 66 17 chr10 18721070 18723506 -121593259 + MER4A-int LTR ERV1 3997 6563 -35 215 31 31 0 chr10 18723506 18723538 -121593227 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 14313 101 66 17 chr10 18723538 18723571 -121593194 + MER4A-int LTR ERV1 6563 6593 -5 489 88 99 11 chr10 18723582 18723673 -121593092 + MER4A LTR ERV1 1 99 -565 533 132 6 170 chr10 18723724 18723883 -121592882 + MER4A LTR ERV1 372 504 -160 1617 128 75 17 chr10 18723883 18724259 -121592506 - LTR7 LTR ERV1 0 450 1 1070 137 6 0 chr10 18724259 18724422 -121592343 + MER4B LTR ERV1 445 608 -2 1549 167 8 0 chr10 18724425 18724677 -121592088 + AluJo SINE Alu 21 274 -38 285 29 0 0 chr10 18724680 18724714 -121592051 + (CA)n Simple_repeat Simple_repeat 1 34 0 1842 81 12 142 chr10 18724714 18725058 -121591707 + AluSg SINE Alu 1 299 -11 1837 155 59 34 chr10 18725111 18725499 -121591266 - MER48 LTR ERV1 0 398 1 2027 96 3 51 chr10 18725758 18726071 -121590694 - AluSp SINE Alu -15 298 1 313 217 76 11 chr10 18726304 18726396 -121590369 - MLT1I LTR MaLR -7 402 305 488 115 0 0 chr10 18726453 18726531 -121590234 + MLT2B2 LTR ERVL 5 82 -433 3132 133 41 87 chr10 18727138 18727862 -121588903 + LTR8 LTR ERV1 1 691 0 1021 166 6 0 chr10 18728340 18728497 -121588268 - FRAM SINE Alu -25 151 1 1625 157 32 11 chr10 18728506 18728787 -121587978 - AluJo SINE Alu -25 287 1 2333 91 3 0 chr10 18729366 18729662 -121587103 - AluSp SINE Alu -16 297 1 2284 64 7 7 chr10 18729749 18730066 -121586699 - AluY SINE Alu 0 311 1 405 304 32 45 chr10 18730245 18730465 -121586300 + MIR SINE MIR 32 248 -14 362 332 109 34 chr10 18730535 18730884 -121585881 - L2 LINE L2 -1 3312 2938 872 186 6 0 chr10 18730885 18731041 -121585724 + FRAM SINE Alu 1 157 -19 237 260 55 0 chr10 18731147 18731220 -121585545 - L2 LINE L2 -650 2664 2588 366 225 47 87 chr10 18731230 18731375 -121585390 - MLT1I LTR MaLR -7 416 303 3136 136 37 29 chr10 18731375 18731891 -121584874 + MLT2B1 LTR ERVL 1 520 0 366 225 47 87 chr10 18731891 18731927 -121584838 - MLT1I LTR MaLR -120 303 267 235 264 11 46 chr10 18732022 18732109 -121584656 - MLT1I LTR MaLR -284 125 42 310 320 0 0 chr10 18732162 18732259 -121584506 - L2 LINE L2 -756 2558 2462 1838 143 122 36 chr10 18733476 18733811 -121582954 + THE1B LTR MaLR 1 364 0 27 29 0 0 chr10 18734047 18734081 -121582684 + AT_rich Low_complexity Low_complexity 1 34 0 2163 105 28 0 chr10 18734107 18734392 -121582373 + AluSp SINE Alu 2 294 -19 217 332 109 43 chr10 18734700 18734911 -121581854 + L2 LINE L2 1063 1287 -2027 2423 84 0 3 chr10 18735731 18736040 -121580725 - AluSq SINE Alu -5 308 1 2370 100 0 0 chr10 18736550 18736850 -121579915 + AluSx SINE Alu 1 300 -12 305 309 67 47 chr10 18737683 18737832 -121578933 - L2 LINE L2 -29 3243 3092 1296 167 149 32 chr10 18738109 18738140 -121578625 - LTR37A LTR ERV1 -1 425 399 1893 160 7 10 chr10 18738140 18738446 -121578319 + AluJb SINE Alu 1 305 -7 1296 167 149 32 chr10 18738446 18738756 -121578009 - LTR37A LTR ERV1 -27 399 44 2066 125 10 0 chr10 18738756 18739045 -121577720 + AluSx SINE Alu 1 292 -20 14100 41 10 2 chr10 18739047 18741440 -121575325 + L1PA5 LINE L1 3748 6150 -4 848 100 0 0 chr10 18742013 18742123 -121574642 + HY1 scRNA scRNA 1 110 -2 2207 113 3 10 chr10 18742286 18742595 -121574170 + AluSx SINE Alu 1 307 -5 480 307 29 49 chr10 18742617 18742822 -121573943 - MIR SINE MIR -16 246 46 1334 221 28 36 chr10 18742848 18742937 -121573828 + LTR37A LTR ERV1 5 93 -333 1853 205 94 13 chr10 18742937 18743385 -121573380 + MER31A LTR ERV1 1 484 -1 1334 221 28 36 chr10 18743385 18743653 -121573112 + LTR37A LTR ERV1 93 359 -67 1197 189 25 8 chr10 18743653 18743891 -121572874 + AluJo SINE Alu 62 303 -9 317 153 0 14 chr10 18743893 18743965 -121572800 + LTR37A LTR ERV1 356 426 0 467 305 52 66 chr10 18744012 18744107 -121572658 + MIR SINE MIR 11 106 -156 2273 107 0 10 chr10 18744107 18744416 -121572349 + AluY SINE Alu 1 306 -5 467 305 52 66 chr10 18744416 18744533 -121572232 + MIR SINE MIR 106 220 -42 1627 235 80 45 chr10 18744586 18745123 -121571642 + MER34B LTR ERV1 6 561 -4 302 287 222 9 chr10 18745175 18745283 -121571482 - MER5A DNA MER1_type 0 189 59 2113 127 10 0 chr10 18745298 18745598 -121571167 - AluSp SINE Alu -10 303 1 2705 203 17 11 chr10 18745664 18746197 -121570568 + LTR31 LTR ERV1 69 604 -15 197 328 17 0 chr10 18746205 18746263 -121570502 - MER5A DNA MER1_type -122 67 9 2046 105 25 0 chr10 18746889 18747174 -121569591 + AluSx SINE Alu 1 292 -20 204 40 0 0 chr10 18747178 18747203 -121569562 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 36 0 0 0 chr10 18747243 18747279 -121569486 + AT_rich Low_complexity Low_complexity 1 36 0 2334 108 0 0 chr10 18748217 18748514 -121568251 - AluSx SINE Alu -15 297 1 244 338 14 0 chr10 18748691 18748765 -121568000 + Tigger8 DNA MER2_type 573 647 -19 722 113 0 182 chr10 18748854 18749013 -121567752 + AluJo SINE Alu 2 131 -171 242 256 0 64 chr10 18749014 18749059 -121567706 + AluJo SINE Alu 201 241 -61 1992 107 7 0 chr10 18749059 18749331 -121567434 + AluSp SINE Alu 34 307 -6 242 256 0 64 chr10 18749331 18749363 -121567402 + AluJo SINE Alu 241 273 -29 273 29 0 0 chr10 18750604 18750638 -121566127 + (TG)n Simple_repeat Simple_repeat 1 34 0 2138 84 15 0 chr10 18750641 18750914 -121565851 - AluSq SINE Alu -36 277 1 938 243 24 0 chr10 18752161 18752416 -121564349 + L1MA4 LINE L1 6039 6299 -1 220 276 0 0 chr10 18752678 18752736 -121564029 + T-rich Low_complexity Low_complexity 1 58 0 181 288 62 0 chr10 18753273 18753353 -121563412 - MIR SINE MIR -53 209 125 1087 324 112 18 chr10 18753370 18753926 -121562839 + L2 LINE L2 873 1480 -1834 1457 216 70 35 chr10 18753926 18754297 -121562468 - MLT1B LTR MaLR 0 390 7 211 320 181 26 chr10 18754303 18754612 -121562153 + L2 LINE L2 1476 1832 -1482 230 191 146 91 chr10 18754645 18754755 -121562010 + MER39 LTR ERV1 4 119 -588 * 789 222 128 49 chr10 18754738 18755168 -121561597 + LTR48B LTR ERV1 148 782 -5 194 217 22 0 chr10 18755174 18755220 -121561545 + L2 LINE L2 1881 1927 -1387 2497 82 0 0 chr10 18755234 18755538 -121561227 - AluSg SINE Alu -6 304 1 792 283 41 8 chr10 18756193 18756437 -121560328 + MER34 LTR ERV1 34 285 -257 317 177 16 0 chr10 18756495 18756557 -121560208 + LTR52-int LTR ERVL 693 755 -4588 2072 130 0 16 chr10 18756781 18757089 -121559676 - AluSx SINE Alu -8 304 2 402 78 0 0 chr10 18757090 18757141 -121559624 - L1M4 LINE L1 -577 5607 5557 285 241 28 74 chr10 18757286 18757394 -121559371 + LTR52-int LTR ERVL 503 605 -2951 2437 87 3 0 chr10 18757717 18758015 -121558750 - AluSx SINE Alu -13 299 1 1870 147 0 51 chr10 18758018 18758332 -121558433 - AluJo SINE Alu -12 300 3 2719 78 3 0 chr10 18758575 18758923 -121557842 - L1PA13 LINE L1 -26 6137 5789 2400 70 10 0 chr10 18758937 18759235 -121557530 - AluSp SINE Alu -12 301 1 2299 109 7 0 chr10 18759721 18760024 -121556741 + AluSx SINE Alu 1 305 -7 241 239 0 0 chr10 18761003 18761049 -121555716 + MIR SINE MIR 107 152 -110 279 258 161 0 chr10 18761220 18761344 -121555421 - MIR SINE MIR -32 230 87 1815 156 7 14 chr10 18761431 18761720 -121555045 - AluJb SINE Alu -25 287 1 212 314 20 0 chr10 18761734 18761785 -121554980 - L3b LINE CR1 -17 1566 1515 1889 126 0 0 chr10 18761822 18762084 -121554681 - AluSx SINE Alu -18 294 33 193 243 100 43 chr10 18762250 18762320 -121554445 + L2 LINE L2 3194 3267 -5 1451 225 38 67 chr10 18763326 18763781 -121552984 - L1MC5 LINE L1 -51 7910 7474 2423 69 0 3 chr10 18763781 18764085 -121552680 - AluY SINE Alu -8 303 1 1451 225 38 67 chr10 18764085 18764212 -121552553 - L1MC5 LINE L1 -487 7474 7345 26 30 0 0 chr10 18764237 18764270 -121552495 + AT_rich Low_complexity Low_complexity 1 33 0 1448 218 62 107 chr10 18764318 18765026 -121551739 - L1MC5 LINE L1 -632 7329 6658 2146 129 0 3 chr10 18765026 18765328 -121551437 - AluSx SINE Alu -11 301 1 1448 218 62 107 chr10 18765328 18765419 -121551346 - L1MC5 LINE L1 -1303 6658 6564 895 136 0 0 chr10 18765554 18765672 -121551093 + FLAM_C SINE Alu 1 118 -15 554 282 69 69 chr10 18766044 18766202 -121550563 - HAL1b LINE L1 -683 665 508 2267 97 3 3 chr10 18766202 18766513 -121550252 - AluSq SINE Alu -2 311 1 554 282 69 69 chr10 18766513 18766804 -121549961 - HAL1b LINE L1 -839 509 216 882 145 0 0 chr10 18766941 18767072 -121549693 - FLAM_C SINE Alu -12 131 1 204 342 13 7 chr10 18767082 18767231 -121549534 + T-rich Low_complexity Low_complexity 4 153 0 1598 188 0 34 chr10 18767281 18767579 -121549186 - AluJo SINE Alu -4 308 21 37 0 0 0 chr10 18767818 18767855 -121548910 + GC_rich Low_complexity Low_complexity 1 37 0 360 249 150 98 chr10 18767884 18767907 -121548858 + L1M2 LINE L1 657 677 -6172 198 0 0 0 chr10 18767907 18767929 -121548836 + (CAG)n Simple_repeat Simple_repeat 3 24 0 360 249 150 98 chr10 18767929 18768042 -121548723 + L1M2 LINE L1 677 783 -6066 207 114 0 0 chr10 18768042 18768077 -121548688 + (CCG)n Simple_repeat Simple_repeat 2 36 0 360 249 150 98 chr10 18768077 18768345 -121548420 + L1M2 LINE L1 783 1083 -5766 719 239 27 63 chr10 18768673 18768895 -121547870 + MER58A DNA MER1_type 2 215 -9 530 274 138 19 chr10 18768905 18769238 -121547527 + MER57A LTR ERV1 9 403 0 1369 217 11 49 chr10 18769239 18769607 -121547158 + MLT1A1 LTR MaLR 1 354 -11 248 188 0 47 chr10 18769803 18769867 -121546898 + L1MC5 LINE L1 7856 7916 -45 180 109 43 22 chr10 18771533 18771579 -121545186 + (TA)n Simple_repeat Simple_repeat 2 48 0 487 126 52 29 chr10 18771623 18771797 -121544968 + (TA)n Simple_repeat Simple_repeat 1 178 0 287 144 61 15 chr10 18771839 18771971 -121544794 + (TA)n Simple_repeat Simple_repeat 1 138 0 186 200 13 27 chr10 18772078 18772153 -121544612 + (TA)n Simple_repeat Simple_repeat 1 74 0 2850 16 0 0 chr10 18772463 18772773 -121543992 - AluYa5 SINE Alu -1 310 1 1725 166 0 34 chr10 18772910 18773226 -121543539 + AluJo SINE Alu 1 306 0 1568 169 19 51 chr10 18773563 18773877 -121542888 + AluJo SINE Alu 5 308 -4 2110 128 0 7 chr10 18774978 18775274 -121541491 - AluSx SINE Alu -18 294 1 2272 93 3 0 chr10 18775301 18775592 -121541173 - AluSg SINE Alu -18 292 1 226 284 53 0 chr10 18775680 18775775 -121540990 + L1M4 LINE L1 3804 3903 -2243 835 176 8 0 chr10 18775825 18775956 -121540809 + FLAM_A SINE Alu 1 132 -1 663 301 101 39 chr10 18776691 18777076 -121539689 + L2 LINE L2 2905 3313 0 364 309 101 14 chr10 18777455 18777594 -121539171 + MIR SINE MIR 21 171 -91 409 276 25 111 chr10 18777597 18777624 -121539141 + L2 LINE L2 2380 2408 -906 3628 119 33 4 chr10 18777624 18778135 -121538630 + MER1A DNA MER1_type 1 526 -1 409 276 25 111 chr10 18778135 18778469 -121538296 + L2 LINE L2 2408 2710 -604 337 246 24 157 chr10 18778777 18779025 -121537740 + L2 LINE L2 2839 3053 -219 289 202 138 32 chr10 18779639 18779760 -121537005 + MIR3 SINE MIR 15 154 -62 2007 117 0 17 chr10 18780053 18780343 -121536422 + AluSx SINE Alu 19 303 -9 21 36 0 0 chr10 18780437 18780465 -121536300 + AT_rich Low_complexity Low_complexity 1 28 0 28 0 0 0 chr10 18781056 18781084 -121535681 + AT_rich Low_complexity Low_complexity 1 28 0 2352 79 26 0 chr10 18781105 18781408 -121535357 - AluY SINE Alu 0 311 1 231 229 92 76 chr10 18782186 18782317 -121534448 - MIR3 SINE MIR -52 156 24 207 256 0 33 chr10 18783050 18783140 -121533625 + T-rich Low_complexity Low_complexity 4 90 0 349 267 30 10 chr10 18783194 18783295 -121533470 + L2 LINE L2 3211 3313 0 2732 123 43 54 chr10 18783385 18783627 -121533138 + MER39B LTR ERV1 1 244 -409 1429 201 60 7 chr10 18783627 18783911 -121532854 + AluJo SINE Alu 1 299 -13 2732 123 43 54 chr10 18783911 18783956 -121532809 + MER39B LTR ERV1 244 288 -365 1993 138 39 30 chr10 18783956 18784317 -121532448 + THE1B LTR MaLR 1 364 0 2732 123 43 54 chr10 18784317 18784565 -121532200 + MER39B LTR ERV1 288 531 -122 1780 68 5 0 chr10 18784592 18784811 -121531954 + AluY SINE Alu 1 220 -91 23 0 0 0 chr10 18784949 18784972 -121531793 + AT_rich Low_complexity Low_complexity 1 23 0 489 140 43 0 chr10 18784977 18785070 -121531695 + LTR49 LTR ERV1 494 590 -5 782 185 0 0 chr10 18785309 18785439 -121531326 + FLAM_C SINE Alu 1 130 -3 1898 147 31 10 chr10 18786385 18786678 -121530087 + AluJo SINE Alu 14 312 0 1125 208 64 71 chr10 18786682 18787130 -121529635 + MER66A LTR ERV1 97 478 0 289 284 194 26 chr10 18787203 18787358 -121529407 + MIR SINE MIR 81 261 -1 1786 178 65 11 chr10 18787429 18787784 -121528981 + THE1C LTR MaLR 1 374 -1 2105 105 0 68 chr10 18789213 18789536 -121527229 - AluSx SINE Alu -11 301 1 265 389 41 8 chr10 18789601 18789966 -121526799 - L1ME LINE L1 -288 5882 5506 234 0 0 0 chr10 18790116 18790142 -121526623 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 395 295 135 25 chr10 18790336 18790855 -121525910 - L1ME LINE L1 -1053 5093 4518 457 294 165 29 chr10 18790932 18791272 -121525493 - L1ME LINE L1 -1714 4432 4047 619 256 0 12 chr10 18791296 18791456 -121525309 + MLT1J LTR MaLR 29 186 -325 375 307 42 18 chr10 18791598 18791764 -121525001 + MLT1J LTR MaLR 234 403 -108 375 275 110 28 chr10 18791803 18792021 -121524744 - HAL1 LINE L1 -873 1634 1399 731 188 0 54 chr10 18792680 18792829 -121523936 + FLAM_C SINE Alu 1 141 -2 2269 116 0 0 chr10 18794654 18794948 -121521817 + AluSq SINE Alu 1 294 -19 22 0 0 0 chr10 18795002 18795024 -121521741 + AT_rich Low_complexity Low_complexity 1 22 0 1346 260 86 19 chr10 18795030 18795291 -121521474 + L1ME3A LINE L1 5590 5832 -338 315 0 0 0 chr10 18795291 18795326 -121521439 + (CA)n Simple_repeat Simple_repeat 2 36 0 1346 260 86 19 chr10 18795326 18795599 -121521166 + L1ME3A LINE L1 5832 6160 -10 377 285 69 15 chr10 18795900 18796030 -121520735 + MIR SINE MIR 52 188 -74 548 235 29 142 chr10 18796381 18796461 -121520304 - MIR SINE MIR -6 256 169 2342 120 42 26 chr10 18796461 18796887 -121519878 - L1PB4 LINE L1 -13 6143 5711 548 235 29 142 chr10 18796887 18797087 -121519678 - MIR SINE MIR -93 169 8 255 31 0 0 chr10 18797113 18797145 -121519620 + (TG)n Simple_repeat Simple_repeat 2 33 0 1918 163 0 3 chr10 18797287 18797588 -121519177 + AluSx SINE Alu 1 300 -12 417 289 73 70 chr10 18798728 18799084 -121517681 - L1ME LINE L1 -2985 3161 2805 1868 117 10 33 chr10 18799111 18799445 -121517320 + AluY SINE Alu 1 311 0 1806 144 54 4 chr10 18799930 18800207 -121516558 + AluSx SINE Alu 1 291 -21 26 30 0 0 chr10 18800207 18800240 -121516525 + AT_rich Low_complexity Low_complexity 1 33 0 3442 74 18 10 chr10 18800514 18801029 -121515736 - L1PA11 LINE L1 -348 5826 5308 1913 125 38 3 chr10 18801030 18801317 -121515448 - AluSx SINE Alu -15 297 1 197 395 53 0 chr10 18801336 18801450 -121515315 - L2 LINE L2 -508 2806 2687 247 238 16 0 chr10 18801696 18801759 -121515006 + (TA)n Simple_repeat Simple_repeat 1 64 0 2201 98 40 0 chr10 18801890 18802186 -121514579 + AluSg SINE Alu 1 308 -2 222 328 66 59 chr10 18802808 18803263 -121513502 - L2 LINE L2 -823 2491 2034 208 259 52 0 chr10 18805579 18805637 -121511128 + L2 LINE L2 3148 3208 -64 2264 102 0 0 chr10 18806421 18806716 -121510049 + AluSg SINE Alu 1 295 -15 1586 208 35 37 chr10 18806901 18806979 -121509786 + L1M4 LINE L1 4885 4962 -1216 1834 116 25 7 chr10 18806979 18807283 -121509482 + AluSx SINE Alu 1 309 0 1586 208 35 37 chr10 18807283 18807795 -121508970 + L1M4 LINE L1 4962 5469 -709 827 453 36 22 chr10 18808082 18808360 -121508405 + AluSx SINE Alu 1 282 -30 6348 40 2 0 chr10 18808372 18809168 -121507597 - L1PA3 LINE L1 -2 6153 5356 * 7573 31 0 4 chr10 18809155 18810134 -121506631 + L1PA3 LINE L1 4386 5360 -786 244 342 101 9 chr10 18810192 18810420 -121506345 + L2 LINE L2 2399 2647 -667 960 190 13 0 chr10 18810461 18810619 -121506146 - AluJb SINE Alu -26 286 127 1761 103 0 9 chr10 18810644 18810876 -121505889 + AluSg/x SINE Alu 68 297 -15 476 313 27 14 chr10 18810925 18811072 -121505693 + L2 LINE L2 3116 3264 -8 265 217 0 43 chr10 18811149 18811218 -121505547 - MER96B DNA MER1_type? -31 386 321 571 122 0 0 chr10 18811221 18811311 -121505454 + MLT2B1 LTR ERVL 5 94 -421 657 150 18 9 chr10 18811318 18811431 -121505334 - AluJb SINE Alu -25 287 174 1578 185 76 47 chr10 18811444 18811850 -121504915 + MLT2B1 LTR ERVL 100 517 -3 252 154 0 0 chr10 18811850 18811898 -121504867 - MER96B DNA MER1_type? -101 316 269 949 148 6 60 chr10 18811898 18812080 -121504685 + AluJo SINE Alu 122 293 -19 819 137 4 124 chr10 18812087 18812252 -121504513 - MER96B DNA MER1_type? -164 253 123 1935 156 0 3 chr10 18812252 18812540 -121504225 + AluJb SINE Alu 1 287 -25 819 137 4 124 chr10 18812540 18812608 -121504157 - MER96B DNA MER1_type? -294 123 48 596 243 75 45 chr10 18812644 18812833 -121503932 + MER34B LTR ERV1 270 471 -94 1880 157 10 0 chr10 18812833 18813132 -121503633 - AluSg SINE Alu -8 302 1 596 243 75 45 chr10 18813132 18813210 -121503555 + MER34B LTR ERV1 471 545 -20 467 293 52 65 chr10 18813521 18813665 -121503100 - MIR SINE MIR -13 249 108 780 144 0 182 chr10 18813665 18813901 -121502864 + 7SK RNA RNA 1 193 0 467 293 52 65 chr10 18813901 18813985 -121502780 - MIR SINE MIR -154 108 24 187 170 19 19 chr10 18814027 18814080 -121502685 + CT-rich Low_complexity Low_complexity 3 55 0 479 178 149 0 chr10 18814093 18814200 -121502565 - L2 LINE L2 -1 3312 3190 913 219 28 36 chr10 18814203 18814454 -121502311 + LTR8 LTR ERV1 1 249 -442 878 244 23 99 chr10 18814675 18815150 -121501615 + L1ME2 LINE L1 5649 6087 -77 239 278 68 98 chr10 18815221 18815426 -121501339 + MIR SINE MIR 6 204 -58 296 325 0 33 chr10 18815801 18815921 -121500844 - L1ME LINE L1 -506 5656 5541 233 324 74 6 chr10 18815944 18816120 -121500645 - L1ME LINE L1 -2337 5471 5284 243 292 64 27 chr10 18816290 18816509 -121500256 - L1ME LINE L1 -1037 5109 4883 2043 150 0 0 chr10 18817510 18817810 -121498955 - AluJb SINE Alu -12 300 1 273 212 76 0 chr10 18819103 18819169 -121497596 + Tigger7 DNA MER2_type 2421 2491 0 234 222 19 0 chr10 18821030 18821084 -121495681 + L1ME3A LINE L1 6095 6149 -21 1656 159 18 25 chr10 18821113 18821389 -121495376 + AluJo SINE Alu 1 274 -38 674 146 28 28 chr10 18821392 18821570 -121495195 + GA-rich Low_complexity Low_complexity 1 178 0 201 138 0 0 chr10 18821570 18821599 -121495166 + (GGAA)n Simple_repeat Simple_repeat 1 29 0 219 139 0 0 chr10 18822507 18822543 -121494222 + (CA)n Simple_repeat Simple_repeat 2 37 0 21 36 0 0 chr10 18822613 18822641 -121494124 + AT_rich Low_complexity Low_complexity 1 28 0 1995 124 41 0 chr10 18822685 18822975 -121493790 - AluSx SINE Alu -9 303 2 22 35 0 0 chr10 18823084 18823113 -121493652 + AT_rich Low_complexity Low_complexity 1 29 0 300 27 0 0 chr10 18824000 18824037 -121492728 + (CA)n Simple_repeat Simple_repeat 2 38 0 220 208 42 28 chr10 18824066 18824138 -121492627 + (TATG)n Simple_repeat Simple_repeat 3 75 0 402 121 96 0 chr10 18824145 18824302 -121492463 + (TA)n Simple_repeat Simple_repeat 1 172 0 217 196 52 12 chr10 18824333 18824506 -121492259 + (TA)n Simple_repeat Simple_repeat 1 180 0 244 171 26 53 chr10 18824506 18824582 -121492183 + (TTATA)n Simple_repeat Simple_repeat 5 78 0 185 107 54 18 chr10 18824601 18824657 -121492108 + (TA)n Simple_repeat Simple_repeat 1 58 0 208 121 0 0 chr10 18825921 18825954 -121490811 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 1973 125 0 22 chr10 18826601 18826913 -121489852 + AluSg1 SINE Alu 5 309 0 1665 193 0 11 chr10 18826915 18827200 -121489565 + AluJo SINE Alu 1 282 -30 22 70 0 0 chr10 18827200 18827243 -121489522 + AT_rich Low_complexity Low_complexity 1 43 0 595 210 8 0 chr10 18828008 18828127 -121488638 + LTR31 LTR ERV1 499 618 -1 330 203 0 14 chr10 18828182 18828256 -121488509 - MER63 DNA MER1_type -310 751 679 639 226 221 0 chr10 18828472 18828662 -121488103 - MIR SINE MIR -22 240 9 330 282 18 9 chr10 18830161 18830271 -121486494 - L2 LINE L2 -8 3305 3195 6499 86 49 4 chr10 18831078 18831758 -121485007 - L1PA8 LINE L1 -2 6170 5464 1842 126 23 4 chr10 18831758 18832021 -121484744 - AluSx SINE Alu -12 300 33 6499 86 49 4 chr10 18832021 18832351 -121484414 - L1PA8 LINE L1 -708 5464 5150 3851 131 10 2 chr10 18832351 18832963 -121483802 + L1P LINE L1 4305 4921 -1225 378 0 0 0 chr10 18832963 18833005 -121483760 + (TA)n Simple_repeat Simple_repeat 2 43 0 2265 115 7 0 chr10 18833105 18833409 -121483356 - AluSx SINE Alu -6 306 1 1636 285 161 28 chr10 18833412 18834256 -121482509 + L2 LINE L2 1941 3008 -264 2270 160 70 5 chr10 18834256 18834656 -121482109 - MSTB LTR MaLR 0 426 1 1636 285 161 28 chr10 18834656 18834961 -121481804 + L2 LINE L2 3008 3271 -1 1495 154 62 19 chr10 18835390 18835649 -121481116 - AluJo SINE Alu -42 270 1 291 328 8 8 chr10 18835782 18835901 -121480864 - MIR SINE MIR -125 137 19 2477 90 0 0 chr10 18836012 18836323 -121480442 + AluSq SINE Alu 1 311 -2 195 358 8 16 chr10 18836327 18836450 -121480315 - L3 LINE CR1 -1339 238 117 1939 156 6 16 chr10 18836551 18836866 -121479899 + AluJb SINE Alu 1 312 0 2394 50 4 0 chr10 18837433 18837711 -121479054 + AluY SINE Alu 1 279 -32 187 54 54 0 chr10 18837714 18837751 -121479014 + A-rich Low_complexity Low_complexity 2 40 0 891 278 101 42 chr10 18837941 18838048 -121478717 + LTR16A LTR ERVL 51 150 -300 1687 167 123 23 chr10 18838048 18838437 -121478328 - MSTA LTR MaLR 0 428 1 891 278 101 42 chr10 18838437 18838707 -121478058 + LTR16A LTR ERVL 150 450 0 1594 173 20 34 chr10 18838873 18839168 -121477597 - AluJb SINE Alu -21 291 1 26 30 0 0 chr10 18839314 18839347 -121477418 + AT_rich Low_complexity Low_complexity 1 33 0 243 232 113 82 chr10 18840638 18840832 -121475933 + L2 LINE L2 3114 3313 0 2159 120 3 3 chr10 18841404 18841705 -121475060 - AluSx SINE Alu -11 301 1 205 231 19 0 chr10 18842026 18842078 -121474687 + (TA)n Simple_repeat Simple_repeat 1 53 0 249 217 0 0 chr10 18842110 18842156 -121474609 - LTR16C LTR ERVL 0 491 446 1790 172 14 3 chr10 18842164 18842461 -121474304 + AluSx SINE Alu 1 300 -12 729 118 28 28 chr10 18842464 18842642 -121474123 + GA-rich Low_complexity Low_complexity 3 180 0 856 234 85 55 chr10 18842649 18842717 -121474048 - LTR16C LTR ERVL -48 443 379 2715 184 28 4 chr10 18842717 18843223 -121473542 + LTR53 LTR ERVL 2 519 0 856 234 85 55 chr10 18843223 18843517 -121473248 - LTR16C LTR ERVL -112 379 70 2150 110 3 10 chr10 18843698 18843997 -121472768 + AluSx SINE Alu 1 297 -15 575 248 124 0 chr10 18844110 18844263 -121472502 - MER5A DNA MER1_type -5 184 13 201 327 62 19 chr10 18845444 18845606 -121471159 - L2 LINE L2 -222 3050 2882 414 171 0 0 chr10 18846179 18846255 -121470510 - Alu SINE Alu -1 311 236 1347 164 0 9 chr10 18846449 18846663 -121470102 - AluJo SINE Alu -100 212 1 5675 121 25 5 chr10 18846780 18847742 -121469023 - L1PB3 LINE L1 0 6154 5175 243 230 40 105 chr10 18847798 18847950 -121468815 + MLT1J2 LTR MaLR 1 142 -308 415 258 33 17 chr10 18848440 18848560 -121468205 + MIR SINE MIR 19 140 -122 717 283 141 39 chr10 18848576 18849211 -121467554 - L2 LINE L2 -4 3309 2605 3021 101 43 0 chr10 18849497 18849775 -121466990 + MER57B LTR ERV1 1 304 -130 210 71 0 0 chr10 18849775 18849803 -121466962 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 3021 101 43 0 chr10 18849803 18849940 -121466825 + MER57B LTR ERV1 304 434 0 281 278 83 9 chr10 18850211 18850319 -121466446 + L1ME LINE L1 5387 5502 -619 180 0 0 0 chr10 18851554 18851574 -121465191 + (CA)n Simple_repeat Simple_repeat 2 21 0 493 270 68 0 chr10 18852237 18852400 -121464365 + MIR SINE MIR 79 252 -10 1587 180 37 19 chr10 18852713 18853035 -121463730 + MER65C LTR ERV1 1 328 -133 1966 130 69 67 chr10 18853035 18853191 -121463574 + THE1B LTR MaLR 3 157 -207 3765 36 0 0 chr10 18853191 18853638 -121463127 - L1PA4 LINE L1 0 6155 5709 1966 130 69 67 chr10 18853638 18853842 -121462923 + THE1B LTR MaLR 157 364 0 626 168 17 8 chr10 18853842 18853960 -121462805 + MER65C LTR ERV1 321 439 -22 1111 142 14 71 chr10 18853993 18854204 -121462561 - AluJo SINE Alu -27 285 87 1167 170 66 0 chr10 18904205 18904417 -121412348 + THE1C LTR MaLR 149 374 -1 2102 105 0 68 chr10 18905692 18906015 -121410750 - AluSx SINE Alu -11 301 1 404 327 104 21 chr10 18906080 18906572 -121410193 - L1ME3A LINE L1 -288 5882 5347 234 0 0 0 chr10 18906595 18906621 -121410144 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 640 289 155 34 chr10 18906815 18907725 -121409040 - L1ME3A LINE L1 -1053 5093 4074 697 250 0 12 chr10 18907775 18907935 -121408830 + MLT1J LTR MaLR 29 186 -325 426 311 72 17 chr10 18908063 18908243 -121408522 + MLT1J LTR MaLR 214 403 -108 459 265 86 86 chr10 18908282 18908595 -121408170 - HAL1 LINE L1 -873 1634 1322 789 189 0 54 chr10 18909160 18909308 -121407457 + FLAM_C SINE Alu 2 141 -2 1363 223 59 56 chr10 18911005 18911431 -121405334 + MER110A LTR ERV1 42 468 0 219 188 43 29 chr10 18911740 18911809 -121404956 + L2 LINE L2 3122 3191 -122 2368 182 40 118 chr10 18911821 18912574 -121404191 - LTR8A LTR ERV1 0 727 34 471 196 149 0 chr10 18912593 18912700 -121404065 + L2 LINE L2 3190 3312 -1 496 317 48 59 chr10 18912850 18912980 -121403785 + L2 LINE L2 2402 2532 -782 2103 115 0 10 chr10 18912980 18913276 -121403489 + AluSx SINE Alu 11 303 -9 496 317 48 59 chr10 18913276 18913435 -121403330 + L2 LINE L2 2532 2688 -626 1090 106 0 0 chr10 18913459 18913601 -121403164 + AluSg/x SINE Alu 154 295 -17 725 244 118 61 chr10 18913605 18914136 -121402629 + L2 LINE L2 2711 3297 -16 1997 108 22 0 chr10 18914136 18914404 -121402361 - AluSq SINE Alu -12 301 28 725 244 118 61 chr10 18914404 18914423 -121402342 + L2 LINE L2 3297 3313 0 202 263 162 10 chr10 18914716 18914815 -121401950 - L2 LINE L2 -7 3306 3193 466 210 210 0 chr10 18915093 18915217 -121401548 + MLT1A1 LTR MaLR 1 150 -215 2386 82 0 7 chr10 18915279 18915584 -121401181 + AluSc SINE Alu 1 303 -6 1985 122 0 0 chr10 18915586 18915873 -121400892 + AluSx SINE Alu 20 306 0 1664 163 10 42 chr10 18916306 18916612 -121400153 + AluSx SINE Alu 1 296 -16 432 338 76 19 chr10 18916724 18916934 -121399831 - MLT1J2 LTR MaLR -130 320 99 266 167 0 0 chr10 18917082 18917130 -121399635 + Alu SINE Alu 249 296 -5 331 266 42 56 chr10 18917130 18917273 -121399492 - L3 LINE CR1 -43 1534 1394 752 297 92 44 chr10 18917289 18917808 -121398957 - MLT1H LTR MaLR 0 549 6 2183 82 0 37 chr10 18917822 18918139 -121398626 + AluSx SINE Alu 1 306 0 787 185 15 0 chr10 18918229 18918364 -121398401 - MSTC LTR MaLR 0 428 292 1488 153 45 45 chr10 18918364 18918442 -121398323 - L1MA4 LINE L1 -5 6166 6090 4404 101 20 23 chr10 18918442 18918502 -121398263 - LTR43 LTR ERV1 -2 600 541 2219 109 13 0 chr10 18918502 18918806 -121397959 + AluSg SINE Alu 1 308 -2 4404 101 20 23 chr10 18918806 18919347 -121397418 - LTR43 LTR ERV1 -61 541 1 2117 123 0 0 chr10 18919353 18919646 -121397119 - AluSx SINE Alu -19 293 1 1488 153 45 45 chr10 18919646 18919934 -121396831 - L1MA4 LINE L1 -85 6086 5770 2085 118 6 13 chr10 18919934 18920248 -121396517 - AluSx SINE Alu 0 312 1 269 319 12 31 chr10 18920303 18920466 -121396299 + C-rich Low_complexity Low_complexity 6 165 0 1413 219 69 99 chr10 18920574 18920670 -121396095 + L1MC5 LINE L1 6554 6651 -1310 2251 116 0 3 chr10 18920670 18920971 -121395794 + AluSx SINE Alu 1 300 -12 1413 219 69 99 chr10 18920971 18921679 -121395086 + L1MC5 LINE L1 6651 7329 -632 26 30 0 0 chr10 18921727 18921760 -121395005 + AT_rich Low_complexity Low_complexity 1 33 0 400 214 40 24 chr10 18921785 18921911 -121394854 + L1MC5 LINE L1 7345 7472 -489 325 0 0 0 chr10 18921911 18921946 -121394819 + U2 snRNA snRNA 1 35 -153 2509 59 0 7 chr10 18921960 18922267 -121394498 + AluY SINE Alu 1 305 -6 1076 226 37 66 chr10 18922270 18922726 -121394039 + L1MC5 LINE L1 7468 7910 -51 193 243 100 43 chr10 18923730 18923800 -121392965 - L2 LINE L2 -5 3267 3194 1866 130 0 0 chr10 18923966 18924228 -121392537 + AluSx SINE Alu 33 294 -18 212 314 20 0 chr10 18924265 18924316 -121392449 + L3b LINE CR1 1515 1566 -17 1815 156 7 14 chr10 18924330 18924619 -121392146 + AluJb SINE Alu 1 287 -25 279 258 161 0 chr10 18924706 18924830 -121391935 + MIR SINE MIR 87 230 -32 241 239 0 0 chr10 18925001 18925047 -121391718 - MIR SINE MIR -110 152 107 2299 109 7 0 chr10 18926027 18926330 -121390435 - AluSx SINE Alu -7 305 1 2409 70 10 0 chr10 18926816 18927115 -121389650 + AluSp SINE Alu 1 302 -11 2719 78 3 0 chr10 18927129 18927477 -121389288 + L1PA13 LINE L1 5789 6137 -26 1870 147 0 51 chr10 18927720 18928034 -121388731 + AluJo SINE Alu 3 300 -12 2312 116 0 0 chr10 18928037 18928339 -121388426 + AluSx SINE Alu 1 302 -10 290 157 0 0 chr10 18928611 18928662 -121388103 - Alu SINE Alu 0 300 250 2082 109 0 0 chr10 18928762 18929068 -121387697 + AluSx SINE Alu 17 322 0 1663 202 154 14 chr10 18929692 18930127 -121386638 - LTR54B LTR ERV1 -2 496 1 925 101 0 0 chr10 18931536 18931655 -121385110 + AluSg SINE Alu 1 119 -191 355 326 116 0 chr10 18931959 18932097 -121384668 - MLT1K LTR MaLR -375 213 60 460 243 19 9 chr10 18932315 18932422 -121384343 - MER5A DNA MER1_type 0 189 82 241 319 0 0 chr10 18932514 18932586 -121384179 + L3 LINE CR1 1244 1315 -262 1578 128 35 86 chr10 18932587 18932638 -121384127 + MSTC LTR MaLR 1 53 -375 2244 117 0 0 chr10 18932638 18932937 -121383828 - AluSx SINE Alu -13 299 1 1578 128 35 86 chr10 18932937 18933198 -121383567 + MSTC LTR MaLR 53 297 -131 927 170 0 7 chr10 18934249 18934396 -121382369 - FRAM SINE Alu -30 146 1 1790 150 46 29 chr10 18934722 18935029 -121381736 + AluSx SINE Alu 1 312 0 216 0 0 0 chr10 18935468 18935492 -121381273 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 697 250 78 96 chr10 18935773 18936053 -121380712 + MLT1H LTR MaLR 3 286 -263 1696 147 55 20 chr10 18936053 18936345 -121380420 + AluJo SINE Alu 10 311 -1 697 250 78 96 chr10 18936345 18936504 -121380261 + MLT1H LTR MaLR 286 446 -103 2159 146 48 31 chr10 18936676 18937032 -121379733 - THE1B LTR MaLR -2 362 1 2223 96 3 3 chr10 18937571 18937863 -121378902 + AluSg1 SINE Alu 1 292 -17 21 71 0 0 chr10 18938406 18938448 -121378317 + AT_rich Low_complexity Low_complexity 1 42 0 447 293 52 65 chr10 18939408 18939492 -121377273 + MIR SINE MIR 24 108 -154 862 144 0 182 chr10 18939492 18939728 -121377037 - 7SK RNA RNA 0 193 1 447 293 52 65 chr10 18939728 18939872 -121376893 + MIR SINE MIR 108 249 -13 710 243 75 45 chr10 18940183 18940261 -121376504 - MER34B LTR ERV1 -20 545 471 1868 157 10 0 chr10 18940261 18940560 -121376205 + AluSg SINE Alu 1 302 -8 710 243 75 45 chr10 18940560 18940749 -121376016 - MER34B LTR ERV1 -94 471 270 923 133 4 124 chr10 18940785 18940853 -121375912 + MER96B DNA MER1_type? 48 123 -294 1917 156 0 3 chr10 18940853 18941141 -121375624 - AluJb SINE Alu -25 287 1 923 133 4 124 chr10 18941141 18941306 -121375459 + MER96B DNA MER1_type? 123 253 -164 941 148 6 60 chr10 18941313 18941495 -121375270 - AluJo SINE Alu -19 293 122 277 154 0 0 chr10 18941495 18941543 -121375222 + MER96B DNA MER1_type? 269 316 -101 1748 185 76 47 chr10 18941543 18941949 -121374816 - MLT2B1 LTR ERVL -3 517 100 701 150 18 9 chr10 18941962 18942075 -121374690 + AluJb SINE Alu 174 287 -25 595 133 0 0 chr10 18942082 18942172 -121374593 - MLT2B1 LTR ERVL -421 94 5 292 217 0 43 chr10 18942175 18942244 -121374521 + MER96B DNA MER1_type? 321 386 -31 516 304 20 14 chr10 18942322 18942470 -121374295 - L2 LINE L2 -8 3264 3116 1751 119 16 8 chr10 18942519 18942771 -121373994 - AluSg SINE Alu -15 295 42 944 190 13 0 chr10 18942776 18942934 -121373831 + AluJb SINE Alu 127 286 -26 249 342 101 9 chr10 18942975 18943203 -121373562 - L2 LINE L2 -667 2647 2399 8114 31 0 4 chr10 18943261 18944240 -121372525 - L1PA3 LINE L1 -786 5360 4386 7212 30 2 0 chr10 18944240 18945023 -121371742 + L1PA3 LINE L1 5356 6153 -2 1821 132 3 24 chr10 18945035 18945323 -121371442 - AluSx SINE Alu -30 282 1 2240 109 3 0 chr10 18946596 18946899 -121369866 + AluSg SINE Alu 1 304 -6 1622 185 0 34 chr10 18947482 18947780 -121368985 + AluJo SINE Alu 21 308 -4 204 342 13 7 chr10 18947830 18947979 -121368786 + A-rich Low_complexity Low_complexity 4 153 0 882 145 0 0 chr10 18947989 18948120 -121368645 + FLAM_C SINE Alu 1 131 -12 592 280 69 69 chr10 18948257 18948548 -121368217 + HAL1b LINE L1 216 509 -839 2275 96 3 3 chr10 18948548 18948860 -121367905 + AluSq SINE Alu 1 312 -1 592 280 69 69 chr10 18948860 18949018 -121367747 + HAL1b LINE L1 508 665 -683 293 176 0 0 chr10 18949390 18949441 -121367324 - FLAM_A SINE Alu -16 117 67 3531 74 7 2 chr10 18949633 18950081 -121366684 - L1PA13 LINE L1 -4 6159 5710 870 160 0 0 chr10 18950131 18950256 -121366509 + FLAM_A SINE Alu 1 125 -8 719 268 55 70 chr10 18950908 18951097 -121365668 + L2 LINE L2 7 190 -3124 2012 150 7 3 chr10 18951097 18951390 -121365375 + AluSx SINE Alu 1 294 -18 719 268 55 70 chr10 18951390 18951528 -121365237 + L2 LINE L2 190 329 -2985 1540 256 40 6 chr10 18951794 18952326 -121364439 + L1ME2 LINE L1 2797 3346 -2800 656 208 61 122 chr10 18952340 18952490 -121364275 + L1ME2 LINE L1 3510 3631 -2515 2246 113 0 0 chr10 18952490 18952783 -121363982 - AluSx SINE Alu -19 293 1 656 208 61 122 chr10 18952783 18952959 -121363806 + L1ME2 LINE L1 3631 3816 -2330 699 210 0 62 chr10 18952977 18953139 -121363626 + MSTD LTR MaLR 2 153 -243 781 114 35 0 chr10 18953177 18953291 -121363474 + MSTD LTR MaLR 279 396 0 257 264 23 11 chr10 18953291 18953378 -121363387 + L1ME2 LINE L1 3851 3938 -2208 846 165 0 119 chr10 18953385 18953579 -121363186 + AluSg/x SINE Alu 141 311 -1 362 228 0 0 chr10 18953594 18953678 -121363087 + L1MC/D LINE L1 5731 5814 -357 1572 254 103 15 chr10 18953681 18954264 -121362501 + L1ME2 LINE L1 3962 4595 -1551 2419 241 35 19 chr10 18954266 18954916 -121361849 + L1ME2 LINE L1 5493 6153 -11 632 241 67 27 chr10 18954947 18955171 -121361594 + L2 LINE L2 3080 3312 -1 2179 98 0 7 chr10 18955194 18955510 -121361255 - AluSq SINE Alu 0 314 1 736 240 35 66 chr10 18955786 18956074 -121360691 - MER97c DNA MER1_type? 0 1090 812 2195 104 0 7 chr10 18956159 18956456 -121360309 + AluSx SINE Alu 1 295 -17 2302 232 31 28 chr10 18956733 18957336 -121359429 - MER97a DNA MER1_type? -289 605 1 2210 107 10 0 chr10 18957394 18957685 -121359080 + AluSx SINE Alu 1 294 -18 614 173 8 0 chr10 18957688 18957821 -121358944 + (TA)n Simple_repeat Simple_repeat 1 134 0 2103 215 23 14 chr10 18957834 18958267 -121358498 - MER65C LTR ERV1 -24 437 1 2123 107 3 7 chr10 18958614 18958904 -121357861 + AluSx SINE Alu 2 290 -22 1406 180 77 15 chr10 18959900 18960172 -121356593 - AluJo SINE Alu -23 289 1 1636 221 179 2 chr10 18960198 18960627 -121356138 - MLT1D LTR MaLR 0 505 1 2169 110 10 0 chr10 18960762 18961053 -121355712 + AluSx SINE Alu 2 295 -17 4213 151 48 69 chr10 18961520 18961581 -121355184 - L1MB7 LINE L1 -8 6176 6115 2282 93 0 13 chr10 18961581 18961881 -121354884 + AluSx SINE Alu 1 296 -16 4213 151 48 69 chr10 18961881 18962485 -121354280 - L1MB7 LINE L1 -69 6115 5500 2491 142 72 5 chr10 18962485 18962886 -121353879 + MSTA LTR MaLR 1 428 0 4213 151 48 69 chr10 18962886 18962953 -121353812 - L1MB7 LINE L1 -684 5500 5433 2014 147 3 6 chr10 18962953 18963265 -121353500 - AluSq SINE Alu 0 313 3 4213 151 48 69 chr10 18963265 18963549 -121353216 - L1MB7 LINE L1 -751 5433 5186 1811 143 10 14 chr10 18964623 18964917 -121351848 - AluJb SINE Alu -19 293 1 1224 100 0 18 chr10 18965349 18965519 -121351246 + AluSx SINE Alu 1 167 -145 763 147 0 0 chr10 18965635 18965751 -121351014 + AluSp SINE Alu 1 116 -197 228 125 0 0 chr10 18965751 18965833 -121350932 + Alu SINE Alu 250 331 0 331 250 148 0 chr10 18965833 18965941 -121350824 + HsTC2 DNA Tc2 21 144 -1754 * 943 183 27 174 chr10 18965938 18966349 -121350416 + HsTC2 DNA Tc2 1281 1751 -147 210 71 0 0 chr10 18966349 18966377 -121350388 + (CA)n Simple_repeat Simple_repeat 1 28 0 1819 156 3 14 chr10 18966387 18966682 -121350083 - AluJb SINE Alu -20 292 1 943 183 27 174 chr10 18966682 18966775 -121349990 + HsTC2 DNA Tc2 1761 1890 -8 917 285 95 29 chr10 18966762 18967141 -121349624 - MLT1J LTR MaLR -14 497 94 * 788 249 38 33 chr10 18967145 18967358 -121349407 - MER58C DNA MER1_type -1 214 1 1962 113 85 3 chr10 18967396 18967679 -121349086 - AluSx SINE Alu -6 306 1 2067 123 0 13 chr10 18967852 18968154 -121348611 + AluSg SINE Alu 1 298 -12 3713 137 22 95 chr10 18968160 18968545 -121348220 + L1MB3 LINE L1 5440 5851 -332 2497 69 0 3 chr10 18968545 18968851 -121347914 + AluY SINE Alu 1 305 -6 3713 137 22 95 chr10 18968851 18969212 -121347553 + L1MB3 LINE L1 5851 6237 54 2238 86 3 7 chr10 18969212 18969504 -121347261 + L1PA7 LINE L1 5864 6154 0 2124 131 3 0 chr10 18969508 18969806 -121346959 + AluSp SINE Alu 1 299 -14 3713 137 22 95 chr10 18969806 18969855 -121346910 + L1MB3 LINE L1 6132 6183 0 2444 67 0 0 chr10 18969863 18970160 -121346605 + AluY SINE Alu 1 297 -14 1128 247 193 30 chr10 18970350 18970584 -121346181 + MER20B DNA MER1_type 1 195 -588 2758 175 74 17 chr10 18970584 18970844 -121345921 - MER41D LTR ERV1 0 557 313 2404 101 0 0 chr10 18970844 18971150 -121345615 + AluSq SINE Alu 1 306 -7 2758 175 74 17 chr10 18971150 18971416 -121345349 - MER41D LTR ERV1 -244 313 1 1128 247 193 30 chr10 18971416 18971720 -121345045 + MER20B DNA MER1_type 195 627 -156 2196 139 40 3 chr10 18972067 18972420 -121344345 - MLT2D LTR ERVL -48 366 1 2297 107 0 0 chr10 18973004 18973302 -121343463 - AluSg SINE Alu -12 298 1 568 327 71 5 chr10 18973402 18973613 -121343152 - MIR SINE MIR -15 247 23 2801 160 6 26 chr10 18973615 18973909 -121342856 - MER66B LTR ERV1 0 486 203 2202 117 7 0 chr10 18973909 18974216 -121342549 + AluSx SINE Alu 1 309 -3 2801 160 6 26 chr10 18974216 18974390 -121342375 - MER66B LTR ERV1 -283 203 27 1268 153 51 16 chr10 18974446 18974701 -121342064 + MER21A LTR ERV1 1 264 -667 2800 184 51 19 chr10 18974706 18975239 -121341526 + MER21A LTR ERV1 376 925 -6 1516 184 7 14 chr10 18975795 18976083 -121340682 + AluJb SINE Alu 1 286 -26 235 177 32 0 chr10 18976083 18976145 -121340620 + (TA)n Simple_repeat Simple_repeat 1 64 0 246 174 65 76 chr10 18976152 18976244 -121340521 - L1MC4 LINE L1 -1337 6705 6615 724 230 0 0 chr10 18976972 18977098 -121339667 + FLAM_C SINE Alu 2 127 -16 24 0 0 0 chr10 18977098 18977122 -121339643 + AT_rich Low_complexity Low_complexity 1 24 0 2957 77 25 10 chr10 18977696 18978088 -121338677 + MLT2A1 LTR ERVL 1 398 -46 309 73 41 77 chr10 18978089 18978344 -121338421 + (TA)n Simple_repeat Simple_repeat 1 245 0 221 145 29 43 chr10 18978347 18978416 -121338349 + (TATAA)n Simple_repeat Simple_repeat 2 69 0 185 0 0 39 chr10 18978530 18978556 -121338209 + (TA)n Simple_repeat Simple_repeat 1 25 0 257 0 0 29 chr10 18978579 18978613 -121338152 + (TA)n Simple_repeat Simple_repeat 2 34 0 240 82 49 33 chr10 18978633 18978694 -121338071 + (TA)n Simple_repeat Simple_repeat 2 63 0 312 319 40 62 chr10 18978792 18979018 -121337747 + L3 LINE CR1 977 1197 -380 1712 171 7 31 chr10 18979021 18979314 -121337451 + AluJo SINE Alu 3 288 -24 1700 166 15 0 chr10 18979414 18979685 -121337080 - AluJo SINE Alu -37 275 1 318 367 25 32 chr10 18979946 18980104 -121336661 - MIR3 SINE MIR -34 174 18 1914 155 10 0 chr10 18980499 18980803 -121335962 - AluJo SINE Alu -5 307 1 464 256 226 0 chr10 18981579 18981747 -121335018 - MIR SINE MIR -43 219 14 2078 120 0 40 chr10 18982072 18982396 -121334369 - AluSx SINE Alu -1 311 1 1750 184 29 41 chr10 18982428 18982745 -121334020 + Charlie4a DNA MER1_type 49 361 -1600 2198 116 0 3 chr10 18982745 18983048 -121333717 - AluSg SINE Alu -8 302 1 1750 184 29 41 chr10 18983048 18983143 -121333622 + Charlie4a DNA MER1_type 361 456 -52 682 263 80 9 chr10 18983614 18983827 -121332938 + MIR SINE MIR 15 242 -20 1501 166 3 55 chr10 18984016 18984305 -121332460 - MLT2D LTR ERVL 0 414 141 1308 190 38 90 chr10 18984307 18984526 -121332239 - MLT1A1 LTR MaLR -5 360 166 2151 141 0 0 chr10 18984526 18984832 -121331933 - AluSg SINE Alu -4 306 1 1308 190 38 90 chr10 18984832 18984980 -121331785 - MLT1A1 LTR MaLR -199 166 12 892 107 57 7 chr10 18984991 18985131 -121331634 - MLT2D LTR ERVL -267 147 1 807 277 95 69 chr10 18985764 18986000 -121330765 + LTR16B LTR ERVL 2 230 -234 1941 124 13 23 chr10 18986000 18986307 -121330458 + AluSx SINE Alu 1 304 -8 807 277 95 69 chr10 18986307 18986521 -121330244 + LTR16B LTR ERVL 230 464 0 281 341 39 0 chr10 18986597 18986726 -121330039 - MER94 DNA DNA 0 134 1 366 174 121 114 chr10 18986823 18986972 -121329793 - MER103 DNA DNA -7 159 10 933 224 42 80 chr10 18987866 18988312 -121328453 + MLT1A1 LTR MaLR 1 365 0 757 184 6 11 chr10 18988413 18988592 -121328173 + GA-rich Low_complexity Low_complexity 3 180 0 23 0 0 0 chr10 18988961 18988984 -121327781 + AT_rich Low_complexity Low_complexity 1 23 0 938 130 15 0 chr10 18989260 18989391 -121327374 + AluJo SINE Alu 3 135 -177 1189 95 0 0 chr10 18989544 18989691 -121327074 + AluSq SINE Alu 130 276 -37 820 36 27 0 chr10 18989696 18989807 -121326958 + (GAAA)n Simple_repeat Simple_repeat 2 115 0 1968 141 3 0 chr10 18990652 18990935 -121325830 - AluSx SINE Alu -13 299 16 6988 69 23 0 chr10 18990945 18992141 -121324624 - L1PA8 LINE L1 -1 6171 4967 1329 201 18 88 chr10 18992146 18992530 -121324235 + MLT2B1 LTR ERVL 8 364 -156 309 318 169 17 chr10 18992530 18992842 -121323923 + L2 LINE L2 2654 3010 -262 2151 101 3 48 chr10 18993125 18993441 -121323324 - AluSg SINE Alu -8 302 1 1838 115 0 0 chr10 18994252 18994496 -121322269 - AluSx SINE Alu -9 303 60 470 291 33 28 chr10 18994669 18994851 -121321914 - MER5A DNA MER1_type -6 183 1 2729 98 0 6 chr10 18994908 18995274 -121321491 + THE1B LTR MaLR 1 364 0 186 296 14 0 chr10 18995455 18995526 -121321239 + L2 LINE L2 3200 3271 -1 757 211 54 11 chr10 18995884 18996069 -121320696 - MIR SINE MIR -48 214 22 516 305 45 0 chr10 18996595 18996772 -121319993 + MIR SINE MIR 78 262 0 1789 146 57 4 chr10 18996797 18997078 -121319687 - AluJb SINE Alu -16 296 1 2717 228 49 37 chr10 18997876 18998971 -121317794 + L1M4 LINE L1 2298 3405 -2741 899 137 0 39 chr10 18998978 18999131 -121317634 - AluSg/x SINE Alu -59 251 105 1696 114 5 106 chr10 18999293 18999661 -121317104 - L1MB8 LINE L1 -6 6172 5842 221 325 25 25 chr10 18999661 18999781 -121316984 + L2 LINE L2 3189 3308 -5 6510 188 15 8 chr10 19000466 19001591 -121315174 - L1M1 LINE L1 -6274 1291 159 1321 57 36 5 chr10 19001691 19001885 -121314880 - L1PA15-16 LINE L1 -3927 2922 2723 1231 191 0 0 chr10 19001903 19002113 -121314652 - MER2 DNA MER2_type -135 210 1 429 324 21 14 chr10 19002395 19002685 -121314080 - L1M4 LINE L1 -2166 3980 3689 573 275 141 36 chr10 19003632 19003767 -121312998 - MLT1K LTR MaLR -115 473 354 2736 115 36 7 chr10 19003767 19004183 -121312582 - MSTA LTR MaLR 0 428 1 573 275 141 36 chr10 19004183 19004323 -121312442 - MLT1K LTR MaLR -234 354 169 1176 151 5 19 chr10 19005070 19005276 -121311489 - MLT1A1 LTR MaLR -162 203 1 350 321 15 15 chr10 19005386 19005517 -121311248 - L2 LINE L2 0 3272 3142 394 287 106 21 chr10 19006989 19007204 -121309561 + MIR SINE MIR 31 262 0 2260 125 33 39 chr10 19007424 19007784 -121308981 - THE1B LTR MaLR -6 358 1 1948 178 19 26 chr10 19008483 19008860 -121307905 - MSTD LTR MaLR -22 374 1 1345 229 55 20 chr10 19008863 19009261 -121307504 + L1MC/D LINE L1 5267 5678 -2130 237 253 102 121 chr10 19009740 19009906 -121306859 + MIR SINE MIR 29 191 -71 1014 170 42 0 chr10 19011076 19011288 -121305477 - L1MB4 LINE L1 0 6180 5960 380 217 12 0 chr10 19011288 19011371 -121305394 - L1MB4 LINE L1 -614 5566 5483 182 37 37 0 chr10 19011375 19011402 -121305363 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1440 137 0 109 chr10 19011405 19011734 -121305031 - AluJb SINE Alu -9 293 1 1164 175 5 10 chr10 19011756 19011956 -121304809 - AluJb SINE Alu -8 304 106 977 294 79 17 chr10 19012195 19012661 -121304104 - L2 LINE L2 -432 2882 2388 552 199 51 80 chr10 19012827 19013103 -121303662 + L1ME1 LINE L1 3684 3951 -2195 27 29 0 0 chr10 19013311 19013345 -121303420 + AT_rich Low_complexity Low_complexity 1 34 0 1686 171 0 8 chr10 19013466 19013729 -121303036 - AluSx SINE Alu -43 269 9 8571 106 18 18 chr10 19013739 19015233 -121301532 - L1M1 LINE L1 -4219 3346 1778 5576 159 23 1 chr10 19015378 19016929 -121299836 - L1MA3 LINE L1 -326 5979 4381 225 94 0 0 chr10 19016929 19016961 -121299804 + (TG)n Simple_repeat Simple_repeat 2 33 0 5576 159 23 1 chr10 19016961 19017115 -121299650 - L1MA3 LINE L1 -1924 4381 4232 3403 194 54 32 chr10 19017271 19018237 -121298528 + L1ME1 LINE L1 5158 6158 -8 280 81 0 0 chr10 19018522 19018559 -121298206 + L1MA2 LINE L1 6154 6190 -114 229 267 48 29 chr10 19019286 19019391 -121297374 + L2 LINE L2 2896 3002 -270 342 218 252 14 chr10 19019705 19019852 -121296913 + LTR50 LTR ERVL 82 263 -532 741 117 0 0 chr10 19019877 19020005 -121296760 + (TTTTC)n Simple_repeat Simple_repeat 1 128 0 244 175 0 70 chr10 19020026 19020083 -121296682 + LTR50 LTR ERVL 418 470 -325 279 272 74 0 chr10 19020254 19020335 -121296430 + LTR33A LTR ERVL 437 523 0 798 121 25 32 chr10 19020453 19020610 -121296155 + L1MA5 LINE L1 6123 6278 -22 423 253 0 0 chr10 19020631 19020801 -121295964 + (TA)n Simple_repeat Simple_repeat 1 170 0 40 0 0 0 chr10 19020848 19020888 -121295877 + AT_rich Low_complexity Low_complexity 1 40 0 3134 240 80 17 chr10 19020940 19022099 -121294666 + L1MC4a LINE L1 2319 3550 -2596 1007 239 141 25 chr10 19022728 19023126 -121293639 + MER113 DNA MER1_type? 34 477 -44 569 270 61 74 chr10 19023555 19023881 -121292884 + L1MC4a LINE L1 5609 5930 -1878 42 0 0 0 chr10 19024082 19024124 -121292641 + AT_rich Low_complexity Low_complexity 1 42 0 353 214 0 45 chr10 19024132 19024244 -121292521 - L1ME4a LINE L1 -59 6062 5956 1051 168 5 37 chr10 19024579 19024769 -121291996 - AluJb SINE Alu -11 301 118 836 121 0 0 chr10 19024780 19024896 -121291869 - FLAM_C SINE Alu -5 138 23 4940 207 27 34 chr10 19025026 19026092 -121290673 - L1M4 LINE L1 -5483 1059 1 1256 187 137 20 chr10 19026690 19027033 -121289732 + MER31B LTR ERV1 40 422 -44 2332 89 3 13 chr10 19027037 19027351 -121289414 + AluSp SINE Alu 1 311 -2 21 0 0 0 chr10 19027466 19027487 -121289278 + AT_rich Low_complexity Low_complexity 1 21 0 386 181 131 20 chr10 19027904 19028013 -121288752 + L1M LINE L1 5260 5383 -805 2165 112 7 26 chr10 19028013 19028316 -121288449 + AluSx SINE Alu 1 297 -15 386 181 131 20 chr10 19028316 19028327 -121288438 + L1M LINE L1 5383 5391 -797 2067 149 10 0 chr10 19028675 19028984 -121287781 + AluJb SINE Alu 1 312 0 2283 92 10 0 chr10 19029493 19029785 -121286980 + AluY SINE Alu 1 295 -16 1078 143 65 0 chr10 19029785 19029953 -121286812 + AluSg/x SINE Alu 134 312 0 1301 173 41 0 chr10 19029954 19030197 -121286568 + L1ME LINE L1 5320 5572 -594 1448 113 10 63 chr10 19030519 19030820 -121285945 + AluY SINE Alu 1 285 -16 3366 143 31 5 chr10 19031281 19031854 -121284911 - L1MB5 LINE L1 -8 6166 5579 182 336 45 18 chr10 19032178 19032288 -121284477 - L2 LINE L2 -1 3312 3200 439 333 0 0 chr10 19033248 19033371 -121283394 + (CA)n Simple_repeat Simple_repeat 2 124 0 276 214 54 0 chr10 19033371 19033427 -121283338 - MER4-int LTR ERV1 -5428 1170 1112 232 265 88 0 chr10 19034085 19034153 -121282612 + MIR SINE MIR 65 138 -70 2074 145 9 29 chr10 19034154 19034498 -121282267 + MER1B DNA MER1_type 1 337 -2 192 237 0 0 chr10 19034510 19034548 -121282217 + L3b LINE CR1 1520 1557 -26 * 217 240 20 0 chr10 19034516 19034566 -121282199 + MIR3 SINE MIR 147 197 -11 6163 114 30 3 chr10 19035009 19036103 -121280662 + L1PA16 LINE L1 5026 6156 -10 2392 97 0 3 chr10 19036103 19036413 -121280352 + AluSq SINE Alu 1 309 -4 6163 114 30 3 chr10 19036413 19036425 -121280340 + L1PA16 LINE L1 6156 6166 0 26 0 0 0 chr10 19036513 19036539 -121280226 + AT_rich Low_complexity Low_complexity 1 26 0 363 302 83 10 chr10 19036602 19036794 -121279971 + L1M4 LINE L1 4279 4484 -1662 321 284 125 57 chr10 19037221 19037397 -121279368 - MIR SINE MIR -67 195 8 209 258 0 16 chr10 19037974 19038036 -121278729 + G-rich Low_complexity Low_complexity 2 62 0 1784 37 14 5 chr10 19039846 19040063 -121276702 + L1PA5 LINE L1 5936 6154 0 636 277 83 14 chr10 19040163 19040452 -121276313 - HAL1 LINE L1 -848 1659 1351 483 207 0 0 chr10 19040609 19040696 -121276069 + MER58B DNA MER1_type 1 87 -254 791 149 137 19 chr10 19040702 19040863 -121275902 + MSTA LTR MaLR 200 379 -49 1265 158 51 8 chr10 19040873 19041107 -121275658 + MER58B DNA MER1_type 97 340 -1 1290 146 124 41 chr10 19041187 19041454 -121275311 - AluJb SINE Alu -13 289 1 255 268 0 0 chr10 19041566 19041637 -121275128 - L1ME3A LINE L1 -25 6145 6075 447 191 113 9 chr10 19041641 19041756 -121275009 - L1ME3A LINE L1 -282 5888 5762 4351 211 66 11 chr10 19041897 19043129 -121273636 - L1MEc LINE L1 -2857 3358 2110 1380 150 22 22 chr10 19043136 19043403 -121273362 - AluSx SINE Alu -6 306 40 267 342 42 0 chr10 19044544 19044664 -121272101 + L2 LINE L2 2934 3058 -214 1633 269 71 4 chr10 19045416 19045951 -121270814 + L1ME3A LINE L1 5597 6167 -3 245 204 112 82 chr10 19047476 19047574 -121269191 + MIR SINE MIR 70 170 -92 2537 184 28 2 chr10 19047764 19048232 -121268533 + L1MB2 LINE L1 5690 6169 -2 1550 196 7 14 chr10 19048241 19048532 -121268233 + AluJb SINE Alu 2 290 -22 278 275 61 61 chr10 19048593 19048724 -121268041 + HAL1 LINE L1 6 136 -2371 184 242 0 0 chr10 19049624 19049657 -121267108 + L2 LINE L2 3219 3251 -21 289 203 0 72 chr10 19049822 19049891 -121266874 - L2 LINE L2 -9 3304 3241 891 139 7 0 chr10 19050144 19050281 -121266484 + FLAM_C SINE Alu 1 138 -5 2229 145 25 30 chr10 19050541 19050907 -121265858 + THE1B LTR MaLR 1 364 0 381 228 123 57 chr10 19051673 19051884 -121264881 - MER102b DNA MER1_type 0 341 117 253 238 55 85 chr10 19051940 19052104 -121264661 + MIR3 SINE MIR 29 187 -21 411 108 0 181 chr10 19052527 19052815 -121263950 - L1P LINE L1 -804 5342 5107 35373 91 11 15 chr10 19052823 19057044 -121259721 + L1P LINE L1 2 4202 -1944 279 0 0 0 chr10 19057044 19057075 -121259690 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 35373 91 11 15 chr10 19057075 19057993 -121258772 + L1P LINE L1 4202 5122 -1024 280 241 60 12 chr10 19058209 19058292 -121258473 + L2 LINE L2 2605 2691 -623 2212 133 0 0 chr10 19058404 19058713 -121258052 - AluSx SINE Alu -3 309 1 1647 162 7 42 chr10 19059000 19059309 -121257456 + AluJo SINE Alu 1 298 -14 806 146 7 15 chr10 19059314 19059451 -121257314 + AluJo SINE Alu 1 136 -176 4142 84 9 0 chr10 19059452 19059977 -121256788 + L1PA10 LINE L1 5634 6163 -5 767 152 64 0 chr10 19060731 19060856 -121255909 + FLAM_C SINE Alu 1 133 0 306 231 125 29 chr10 19060942 19061046 -121255719 + L2 LINE L2 3134 3247 -25 453 217 200 0 chr10 19061277 19061392 -121255373 + MER91C DNA MER1_type 3 140 0 738 244 85 10 chr10 19061506 19061707 -121255058 - MLT1J LTR MaLR -295 216 1 208 333 48 0 chr10 19061811 19061895 -121254870 + L2 LINE L2 2584 2671 -643 1952 131 0 31 chr10 19062037 19062350 -121254415 - AluSx SINE Alu 0 304 1 659 206 38 60 chr10 19062612 19062796 -121253969 + MLT1E2 LTR MaLR 1 180 -446 1388 142 0 0 chr10 19062802 19062999 -121253766 - AluSg/x SINE Alu -14 298 102 1126 124 6 17 chr10 19063004 19063182 -121253583 + THE1C LTR MaLR 200 375 0 256 289 22 22 chr10 19063356 19063446 -121253319 + L1MC/D LINE L1 4886 4975 -1171 411 285 166 57 chr10 19063697 19063786 -121252979 + L1MC/D LINE L1 5278 5356 -795 7594 48 10 0 chr10 19063786 19064916 -121251849 + L1PA7 LINE L1 5014 6154 0 411 285 166 57 chr10 19064916 19065194 -121251571 + L1MC/D LINE L1 5356 5683 -468 2353 92 0 0 chr10 19067174 19067469 -121249296 + AluSg SINE Alu 1 295 -15 2606 36 0 3 chr10 19068946 19069248 -121247517 + AluY SINE Alu 1 301 -10 390 257 153 0 chr10 19069859 19070003 -121246762 - MIR SINE MIR 0 262 97 337 115 33 16 chr10 19070779 19070871 -121245894 - Alu SINE Alu 0 332 240 393 39 0 0 chr10 19071350 19071401 -121245364 + (TG)n Simple_repeat Simple_repeat 1 51 0 2057 149 10 0 chr10 19071466 19071775 -121244990 - AluJb SINE Alu 0 312 1 2214 96 13 26 chr10 19072134 19072436 -121244329 - AluSq SINE Alu -15 298 1 2236 91 0 14 chr10 19073060 19073394 -121243371 + AluSq SINE Alu 1 330 0 833 205 81 91 chr10 19073527 19073834 -121242931 + L1MC4 LINE L1 7457 7760 -282 2985 109 12 2 chr10 19073838 19074259 -121242506 + MER57B LTR ERV1 10 434 0 1071 201 66 18 chr10 19074259 19074532 -121242233 + L1MC4 LINE L1 7757 8042 0 205 261 0 0 chr10 19075145 19075191 -121241574 + L2 LINE L2 3255 3300 -13 1145 153 137 46 chr10 19075700 19075962 -121240803 + MER4B LTR ERV1 1 286 -324 1607 116 8 25 chr10 19075962 19076166 -121240599 - AluSg/x SINE Alu -5 307 106 2066 171 108 35 chr10 19076166 19076622 -121240143 + LTR2B LTR ERV1 1 489 -1 1607 116 8 25 chr10 19076622 19076658 -121240107 - AluSg/x SINE Alu -206 106 71 2401 97 6 17 chr10 19076658 19077008 -121239757 + MER4E LTR ERV1 434 779 0 282 106 0 0 chr10 19078094 19078141 -121238624 + (CAT)n Simple_repeat Simple_repeat 1 47 0 1905 159 0 24 chr10 19078144 19078440 -121238325 - AluJo SINE Alu -23 289 1 1600 287 139 47 chr10 19079412 19079510 -121237255 - MER115 DNA AcHobo -8 685 597 2123 143 0 9 chr10 19079510 19079825 -121236940 - AluSx SINE Alu 0 312 1 1600 287 139 47 chr10 19079825 19080346 -121236419 - MER115 DNA AcHobo -96 597 9 196 243 106 87 chr10 19080765 19080827 -121235938 + MIR3 SINE MIR 7 66 -187 2238 125 0 0 chr10 19080827 19081132 -121235633 - AluSx SINE Alu -7 305 1 196 243 106 87 chr10 19081132 19081206 -121235559 + MIR3 SINE MIR 66 160 -93 1600 134 115 7 chr10 19081771 19082040 -121234725 + AluSg1 SINE Alu 2 299 -10 2137 126 3 0 chr10 19082172 19082465 -121234300 - AluSq SINE Alu -19 294 1 1199 127 6 6 chr10 19083522 19083695 -121233070 - AluSc SINE Alu -11 298 126 2471 93 0 0 chr10 19083698 19084009 -121232756 - AluSx SINE Alu -1 311 1 1197 154 20 36 chr10 19084622 19084869 -121231896 + AluJo SINE Alu 67 309 -3 1973 110 46 7 chr10 19086006 19086288 -121230477 - AluSx SINE Alu -19 293 1 2316 115 0 0 chr10 19086828 19087140 -121229625 + AluJb SINE Alu 1 312 0 238 202 55 73 chr10 19087154 19087263 -121229502 + L1ME4a LINE L1 5997 6103 -18 273 195 6 0 chr10 19087266 19087322 -121229443 + Alu SINE Alu 1 39 -261 258 375 44 47 chr10 19088643 19089120 -121227645 + L2 LINE L2 2570 3044 -228 1956 115 52 0 chr10 19089168 19089476 -121227289 - AluSx SINE Alu 0 322 1 276 271 207 0 chr10 19089662 19089802 -121226963 + L2 LINE L2 3117 3285 -28 2453 90 0 0 chr10 19089884 19090184 -121226581 - AluSx SINE Alu -12 300 1 203 321 12 0 chr10 19090187 19090268 -121226497 + L2 LINE L2 3231 3312 -1 2173 114 0 3 chr10 19090923 19091221 -121225544 - AluSx SINE Alu -15 297 1 1527 106 66 4 chr10 19091389 19091645 -121225120 - L1MA8 LINE L1 -5 6286 6015 2327 95 0 0 chr10 19091743 19092038 -121224727 - AluSx SINE Alu -17 295 1 1156 164 16 62 chr10 19092947 19093054 -121223711 + L1MB3 LINE L1 5683 5793 -390 2500 50 17 3 chr10 19093054 19093355 -121223410 + AluY SINE Alu 1 305 -6 1156 164 16 62 chr10 19093355 19093491 -121223274 + L1MB3 LINE L1 5793 5915 -268 1864 151 0 3 chr10 19093572 19093857 -121222908 - AluJb SINE Alu -28 284 1 1266 139 13 21 chr10 19093857 19094094 -121222671 + L1MB3 LINE L1 5908 6142 -41 2290 117 0 0 chr10 19094094 19094394 -121222371 + AluSx SINE Alu 1 300 -12 2202 136 0 0 chr10 19094523 19094831 -121221934 + AluSx SINE Alu 1 308 -4 1104 196 32 0 chr10 19094831 19095051 -121221714 + AluJo SINE Alu 86 312 0 663 217 114 53 chr10 19095356 19095655 -121221110 + Charlie7 DNA MER1_type 323 639 -1973 429 211 62 16 chr10 19095675 19095803 -121220962 - MIR SINE MIR -20 242 109 298 188 0 0 chr10 19095861 19095909 -121220856 + Charlie7 DNA MER1_type 642 689 -1923 278 242 0 44 chr10 19095922 19096013 -121220752 + Charlie7 DNA MER1_type 2525 2611 -1 188 260 80 50 chr10 19096047 19096147 -121220618 - MIR3 SINE MIR -103 105 3 1554 171 3 58 chr10 19096870 19097179 -121219586 - AluJo SINE Alu -20 292 1 358 197 40 0 chr10 19097189 19097265 -121219500 - L1MC5 LINE L1 -723 7238 7160 262 358 17 17 chr10 19097317 19097357 -121219408 + Tigger8 DNA MER2_type 2 41 -625 1962 135 36 0 chr10 19097357 19097638 -121219127 - AluSx SINE Alu -21 291 1 262 358 17 17 chr10 19097638 19097717 -121219048 + Tigger8 DNA MER2_type 40 121 -545 2176 197 22 78 chr10 19097782 19098007 -121218758 + L1ME LINE L1 5119 5355 -811 2412 84 3 0 chr10 19098007 19098304 -121218461 - AluY SINE Alu -13 298 1 2176 197 22 78 chr10 19098304 19098587 -121218178 + L1ME LINE L1 5355 5590 -576 1789 137 4 11 chr10 19098587 19098865 -121217900 + AluSx SINE Alu 37 312 0 2176 197 22 78 chr10 19098865 19099079 -121217686 + L1ME LINE L1 5590 5814 -352 1843 139 57 0 chr10 19099219 19099499 -121217266 + AluJb SINE Alu 1 296 -16 516 305 45 0 chr10 19099524 19099701 -121217064 - MIR SINE MIR 0 262 78 2272 74 23 3 chr10 19099849 19100148 -121216617 - AluY SINE Alu -6 305 1 2541 57 0 3 chr10 19100536 19100832 -121215933 + AluY SINE Alu 1 295 -16 732 189 8 0 chr10 19100843 19100975 -121215790 + FLAM_A SINE Alu 1 133 0 369 286 68 48 chr10 19101283 19101489 -121215276 - L2 LINE L2 -101 3212 3003 2381 74 3 6 chr10 19101490 19101802 -121214963 + AluY SINE Alu 1 311 0 450 0 0 0 chr10 19101949 19101999 -121214766 + (TG)n Simple_repeat Simple_repeat 2 51 0 760 174 0 0 chr10 19101999 19102120 -121214645 - FLAM_A SINE Alu -9 124 4 616 165 128 0 chr10 19103013 19103122 -121213643 + FLAM_C SINE Alu 2 124 -19 236 336 92 0 chr10 19103446 19103565 -121213200 - L1ME LINE L1 -5610 460 331 2018 101 7 28 chr10 19104227 19104553 -121212212 - AluY SINE Alu 0 320 1 466 238 144 20 chr10 19104713 19104915 -121211850 + MIR SINE MIR 23 249 -13 614 153 9 36 chr10 19105065 19105176 -121211589 + FLAM_C SINE Alu 25 132 -11 2094 117 0 3 chr10 19105186 19105484 -121211281 + AluSx SINE Alu 1 297 -15 2378 69 10 3 chr10 19105492 19105797 -121210968 + AluY SINE Alu 5 311 0 180 0 0 0 chr10 19106146 19106166 -121210599 + (A)n Simple_repeat Simple_repeat 1 20 0 22 35 0 0 chr10 19106394 19106423 -121210342 + GC_rich Low_complexity Low_complexity 1 29 0 23 68 0 0 chr10 19106900 19106944 -121209821 + GC_rich Low_complexity Low_complexity 1 44 0 696 208 52 13 chr10 19107261 19107415 -121209350 - FRAM SINE Alu -6 160 1 210 150 0 0 chr10 19107534 19107574 -121209191 + (T)n Simple_repeat Simple_repeat 1 40 0 1977 86 8 4 chr10 19107575 19107832 -121208933 - AluSx SINE Alu -54 258 1 369 58 0 0 chr10 19107857 19107909 -121208856 + (TG)n Simple_repeat Simple_repeat 2 53 0 881 95 44 14 chr10 19107921 19108067 -121208698 + LTR7 LTR ERV1 1 199 -251 275 197 53 40 chr10 19108089 19108165 -121208600 + MIR SINE MIR 55 131 -131 520 131 12 0 chr10 19108187 19108271 -121208494 + AluS SINE Alu 225 309 -3 2261 115 3 0 chr10 19108271 19108576 -121208189 + AluSx SINE Alu 1 306 -6 2932 210 124 41 chr10 19108576 19109638 -121207127 + L1ME1 LINE L1 4180 5466 -700 2335 108 0 0 chr10 19109638 19109944 -121206821 + AluSq SINE Alu 1 306 -7 2932 210 124 41 chr10 19109944 19110643 -121206122 + L1ME1 LINE L1 5466 6105 -61 2083 114 21 0 chr10 19110648 19110938 -121205827 + AluSx SINE Alu 1 296 -16 21 36 0 0 chr10 19110980 19111008 -121205757 + AT_rich Low_complexity Low_complexity 1 28 0 421 260 143 0 chr10 19111453 19111607 -121205158 - MIR SINE MIR -66 196 21 2127 122 3 0 chr10 19111998 19112286 -121204479 + AluSx SINE Alu 1 289 -23 2076 69 77 0 chr10 19112485 19112781 -121203984 + AluY SINE Alu 1 311 0 2177 118 0 10 chr10 19112782 19113096 -121203669 - L1PB3 LINE L1 -14 6140 5830 1838 142 52 0 chr10 19113283 19113572 -121203193 - AluSx SINE Alu -8 304 1 1947 221 46 67 chr10 19114421 19114733 -121202032 - L1ME1 LINE L1 -5 6161 5844 694 203 10 99 chr10 19114733 19114804 -121201961 + MER45A DNA AcHobo 4 80 -1501 2181 120 0 0 chr10 19114804 19115105 -121201660 + AluY SINE Alu 1 301 -10 694 203 10 99 chr10 19115105 19115225 -121201540 + MER45A DNA AcHobo 80 178 0 1947 221 46 67 chr10 19115225 19115420 -121201345 - L1ME1 LINE L1 -322 5844 5667 757 185 8 0 chr10 19115420 19115550 -121201215 + FLAM_C SINE Alu 2 132 -1 1947 221 46 67 chr10 19115550 19115651 -121201114 - L1ME1 LINE L1 -499 5667 5565 2382 78 3 0 chr10 19115652 19115945 -121200820 - AluY SINE Alu -17 294 1 1246 188 21 79 chr10 19116267 19116511 -121200254 - L1ME1 LINE L1 -594 5572 5316 1450 146 43 94 chr10 19116511 19116839 -121199926 - AluJo SINE Alu -1 311 1 2092 108 0 11 chr10 19116841 19117127 -121199638 - AluSg SINE Alu -19 291 9 1246 188 21 79 chr10 19117127 19117263 -121199502 - L1ME1 LINE L1 -851 5315 5207 670 164 86 0 chr10 19117268 19117384 -121199381 - FLAM_C SINE Alu -5 138 13 1880 224 20 9 chr10 19117392 19117847 -121198918 - L1ME1 LINE L1 -951 5195 4736 6707 39 6 15 chr10 19117847 19118645 -121198120 - SVA Other Other 0 1386 596 212 175 0 53 chr10 19118721 19118778 -121197987 + T-rich Low_complexity Low_complexity 1 54 0 1416 174 10 84 chr10 19119339 19119650 -121197115 - AluJo SINE Alu -24 288 1 2249 113 0 7 chr10 19120686 19120987 -121195778 + AluSx SINE Alu 1 299 -13 2335 101 3 0 chr10 19121348 19121645 -121195120 + AluSx SINE Alu 3 300 -12 1961 152 0 10 chr10 19122275 19122578 -121194187 - AluJb SINE Alu -12 300 1 2288 98 3 19 chr10 19122941 19123119 -121193646 - AluSx SINE Alu 0 312 140 2141 110 3 35 chr10 19123119 19123436 -121193329 - AluSq SINE Alu -6 307 1 2288 98 3 19 chr10 19123436 19123574 -121193191 - AluSx SINE Alu -172 140 1 184 296 80 0 chr10 19123898 19123986 -121192779 + MIR3 SINE MIR 108 202 -6 2180 130 0 0 chr10 19124679 19124980 -121191785 - AluSx SINE Alu -11 301 1 242 29 29 0 chr10 19125029 19125064 -121191701 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 544 96 0 12 chr10 19125068 19125151 -121191614 - L1PA13 LINE L1 -19 6144 6063 1094 141 13 0 chr10 19125151 19125307 -121191458 - AluSx SINE Alu -154 158 1 4618 86 5 0 chr10 19125395 19125997 -121190768 - L1PA12 LINE L1 -44 6124 5520 1856 158 0 20 chr10 19126427 19126730 -121190035 - AluJb SINE Alu -5 307 11 2098 102 0 41 chr10 19127038 19127364 -121189401 - AluSq SINE Alu 0 314 1 1684 147 51 17 chr10 19128098 19128391 -121188374 + AluJo SINE Alu 1 303 -9 2118 125 3 0 chr10 19128414 19128709 -121188056 - AluSx SINE Alu -16 296 1 297 326 0 23 chr10 19128749 19128881 -121187884 - MIR SINE MIR -132 130 2 375 226 49 123 chr10 19129277 19129429 -121187336 - MIR SINE MIR -40 222 87 1805 171 3 7 chr10 19129429 19129728 -121187037 + AluJo SINE Alu 1 298 -14 375 226 49 123 chr10 19129728 19129779 -121186986 - MIR SINE MIR -175 87 34 2047 141 0 10 chr10 19129867 19130172 -121186593 - AluSx SINE Alu 0 312 11 457 356 24 10 chr10 19130543 19130751 -121186014 + MIR SINE MIR 41 251 -11 208 196 18 18 chr10 19130992 19131048 -121185717 + (TTATG)n Simple_repeat Simple_repeat 4 59 0 437 323 90 0 chr10 19131693 19131882 -121184883 - MIR SINE MIR 0 262 57 1909 39 0 13 chr10 19131892 19132125 -121184640 + AluY SINE Alu 81 310 -1 2795 88 3 0 chr10 19132759 19133122 -121183643 - THE1B LTR MaLR 0 364 1 2288 111 0 3 chr10 19133524 19133830 -121182935 + AluSx SINE Alu 1 305 -7 251 314 83 0 chr10 19134345 19134466 -121182299 - L3 LINE CR1 -342 1235 1105 185 266 127 13 chr10 19134599 19134678 -121182087 - L3 LINE CR1 -972 605 518 565 92 20 0 chr10 19134688 19134786 -121181979 + (TA)n Simple_repeat Simple_repeat 2 101 0 1629 171 55 0 chr10 19134791 19135066 -121181699 - AluJo SINE Alu -22 290 1 1055 167 142 54 chr10 19135321 19135561 -121181204 + AluJo SINE Alu 39 299 -13 564 261 72 43 chr10 19135903 19136110 -121180655 + MIR SINE MIR 2 214 -48 2132 164 28 91 chr10 19136624 19136944 -121179821 - MLT1C LTR MaLR 0 467 187 1973 124 38 7 chr10 19136944 19137234 -121179531 - AluSc SINE Alu -10 299 1 2132 164 28 91 chr10 19137234 19137408 -121179357 - MLT1C LTR MaLR -280 187 4 5204 196 67 76 chr10 19137412 19138793 -121177972 - MLT1C-int LTR MaLR -1 1370 2 2187 183 34 55 chr10 19138801 19139272 -121177493 - MLT1C LTR MaLR -6 461 1 2397 87 0 0 chr10 19139295 19139605 -121177160 + AluSg SINE Alu 1 310 0 1713 143 56 4 chr10 19141368 19141634 -121175131 - AluJo SINE Alu -32 280 1 356 328 30 0 chr10 19141664 19141795 -121174970 - L2 LINE L2 0 3272 3138 2134 132 3 3 chr10 19141867 19142163 -121174602 + AluSx SINE Alu 3 298 -14 4781 183 46 16 chr10 19142844 19144707 -121172058 - L1MB4 LINE L1 -10 6406 4487 537 107 49 0 chr10 19144709 19144831 -121171934 + (TG)n Simple_repeat Simple_repeat 2 129 0 748 214 6 13 chr10 19144831 19144990 -121171775 - L1MB4 LINE L1 -1893 4489 4332 355 267 156 44 chr10 19144997 19145222 -121171543 - L1MB4 LINE L1 -6022 362 113 1979 170 14 24 chr10 19145222 19145420 -121171345 + MER47A DNA MER2_type 1 195 -2128 3322 168 54 87 chr10 19145420 19146232 -121170533 - LTR1 LTR ERV1 0 785 1 1979 170 14 24 chr10 19146232 19146403 -121170362 + MER47A DNA MER2_type 195 366 0 303 317 0 10 chr10 19146404 19146505 -121170260 - L1MB4 LINE L1 -6271 113 14 2231 106 0 0 chr10 19146705 19146998 -121169767 + AluSx SINE Alu 1 293 -19 22 0 0 0 chr10 19147427 19147449 -121169316 + AT_rich Low_complexity Low_complexity 1 22 0 2132 141 0 3 chr10 19147701 19148014 -121168751 - AluSx SINE Alu 0 312 1 214 198 18 63 chr10 19148526 19148637 -121168128 + CT-rich Low_complexity Low_complexity 4 109 0 191 86 57 0 chr10 19149479 19149514 -121167251 - L3 LINE CR1 -173 1404 1368 186 326 0 41 chr10 19149491 19149589 -121167176 - L3b LINE CR1 -193 1390 1297 * 885 254 10 5 chr10 19149957 19150166 -121166599 + MIR SINE MIR 51 260 -2 858 226 62 25 chr10 19150200 19150225 -121166540 - MER33 DNA MER1_type -2333 252 229 2160 131 0 0 chr10 19150225 19150523 -121166242 - AluSx SINE Alu -14 298 1 858 226 62 25 chr10 19150523 19150740 -121166025 - MER33 DNA MER1_type -2356 229 1 1446 161 9 85 chr10 19150999 19151316 -121165449 - AluJb SINE Alu -19 293 1 668 185 22 99 chr10 19151817 19151998 -121164767 + MER63B DNA MER1_type 2 195 -1493 2194 105 0 10 chr10 19151998 19152303 -121164462 - AluSg SINE Alu -8 302 1 668 185 22 99 chr10 19152303 19152325 -121164440 + MER63B DNA MER1_type 195 1035 -27 304 312 50 21 chr10 19152464 19152605 -121164160 - MIR3 SINE MIR -6 202 58 304 169 0 17 chr10 19153072 19153131 -121163634 - L1MC4 LINE L1 -1337 6705 6648 2107 138 0 3 chr10 19153132 19153429 -121163336 - AluJb SINE Alu -15 297 2 602 158 271 0 chr10 19153434 19153567 -121163198 + MER58B DNA MER1_type 173 341 0 4450 69 53 63 chr10 19154170 19154899 -121161866 - SVA Other Other -520 866 145 13834 88 65 5 chr10 19154934 19156952 -121159813 - HERVH LTR ERV1 -5574 2139 1 737 86 0 19 chr10 19156954 19157059 -121159706 - LTR7 LTR ERV1 -2 448 346 2232 106 0 7 chr10 19157389 19157690 -121159075 + AluSx SINE Alu 1 299 -13 254 282 0 64 chr10 19157814 19157892 -121158873 - MIR3 SINE MIR -28 180 108 432 158 197 47 chr10 19158803 19158930 -121157835 - Charlie2 DNA MER1_type -2 2860 2715 2952 257 22 39 chr10 19159119 19159208 -121157557 - L1MEc LINE L1 -2605 3610 3521 981 115 0 0 chr10 19159208 19159338 -121157427 + FLAM_C SINE Alu 1 130 -3 2952 257 22 39 chr10 19159338 19160377 -121156388 - L1MEc LINE L1 -2694 3521 2501 3767 268 61 84 chr10 19160379 19161081 -121155684 - L1MEc LINE L1 -4023 2373 1657 331 127 0 35 chr10 19161081 19161148 -121155617 + MER2 DNA MER2_type 15 79 -164 3767 268 61 84 chr10 19161148 19161490 -121155275 - L1MEc LINE L1 -4739 1657 1309 2255 65 3 55 chr10 19161490 19161797 -121154968 - AluSp SINE Alu -22 291 1 3767 268 61 84 chr10 19161797 19162010 -121154755 - L1MEc LINE L1 -5087 1309 1093 2470 59 0 19 chr10 19162010 19162317 -121154448 - AluY SINE Alu -10 301 1 3767 268 61 84 chr10 19162317 19163023 -121153742 - L1MEc LINE L1 -5303 1093 403 2295 94 3 3 chr10 19163023 19163321 -121153444 - AluSq SINE Alu -15 298 1 3767 268 61 84 chr10 19163321 19163706 -121153059 - L1MEc LINE L1 -5993 403 11 1030 280 97 15 chr10 19163815 19164283 -121152482 + MLT1G1 LTR MaLR 1 557 -38 2406 83 3 0 chr10 19164301 19164601 -121152164 - AluSp SINE Alu -10 303 3 213 286 0 0 chr10 19164674 19164723 -121152042 - L2 LINE L2 -10 3303 3255 316 298 76 19 chr10 19164992 19165150 -121151615 + L2 LINE L2 3147 3313 0 246 362 52 33 chr10 19165144 19165257 -121151508 - L2 LINE L2 -547 2767 2647 * 1645 235 19 21 chr10 19165257 19165631 -121151134 - MLT1A2 LTR MaLR 0 374 2 246 362 52 33 chr10 19165631 19165727 -121151038 - L2 LINE L2 -667 2647 2554 2269 110 0 3 chr10 19165878 19166188 -121150577 - AluSx SINE Alu -3 309 1 38 22 0 0 chr10 19166455 19166500 -121150265 + AT_rich Low_complexity Low_complexity 1 45 0 404 207 149 35 chr10 19167009 19167183 -121149582 - L1ME4a LINE L1 -2 6119 5926 612 165 150 15 chr10 19167326 19167459 -121149306 - MIR SINE MIR -11 251 101 438 296 113 20 chr10 19167459 19167706 -121149059 - L1ME4a LINE L1 -349 5772 5503 1675 48 19 5 chr10 19167749 19167958 -121148807 - AluSx SINE Alu -100 212 1 183 42 0 0 chr10 19170018 19170042 -121146723 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 255 321 143 24 chr10 19170352 19170520 -121146245 + MIR SINE MIR 65 252 -10 961 231 23 14 chr10 19171082 19171298 -121145467 - MER20 DNA MER1_type -1 218 1 21 36 0 0 chr10 19171881 19171909 -121144856 + AT_rich Low_complexity Low_complexity 1 28 0 530 240 8 16 chr10 19171962 19172087 -121144678 + L2 LINE L2 3190 3313 0 532 268 174 13 chr10 19172163 19172398 -121144367 + L2 LINE L2 1888 2160 -1154 842 228 36 36 chr10 19172432 19172656 -121144109 + MIR SINE MIR 2 225 -37 1012 307 14 17 chr10 19172686 19173048 -121143717 + L2 LINE L2 2185 2545 -769 231 269 0 0 chr10 19173053 19173105 -121143660 + LTR30 LTR ERV1 1 52 -670 1397 149 31 9 chr10 19173105 19173333 -121143432 + LTR12 LTR ERV1 53 285 -429 382 200 11 0 chr10 19173334 19173424 -121143341 + LTR30 LTR ERV1 553 643 -79 605 139 0 0 chr10 19173425 19173511 -121143254 + LTR12 LTR ERV1 481 566 -148 725 305 120 38 chr10 19173511 19174020 -121142745 + L2 LINE L2 2540 3125 -188 1724 163 36 7 chr10 19174020 19174321 -121142444 + AluJo SINE Alu 1 310 -2 725 305 120 38 chr10 19174321 19174527 -121142238 + L2 LINE L2 3125 3313 0 825 156 0 8 chr10 19174689 19174811 -121141954 - AluSq/x SINE Alu -190 122 2 190 313 21 21 chr10 19175168 19175264 -121141501 + MIR SINE MIR 107 202 -60 359 346 110 53 chr10 19175285 19175682 -121141083 + L2 LINE L2 2318 2754 -560 2607 65 0 0 chr10 19175682 19175990 -121140775 + AluY SINE Alu 1 308 -3 359 346 110 53 chr10 19175990 19176121 -121140644 + L2 LINE L2 2754 2876 -438 307 162 118 15 chr10 19176192 19176260 -121140505 + MIR SINE MIR 162 236 -26 507 240 98 113 chr10 19177844 19178119 -121138646 + MER21B LTR ERV1 32 302 -561 * 840 206 0 0 chr10 19178118 19178278 -121138487 + ALR/Alpha Satellite centromeric 1 160 -12 542 275 80 69 chr10 19178293 19178438 -121138327 + MER21B LTR ERV1 300 442 -344 1576 193 48 12 chr10 19178438 19178770 -121137995 - MER2 DNA MER2_type 0 344 1 542 275 80 69 chr10 19178770 19179026 -121137739 + MER21B LTR ERV1 442 780 -6 2351 70 0 0 chr10 19179110 19179426 -121137339 - AluY SINE Alu 0 316 1 895 227 33 93 chr10 19180814 19180932 -121135833 - HAL1 LINE L1 -1534 973 849 2226 87 3 3 chr10 19180932 19181219 -121135546 + AluY SINE Alu 16 302 -9 895 227 33 93 chr10 19181219 19181466 -121135299 - HAL1 LINE L1 -1658 849 630 490 204 0 20 chr10 19181474 19181572 -121135193 - L1MEc LINE L1 -2309 4117 4022 2606 187 91 57 chr10 19181572 19182273 -121134492 - MER50 LTR ERV1 0 734 10 4129 224 45 17 chr10 19182274 19183424 -121133341 - L1MEc LINE L1 -2396 4030 2849 1549 147 124 8 chr10 19183426 19183691 -121133074 - AluJb SINE Alu -16 296 1 3746 165 24 42 chr10 19183691 19184368 -121132397 - L1MEc LINE L1 -3948 2478 1938 1708 167 27 10 chr10 19184368 19184667 -121132098 - AluJo SINE Alu -8 304 1 3746 165 24 42 chr10 19184667 19184883 -121131882 - L1MEc LINE L1 -4488 1938 1720 21 0 0 0 chr10 19185100 19185121 -121131644 + AT_rich Low_complexity Low_complexity 1 21 0 1011 191 0 0 chr10 19185509 19185677 -121131088 + FAM SINE Alu 1 168 -7 195 331 194 21 chr10 19186268 19186603 -121130162 + L2 LINE L2 2076 2468 -846 791 256 40 18 chr10 19187500 19187723 -121129042 + MIR SINE MIR 6 233 -29 220 217 0 22 chr10 19188432 19188478 -121128287 + CT-rich Low_complexity Low_complexity 1 45 0 1228 159 53 4 chr10 19188805 19189050 -121127715 + ORSL DNA AcHobo 2 258 -17 726 174 162 0 chr10 19189179 19189346 -121127419 - L1MB3 LINE L1 -9 6174 5981 29 28 0 0 chr10 19189367 19189403 -121127362 + AT_rich Low_complexity Low_complexity 1 36 0 189 107 0 0 chr10 19190141 19190169 -121126596 + (CATATA)n Simple_repeat Simple_repeat 6 33 0 228 241 86 52 chr10 19190194 19190310 -121126455 - L1MC4a LINE L1 -1635 6173 6054 2439 74 0 10 chr10 19191292 19191601 -121125164 - AluY SINE Alu -5 306 1 281 333 91 8 chr10 19191838 19191970 -121124795 - MIR SINE MIR 0 262 120 2024 126 17 0 chr10 19192033 19192326 -121124439 - AluSq SINE Alu -15 298 1 394 301 57 53 chr10 19192438 19192647 -121124118 - L2 LINE L2 -20 3293 3084 1039 251 178 11 chr10 19192843 19193202 -121123563 - L2 LINE L2 -2414 900 482 3115 175 50 38 chr10 19193236 19193952 -121122813 - L1MC2 LINE L1 -55 6289 5565 505 311 105 20 chr10 19193957 19194568 -121122197 - L1MC2 LINE L1 -1115 5031 4369 1907 93 20 96 chr10 19194591 19194934 -121121831 - AluYb8 SINE Alu -1 317 1 385 309 0 25 chr10 19194934 19195096 -121121669 - L2 LINE L2 -1600 1714 1557 365 301 98 30 chr10 19195215 19195348 -121121417 - MIR3 SINE MIR -63 145 4 186 252 243 0 chr10 19196261 19196368 -121120397 - MIR SINE MIR -3 259 127 247 239 0 0 chr10 19198622 19198668 -121118097 + MIR SINE MIR 5 50 -212 185 367 0 0 chr10 19198670 19198730 -121118035 + MIR SINE MIR 201 260 -2 808 231 133 80 chr10 19199158 19199705 -121117060 - MLT1G1 LTR MaLR 0 567 4 2097 136 3 0 chr10 19200127 19200422 -121116343 + AluSx SINE Alu 1 296 -16 447 284 18 0 chr10 19200554 19200663 -121116102 + L2 LINE L2 3150 3260 -12 325 320 0 8 chr10 19201527 19201655 -121115110 - MER94 DNA DNA -4 130 4 26 30 0 0 chr10 19201786 19201819 -121114946 + AT_rich Low_complexity Low_complexity 1 33 0 212 231 0 0 chr10 19202604 19202643 -121114122 + L2 LINE L2 3263 3301 -12 1491 182 38 40 chr10 19202884 19203165 -121113600 - L1MB7 LINE L1 -25 6159 5878 2020 126 7 10 chr10 19203165 19203458 -121113307 - AluSx SINE Alu -20 292 1 1491 182 38 40 chr10 19203458 19203523 -121113242 - L1MB7 LINE L1 -306 5878 5814 * 3575 177 84 21 chr10 19203514 19204469 -121112296 - L1MB2 LINE L1 -4 6167 5148 1088 213 36 115 chr10 19204499 19205115 -121111650 - L1MB2 LINE L1 -2559 3587 3021 * 3429 138 98 44 chr10 19205100 19205321 -121111444 - L1MB3 LINE L1 -1 6182 5974 1626 186 59 3 chr10 19205321 19205611 -121111154 - AluJo SINE Alu -6 306 1 3429 138 98 44 chr10 19205611 19206092 -121110673 - L1MB3 LINE L1 -209 5974 5442 844 245 69 8 chr10 19206105 19206480 -121110285 - L1MB2 LINE L1 -3104 3042 2645 1114 224 162 13 chr10 19207773 19208225 -121108540 - L1ME2 LINE L1 -3 6232 5723 1402 264 44 6 chr10 19208275 19208775 -121107990 - L1ME2 LINE L1 -3265 2950 2432 1396 198 21 11 chr10 19209074 19209357 -121107408 - AluJb SINE Alu -22 290 5 567 266 149 17 chr10 19209418 19209821 -121106944 - L1ME2 LINE L1 -5215 1181 726 21 0 0 0 chr10 19210440 19210461 -121106304 + AT_rich Low_complexity Low_complexity 1 21 0 1370 122 18 62 chr10 19211277 19211702 -121105063 - LTR42 LTR ERVL -11 484 1 2076 117 3 10 chr10 19212278 19212576 -121104189 - AluSg SINE Alu -14 296 1 1936 116 12 61 chr10 19213092 19213419 -121103346 + AluSx SINE Alu 1 311 -1 1847 139 7 7 chr10 19214361 19214662 -121102103 - AluSx SINE Alu -11 301 1 531 258 174 7 chr10 19215653 19215808 -121100957 + MER5A DNA MER1_type 9 189 0 781 216 36 21 chr10 19215925 19216119 -121100646 - MIR3 SINE MIR -9 199 3 2356 55 0 0 chr10 19217136 19217411 -121099354 + AluY SINE Alu 1 275 -36 216 0 0 0 chr10 19217411 19217435 -121099330 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 292 264 9 5 chr10 19217520 19217629 -121099136 - L2 LINE L2 -1 3271 3115 216 184 20 0 chr10 19217640 19217689 -121099076 - MIR SINE MIR -15 247 198 246 283 157 26 chr10 19217717 19217908 -121098857 - L1MDa LINE L1 -4179 2361 2146 691 236 25 19 chr10 19217983 19218140 -121098625 - MIR SINE MIR -92 170 13 447 329 123 18 chr10 19219499 19220004 -121096761 - L1MC4a LINE L1 -1914 5894 5337 400 352 53 11 chr10 19220023 19220287 -121096478 - L1MC4a LINE L1 -861 5285 5011 1211 179 54 8 chr10 19221745 19222053 -121094712 - MLT1A1 LTR MaLR 0 365 8 2006 88 0 33 chr10 19222854 19223128 -121093637 - AluSq SINE Alu -48 265 1 25 0 0 0 chr10 19223668 19223693 -121093072 + AT_rich Low_complexity Low_complexity 1 25 0 26 30 0 0 chr10 19224612 19224645 -121092120 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr10 19226275 19226305 -121090460 + AT_rich Low_complexity Low_complexity 1 30 0 426 326 132 10 chr10 19226377 19226681 -121090084 - L1ME LINE L1 -297 5824 5484 901 194 148 5 chr10 19227321 19227517 -121089248 + MER58A DNA MER1_type 1 224 0 741 275 18 18 chr10 19227517 19227738 -121089027 + Charlie2 DNA MER1_type 68 288 -2574 922 220 153 3 chr10 19227762 19228044 -121088721 + Charlie2 DNA MER1_type 1855 2178 -684 * 1092 231 176 12 chr10 19228042 19228532 -121088233 + Charlie2 DNA MER1_type 2287 2856 -6 2333 100 0 3 chr10 19228627 19228937 -121087828 + AluSg SINE Alu 1 309 -1 21 0 0 0 chr10 19229320 19229341 -121087424 + AT_rich Low_complexity Low_complexity 1 21 0 830 163 0 0 chr10 19229996 19230125 -121086640 - FRAM SINE Alu -16 160 32 1592 156 22 18 chr10 19231690 19231992 -121084773 + AluJb SINE Alu 6 308 0 269 235 90 57 chr10 19232170 19232271 -121084494 + MER5A DNA MER1_type 18 127 -51 1325 226 0 3 chr10 19232271 19232576 -121084189 - AluY SINE Alu -5 306 3 269 235 90 57 chr10 19232576 19232630 -121084135 + MER5A DNA MER1_type 127 178 0 2292 84 0 3 chr10 19233027 19233348 -121083417 + AluY SINE Alu 1 311 0 2130 78 29 46 chr10 19233778 19234085 -121082680 - AluY SINE Alu -8 303 2 23 33 0 0 chr10 19234384 19234414 -121082351 + AT_rich Low_complexity Low_complexity 1 30 0 2041 173 34 32 chr10 19234942 19235490 -121081275 + MLT2A2 LTR ERVL 1 554 0 48 88 0 0 chr10 19235971 19236096 -121080669 + AT_rich Low_complexity Low_complexity 1 125 0 1089 120 20 0 chr10 19236151 19236301 -121080464 - AluSg/x SINE Alu -16 294 142 317 24 0 0 chr10 19236301 19236342 -121080423 + MADE1 DNA Mariner 40 80 0 24 32 0 0 chr10 19236342 19236373 -121080392 + AT_rich Low_complexity Low_complexity 1 31 0 1743 126 59 0 chr10 19236801 19237071 -121079694 - AluSx SINE Alu -20 292 7 371 260 104 46 chr10 19237538 19237711 -121079054 - MIR SINE MIR -3 259 77 1887 168 3 0 chr10 19237842 19238140 -121078625 - AluJo SINE Alu -13 299 1 2345 87 3 0 chr10 19238804 19239102 -121077663 + AluSq SINE Alu 1 299 -14 2045 155 18 18 chr10 19239289 19239624 -121077141 - MER1B DNA MER1_type 0 337 3 890 224 17 0 chr10 19240603 19240782 -121075983 - L1PA12 LINE L1 -4 6164 5983 509 261 133 18 chr10 19240907 19241133 -121075632 - MIR SINE MIR -1 261 10 206 32 32 0 chr10 19241338 19241369 -121075396 + (TTTG)n Simple_repeat Simple_repeat 4 35 0 1927 122 37 0 chr10 19241369 19241639 -121075126 - AluSx SINE Alu -32 280 1 243 61 0 0 chr10 19241829 19241862 -121074903 + (TG)n Simple_repeat Simple_repeat 2 34 0 24 0 0 0 chr10 19242186 19242210 -121074555 + AT_rich Low_complexity Low_complexity 1 24 0 572 168 32 21 chr10 19242593 19242613 -121074152 + MER58A DNA MER1_type 30 48 -2372 2508 52 0 23 chr10 19242613 19242922 -121073843 - AluY SINE Alu -8 303 2 572 168 32 21 chr10 19242922 19243060 -121073705 + MER58A DNA MER1_type 48 224 0 291 345 65 52 chr10 19245228 19245518 -121071247 + L2 LINE L2 2976 3269 -3 202 239 43 0 chr10 19246120 19246166 -121070599 - L2 LINE L2 -20 3252 3205 21 0 0 0 chr10 19246212 19246233 -121070532 + AT_rich Low_complexity Low_complexity 1 21 0 649 263 143 0 chr10 19246848 19247072 -121069693 - MIR SINE MIR 0 262 7 215 276 17 0 chr10 19247472 19247530 -121069235 - L2 LINE L2 -1484 1830 1772 236 273 151 29 chr10 19247546 19247718 -121069047 - L2 LINE L2 -1744 1570 1378 * 1353 272 121 79 chr10 19247713 19249032 -121067733 + L2 LINE L2 1847 3222 -91 200 286 0 0 chr10 19249127 19249176 -121067589 + L2 LINE L2 3220 3268 -4 222 118 0 0 chr10 19250122 19250156 -121066609 + (TA)n Simple_repeat Simple_repeat 2 35 0 838 268 47 37 chr10 19251064 19251363 -121065402 + AluSp SINE Alu 2 303 0 647 103 0 0 chr10 19251949 19252036 -121064729 + L1PA5 LINE L1 10 96 -6365 * 39527 68 3 3 chr10 19252021 19257878 -121058887 + L1PA5 LINE L1 612 6469 0 27 0 0 0 chr10 19257878 19257905 -121058860 + AT_rich Low_complexity Low_complexity 1 27 0 604 313 50 5 chr10 19259025 19259238 -121057527 - MIR SINE MIR -6 256 36 1966 108 73 3 chr10 19259316 19259604 -121057161 - AluSx SINE Alu -4 308 1 760 221 53 33 chr10 19259708 19259936 -121056829 - MIR SINE MIR 0 262 38 1875 110 11 0 chr10 19260457 19260721 -121056044 - AluSx SINE Alu -4 308 42 220 309 0 0 chr10 19260767 19260822 -121055943 + L2 LINE L2 3206 3260 -12 1127 288 91 32 chr10 19260891 19261353 -121055412 - LTR16C LTR ERVL -2 489 1 2326 103 6 6 chr10 19261604 19261915 -121054850 + AluSx SINE Alu 1 311 -1 201 363 71 0 chr10 19262108 19262221 -121054544 + L2 LINE L2 3193 3313 0 330 307 243 30 chr10 19262922 19263165 -121053600 - L2 LINE L2 -1 3312 3122 1936 140 34 0 chr10 19263165 19263458 -121053307 + AluSx SINE Alu 1 303 -9 330 307 243 30 chr10 19263458 19263576 -121053189 - L2 LINE L2 -191 3122 2874 992 218 5 5 chr10 19263679 19263885 -121052880 - MER67C LTR ERV1 0 710 505 405 219 67 9 chr10 19263886 19263991 -121052774 - MER67C LTR ERV1 -374 336 226 348 24 0 0 chr10 19264088 19264129 -121052636 + (TG)n Simple_repeat Simple_repeat 2 42 0 1801 168 10 89 chr10 19264166 19264299 -121052466 - MLT2D LTR ERVL -48 366 224 1923 157 3 6 chr10 19264299 19264611 -121052154 + AluJo SINE Alu 1 311 -1 1801 168 10 89 chr10 19264611 19264869 -121051896 - MLT2D LTR ERVL -190 224 6 228 364 10 0 chr10 19264914 19265013 -121051752 - L2 LINE L2 -823 2491 2392 205 377 58 0 chr10 19265915 19266053 -121050712 + L2 LINE L2 2392 2537 -777 587 133 0 0 chr10 19266059 19266149 -121050616 + MLT2D LTR ERVL 6 95 -319 21 0 0 0 chr10 19266447 19266468 -121050297 + AT_rich Low_complexity Low_complexity 1 21 0 1821 169 10 7 chr10 19266981 19267276 -121049489 + AluJo SINE Alu 3 298 -14 31 0 0 0 chr10 19269424 19269455 -121047310 + AT_rich Low_complexity Low_complexity 1 31 0 416 299 33 65 chr10 19269524 19269708 -121047057 - MER5A DNA MER1_type -1 188 11 1513 199 29 0 chr10 19270099 19270380 -121046385 + AluJo SINE Alu 4 292 -20 199 194 81 0 chr10 19270739 19270801 -121045964 - MIR SINE MIR -3 259 193 2082 116 3 13 chr10 19270825 19271127 -121045638 - AluSx SINE Alu -1 311 13 215 322 76 25 chr10 19271544 19271662 -121045103 + L3 LINE CR1 1442 1565 -12 357 24 0 0 chr10 19272010 19272052 -121044713 + (A)n Simple_repeat Simple_repeat 1 42 0 2311 77 3 0 chr10 19272713 19273011 -121043754 - AluY SINE Alu -12 299 1 2121 121 0 0 chr10 19274756 19275066 -121041699 - AluSx SINE Alu 0 312 3 1887 131 0 58 chr10 19275712 19276025 -121040740 - AluJb SINE Alu -17 295 1 481 201 38 72 chr10 19276157 19276366 -121040399 + Charlie4 DNA MER1_type 1754 1955 -6 287 333 0 0 chr10 19276367 19276436 -121040329 - L2 LINE L2 -47 3225 3157 330 67 0 0 chr10 19276525 19276570 -121040195 + (TG)n Simple_repeat Simple_repeat 2 46 0 228 364 30 43 chr10 19276584 19276688 -121040077 - L2 LINE L2 -472 2842 2738 1058 181 5 11 chr10 19276688 19276876 -121039889 - L1MB3 LINE L1 0 6183 5997 228 364 30 43 chr10 19276876 19277002 -121039763 - L2 LINE L2 -576 2738 2615 744 273 74 25 chr10 19277004 19277371 -121039394 - L2 LINE L2 -839 2475 2091 2544 122 8 0 chr10 19277634 19277987 -121038778 - L1PA16 LINE L1 -9 6157 5802 24 32 0 0 chr10 19278156 19278187 -121038578 + AT_rich Low_complexity Low_complexity 1 31 0 2452 68 0 0 chr10 19278187 19278480 -121038285 - AluY SINE Alu -18 293 1 235 268 36 0 chr10 19279861 19279917 -121036848 - L2 LINE L2 -12 3301 3244 296 268 27 9 chr10 19280402 19280514 -121036251 - L1ME3A LINE L1 -3 6167 6054 32 0 0 0 chr10 19280554 19280586 -121036179 + AT_rich Low_complexity Low_complexity 1 32 0 1640 263 64 45 chr10 19280620 19281134 -121035631 - L1ME3A LINE L1 -153 6017 5487 2054 113 0 13 chr10 19281134 19281434 -121035331 - AluSx SINE Alu -15 297 2 1640 263 64 45 chr10 19281434 19281542 -121035223 - L1ME3A LINE L1 -683 5487 5383 728 280 138 58 chr10 19281543 19281827 -121034938 - L1ME3A LINE L1 -817 5329 5069 1831 176 0 0 chr10 19281827 19282142 -121034623 - AluSx SINE Alu 0 315 1 728 280 138 58 chr10 19282142 19282549 -121034216 - L1ME3A LINE L1 -1077 5069 4581 248 186 17 0 chr10 19282561 19282620 -121034145 + CT-rich Low_complexity Low_complexity 3 62 0 1877 135 7 11 chr10 19282624 19282898 -121033867 - AluSx SINE Alu -39 273 1 635 242 26 0 chr10 19282905 19283058 -121033707 - L1ME3A LINE L1 -1980 4166 4010 1711 184 7 3 chr10 19283066 19283371 -121033394 - AluJo SINE Alu -6 306 1 842 170 7 0 chr10 19284450 19284585 -121032180 + AluJo SINE Alu 1 136 -176 647 223 0 23 chr10 19285260 19285390 -121031375 - FLAM_A SINE Alu -6 127 1 2017 103 44 0 chr10 19285541 19285836 -121030929 - AluSx SINE Alu 0 307 1 213 39 0 0 chr10 19287268 19287294 -121029471 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 1399 129 0 0 chr10 19287311 19287504 -121029261 - AluSx SINE Alu -115 197 5 3743 145 14 47 chr10 19288473 19289106 -121027659 - LTR9 LTR ERV1 0 612 1 2234 113 0 25 chr10 19289253 19289573 -121027192 + AluSx SINE Alu 1 312 0 2085 121 13 0 chr10 19290242 19290548 -121026217 - AluSx SINE Alu -2 310 1 301 306 0 25 chr10 19290580 19290701 -121026064 - L1ME LINE L1 -305 5816 5699 373 333 44 39 chr10 19291383 19291563 -121025202 - L1ME LINE L1 -456 5665 5485 309 244 22 68 chr10 19292167 19292303 -121024462 + MER5B DNA MER1_type 29 164 -25 600 229 19 45 chr10 19292322 19292479 -121024286 + MER5B DNA MER1_type 1 153 -25 263 380 28 28 chr10 19292519 19292872 -121023893 - L2 LINE L2 -1879 1435 1083 201 267 143 19 chr10 19293068 19293173 -121023592 + MER5B DNA MER1_type 60 177 -1 820 225 6 0 chr10 19294155 19294324 -121022441 - AluJb SINE Alu -10 302 133 2789 72 3 53 chr10 19294542 19294916 -121021849 + THE1A LTR MaLR 1 355 0 317 271 33 66 chr10 19295422 19295544 -121021221 - L2 LINE L2 -5 3267 3150 36 0 0 0 chr10 19295855 19295891 -121020874 + AT_rich Low_complexity Low_complexity 1 36 0 36 97 0 0 chr10 19295939 19296052 -121020713 + AT_rich Low_complexity Low_complexity 1 113 0 1021 122 0 0 chr10 19296267 19296398 -121020367 + FLAM_C SINE Alu 1 131 -2 883 214 0 79 chr10 19296740 19296955 -121019810 + MER63A DNA MER1_type 2 199 -11 194 256 0 23 chr10 19297250 19297293 -121019472 - MIR SINE MIR -29 233 192 1492 166 9 116 chr10 19297398 19297539 -121019226 + AluJo SINE Alu 2 88 -214 2319 77 3 10 chr10 19297539 19297850 -121018915 + AluY SINE Alu 1 309 -2 1492 166 9 116 chr10 19297850 19298045 -121018720 + AluJo SINE Alu 88 302 0 195 341 47 54 chr10 19298092 19298221 -121018544 + L2 LINE L2 3186 3313 0 638 130 0 0 chr10 19298223 19298315 -121018450 + FRAM SINE Alu 16 107 -69 231 88 0 0 chr10 19298337 19298371 -121018394 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 198 327 0 0 chr10 19298766 19298821 -121017944 + L2 LINE L2 2762 2816 -498 630 223 37 78 chr10 19298848 19298962 -121017803 + MIR SINE MIR 38 139 -123 1613 174 3 43 chr10 19298962 19299261 -121017504 + AluJo SINE Alu 1 287 -25 630 223 37 78 chr10 19299261 19299365 -121017400 + MIR SINE MIR 139 246 -16 207 338 113 15 chr10 19299375 19299579 -121017186 + L2 LINE L2 2837 3060 -212 1827 160 3 3 chr10 19299901 19300183 -121016582 - AluSx SINE Alu -27 285 4 2046 113 13 7 chr10 19301280 19301581 -121015184 - AluSx SINE Alu -9 303 1 27 49 0 0 chr10 19301967 19302008 -121014757 + AT_rich Low_complexity Low_complexity 1 41 0 492 211 82 34 chr10 19302300 19302447 -121014318 + MER117 DNA MER1_type 1 154 -43 2131 106 0 3 chr10 19302678 19303014 -121013751 - AluSq SINE Alu 0 335 1 406 230 105 47 chr10 19303636 19303827 -121012938 - L2 LINE L2 0 3313 3112 394 362 49 21 chr10 19304052 19304240 -121012525 - MER5A DNA MER1_type 0 178 1 327 267 107 15 chr10 19304276 19304407 -121012358 + MIR SINE MIR 2 144 -118 2214 105 6 13 chr10 19304854 19305167 -121011598 + AluSq SINE Alu 3 313 0 252 0 0 0 chr10 19305777 19305805 -121010960 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 1620 134 111 4 chr10 19305815 19306077 -121010688 - AluJb SINE Alu -22 290 1 359 312 50 22 chr10 19306188 19306352 -121010413 - MIR SINE MIR -62 146 9 803 177 0 0 chr10 19306869 19306993 -121009772 + FLAM_C SINE Alu 2 125 -18 210 71 0 0 chr10 19307232 19307260 -121009505 + (TAA)n Simple_repeat Simple_repeat 3 30 0 256 301 86 11 chr10 19307261 19307354 -121009411 - MIR SINE MIR 0 262 163 22 35 0 0 chr10 19307482 19307511 -121009254 + AT_rich Low_complexity Low_complexity 1 29 0 764 218 0 8 chr10 19307702 19307835 -121008930 + FLAM_A SINE Alu 1 132 -1 2048 99 4 4 chr10 19309118 19309391 -121007374 + AluSx SINE Alu 1 273 -39 21 0 0 0 chr10 19309438 19309459 -121007306 + AT_rich Low_complexity Low_complexity 1 21 0 42588 39 0 3 chr10 19309915 19315015 -121001750 - L1PA3 LINE L1 -1062 5084 2 8092 24 0 0 chr10 19315017 19316055 -121000710 + L1PA3 LINE L1 5104 6141 -14 619 202 22 45 chr10 19316910 19317088 -120999677 - Charlie7 DNA MER1_type -1 2611 2438 288 324 20 0 chr10 19317079 19317181 -120999584 - Charlie7 DNA MER1_type -2507 105 2 * 326 272 48 16 chr10 19317290 19317415 -120999350 - L1MC4 LINE L1 -10 8032 7904 256 284 128 28 chr10 19317555 19317837 -120998928 - L1MC4 LINE L1 -227 7815 7506 259 319 140 41 chr10 19317903 19318195 -120998570 + MARNA DNA Mariner 12 332 -254 22 56 0 0 chr10 19320046 19320082 -120996683 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr10 19323300 19323328 -120993437 + AT_rich Low_complexity Low_complexity 1 28 0 364 219 50 106 chr10 19324080 19324201 -120992564 + Charlie8 DNA MER1_type 45 157 -184 2282 57 7 0 chr10 19324201 19324508 -120992257 + AluY SINE Alu 1 309 0 364 219 50 106 chr10 19324508 19324545 -120992220 + Charlie8 DNA MER1_type 157 195 -146 2248 93 3 0 chr10 19324645 19324934 -120991831 - AluSp SINE Alu -23 290 1 1243 187 137 20 chr10 19324938 19325281 -120991484 - MER31B LTR ERV1 -44 422 40 779 158 141 5 chr10 19325382 19325566 -120991199 + Charlie5 DNA MER1_type 32 240 -2372 339 244 0 12 chr10 19325566 19325648 -120991117 + Charlie5 DNA MER1_type 2505 2585 -27 756 235 6 6 chr10 19325692 19325858 -120990907 + MLT1E LTR MaLR 1 166 -427 1232 152 66 0 chr10 19325874 19326071 -120990694 + MLT1E LTR MaLR 377 586 -7 915 154 40 0 chr10 19326124 19326273 -120990492 + L1PA15 LINE L1 5992 6146 -19 2178 117 0 0 chr10 19326284 19326583 -120990182 + AluSx SINE Alu 1 299 -13 890 206 143 5 chr10 19326821 19327044 -120989721 + HERVL40 LTR ERVL 5277 5530 0 1486 249 83 9 chr10 19327045 19327491 -120989274 + LTR40a LTR ERVL 2 480 -39 249 187 80 27 chr10 19327753 19327798 -120988967 + MIR3 SINE MIR 105 157 -51 1953 130 3 54 chr10 19327798 19328148 -120988617 + AluSq SINE Alu 1 313 0 249 187 80 27 chr10 19328148 19328177 -120988588 + MIR3 SINE MIR 157 183 -25 190 339 0 0 chr10 19328212 19328274 -120988491 - L2 LINE L2 -1 3312 3251 * 620 236 191 0 chr10 19328242 19328441 -120988324 - MIR SINE MIR -25 237 1 183 310 95 26 chr10 19328452 19328568 -120988197 - L2 LINE L2 -6 3307 3184 338 221 74 0 chr10 19329271 19329366 -120987399 - LTR33 LTR ERVL -307 214 113 209 236 70 108 chr10 19330203 19330360 -120986405 + MER5A DNA MER1_type 39 189 0 2018 113 20 30 chr10 19330544 19330844 -120985921 - AluSx SINE Alu -15 297 1 196 221 44 59 chr10 19331120 19331188 -120985577 - L2 LINE L2 -3169 145 79 888 152 0 23 chr10 19331406 19331538 -120985227 - FLAM_A SINE Alu -4 129 1 3026 185 16 4 chr10 19332045 19332596 -120984169 + MER68 LTR ERV1 5 562 0 731 225 75 21 chr10 19332810 19333223 -120983542 + LTR54 LTR ERV1 1 495 -15 1407 170 9 0 chr10 19333223 19333452 -120983313 - AluJo SINE Alu -17 295 65 207 0 0 0 chr10 19333517 19333540 -120983225 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1483 161 25 49 chr10 19333544 19333829 -120982936 + AluJo SINE Alu 14 291 -21 2184 112 0 7 chr10 19333836 19334131 -120982634 + AluSq SINE Alu 3 295 -18 696 289 128 22 chr10 19334137 19334540 -120982225 - L2 LINE L2 -90 3223 2761 2158 115 3 0 chr10 19334721 19335009 -120981756 + AluSx SINE Alu 1 289 -23 913 163 62 0 chr10 19335122 19335282 -120981483 - AluSp SINE Alu -9 304 135 1559 166 4 4 chr10 19385681 19385928 -120930837 + AluSx SINE Alu 39 285 -27 256 227 93 0 chr10 19386464 19386539 -120930226 - MIR SINE MIR -16 246 165 1228 148 5 63 chr10 19386568 19386791 -120929974 - AluJo SINE Alu -25 287 78 1930 164 3 0 chr10 19387227 19387525 -120929240 + AluJo SINE Alu 1 299 -13 313 266 104 46 chr10 19387656 19387829 -120928936 + MIR SINE MIR 77 259 -3 214 155 52 0 chr10 19388191 19388249 -120928516 + GA-rich Low_complexity Low_complexity 5 65 0 1055 167 142 54 chr10 19388602 19388842 -120927923 + AluJo SINE Alu 39 299 -13 504 261 72 43 chr10 19389184 19389391 -120927374 + MIR SINE MIR 2 214 -48 251 314 83 0 chr10 19390114 19390235 -120926530 - L3 LINE CR1 -342 1235 1105 185 266 127 13 chr10 19390368 19390447 -120926318 - L3 LINE CR1 -972 605 518 532 87 22 0 chr10 19390457 19390549 -120926216 + (TA)n Simple_repeat Simple_repeat 2 95 0 1171 175 55 33 chr10 19390554 19390828 -120925937 - AluJo SINE Alu -22 290 11 2022 100 7 34 chr10 19391538 19391829 -120924936 - AluSg SINE Alu -24 286 4 278 328 25 25 chr10 19392655 19392777 -120923988 - MIR SINE MIR -121 141 20 2098 62 4 0 chr10 19392946 19393205 -120923560 + AluY SINE Alu 35 294 -17 2054 129 0 0 chr10 19394738 19395046 -120921719 - AluSx SINE Alu 0 312 5 1663 154 0 26 chr10 19395172 19395445 -120921320 - AluJb SINE Alu -36 276 11 2079 102 0 41 chr10 19395753 19396095 -120920670 - AluSq SINE Alu 0 330 1 1670 147 51 17 chr10 19396830 19397123 -120919642 + AluJo SINE Alu 1 303 -9 2120 122 3 0 chr10 19397146 19397441 -120919324 - AluSx SINE Alu -16 296 1 333 326 0 23 chr10 19397481 19397613 -120919152 - MIR SINE MIR -132 130 2 392 243 66 59 chr10 19398009 19398161 -120918604 - MIR SINE MIR -40 222 70 1306 168 15 27 chr10 19398161 19398423 -120918342 + AluJo SINE Alu 1 259 -53 1500 147 35 12 chr10 19398551 19398810 -120917955 - AluSx SINE Alu -37 275 11 513 359 24 9 chr10 19399181 19399393 -120917372 + MIR SINE MIR 41 255 -7 208 196 18 18 chr10 19399630 19399686 -120917079 + (TTATG)n Simple_repeat Simple_repeat 4 59 0 492 323 90 0 chr10 19400331 19400520 -120916245 - MIR SINE MIR 0 262 57 1894 39 0 13 chr10 19400530 19400763 -120916002 + AluY SINE Alu 81 310 -1 302 317 35 42 chr10 19401006 19401148 -120915617 - L1M LINE L1 -2412 5396 5256 2941 88 3 0 chr10 19401398 19401761 -120915004 - THE1B LTR MaLR 0 364 1 541 152 33 11 chr10 19402162 19402254 -120914511 + AluSx SINE Alu 2 95 -218 2046 113 13 7 chr10 19402691 19402992 -120913773 + AluSx SINE Alu 1 303 -9 2223 110 0 28 chr10 19404089 19404406 -120912359 + AluSx SINE Alu 4 311 -1 1609 90 42 0 chr10 19404559 19404771 -120911994 + AluSx SINE Alu 72 292 -20 24 32 0 0 chr10 19405201 19405232 -120911533 + AT_rich Low_complexity Low_complexity 1 31 0 326 24 0 0 chr10 19405232 19405273 -120911492 - MADE1 DNA Mariner 0 80 40 1091 120 20 0 chr10 19405273 19405423 -120911342 + AluSg/x SINE Alu 144 296 -16 48 88 0 0 chr10 19405478 19405603 -120911162 + AT_rich Low_complexity Low_complexity 1 125 0 2086 171 34 32 chr10 19406084 19406632 -120910133 - MLT2A2 LTR ERVL 0 554 1 31 0 0 0 chr10 19408884 19408915 -120907850 + AT_rich Low_complexity Low_complexity 1 31 0 416 299 33 65 chr10 19408984 19409168 -120907597 - MER5A DNA MER1_type -1 188 11 199 194 81 0 chr10 19409723 19409785 -120906980 - MIR SINE MIR -3 259 193 2065 114 3 13 chr10 19409809 19410107 -120906658 - AluSx SINE Alu -2 310 16 215 322 76 25 chr10 19410530 19410648 -120906117 + L3 LINE CR1 1442 1565 -12 204 111 0 0 chr10 19410983 19411019 -120905746 + (A)n Simple_repeat Simple_repeat 1 36 0 22 0 0 0 chr10 19411677 19411699 -120905066 + AT_rich Low_complexity Low_complexity 1 22 0 458 129 119 0 chr10 19411820 19411921 -120904844 - AluSp SINE Alu -200 113 1 758 200 131 0 chr10 19411922 19412097 -120904668 - L1PB4 LINE L1 -2 6154 5957 1726 198 0 0 chr10 19412273 19412608 -120904157 + AluJo SINE Alu 3 337 0 544 171 0 0 chr10 19412982 19413070 -120903695 - MLT2D LTR ERVL -321 93 6 228 364 10 0 chr10 19413115 19413214 -120903551 - L2 LINE L2 -823 2491 2392 205 377 58 0 chr10 19414116 19414254 -120902511 + L2 LINE L2 2392 2537 -777 587 133 0 0 chr10 19414260 19414350 -120902415 + MLT2D LTR ERVL 6 95 -319 21 0 0 0 chr10 19414647 19414668 -120902097 + AT_rich Low_complexity Low_complexity 1 21 0 1496 179 12 0 chr10 19415181 19415421 -120901344 + AluJo SINE Alu 3 245 -67 373 333 44 39 chr10 19415945 19416125 -120900640 + L1ME LINE L1 5485 5665 -456 301 306 0 25 chr10 19416807 19416928 -120899837 + L1ME LINE L1 5699 5816 -305 2085 121 13 0 chr10 19416960 19417266 -120899499 + AluSx SINE Alu 1 310 -2 3091 151 14 54 chr10 19417926 19418502 -120898263 + LTR9 LTR ERV1 60 612 0 1399 129 0 0 chr10 19419471 19419664 -120897101 + AluSx SINE Alu 5 197 -115 213 39 0 0 chr10 19419681 19419707 -120897058 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 1620 134 111 4 chr10 19420704 19420966 -120895799 + AluJb SINE Alu 1 290 -22 252 0 0 0 chr10 19420976 19421004 -120895761 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 2246 105 3 10 chr10 19421737 19422050 -120894715 - AluSq SINE Alu 0 313 3 362 265 103 7 chr10 19422494 19422630 -120894135 - MIR SINE MIR -112 150 2 416 353 48 27 chr10 19422666 19422854 -120893911 + MER5A DNA MER1_type 1 178 0 406 230 105 47 chr10 19423079 19423270 -120893495 + L2 LINE L2 3112 3313 0 2200 106 0 3 chr10 19423892 19424185 -120892580 + AluSq SINE Alu 1 292 -21 2069 166 30 91 chr10 19424536 19424855 -120891910 - MLT1C LTR MaLR 0 467 187 2058 118 38 3 chr10 19424855 19425144 -120891621 - AluSc SINE Alu -10 299 1 2069 166 30 91 chr10 19425144 19425318 -120891447 - MLT1C LTR MaLR -280 187 4 5129 198 67 77 chr10 19425322 19426704 -120890061 - MLT1C-int LTR MaLR -1 1370 2 2208 181 34 55 chr10 19426712 19427183 -120889582 - MLT1C LTR MaLR -6 461 1 2239 95 3 0 chr10 19427206 19427491 -120889274 + AluSg SINE Alu 1 286 -24 933 219 26 63 chr10 19427655 19427925 -120888840 + Charlie4 DNA MER1_type 35 294 -1667 1874 133 0 63 chr10 19427939 19428256 -120888509 - AluJb SINE Alu -15 297 1 467 203 30 79 chr10 19428388 19428590 -120888175 + Charlie4 DNA MER1_type 1754 1945 -16 23 33 0 0 chr10 19429227 19429257 -120887508 + AT_rich Low_complexity Low_complexity 1 30 0 2123 83 31 24 chr10 19429556 19429846 -120886919 + AluY SINE Alu 2 293 -18 4604 188 41 72 chr10 19430659 19432814 -120883951 - L1MB4 LINE L1 -10 6406 4332 355 267 156 44 chr10 19432821 19433046 -120883719 - L1MB4 LINE L1 -6022 362 113 1979 170 14 24 chr10 19433046 19433244 -120883521 + MER47A DNA MER2_type 1 195 -2128 3313 171 54 84 chr10 19433244 19434053 -120882712 - LTR1 LTR ERV1 0 785 1 1979 170 14 24 chr10 19434053 19434224 -120882541 + MER47A DNA MER2_type 195 366 0 299 317 0 10 chr10 19434225 19434326 -120882439 - L1MB4 LINE L1 -6271 113 14 2231 106 0 0 chr10 19434526 19434819 -120881946 + AluSx SINE Alu 1 293 -19 22 0 0 0 chr10 19435248 19435270 -120881495 + AT_rich Low_complexity Low_complexity 1 22 0 517 88 0 12 chr10 19435522 19435602 -120881163 - Alu SINE Alu 0 311 233 203 295 133 9 chr10 19435837 19435942 -120880823 + MER5B DNA MER1_type 60 177 -1 841 222 6 0 chr10 19436921 19437092 -120879673 - AluJb SINE Alu -8 304 133 2776 75 3 53 chr10 19437310 19437684 -120879081 + THE1A LTR MaLR 1 355 0 317 271 33 66 chr10 19438191 19438313 -120878452 - L2 LINE L2 -5 3267 3150 36 0 0 0 chr10 19438624 19438660 -120878105 + AT_rich Low_complexity Low_complexity 1 36 0 36 97 0 0 chr10 19438709 19438822 -120877943 + AT_rich Low_complexity Low_complexity 1 113 0 1021 122 0 0 chr10 19439037 19439168 -120877597 + FLAM_C SINE Alu 1 131 -2 883 214 0 79 chr10 19439510 19439725 -120877040 + MER63A DNA MER1_type 2 199 -11 194 256 0 23 chr10 19440020 19440063 -120876702 - MIR SINE MIR -29 233 192 1492 166 9 116 chr10 19440168 19440309 -120876456 + AluJo SINE Alu 2 88 -214 2302 80 3 13 chr10 19440309 19440621 -120876144 + AluY SINE Alu 1 309 -2 1492 166 9 116 chr10 19440621 19440816 -120875949 + AluJo SINE Alu 88 302 0 195 341 47 54 chr10 19440863 19440992 -120875773 + L2 LINE L2 3186 3313 0 638 130 0 0 chr10 19440994 19441086 -120875679 + FRAM SINE Alu 16 107 -69 231 88 0 0 chr10 19441108 19441142 -120875623 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 198 327 0 0 chr10 19441537 19441592 -120875173 + L2 LINE L2 2762 2816 -498 482 239 1 11 chr10 19441619 19441735 -120875030 + MIR SINE MIR 38 151 -62 281 174 0 82 chr10 19441735 19441833 -120874932 + AluJ/FLAM SINE Alu 1 90 -212 226 259 28 25 chr10 19441889 19442213 -120874552 + CT-rich Low_complexity Low_complexity 1 325 0 282 249 23 39 chr10 19442225 19442450 -120874315 + CT-rich Low_complexity Low_complexity 1 221 0 24 0 0 0 chr10 19442658 19442682 -120874083 + AT_rich Low_complexity Low_complexity 1 24 0 243 61 0 0 chr10 19443003 19443036 -120873729 + (CA)n Simple_repeat Simple_repeat 2 34 0 1892 122 37 4 chr10 19443226 19443497 -120873268 + AluSx SINE Alu 1 280 -32 206 32 32 0 chr10 19443497 19443528 -120873237 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 509 261 133 18 chr10 19443733 19443959 -120872806 + MIR SINE MIR 10 261 -1 905 218 17 0 chr10 19444084 19444263 -120872502 + L1PA12 LINE L1 5983 6164 -4 2074 148 18 24 chr10 19445243 19445580 -120871185 + MER1B DNA MER1_type 3 337 0 1832 93 4 12 chr10 19445767 19446024 -120870741 - AluSq SINE Alu -14 299 45 842 170 7 0 chr10 19447199 19447334 -120869431 - AluJo SINE Alu -176 136 1 1711 184 7 3 chr10 19448413 19448718 -120868047 + AluJo SINE Alu 1 306 -6 635 242 26 0 chr10 19448726 19448879 -120867886 + L1ME3A LINE L1 4010 4166 -1980 1877 135 7 11 chr10 19448886 19449160 -120867605 + AluSx SINE Alu 1 273 -39 263 161 18 0 chr10 19449160 19449216 -120867549 + GA-rich Low_complexity Low_complexity 1 57 0 716 281 139 55 chr10 19449237 19449646 -120867119 + L1ME3A LINE L1 4581 4954 -1192 1810 180 0 0 chr10 19449646 19449969 -120866796 + AluSx SINE Alu 1 323 0 716 281 139 55 chr10 19449969 19450249 -120866516 + L1ME3A LINE L1 4954 5329 -817 1643 263 64 45 chr10 19450250 19450358 -120866407 + L1ME3A LINE L1 5383 5487 -683 1993 116 0 17 chr10 19450358 19450659 -120866106 + AluSx SINE Alu 2 297 -15 1643 263 64 45 chr10 19450659 19451173 -120865592 + L1ME3A LINE L1 5487 6017 -153 32 0 0 0 chr10 19451207 19451239 -120865526 + AT_rich Low_complexity Low_complexity 1 32 0 296 268 27 9 chr10 19451279 19451391 -120865374 + L1ME3A LINE L1 6054 6167 -3 235 268 36 0 chr10 19451876 19451932 -120864833 + L2 LINE L2 3244 3301 -12 2391 75 0 3 chr10 19453315 19453609 -120863156 + AluY SINE Alu 1 293 -18 24 32 0 0 chr10 19453609 19453640 -120863125 + AT_rich Low_complexity Low_complexity 1 31 0 2501 128 8 0 chr10 19453809 19454162 -120862603 + L1PA16 LINE L1 5802 6157 -9 759 270 74 25 chr10 19454425 19454792 -120861973 + L2 LINE L2 2091 2475 -839 218 368 33 41 chr10 19454794 19454920 -120861845 + L2 LINE L2 2615 2740 -574 1058 181 5 11 chr10 19454920 19455108 -120861657 + L1MB3 LINE L1 5997 6183 0 218 368 33 41 chr10 19455108 19455223 -120861542 + L2 LINE L2 2740 2854 -460 1655 153 0 0 chr10 19455348 19455589 -120861176 - AluSx SINE Alu -71 241 1 214 198 18 63 chr10 19456101 19456212 -120860553 + CT-rich Low_complexity Low_complexity 4 109 0 191 86 57 0 chr10 19457054 19457089 -120859676 - L3 LINE CR1 -173 1404 1368 180 286 20 61 chr10 19457066 19457164 -120859601 - L3b LINE CR1 -193 1390 1297 * 923 252 5 5 chr10 19457532 19457742 -120859023 + MIR SINE MIR 51 260 -2 858 226 62 25 chr10 19457776 19457801 -120858964 - MER33 DNA MER1_type -2333 252 229 2160 131 0 0 chr10 19457801 19458099 -120858666 - AluSx SINE Alu -14 298 1 858 226 62 25 chr10 19458099 19458316 -120858449 - MER33 DNA MER1_type -2356 229 1 1403 164 13 88 chr10 19458575 19458892 -120857873 - AluJb SINE Alu -19 293 1 656 190 22 99 chr10 19459393 19459574 -120857191 + MER63B DNA MER1_type 2 195 -1493 2313 97 0 3 chr10 19459574 19459874 -120856891 - AluSg SINE Alu -11 299 1 656 190 22 99 chr10 19459874 19459896 -120856869 + MER63B DNA MER1_type 195 1035 -27 304 312 50 21 chr10 19460036 19460177 -120856588 - MIR3 SINE MIR -6 202 58 304 169 0 17 chr10 19460644 19460703 -120856062 - L1MC4 LINE L1 -1337 6705 6648 2072 145 0 3 chr10 19460704 19461000 -120855765 - AluJb SINE Alu -17 295 1 577 318 50 5 chr10 19461388 19461601 -120855164 - MIR SINE MIR -6 256 36 1951 103 72 7 chr10 19461679 19461969 -120854796 - AluSx SINE Alu -3 309 1 760 221 53 33 chr10 19462073 19462301 -120854464 - MIR SINE MIR 0 262 38 1819 118 11 0 chr10 19462822 19463085 -120853680 - AluSx SINE Alu -5 307 42 220 309 0 0 chr10 19463131 19463186 -120853579 + L2 LINE L2 3206 3260 -12 1127 288 91 32 chr10 19463255 19463717 -120853048 - LTR16C LTR ERVL -2 489 1 2317 103 7 7 chr10 19463968 19464278 -120852487 + AluSx SINE Alu 1 310 -2 201 363 71 0 chr10 19464471 19464584 -120852181 + L2 LINE L2 3193 3313 0 376 302 223 30 chr10 19465285 19465528 -120851237 - L2 LINE L2 -1 3312 3117 1907 132 35 3 chr10 19465528 19465816 -120850949 + AluSx SINE Alu 1 297 -15 376 302 223 30 chr10 19465816 19465940 -120850825 - L2 LINE L2 -196 3117 2874 1008 214 5 5 chr10 19466043 19466249 -120850516 - MER67C LTR ERV1 0 710 505 405 219 67 9 chr10 19466250 19466355 -120850410 - MER67C LTR ERV1 -374 336 226 240 35 0 0 chr10 19466452 19466481 -120850284 + (TG)n Simple_repeat Simple_repeat 2 30 0 1261 193 11 108 chr10 19466518 19466651 -120850114 - MLT2D LTR ERVL -48 366 222 1994 153 0 6 chr10 19466651 19466964 -120849801 + AluJo SINE Alu 1 311 -1 1261 193 11 108 chr10 19466964 19467192 -120849573 - MLT2D LTR ERVL -192 222 40 803 177 0 0 chr10 19467995 19468119 -120848646 + FLAM_C SINE Alu 2 125 -18 210 71 0 0 chr10 19468359 19468387 -120848378 + (TAA)n Simple_repeat Simple_repeat 3 30 0 256 301 86 11 chr10 19468388 19468481 -120848284 - MIR SINE MIR 0 262 163 22 35 0 0 chr10 19468609 19468638 -120848127 + AT_rich Low_complexity Low_complexity 1 29 0 764 218 0 8 chr10 19468806 19468939 -120847826 + FLAM_A SINE Alu 1 132 -1 2153 107 0 23 chr10 19469056 19469364 -120847401 + AluSx SINE Alu 1 301 -11 200 314 14 0 chr10 19469747 19469817 -120846948 + MIR SINE MIR 96 166 -96 265 279 0 0 chr10 19471037 19471105 -120845660 + MER117 DNA MER1_type 107 174 -23 1886 167 0 3 chr10 19471231 19471542 -120845223 - AluSx SINE Alu -1 311 2 2226 99 10 7 chr10 19472666 19472960 -120843805 + AluSg1 SINE Alu 1 295 -14 199 238 95 76 chr10 19473096 19473201 -120843564 - MIR SINE MIR -90 172 66 2219 105 3 7 chr10 19473496 19473800 -120842965 - AluSx SINE Alu -9 303 1 2159 143 8 37 chr10 19473839 19474216 -120842549 - L1PA16 LINE L1 0 6166 5801 198 260 187 24 chr10 19474943 19475066 -120841699 - MIR SINE MIR -78 184 42 2097 132 7 0 chr10 19475193 19475488 -120841277 - AluSx SINE Alu -15 297 1 653 241 91 74 chr10 19475881 19476288 -120840477 - L1MC4a LINE L1 -131 5990 5577 181 279 49 0 chr10 19476550 19476611 -120840154 + MIR SINE MIR 84 147 -115 239 167 0 21 chr10 19476938 19476986 -120839779 + Charlie5 DNA MER1_type 18 64 -2548 204 125 0 0 chr10 19477188 19477220 -120839545 + (T)n Simple_repeat Simple_repeat 1 32 0 205 250 39 0 chr10 19477656 19477708 -120839057 - L2 LINE L2 -29 3243 3190 190 206 122 10 chr10 19477989 19478072 -120838693 - MIR SINE MIR -99 109 14 959 189 0 17 chr10 19478435 19478615 -120838150 + AluJb SINE Alu 135 311 -1 25 83 0 0 chr10 19478779 19478839 -120837926 + AT_rich Low_complexity Low_complexity 1 60 0 857 138 0 15 chr10 19479606 19479736 -120837029 + FLAM_C SINE Alu 1 128 -5 223 167 48 0 chr10 19479957 19479999 -120836766 + L3b LINE CR1 1290 1333 -250 33 56 0 0 chr10 19480568 19480622 -120836143 + AT_rich Low_complexity Low_complexity 1 54 0 294 29 0 0 chr10 19482858 19482893 -120833872 + (TG)n Simple_repeat Simple_repeat 2 36 0 249 291 53 53 chr10 19483163 19483233 -120833532 + MIR SINE MIR 111 180 -82 1706 166 59 3 chr10 19483233 19483541 -120833224 - AluJb SINE Alu 0 312 1 249 291 53 53 chr10 19483541 19483621 -120833144 + MIR SINE MIR 179 261 -1 210 246 0 18 chr10 19483622 19483679 -120833086 + (TTG)n Simple_repeat Simple_repeat 3 58 0 2142 109 0 7 chr10 19483973 19484280 -120832485 - AluSq SINE Alu 0 305 1 230 305 69 38 chr10 19484316 19484447 -120832318 - L2 LINE L2 -1692 1622 1488 2610 52 0 3 chr10 19484579 19484888 -120831877 + AluY SINE Alu 1 308 -3 2314 96 0 3 chr10 19485177 19485480 -120831285 + AluSx SINE Alu 1 302 -10 267 358 128 0 chr10 19486450 19486598 -120830167 - MIR3 SINE MIR -7 201 35 245 238 0 0 chr10 19486872 19486935 -120829830 - MIR SINE MIR -108 154 92 586 293 30 79 chr10 19486978 19487244 -120829521 + L1MEd LINE L1 369 621 -5498 360 271 24 65 chr10 19487428 19487675 -120829090 - L1MEc LINE L1 -4735 1575 1339 2133 141 0 0 chr10 19487784 19488075 -120828690 - AluSg SINE Alu -18 292 2 241 279 85 111 chr10 19488161 19488621 -120828144 - L1MEc LINE L1 -4962 1157 687 1811 171 0 0 chr10 19488621 19488908 -120827857 - AluSx SINE Alu -25 287 1 241 279 85 111 chr10 19488908 19489559 -120827206 - L1MEc LINE L1 -5432 687 73 1807 162 3 23 chr10 19489559 19489868 -120826897 - AluJb SINE Alu -9 303 1 241 279 85 111 chr10 19489868 19489894 -120826871 - L1MEc LINE L1 -6046 73 48 30 21 0 21 chr10 19490297 19490318 -120826447 + AT_rich Low_complexity Low_complexity 1 21 -26 2140 111 0 10 chr10 19490318 19490607 -120826158 + AluSq SINE Alu 1 286 -27 30 21 0 21 chr10 19490607 19490633 -120826132 + AT_rich Low_complexity Low_complexity 21 47 0 217 233 0 0 chr10 19493100 19493143 -120823622 + CT-rich Low_complexity Low_complexity 2 44 0 2095 135 0 0 chr10 19493291 19493587 -120823178 - AluSx SINE Alu -10 302 7 207 286 50 79 chr10 19493734 19493837 -120822928 - MIR SINE MIR -29 233 134 2264 116 7 0 chr10 19493837 19494139 -120822626 + AluSq SINE Alu 1 304 -9 207 286 50 79 chr10 19494139 19494175 -120822590 - MIR SINE MIR -128 134 98 240 289 72 0 chr10 19495345 19495428 -120821337 - MIR SINE MIR -87 175 87 255 170 0 0 chr10 19495557 19495604 -120821161 + GA-rich Low_complexity Low_complexity 1 47 0 182 253 172 92 chr10 19496140 19496227 -120820538 - MER5B DNA MER1_type -50 128 35 512 211 11 22 chr10 19496353 19496533 -120820232 + CT-rich Low_complexity Low_complexity 1 178 0 846 126 6 33 chr10 19496548 19496730 -120820035 + (TTC)n Simple_repeat Simple_repeat 2 178 0 1411 207 25 22 chr10 19496739 19497014 -120819751 - AluJo SINE Alu -36 276 1 216 191 0 0 chr10 19497336 19497383 -120819382 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1626 136 56 70 chr10 19497486 19497860 -120818905 - THE1C LTR MaLR 0 375 7 186 360 0 0 chr10 19502740 19502790 -120813975 - MIR SINE MIR -193 69 20 1977 205 42 36 chr10 19503375 19503873 -120812892 - MLT1D LTR MaLR 0 505 5 190 300 80 20 chr10 19503948 19504048 -120812717 - L3 LINE CR1 -146 1431 1326 5159 100 4 4 chr10 19504562 19505331 -120811434 - L1PB1 LINE L1 -1 6150 5382 2269 123 0 0 chr10 19505539 19505840 -120810925 - AluSx SINE Alu -11 301 1 21 0 0 0 chr10 19505989 19506010 -120810755 + AT_rich Low_complexity Low_complexity 1 21 0 187 120 20 20 chr10 19506359 19506409 -120810356 + (TA)n Simple_repeat Simple_repeat 1 50 0 379 160 77 13 chr10 19506516 19506672 -120810093 + (TA)n Simple_repeat Simple_repeat 2 167 0 367 140 0 35 chr10 19506672 19506753 -120810012 - FLAM_A SINE Alu -70 62 10 21 36 0 0 chr10 19506811 19506839 -120809926 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 19507569 19507591 -120809174 + AT_rich Low_complexity Low_complexity 1 22 0 1007 169 6 0 chr10 19507956 19508116 -120808649 - FRAM SINE Alu -12 164 4 253 247 0 67 chr10 19508177 19508266 -120808499 + MIR3 SINE MIR 125 207 -1 1957 123 3 30 chr10 19508653 19508955 -120807810 - AluSq SINE Alu -19 294 1 284 297 101 27 chr10 19509401 19509549 -120807216 + MIR SINE MIR 103 261 -1 24 53 0 0 chr10 19509736 19509774 -120806991 + AT_rich Low_complexity Low_complexity 1 38 0 316 253 117 93 chr10 19510638 19510800 -120805965 - MIR SINE MIR -60 202 37 1311 150 137 82 chr10 19510963 19511256 -120805509 - AluJo SINE Alu -3 309 1 297 326 257 17 chr10 19511416 19511824 -120804941 + L3 LINE CR1 1070 1575 -2 1812 180 0 3 chr10 19512426 19512710 -120804055 - AluJo SINE Alu -19 293 11 1611 190 0 7 chr10 19513275 19513559 -120803206 - AluJo SINE Alu -30 282 1 2160 130 38 19 chr10 19513716 19514084 -120802681 - THE1C LTR MaLR 0 375 1 268 318 109 18 chr10 19514194 19514304 -120802461 - MER91A DNA MER1_type 0 196 77 191 111 0 22 chr10 19515103 19515148 -120801617 + (CAT)n Simple_repeat Simple_repeat 2 45 0 182 289 0 0 chr10 19515149 19515194 -120801571 - MIR SINE MIR -6 256 212 525 104 0 0 chr10 19515570 19515647 -120801118 + (TTCC)n Simple_repeat Simple_repeat 4 80 0 201 226 0 0 chr10 19515639 19515692 -120801073 + C-rich Low_complexity Low_complexity 6 58 0 * 1992 111 4 0 chr10 19515725 19515987 -120800778 - AluSq SINE Alu -46 267 5 414 195 0 0 chr10 19516364 19516446 -120800319 + MER41A LTR ERV1 387 468 -86 1647 65 0 9 chr10 19516463 19516717 -120800048 + AluY SINE Alu 67 318 0 2143 118 3 10 chr10 19517088 19517392 -120799373 - AluSg SINE Alu -7 303 2 2141 248 20 11 chr10 19517839 19518473 -120798292 - L1MCa LINE L1 -3276 3150 2511 5019 217 92 75 chr10 19518479 19518717 -120798048 - L1MCa LINE L1 -3951 2475 2243 800 159 0 36 chr10 19518717 19518855 -120797910 - FLAM_C SINE Alu 0 133 1 5019 217 92 75 chr10 19518855 19520048 -120796717 - L1MCa LINE L1 -4183 2243 984 3580 128 2 24 chr10 19520048 19520421 -120796344 + MER1A DNA MER1_type 1 361 -2339 2288 64 0 0 chr10 19520421 19520753 -120796012 - AluY SINE Alu 0 334 3 3580 128 2 24 chr10 19520753 19520917 -120795848 + MER1A DNA MER1_type 361 527 0 5019 217 92 75 chr10 19520917 19521917 -120794848 - L1MCa LINE L1 -5442 984 2 2356 87 0 3 chr10 19522019 19522318 -120794447 + AluSc SINE Alu 1 298 -11 273 119 0 0 chr10 19522427 19522469 -120794296 + (TTCC)n Simple_repeat Simple_repeat 1 42 0 1846 158 0 4 chr10 19522469 19522748 -120794017 - AluJo SINE Alu -34 278 1 759 127 67 40 chr10 19523660 19523682 -120793083 - L1PA8 LINE L1 0 6172 6152 2354 110 3 0 chr10 19523682 19523992 -120792773 - AluSx SINE Alu -1 311 1 204 40 0 0 chr10 19523996 19524021 -120792744 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 759 127 67 40 chr10 19524021 19524143 -120792622 - L1PA8 LINE L1 -22 6150 6019 1486 167 3 123 chr10 19524184 19524549 -120792216 + AluJb SINE Alu 1 324 0 1606 124 295 3 chr10 19525015 19525361 -120791404 - MER66A LTR ERV1 -5 473 27 722 184 0 0 chr10 19525944 19526058 -120790707 + FLAM_C SINE Alu 3 116 -27 276 100 0 0 chr10 19526058 19526098 -120790667 + (TAAAA)n Simple_repeat Simple_repeat 1 40 0 1294 210 59 16 chr10 19526223 19526528 -120790237 - MER58B DNA MER1_type -22 319 2 194 279 15 59 chr10 19527634 19527702 -120789063 - L2 LINE L2 -20 3293 3229 2246 91 10 3 chr10 19529111 19529420 -120787345 + AluSq SINE Alu 1 311 -2 29 60 0 0 chr10 19529685 19529735 -120787030 + AT_rich Low_complexity Low_complexity 1 50 0 2293 95 0 0 chr10 19530702 19530998 -120785767 + AluSq SINE Alu 1 296 -17 21 36 0 0 chr10 19531515 19531543 -120785222 + AT_rich Low_complexity Low_complexity 1 28 0 516 61 0 0 chr10 19532098 19532164 -120784601 + U4 snRNA snRNA 1 66 -79 1518 217 18 39 chr10 19532168 19532680 -120784085 - L1M4c LINE L1 -3643 3001 2556 2195 141 0 0 chr10 19532680 19532992 -120783773 - AluSx SINE Alu 0 312 1 1518 217 18 39 chr10 19532992 19533069 -120783696 - L1M4c LINE L1 -4088 2556 2479 1262 127 0 0 chr10 19533099 19533265 -120783500 + AluSg/x SINE Alu 130 295 -17 825 281 103 20 chr10 19533309 19533878 -120782887 - L1M4c LINE L1 -4406 2419 1675 3183 246 15 36 chr10 19533893 19534756 -120782009 - L1M4c LINE L1 -5697 845 1 685 277 66 16 chr10 19535036 19535278 -120781487 + MIR SINE MIR 9 262 0 1528 108 0 19 chr10 19537569 19537783 -120778982 - AluSc SINE Alu -8 301 92 2225 113 3 0 chr10 19537855 19538166 -120778599 - AluSx SINE Alu 0 312 1 206 136 23 0 chr10 19538384 19538428 -120778337 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 24 0 0 0 chr10 19538572 19538596 -120778169 + AT_rich Low_complexity Low_complexity 1 24 0 239 218 23 35 chr10 19539136 19539223 -120777542 + T-rich Low_complexity Low_complexity 1 86 0 2261 113 33 33 chr10 19540827 19541191 -120775574 - THE1B LTR MaLR 0 364 1 2413 97 0 0 chr10 19541497 19541808 -120774957 + AluSq SINE Alu 1 311 -2 207 0 0 0 chr10 19542011 19542034 -120774731 + (CTAG)n Simple_repeat Simple_repeat 1 23 0 273 274 87 58 chr10 19542642 19542850 -120773915 - L2 LINE L2 0 3313 3100 698 214 127 0 chr10 19542868 19542933 -120773832 - MER69 DNA AcHobo 0 2526 2471 1798 157 3 29 chr10 19542933 19543246 -120773519 + AluJo SINE Alu 1 305 -7 698 214 127 0 chr10 19543246 19543391 -120773374 - MER69 DNA AcHobo -55 2471 2288 451 127 0 0 chr10 19543391 19543462 -120773303 - MLT1B LTR MaLR -2 388 318 404 272 11 43 chr10 19543495 19543679 -120773086 + (TATG)n Simple_repeat Simple_repeat 3 180 0 322 273 16 49 chr10 19543705 19543888 -120772877 + (TATATG)n Simple_repeat Simple_repeat 2 178 0 268 208 13 52 chr10 19543923 19544077 -120772688 + (TATG)n Simple_repeat Simple_repeat 2 149 0 299 257 28 28 chr10 19544079 19544188 -120772577 + (TATATG)n Simple_repeat Simple_repeat 4 112 0 226 194 14 69 chr10 19544202 19544346 -120772419 + (TATG)n Simple_repeat Simple_repeat 2 137 0 1633 198 92 9 chr10 19544355 19544693 -120772072 - MLT2D LTR ERVL -48 366 1 1620 220 79 90 chr10 19544693 19545488 -120771277 - MER69 DNA AcHobo -283 2243 1458 559 299 11 75 chr10 19545622 19545665 -120771100 - MER69 DNA AcHobo -593 633 589 1728 89 8 8 chr10 19545665 19545901 -120770864 - AluSq SINE Alu -2 311 76 559 299 11 75 chr10 19545901 19546138 -120770627 - MER69 DNA AcHobo -637 589 371 516 258 69 44 chr10 19546154 19546201 -120770564 + MLT2C1 LTR ERVL 17 61 -353 656 207 7 28 chr10 19546201 19546346 -120770419 + MLT1E3 LTR MaLR 81 222 -402 516 258 69 44 chr10 19546346 19546387 -120770378 + MLT2C1 LTR ERVL 61 254 -160 204 40 0 0 chr10 19546425 19546450 -120770315 + (TCCCC)n Simple_repeat Simple_repeat 1 25 0 184 137 39 20 chr10 19546450 19546501 -120770264 + CT-rich Low_complexity Low_complexity 3 54 0 1692 203 0 3 chr10 19546507 19546817 -120769948 - AluJo SINE Alu -3 309 1 245 216 0 94 chr10 19546830 19546934 -120769831 + MLT2C1 LTR ERVL 287 480 -40 225 0 0 0 chr10 19547039 19547064 -120769701 + (TA)n Simple_repeat Simple_repeat 1 25 0 2346 84 0 3 chr10 19547064 19547360 -120769405 - AluSq SINE Alu -18 295 1 1266 165 57 70 chr10 19547380 19547696 -120769069 - MER69 DNA AcHobo -2206 320 9 2312 105 96 0 chr10 19548118 19548450 -120768315 + THE1B LTR MaLR 1 364 0 3249 172 25 73 chr10 19548816 19549542 -120767223 + LTR8 LTR ERV1 1 691 0 240 128 149 0 chr10 19549542 19549589 -120767176 + MER5B DNA MER1_type 79 132 -46 839 210 118 105 chr10 19549654 19550044 -120766721 + MSTD LTR MaLR 2 396 0 369 237 1 23 chr10 19550328 19550420 -120766345 + MSTC LTR MaLR 15 106 -268 21 0 0 0 chr10 19550526 19550547 -120766218 + AT_rich Low_complexity Low_complexity 1 21 0 497 290 16 32 chr10 19551101 19551287 -120765478 - MER5A DNA MER1_type 0 189 7 2990 144 32 22 chr10 19551766 19552259 -120764506 + MER41E LTR ERV1 15 512 0 225 0 0 0 chr10 19552863 19552888 -120763877 + (A)n Simple_repeat Simple_repeat 1 25 0 1119 295 189 18 chr10 19555223 19556156 -120760609 + L2 LINE L2 2207 3303 -10 327 233 83 93 chr10 19556237 19556430 -120760335 - L2 LINE L2 -1257 2057 1867 271 283 66 19 chr10 19556647 19556753 -120760012 + MER5B DNA MER1_type 68 178 0 3759 172 28 31 chr10 19556961 19557308 -120759457 - L1MB3 LINE L1 0 6183 5837 2030 101 74 20 chr10 19557308 19557605 -120759160 - AluSp SINE Alu 0 313 1 3759 172 28 31 chr10 19557605 19558032 -120758733 - L1MB3 LINE L1 -346 5837 5411 2465 86 0 0 chr10 19558189 19558490 -120758275 + AluSc SINE Alu 1 301 -8 2976 153 63 18 chr10 19558610 19558657 -120758108 + LTR49 LTR ERV1 1 44 -551 613 100 0 0 chr10 19558657 19558737 -120758028 - MADE1 DNA Mariner 0 80 1 2976 153 63 18 chr10 19558737 19559207 -120757558 + LTR49 LTR ERV1 44 549 -46 207 0 0 0 chr10 19559207 19559230 -120757535 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2976 153 63 18 chr10 19559230 19559280 -120757485 + LTR49 LTR ERV1 549 595 0 360 302 129 5 chr10 19559496 19559698 -120757067 - MIR SINE MIR -30 232 6 1946 101 22 53 chr10 19559887 19560205 -120756560 - AluSg SINE Alu -2 308 1 1971 146 10 3 chr10 19560258 19560560 -120756205 - AluSx SINE Alu -8 304 1 2182 184 35 79 chr10 19560841 19561323 -120755442 + MLT2B1 LTR ERVL 1 458 -62 2029 148 0 0 chr10 19561323 19561626 -120755139 + AluSx SINE Alu 1 303 -9 2182 184 35 79 chr10 19561626 19561687 -120755078 + MLT2B1 LTR ERVL 458 520 0 291 269 177 39 chr10 19562347 19562477 -120754288 + L2 LINE L2 3100 3247 -25 591 233 89 35 chr10 19562527 19562571 -120754194 - MIR SINE MIR -19 243 203 2066 128 7 0 chr10 19562571 19562868 -120753897 - AluSx SINE Alu -13 299 1 591 233 89 35 chr10 19562868 19563025 -120753740 - MIR SINE MIR -59 203 31 333 274 26 13 chr10 19563489 19563642 -120753123 + (TA)n Simple_repeat Simple_repeat 1 155 0 1644 189 4 4 chr10 19563743 19564024 -120752741 - AluJo SINE Alu -31 281 1 2693 26 0 3 chr10 19564294 19564598 -120752167 + AluY SINE Alu 1 303 -8 233 208 239 31 chr10 19564601 19564760 -120752005 - HAL1 LINE L1 -296 2211 2020 1188 231 224 12 chr10 19564890 19565376 -120751389 - HAL1 LINE L1 -928 1579 991 333 322 55 27 chr10 19565503 19565649 -120751116 - HAL1 LINE L1 -2011 496 347 322 237 237 35 chr10 19565650 19565764 -120751001 - MER63A DNA MER1_type -1 209 73 231 268 129 56 chr10 19565850 19566137 -120750628 - HAL1 LINE L1 -2152 355 48 370 262 177 18 chr10 19566323 19566487 -120750278 - MIR SINE MIR -16 246 57 1881 106 101 53 chr10 19566854 19567212 -120749553 - THE1C LTR MaLR 0 375 1 1372 202 34 81 chr10 19567303 19567759 -120749006 + MLT2B1 LTR ERVL 1 414 0 259 278 69 0 chr10 19567795 19567867 -120748898 - MER91C DNA MER1_type -30 110 34 429 347 47 0 chr10 19568318 19568468 -120748297 - L2 LINE L2 0 3272 3116 220 321 212 52 chr10 19570157 19570525 -120746240 - L2 LINE L2 -18 3254 2828 190 222 0 0 chr10 19570644 19570680 -120746085 - MIR SINE MIR -61 147 112 234 0 0 0 chr10 19570743 19570769 -120745996 + (A)n Simple_repeat Simple_repeat 1 26 0 1892 191 91 0 chr10 19571218 19571579 -120745186 + MSTD LTR MaLR 3 396 0 237 247 187 13 chr10 19571583 19571733 -120745032 - L1ME4a LINE L1 0 6121 5946 613 203 94 22 chr10 19572474 19572612 -120744153 + MLT1E LTR MaLR 22 169 -424 * 1198 206 26 9 chr10 19572609 19572837 -120743928 + MLT1E LTR MaLR 362 593 0 2266 120 0 3 chr10 19573219 19573528 -120743237 + AluSq SINE Alu 1 308 -5 22 0 0 0 chr10 19573731 19573753 -120743012 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr10 19573843 19573871 -120742894 + AT_rich Low_complexity Low_complexity 1 28 0 12094 99 9 3 chr10 19573961 19575674 -120741091 - L1P LINE L1 -1171 4975 3252 7039 108 19 1 chr10 19575672 19576713 -120740052 + L1P LINE L1 2196 3255 -2891 * 22 0 0 0 chr10 19576719 19576741 -120740024 + AT_rich Low_complexity Low_complexity 1 22 0 198 284 123 12 chr10 19576907 19576988 -120739777 + MIR3 SINE MIR 8 97 -111 5108 148 47 16 chr10 19577429 19578302 -120738463 + MER49 LTR ERV1 15 914 -9 1648 112 0 9 chr10 19578428 19578652 -120738113 + AluSp SINE Alu 79 300 -13 2138 110 0 23 chr10 19578947 19579247 -120737518 + AluSx SINE Alu 1 293 -19 5324 84 132 0 chr10 19579297 19580027 -120736738 - LTR12 LTR ERV1 0 826 1 755 185 44 54 chr10 19580202 19580407 -120736358 - pTR5 LTR ERV1 -1493 945 743 2341 106 0 3 chr10 19581779 19582090 -120734675 - AluSg SINE Alu 0 310 1 296 271 163 23 chr10 19583423 19583552 -120733213 - MER5B DNA MER1_type -1 177 31 2190 112 0 7 chr10 19583553 19583857 -120732908 - AluSg SINE Alu -8 302 1 28 0 0 0 chr10 19584226 19584254 -120732511 + AT_rich Low_complexity Low_complexity 1 28 0 200 265 60 12 chr10 19585301 19585384 -120731381 + MIR SINE MIR 117 203 -59 229 254 0 34 chr10 19585974 19586033 -120730732 - MER5B DNA MER1_type -121 57 1 232 246 46 0 chr10 19587930 19587995 -120728770 + MIR SINE MIR 64 131 -131 21 57 0 0 chr10 19588130 19588165 -120728600 + AT_rich Low_complexity Low_complexity 1 35 0 1800 220 17 98 chr10 19589161 19589751 -120727014 - MER34 LTR ERV1 0 542 1 457 287 138 35 chr10 19589806 19590006 -120726759 - L2 LINE L2 -6 3307 3068 1245 193 49 58 chr10 19590006 19590332 -120726433 + MER33 DNA MER1_type 2 324 0 457 287 138 35 chr10 19590332 19590413 -120726352 - L2 LINE L2 -245 3068 2997 1796 178 0 31 chr10 19592176 19592496 -120724269 + AluJo SINE Alu 1 310 -2 186 353 92 29 chr10 19593432 19593605 -120723160 + L2 LINE L2 458 641 -2673 265 139 70 0 chr10 19593803 19593846 -120722919 + L2 LINE L2 3213 3258 -14 2376 96 0 0 chr10 19594227 19594528 -120722237 + AluSq SINE Alu 1 301 -12 1687 197 3 3 chr10 19595607 19595911 -120720854 - AluJo SINE Alu -6 306 3 927 216 140 56 chr10 19595937 19595990 -120720775 - L1MC5 LINE L1 -284 7677 7630 2238 97 0 13 chr10 19595990 19596288 -120720477 + AluSx SINE Alu 1 294 -18 927 216 140 56 chr10 19596288 19596826 -120719939 - L1MC5 LINE L1 -331 7630 7036 2376 57 0 13 chr10 19596904 19597203 -120719562 + AluY SINE Alu 1 295 -16 31 0 0 0 chr10 19597203 19597234 -120719531 + AT_rich Low_complexity Low_complexity 1 31 0 307 343 39 10 chr10 19597445 19597652 -120719113 - L1 LINE L1 -1899 4247 4035 544 224 31 85 chr10 19597687 19597946 -120718819 - L1M4 LINE L1 -4576 2249 2005 18378 153 39 20 chr10 19597957 19599975 -120716790 - L1MA2 LINE L1 -4 7719 5741 369 0 0 0 chr10 19599975 19600016 -120716749 + (TG)n Simple_repeat Simple_repeat 2 42 0 18378 153 39 20 chr10 19600016 19605554 -120711211 - L1MA2 LINE L1 -1982 5741 16 1404 239 42 71 chr10 19605556 19605717 -120711048 - L1M4 LINE L1 -4779 1867 1703 1966 127 0 27 chr10 19605717 19606016 -120710749 - AluSx SINE Alu -15 297 7 1404 239 42 71 chr10 19606016 19606625 -120710140 - L1M4 LINE L1 -4943 1703 1110 213 402 19 19 chr10 19607632 19607739 -120709026 - L2 LINE L2 -8 3264 3158 730 224 19 6 chr10 19608190 19608346 -120708419 + MER5A DNA MER1_type 32 189 0 1329 186 17 0 chr10 19610851 19611082 -120705683 - MIR SINE MIR -25 237 3 1923 64 113 39 chr10 19612206 19612489 -120704276 + AluY SINE Alu 1 304 -7 1804 173 14 0 chr10 19612500 19612789 -120703976 + AluJo SINE Alu 1 293 -19 2235 99 0 0 chr10 19612793 19613095 -120703670 + AluSg SINE Alu 1 302 0 688 168 74 0 chr10 19613988 19614137 -120702628 - L1MB2 LINE L1 -18 6153 5994 2102 130 10 0 chr10 19614353 19614653 -120702112 + AluSx SINE Alu 1 303 -9 29 78 0 0 chr10 19615077 19615141 -120701624 + AT_rich Low_complexity Low_complexity 1 64 0 1465 155 125 39 chr10 19615619 19615955 -120700810 - MLT1A1 LTR MaLR 0 365 1 1644 215 7 0 chr10 19616015 19616317 -120700448 + AluJo SINE Alu 1 304 -8 1692 168 0 23 chr10 19616336 19616640 -120700125 + AluJo SINE Alu 1 297 -15 913 164 0 0 chr10 19617182 19617328 -120699437 + AluJb SINE Alu 1 146 -166 2041 122 0 0 chr10 19617335 19617605 -120699160 + AluSx SINE Alu 20 289 -23 1408 171 25 22 chr10 19617605 19617880 -120698885 + MSTB LTR MaLR 147 422 -4 484 266 159 14 chr10 19617889 19618242 -120698523 + LTR33 LTR ERVL 45 448 -73 2220 80 28 0 chr10 19618926 19619213 -120697552 + AluSx SINE Alu 1 295 -17 278 271 8 0 chr10 19619565 19619683 -120697082 + (TA)n Simple_repeat Simple_repeat 2 120 0 26 0 0 0 chr10 19620037 19620063 -120696702 + AT_rich Low_complexity Low_complexity 1 26 0 2433 93 0 0 chr10 19621097 19621409 -120695356 + AluSx SINE Alu 1 312 0 22 80 0 0 chr10 19622213 19622263 -120694502 + AT_rich Low_complexity Low_complexity 1 50 0 452 316 75 5 chr10 19625795 19625982 -120690783 - MIR SINE MIR -3 259 60 2403 42 0 78 chr10 19626008 19626342 -120690423 + AluY SINE Alu 4 311 0 243 154 39 0 chr10 19626385 19626437 -120690328 + (TTCA)n Simple_repeat Simple_repeat 1 54 0 205 233 0 0 chr10 19626599 19626642 -120690123 - MIR SINE MIR -37 225 183 865 125 0 0 chr10 19627296 19627416 -120689349 - AluSg/x SINE Alu -18 294 175 2112 116 13 7 chr10 19628306 19628607 -120688158 + AluSx SINE Alu 1 303 -9 1193 194 184 3 chr10 19629276 19629585 -120687180 - MLT1A1 LTR MaLR 0 365 1 2227 116 3 0 chr10 19630521 19630832 -120685933 + AluSx SINE Alu 1 312 0 2452 99 5 27 chr10 19630969 19631371 -120685394 - L1MA2 LINE L1 0 6304 5912 22 0 0 0 chr10 19633519 19633541 -120683224 + AT_rich Low_complexity Low_complexity 1 22 0 3492 97 57 0 chr10 19634002 19634509 -120682256 + L1PA10 LINE L1 5617 6152 -16 315 304 22 22 chr10 19635742 19635877 -120680888 - LTR16C LTR ERVL 0 491 357 3912 103 4 2 chr10 19636729 19637282 -120679483 - MER41A LTR ERV1 0 554 1 3301 98 16 18 chr10 19637420 19637910 -120678855 + MER1A DNA MER1_type 40 528 -1 30 69 0 0 chr10 19638304 19638362 -120678403 + AT_rich Low_complexity Low_complexity 1 58 0 3870 230 85 20 chr10 19638703 19640073 -120676692 + L1M4 LINE L1 2817 4275 -1871 812 172 57 62 chr10 19640188 19640380 -120676385 + AluJb SINE Alu 120 310 -2 189 283 98 11 chr10 19640515 19640607 -120676158 - MIR SINE MIR -13 249 150 216 328 0 0 chr10 19641681 19641748 -120675017 - MIR SINE MIR -12 250 184 259 273 78 0 chr10 19641908 19641985 -120674780 + MIR SINE MIR 47 129 -79 203 167 0 24 chr10 19642123 19642165 -120674600 + GA-rich Low_complexity Low_complexity 2 42 0 3549 149 61 16 chr10 19642409 19643143 -120673622 + LTR1B LTR ERV1 1 785 0 2501 262 195 23 chr10 19643222 19644232 -120672533 - L2 LINE L2 -632 2682 1499 2156 120 10 0 chr10 19644326 19644635 -120672130 - AluSx SINE Alu 0 312 1 704 260 52 45 chr10 19646152 19646608 -120670157 + L1M4c LINE L1 1483 2088 -4475 2016 80 4 7 chr10 19646649 19646923 -120669842 - L1PA8 LINE L1 -3 6169 5897 1464 66 0 0 chr10 19646926 19647123 -120669642 + L1PA8 LINE L1 5682 5878 -294 1174 244 66 15 chr10 19647118 19647782 -120668983 + L1M4c LINE L1 2128 2776 -3606 * 1257 189 56 87 chr10 19649053 19649517 -120667248 - MER66A LTR ERV1 0 478 99 571 218 103 6 chr10 19649656 19649812 -120666953 - MIR SINE MIR -11 251 81 186 191 0 0 chr10 19649839 19649881 -120666884 + (TATATG)n Simple_repeat Simple_repeat 4 45 0 279 190 0 0 chr10 19650048 19650106 -120666659 + GA-rich Low_complexity Low_complexity 3 60 0 233 332 130 39 chr10 19650267 19650475 -120666290 + MIR SINE MIR 7 233 -29 301 279 58 27 chr10 19650757 19651207 -120665558 - L1ME LINE L1 -651 5511 5043 247 349 23 14 chr10 19651213 19651428 -120665337 - L1ME LINE L1 -1134 5012 4796 635 242 8 0 chr10 19651533 19651661 -120665104 - FLAM_A SINE Alu -4 129 1 402 158 53 83 chr10 19651763 19651805 -120664960 - L1ME3A LINE L1 -18 6152 6110 2186 92 0 4 chr10 19651805 19652111 -120664654 + AluSg SINE Alu 1 305 0 402 158 53 83 chr10 19652111 19652200 -120664565 - L1ME3A LINE L1 -60 6110 6024 1833 181 0 0 chr10 19652748 19653047 -120663718 - AluJo SINE Alu -12 300 2 2573 62 3 0 chr10 19653278 19653582 -120663183 + AluY SINE Alu 1 305 -6 272 291 94 55 chr10 19653591 19653718 -120663047 + MIR3 SINE MIR 41 172 -36 220 233 108 50 chr10 19653726 19653781 -120662984 + MIR SINE MIR 132 182 -80 1842 158 44 116 chr10 19653781 19654325 -120662440 + MLT1D LTR MaLR 1 505 0 220 233 108 50 chr10 19654325 19654389 -120662376 + MIR SINE MIR 182 258 -4 234 0 0 0 chr10 19654629 19654655 -120662110 + (TATG)n Simple_repeat Simple_repeat 2 27 0 438 365 39 37 chr10 19654727 19655135 -120661630 + L2 LINE L2 2565 2973 -341 734 234 43 0 chr10 19655399 19655587 -120661178 - MER3 DNA MER1_type -13 196 1 2090 98 26 36 chr10 19655819 19656124 -120660641 - AluSc SINE Alu -7 302 1 295 194 16 0 chr10 19656181 19656243 -120660522 + LTR37A LTR ERV1 116 178 -248 608 231 62 8 chr10 19656272 19656514 -120660251 + LTR37B LTR ERV1 210 464 -4 2214 107 0 10 chr10 19656549 19656847 -120659918 + AluSg1 SINE Alu 1 295 -14 279 26 0 0 chr10 19657162 19657201 -120659564 + LTR37B LTR ERV1 426 464 -4 1647 190 20 3 chr10 19657202 19657323 -120659442 + AluJo SINE Alu 1 118 -194 195 69 0 0 chr10 19657323 19657352 -120659413 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1647 190 20 3 chr10 19657352 19657525 -120659240 + AluJo SINE Alu 118 300 -12 28 48 0 0 chr10 19657952 19657994 -120658771 + AT_rich Low_complexity Low_complexity 1 42 0 326 260 104 19 chr10 19658010 19658164 -120658601 - MER34 LTR ERV1 -19 523 357 1362 114 50 9 chr10 19658247 19658466 -120658299 + MER30 DNA MER1_type 2 229 -1 504 267 41 72 chr10 19660111 19660178 -120656587 - MER5A DNA MER1_type 0 189 121 1775 173 0 26 chr10 19660178 19660484 -120656281 + AluJo SINE Alu 1 298 -14 504 267 41 72 chr10 19660484 19660611 -120656154 - MER5A DNA MER1_type -68 121 1 565 302 104 5 chr10 19662157 19662379 -120654386 + MIR SINE MIR 13 256 -6 183 333 48 0 chr10 19663085 19663148 -120653617 - MIR3 SINE MIR -4 204 139 633 230 53 53 chr10 19663160 19663391 -120653374 - MIR SINE MIR -2 260 29 185 392 29 10 chr10 19663392 19663494 -120653271 - MIR SINE MIR -75 133 30 274 306 20 20 chr10 19663707 19663805 -120652960 + MIR3 SINE MIR 78 175 -33 1599 206 63 25 chr10 19663936 19664378 -120652387 + MLT1C LTR MaLR 6 464 -3 195 129 0 0 chr10 19664382 19664413 -120652352 + (T)n Simple_repeat Simple_repeat 1 31 0 27 29 0 0 chr10 19665733 19665767 -120650998 + AT_rich Low_complexity Low_complexity 1 34 0 504 272 103 5 chr10 19665767 19665951 -120650814 - MIR SINE MIR 0 262 61 280 271 0 0 chr10 19666326 19666385 -120650380 - MER113 DNA MER1_type? -5 516 458 25 31 0 0 chr10 19666493 19666525 -120650240 + AT_rich Low_complexity Low_complexity 1 32 0 230 375 9 0 chr10 19666657 19666769 -120649996 - MIR SINE MIR -1 261 149 243 167 29 98 chr10 19666919 19666953 -120649812 - L1 LINE L1 -1281 4865 4830 1314 236 57 17 chr10 19666953 19667304 -120649461 + MLT1A1 LTR MaLR 1 365 0 243 167 29 98 chr10 19667304 19667371 -120649394 - L1 LINE L1 -1316 4830 4771 * 1582 255 28 39 chr10 19667369 19667677 -120649088 + L1ME3A LINE L1 5151 5461 -709 1410 268 17 28 chr10 19667677 19668143 -120648622 + LTR40b LTR ERVL 2 462 0 1582 255 28 39 chr10 19668143 19668527 -120648238 + L1ME3A LINE L1 5461 5845 -325 283 348 18 0 chr10 19668644 19668756 -120648009 + L2 LINE L2 1552 1665 -1649 841 267 73 13 chr10 19668757 19669072 -120647693 + L1ME3A LINE L1 5837 6170 0 197 305 63 11 chr10 19669446 19669541 -120647224 - MIR SINE MIR -2 260 161 2298 99 0 3 chr10 19670885 19671189 -120645576 + AluSg SINE Alu 1 303 -7 1014 174 122 4 chr10 19671200 19671470 -120645295 + L1MA4 LINE L1 5991 6292 -8 24 32 0 0 chr10 19671471 19671502 -120645263 + AT_rich Low_complexity Low_complexity 1 31 0 2236 109 0 0 chr10 19671769 19672071 -120644694 + AluSx SINE Alu 1 302 -10 2313 206 42 34 chr10 19672389 19673035 -120643730 - L1MB4 LINE L1 -213 5967 5317 4102 188 12 38 chr10 19673041 19673921 -120642844 - L1MC1 LINE L1 -7 6326 5469 1170 129 0 11 chr10 19674021 19674199 -120642566 + AluSg/x SINE Alu 134 309 -3 434 86 0 0 chr10 19674730 19674788 -120641977 + AluYa8 SINE Alu 165 222 -88 28 0 0 0 chr10 19674796 19674824 -120641941 + AT_rich Low_complexity Low_complexity 1 28 0 408 290 11 49 chr10 19675697 19675880 -120640885 - MER69A DNA AcHobo -1 176 1 1212 111 60 18 chr10 19677952 19678169 -120638596 + Tigger2a DNA MER2_type 1 226 -208 195 42 0 0 chr10 19678245 19678269 -120638496 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 1889 167 3 0 chr10 19678269 19678557 -120638208 - AluSx SINE Alu -19 293 5 1314 138 45 0 chr10 19678558 19678782 -120637983 + Tigger2a DNA MER2_type 191 424 -10 2291 90 3 3 chr10 19679758 19680057 -120636708 + AluSc SINE Alu 1 299 -10 30 45 0 0 chr10 19680267 19680311 -120636454 + AT_rich Low_complexity Low_complexity 1 44 0 1473 234 19 14 chr10 19680426 19680518 -120636247 - L1MC1 LINE L1 -1105 5041 4951 1672 186 3 14 chr10 19680518 19680842 -120635923 - AluJo SINE Alu 0 321 1 1473 234 19 14 chr10 19680842 19681172 -120635593 - L1MC1 LINE L1 -1195 4951 4616 20851 51 49 3 chr10 19681273 19684132 -120632633 - L1P LINE L1 -3156 2990 1 441 0 0 0 chr10 19684203 19684252 -120632513 + (TA)n Simple_repeat Simple_repeat 1 49 0 1988 144 7 0 chr10 19684252 19684543 -120632222 - AluSq SINE Alu -20 293 1 1691 96 4 8 chr10 19684835 19685085 -120631680 - AluSc SINE Alu -60 249 1 2318 107 3 0 chr10 19685227 19685535 -120631230 - AluSx SINE Alu -3 309 1 181 315 46 54 chr10 19685653 19685783 -120630982 + L3 LINE CR1 598 726 -851 302 286 94 36 chr10 19686145 19686369 -120630396 + L1ME4a LINE L1 5816 6052 -69 21 0 0 0 chr10 19686439 19686460 -120630305 + AT_rich Low_complexity Low_complexity 1 21 0 1633 233 57 35 chr10 19686560 19687067 -120629698 + L1MCa LINE L1 21 538 -5888 1952 114 9 63 chr10 19687580 19687896 -120628869 - AluSq SINE Alu -14 299 1 870 227 72 19 chr10 19688431 19688695 -120628070 + MLT1D LTR MaLR 3 280 -225 3662 179 89 4 chr10 19688701 19689462 -120627303 - LTR1B LTR ERV1 0 826 1 996 201 18 120 chr10 19689462 19689861 -120626904 + MLT1A1 LTR MaLR 3 360 -5 1070 197 9 21 chr10 19689877 19690110 -120626655 + MLT1D LTR MaLR 276 505 0 500 229 136 7 chr10 19690276 19690416 -120626349 - MER99 DNA DNA -3 825 668 * 1927 239 43 9 chr10 19690403 19690943 -120625822 - MER99 DNA DNA -269 559 2 289 287 147 21 chr10 19690944 19691087 -120625678 + MIR SINE MIR 52 212 -50 717 206 55 55 chr10 19691121 19691412 -120625353 + L1M4 LINE L1 5046 5336 -810 2648 169 87 82 chr10 19691427 19692160 -120624605 + L1MC/D LINE L1 51 787 -5639 4969 242 50 28 chr10 19692189 19693816 -120622949 + L1MC/D LINE L1 2781 4452 -1974 186 43 0 0 chr10 19693816 19693839 -120622926 + (GAAAA)n Simple_repeat Simple_repeat 4 26 0 4969 242 50 28 chr10 19693839 19693990 -120622775 + L1MC/D LINE L1 4452 4598 -1828 806 189 0 0 chr10 19693991 19694144 -120622621 - MER46A DNA MER2_type -58 178 26 2032 208 10 27 chr10 19694152 19694746 -120622019 + L1MC/D LINE L1 5058 5638 -942 1217 176 30 21 chr10 19694746 19694979 -120621786 + MER46A DNA MER2_type 2 236 0 2032 208 10 27 chr10 19694979 19695176 -120621589 + L1MC/D LINE L1 5638 5837 -743 6665 225 75 23 chr10 19695855 19697829 -120618936 + L1MCa LINE L1 58 2331 -4095 5215 40 0 2 chr10 19697829 19698425 -120618340 + L1PA4 LINE L1 5561 6155 0 6665 225 75 23 chr10 19698425 19698979 -120617786 + L1MCa LINE L1 2331 2854 -3572 5643 274 28 38 chr10 19698988 19702336 -120614429 + L1P4 LINE L1 7 3881 -3703 2831 186 6 0 chr10 19702337 19702990 -120613775 + L1P4 LINE L1 6237 6894 -709 244 220 9 28 chr10 19703676 19703785 -120612980 + (CATA)n Simple_repeat Simple_repeat 4 110 0 276 203 108 14 chr10 19705635 19705709 -120611056 - L2 LINE L2 -3 3310 3230 288 299 19 65 chr10 19706621 19706728 -120610037 - MIR3 SINE MIR -3 205 104 1257 206 29 0 chr10 19708361 19708633 -120608132 + L1M3 LINE L1 3964 4243 -1903 1153 163 0 15 chr10 19708763 19708966 -120607799 + L1M3 LINE L1 5603 5802 -381 937 192 91 83 chr10 19708966 19709053 -120607712 - L1M4 LINE L1 -777 5369 5284 2186 116 0 0 chr10 19709053 19709354 -120607411 - AluSc SINE Alu -8 301 1 937 192 91 83 chr10 19709354 19709750 -120607015 - L1M4 LINE L1 -862 5284 4752 405 0 0 0 chr10 19709813 19709858 -120606907 + (TG)n Simple_repeat Simple_repeat 1 45 0 1940 115 7 28 chr10 19709858 19710145 -120606620 - AluSx SINE Alu -31 281 1 220 315 195 0 chr10 19710723 19710872 -120605893 + L3b LINE CR1 1147 1324 -259 225 351 129 12 chr10 19711040 19711211 -120605554 - MIR SINE MIR -6 256 66 270 138 0 0 chr10 19711620 19711678 -120605087 + (CCCCCA)n Simple_repeat Simple_repeat 2 59 0 2221 92 0 13 chr10 19712142 19712445 -120604320 + AluY SINE Alu 1 299 -12 2292 108 0 3 chr10 19712820 19713125 -120603640 + AluSq SINE Alu 1 304 -9 2216 121 0 0 chr10 19713219 19713517 -120603248 + AluSx SINE Alu 1 298 -14 302 325 167 0 chr10 19713785 19713905 -120602860 - L2 LINE L2 0 3272 3133 311 191 43 9 chr10 19714286 19714401 -120602364 + (TA)n Simple_repeat Simple_repeat 2 120 0 191 220 202 55 chr10 19715411 19715520 -120601245 - MIR3 SINE MIR -54 154 30 279 275 11 0 chr10 19716893 19716984 -120599781 + CT-rich Low_complexity Low_complexity 1 92 0 250 137 36 43 chr10 19716984 19717123 -120599642 - HERV17 LTR ERV1 -7764 862 725 244 205 205 57 chr10 19717630 19717752 -120599013 - MIR SINE MIR -53 209 70 197 0 0 67 chr10 19718192 19718222 -120598543 + (TCTCTG)n Simple_repeat Simple_repeat 3 30 0 211 267 218 20 chr10 19718233 19718334 -120598431 + MIR SINE MIR 70 190 -72 184 298 89 57 chr10 19718711 19718835 -120597930 + L2 LINE L2 1290 1417 -1897 180 185 108 77 chr10 19719196 19719261 -120597504 - MIR3 SINE MIR -50 158 92 243 0 0 0 chr10 19719307 19719334 -120597431 + (ATTG)n Simple_repeat Simple_repeat 1 27 0 1913 114 11 4 chr10 19719334 19719614 -120597151 - AluSx SINE Alu -30 282 1 492 301 193 1 chr10 19719810 19720126 -120596639 + L2 LINE L2 2665 3042 -271 1345 146 0 23 chr10 19720502 19720722 -120596043 + AluJo SINE Alu 85 299 -13 25 31 0 0 chr10 19720724 19720756 -120596009 + AT_rich Low_complexity Low_complexity 1 32 0 299 219 62 0 chr10 19722355 19722419 -120594346 + L2 LINE L2 3205 3272 0 3559 63 13 0 chr10 19722422 19722882 -120593883 - L1PA4 LINE L1 -436 5719 5254 3703 54 0 0 chr10 19722892 19723321 -120593444 + L1PA4 LINE L1 5716 6144 -11 225 196 0 0 chr10 19724050 19724106 -120592659 + (TA)n Simple_repeat Simple_repeat 2 57 0 2800 87 19 5 chr10 19724316 19724684 -120592081 - THE1C LTR MaLR -2 373 1 964 114 34 13 chr10 19724969 19725118 -120591647 + MLT1A1 LTR MaLR 1 152 -213 1941 131 10 20 chr10 19725223 19725521 -120591244 - AluJb SINE Alu -15 297 3 3639 156 23 26 chr10 19726879 19727256 -120589509 - LTR36 LTR ERV1 -2 609 233 2331 94 7 0 chr10 19727256 19727563 -120589202 - AluSx SINE Alu -3 309 1 3639 156 23 26 chr10 19727563 19727796 -120588969 - LTR36 LTR ERV1 -378 233 1 293 293 143 15 chr10 19728734 19728867 -120587898 + MIR SINE MIR 34 183 -79 286 216 0 0 chr10 19729493 19729544 -120587221 + MIR SINE MIR 79 129 -79 1689 181 0 30 chr10 19729931 19730235 -120586530 + AluJb SINE Alu 5 299 -13 255 291 77 56 chr10 19731001 19731197 -120585568 - MIR SINE MIR -43 219 20 2154 105 20 3 chr10 19731421 19731725 -120585040 - AluY SINE Alu -2 309 1 1828 234 26 86 chr10 19732544 19732671 -120584094 - LTR9 LTR ERV1 0 612 479 2210 103 6 10 chr10 19732671 19732982 -120583783 + AluSx SINE Alu 1 310 -2 1828 234 26 86 chr10 19732982 19733505 -120583260 - LTR9 LTR ERV1 -133 479 1 441 207 43 9 chr10 19733577 19733693 -120583072 - LTR37A LTR ERV1 -18 408 289 604 216 151 8 chr10 19733698 19733957 -120582808 - LTR37A LTR ERV1 -53 373 78 2156 92 0 3 chr10 19733961 19734243 -120582522 + AluY SINE Alu 1 281 -30 195 42 0 0 chr10 19734253 19734277 -120582488 + (GAAAA)n Simple_repeat Simple_repeat 3 26 0 324 262 91 77 chr10 19734933 19735227 -120581538 + L1M2 LINE L1 630 994 -5855 205 298 0 0 chr10 19736508 19736565 -120580200 + (TA)n Simple_repeat Simple_repeat 1 57 0 184 302 0 0 chr10 19737354 19737397 -120579368 - L2 LINE L2 -83 3230 3188 2133 111 0 7 chr10 19738628 19738955 -120577810 - AluSx SINE Alu 0 325 1 1639 185 13 4 chr10 19739131 19739459 -120577306 + MER33 DNA MER1_type 1 323 -1 2087 137 0 13 chr10 19740882 19741052 -120575713 - AluSx SINE Alu -9 303 137 2092 117 0 26 chr10 19741052 19741361 -120575404 - AluSx SINE Alu -11 301 1 2087 137 0 13 chr10 19741361 19741497 -120575268 - AluSx SINE Alu -175 137 1 725 248 56 85 chr10 19742900 19743219 -120573546 + MLT1J1 LTR MaLR 12 321 -125 363 236 56 49 chr10 19744626 19744770 -120571995 - L2 LINE L2 0 3313 3169 561 68 0 0 chr10 19745068 19745142 -120571623 + (TTCC)n Simple_repeat Simple_repeat 2 75 0 5475 126 6 0 chr10 19745676 19746499 -120570266 - L1PB1 LINE L1 -1 6150 5323 1071 69 0 8 chr10 19746809 19746940 -120569825 + AluSg SINE Alu 5 134 -176 2275 102 0 7 chr10 19746940 19747243 -120569522 + AluSq SINE Alu 1 301 -12 2051 110 0 0 chr10 19747476 19747757 -120569008 + AluSx SINE Alu 1 281 -31 765 44 0 0 chr10 19747667 19747759 -120569006 + AluSg/x SINE Alu 190 308 0 195 0 0 37 chr10 19747759 19747786 -120568979 + (CAA)n Simple_repeat Simple_repeat 2 180 0 1845 162 7 39 chr10 19749561 19749870 -120566895 + AluJo SINE Alu 1 299 -13 22 35 0 0 chr10 19750020 19750049 -120566716 + AT_rich Low_complexity Low_complexity 1 29 0 415 285 38 44 chr10 19750688 19750846 -120565919 - MIR SINE MIR -18 244 88 2309 102 3 0 chr10 19751230 19751533 -120565232 + AluSp SINE Alu 1 304 -9 216 0 0 0 chr10 19751705 19751729 -120565036 + (T)n Simple_repeat Simple_repeat 1 24 0 2115 120 0 0 chr10 19754406 19754728 -120562037 - AluSx SINE Alu 0 323 2 1027 201 135 66 chr10 19755178 19755305 -120561460 + MLT1B LTR MaLR 1 118 -272 2282 119 0 0 chr10 19755305 19755615 -120561150 - AluSx SINE Alu -2 310 1 1027 201 135 66 chr10 19755615 19755850 -120560915 + MLT1B LTR MaLR 118 388 -2 1904 251 46 42 chr10 19755897 19756654 -120560111 - L1ME3A LINE L1 -7 6163 5404 294 73 0 0 chr10 19756698 19756739 -120560026 + (GA)n Simple_repeat Simple_repeat 2 42 0 208 132 0 38 chr10 19756745 19756798 -120559967 + (TA)n Simple_repeat Simple_repeat 1 51 0 25 0 0 0 chr10 19756883 19756908 -120559857 + AT_rich Low_complexity Low_complexity 1 25 0 2060 87 0 99 chr10 19757594 19757926 -120558839 + AluSp SINE Alu 1 299 -14 663 298 101 0 chr10 19758105 19758333 -120558432 + MIR SINE MIR 12 262 0 435 290 51 7 chr10 19758442 19758580 -120558185 - MIR SINE MIR -116 146 3 218 316 0 0 chr10 19759857 19759914 -120556851 + CT-rich Low_complexity Low_complexity 2 58 0 1711 137 0 29 chr10 19762531 19762808 -120553957 + AluSx SINE Alu 43 311 -1 326 284 119 8 chr10 19764016 19764150 -120552615 - MIR SINE MIR -24 238 90 204 40 0 0 chr10 19766311 19766336 -120550429 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 218 305 40 62 chr10 19766491 19766668 -120550097 - L2 LINE L2 -180 3092 2920 1088 177 6 0 chr10 19766830 19767011 -120549754 - AluSg/x SINE Alu -42 270 89 1675 131 123 0 chr10 19767653 19767913 -120548852 - AluSx SINE Alu -20 292 1 1535 68 0 5 chr10 19768089 19768295 -120548470 + L1PA4 LINE L1 5951 6155 0 1792 179 8 17 chr10 19768503 19768860 -120547905 + L1PA16 LINE L1 5813 6166 0 306 306 83 0 chr10 19768972 19769093 -120547672 + MIR SINE MIR 24 154 -108 872 145 101 0 chr10 19769527 19769665 -120547100 + FRAM SINE Alu 1 152 -24 264 30 0 0 chr10 19769885 19769918 -120546847 + (TG)n Simple_repeat Simple_repeat 2 34 0 29 18 0 55 chr10 19770554 19770609 -120546156 + AT_rich Low_complexity Low_complexity 1 52 0 655 282 241 10 chr10 19771191 19771606 -120545159 - MLT1K LTR MaLR -3 585 75 2122 125 20 0 chr10 19772262 19772565 -120544200 - AluSq SINE Alu -4 309 1 2140 119 0 20 chr10 19773457 19773759 -120543006 - AluSx SINE Alu -16 296 1 962 188 86 139 chr10 19775037 19775199 -120541566 - MER4C LTR ERV1 -1 464 295 1243 151 192 41 chr10 19775199 19775470 -120541295 + AluJb SINE Alu 1 312 0 962 188 86 139 chr10 19775470 19775797 -120540968 - MER4C LTR ERV1 -170 295 1 23 0 0 0 chr10 19776392 19776415 -120540350 + AT_rich Low_complexity Low_complexity 1 23 0 402 237 104 22 chr10 19778382 19778517 -120538248 + MIR SINE MIR 104 249 -13 2167 113 0 3 chr10 19778546 19778870 -120537895 + AluSg SINE Alu 1 310 0 1631 190 0 24 chr10 19779424 19779783 -120536982 - AluJo SINE Alu 0 352 1 694 230 26 7 chr10 19780043 19780195 -120536570 + FRAM SINE Alu 1 155 -11 470 218 41 113 chr10 19780306 19780401 -120536364 - L1ME4a LINE L1 -3 6118 6018 2186 109 3 3 chr10 19780401 19780703 -120536062 + AluSx SINE Alu 1 302 -10 470 218 41 113 chr10 19780703 19780873 -120535892 - L1ME4a LINE L1 -103 6018 5872 380 324 105 5 chr10 19780890 19781109 -120535656 + MIR SINE MIR 9 249 -13 21 36 0 0 chr10 19781188 19781216 -120535549 + AT_rich Low_complexity Low_complexity 1 28 0 2523 99 31 6 chr10 19781256 19781611 -120535154 - THE1B LTR MaLR 0 364 1 593 289 21 5 chr10 19781740 19781927 -120534838 + MIR SINE MIR 58 247 -15 1617 191 13 43 chr10 19782211 19782517 -120534248 - L1MC3 LINE L1 -13 7772 7458 791 143 0 71 chr10 19782517 19782551 -120534214 - L1PA11 LINE L1 0 6174 6139 237 108 0 0 chr10 19782551 19782588 -120534177 + (CAATT)n Simple_repeat Simple_repeat 4 40 0 791 143 0 71 chr10 19782588 19782721 -120534044 - L1PA11 LINE L1 -35 6139 6019 1674 158 8 8 chr10 19782721 19782987 -120533778 - AluJb SINE Alu -40 272 7 1617 191 13 43 chr10 19782987 19783071 -120533694 - L1MC3 LINE L1 -325 7460 7393 271 122 0 0 chr10 19783078 19783127 -120533638 - L1MB7 LINE L1 -19 6165 6117 672 289 141 0 chr10 19783613 19783883 -120532882 - L2 LINE L2 0 3313 3006 2900 101 7 30 chr10 19783952 19783991 -120532774 - MSTA LTR MaLR -2 426 388 2342 102 3 0 chr10 19783991 19784296 -120532469 + AluSp SINE Alu 1 306 -7 2900 101 7 30 chr10 19784296 19784692 -120532073 - MSTA LTR MaLR -40 388 1 307 313 37 107 chr10 19784717 19784989 -120531776 - L2 LINE L2 -6 3266 3014 21 36 0 0 chr10 19785956 19785984 -120530781 + AT_rich Low_complexity Low_complexity 1 28 0 516 189 0 0 chr10 19786043 19786186 -120530579 + CT-rich Low_complexity Low_complexity 1 143 0 1541 154 44 22 chr10 19786186 19786458 -120530307 - AluJo SINE Alu -34 278 1 313 247 0 14 chr10 19786479 19786552 -120530213 - L1ME4a LINE L1 -3 6118 6047 989 150 0 35 chr10 19786826 19786999 -120529766 - AluJo SINE Alu -25 287 121 482 306 150 9 chr10 19787419 19787765 -120529000 - L1ME4a LINE L1 -308 5813 5419 471 323 71 24 chr10 19788679 19789017 -120527748 - L2 LINE L2 -463 2851 2498 353 304 58 58 chr10 19789022 19789229 -120527536 - MIR SINE MIR -48 214 8 3446 124 4 0 chr10 19789302 19789835 -120526930 - L1PB1 LINE L1 -4 6147 5613 189 0 0 0 chr10 19790122 19790143 -120526622 + (TTCA)n Simple_repeat Simple_repeat 4 24 0 858 179 0 24 chr10 19790190 19790358 -120526407 - FRAM SINE Alu -5 171 8 3047 193 14 49 chr10 19790361 19790902 -120525863 - L1MB5 LINE L1 -37 6137 5626 1215 66 16 11 chr10 19790902 19791084 -120525681 - L1MA4 LINE L1 -11 6289 6107 3047 193 14 49 chr10 19791084 19791259 -120525506 - L1MB5 LINE L1 -548 5626 5446 616 302 44 44 chr10 19791617 19791932 -120524833 - L2 LINE L2 0 3313 2999 654 200 106 64 chr10 19793876 19794111 -120522654 - MIR SINE MIR -17 245 1 1839 127 3 77 chr10 19794147 19794470 -120522295 - AluJb SINE Alu -13 299 1 355 145 0 26 chr10 19794819 19794895 -120521870 + (TCTCC)n Simple_repeat Simple_repeat 2 75 0 317 313 27 9 chr10 19795000 19795112 -120521653 + L2 LINE L2 3159 3272 0 450 244 43 13 chr10 19795186 19795366 -120521399 - MLT1L LTR MaLR 0 615 397 283 279 38 0 chr10 19795448 19795527 -120521238 - MLT1L LTR MaLR -346 269 188 35 24 0 0 chr10 19795738 19795780 -120520985 + AT_rich Low_complexity Low_complexity 1 42 0 247 203 39 55 chr10 19795802 19795984 -120520781 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 * 294 222 60 18 chr10 19795895 19796062 -120520703 + (TA)n Simple_repeat Simple_repeat 2 175 0 21 57 0 0 chr10 19796108 19796143 -120520622 + AT_rich Low_complexity Low_complexity 1 35 0 1146 294 109 29 chr10 19797040 19797794 -120518971 - L2 LINE L2 -13 3300 2484 390 21 0 0 chr10 19797794 19797841 -120518924 + (TG)n Simple_repeat Simple_repeat 2 48 0 1146 294 109 29 chr10 19797841 19797874 -120518891 - L2 LINE L2 -829 2484 2455 53 17 0 0 chr10 19798334 19798394 -120518371 + AT_rich Low_complexity Low_complexity 1 60 0 187 298 18 0 chr10 19798996 19799053 -120517712 - L2 LINE L2 -1 3271 3214 2141 122 0 0 chr10 19799128 19799415 -120517350 - AluSx SINE Alu -13 299 13 1395 177 25 11 chr10 19799431 19799708 -120517057 - L1MA5A LINE L1 -2 6295 6015 243 301 62 0 chr10 19800385 19800498 -120516267 + MIR SINE MIR 126 245 -17 204 256 51 51 chr10 19802414 19802492 -120514273 + MIR SINE MIR 35 112 -150 352 272 24 104 chr10 19802539 19802664 -120514101 + L2 LINE L2 3199 3313 0 638 284 120 9 chr10 19803029 19803254 -120513511 + MIR SINE MIR 13 262 0 2115 130 0 16 chr10 19803838 19804145 -120512620 - AluSx SINE Alu -10 302 1 1389 111 94 148 chr10 19804727 19804859 -120511906 + MER44D DNA MER2_type 1 139 -2352 2070 126 0 0 chr10 19804859 19805145 -120511620 - AluSx SINE Alu -10 302 17 1389 111 94 148 chr10 19805145 19805363 -120511402 + MER44D DNA MER2_type 139 602 -7 264 151 75 0 chr10 19805651 19805704 -120511061 + L1MA8 LINE L1 6232 6288 -3 815 158 0 0 chr10 19806037 19806157 -120510608 + FLAM_C SINE Alu 1 120 -23 1835 137 3 7 chr10 19806203 19806487 -120510278 + AluJo SINE Alu 23 305 -7 486 270 38 27 chr10 19808353 19808538 -120508227 + MIR SINE MIR 3 189 -73 552 358 29 8 chr10 19808707 19808953 -120507812 + MIR SINE MIR 12 262 0 217 242 0 45 chr10 19809011 19809077 -120507688 + GA-rich Low_complexity Low_complexity 5 67 0 21 0 0 0 chr10 19809423 19809444 -120507321 + AT_rich Low_complexity Low_complexity 1 21 0 409 304 45 56 chr10 19809523 19809809 -120506956 - L1ME3A LINE L1 -241 5929 5647 359 294 56 13 chr10 19809989 19810168 -120506597 - L1ME3A LINE L1 -479 5642 5458 344 283 86 0 chr10 19810198 19810396 -120506369 - L1ME3A LINE L1 -814 5332 5118 196 271 43 14 chr10 19811112 19811182 -120505583 + MIR3 SINE MIR 96 167 -41 2316 112 0 3 chr10 19812197 19812509 -120504256 + AluSx SINE Alu 1 311 -1 2033 138 0 3 chr10 19813867 19814156 -120502609 + AluSq SINE Alu 1 288 -25 185 286 186 0 chr10 19814882 19814952 -120501813 - L2 LINE L2 0 3272 3190 969 257 100 55 chr10 19814983 19815055 -120501710 - L2 LINE L2 -90 3223 3156 2146 136 0 0 chr10 19815055 19815364 -120501401 + AluSx SINE Alu 1 309 -3 969 257 100 55 chr10 19815364 19815692 -120501073 - L2 LINE L2 -157 3156 2805 193 328 15 15 chr10 19816269 19816336 -120500429 - MIR3 SINE MIR -31 177 111 1817 139 55 0 chr10 19816453 19816727 -120500038 + AluY SINE Alu 1 289 -22 1950 165 0 3 chr10 19816735 19817032 -120499733 + AluJb SINE Alu 1 296 -16 1907 139 14 3 chr10 19817625 19817919 -120498846 - AluSx SINE Alu -15 297 1 23 0 0 0 chr10 19817948 19817971 -120498794 + AT_rich Low_complexity Low_complexity 1 23 0 229 65 0 0 chr10 19817971 19818017 -120498748 - LTR66 LTR ERVL -171 439 394 252 213 0 0 chr10 19818017 19818078 -120498687 + L1MC4 LINE L1 6636 6696 -1346 522 0 0 0 chr10 19818079 19818137 -120498628 + (GA)n Simple_repeat Simple_repeat 2 59 0 824 139 49 0 chr10 19818249 19818371 -120498394 - AluSq/x SINE Alu -184 129 2 2248 154 0 23 chr10 19818401 19818745 -120498020 + MER1B DNA MER1_type 1 336 -1 1911 152 7 10 chr10 19819208 19819510 -120497255 + AluSx SINE Alu 3 303 -9 1280 237 78 72 chr10 19819728 19820203 -120496562 + L1MC5 LINE L1 7101 7583 -378 366 23 0 0 chr10 19820203 19820246 -120496519 + (CA)n Simple_repeat Simple_repeat 2 44 0 1280 237 78 72 chr10 19820246 19820441 -120496324 + L1MC5 LINE L1 7583 7775 -186 2177 124 0 0 chr10 19820468 19820766 -120495999 + AluSx SINE Alu 1 298 -14 240 207 207 50 chr10 19823181 19823302 -120493463 - MIR SINE MIR -82 180 41 404 167 22 0 chr10 19823352 19823442 -120493323 + CT-rich Low_complexity Low_complexity 1 92 0 1688 199 7 0 chr10 19823442 19823748 -120493017 - AluJb SINE Alu -4 308 1 1971 159 0 0 chr10 19823824 19824133 -120492632 - AluJb SINE Alu -1 311 3 201 207 17 52 chr10 19824325 19824383 -120492382 - MIR SINE MIR -112 96 41 1426 218 93 34 chr10 19825309 19825726 -120491039 - LTR47B LTR ERVL 0 443 2 180 143 0 0 chr10 19825936 19825949 -120490816 + (A)n Simple_repeat Simple_repeat 1 13 -22 2174 108 0 31 chr10 19825949 19826272 -120490493 + AluSq SINE Alu 1 313 0 180 143 0 0 chr10 19826272 19826293 -120490472 + (A)n Simple_repeat Simple_repeat 12 35 0 247 271 29 0 chr10 19826373 19826443 -120490322 + MIR SINE MIR 31 102 -160 2166 117 3 10 chr10 19826561 19826860 -120489905 - AluSq SINE Alu -16 297 1 2341 93 0 7 chr10 19828990 19829291 -120487474 - AluSx SINE Alu -8 304 6 415 243 0 107 chr10 19830039 19830208 -120486557 - MIR SINE MIR -52 210 60 1698 162 21 10 chr10 19830623 19830913 -120485852 + AluJb SINE Alu 1 293 -19 193 277 108 12 chr10 19831363 19831446 -120485319 + MIR SINE MIR 32 122 -86 188 333 48 48 chr10 19831534 19831639 -120485126 - L2 LINE L2 -10 3303 3199 2950 174 55 5 chr10 19832098 19832678 -120484087 + L1MB3 LINE L1 5532 6140 -43 2684 34 0 0 chr10 19832679 19832977 -120483788 + AluY SINE Alu 1 298 -13 1795 165 0 17 chr10 19832988 19833279 -120483486 + AluJo SINE Alu 1 286 -26 2245 128 141 11 chr10 19833607 19833983 -120482782 + MSTA LTR MaLR 2 426 -2 1917 245 17 21 chr10 19834996 19835465 -120481300 + MLT1C LTR MaLR 1 467 0 250 333 117 17 chr10 19836616 19836736 -120480029 + MIR3 SINE MIR 43 174 -34 3134 94 48 64 chr10 19836982 19837480 -120479285 - L1PB4 LINE L1 0 6156 5667 491 320 80 40 chr10 19838338 19838738 -120478027 + L2 LINE L2 2285 2700 -614 1409 138 111 16 chr10 19838825 19839114 -120477651 + MER4A LTR ERV1 264 638 -26 1553 77 5 0 chr10 19839217 19839411 -120477354 + L1PA7 LINE L1 5957 6151 -3 30 27 0 0 chr10 19839543 19839580 -120477185 + AT_rich Low_complexity Low_complexity 1 37 0 342 206 0 0 chr10 19839884 19839957 -120476808 + (TATG)n Simple_repeat Simple_repeat 3 75 0 23 33 0 0 chr10 19840020 19840050 -120476715 + AT_rich Low_complexity Low_complexity 1 30 0 2386 54 6 78 chr10 19840520 19840851 -120475914 + AluY SINE Alu 1 307 -4 2183 153 36 61 chr10 19841290 19841733 -120475032 + MSTB1 LTR MaLR 1 432 0 2786 191 12 18 chr10 19842528 19843032 -120473733 + MLT1D LTR MaLR 5 505 0 1575 186 0 39 chr10 19843137 19843448 -120473317 - AluJo SINE Alu -13 299 1 407 296 177 10 chr10 19843932 19844135 -120472630 + MIR SINE MIR 16 252 -10 22 0 0 0 chr10 19844142 19844164 -120472601 + AT_rich Low_complexity Low_complexity 1 22 0 1817 210 37 68 chr10 19844261 19844394 -120472371 + LTR55 LTR ERV 1 136 -412 1740 171 0 19 chr10 19844394 19844583 -120472182 - AluJo SINE Alu -8 304 122 194 0 39 0 chr10 19844583 19844609 -120472156 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1740 171 0 19 chr10 19844609 19844729 -120472036 - AluJo SINE Alu -190 122 1 1817 210 37 68 chr10 19844729 19845157 -120471608 + LTR55 LTR ERV 136 545 -3 614 200 70 1 chr10 19845432 19845572 -120471193 - MLT1A1 LTR MaLR 0 374 231 1111 153 99 10 chr10 19845729 19845931 -120470834 - MLT1A1 LTR MaLR -145 220 1 2462 303 195 26 chr10 19846545 19848316 -120468449 + L2 LINE L2 965 3046 -267 366 255 37 93 chr10 19848998 19849061 -120467704 + MIR SINE MIR 48 113 -149 2226 115 0 10 chr10 19849061 19849365 -120467400 - AluSx SINE Alu -11 301 1 366 255 37 93 chr10 19849365 19849401 -120467364 + MIR SINE MIR 113 149 -113 2096 149 131 11 chr10 19849401 19849783 -120466982 - MSTA LTR MaLR 0 428 1 366 255 37 93 chr10 19849783 19849843 -120466922 + MIR SINE MIR 149 199 -63 539 283 147 20 chr10 19850813 19851011 -120465754 + MIR SINE MIR 13 235 -27 419 297 173 40 chr10 19852763 19853452 -120463313 + L2 LINE L2 2535 3313 0 1769 161 0 17 chr10 19854475 19854797 -120461968 + AluJb SINE Alu 1 317 0 403 277 107 20 chr10 19854836 19855187 -120461578 - MLT1J LTR MaLR -63 448 6 285 237 0 17 chr10 19855192 19855251 -120461514 - L2 LINE L2 -31 3241 3184 448 357 77 21 chr10 19855370 19855572 -120461193 + L2 LINE L2 2925 3153 -119 2174 115 0 0 chr10 19855572 19855860 -120460905 - AluSx SINE Alu -24 288 1 448 357 77 21 chr10 19855860 19855982 -120460783 + L2 LINE L2 3153 3267 -5 2014 106 11 3 chr10 19856262 19856579 -120460186 + AluSq SINE Alu 1 319 0 1550 185 0 46 chr10 19857099 19857238 -120459527 + AluJo SINE Alu 1 120 -192 1972 127 0 78 chr10 19857238 19857569 -120459196 + AluSx SINE Alu 1 305 -7 1550 185 0 46 chr10 19857569 19857731 -120459034 + AluJo SINE Alu 120 288 -24 24 32 0 0 chr10 19860466 19860497 -120456268 + AT_rich Low_complexity Low_complexity 1 31 0 1457 76 0 0 chr10 19861995 19862180 -120454585 - L1MA2 LINE L1 0 6304 6120 2664 252 51 47 chr10 19862180 19862962 -120453803 - L1ME3A LINE L1 -14 6156 5368 1865 120 74 11 chr10 19862962 19863246 -120453519 - AluSg SINE Alu -8 302 1 2664 252 51 47 chr10 19863246 19863321 -120453444 - L1ME3A LINE L1 -802 5368 5295 457 329 46 20 chr10 19863391 19863644 -120453121 + MIR SINE MIR 3 261 -1 316 371 35 0 chr10 19864030 19864146 -120452619 - MIR SINE MIR -62 146 27 21 0 0 0 chr10 19864199 19864220 -120452545 + AT_rich Low_complexity Low_complexity 1 21 0 2064 116 3 3 chr10 19864422 19864716 -120452049 + AluSx SINE Alu 1 294 -18 323 192 14 0 chr10 19864784 19864857 -120451908 + (TATG)n Simple_repeat Simple_repeat 2 75 0 21 0 0 0 chr10 19865010 19865031 -120451734 + AT_rich Low_complexity Low_complexity 1 21 0 2294 121 0 0 chr10 19865139 19865446 -120451319 + AluSx SINE Alu 1 307 -5 459 245 105 7 chr10 19865715 19865858 -120450907 + MIR SINE MIR 95 251 -11 221 341 63 40 chr10 19866024 19866150 -120450615 - L2 LINE L2 -5 3267 3139 757 303 71 88 chr10 19867406 19867825 -120448940 + L2 LINE L2 2219 2621 -693 2119 176 24 11 chr10 19867825 19868195 -120448570 - THE1C LTR MaLR 0 375 1 757 303 71 88 chr10 19868195 19868525 -120448240 + L2 LINE L2 2621 2955 -359 213 346 0 25 chr10 19868632 19868713 -120448052 + L2 LINE L2 3231 3309 -4 203 88 29 0 chr10 19869822 19869856 -120446909 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 2660 116 17 8 chr10 19870320 19870681 -120446084 + THE1B LTR MaLR 1 364 0 359 323 21 53 chr10 19870683 19870872 -120445893 + MER5A DNA MER1_type 7 189 0 252 256 22 44 chr10 19871118 19871176 -120445589 - MLT1K LTR MaLR -486 102 45 233 29 0 29 chr10 19871176 19871211 -120445554 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 252 256 22 44 chr10 19871211 19871242 -120445523 - MLT1K LTR MaLR -543 45 15 1303 50 0 19 chr10 19873283 19873443 -120443322 + L1PA11 LINE L1 6017 6173 -1 21 36 0 0 chr10 19873444 19873472 -120443293 + AT_rich Low_complexity Low_complexity 1 28 0 259 212 0 91 chr10 19874330 19874396 -120442369 + AluJb SINE Alu 1 60 -242 2050 143 3 0 chr10 19874396 19874689 -120442076 - AluSx SINE Alu -18 294 1 1464 141 0 28 chr10 19874691 19874940 -120441825 + AluJb SINE Alu 52 293 -19 328 358 58 8 chr10 19875494 19875614 -120441151 - L2 LINE L2 0 3272 3147 851 151 0 0 chr10 19876007 19876126 -120440639 + FLAM_C SINE Alu 1 119 -24 21 0 0 0 chr10 19876521 19876542 -120440223 + AT_rich Low_complexity Low_complexity 1 21 0 1963 138 3 3 chr10 19876548 19876837 -120439928 + AluJb SINE Alu 5 293 -19 2042 130 3 0 chr10 19877607 19877891 -120438874 + AluSx SINE Alu 1 285 -27 560 248 177 20 chr10 19878056 19878254 -120438511 - MIR SINE MIR -5 257 29 416 322 57 11 chr10 19878285 19878462 -120438303 - MER91A DNA MER1_type -11 185 1 356 336 65 18 chr10 19878695 19878912 -120437853 - MIR SINE MIR -28 234 8 303 298 53 30 chr10 19879130 19879261 -120437504 - L2 LINE L2 -10 3303 3170 231 274 27 27 chr10 19879433 19879506 -120437259 - LTR16C LTR ERVL -14 477 405 1978 120 0 4 chr10 19879538 19879812 -120436953 + AluSx SINE Alu 33 305 -7 295 258 57 69 chr10 19880294 19880453 -120436312 + MIR SINE MIR 98 254 -8 475 141 0 0 chr10 19880552 19880623 -120436142 - THE1B LTR MaLR 0 375 305 7646 50 2 1 chr10 19880624 19881635 -120435130 + L1PA5 LINE L1 5132 6148 -6 27 0 0 0 chr10 19881869 19881896 -120434869 + AT_rich Low_complexity Low_complexity 1 27 0 2131 99 9 37 chr10 19881896 19882220 -120434545 - THE1B LTR MaLR -49 315 1 834 231 102 106 chr10 19883004 19883494 -120433271 + MLT1G1 LTR MaLR 108 595 0 745 249 95 4 chr10 19883706 19883947 -120432818 - Charlie4a DNA MER1_type -32 476 214 2549 58 0 6 chr10 19884045 19884357 -120432408 + AluY SINE Alu 2 311 0 836 225 48 5 chr10 19884523 19884732 -120432033 - Charlie4a DNA MER1_type -275 233 16 2107 134 0 0 chr10 19884856 19885148 -120431617 + AluSx SINE Alu 1 292 -20 1927 177 44 61 chr10 19885273 19885378 -120431387 - MLT1C LTR MaLR 0 467 362 2038 155 3 0 chr10 19885378 19885682 -120431083 + AluJo SINE Alu 1 305 -7 1927 177 44 61 chr10 19885682 19886051 -120430714 - MLT1C LTR MaLR -105 362 1 261 0 0 0 chr10 19886486 19886515 -120430250 + (CA)n Simple_repeat Simple_repeat 2 30 0 2074 149 0 0 chr10 19886573 19886881 -120429884 + AluSx SINE Alu 2 309 -3 2501 81 0 0 chr10 19887094 19887403 -120429362 - AluY SINE Alu -2 309 1 360 64 0 0 chr10 19887901 19887948 -120428817 + (T)n Simple_repeat Simple_repeat 1 47 0 1401 107 5 0 chr10 19887949 19888136 -120428629 - AluSx SINE Alu -124 188 1 2278 102 0 0 chr10 19890185 19890479 -120426286 + AluSg SINE Alu 1 294 -16 857 288 145 8 chr10 19892198 19892590 -120424175 - L2 LINE L2 -3 3310 2865 234 0 0 0 chr10 19893808 19893834 -120422931 + (T)n Simple_repeat Simple_repeat 1 26 0 453 290 130 10 chr10 19894628 19894835 -120421930 + MIR SINE MIR 1 232 -30 1732 156 3 45 chr10 19895072 19895380 -120421385 + AluJo SINE Alu 1 295 -17 2170 115 3 3 chr10 19895896 19896192 -120420573 + AluSq SINE Alu 1 296 -17 867 148 12 31 chr10 19896728 19896946 -120419819 + L1PA4 LINE L1 5997 6211 0 1018 165 0 0 chr10 19897329 19897487 -120419278 + AluJb SINE Alu 91 248 -64 3367 104 10 16 chr10 19897856 19898344 -120418421 + L1PB1 LINE L1 5666 6150 -1 1606 176 6 40 chr10 19898703 19899026 -120417739 + AluJo SINE Alu 1 312 0 1755 197 0 0 chr10 19899428 19899738 -120417027 - AluJo SINE Alu -2 310 1 369 302 60 20 chr10 19901119 19901268 -120415497 - Charlie8 DNA MER1_type -2260 157 3 884 122 0 0 chr10 19901341 19901464 -120415301 + FRAM SINE Alu 38 160 -16 184 301 56 28 chr10 19901583 19901726 -120415039 - L2 LINE L2 -1392 1922 1776 1979 141 3 0 chr10 19902665 19902955 -120413810 + AluSg SINE Alu 1 291 -19 351 206 206 53 chr10 19902970 19903140 -120413625 + L2 LINE L2 3117 3312 -1 2117 133 0 3 chr10 19903471 19903779 -120412986 - AluSx SINE Alu -1 311 5 945 167 10 16 chr10 19903810 19904002 -120412763 - L1PA15 LINE L1 -22 6143 5953 2261 89 7 3 chr10 19904942 19905246 -120411519 - AluSg SINE Alu -5 305 1 1500 393 3 0 chr10 19905813 19906121 -120410644 + AluSp SINE Alu 1 309 -4 1493 124 0 14 chr10 19906156 19906373 -120410392 - AluSx SINE Alu -96 216 3 238 234 74 84 chr10 19906454 19906753 -120410012 - HAL1 LINE L1 -1401 1106 811 2304 159 26 7 chr10 19906883 19907299 -120409466 - Tigger2a DNA MER2_type -8 426 3 23 0 0 0 chr10 19907844 19907867 -120408898 + AT_rich Low_complexity Low_complexity 1 23 0 189 352 74 0 chr10 19908471 19908579 -120408186 + MIR SINE MIR 147 262 0 844 219 38 9 chr10 19908756 19908966 -120407799 - MER20 DNA MER1_type 0 219 4 2055 121 0 7 chr10 19910542 19910824 -120405941 + AluSx SINE Alu 1 280 -32 266 0 0 29 chr10 19910825 19910860 -120405905 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1403 181 0 110 chr10 19910866 19911202 -120405563 + AluJo SINE Alu 1 299 -3 1326 197 138 26 chr10 19911215 19911606 -120405159 + MER63B DNA MER1_type 2 436 0 204 250 18 0 chr10 19911614 19911670 -120405095 + (TATATG)n Simple_repeat Simple_repeat 2 58 0 1607 218 6 19 chr10 19911937 19912253 -120404512 - AluJo SINE Alu 0 312 1 225 382 15 7 chr10 19912622 19912724 -120404041 + L2 LINE L2 1865 1970 -1344 2636 152 30 14 chr10 19912724 19913218 -120403547 - L1PA16 LINE L1 -1 6165 5664 225 382 15 7 chr10 19913218 19913251 -120403514 + L2 LINE L2 1970 2001 -1313 371 317 10 0 chr10 19913268 19913372 -120403393 - L2 LINE L2 0 3313 3209 6199 103 19 0 chr10 19913389 19915098 -120401667 + L1PA8 LINE L1 4412 6151 -21 38 0 0 0 chr10 19915098 19915136 -120401629 + AT_rich Low_complexity Low_complexity 1 38 0 578 274 98 8 chr10 19915228 19915483 -120401282 - L2 LINE L2 -225 3088 2811 202 156 44 0 chr10 19915801 19915846 -120400919 + (CTTTG)n Simple_repeat Simple_repeat 2 48 0 748 252 65 4 chr10 19916012 19916258 -120400507 + MIR SINE MIR 2 262 0 1670 104 0 0 chr10 19916930 19917171 -120399594 + L1MA1 LINE L1 6054 6294 -8 1871 157 0 10 chr10 19917362 19917662 -120399103 + AluJo SINE Alu 1 297 -15 25 0 0 0 chr10 19918356 19918381 -120398384 + AT_rich Low_complexity Low_complexity 1 25 0 1960 145 13 0 chr10 19918448 19918751 -120398014 - AluJo SINE Alu -5 307 1 230 327 27 36 chr10 19919780 19919890 -120396875 - L2 LINE L2 -211 3061 2953 1953 144 0 35 chr10 19920062 19920374 -120396391 + AluSx SINE Alu 1 301 -11 308 233 70 0 chr10 19920375 19920461 -120396304 - MIR SINE MIR -25 237 146 475 254 16 0 chr10 19920480 19920606 -120396159 + MER45A DNA AcHobo 46 173 -5 1776 167 0 20 chr10 19920685 19920985 -120395780 - AluJo SINE Alu -16 296 3 638 131 42 24 chr10 19920996 19921164 -120395601 + CT-rich Low_complexity Low_complexity 4 174 0 204 195 61 24 chr10 19921179 19921261 -120395504 + CT-rich Low_complexity Low_complexity 4 88 0 1484 182 38 4 chr10 19921263 19921527 -120395238 - AluJb SINE Alu -39 273 1 1981 136 0 7 chr10 19922229 19922515 -120394250 - AluJb SINE Alu -23 289 6 1986 142 3 16 chr10 19922904 19923220 -120393545 - AluSx SINE Alu 0 312 1 809 229 17 22 chr10 19923708 19923887 -120392878 + MER5B DNA MER1_type 1 178 0 272 200 171 0 chr10 19924431 19924501 -120392264 - Charlie1 DNA MER1_type -2678 83 2 204 40 0 0 chr10 19924988 19925013 -120391752 + (A)n Simple_repeat Simple_repeat 1 25 0 2120 123 0 16 chr10 19925314 19925631 -120391134 - AluSx SINE Alu 0 312 1 1572 199 36 0 chr10 19925859 19926136 -120390629 + AluJo SINE Alu 1 287 -25 2252 99 0 0 chr10 19926165 19926457 -120390308 - AluSg SINE Alu -18 292 1 2257 103 0 0 chr10 19926484 19926774 -120389991 - AluSc SINE Alu -19 290 1 897 200 0 18 chr10 19926798 19926963 -120389802 + FRAM SINE Alu 1 162 -4 215 314 121 32 chr10 19927171 19927295 -120389470 - MIR SINE MIR -58 150 16 593 321 88 25 chr10 19927376 19927983 -120388782 - L2 LINE L2 -257 3015 2264 1083 174 5 18 chr10 19930050 19930268 -120386497 - MER20 DNA MER1_type -4 215 1 207 283 221 0 chr10 19930283 19930396 -120386369 - MIR SINE MIR -6 256 119 1697 122 30 64 chr10 19930787 19931082 -120385683 + AluSx SINE Alu 5 289 -23 420 20 0 0 chr10 19931275 19931324 -120385441 + (CA)n Simple_repeat Simple_repeat 2 50 0 570 220 35 78 chr10 19931585 19931827 -120384938 - LTR37B LTR ERV1 -2 466 236 2100 136 7 3 chr10 19931827 19932128 -120384637 + AluSq SINE Alu 1 302 -11 570 220 35 78 chr10 19932128 19932167 -120384598 - LTR37B LTR ERV1 -232 236 197 365 262 35 48 chr10 19932375 19932520 -120384245 - L1ME4a LINE L1 -16 6105 5963 1484 183 98 7 chr10 19932569 19932890 -120383875 - AluJo SINE Alu 0 347 1 22 0 0 0 chr10 19933027 19933049 -120383716 + AT_rich Low_complexity Low_complexity 1 22 0 320 138 0 15 chr10 19933312 19933377 -120383388 - L1MA9 LINE L1 -34 6278 6215 * 1670 183 42 13 chr10 19933352 19933943 -120382822 + L1M2 LINE L1 4929 5535 -743 325 252 205 16 chr10 19933980 19934107 -120382658 - L1ME4a LINE L1 -287 5883 5733 448 171 18 9 chr10 19934108 19934219 -120382546 + CT-rich Low_complexity Low_complexity 1 112 0 1971 159 10 7 chr10 19934219 19934528 -120382237 - AluJo SINE Alu -2 310 1 281 289 61 18 chr10 19934613 19934727 -120382038 - L1ME4a LINE L1 -516 5654 5536 2064 128 0 0 chr10 19934727 19935017 -120381748 + AluSx SINE Alu 1 290 -22 1304 227 40 12 chr10 19935079 19935400 -120381365 - MER58B DNA MER1_type -10 331 2 238 288 96 44 chr10 19935400 19935650 -120381115 - L1M3 LINE L1 -667 5516 5254 739 163 8 0 chr10 19937832 19937955 -120378810 + FLAM_C SINE Alu 1 124 -19 215 137 0 39 chr10 19938307 19938358 -120378407 + (TATATG)n Simple_repeat Simple_repeat 4 52 0 473 295 42 6 chr10 19938843 19939009 -120377756 + MIR SINE MIR 14 185 -77 2063 109 3 11 chr10 19939857 19940140 -120376625 - AluSx SINE Alu -15 297 17 232 196 0 0 chr10 19940176 19940222 -120376543 + FLAM_C SINE Alu 114 159 0 194 83 56 0 chr10 19940254 19940290 -120376475 + A-rich Low_complexity Low_complexity 2 39 0 319 285 101 76 chr10 19940390 19940758 -120376007 - L1ME4a LINE L1 -180 5941 5565 405 124 155 21 chr10 19940992 19941089 -120375676 + LTR9B LTR ERV1 449 558 -86 2267 91 0 0 chr10 19941626 19941922 -120374843 - AluSg SINE Alu -14 296 1 1929 143 0 0 chr10 19942102 19942381 -120374384 - AluJb SINE Alu -33 279 1 1674 117 38 62 chr10 19942646 19942961 -120373804 - AluSx SINE Alu 0 308 1 216 330 26 0 chr10 19942963 19943062 -120373703 + MIR SINE MIR 52 153 -61 363 213 0 0 chr10 19943916 19943996 -120372769 + (TGGA)n Simple_repeat Simple_repeat 2 81 0 1972 107 40 0 chr10 19943998 19944270 -120372495 - AluSx SINE Alu -27 285 3 1554 188 7 11 chr10 19944306 19944583 -120372182 + AluJo SINE Alu 1 276 -36 1469 179 31 35 chr10 19945013 19945332 -120371433 + L1MB3 LINE L1 5858 6175 -8 21 36 0 0 chr10 19945397 19945425 -120371340 + AT_rich Low_complexity Low_complexity 1 28 0 2353 82 0 3 chr10 19945432 19945723 -120371042 + AluSq SINE Alu 1 290 -23 183 42 0 0 chr10 19945732 19945756 -120371009 + (TAA)n Simple_repeat Simple_repeat 2 25 0 321 291 27 27 chr10 19945756 19945898 -120370867 - MIR SINE MIR -80 182 41 633 133 0 0 chr10 19946291 19946381 -120370384 - FRAM SINE Alu -25 151 62 189 107 0 0 chr10 19946612 19946640 -120370125 + (T)n Simple_repeat Simple_repeat 1 28 0 2262 102 0 0 chr10 19948600 19948893 -120367872 + AluSg SINE Alu 2 294 -16 206 289 0 60 chr10 19949532 19949615 -120367150 + MIR SINE MIR 76 153 -109 1568 125 33 4 chr10 19950349 19950663 -120366102 + Tigger4(Zombi) DNA MER2_type 1 2725 -6 2249 113 0 6 chr10 19951093 19951404 -120365361 - AluSg1 SINE Alu 0 309 1 180 111 0 0 chr10 19951880 19951907 -120364858 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1871 175 10 0 chr10 19952095 19952398 -120364367 - AluJb SINE Alu -6 306 1 2689 26 3 0 chr10 19952407 19952711 -120364054 - AluY SINE Alu -6 305 1 434 226 105 50 chr10 19952746 19952927 -120363838 - MER20B DNA MER1_type -62 721 531 949 238 70 30 chr10 19952998 19953326 -120363439 - MER20B DNA MER1_type -381 402 62 182 347 105 32 chr10 19953406 19953501 -120363264 + L2 LINE L2 3170 3271 -1 1879 152 0 3 chr10 19953573 19953856 -120362909 - AluSx SINE Alu -30 282 1 309 300 0 0 chr10 19953857 19953937 -120362828 - L2 LINE L2 0 3313 3234 324 0 0 0 chr10 19953966 19954002 -120362763 + (TC)n Simple_repeat Simple_repeat 2 37 0 1889 154 0 7 chr10 19954686 19955004 -120361761 - AluSx SINE Alu 0 316 1 1432 95 0 5 chr10 19955033 19955222 -120361543 - L1PA7 LINE L1 0 6154 5967 246 239 70 0 chr10 19955587 19955658 -120361107 - MIR SINE MIR -85 177 102 1772 155 14 17 chr10 19955663 19955954 -120360811 - AluJo SINE Alu -22 290 1 348 287 70 0 chr10 19955968 19956083 -120360682 - MIR SINE MIR -38 224 102 1725 162 7 24 chr10 19956659 19956956 -120359809 + AluJb SINE Alu 20 311 -1 248 207 9 81 chr10 19957289 19957400 -120359365 - AluJb SINE Alu -169 133 31 1694 118 118 11 chr10 19957964 19958244 -120358521 + AluSg SINE Alu 1 310 0 276 305 62 45 chr10 19958962 19959134 -120357631 + MIR SINE MIR 3 174 -82 1884 136 13 27 chr10 19959255 19959556 -120357209 - AluSq SINE Alu -13 300 4 2160 127 3 0 chr10 19959606 19959905 -120356860 - AluSx SINE Alu -12 300 1 361 342 30 40 chr10 19960290 19960489 -120356276 - MIR3 SINE MIR -4 204 8 276 324 140 0 chr10 19960520 19960656 -120356109 + MIR3 SINE MIR 23 177 -31 2565 53 0 0 chr10 19961490 19961789 -120354976 + AluY SINE Alu 2 300 -11 1441 100 220 17 chr10 19961867 19962108 -120354657 + AluSg1 SINE Alu 1 290 -19 21 0 0 0 chr10 19962584 19962605 -120354160 + AT_rich Low_complexity Low_complexity 1 21 0 2208 123 0 0 chr10 19964928 19965228 -120351537 + AluSx SINE Alu 1 300 -12 770 153 178 13 chr10 19965342 19965499 -120351266 + MER3 DNA MER1_type 1 183 -26 315 247 27 0 chr10 19965520 19965593 -120351172 + MER5A DNA MER1_type 11 85 -104 1909 156 0 19 chr10 19965596 19965903 -120350862 - AluSx SINE Alu -11 301 1 268 296 0 0 chr10 19966138 19966226 -120350539 + (TA)n Simple_repeat Simple_repeat 2 89 0 310 241 118 59 chr10 19966231 19966401 -120350364 - L1ME LINE L1 -418 5703 5524 8071 20 0 4 chr10 19966513 19967712 -120349053 - L1PA4 LINE L1 -2 6153 4949 2090 141 3 0 chr10 19967712 19968009 -120348756 - AluSq SINE Alu -14 299 2 8071 20 0 4 chr10 19968009 19968039 -120348726 - L1PA4 LINE L1 -1206 4949 4920 291 288 247 7 chr10 19968051 19968197 -120348568 + MIR SINE MIR 82 262 0 1048 166 0 33 chr10 19968238 19968419 -120348346 - AluJo SINE Alu -137 175 1 200 274 20 0 chr10 19968542 19968593 -120348172 - L2 LINE L2 0 3313 3262 479 335 138 5 chr10 19968705 19968929 -120347836 - MIR SINE MIR -1 261 8 897 142 0 35 chr10 19969749 19969890 -120346875 + AluJo SINE Alu 1 136 -176 214 300 3 35 chr10 19970099 19970184 -120346581 - MIR3 SINE MIR -53 155 92 1287 133 36 0 chr10 19970331 19970527 -120346238 + AluJo SINE Alu 93 295 -17 4630 112 14 26 chr10 19971215 19971773 -120344992 + L1MA2 LINE L1 5561 6109 -195 2726 114 57 71 chr10 19971773 19972266 -120344499 - LTR19A LTR ERV1 0 486 1 4630 112 14 26 chr10 19972266 19972438 -120344327 + L1MA2 LINE L1 6109 6282 -22 1591 219 49 0 chr10 19972682 19973007 -120343758 - MER58B DNA MER1_type 0 341 1 1675 170 31 7 chr10 19973770 19974058 -120342707 + AluJo SINE Alu 1 295 -17 195 271 86 0 chr10 19974205 19974275 -120342490 - L2 LINE L2 -12 3301 3226 1575 142 8 132 chr10 19974445 19974506 -120342259 - L1MB3 LINE L1 -1 6182 6115 2060 132 6 6 chr10 19974506 19974817 -120341948 - AluSx SINE Alu -1 311 1 1575 142 8 132 chr10 19974817 19975009 -120341756 - L1MB3 LINE L1 -68 6115 5989 1794 174 0 4 chr10 19975009 19975290 -120341475 - AluJb SINE Alu -32 280 1 1575 142 8 132 chr10 19975290 19975415 -120341350 - L1MB3 LINE L1 -194 5989 5850 2296 114 0 0 chr10 19975751 19976059 -120340706 - AluSx SINE Alu -4 308 1 405 96 0 0 chr10 19976532 19976584 -120340181 + Alu SINE Alu 2 53 -260 379 191 191 22 chr10 19976598 19976687 -120340078 + L1ME LINE L1 5523 5626 -544 2227 94 3 3 chr10 19976713 19977011 -120339754 + AluSg SINE Alu 1 298 -12 4641 77 7 0 chr10 19977684 19978267 -120338498 - L1PA10 LINE L1 -3 6165 5579 450 277 98 36 chr10 19978548 19978772 -120337993 - L2 LINE L2 -526 2788 2551 463 256 91 35 chr10 19978812 19979011 -120337754 - L2 LINE L2 -29 3284 3075 2213 121 0 0 chr10 19979017 19979307 -120337458 - AluSx SINE Alu -22 290 1 1763 177 3 16 chr10 19979745 19980061 -120336704 + AluJb SINE Alu 1 312 0 466 227 43 64 chr10 19980237 19980300 -120336465 - MER5B DNA MER1_type -2 176 113 2113 111 17 10 chr10 19980300 19980597 -120336168 + AluSx SINE Alu 1 299 -13 466 227 43 64 chr10 19980597 19980674 -120336091 - MER5B DNA MER1_type -65 113 39 1204 95 0 85 chr10 19980775 19980964 -120335801 + AluSp SINE Alu 129 301 -12 627 277 99 52 chr10 19981042 19981616 -120335149 - L1MC4a LINE L1 -1923 5885 5261 2440 62 0 13 chr10 19981702 19982008 -120334757 - AluY SINE Alu -9 302 1 201 292 77 15 chr10 19982097 19982162 -120334603 + L2 LINE L2 3154 3222 -50 186 337 117 18 chr10 19982409 19982572 -120334193 + L2 LINE L2 2880 3058 -214 235 165 94 59 chr10 19982724 19982809 -120333956 - L2 LINE L2 -37 3276 3189 1145 208 0 0 chr10 19983051 19983267 -120333498 - AluJb SINE Alu -4 308 93 831 167 0 0 chr10 19983390 19983516 -120333249 - FLAM_C SINE Alu -17 126 1 1835 152 7 10 chr10 19984602 19984898 -120331867 - AluJo SINE Alu -17 295 1 268 217 101 39 chr10 19985312 19985441 -120331324 - L1M LINE L1 -2406 5402 5266 2188 103 0 3 chr10 19985679 19985971 -120330794 - AluSg SINE Alu -19 291 1 258 314 38 38 chr10 19986319 19986424 -120330341 - MIR SINE MIR -63 145 41 759 280 123 68 chr10 19986914 19987104 -120329661 - L2 LINE L2 0 3313 3135 2100 135 7 3 chr10 19987104 19987408 -120329357 + AluJb SINE Alu 1 305 -7 759 280 123 68 chr10 19987408 19987688 -120329077 - L2 LINE L2 -178 3135 2817 * 1389 261 55 17 chr10 19987668 19988127 -120328638 - L2 LINE L2 -1197 2117 1642 2102 116 39 0 chr10 19988386 19988671 -120328094 + AluSq SINE Alu 1 296 -17 1882 117 7 58 chr10 19989406 19989715 -120327050 - AluSg SINE Alu -17 293 1 369 245 252 7 chr10 19990080 19990227 -120326538 + MIR SINE MIR 80 262 0 206 105 26 0 chr10 19990553 19990591 -120326174 + GA-rich Low_complexity Low_complexity 2 40 0 439 315 113 70 chr10 19990638 19991038 -120325727 + L2 LINE L2 2876 3292 -21 2031 133 0 0 chr10 19991416 19991710 -120325055 - AluSx SINE Alu -12 300 7 2238 95 3 0 chr10 19991947 19992230 -120324535 - AluSx SINE Alu -28 284 1 1597 125 9 0 chr10 19992644 19992868 -120323897 + AluSx SINE Alu 1 226 -86 789 146 0 31 chr10 19992968 19993098 -120323667 - FRAM SINE Alu -21 155 30 797 127 475 12 chr10 19993100 19993359 -120323406 + LTR29 LTR ERV1 46 424 -198 788 181 58 6 chr10 19993353 19993524 -120323241 + LTR49 LTR ERV1 416 595 0 * 2709 143 46 22 chr10 19993783 19993806 -120322959 + MER4C LTR ERV1 1 22 -443 2026 127 10 0 chr10 19993806 19994105 -120322660 + AluSq SINE Alu 1 302 -11 2709 143 46 22 chr10 19994105 19994535 -120322230 + MER4C LTR ERV1 22 465 0 3820 136 20 36 chr10 19994575 19994827 -120321938 + MER41B LTR ERV1 1 255 -380 4358 116 14 31 chr10 19994827 19995004 -120321761 + MER51A LTR ERV1 1 179 -455 1960 152 0 23 chr10 19995004 19995307 -120321458 - AluSx SINE Alu -16 296 1 4358 116 14 31 chr10 19995307 19995774 -120320991 + MER51A LTR ERV1 179 634 0 3820 136 20 36 chr10 19995774 19996166 -120320599 + MER41B LTR ERV1 255 635 0 246 289 13 0 chr10 19996231 19996307 -120320458 + MIR SINE MIR 168 244 -18 2721 244 63 30 chr10 19996518 19997328 -120319437 + MER21B LTR ERV1 12 848 -15 413 147 3 0 chr10 19997620 19997693 -120319072 + MER4C LTR ERV1 389 452 -13 363 324 88 0 chr10 19997994 19998142 -120318623 - MIR3 SINE MIR -19 189 29 201 276 8 118 chr10 19998837 19998964 -120317801 + MER5A DNA MER1_type 77 189 0 241 292 81 76 chr10 19999066 19999251 -120317514 + MER5A DNA MER1_type 1 186 -3 2454 96 0 0 chr10 19999501 19999813 -120316952 + AluSx SINE Alu 1 312 0 183 147 88 0 chr10 20000312 20000346 -120316419 - MIR SINE MIR -101 161 125 2310 98 0 3 chr10 20000713 20001018 -120315747 - AluSq SINE Alu -9 304 1 268 222 65 9 chr10 20001470 20001578 -120315187 + (TATAG)n Simple_repeat Simple_repeat 2 115 0 * 312 136 57 62 chr10 20001559 20001735 -120315030 + (TA)n Simple_repeat Simple_repeat 1 175 0 678 150 0 0 chr10 20001735 20001835 -120314930 - AluS SINE Alu -211 101 2 21 0 0 0 chr10 20001929 20001950 -120314815 + AT_rich Low_complexity Low_complexity 1 21 0 244 250 0 0 chr10 20002355 20002407 -120314358 + MIR3 SINE MIR 103 154 -54 1262 153 59 21 chr10 20003022 20003258 -120313507 - AluJo SINE Alu -11 301 57 26 0 0 0 chr10 20003258 20003284 -120313481 + AT_rich Low_complexity Low_complexity 1 26 0 2068 127 4 0 chr10 20003382 20003692 -120313073 + AluSp SINE Alu 1 282 -31 1715 176 29 10 chr10 20003797 20004103 -120312662 - AluJb SINE Alu 0 312 1 2018 119 7 0 chr10 20005129 20005406 -120311359 - AluSx SINE Alu -33 279 1 1464 155 40 16 chr10 20005786 20006038 -120310727 + AluJo SINE Alu 39 296 -16 2103 132 3 0 chr10 20006299 20006603 -120310162 + AluSx SINE Alu 1 305 -7 258 300 105 32 chr10 20006812 20006934 -120309831 + L2 LINE L2 2149 2261 -1053 2203 128 0 0 chr10 20006934 20007232 -120309533 - AluSx SINE Alu -14 298 1 258 300 105 32 chr10 20007232 20007356 -120309409 + L2 LINE L2 2261 2413 -901 199 255 99 45 chr10 20007561 20007829 -120308936 - L2 LINE L2 -696 2618 2259 994 149 52 17 chr10 20007836 20008010 -120308755 - AluJ SINE Alu 0 312 133 514 309 105 41 chr10 20008137 20008549 -120308216 - L2 LINE L2 -1275 2039 1655 1386 179 12 86 chr10 20008549 20008873 -120307892 + AluJb SINE Alu 1 300 -12 514 309 105 41 chr10 20008873 20008907 -120307858 - L2 LINE L2 -1659 1655 1625 881 137 0 15 chr10 20008907 20009038 -120307727 - AluJ SINE Alu -173 129 1 514 309 105 41 chr10 20009038 20009218 -120307547 - L2 LINE L2 -1689 1625 1372 2362 110 0 0 chr10 20009223 20009533 -120307232 + AluSg SINE Alu 1 310 0 1909 147 3 7 chr10 20009725 20010010 -120306755 + AluJo SINE Alu 1 284 -28 198 0 0 0 chr10 20010493 20010515 -120306250 + (A)n Simple_repeat Simple_repeat 1 22 0 1252 119 45 15 chr10 20010581 20010783 -120305982 + MER1B DNA MER1_type 132 339 0 1941 123 55 0 chr10 20011066 20011359 -120305406 + AluSp SINE Alu 1 309 -4 1858 169 10 0 chr10 20011375 20011671 -120305094 - AluJb SINE Alu -13 299 1 210 256 0 0 chr10 20012163 20012206 -120304559 + (TATG)n Simple_repeat Simple_repeat 2 44 0 2067 124 31 0 chr10 20012264 20012555 -120304210 - AluSx SINE Alu -12 300 1 2307 103 3 0 chr10 20013215 20013516 -120303249 + AluSx SINE Alu 1 302 -10 266 313 62 18 chr10 20013765 20013877 -120302888 - L2 LINE L2 0 3313 3197 455 313 120 6 chr10 20014142 20014432 -120302333 + L2 LINE L2 2732 3053 -260 1254 186 115 0 chr10 20014440 20014693 -120302072 - AluJo SINE Alu -30 282 1 1483 214 33 52 chr10 20014750 20015114 -120301651 + MLT1A1 LTR MaLR 1 357 -8 263 299 104 7 chr10 20015117 20015271 -120301494 + L2 LINE L2 3115 3283 -30 250 336 100 0 chr10 20015301 20015411 -120301354 + L3 LINE CR1 430 550 -1027 658 266 76 55 chr10 20015552 20016079 -120300686 + MER34 LTR ERV1 1 538 -4 193 283 100 30 chr10 20016219 20016413 -120300352 + L3 LINE CR1 1151 1399 -178 2371 74 0 37 chr10 20016752 20017075 -120299690 + AluY SINE Alu 1 311 0 437 250 81 7 chr10 20017382 20017518 -120299247 + MLT1J2 LTR MaLR 1 146 -304 2359 104 3 0 chr10 20018010 20018318 -120298447 - AluSp SINE Alu -4 309 1 1517 198 14 4 chr10 20018537 20018815 -120297950 + AluJo SINE Alu 1 281 -31 332 203 0 0 chr10 20018838 20018897 -120297868 + L1MB3 LINE L1 5671 5729 -442 1735 151 14 7 chr10 20018981 20019273 -120297492 + L1MB3 LINE L1 5704 5997 -186 1116 106 65 0 chr10 20019277 20019447 -120297318 + MSTA LTR MaLR 1 181 -247 1929 141 28 3 chr10 20019447 20019738 -120297027 - AluSx SINE Alu -14 298 1 1608 153 21 24 chr10 20020871 20021159 -120295606 - AluJo SINE Alu -14 298 12 806 178 32 81 chr10 20021352 20021599 -120295166 + MER106A DNA MER1_type 2 236 0 215 350 40 0 chr10 20021850 20021950 -120294815 - L2 LINE L2 -1 3271 3168 1976 128 0 17 chr10 20021992 20022288 -120294477 + AluSx SINE Alu 1 291 -21 369 293 171 43 chr10 20022446 20022938 -120293827 - L2 LINE L2 -337 2977 2423 801 204 0 7 chr10 20023218 20023370 -120293395 + FRAM SINE Alu 1 151 -25 1390 218 3 17 chr10 20023496 20023785 -120292980 - AluJo SINE Alu -27 285 1 2113 107 12 47 chr10 20024990 20025309 -120291456 + AluSx SINE Alu 1 308 -4 340 264 182 0 chr10 20026232 20026353 -120290412 + MIR SINE MIR 41 183 -79 2511 50 10 3 chr10 20026522 20026822 -120289943 - AluY SINE Alu -7 304 3 674 242 6 0 chr10 20027227 20027384 -120289381 + MER5A DNA MER1_type 5 162 -27 2009 115 46 26 chr10 20027420 20027725 -120289040 - AluSq SINE Alu -2 311 1 878 194 6 18 chr10 20027772 20027937 -120288828 + FRAM SINE Alu 2 164 -2 891 200 0 18 chr10 20028261 20028426 -120288339 - FRAM SINE Alu -4 162 1 2094 129 0 23 chr10 20028450 20028759 -120288006 + AluSc SINE Alu 1 302 -7 1630 149 11 39 chr10 20029398 20029680 -120287085 + AluJo SINE Alu 1 274 -38 411 21 0 0 chr10 20029683 20029731 -120287034 + (CA)n Simple_repeat Simple_repeat 1 48 0 215 182 45 0 chr10 20030531 20030575 -120286190 + GA-rich Low_complexity Low_complexity 4 49 0 774 157 0 0 chr10 20030577 20030698 -120286067 - FLAM_C SINE Alu -22 121 1 1859 89 25 29 chr10 20034857 20035137 -120281628 + L1MA1 LINE L1 6017 6295 -7 28 48 0 0 chr10 20035137 20035179 -120281586 + AT_rich Low_complexity Low_complexity 1 42 0 1333 183 45 32 chr10 20036123 20036566 -120280199 - L1MB8 LINE L1 -6 6172 5597 1853 139 22 0 chr10 20036690 20036964 -120279801 + AluSx SINE Alu 1 280 -32 243 0 0 0 chr10 20036966 20036993 -120279772 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3251 132 33 4 chr10 20037353 20037832 -120278933 + MER1A DNA MER1_type 37 529 0 686 262 185 22 chr10 20038000 20038125 -120278640 - HAL1 LINE L1 -866 1641 1538 2126 135 3 0 chr10 20038125 20038436 -120278329 - AluSx SINE Alu 0 312 1 686 262 185 22 chr10 20038436 20038990 -120277775 - HAL1 LINE L1 -969 1538 851 2272 130 0 0 chr10 20039246 20039553 -120277212 - AluSx SINE Alu -5 307 1 1068 168 25 29 chr10 20039864 20040053 -120276712 - AluJo SINE Alu -10 302 113 1614 138 22 11 chr10 20040053 20040328 -120276437 + AluSq SINE Alu 24 301 -12 1068 168 25 29 chr10 20040328 20040376 -120276389 - AluJo SINE Alu -199 113 66 234 152 0 43 chr10 20040500 20040546 -120276219 - Alu SINE Alu -189 111 68 1755 194 3 13 chr10 20041011 20041326 -120275439 + AluJo SINE Alu 1 312 0 631 218 56 22 chr10 20041594 20041773 -120274992 - L1MB2 LINE L1 -36 6135 5951 451 206 21 0 chr10 20041770 20041867 -120274898 - L1MA4A LINE L1 -23 6280 6182 * 1306 158 65 1 chr10 20041875 20042238 -120274527 - L1MB1 LINE L1 -131 6052 5702 1808 140 19 0 chr10 20042240 20042505 -120274260 - AluSx SINE Alu -7 305 36 321 257 40 8 chr10 20042656 20042779 -120273986 - MIR SINE MIR -62 146 36 1798 168 20 3 chr10 20043760 20044063 -120272702 - AluJo SINE Alu -4 308 1 423 181 76 29 chr10 20044080 20044185 -120272580 - MER103 DNA DNA -2 164 55 2180 123 0 3 chr10 20044801 20045094 -120271671 - AluSx SINE Alu -20 292 1 448 321 41 14 chr10 20046206 20046427 -120270338 + MIR SINE MIR 31 257 -5 286 243 0 27 chr10 20046449 20046523 -120270242 - MIR SINE MIR -155 107 36 1210 159 10 5 chr10 20046552 20046759 -120270006 - MLT1A1 LTR MaLR -157 208 1 2183 138 0 0 chr10 20046831 20047129 -120269636 + AluSx SINE Alu 1 298 -14 936 84 0 0 chr10 20047805 20047936 -120268829 + (TA)n Simple_repeat Simple_repeat 2 132 0 2298 106 0 0 chr10 20047999 20048301 -120268464 - AluSc SINE Alu -7 302 1 2450 67 3 3 chr10 20048396 20048693 -120268072 + AluSq SINE Alu 1 297 -16 1712 169 54 10 chr10 20048925 20049221 -120267544 + AluJb SINE Alu 1 309 -3 2185 113 13 3 chr10 20049798 20050098 -120266667 + AluSg SINE Alu 1 303 -7 280 342 86 7 chr10 20050746 20050898 -120265867 - MIR SINE MIR -52 210 47 225 259 47 35 chr10 20050902 20050987 -120265778 + MER58B DNA MER1_type 255 340 -1 2149 135 0 3 chr10 20051310 20051613 -120265152 + AluSq SINE Alu 1 302 -11 328 254 108 87 chr10 20052323 20052611 -120264154 + MLT1H LTR MaLR 114 407 -142 2274 106 3 0 chr10 20052774 20053075 -120263690 + AluSx SINE Alu 1 302 -10 2065 109 0 0 chr10 20053576 20053850 -120262915 - AluSx SINE Alu -4 308 35 223 37 0 0 chr10 20054281 20054308 -120262457 + (TTTG)n Simple_repeat Simple_repeat 2 160 0 1784 103 0 0 chr10 20054308 20054540 -120262225 - AluSc SINE Alu -28 281 50 2261 109 0 0 chr10 20054651 20054973 -120261792 + MER57B LTR ERV1 1 322 -112 923 262 91 80 chr10 20055823 20056361 -120260404 - MER41C LTR ERV1 -9 545 2 971 163 43 59 chr10 20056477 20056523 -120260242 - MLT2B1 LTR ERVL 0 520 475 204 40 0 0 chr10 20056523 20056548 -120260217 + (CA)n Simple_repeat Simple_repeat 2 26 0 189 0 0 0 chr10 20056547 20056568 -120260197 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 971 163 43 59 chr10 20056548 20056961 -120259804 - MLT2B1 LTR ERVL -45 475 1 26 0 0 0 chr10 20057082 20057108 -120259657 + AT_rich Low_complexity Low_complexity 1 26 0 2256 121 0 6 chr10 20057501 20057816 -120258949 - AluSp SINE Alu 0 313 1 2019 125 7 20 chr10 20058919 20059214 -120257551 - AluSq SINE Alu -22 291 1 24 32 0 0 chr10 20060200 20060231 -120256534 + AT_rich Low_complexity Low_complexity 1 31 0 1701 204 64 9 chr10 20060351 20060787 -120255978 - MER66B LTR ERV1 0 486 27 552 279 126 10 chr10 20060902 20061300 -120255465 - L1ME3A LINE L1 -217 5936 5493 563 283 111 78 chr10 20061311 20061599 -120255166 - L1ME3A LINE L1 -748 5381 5104 1381 229 0 14 chr10 20061599 20061915 -120254850 + AluJo SINE Alu 1 312 0 563 283 111 78 chr10 20061915 20062772 -120253993 - L1ME3A LINE L1 -1025 5104 4277 701 210 0 0 chr10 20062772 20062896 -120253869 + FLAM_C SINE Alu 1 124 -9 563 283 111 78 chr10 20062896 20063170 -120253595 - L1ME3A LINE L1 -1852 4277 4013 1928 84 4 0 chr10 20063170 20063421 -120253344 - AluSp SINE Alu -13 300 49 563 283 111 78 chr10 20063421 20064036 -120252729 - L1ME3A LINE L1 -2116 4013 3278 308 255 36 31 chr10 20064202 20064394 -120252371 - L1ME3A LINE L1 -3139 2990 2798 2166 119 10 0 chr10 20064619 20064921 -120251844 + AluSx SINE Alu 1 305 -7 21 0 0 0 chr10 20064927 20064948 -120251817 + AT_rich Low_complexity Low_complexity 1 21 0 350 314 46 17 chr10 20065356 20065681 -120251084 - L1MEd LINE L1 -4762 1548 1173 927 126 0 15 chr10 20065759 20065894 -120250871 + FLAM_C SINE Alu 1 133 0 1613 158 10 38 chr10 20065921 20066212 -120250553 + AluJo SINE Alu 19 301 -11 1088 169 5 30 chr10 20066645 20066846 -120249919 + AluJb SINE Alu 89 284 -28 1609 177 10 30 chr10 20067196 20067495 -120249270 - AluJo SINE Alu -19 293 1 2208 133 0 0 chr10 20067977 20068277 -120248488 - AluSg SINE Alu -10 300 1 321 47 0 0 chr10 20068653 20068696 -120248069 + (TG)n Simple_repeat Simple_repeat 2 44 0 1641 167 11 11 chr10 20068765 20069081 -120247684 + AluJb SINE Alu 1 316 0 210 174 0 0 chr10 20069313 20069359 -120247406 + (TA)n Simple_repeat Simple_repeat 2 47 0 181 367 51 10 chr10 20069430 20069528 -120247237 - L2 LINE L2 -343 2971 2870 363 117 17 0 chr10 20069897 20069957 -120246808 - HY1 scRNA scRNA -5 107 47 369 0 0 0 chr10 20070088 20070129 -120246636 + (TTG)n Simple_repeat Simple_repeat 2 42 0 248 247 14 27 chr10 20070470 20070543 -120246222 - LTR33A LTR ERVL -8 515 444 257 192 0 0 chr10 20070718 20070770 -120245995 - Charlie1 DNA MER1_type -1 2760 2709 929 164 0 0 chr10 20070781 20070915 -120245850 - AluJo SINE Alu -178 134 1 308 247 0 0 chr10 20070919 20070996 -120245769 - Charlie1 DNA MER1_type -45 2716 2640 954 246 0 9 chr10 20071012 20071236 -120245529 - Charlie1 DNA MER1_type -2539 222 1 1952 149 0 3 chr10 20071724 20072013 -120244752 - AluJb SINE Alu -24 288 1 367 243 84 9 chr10 20073531 20073638 -120243127 - Tigger2 DNA MER2_type 0 2718 2604 331 221 0 0 chr10 20173640 20173717 -120143048 + AluSp/q SINE Alu 226 302 -1 1686 176 3 3 chr10 20173941 20174243 -120142522 + AluSx SINE Alu 1 302 -10 519 270 16 8 chr10 20174599 20174725 -120142040 - MER5A DNA MER1_type -4 185 59 3799 196 40 19 chr10 20174825 20175870 -120140895 - L1MB3 LINE L1 -67 6116 5046 1939 155 94 13 chr10 20176706 20177100 -120139665 + MSTA LTR MaLR 3 428 0 1148 221 10 31 chr10 20177883 20178172 -120138593 + AluSg SINE Alu 1 283 -17 718 164 0 31 chr10 20178589 20178717 -120138048 + FLAM_C SINE Alu 3 126 -7 21 57 0 0 chr10 20179983 20180018 -120136747 + AT_rich Low_complexity Low_complexity 1 35 0 1935 106 0 87 chr10 20180169 20180247 -120136518 + Tigger3(Golem) DNA MER2_type 2702 2785 -243 1747 146 71 10 chr10 20180247 20180541 -120136224 - AluSx SINE Alu 0 312 1 1935 106 0 87 chr10 20180541 20180555 -120136210 + Tigger3(Golem) DNA MER2_type 2785 2799 -229 2278 97 0 23 chr10 20180555 20180865 -120135900 - AluSg SINE Alu -7 303 1 1935 106 0 87 chr10 20180865 20181129 -120135636 + Tigger3(Golem) DNA MER2_type 2799 3028 0 741 263 30 26 chr10 20181163 20181395 -120135370 - MSTD LTR MaLR 0 396 164 1191 149 0 6 chr10 20181396 20181570 -120135195 + AluSx SINE Alu 2 174 -138 27 29 0 0 chr10 20181705 20181739 -120135026 + AT_rich Low_complexity Low_complexity 1 34 0 1987 119 42 0 chr10 20181912 20182198 -120134567 - AluSg SINE Alu -12 298 1 1966 128 0 30 chr10 20182561 20182857 -120133908 - AluSx SINE Alu -25 287 1 26 0 0 0 chr10 20182859 20182885 -120133880 + AT_rich Low_complexity Low_complexity 1 26 0 1327 211 78 24 chr10 20182888 20183262 -120133503 + L1MB7 LINE L1 5500 5893 -291 371 195 12 0 chr10 20183275 20183357 -120133408 - Tigger4(Zombi) DNA MER2_type -41 2690 2608 1290 141 5 14 chr10 20183861 20184074 -120132691 - AluJb SINE Alu -16 296 86 305 346 98 8 chr10 20185080 20185213 -120131552 - MIR3 SINE MIR -36 172 28 2013 153 0 13 chr10 20185464 20185777 -120130988 + AluSx SINE Alu 1 309 -3 1055 257 22 4 chr10 20186547 20186773 -120129992 + MIR SINE MIR 23 252 -10 1242 109 0 6 chr10 20186858 20187033 -120129732 - AluSg/x SINE Alu -2 308 135 1341 150 85 65 chr10 20187638 20187931 -120128834 - AluJo SINE Alu -3 299 1 773 137 12 12 chr10 20188537 20188698 -120128067 + CT-rich Low_complexity Low_complexity 4 164 0 6931 41 3 0 chr10 20188804 20189656 -120127109 + L1PA4 LINE L1 5298 6152 -3 979 116 0 12 chr10 20189673 20189837 -120126928 + L1MA1 LINE L1 6141 6302 0 1041 233 105 102 chr10 20189854 20190845 -120125920 + MER31-int LTR ERV1 1377 2370 -2566 453 203 0 0 chr10 20190871 20190950 -120125815 - FRAM/FAM SINE Alu -98 78 1 1631 160 7 14 chr10 20191271 20191546 -120125219 - AluJb SINE Alu -13 299 27 672 256 18 31 chr10 20191646 20191873 -120124892 + HAL1b LINE L1 352 575 -773 808 160 0 0 chr10 20192081 20192212 -120124553 + FLAM_C SINE Alu 1 131 -2 2186 110 10 7 chr10 20192314 20192614 -120124151 + AluSg SINE Alu 1 301 -9 264 198 0 62 chr10 20192780 20192803 -120123962 + CT-rich Low_complexity Low_complexity 3 26 -52 2106 119 0 0 chr10 20192803 20193081 -120123684 - AluSx SINE Alu -34 278 1 264 198 0 62 chr10 20193081 20193138 -120123627 + CT-rich Low_complexity Low_complexity 26 78 0 26 0 0 0 chr10 20193600 20193626 -120123139 + AT_rich Low_complexity Low_complexity 1 26 0 400 228 13 0 chr10 20194509 20194588 -120122177 + Tigger3b DNA MER2_type 1 80 -1151 1970 110 0 0 chr10 20194589 20194853 -120121912 + AluSq SINE Alu 1 264 -49 477 108 0 0 chr10 20194866 20194940 -120121825 + Alu SINE Alu 238 311 -1 3531 143 62 16 chr10 20194956 20195456 -120121309 + Tigger3b DNA MER2_type 65 610 -2418 1865 138 19 44 chr10 20195456 20195775 -120120990 + AluSx SINE Alu 1 311 -1 3531 143 62 16 chr10 20195775 20196006 -120120759 + Tigger3b DNA MER2_type 610 829 -402 5769 119 24 5 chr10 20196768 20196810 -120119955 + L1PA15 LINE L1 5128 5168 -997 231 36 0 0 chr10 20196810 20196838 -120119927 + (CAA)n Simple_repeat Simple_repeat 3 30 0 5769 119 24 5 chr10 20196838 20197810 -120118955 + L1PA15 LINE L1 5168 6165 0 1664 221 44 33 chr10 20199979 20200301 -120116464 - L1ME LINE L1 -394 5772 5455 1784 102 4 20 chr10 20200301 20200555 -120116210 + AluSq SINE Alu 55 304 -9 1664 221 44 33 chr10 20200555 20200916 -120115849 - L1ME LINE L1 -711 5455 5098 1035 259 65 24 chr10 20200922 20201258 -120115507 + L1ME1 LINE L1 5792 6141 -25 439 270 130 0 chr10 20201259 20201459 -120115306 + MLT1J2 LTR MaLR 16 241 -209 609 176 0 19 chr10 20202071 20202179 -120114586 + AluJo/FLAM SINE Alu 16 121 -191 2097 139 3 0 chr10 20202179 20202473 -120114292 - AluSx SINE Alu -17 295 1 23 33 0 0 chr10 20202474 20202504 -120114261 + AT_rich Low_complexity Low_complexity 1 30 0 308 265 128 0 chr10 20203525 20203627 -120113138 + L1MC4 LINE L1 6591 6705 -1337 1731 185 0 20 chr10 20204776 20205079 -120111686 + AluJb SINE Alu 1 297 -15 2168 115 10 0 chr10 20205803 20206099 -120110666 + AluSq SINE Alu 1 299 -14 317 83 0 21 chr10 20206264 20206312 -120110453 + AluSp SINE Alu 1 47 -252 22 0 0 0 chr10 20206649 20206671 -120110094 + AT_rich Low_complexity Low_complexity 1 22 0 1971 116 30 30 chr10 20206839 20207140 -120109625 + AluSg SINE Alu 1 301 -9 325 67 0 0 chr10 20207769 20207814 -120108951 - MADE1 DNA Mariner -2 78 34 1865 100 35 4 chr10 20207814 20208073 -120108692 + AluSp SINE Alu 34 300 -13 1930 153 33 3 chr10 20208180 20208480 -120108285 + AluJb SINE Alu 1 309 -3 263 304 71 77 chr10 20208796 20208964 -120107801 + MIR SINE MIR 3 169 -93 23 33 0 0 chr10 20209146 20209176 -120107589 + AT_rich Low_complexity Low_complexity 1 30 0 1561 158 29 73 chr10 20209996 20210198 -120106567 - MER2 DNA MER2_type -16 329 147 2023 114 47 3 chr10 20210198 20210496 -120106269 + AluSq SINE Alu 1 311 -2 1561 158 29 73 chr10 20210496 20210634 -120106131 - MER2 DNA MER2_type -198 147 4 2113 136 3 3 chr10 20211453 20211754 -120105011 - AluSx SINE Alu -11 301 1 901 236 124 4 chr10 20211757 20212032 -120104733 + MLT1B LTR MaLR 83 390 0 963 134 0 0 chr10 20212311 20212445 -120104320 + AluSg/x SINE Alu 153 286 -24 1155 142 13 36 chr10 20212455 20212788 -120103977 + LTR54 LTR ERV1 96 481 -29 2035 131 0 0 chr10 20212788 20213086 -120103679 + AluY SINE Alu 1 298 -13 1155 142 13 36 chr10 20213086 20213116 -120103649 + LTR54 LTR ERV1 481 510 0 867 237 43 26 chr10 20213165 20213397 -120103368 + MER31-int LTR ERV1 1949 2184 -4147 624 92 0 0 chr10 20213623 20213710 -120103055 + AluSg/x SINE Alu 217 303 -9 1992 125 46 0 chr10 20213962 20214243 -120102522 + AluSg SINE Alu 1 294 -16 262 297 0 27 chr10 20214255 20214329 -120102436 + MER31-int LTR ERV1 3124 3195 -4342 562 222 5 69 chr10 20214624 20214840 -120101925 + MER31-int LTR ERV1 648 849 -6688 272 218 35 46 chr10 20214915 20214992 -120101773 + MER31-int LTR ERV1 2827 2904 -3359 2435 109 0 0 chr10 20214992 20215304 -120101461 + AluSx SINE Alu 1 312 0 375 104 59 32 chr10 20215306 20215399 -120101366 + MER31-int LTR ERV1 1290 1379 -3557 557 108 81 0 chr10 20215400 20215511 -120101254 + L1MA1 LINE L1 6009 6128 -174 * 4939 41 2 0 chr10 20215508 20216148 -120100617 + L1P LINE L1 4576 5216 -930 1107 123 0 22 chr10 20216405 20216584 -120100181 + AluSg/x SINE Alu 135 309 -1 1014 264 22 4 chr10 20216665 20216892 -120099873 - MIR SINE MIR -10 252 22 249 33 0 0 chr10 20217728 20217758 -120099007 + (CA)n Simple_repeat Simple_repeat 2 31 0 340 311 19 0 chr10 20218379 20218482 -120098283 + MIR SINE MIR 127 231 -31 2382 120 92 5 chr10 20218500 20218892 -120097873 - MSTA LTR MaLR 0 428 3 343 335 37 73 chr10 20219977 20220386 -120096379 + L2 LINE L2 2863 3256 -16 1783 158 191 8 chr10 20221564 20221926 -120094839 - MSTA LTR MaLR 0 428 1 2201 128 3 0 chr10 20222596 20222902 -120093863 - AluSx SINE Alu -5 307 1 1755 244 48 56 chr10 20223054 20223644 -120093121 - MLT1E LTR MaLR -8 585 1 2109 113 26 19 chr10 20223895 20224204 -120092561 + AluSx SINE Alu 1 311 -1 696 298 51 28 chr10 20224459 20224848 -120091917 - MLT1I LTR MaLR -8 401 4 2319 46 0 7 chr10 20224889 20225197 -120091568 + AluY SINE Alu 1 306 0 2270 100 3 25 chr10 20225295 20225614 -120091151 + AluSx SINE Alu 1 312 0 243 268 306 0 chr10 20225661 20225818 -120090947 + L2 LINE L2 3037 3241 -72 468 186 207 7 chr10 20226482 20226622 -120090143 + MSTD LTR MaLR 10 177 -219 621 154 9 0 chr10 20226636 20226746 -120090019 - Alu SINE Alu 0 311 201 22 0 0 0 chr10 20227492 20227514 -120089251 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 20228329 20228350 -120088415 + AT_rich Low_complexity Low_complexity 1 21 0 228 35 0 0 chr10 20228350 20228379 -120088386 + (CA)n Simple_repeat Simple_repeat 2 30 0 1639 133 117 0 chr10 20228381 20228637 -120088128 - AluSq SINE Alu -27 286 1 2130 114 3 3 chr10 20229406 20229704 -120087061 - AluSg SINE Alu -12 298 1 30 0 0 0 chr10 20229743 20229773 -120086992 + AT_rich Low_complexity Low_complexity 1 30 0 35 0 0 0 chr10 20229997 20230032 -120086733 + AT_rich Low_complexity Low_complexity 1 35 0 2188 95 0 13 chr10 20230346 20230651 -120086114 + AluY SINE Alu 1 301 -10 1956 125 10 20 chr10 20230965 20231268 -120085497 + AluSx SINE Alu 1 300 -12 1488 170 82 0 chr10 20231821 20232103 -120084662 - AluSx SINE Alu -2 310 6 186 103 0 0 chr10 20232272 20232301 -120084464 + (TCC)n Simple_repeat Simple_repeat 2 30 0 1091 193 83 15 chr10 20232327 20232592 -120084173 - AluJo SINE Alu -19 283 1 1362 130 5 14 chr10 20233240 20233455 -120083310 + AluJb SINE Alu 86 298 -14 190 154 77 0 chr10 20233908 20233947 -120082818 - MIR SINE MIR -4 258 217 188 227 156 70 chr10 20234175 20234303 -120082462 - MIR SINE MIR 0 262 124 264 271 151 60 chr10 20234417 20234583 -120082182 + MIR SINE MIR 69 249 -13 1982 125 42 0 chr10 20236381 20236670 -120080095 - AluSx SINE Alu -11 301 1 187 313 109 47 chr10 20236671 20236799 -120079966 - MIR SINE MIR -112 150 15 243 290 240 0 chr10 20236976 20237076 -120079689 + L2 LINE L2 3190 3313 0 2235 104 0 3 chr10 20237187 20237484 -120079281 - AluSx SINE Alu -16 296 1 370 188 46 88 chr10 20237676 20237910 -120078855 + MER106A DNA MER1_type 7 236 0 1120 92 0 0 chr10 20237931 20238073 -120078692 - AluSx SINE Alu -36 276 135 1985 126 30 7 chr10 20238412 20238713 -120078052 + AluSg SINE Alu 1 308 -2 446 333 154 0 chr10 20239086 20239287 -120077478 + MIR SINE MIR 31 262 0 861 131 25 0 chr10 20240171 20240293 -120076472 - AluSx SINE Alu -187 125 1 195 100 0 0 chr10 20240456 20240486 -120076279 + (TCC)n Simple_repeat Simple_repeat 2 31 0 1273 174 87 19 chr10 20240512 20240777 -120075988 - AluJo SINE Alu -29 283 1 2266 105 0 0 chr10 20241878 20242184 -120074581 - AluSg1 SINE Alu -3 306 1 247 252 23 62 chr10 20242212 20242381 -120074384 - L1ME LINE L1 -258 5912 5754 30 0 0 0 chr10 20242616 20242646 -120074119 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr10 20245529 20245550 -120071215 + AT_rich Low_complexity Low_complexity 1 21 0 23 78 0 0 chr10 20246180 20246231 -120070534 + AT_rich Low_complexity Low_complexity 1 51 0 1465 98 29 98 chr10 20247170 20247314 -120069451 - Tigger4(Zombi) DNA MER2_type -202 2529 2377 2313 114 0 0 chr10 20247314 20247622 -120069143 - AluSx SINE Alu -4 308 1 1465 98 29 98 chr10 20247622 20247635 -120069130 - Tigger4(Zombi) DNA MER2_type -354 2377 2365 2619 39 0 13 chr10 20247635 20247943 -120068822 - AluY SINE Alu -7 304 1 1465 98 29 98 chr10 20247943 20248100 -120068665 - Tigger4(Zombi) DNA MER2_type -366 2365 2236 659 164 100 0 chr10 20248106 20248246 -120068519 - Tigger4(Zombi) DNA MER2_type -2570 161 8 814 198 139 4 chr10 20248254 20248492 -120068273 + L1MB7 LINE L1 5914 6183 -1 654 196 125 22 chr10 20249246 20249430 -120067335 + MER63A DNA MER1_type 1 203 -7 1519 210 10 3 chr10 20250420 20250711 -120066054 - AluJo SINE Alu -19 293 1 1781 170 0 26 chr10 20250824 20251135 -120065630 + AluJb SINE Alu 1 303 -9 258 268 62 77 chr10 20251296 20251568 -120065197 + L1ME4a LINE L1 5750 6017 -104 727 205 92 20 chr10 20251739 20251934 -120064831 - L1ME2 LINE L1 -13 6151 5943 566 259 88 29 chr10 20252323 20252724 -120064041 - L1MC4a LINE L1 -630 5540 5480 2103 122 0 7 chr10 20252983 20253287 -120063478 - AluSg SINE Alu -8 302 1 778 171 14 7 chr10 20253362 20253386 -120063379 - AluJo SINE Alu -171 141 119 194 0 39 0 chr10 20253386 20253412 -120063353 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 778 171 14 7 chr10 20253412 20253527 -120063238 - AluJo SINE Alu -193 119 1 207 0 0 0 chr10 20253529 20253552 -120063213 + (T)n Simple_repeat Simple_repeat 1 23 0 718 252 13 30 chr10 20253737 20253967 -120062798 - HAL1b LINE L1 -773 575 350 2133 120 7 3 chr10 20254030 20254339 -120062426 - AluSx SINE Alu -2 310 1 423 275 109 31 chr10 20254630 20254979 -120061786 - L1MC4a LINE L1 -1911 5897 5522 1639 127 0 0 chr10 20255237 20255473 -120061292 + AluSx SINE Alu 1 236 -76 1544 202 7 3 chr10 20255573 20255860 -120060905 - AluJb SINE Alu -19 293 6 26 30 0 0 chr10 20256040 20256073 -120060692 + AT_rich Low_complexity Low_complexity 1 33 0 2319 104 0 0 chr10 20256340 20256649 -120060116 - AluSc SINE Alu 0 309 1 636 142 18 0 chr10 20257459 20257572 -120059193 + FLAM_C SINE Alu 1 115 -18 207 167 0 0 chr10 20257614 20257656 -120059109 + (TGAA)n Simple_repeat Simple_repeat 3 44 0 2109 119 0 3 chr10 20259584 20259886 -120056879 - AluSx SINE Alu -10 302 2 268 312 54 57 chr10 20260481 20260765 -120056000 - L2 LINE L2 -264 3008 2737 334 204 175 39 chr10 20260895 20260998 -120055767 + MER5B DNA MER1_type 62 178 0 2324 101 3 22 chr10 20261423 20261741 -120055024 - AluSx SINE Alu 0 312 1 22 35 0 0 chr10 20261751 20261780 -120054985 + AT_rich Low_complexity Low_complexity 1 29 0 1707 146 27 0 chr10 20261780 20262040 -120054725 - AluSx SINE Alu -45 267 1 2434 70 0 3 chr10 20262285 20262587 -120054178 - AluY SINE Alu -10 301 1 1713 175 4 0 chr10 20262711 20262991 -120053774 - AluSg SINE Alu -29 281 1 657 252 0 0 chr10 20262999 20263126 -120053639 - FLAM_C SINE Alu -6 127 1 2382 94 0 3 chr10 20263169 20263477 -120053288 - AluY SINE Alu -4 307 1 989 142 47 0 chr10 20263931 20264079 -120052686 + AluJb SINE Alu 135 289 -23 865 211 76 87 chr10 20265167 20265275 -120051490 + MER39 LTR ERV1 228 336 -317 2206 135 0 0 chr10 20265275 20265579 -120051186 + AluSx SINE Alu 1 304 -8 865 211 76 87 chr10 20265579 20265943 -120050822 + MER39 LTR ERV1 336 653 0 1783 178 14 0 chr10 20266069 20266350 -120050415 + AluJo SINE Alu 1 285 -27 1065 139 18 0 chr10 20266351 20266517 -120050248 + AluSg/x SINE Alu 133 301 -11 615 332 61 40 chr10 20266517 20267016 -120049749 - L2 LINE L2 -18 3295 2778 2089 111 44 0 chr10 20267016 20267314 -120049451 - AluSq SINE Alu -2 311 1 615 332 61 40 chr10 20267314 20267458 -120049307 - L2 LINE L2 -535 2778 2638 1841 169 10 3 chr10 20268318 20268619 -120048146 - AluJo SINE Alu -9 303 1 1963 140 0 0 chr10 20269850 20270136 -120046629 - AluJb SINE Alu -26 286 1 192 315 19 0 chr10 20270157 20270211 -120046554 - L2 LINE L2 -558 2756 2702 21 36 0 0 chr10 20270851 20270879 -120045886 + AT_rich Low_complexity Low_complexity 1 28 0 292 250 12 24 chr10 20271306 20271390 -120045375 + Tigger7 DNA MER2_type 3 85 -254 276 100 0 0 chr10 20271433 20271473 -120045292 + (GGGAGA)n Simple_repeat Simple_repeat 4 43 0 1910 130 11 7 chr10 20271536 20271820 -120044945 + AluSx SINE Alu 3 287 -25 21 0 0 0 chr10 20271821 20271842 -120044923 + AT_rich Low_complexity Low_complexity 1 21 0 460 179 0 43 chr10 20272609 20272749 -120044016 + Tigger7 DNA MER2_type 2270 2403 -88 567 175 0 48 chr10 20272763 20272952 -120043813 + (TA)n Simple_repeat Simple_repeat 1 180 0 223 222 19 19 chr10 20272954 20273008 -120043757 + (TATATG)n Simple_repeat Simple_repeat 2 55 0 518 148 0 0 chr10 20273009 20273090 -120043675 + Tigger7 DNA MER2_type 2401 2481 -6 580 177 38 118 chr10 20273182 20273368 -120043397 + L1MD3 LINE L1 6800 6970 -1025 208 360 93 14 chr10 20273382 20273521 -120043244 - L2 LINE L2 -1452 1862 1713 22 0 0 0 chr10 20275477 20275499 -120041266 + AT_rich Low_complexity Low_complexity 1 22 0 436 241 38 0 chr10 20277881 20277912 -120038853 - L1MA10 LINE L1 -21 6313 6283 437 279 32 19 chr10 20277912 20278070 -120038695 - L1ME1 LINE L1 -45 6121 5962 885 229 188 17 chr10 20278106 20278399 -120038366 - MLT1D LTR MaLR -117 388 46 1400 164 13 8 chr10 20278470 20278708 -120038057 - AluJb SINE Alu -73 239 1 564 167 28 28 chr10 20279085 20279193 -120037572 - AluSx SINE Alu -85 225 118 580 40 0 0 chr10 20279200 20279274 -120037491 - AluSx SINE Alu -238 74 1 3307 125 105 66 chr10 20280044 20280709 -120036056 + LTR8 LTR ERV1 1 691 0 888 230 17 6 chr10 20281263 20281437 -120035328 + MER5A DNA MER1_type 14 189 0 2241 103 3 3 chr10 20281789 20282091 -120034674 - AluSx SINE Alu -10 302 1 2241 112 7 0 chr10 20282309 20282613 -120034152 - AluSq SINE Alu -5 308 3 2425 177 52 14 chr10 20282617 20283113 -120033652 - L1MC1 LINE L1 -5 6328 5814 277 214 14 0 chr10 20283157 20283227 -120033538 - L1ME3A LINE L1 -15 6155 6085 403 264 112 28 chr10 20283814 20283992 -120032773 + MLT1J2 LTR MaLR 254 446 -4 226 274 78 30 chr10 20284280 20284550 -120032215 - L1MEd LINE L1 -3653 2729 2447 1179 248 18 16 chr10 20284671 20285054 -120031711 + L1ME1 LINE L1 4769 5152 -994 2071 108 50 0 chr10 20285057 20285335 -120031430 - AluSp SINE Alu -21 292 1 1717 251 134 14 chr10 20285338 20286128 -120030637 + L1ME1 LINE L1 5277 6161 -5 292 328 56 7 chr10 20286195 20286479 -120030286 - L1MEd LINE L1 -4814 1570 1273 371 279 64 47 chr10 20286618 20286790 -120029975 - L1MEd LINE L1 -5934 438 264 26 0 0 0 chr10 20286843 20286869 -120029896 + AT_rich Low_complexity Low_complexity 1 26 0 32 26 0 0 chr10 20287621 20287660 -120029105 + AT_rich Low_complexity Low_complexity 1 39 0 326 41 0 41 chr10 20288915 20288964 -120027801 + (TCCCC)n Simple_repeat Simple_repeat 5 51 0 2080 121 0 0 chr10 20288966 20289246 -120027519 - AluSx SINE Alu -32 280 1 2021 148 0 7 chr10 20289369 20289666 -120027099 - AluSx SINE Alu -17 295 1 29 28 0 0 chr10 20289925 20289961 -120026804 + AT_rich Low_complexity Low_complexity 1 36 0 28 0 0 0 chr10 20290416 20290444 -120026321 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr10 20290741 20290771 -120025994 + AT_rich Low_complexity Low_complexity 1 30 0 1258 289 131 38 chr10 20290815 20290869 -120025896 + L2 LINE L2 1945 1993 -1321 2373 93 3 0 chr10 20290869 20291171 -120025594 - AluSp SINE Alu -10 303 1 1258 289 131 38 chr10 20291171 20291469 -120025296 + L2 LINE L2 1993 2262 -1052 2159 120 0 29 chr10 20291469 20291777 -120024988 - AluSx SINE Alu -13 299 1 1258 289 131 38 chr10 20291777 20292049 -120024716 + L2 LINE L2 2262 2628 -686 667 309 138 13 chr10 20292049 20292441 -120024324 - MLT1J2 LTR MaLR 0 450 10 1247 263 48 103 chr10 20292443 20292521 -120024244 + L2 LINE L2 2691 2772 -541 188 0 74 0 chr10 20292521 20292548 -120024217 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1247 263 48 103 chr10 20292548 20292674 -120024091 + L2 LINE L2 2772 2903 -410 3379 96 4 0 chr10 20292674 20293163 -120023602 - L1MA2 LINE L1 0 6304 5814 1247 263 48 103 chr10 20293163 20293390 -120023375 + L2 LINE L2 2903 3077 -236 2186 118 3 0 chr10 20293390 20293687 -120023078 - AluSq SINE Alu -15 298 1 1247 263 48 103 chr10 20293687 20293892 -120022873 + L2 LINE L2 3077 3292 -21 1776 164 90 81 chr10 20294534 20295065 -120021700 + LTR10A LTR ERV1 13 548 -61 453 68 0 68 chr10 20295145 20295187 -120021578 - THE1C LTR MaLR -306 69 33 2428 203 25 61 chr10 20295187 20295822 -120020943 + LTR9 LTR ERV1 1 612 0 453 68 0 68 chr10 20295822 20295853 -120020912 - THE1C LTR MaLR -342 33 1 260 275 175 0 chr10 20295949 20296029 -120020736 + MLT1H LTR MaLR 258 351 -198 2088 158 0 0 chr10 20297249 20297559 -120019206 - AluSx SINE Alu -2 310 1 955 129 0 0 chr10 20297562 20297694 -120019071 - AluSq/x SINE Alu -181 132 1 2042 152 0 7 chr10 20298509 20298818 -120017947 - AluJb SINE Alu -5 307 1 278 188 125 62 chr10 20299124 20299204 -120017561 + L2 LINE L2 3227 3311 -2 291 254 0 0 chr10 20299226 20299285 -120017480 - L2 LINE L2 -17 3255 3197 2063 138 3 28 chr10 20299429 20299749 -120017016 - AluSq SINE Alu -1 312 1 929 336 65 18 chr10 20300419 20300877 -120015888 + L2 LINE L2 1713 2192 -1122 2901 90 12 117 chr10 20301028 20301387 -120015378 - L1PB1 LINE L1 0 6151 5756 192 77 0 0 chr10 20301387 20301413 -120015352 + (TA)n Simple_repeat Simple_repeat 2 27 0 2901 90 12 117 chr10 20301413 20301580 -120015185 - L1PB1 LINE L1 -395 5756 5693 186 43 0 0 chr10 20301580 20301603 -120015162 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 2901 90 12 117 chr10 20301603 20301673 -120015092 - L1PB1 LINE L1 -458 5693 5617 886 340 110 26 chr10 20301678 20302246 -120014519 + L2 LINE L2 2470 3140 -173 3350 132 13 17 chr10 20302246 20302775 -120013990 - MER1A DNA MER1_type 0 527 1 886 340 110 26 chr10 20302775 20302965 -120013800 + L2 LINE L2 3140 3313 0 24 0 0 0 chr10 20303696 20303720 -120013045 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 20303760 20303782 -120012983 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 20303904 20303928 -120012837 + AT_rich Low_complexity Low_complexity 1 24 0 32 43 0 0 chr10 20304137 20304183 -120012582 + AT_rich Low_complexity Low_complexity 1 46 0 2109 114 0 23 chr10 20304369 20304676 -120012089 - AluSg SINE Alu -10 300 1 1471 297 101 26 chr10 20305710 20306703 -120010062 - L2 LINE L2 0 3313 2238 1911 142 44 25 chr10 20306736 20307103 -120009662 + THE1C LTR MaLR 1 374 -1 480 277 173 12 chr10 20307494 20307743 -120009022 - L2 LINE L2 0 3313 3025 1731 182 3 10 chr10 20308297 20308599 -120008166 - AluJo SINE Alu -12 300 1 779 148 49 0 chr10 20308806 20308948 -120007817 - L1MA3 LINE L1 0 6305 6157 2150 99 44 10 chr10 20308977 20309271 -120007494 + AluSq SINE Alu 1 304 -9 386 285 87 50 chr10 20309441 20309683 -120007082 + MIR SINE MIR 4 254 -8 4589 188 50 16 chr10 20310160 20311787 -120004978 - L1MB3 LINE L1 -2 6181 4488 2463 112 22 0 chr10 20311787 20312143 -120004622 - THE1B LTR MaLR 0 364 1 4589 188 50 16 chr10 20312143 20312325 -120004440 - L1MB3 LINE L1 -1695 4488 4314 1970 155 0 7 chr10 20312616 20312912 -120003853 - AluSx SINE Alu -18 294 1 2182 97 0 3 chr10 20312976 20313266 -120003499 - AluSq SINE Alu -24 289 1 243 394 39 0 chr10 20313298 20313402 -120003363 + MIR SINE MIR 52 159 -103 2025 140 0 10 chr10 20314604 20314912 -120001853 + AluSx SINE Alu 1 305 -7 206 309 145 65 chr10 20316095 20316496 -120000269 - L2 LINE L2 -337 2977 2545 365 49 18 35 chr10 20316509 20316569 -120000196 + AluJb SINE Alu 87 139 -163 376 221 74 156 chr10 20316609 20316853 -119999912 - MIR SINE MIR -21 241 18 866 252 116 26 chr10 20318724 20319181 -119997584 - L1ME4a LINE L1 -5 6116 5619 4050 166 20 4 chr10 20319200 20319900 -119996865 + MER50 LTR ERV1 1 711 -23 620 183 14 114 chr10 20319957 20320176 -119996589 - L1MB7 LINE L1 -66 6118 5922 1727 243 50 38 chr10 20320275 20320773 -119995992 + MLT1F LTR MaLR 38 541 -1 1167 265 121 44 chr10 20321170 20321745 -119995020 + MLT1G LTR MaLR 1 590 0 225 101 89 30 chr10 20321981 20322150 -119994615 + (TA)n Simple_repeat Simple_repeat 2 180 0 24 0 0 0 chr10 20322242 20322266 -119994499 + AT_rich Low_complexity Low_complexity 1 24 0 2184 175 40 52 chr10 20322266 20322712 -119994053 - MLT2B2 LTR ERVL -74 441 1 410 315 112 39 chr10 20322815 20323101 -119993664 - L2 LINE L2 -2 3311 3005 5204 139 14 13 chr10 20324637 20326604 -119990161 - L1PA15 LINE L1 -4 6161 4111 21 36 0 0 chr10 20326783 20326811 -119989954 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr10 20327717 20327740 -119989025 + AT_rich Low_complexity Low_complexity 1 23 0 229 229 0 16 chr10 20328357 20328418 -119988347 - LTR66 LTR ERVL -157 453 394 337 282 92 43 chr10 20329157 20329320 -119987445 + MIR3 SINE MIR 21 191 -17 228 35 0 0 chr10 20329572 20329601 -119987164 + (TTCTC)n Simple_repeat Simple_repeat 4 32 0 2258 116 0 0 chr10 20329601 20329911 -119986854 - AluSx SINE Alu -2 310 1 334 287 148 0 chr10 20329983 20330105 -119986660 - MER5A DNA MER1_type -1 188 49 2432 76 0 10 chr10 20330237 20330540 -119986225 - AluY SINE Alu -11 300 1 2329 97 57 14 chr10 20331561 20331910 -119984855 + THE1B LTR MaLR 1 364 0 275 354 30 30 chr10 20332000 20332164 -119984601 + MER5A DNA MER1_type 24 187 -2 859 199 5 0 chr10 20332559 20332755 -119984010 - L1 LINE L1 -1648 4498 4302 4309 128 15 0 chr10 20332755 20333404 -119983361 + L1PA16 LINE L1 5497 6157 -9 329 258 188 23 chr10 20333417 20333545 -119983220 + MER5B DNA MER1_type 29 177 -1 1817 145 52 55 chr10 20334074 20334439 -119982326 - THE1B LTR MaLR 0 364 1 224 324 127 70 chr10 20334453 20334595 -119982170 - L2 LINE L2 0 3272 3123 278 327 25 25 chr10 20334740 20334902 -119981863 - L2 LINE L2 -182 3090 2929 2354 97 0 13 chr10 20334987 20335298 -119981467 - AluY SINE Alu -4 307 1 23 68 0 0 chr10 20337140 20337184 -119979581 + AT_rich Low_complexity Low_complexity 1 44 0 631 294 71 5 chr10 20337369 20337580 -119979185 + L1PA16 LINE L1 2 226 -6561 1151 261 60 23 chr10 20337873 20338271 -119978494 + L1PA16 LINE L1 1267 1679 -5108 14519 223 26 18 chr10 20338285 20339961 -119976804 + L1PA16 LINE L1 1996 3657 -3160 2411 65 0 10 chr10 20339961 20340253 -119976512 + AluY SINE Alu 3 291 -20 14519 223 26 18 chr10 20340253 20343366 -119973399 + L1PA16 LINE L1 3657 6817 0 3068 194 36 58 chr10 20343482 20344277 -119972488 - L1MB8 LINE L1 -5 6173 5396 23 68 0 0 chr10 20344302 20344346 -119972419 + AT_rich Low_complexity Low_complexity 1 44 0 808 146 0 31 chr10 20345606 20345736 -119971029 - FLAM_C SINE Alu -7 126 1 872 250 97 38 chr10 20346185 20346243 -119970522 + MER45C DNA AcHobo 1 54 -899 1670 186 30 19 chr10 20346243 20346614 -119970151 - THE1C LTR MaLR 0 375 1 872 250 97 38 chr10 20346614 20346843 -119969922 + MER45C DNA AcHobo 54 305 -648 458 143 161 143 chr10 20346889 20346908 -119969857 + MER45C DNA AcHobo 783 800 -781 216 0 0 0 chr10 20346908 20346932 -119969833 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 458 143 161 143 chr10 20346932 20347080 -119969685 + MER45C DNA AcHobo 800 953 0 23 0 0 0 chr10 20347327 20347350 -119969415 + AT_rich Low_complexity Low_complexity 1 23 0 1691 197 27 0 chr10 20348948 20349248 -119967517 - AluJb SINE Alu -4 308 1 208 176 59 0 chr10 20349293 20349344 -119967421 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 180 0 0 0 chr10 20349466 20349486 -119967279 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 22 35 0 0 chr10 20349616 20349645 -119967120 + AT_rich Low_complexity Low_complexity 1 29 0 1650 177 33 10 chr10 20350875 20351180 -119965585 + AluJo SINE Alu 1 312 0 663 111 0 0 chr10 20352532 20352622 -119964143 + AluSg/x SINE Alu 208 297 -15 616 227 7 0 chr10 20352689 20352830 -119963935 - L1MA10 LINE L1 -13 6321 6180 359 169 8 34 chr10 20352851 20352969 -119963796 + CT-rich Low_complexity Low_complexity 3 117 0 1529 52 0 33 chr10 20352970 20353182 -119963583 + L1PA6 LINE L1 5950 6154 0 1708 197 72 69 chr10 20353878 20354655 -119962110 - L1MC/D LINE L1 -593 5751 4991 4185 55 21 69 chr10 20354657 20355770 -119960995 - MER11A LTR ERVK -2 1264 1 444 206 9 0 chr10 20355770 20355877 -119960888 - L1MC/D LINE L1 -1150 4996 4889 5653 237 57 19 chr10 20355979 20357845 -119958920 - L1MC/D LINE L1 -1262 4884 2949 342 80 0 0 chr10 20359003 20359053 -119957712 + (TC)n Simple_repeat Simple_repeat 2 51 0 1030 162 0 0 chr10 20359056 20359210 -119957555 - AluJb SINE Alu -23 289 136 598 233 91 28 chr10 20359845 20360021 -119956744 - MER5A DNA MER1_type -1 188 2 6592 51 6 3 chr10 20360447 20362085 -119954680 + L1PA4 LINE L1 4550 6152 -3 2305 108 3 0 chr10 20362603 20362900 -119953865 + AluSx SINE Alu 1 298 -14 414 300 90 60 chr10 20363047 20363347 -119953418 + MLT1H LTR MaLR 13 321 -228 899 261 0 0 chr10 20363393 20363569 -119953196 + MER58A DNA MER1_type 1 176 -48 412 173 205 47 chr10 20363615 20363742 -119953023 + MLT1H LTR MaLR 402 548 -1 191 345 133 0 chr10 20363856 20363969 -119952796 - MIR3 SINE MIR -4 204 77 21 36 0 0 chr10 20364343 20364371 -119952394 + AT_rich Low_complexity Low_complexity 1 28 0 491 323 117 22 chr10 20365216 20365619 -119951146 - L1M4 LINE L1 -2167 3979 3539 1083 158 42 9 chr10 20365635 20365850 -119950915 - L1PA14 LINE L1 -70 6091 5870 6429 80 7 1 chr10 20366007 20366879 -119949886 - L1PA7 LINE L1 -3 6151 5275 1109 82 0 0 chr10 20366880 20367027 -119949738 + L1PA7 LINE L1 5121 5267 -879 309 279 96 29 chr10 20367182 20367390 -119949375 - L1M4 LINE L1 -778 5368 5147 249 316 102 31 chr10 20367627 20367852 -119948913 - L1M4 LINE L1 -1343 4803 4563 352 313 147 11 chr10 20368499 20368854 -119947911 - L1MC4a LINE L1 -1878 5864 5462 28 0 0 0 chr10 20369010 20369038 -119947727 + AT_rich Low_complexity Low_complexity 1 28 0 516 275 106 88 chr10 20369165 20369231 -119947534 - L1MC4a LINE L1 -1089 4991 4928 1394 202 7 37 chr10 20369231 20369528 -119947237 - AluJo SINE Alu -23 289 2 516 275 106 88 chr10 20369528 20370140 -119946625 - L1MC4a LINE L1 -1152 4928 4301 1966 144 7 3 chr10 20371077 20371376 -119945389 - AluSx SINE Alu -12 300 1 4057 125 20 14 chr10 20372364 20373054 -119943711 + L1MA5A LINE L1 5600 6293 -4 309 277 75 75 chr10 20373102 20373290 -119943475 - L1MC4a LINE L1 -5881 189 2 30 0 0 0 chr10 20373614 20373644 -119943121 + AT_rich Low_complexity Low_complexity 1 30 0 325 291 29 39 chr10 20373841 20373944 -119942821 - MER5A DNA MER1_type -19 170 69 1671 187 0 23 chr10 20374522 20374827 -119941938 - AluJb SINE Alu -14 298 1 545 260 88 28 chr10 20375399 20375580 -119941185 + MIR SINE MIR 40 231 -31 339 339 17 0 chr10 20375629 20375744 -119941021 + MER5B DNA MER1_type 3 119 -59 269 219 110 14 chr10 20376758 20376831 -119939934 + MIR SINE MIR 90 169 -93 241 127 0 48 chr10 20376851 20376914 -119939851 + (TTTTA)n Simple_repeat Simple_repeat 1 60 0 198 174 22 22 chr10 20376918 20376964 -119939801 + MIR SINE MIR 212 257 -5 2224 120 47 33 chr10 20377506 20377865 -119938900 + THE1B LTR MaLR 1 364 0 269 246 223 31 chr10 20377951 20378081 -119938684 + LTR16C LTR ERVL 100 254 -237 381 242 45 8 chr10 20378124 20378256 -119938509 + LTR16C LTR ERVL 354 490 -1 1460 215 19 25 chr10 20378371 20378734 -119938031 + MLT1A1 LTR MaLR 1 361 -4 2050 132 0 16 chr10 20378816 20379119 -119937646 + AluSx SINE Alu 1 298 -14 432 308 98 62 chr10 20379628 20380014 -119936751 - MLT1J LTR MaLR 0 511 112 27 0 0 0 chr10 20382073 20382100 -119934665 + AT_rich Low_complexity Low_complexity 1 27 0 1792 135 48 10 chr10 20382331 20382620 -119934145 - AluSg SINE Alu -10 300 1 3705 124 0 8 chr10 20383087 20383618 -119933147 - MER1A DNA MER1_type 0 527 1 260 53 26 0 chr10 20383748 20383786 -119932979 + (TA)n Simple_repeat Simple_repeat 1 39 0 282 259 0 86 chr10 20384747 20384828 -119931937 - Tigger2a DNA MER2_type 0 444 371 1129 162 125 88 chr10 20384837 20385109 -119931656 - AluJb SINE Alu -30 282 1 181 351 120 37 chr10 20385598 20385840 -119930925 + L3b LINE CR1 1227 1488 -95 957 254 14 0 chr10 20385888 20386108 -119930657 - MER58A DNA MER1_type -1 223 1 2095 107 10 7 chr10 20386284 20386575 -119930190 - AluSq SINE Alu -21 292 1 223 329 24 12 chr10 20386647 20386729 -119930036 + L2 LINE L2 3226 3308 -5 1549 303 58 14 chr10 20387542 20388096 -119928669 + L1MEc LINE L1 70 647 -5749 604 288 87 17 chr10 20388129 20388473 -119928292 + L1MEc LINE L1 996 1363 -5033 * 4546 246 97 40 chr10 20388454 20389718 -119927047 + L1MEc LINE L1 1740 2930 -3285 1971 149 3 0 chr10 20389718 20390014 -119926751 + AluSq SINE Alu 3 299 -14 4546 246 97 40 chr10 20390014 20391292 -119925473 + L1MEc LINE L1 2930 4399 -1816 484 191 27 27 chr10 20391290 20391400 -119925365 + L1PB4 LINE L1 6045 6154 -2 * 543 261 16 49 chr10 20391412 20391596 -119925169 + L1ME2 LINE L1 5935 6112 -52 4673 231 37 100 chr10 20391631 20394218 -119922547 - L1 LINE L1 -1537 4609 2186 2121 119 3 0 chr10 20394220 20394514 -119922251 - AluSx SINE Alu -17 295 1 352 201 14 42 chr10 20395583 20395727 -119921038 + Tigger7 DNA MER2_type 2270 2409 -82 378 222 0 48 chr10 20395780 20395969 -119920796 + (TA)n Simple_repeat Simple_repeat 1 180 0 442 200 0 0 chr10 20395986 20396066 -119920699 + Tigger7 DNA MER2_type 2405 2484 -7 207 333 0 0 chr10 20396077 20396143 -119920622 + (CATATA)n Simple_repeat Simple_repeat 4 69 0 2404 241 136 36 chr10 20396159 20397122 -119919643 + L1MC4a LINE L1 6750 7808 0 300 91 0 0 chr10 20397175 20397219 -119919546 + (CA)n Simple_repeat Simple_repeat 1 44 0 690 201 0 30 chr10 20397285 20397419 -119919346 - FLAM_C SINE Alu -12 131 2 1923 160 7 0 chr10 20397450 20397744 -119919021 + AluSx SINE Alu 1 296 -16 2298 184 20 13 chr10 20397766 20398271 -119918494 + L1MC/D LINE L1 5185 5700 -633 1514 89 0 246 chr10 20398291 20398686 -119918079 + AluSq SINE Alu 1 298 -15 209 235 0 0 chr10 20400124 20400175 -119916590 + L2 LINE L2 3190 3240 -73 1944 146 3 10 chr10 20400615 20400916 -119915849 + AluJb SINE Alu 1 299 -13 285 300 18 27 chr10 20400935 20401045 -119915720 + MER5B DNA MER1_type 1 109 -69 598 144 39 0 chr10 20401381 20401485 -119915280 + L1PB1 LINE L1 75 182 -6681 * 6124 161 8 37 chr10 20401476 20403627 -119913138 + L1PB1 LINE L1 4780 6858 -9 3093 262 58 5 chr10 20404577 20405737 -119911028 - L1M4 LINE L1 -1430 4716 3496 645 161 60 7 chr10 20405737 20405886 -119910879 - L1MC3 LINE L1 -7 7778 7622 1443 250 68 71 chr10 20405890 20406494 -119910271 - LTR9B LTR ERV1 -36 608 7 1846 181 87 0 chr10 20406498 20406879 -119909886 - L1MC3 LINE L1 -1206 6579 6166 768 223 42 73 chr10 20406886 20407207 -119909558 - L1MCa LINE L1 -5058 1358 887 283 152 0 0 chr10 20407204 20407250 -119909515 - L1MDa LINE L1 -3423 3117 3072 * 1270 68 6 11 chr10 20407250 20407426 -119909339 - LTR7 LTR ERV1 -2 448 274 877 253 30 37 chr10 20407547 20407950 -119908815 - L1MDa LINE L1 -3571 2969 2570 1195 199 31 19 chr10 20407974 20408247 -119908518 - L1MB1 LINE L1 -23 6145 5897 * 1665 246 59 41 chr10 20408245 20408935 -119907830 - L1MDa LINE L1 -3950 2590 1914 2231 102 0 16 chr10 20408935 20409238 -119907527 + AluY SINE Alu 1 298 -13 1665 246 59 41 chr10 20409238 20409254 -119907511 - L1MDa LINE L1 -4626 1914 1900 1569 174 0 90 chr10 20409254 20409609 -119907156 - AluJb SINE Alu 0 312 1 1665 246 59 41 chr10 20409609 20409683 -119907082 - L1MDa LINE L1 -4640 1900 1795 1267 124 10 0 chr10 20409684 20409878 -119906887 + L1PA16 LINE L1 5859 6054 -112 186 306 50 63 chr10 20412168 20412390 -119904375 + L2 LINE L2 701 919 -2395 180 135 0 0 chr10 20412770 20412807 -119903958 + (TC)n Simple_repeat Simple_repeat 2 38 0 22 0 0 0 chr10 20412884 20412906 -119903859 + AT_rich Low_complexity Low_complexity 1 22 0 1254 162 71 12 chr10 20413045 20413298 -119903467 + AluJb SINE Alu 26 293 -19 1485 223 135 24 chr10 20414766 20415189 -119901576 + MLT1D LTR MaLR 1 479 -26 2035 114 0 0 chr10 20415189 20415500 -119901265 + AluY SINE Alu 12 322 0 1485 223 135 24 chr10 20415500 20415528 -119901237 + MLT1D LTR MaLR 479 503 -2 962 244 30 33 chr10 20415578 20415849 -119900916 + LTR46-int LTR ERV1 675 944 -4642 577 303 47 73 chr10 20415875 20416492 -119900273 + LTR46-int LTR ERV1 4242 5371 -2347 228 35 0 0 chr10 20418489 20418518 -119898247 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 972 125 0 0 chr10 20418626 20418762 -119898003 + AluSg/x SINE Alu 161 296 -16 22 0 0 0 chr10 20419181 20419203 -119897562 + AT_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr10 20419337 20419361 -119897404 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 263 300 107 29 chr10 20419690 20419830 -119896935 + MIR SINE MIR 69 219 -43 1024 298 135 27 chr10 20420629 20421470 -119895295 - L2 LINE L2 -12 3301 2379 915 197 2 14 chr10 20421523 20421539 -119895226 - L1PB3 LINE L1 0 6151 6136 372 43 0 0 chr10 20421539 20421585 -119895180 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 915 197 2 14 chr10 20421585 20421759 -119895006 - L1PB3 LINE L1 -15 6136 5964 367 211 28 0 chr10 20421800 20421909 -119894856 + (CATA)n Simple_repeat Simple_repeat 3 114 0 317 244 37 24 chr10 20422096 20422178 -119894587 - MIR SINE MIR -171 91 9 218 325 137 8 chr10 20425142 20425259 -119891506 - L2 LINE L2 -260 3053 2922 1898 155 0 7 chr10 20426306 20426610 -119890155 - AluJo SINE Alu -10 302 1 1967 176 62 36 chr10 20427413 20427799 -119888966 - MSTD LTR MaLR 0 396 1 21 0 0 0 chr10 20428027 20428048 -119888717 + AT_rich Low_complexity Low_complexity 1 21 0 916 100 0 0 chr10 20428048 20428168 -119888597 - L1MA3 LINE L1 -5 6300 6181 836 204 34 17 chr10 20429994 20430170 -119886595 + MER5A DNA MER1_type 11 189 0 813 228 28 38 chr10 20430178 20430389 -119886376 + MER3 DNA MER1_type 1 209 0 423 189 126 45 chr10 20431372 20431483 -119885282 - MIR3 SINE MIR -6 202 83 215 211 0 0 chr10 20432633 20432671 -119884094 + polypurine Low_complexity Low_complexity 3 40 0 638 129 83 76 chr10 20433095 20433227 -119883538 - FLAM_C SINE Alu 0 133 1 532 116 32 42 chr10 20433328 20433423 -119883342 - L1P LINE L1 -1552 4594 4501 1178 143 261 29 chr10 20434112 20434357 -119882408 - AluJo SINE Alu 0 302 1 1728 138 12 0 chr10 20434584 20434837 -119881928 - AluSx SINE Alu -13 299 44 434 109 62 0 chr10 20435352 20435416 -119881349 - AluJo SINE Alu -178 134 67 1746 209 63 56 chr10 20435467 20435897 -119880868 - Tigger2a DNA MER2_type 0 434 2 2314 93 0 3 chr10 20435939 20436229 -119880536 + AluY SINE Alu 1 289 -22 21 0 0 0 chr10 20437040 20437061 -119879704 + AT_rich Low_complexity Low_complexity 1 21 0 2489 85 0 0 chr10 20437957 20438263 -119878502 + AluSg SINE Alu 1 306 -4 344 179 0 0 chr10 20438275 20438331 -119878434 + AluJ/FLAM SINE Alu 2 57 -245 336 248 43 60 chr10 20438576 20438693 -119878072 + L2 LINE L2 3158 3272 0 510 58 35 11 chr10 20439710 20439797 -119876968 + (GAAA)n Simple_repeat Simple_repeat 2 90 0 1993 154 21 21 chr10 20440659 20440996 -119875769 - MER44D DNA MER2_type -2 607 1 21 0 0 0 chr10 20441099 20441120 -119875645 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 20441175 20441196 -119875569 + AT_rich Low_complexity Low_complexity 1 21 0 3033 172 4 4 chr10 20441291 20441837 -119874928 - L1P LINE L1 -1101 5045 4500 1692 150 66 4 chr10 20442267 20442541 -119874224 + AluSx SINE Alu 3 293 -19 1745 139 44 17 chr10 20443355 20443649 -119873116 - AluSg SINE Alu -8 302 1 601 290 97 13 chr10 20443676 20443914 -119872851 - MLT1L LTR MaLR -245 370 113 331 170 0 0 chr10 20444083 20444136 -119872629 - MER58A DNA MER1_type 0 224 172 1938 157 0 0 chr10 20444136 20444435 -119872330 + AluSg SINE Alu 2 300 -10 317 75 19 0 chr10 20445016 20445069 -119871696 + (TG)n Simple_repeat Simple_repeat 2 55 0 1644 43 0 0 chr10 20445099 20445286 -119871479 - L1PA6 LINE L1 0 6154 5968 2227 122 3 0 chr10 20446117 20446429 -119870336 + AluSq SINE Alu 1 313 0 1761 169 0 17 chr10 20446832 20447122 -119869643 - AluSx SINE Alu -25 287 3 301 252 208 38 chr10 20447152 20447311 -119869454 + L2 LINE L2 3123 3308 -5 2205 120 0 13 chr10 20447456 20447764 -119869001 + AluSc SINE Alu 1 304 -5 1044 191 71 0 chr10 20447955 20448165 -119868600 - MSTA LTR MaLR 0 428 204 1894 89 0 4 chr10 20449524 20449761 -119867004 - AluSq SINE Alu -77 236 1 272 234 78 0 chr10 20449924 20450001 -119866764 + LTR41 LTR ERVL 686 768 -5 2906 148 2 0 chr10 20450310 20450744 -119866021 + MER1A DNA MER1_type 59 493 -36 442 216 0 0 chr10 20450763 20450851 -119865914 - AluJ/FLAM SINE Alu -213 99 12 656 212 0 0 chr10 20450894 20451007 -119865758 + AluJb SINE Alu 186 298 -14 193 281 75 34 chr10 20451195 20451341 -119865424 + L2 LINE L2 2441 2592 -722 2966 94 3 0 chr10 20451866 20452229 -119864536 - THE1B LTR MaLR 0 364 1 1539 173 17 23 chr10 20453071 20453371 -119863394 - AluJo SINE Alu -10 302 5 365 336 54 14 chr10 20454415 20454638 -119862127 + HAL1 LINE L1 1231 1462 -1045 4186 207 59 9 chr10 20454787 20455602 -119861163 - MER21B LTR ERV1 -3 860 5 3184 195 68 17 chr10 20455604 20456261 -119860504 + MER44D DNA MER2_type 15 705 0 449 330 94 26 chr10 20456657 20456999 -119859766 + L2 LINE L2 2026 2390 -924 207 204 0 0 chr10 20458029 20458073 -119858692 + (CATATA)n Simple_repeat Simple_repeat 4 47 0 1588 109 0 0 chr10 20459460 20459662 -119857103 - AluSc SINE Alu -107 202 1 950 228 29 29 chr10 20459665 20459981 -119856784 - L1M1 LINE L1 -3954 3611 3296 382 174 12 12 chr10 20460016 20460102 -119856663 - L1MCa LINE L1 -4403 2023 1938 * 2352 215 89 19 chr10 20460099 20460727 -119856038 + L1ME1 LINE L1 5334 6005 -161 747 154 51 0 chr10 20461169 20461286 -119855479 + FLAM_A SINE Alu 1 123 -10 30 27 0 0 chr10 20461736 20461773 -119854992 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr10 20462337 20462360 -119854405 + AT_rich Low_complexity Low_complexity 1 23 0 37 23 0 0 chr10 20462625 20462669 -119854096 + AT_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr10 20462994 20463017 -119853748 + AT_rich Low_complexity Low_complexity 1 23 0 2084 120 10 3 chr10 20463438 20463737 -119853028 - AluSx SINE Alu -11 301 1 809 343 32 18 chr10 20463776 20463951 -119852814 + L2 LINE L2 925 1096 -2218 4815 60 0 2 chr10 20463951 20464539 -119852226 - LTR14C LTR ERVK 0 587 1 809 343 32 18 chr10 20464539 20464701 -119852064 + L2 LINE L2 1096 1267 -2047 242 375 91 12 chr10 20464764 20465017 -119851748 - L2 LINE L2 -810 2504 2232 1388 165 131 15 chr10 20465200 20465451 -119851314 + AluJo SINE Alu 1 286 -16 351 0 0 0 chr10 20465451 20465490 -119851275 + (CAAT)n Simple_repeat Simple_repeat 2 40 0 1388 165 131 15 chr10 20465490 20465505 -119851260 + AluJo SINE Alu 286 298 -4 292 293 93 34 chr10 20465651 20465856 -119850909 - L2 LINE L2 -1400 1914 1698 246 105 0 0 chr10 20466006 20466044 -119850721 + (GA)n Simple_repeat Simple_repeat 2 39 0 256 323 189 0 chr10 20466386 20466513 -119850252 - MIR SINE MIR 0 262 112 180 256 0 0 chr10 20466691 20466730 -119850035 - MIR SINE MIR -89 119 81 606 234 136 7 chr10 20466861 20467015 -119849750 - MIR SINE MIR -65 197 24 333 179 30 0 chr10 20468800 20468867 -119847898 - L1MA10 LINE L1 -13 6321 6253 1764 201 27 51 chr10 20469323 20469762 -119847003 - MLT2B3 LTR ERVL -134 396 1 805 274 91 87 chr10 20470073 20470590 -119846175 - L2 LINE L2 -1 3312 2799 1749 144 0 8 chr10 20470590 20470854 -119845911 - AluJo SINE Alu -14 298 37 805 274 91 87 chr10 20470854 20470947 -119845818 - L2 LINE L2 -514 2799 2708 1905 138 3 20 chr10 20470947 20471243 -119845522 - AluSx SINE Alu -21 291 1 805 274 91 87 chr10 20471243 20471467 -119845298 - L2 LINE L2 -605 2708 2472 1196 223 77 21 chr10 20471687 20472014 -119844751 - MLT1C LTR MaLR -120 347 3 1007 234 33 29 chr10 20472107 20472380 -119844385 - LTR40b LTR ERVL -52 410 137 180 0 0 0 chr10 20472678 20472698 -119844067 + (A)n Simple_repeat Simple_repeat 1 20 0 2037 142 0 0 chr10 20472718 20473020 -119843745 + AluSx SINE Alu 1 302 -10 264 333 28 9 chr10 20473070 20473178 -119843587 - MIR SINE MIR -147 115 6 2392 128 16 3 chr10 20473904 20474272 -119842493 + THE1C LTR MaLR 1 373 -2 1058 286 90 25 chr10 20474974 20475152 -119841613 - MLT1G1 LTR MaLR 0 595 430 811 164 0 0 chr10 20475152 20475280 -119841485 - FLAM_C SINE Alu -4 129 2 1058 286 90 25 chr10 20475280 20475610 -119841155 - MLT1G1 LTR MaLR -165 430 10 1680 124 0 4 chr10 20475666 20475908 -119840857 - AluSx SINE Alu -25 287 47 21 0 0 0 chr10 20476197 20476218 -119840547 + AT_rich Low_complexity Low_complexity 1 21 0 2092 160 61 27 chr10 20477127 20477632 -119839133 + MLT2A2 LTR ERVL 8 554 0 1877 152 7 3 chr10 20477975 20478265 -119838500 - AluJb SINE Alu -21 291 1 3188 90 76 0 chr10 20478700 20479187 -119837578 - L1MA3 LINE L1 -8 6297 5774 348 217 130 35 chr10 20479209 20479324 -119837441 + LTR16C LTR ERVL 366 491 0 414 228 88 15 chr10 20480495 20480631 -119836134 - MER104 DNA Tc2 -34 146 1 596 229 0 0 chr10 20481152 20481292 -119835473 - L1MD3 LINE L1 -10 7985 7846 2216 103 7 0 chr10 20481297 20481597 -119835168 + AluSx SINE Alu 5 306 -6 16844 198 36 16 chr10 20481645 20482566 -119834199 + ERVL-D LTR ERVL 176 1077 -4687 225 0 0 0 chr10 20482566 20482591 -119834174 + (TTGG)n Simple_repeat Simple_repeat 1 25 0 16844 198 36 16 chr10 20482591 20484648 -119832117 + ERVL-D LTR ERVL 1077 3314 -2450 1434 183 39 42 chr10 20484648 20484932 -119831833 - AluJb SINE Alu -29 283 1 16844 198 36 16 chr10 20484932 20485685 -119831080 + ERVL-D LTR ERVL 3314 4051 -1713 3872 169 67 11 chr10 20485689 20486422 -119830343 + ERVL-D LTR ERVL 4969 5742 -22 383 119 15 0 chr10 20486459 20486526 -119830239 + ERVL-D LTR ERVL 5681 5748 -16 1203 208 85 100 chr10 20486535 20487006 -119829759 + MLT2D LTR ERVL 1 464 0 3556 154 31 25 chr10 20487007 20487681 -119829084 - MER67C LTR ERV1 -32 678 1 312 273 62 8 chr10 20487685 20487813 -119828952 - L1ME3A LINE L1 -295 5858 5724 386 85 17 0 chr10 20487828 20487887 -119828878 + (TCC)n Simple_repeat Simple_repeat 2 61 0 465 157 0 74 chr10 20487935 20488056 -119828709 + AluSg/x SINE Alu 173 284 -25 1664 103 16 119 chr10 20488316 20488628 -119828137 - AluSx SINE Alu -32 280 1 422 301 91 13 chr10 20488640 20489025 -119827740 - L1ME3A LINE L1 -816 5313 4899 565 286 112 4 chr10 20489438 20489714 -119827051 - L1ME3A LINE L1 -4918 1201 896 43 81 0 0 chr10 20489849 20489948 -119826817 + AT_rich Low_complexity Low_complexity 1 99 0 307 197 39 39 chr10 20489951 20490129 -119826636 + (TAA)n Simple_repeat Simple_repeat 3 180 0 * 337 163 26 84 chr10 20490073 20490263 -119826502 + (TTATA)n Simple_repeat Simple_repeat 2 180 0 231 258 166 26 chr10 20490285 20490436 -119826329 - L1ME3A LINE L1 -5339 780 609 3879 48 0 0 chr10 20490700 20491183 -119825582 - L1PA4 LINE L1 0 6155 5673 346 324 32 74 chr10 20491227 20491539 -119825226 - L1ME3A LINE L1 -5818 301 3 1484 112 14 14 chr10 20492794 20493009 -119823756 + AluSg/x SINE Alu 91 305 -7 593 288 27 22 chr10 20493017 20493201 -119823564 - MIR SINE MIR -24 238 54 358 380 21 0 chr10 20493696 20493838 -119822927 - MIR3 SINE MIR -11 197 53 287 286 0 0 chr10 20494905 20494982 -119821783 - L1ME LINE L1 -426 5695 5619 2129 214 123 63 chr10 20495176 20495955 -119820810 + LTR1B LTR ERV1 1 826 0 267 278 72 0 chr10 20495960 20496057 -119820708 - MIR SINE MIR -54 208 105 394 338 122 5 chr10 20496847 20497060 -119819705 - MIR SINE MIR -13 249 12 2066 123 14 0 chr10 20497663 20497955 -119818810 + AluSx SINE Alu 1 296 -16 243 0 0 0 chr10 20498322 20498349 -119818416 + (T)n Simple_repeat Simple_repeat 1 27 0 2587 51 3 3 chr10 20498534 20498850 -119817915 + AluYb8 SINE Alu 1 316 -2 198 0 0 0 chr10 20499158 20499180 -119817585 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 901 108 0 0 chr10 20499180 20499300 -119817465 - AluSc SINE Alu -32 277 158 548 315 94 8 chr10 20499689 20499943 -119816822 + LTR33A LTR ERVL 227 502 -21 2176 188 53 2 chr10 20500051 20500488 -119816277 + MLT1C LTR MaLR 6 464 -3 1888 146 23 3 chr10 20500689 20500991 -119815774 + AluSx SINE Alu 3 310 -2 816 231 108 10 chr10 20501157 20501360 -119815405 - MER58A DNA MER1_type -1 223 1 6502 88 13 2 chr10 20501521 20502469 -119814296 + L1PA10 LINE L1 5210 6164 -4 825 293 64 45 chr10 20502497 20503087 -119813678 - L1ME3A LINE L1 -295 5875 5258 21 57 0 0 chr10 20503394 20503429 -119813336 + AT_rich Low_complexity Low_complexity 1 35 0 214 233 23 12 chr10 20503431 20503517 -119813248 + (TATAA)n Simple_repeat Simple_repeat 4 90 0 1407 298 56 38 chr10 20504496 20505227 -119811538 - L1ME3A LINE L1 -36 6945 6202 330 284 66 65 chr10 20505258 20506813 -119809952 - L1M4b LINE L1 -3892 3065 1359 25 0 0 0 chr10 20507749 20507774 -119808991 + AT_rich Low_complexity Low_complexity 1 25 0 300 303 120 17 chr10 20507882 20508057 -119808708 - MLT1E LTR MaLR -9 558 366 1493 177 44 6 chr10 20508194 20508511 -119808254 - L1MA9 LINE L1 0 6312 5984 337 317 0 4 chr10 20508515 20508598 -119808167 - MLT1E LTR MaLR -203 392 240 292 311 22 73 chr10 20508700 20508902 -119807863 + MLT1H1 LTR MaLR 66 224 -306 262 283 98 11 chr10 20509243 20509335 -119807430 + L2 LINE L2 3163 3262 -10 2038 43 51 0 chr10 20509740 20509996 -119806769 + AluY SINE Alu 43 311 0 296 330 0 43 chr10 20510021 20510115 -119806650 - L2 LINE L2 -15 3298 3209 2777 7 0 0 chr10 20510395 20510695 -119806070 - AluYa5 SINE Alu -11 300 1 559 208 0 0 chr10 20510868 20510964 -119805801 - MLT1E LTR MaLR -458 135 40 617 205 49 58 chr10 20510986 20511197 -119805568 + L1MA10 LINE L1 5985 6332 -2 22 0 0 0 chr10 20511409 20511431 -119805334 + AT_rich Low_complexity Low_complexity 1 22 0 383 293 160 13 chr10 20512090 20512246 -119804519 + MIR SINE MIR 19 176 -68 234 150 25 0 chr10 20512252 20512292 -119804473 - MER75 DNA T2_type 0 514 474 298 225 0 50 chr10 20512331 20512411 -119804354 + MIR SINE MIR 187 262 0 229 146 49 0 chr10 20512431 20512472 -119804293 - MLT2B1 LTR ERVL -7 513 471 7240 129 32 10 chr10 20512476 20513742 -119803023 + HSMAR2 DNA Mariner 5 1299 -3 1316 232 77 45 chr10 20513742 20514169 -119802596 - MLT2B1 LTR ERVL -48 472 32 306 317 25 0 chr10 20514621 20514741 -119802024 - MIR SINE MIR 0 262 140 1800 211 44 47 chr10 20515058 20515466 -119801299 - MER74A LTR ERVL -31 527 121 225 222 19 0 chr10 20515585 20515639 -119801126 - MER74B LTR ERVL -518 104 50 22 0 0 0 chr10 20517077 20517099 -119799666 + AT_rich Low_complexity Low_complexity 1 22 0 240 331 39 78 chr10 20517683 20517837 -119798928 + L2 LINE L2 2383 2530 -784 228 241 0 0 chr10 20518743 20518801 -119797964 + CT-rich Low_complexity Low_complexity 3 60 0 1255 213 37 43 chr10 20518907 20519189 -119797576 + MER58B DNA MER1_type 19 300 -2120 2379 89 0 0 chr10 20519189 20519481 -119797284 + AluSc SINE Alu 1 292 -17 1255 213 37 43 chr10 20519481 20519522 -119797243 + MER58B DNA MER1_type 300 340 -1 412 255 136 11 chr10 20519531 20519715 -119797050 + MER3 DNA MER1_type 1 207 -2 248 234 0 0 chr10 20519891 20519938 -119796827 + L2 LINE L2 3213 3259 -13 28 0 0 0 chr10 20520432 20520460 -119796305 + AT_rich Low_complexity Low_complexity 1 28 0 1044 218 116 57 chr10 20520634 20520987 -119795778 + MLT1A2 LTR MaLR 1 374 0 669 285 141 18 chr10 20521749 20522132 -119794633 - MLT1H LTR MaLR -16 533 104 326 231 145 0 chr10 20522220 20522337 -119794428 - L1MC/D LINE L1 -2001 5807 5674 2198 101 0 64 chr10 20522351 20522678 -119794087 - AluSg SINE Alu -4 306 1 239 289 24 12 chr10 20523175 20523258 -119793507 + L2 LINE L2 3227 3310 -3 1686 179 6 28 chr10 20524312 20524631 -119792134 + AluJo SINE Alu 1 312 0 22 56 0 0 chr10 20525155 20525191 -119791574 + GC_rich Low_complexity Low_complexity 1 36 0 462 79 0 0 chr10 20525515 20525578 -119791187 + (TTCC)n Simple_repeat Simple_repeat 3 65 0 2191 75 0 11 chr10 20525580 20525861 -119790904 - AluY SINE Alu -33 278 1 1730 148 11 7 chr10 20526083 20526361 -119790404 - AluJo SINE Alu -25 287 9 294 273 81 30 chr10 20526524 20526623 -119790142 - MER5A DNA MER1_type -77 112 9 478 319 34 43 chr10 20527156 20527363 -119789402 - MIR SINE MIR -44 218 14 320 299 63 32 chr10 20527666 20527887 -119788878 - L1MC4a LINE L1 -1903 5839 5612 1217 148 30 5 chr10 20528184 20528386 -119788379 - AluSg/x SINE Alu 0 312 106 432 127 0 0 chr10 20528386 20528449 -119788316 + AluS SINE Alu 18 80 -233 352 304 42 19 chr10 20528726 20528940 -119787825 - L1MC4a LINE L1 -1109 4971 4753 833 212 54 40 chr10 20528956 20529178 -119787587 - LTR40a LTR ERVL 0 519 295 833 231 57 24 chr10 20529178 20529476 -119787289 - L1MC4a LINE L1 -3161 2919 2612 435 233 78 0 chr10 20529597 20529713 -119787052 - L1MC4a LINE L1 -4633 1628 1504 1247 184 87 3 chr10 20529728 20530027 -119786738 - L1MB2 LINE L1 0 6171 5848 1010 279 50 52 chr10 20530059 20531194 -119785571 - L1ME LINE L1 -4624 1456 332 356 287 52 46 chr10 20531245 20531419 -119785346 - L1ME LINE L1 -5846 224 50 13209 137 20 2 chr10 20531440 20533530 -119783235 - Tigger1 DNA MER2_type -1 2417 291 543 226 0 0 chr10 20533532 20533638 -119783127 + AluJb SINE Alu 192 297 -15 251 226 65 0 chr10 20533638 20533700 -119783065 - Tigger1 DNA MER2_type -2127 291 226 632 162 123 84 chr10 20533703 20533857 -119782908 + AluJo SINE Alu 71 230 -82 209 30 61 0 chr10 20533892 20533925 -119782840 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1378 157 4 8 chr10 20533925 20534155 -119782610 - Tigger1 DNA MER2_type -2189 229 1 2040 111 6 47 chr10 20534529 20534870 -119781895 + L1PB1 LINE L1 5825 6151 0 256 318 0 0 chr10 20535478 20535544 -119781221 + L2 LINE L2 3236 3301 -12 2276 125 0 0 chr10 20536880 20537192 -119779573 - AluSx SINE Alu 0 312 1 954 299 108 47 chr10 20539092 20539677 -119777088 + L2 LINE L2 2372 3083 -230 2678 152 34 13 chr10 20539677 20540151 -119776614 + LTR45B LTR ERV1 3 486 -3 954 299 108 47 chr10 20540151 20540397 -119776368 + L2 LINE L2 3083 3313 0 876 185 24 175 chr10 20540575 20540733 -119776032 - L1ME2 LINE L1 0 6444 6264 4156 149 29 27 chr10 20540733 20541516 -119775249 - LTR1 LTR ERV1 0 785 1 876 185 24 175 chr10 20541516 20541794 -119774971 - L1ME2 LINE L1 -180 6264 6093 2490 54 0 0 chr10 20541794 20542088 -119774677 - AluY SINE Alu -17 294 1 876 185 24 175 chr10 20542088 20542158 -119774607 - L1ME2 LINE L1 -351 6093 6014 344 187 40 0 chr10 20542152 20542227 -119774538 - L1M4 LINE L1 -3400 2746 2669 * 687 234 65 15 chr10 20542213 20543185 -119773580 - L1ME2 LINE L1 -434 6010 4868 363 234 40 16 chr10 20543181 20543305 -119773460 - L1ME2 LINE L1 -3400 3026 2900 * 260 182 117 13 chr10 20543349 20543384 -119773381 - L1ME2 LINE L1 -5543 883 853 486 0 0 0 chr10 20543384 20543438 -119773327 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 260 182 117 13 chr10 20543438 20543479 -119773286 - L1ME2 LINE L1 -5573 853 799 311 140 18 18 chr10 20543480 20543537 -119773228 + LTR45 LTR ERV1 469 525 0 1398 207 17 20 chr10 20543545 20543845 -119772920 - L1ME2 LINE L1 -5628 798 500 804 209 87 6 chr10 20543842 20544014 -119772751 - L1ME2 LINE L1 -6220 206 21 * 841 268 55 99 chr10 20544001 20545103 -119771662 - L1ME LINE L1 -4983 1087 102 3786 175 43 7 chr10 20545119 20545799 -119770966 + MER44D DNA MER2_type 1 704 -1 1110 204 57 92 chr10 20545812 20546180 -119770585 + MLT1C LTR MaLR 113 467 0 423 174 0 0 chr10 20546180 20546266 -119770499 + (CA)n Simple_repeat Simple_repeat 1 86 0 896 218 35 123 chr10 20546814 20547214 -119769551 + MLT1A1 LTR MaLR 1 365 0 187 333 35 0 chr10 20547498 20547585 -119769180 - L2 LINE L2 -234 3079 2990 237 313 40 10 chr10 20547691 20547790 -119768975 - L2 LINE L2 -517 2797 2696 760 123 0 8 chr10 20547790 20547920 -119768845 - L1P LINE L1 -1440 4706 4578 2812 77 0 0 chr10 20547920 20548278 -119768487 + L1PA7 LINE L1 5785 6147 -7 473 165 44 0 chr10 20548296 20548387 -119768378 - L1MA7 LINE L1 -370 5942 5848 1384 141 55 108 chr10 20548388 20548750 -119768015 + L1MA7 LINE L1 5939 6281 -10 1340 280 32 62 chr10 20549325 20549860 -119766905 - LTR40a LTR ERVL 0 519 1 506 317 115 16 chr10 20550846 20551212 -119765553 - L2 LINE L2 0 3313 2912 294 217 117 50 chr10 20551260 20551380 -119765385 - MIR SINE MIR -46 216 89 1617 200 35 17 chr10 20551530 20551875 -119764890 - MLT1A2 LTR MaLR -20 354 4 377 340 151 28 chr10 20552038 20552329 -119764436 + L2 LINE L2 2946 3272 0 291 206 32 0 chr10 20552328 20552391 -119764374 + MIR SINE MIR 86 150 -112 * 2465 40 3 3 chr10 20553098 20553394 -119763371 - AluYa5 SINE Alu -15 296 1 559 208 0 0 chr10 20553567 20553663 -119763102 - MLT1E LTR MaLR -458 135 40 617 205 49 58 chr10 20553685 20553896 -119762869 + L1MA10 LINE L1 5985 6332 -2 22 0 0 0 chr10 20554108 20554130 -119762635 + AT_rich Low_complexity Low_complexity 1 22 0 371 301 160 13 chr10 20554789 20554945 -119761820 + MIR SINE MIR 19 176 -68 2206 209 63 70 chr10 20556425 20557080 -119759685 - MER82 DNA MER2_type -1 652 3 2290 78 19 29 chr10 20557583 20557890 -119758875 - AluSx SINE Alu -8 304 1 392 273 144 62 chr10 20558417 20558916 -119757849 + MLT1K LTR MaLR 10 580 -8 1845 172 0 3 chr10 20559144 20559435 -119757330 - AluSx SINE Alu -20 292 3 32 0 0 0 chr10 20559448 20559480 -119757285 + AT_rich Low_complexity Low_complexity 1 32 0 218 238 48 48 chr10 20560541 20560625 -119756140 - MIR3 SINE MIR -4 204 121 2074 129 7 7 chr10 20560698 20561007 -119755758 - AluSx SINE Alu -3 309 1 323 210 10 70 chr10 20561012 20561112 -119755653 - HAL1 LINE L1 -1 2506 2413 691 280 106 0 chr10 20561403 20561667 -119755098 - HAL1 LINE L1 -651 1856 1565 1850 218 23 5 chr10 20561688 20562083 -119754682 - MER65C LTR ERV1 0 461 60 270 325 65 41 chr10 20562083 20562496 -119754269 - HAL1 LINE L1 -1381 1126 704 1134 243 15 53 chr10 20562496 20562837 -119753928 + MLT2C1 LTR ERVL 1 328 -69 396 290 57 105 chr10 20563012 20563346 -119753419 - HAL1 LINE L1 -2167 340 23 1931 112 65 7 chr10 20563387 20563685 -119753080 - AluSx SINE Alu 0 312 1 1705 278 33 21 chr10 20564965 20565537 -119751228 - MLT1H1 LTR MaLR 0 555 1 285 322 91 50 chr10 20565548 20565747 -119751018 + MIR SINE MIR 56 262 0 2308 112 12 0 chr10 20565761 20566083 -119750682 - THE1B LTR MaLR -6 358 33 9493 108 11 39 chr10 20566083 20567528 -119749237 - THE1B-int LTR MaLR -52 1528 124 3051 47 3 3 chr10 20567529 20567911 -119748854 - L1PA5 LINE L1 -3 6151 5770 810 77 0 0 chr10 20567911 20568015 -119748750 - AluY SINE Alu -8 303 200 40 67 0 0 chr10 20568572 20568647 -119748118 + AT_rich Low_complexity Low_complexity 1 75 0 22 88 0 0 chr10 20570010 20570067 -119746698 + AT_rich Low_complexity Low_complexity 1 57 0 827 326 34 17 chr10 20570133 20570489 -119746276 - MLT1K LTR MaLR -85 503 142 184 315 54 117 chr10 20570676 20570762 -119746003 - L2 LINE L2 -7 3265 3175 2625 156 30 6 chr10 20570762 20571230 -119745535 + L1PA16 LINE L1 5687 6165 -1 184 315 54 117 chr10 20571230 20571476 -119745289 - L2 LINE L2 -97 3175 2954 2050 93 4 0 chr10 20572084 20572352 -119744413 + AluSg SINE Alu 41 309 -1 1070 249 114 38 chr10 20572656 20573215 -119743550 - HAL1 LINE L1 -424 2083 1482 241 207 0 17 chr10 20573239 20573297 -119743468 + (TA)n Simple_repeat Simple_repeat 1 57 0 1109 190 89 68 chr10 20573300 20573694 -119743071 - L1MC4 LINE L1 0 8042 7641 818 219 59 83 chr10 20573783 20574291 -119742474 - HAL1 LINE L1 -1144 1363 868 603 303 98 94 chr10 20574294 20574805 -119741960 - LTR33 LTR ERVL -8 513 1 248 317 37 0 chr10 20574805 20574887 -119741878 - HAL1 LINE L1 -1635 872 788 1619 188 14 10 chr10 20575030 20575322 -119741443 - AluJo SINE Alu -14 298 6 320 269 23 85 chr10 20575427 20575557 -119741208 - HAL1 LINE L1 -2295 212 91 771 222 71 10 chr10 20577066 20577264 -119739501 - MER63A DNA MER1_type 0 210 1 1272 146 20 185 chr10 20577270 20577675 -119739090 - MER44D DNA MER2_type -1 608 1 22926 52 3 1 chr10 20578082 20581786 -119734979 - L1PA5 LINE L1 0 6154 2442 470 320 74 22 chr10 20582374 20582643 -119734122 - ERVL LTR ERVL -3048 2716 2434 627 245 112 65 chr10 20582648 20582926 -119733839 + ERVL LTR ERVL 3285 3575 -2189 2973 112 13 7 chr10 20583209 20583663 -119733102 - L1PA10 LINE L1 -1 6167 5711 274 210 61 99 chr10 20583785 20583966 -119732799 - L1MEc LINE L1 -4839 1906 1733 225 226 23 45 chr10 20584006 20584183 -119732582 + (TTTA)n Simple_repeat Simple_repeat 1 173 0 * 329 199 38 15 chr10 20584060 20584191 -119732574 + (TA)n Simple_repeat Simple_repeat 2 135 0 2018 120 17 7 chr10 20584279 20584579 -119732186 - AluSq SINE Alu -10 303 1 239 281 68 55 chr10 20584585 20585040 -119731725 - L1MEc LINE L1 -5026 1528 1068 2074 134 0 3 chr10 20585663 20585961 -119730804 - AluSx SINE Alu -15 297 1 272 198 30 10 chr10 20586509 20586610 -119730155 + CT-rich Low_complexity Low_complexity 3 105 0 260 192 0 154 chr10 20586874 20586978 -119729787 - L2 LINE L2 -1 3271 3184 527 260 35 40 chr10 20587148 20587348 -119729417 - L1MA9 LINE L1 -49 6263 6065 2022 106 7 0 chr10 20587348 20587622 -119729143 - AluSg SINE Alu -11 299 24 1574 220 27 11 chr10 20587642 20588010 -119728755 + L1MA9 LINE L1 5710 6083 -229 260 331 69 15 chr10 20588096 20588226 -119728539 - L2 LINE L2 -178 3094 2958 318 308 0 45 chr10 20588537 20588670 -119728095 - L2 LINE L2 -839 2475 2349 288 53 0 0 chr10 20588695 20588733 -119728032 + (TG)n Simple_repeat Simple_repeat 2 39 0 198 395 122 6 chr10 20589491 20589663 -119727102 + MIR3 SINE MIR 16 207 -1 2844 3 0 0 chr10 20591420 20591726 -119725039 - AluYa5 SINE Alu -5 306 1 212 260 27 27 chr10 20594578 20594651 -119722114 + MIR SINE MIR 75 147 -61 29 47 0 0 chr10 20595496 20595539 -119721226 + AT_rich Low_complexity Low_complexity 1 43 0 26456 98 16 5 chr10 20595660 20600375 -119716390 - L1PA7 LINE L1 0 6154 1395 1879 214 5 22 chr10 20600364 20600775 -119715990 - L1MEc LINE L1 -5128 917 514 * 21 0 0 0 chr10 20600962 20600983 -119715782 + AT_rich Low_complexity Low_complexity 1 21 0 231 337 166 5 chr10 20601433 20601626 -119715139 + L2 LINE L2 2616 2839 -475 257 287 191 0 chr10 20601894 20602009 -119714756 + L2 LINE L2 3134 3270 -2 348 117 17 0 chr10 20602115 20602175 -119714590 - L1MB5 LINE L1 -7 6167 6107 1398 192 27 69 chr10 20602207 20602582 -119714183 - L1MB5 LINE L1 -33 6141 5783 402 143 33 0 chr10 20603169 20603260 -119713505 + (TA)n Simple_repeat Simple_repeat 2 95 0 317 148 45 40 chr10 20603319 20603495 -119713270 + (TA)n Simple_repeat Simple_repeat 1 177 0 456 308 0 0 chr10 20603821 20603941 -119712824 + MER58B DNA MER1_type 222 341 0 180 111 0 0 chr10 20605864 20605891 -119710874 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 261 0 0 0 chr10 20606641 20606670 -119710095 + (TA)n Simple_repeat Simple_repeat 2 30 0 315 0 0 0 chr10 20606670 20606705 -119710060 + (T)n Simple_repeat Simple_repeat 1 35 0 1657 156 0 53 chr10 20606805 20607087 -119709678 - AluJo SINE Alu -45 267 1 445 268 168 6 chr10 20607093 20607272 -119709493 + L2 LINE L2 2004 2211 -1103 24 32 0 0 chr10 20608238 20608269 -119708496 + AT_rich Low_complexity Low_complexity 1 31 0 756 263 84 5 chr10 20608826 20609092 -119707673 - MER110A LTR ERV1 0 468 213 1973 102 0 7 chr10 20609491 20609776 -119706989 - L1PA8 LINE L1 -3 6169 5887 1877 47 0 0 chr10 20609776 20610009 -119706756 + L1PA8 LINE L1 5653 5885 -287 492 328 110 60 chr10 20610061 20610468 -119706297 - L3 LINE CR1 -166 1411 971 2035 129 17 0 chr10 20610468 20610755 -119706010 + AluSx SINE Alu 6 297 -15 492 328 110 60 chr10 20610755 20610866 -119705899 - L3 LINE CR1 -606 971 867 447 313 95 29 chr10 20610873 20611116 -119705649 + MIR SINE MIR 3 261 -1 613 294 14 32 chr10 20611397 20611615 -119705150 - MER58C DNA MER1_type 0 215 2 2510 55 3 3 chr10 20612073 20612380 -119704385 + AluY SINE Alu 1 307 -4 23 54 0 0 chr10 20612431 20612468 -119704297 + AT_rich Low_complexity Low_complexity 1 37 0 1980 124 0 17 chr10 20613122 20613420 -119703345 + AluSc SINE Alu 1 293 -16 1322 87 19 29 chr10 20613854 20614060 -119702705 - AluY SINE Alu -107 204 1 4309 47 3 2 chr10 20614060 20614719 -119702046 - L1P2 LINE L1 -368 5786 5127 * 5159 69 0 30 chr10 20614717 20615429 -119701336 + L1P2 LINE L1 4437 5127 -1019 888 114 0 0 chr10 20615426 20615557 -119701208 - THE1B-int LTR MaLR -1449 131 1 * 2583 110 6 6 chr10 20615557 20615921 -119700844 - THE1B LTR MaLR 0 364 1 775 274 90 0 chr10 20616183 20616417 -119700348 - MIR SINE MIR 0 262 8 1935 81 25 7 chr10 20616578 20616862 -119699903 + L1MA1 LINE L1 6014 6302 0 21 57 0 0 chr10 20617220 20617255 -119699510 + AT_rich Low_complexity Low_complexity 1 35 0 35528 38 25 2 chr10 20617384 20622835 -119693930 + L1PA3 LINE L1 567 6151 -4 25 0 0 0 chr10 20622835 20622860 -119693905 + AT_rich Low_complexity Low_complexity 1 25 0 288 279 29 0 chr10 20623094 20623198 -119693567 - L1ME LINE L1 -5961 109 3 647 192 47 131 chr10 20623219 20623439 -119693326 - L1MA10 LINE L1 -1 6333 6143 2240 118 6 6 chr10 20623439 20623752 -119693013 + AluSp SINE Alu 1 313 0 647 192 47 131 chr10 20623752 20623828 -119692937 - L1MA10 LINE L1 -191 6143 6062 752 163 20 0 chr10 20623945 20624092 -119692673 - L1MB1 LINE L1 -140 6049 5900 * 1203 183 28 16 chr10 20624089 20624371 -119692394 + L1MB1 LINE L1 5643 5933 -233 25 31 0 0 chr10 20624430 20624462 -119692303 + AT_rich Low_complexity Low_complexity 1 32 0 1584 206 0 0 chr10 20624463 20624750 -119692015 - AluJb SINE Alu -25 287 1 234 0 0 0 chr10 20624989 20625015 -119691750 + (TG)n Simple_repeat Simple_repeat 2 27 0 239 328 58 32 chr10 20625326 20625515 -119691250 - MLT1K LTR MaLR -18 570 377 404 140 11 0 chr10 20626145 20626238 -119690527 + (TCTA)n Simple_repeat Simple_repeat 1 94 0 596 204 0 0 chr10 20626256 20626364 -119690401 + FLAM_C SINE Alu 24 131 -12 430 270 6 0 chr10 20626369 20626547 -119690218 + (TA)n Simple_repeat Simple_repeat 2 180 0 200 211 0 53 chr10 20626657 20626714 -119690051 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 21 36 0 0 chr10 20627546 20627574 -119689191 + AT_rich Low_complexity Low_complexity 1 28 0 225 375 27 43 chr10 20627997 20628105 -119688660 + MIR SINE MIR 45 150 -112 2194 120 0 0 chr10 20628105 20628396 -119688369 + AluSx SINE Alu 5 295 -17 225 375 27 43 chr10 20628396 20628496 -119688269 + MIR SINE MIR 150 250 -12 5435 40 0 0 chr10 20628676 20629359 -119687406 + L1PA5 LINE L1 5494 6176 0 405 226 274 0 chr10 20630575 20630721 -119686044 - MER5A DNA MER1_type -3 186 1 438 216 138 52 chr10 20630778 20631010 -119685755 - MLT1L LTR MaLR -40 575 324 222 118 0 0 chr10 20631215 20631249 -119685516 + (TTCC)n Simple_repeat Simple_repeat 1 34 0 1084 110 51 11 chr10 20631250 20631459 -119685306 - MLT2A2 LTR ERVL 0 453 292 2392 43 43 16 chr10 20632446 20632749 -119684016 - AluY SINE Alu 0 311 1 367 77 0 0 chr10 20632937 20632989 -119683776 - Alu SINE Alu -9 293 242 588 280 16 54 chr10 20633028 20633214 -119683551 + MIR SINE MIR 18 196 -66 2201 83 4 0 chr10 20633265 20633543 -119683222 - AluY SINE Alu -16 295 17 4962 207 49 24 chr10 20633764 20636276 -119680489 - L1MC1 LINE L1 0 6613 4027 1442 208 65 70 chr10 20636298 20636669 -119680096 - L1MC1 LINE L1 -3915 2692 2320 372 59 0 0 chr10 20636669 20636720 -119680045 + (TA)n Simple_repeat Simple_repeat 2 52 0 1442 208 65 70 chr10 20636720 20637543 -119679222 - L1MC1 LINE L1 -4287 2320 1461 862 161 0 0 chr10 20637584 20637714 -119679051 - FLAM_C SINE Alu -3 130 1 2117 108 6 0 chr10 20638495 20638820 -119677945 - pTR5 LTR ERV1 -2046 392 66 281 245 31 20 chr10 20638820 20638918 -119677847 - LTR30 LTR ERV1 -80 642 544 2042 211 43 103 chr10 20638922 20639783 -119676982 - pTR5 LTR ERV1 -417 2021 743 209 367 41 10 chr10 20640098 20640196 -119676569 + L2 LINE L2 3171 3271 -1 30 0 0 0 chr10 20640411 20640441 -119676324 + AT_rich Low_complexity Low_complexity 1 30 0 1971 108 0 7 chr10 20640510 20640779 -119675986 - AluSc SINE Alu -8 301 35 187 263 0 0 chr10 20640885 20640923 -119675842 - L2 LINE L2 -11 3302 3265 21 0 0 0 chr10 20640984 20641005 -119675760 + AT_rich Low_complexity Low_complexity 1 21 0 1470 197 16 68 chr10 20642069 20642450 -119674315 + MLT1A2 LTR MaLR 1 361 -13 301 271 69 7 chr10 20642693 20642837 -119673928 + LTR16C LTR ERVL 330 482 -9 1625 233 7 55 chr10 20643065 20643324 -119673441 + MER57B LTR ERV1 1 230 -204 2208 132 0 0 chr10 20643324 20643635 -119673130 - AluSx SINE Alu -1 311 1 1625 233 7 55 chr10 20643635 20643831 -119672934 + MER57B LTR ERV1 230 434 0 397 335 25 25 chr10 20643835 20644032 -119672733 + MER57B-int LTR ERV1 3 199 -7338 201 292 0 83 chr10 20644118 20644214 -119672551 - MER5A DNA MER1_type -42 147 60 511 174 0 0 chr10 20644996 20645082 -119671683 + AluSc SINE Alu 210 295 -14 302 306 99 0 chr10 20646711 20646822 -119669943 + L2 LINE L2 3138 3259 -13 210 118 0 0 chr10 20648084 20648118 -119668647 + (T)n Simple_repeat Simple_repeat 1 34 0 1031 173 5 0 chr10 20648165 20648350 -119668415 - MER50 LTR ERV1 -23 711 526 2172 143 42 20 chr10 20649096 20649452 -119667313 - THE1B LTR MaLR 0 364 1 185 246 15 0 chr10 20649734 20649799 -119666966 + (CATA)n Simple_repeat Simple_repeat 3 68 0 983 99 35 0 chr10 20650381 20650522 -119666243 + L1PA11 LINE L1 6025 6170 -4 190 107 0 0 chr10 20650721 20650749 -119666016 - MIR SINE MIR -122 140 113 194 288 88 38 chr10 20651282 20651362 -119665403 + L2 LINE L2 3186 3269 -3 312 361 56 35 chr10 20651595 20651739 -119665026 - L2 LINE L2 0 3272 3126 336 288 135 22 chr10 20651821 20652050 -119664715 - MLT1K LTR MaLR -69 519 265 1039 300 58 27 chr10 20652453 20653403 -119663362 + L1MB1 LINE L1 4095 5095 -1062 2206 119 0 13 chr10 20653403 20653706 -119663059 - AluSx SINE Alu -13 299 1 1039 300 58 27 chr10 20653706 20653981 -119662784 + L1MB1 LINE L1 5095 5360 -797 319 280 169 24 chr10 20653990 20654286 -119662479 + L1MB1 LINE L1 5465 5803 -359 3447 183 22 62 chr10 20654732 20655576 -119661189 + L1PA16 LINE L1 5341 6151 -15 2351 113 0 0 chr10 20656120 20656420 -119660345 - AluSx SINE Alu -10 302 3 465 323 108 42 chr10 20656502 20656809 -119659956 + L1MEd LINE L1 59 385 -5734 7868 81 13 5 chr10 20656843 20657996 -119658769 + L1P LINE L1 1192 2353 -3793 1057 116 6 29 chr10 20708078 20708251 -119608514 - MER39 LTR ERV1 0 707 539 1473 198 7 10 chr10 20708310 20708598 -119608167 - MER39 LTR ERV1 -164 543 257 306 197 169 0 chr10 20708572 20708643 -119608122 - MER39 LTR ERV1 -574 133 51 * 1190 228 8 0 chr10 20709735 20709989 -119606776 + L1MB1 LINE L1 5884 6139 -29 1427 149 124 8 chr10 20709989 20710238 -119606527 + AluSg1 SINE Alu 1 278 -31 21 71 0 0 chr10 20710285 20710327 -119606438 + AT_rich Low_complexity Low_complexity 1 42 0 1664 228 8 0 chr10 20711013 20711391 -119605374 + L1 LINE L1 4813 5193 -953 263 324 145 37 chr10 20712497 20712821 -119603944 - L1MC4a LINE L1 -1898 5910 5552 1640 216 65 23 chr10 20713158 20713588 -119603177 - MER39 LTR ERV1 0 707 260 238 297 14 14 chr10 20713595 20713669 -119603096 - MER34C LTR ERV1 -506 79 6 188 182 23 0 chr10 20713798 20713842 -119602923 + CT-rich Low_complexity Low_complexity 2 46 0 235 170 38 0 chr10 20714012 20714065 -119602700 + (TATG)n Simple_repeat Simple_repeat 3 57 0 180 0 0 0 chr10 20714736 20714756 -119602009 + (TA)n Simple_repeat Simple_repeat 2 21 0 34 24 0 0 chr10 20714846 20714887 -119601878 + AT_rich Low_complexity Low_complexity 1 41 0 2366 41 54 0 chr10 20715529 20715824 -119600941 + AluYb8 SINE Alu 1 311 -7 216 0 0 0 chr10 20716195 20716219 -119600546 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr10 20716771 20716792 -119599973 + AT_rich Low_complexity Low_complexity 1 21 0 4770 175 50 29 chr10 20717137 20718286 -119598479 - L1MA6 LINE L1 0 7719 6551 359 36 55 0 chr10 20718325 20718380 -119598385 - L1MA4A LINE L1 -21 6282 6225 640 154 0 26 chr10 20718381 20718498 -119598267 - L1MA4A LINE L1 -275 6028 5915 * 5411 217 45 12 chr10 20718493 20720150 -119596615 - L1MA6 LINE L1 -2557 5008 3297 1969 234 38 55 chr10 20720177 20720646 -119596119 - L1MA6 LINE L1 -4521 3045 2590 2367 84 0 9 chr10 20720646 20720967 -119595798 - AluYb8 SINE Alu 0 318 1 1969 234 38 55 chr10 20720967 20721201 -119595564 - L1MA6 LINE L1 -4976 2590 2354 1115 153 6 0 chr10 20721902 20722072 -119594693 + AluSg/x SINE Alu 132 302 -8 448 222 115 127 chr10 20722078 20722286 -119594479 - MER66A LTR ERV1 -77 401 295 2394 90 3 0 chr10 20722286 20722598 -119594167 + AluSp SINE Alu 1 313 0 448 222 115 127 chr10 20722598 20722795 -119593970 - MER66A LTR ERV1 -183 295 97 1223 178 89 22 chr10 20723321 20723591 -119593174 + MER2 DNA MER2_type 58 345 0 203 348 62 53 chr10 20723595 20723777 -119592988 - MIR SINE MIR -56 206 27 270 229 0 0 chr10 20724166 20724236 -119592529 + CT-rich Low_complexity Low_complexity 1 70 0 293 329 90 18 chr10 20724923 20725090 -119591675 + MIR SINE MIR 51 229 -33 402 205 259 9 chr10 20725713 20725825 -119590940 + MIR SINE MIR 31 170 -92 1230 278 109 54 chr10 20726660 20727449 -119589316 - L1ME LINE L1 -4485 1776 1032 1715 170 109 0 chr10 20727449 20727779 -119588986 - MER47A DNA MER2_type 0 366 1 1230 278 109 54 chr10 20727779 20728117 -119588648 - L1ME LINE L1 -5229 1032 714 1226 414 23 0 chr10 20728117 20728419 -119588346 - AluSx SINE Alu -3 309 1 1230 278 109 54 chr10 20728419 20728778 -119587987 - L1ME LINE L1 -5547 714 154 307 333 45 18 chr10 20729180 20729291 -119587474 - L2 LINE L2 -20 3252 3139 1009 261 46 15 chr10 20729488 20729817 -119586948 - MER58B DNA MER1_type 0 341 3 2031 136 0 10 chr10 20730188 20730483 -119586282 - AluSx SINE Alu -20 292 1 33 56 0 0 chr10 20730513 20730567 -119586198 + AT_rich Low_complexity Low_complexity 1 54 0 1901 141 60 20 chr10 20730676 20731023 -119585742 + MER46B DNA MER2_type 1 236 0 1891 220 43 77 chr10 20732481 20733126 -119583639 + MLT1E2 LTR MaLR 1 618 -8 363 73 44 0 chr10 20733515 20733583 -119583182 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 2689 229 54 25 chr10 20733597 20734435 -119582330 - L1M4 LINE L1 -1006 5638 4777 255 338 21 55 chr10 20735000 20735145 -119581620 + MIR SINE MIR 17 156 -106 241 326 11 0 chr10 20735279 20735368 -119581397 + MIR SINE MIR 172 261 -1 25 31 0 0 chr10 20735375 20735407 -119581358 + AT_rich Low_complexity Low_complexity 1 32 0 493 137 0 49 chr10 20735414 20735516 -119581249 - L1PA11 LINE L1 -2 6172 6076 5049 243 59 15 chr10 20735524 20737028 -119579737 - L1M4 LINE L1 -2192 4452 2831 7198 159 12 1 chr10 20737028 20739060 -119577705 + L1PA11 LINE L1 4130 6174 0 5049 243 59 15 chr10 20739060 20739631 -119577134 - L1M4 LINE L1 -3813 2831 2287 2464 246 127 21 chr10 20739684 20740094 -119576671 - L1M4 LINE L1 -5237 1305 940 1724 184 45 28 chr10 20740094 20740453 -119576312 - MLT1A1 LTR MaLR 0 365 1 2464 246 127 21 chr10 20740453 20740883 -119575882 - L1M4 LINE L1 -5602 940 376 309 350 102 34 chr10 20740983 20741160 -119575605 + L2 LINE L2 2598 2786 -528 266 310 69 100 chr10 20741301 20741453 -119575312 + L2 LINE L2 2985 3125 -147 2153 98 24 0 chr10 20741453 20741740 -119575025 - AluSc SINE Alu -11 298 5 266 310 69 100 chr10 20741740 20741877 -119574888 + L2 LINE L2 3125 3265 -7 21 0 0 0 chr10 20742065 20742086 -119574679 + AT_rich Low_complexity Low_complexity 1 21 0 266 374 122 0 chr10 20742510 20742657 -119574108 - MIR3 SINE MIR -1 207 43 1585 183 44 3 chr10 20743349 20743644 -119573121 - AluJo SINE Alu -5 307 1 362 115 11 35 chr10 20745050 20745137 -119571628 + (TA)n Simple_repeat Simple_repeat 2 86 0 241 176 78 0 chr10 20745139 20745190 -119571575 - L1MC4 LINE L1 -1340 6702 6648 279 293 0 0 chr10 20745190 20745313 -119571452 + (TA)n Simple_repeat Simple_repeat 2 124 0 235 262 71 0 chr10 20745318 20745402 -119571363 - L1MC4 LINE L1 -1339 6703 6614 * 244 241 46 23 chr10 20745331 20745418 -119571347 + L1MC4 LINE L1 6615 6703 -1339 23 33 0 0 chr10 20745418 20745448 -119571317 + AT_rich Low_complexity Low_complexity 1 30 0 310 285 225 7 chr10 20745956 20746107 -119570658 - MIR SINE MIR -6 256 73 196 329 0 76 chr10 20746874 20746953 -119569812 - L3b LINE CR1 -11 1572 1500 477 318 7 0 chr10 20747562 20747710 -119569055 - MER46C DNA MER2_type 0 338 190 204 265 103 0 chr10 20748794 20748862 -119567903 - L2 LINE L2 -13 3300 3226 277 225 28 14 chr10 20748876 20748947 -119567818 - MIR SINE MIR -32 230 159 188 296 197 38 chr10 20749411 20749481 -119567284 - MIR SINE MIR -109 153 95 2066 126 0 0 chr10 20749481 20749782 -119566983 - AluY SINE Alu -10 301 1 188 296 197 38 chr10 20749782 20749843 -119566922 - MIR SINE MIR -167 95 1 * 310 306 93 21 chr10 20749843 20750019 -119566746 - MIR SINE MIR -70 192 3 2422 138 23 9 chr10 20750139 20750574 -119566191 - L1MA4 LINE L1 -7 6293 5853 480 67 0 0 chr10 20751298 20751358 -119565407 - AluS SINE Alu -235 78 19 1299 113 0 21 chr10 20751358 20751594 -119565171 + AluSp SINE Alu 104 335 0 216 0 0 0 chr10 20751593 20751617 -119565148 + (TA)n Simple_repeat Simple_repeat 2 25 0 267 259 0 0 chr10 20752124 20752182 -119564583 - L2 LINE L2 -2 3270 3213 21 36 0 0 chr10 20752412 20752440 -119564325 + AT_rich Low_complexity Low_complexity 1 28 0 4877 106 9 36 chr10 20753190 20753694 -119563071 - L1PA14 LINE L1 0 6161 5684 1803 168 0 22 chr10 20753694 20754010 -119562755 - AluJb SINE Alu -3 309 1 4877 106 9 36 chr10 20754010 20754285 -119562480 - L1PA14 LINE L1 -477 5684 5403 200 167 21 0 chr10 20754539 20754587 -119562178 + GA-rich Low_complexity Low_complexity 2 50 0 616 207 58 46 chr10 20754721 20754788 -119561977 - MER3 DNA MER1_type -33 129 103 2068 108 0 4 chr10 20754788 20755112 -119561653 - AluSc SINE Alu 0 323 1 616 207 58 46 chr10 20755112 20755217 -119561548 - MER3 DNA MER1_type -59 103 1 258 116 0 0 chr10 20755287 20755330 -119561435 + (T)n Simple_repeat Simple_repeat 1 43 0 4765 9 0 0 chr10 20755344 20755883 -119560882 - L1HS LINE L1 -1 6154 5616 * 6651 27 0 0 chr10 20755879 20756682 -119560083 + L1P LINE L1 3134 3936 -2210 33 90 0 0 chr10 20756905 20756994 -119559771 + AT_rich Low_complexity Low_complexity 1 89 0 217 219 0 0 chr10 20757181 20757222 -119559543 + CT-rich Low_complexity Low_complexity 3 43 0 180 125 0 0 chr10 20757605 20757637 -119559128 + (CA)n Simple_repeat Simple_repeat 1 32 0 289 363 94 23 chr10 20758060 20758231 -119558534 + L2 LINE L2 3082 3264 -8 1392 273 18 18 chr10 20758343 20758735 -119558030 - L1M4 LINE L1 -6149 393 2 3190 119 92 0 chr10 20761412 20761943 -119554822 - LTR19B LTR ERV1 0 580 1 1769 106 8 0 chr10 20762303 20762567 -119554198 - L1MA2 LINE L1 0 6304 6039 415 198 104 10 chr10 20763014 20763110 -119553655 + MER81 DNA DNA 10 114 0 186 103 0 0 chr10 20763275 20763304 -119553461 + (T)n Simple_repeat Simple_repeat 1 29 0 22 0 0 0 chr10 20763310 20763332 -119553433 + AT_rich Low_complexity Low_complexity 1 22 0 37012 31 10 1 chr10 20763332 20769365 -119547400 - L1HS LINE L1 0 6155 1 392 297 39 28 chr10 20771802 20771984 -119544781 - MIR SINE MIR 0 262 79 3099 140 53 2 chr10 20772343 20772870 -119543895 + MER41C LTR ERV1 1 554 0 2103 191 35 116 chr10 20773423 20774089 -119542676 - LTR9 LTR ERV1 0 612 1 27 22 0 22 chr10 20774496 20774510 -119542255 + AT_rich Low_complexity Low_complexity 1 14 -30 2017 112 17 14 chr10 20774510 20774797 -119541968 - AluSx SINE Alu -14 298 11 27 22 0 22 chr10 20774797 20774827 -119541938 + AT_rich Low_complexity Low_complexity 14 44 0 554 269 117 20 chr10 20775791 20775988 -119540777 - MIR SINE MIR -10 252 37 193 133 67 0 chr10 20775992 20776067 -119540698 + (TA)n Simple_repeat Simple_repeat 2 81 0 29 28 0 0 chr10 20776086 20776122 -119540643 + AT_rich Low_complexity Low_complexity 1 36 0 235 129 45 52 chr10 20776153 20776308 -119540457 + (TATAA)n Simple_repeat Simple_repeat 5 158 0 422 133 66 12 chr10 20776351 20776517 -119540248 + (TA)n Simple_repeat Simple_repeat 1 175 0 24 0 0 0 chr10 20776551 20776575 -119540190 + AT_rich Low_complexity Low_complexity 1 24 0 342 208 60 6 chr10 20776594 20776793 -119539972 + (TA)n Simple_repeat Simple_repeat 1 209 0 272 135 27 36 chr10 20776796 20776907 -119539858 + (TATAA)n Simple_repeat Simple_repeat 1 110 0 2024 128 3 3 chr10 20777597 20777895 -119538870 - AluSx SINE Alu -14 298 1 3707 220 28 39 chr10 20778074 20779044 -119537721 + L1MA9 LINE L1 5316 6274 -38 27 0 0 0 chr10 20779212 20779239 -119537526 + AT_rich Low_complexity Low_complexity 1 27 0 211 200 120 0 chr10 20779369 20779444 -119537321 - MIR SINE MIR -44 218 135 2338 56 20 20 chr10 20779516 20779820 -119536945 - AluY SINE Alu -7 304 1 1972 138 3 0 chr10 20781728 20782038 -119534727 - AluSx SINE Alu 0 311 1 194 0 39 0 chr10 20782694 20782720 -119534045 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 270 0 0 0 chr10 20783005 20783035 -119533730 + (TG)n Simple_repeat Simple_repeat 2 31 0 180 311 0 16 chr10 20784302 20784363 -119532402 - MIR SINE MIR -18 244 185 650 320 43 46 chr10 20784439 20784786 -119531979 - L2 LINE L2 -141 3172 2827 297 257 301 0 chr10 20784802 20784843 -119531922 + MER5B DNA MER1_type 1 28 -150 1751 142 50 3 chr10 20784843 20785160 -119531605 + L1PA16 LINE L1 5832 6163 -3 297 257 301 0 chr10 20785160 20785254 -119531511 + MER5B DNA MER1_type 28 177 -1 * 407 290 145 0 chr10 20785254 20785389 -119531376 - L2 LINE L2 -502 2812 2657 1683 250 57 38 chr10 20785413 20785961 -119530804 - MER90 LTR ERV1 -35 579 22 461 252 8 30 chr10 20785964 20786095 -119530670 - L2 LINE L2 -665 2649 2522 6820 218 28 54 chr10 20786116 20788906 -119527859 + L1MB3 LINE L1 3144 5870 -313 2151 108 3 14 chr10 20788906 20789194 -119527571 + AluSx SINE Alu 1 285 -27 6820 218 28 54 chr10 20789194 20789209 -119527556 + L1MB3 LINE L1 5870 5884 -299 21 0 0 0 chr10 20789212 20789233 -119527532 + AT_rich Low_complexity Low_complexity 1 21 0 1408 193 12 15 chr10 20789233 20789564 -119527201 + L1MB3 LINE L1 5854 6183 0 1414 242 29 27 chr10 20789585 20789961 -119526804 + MLT1E2 LTR MaLR 248 624 -2 452 283 79 14 chr10 20790012 20790302 -119526463 - L1MEc LINE L1 -4805 1591 1283 2109 133 7 0 chr10 20790463 20790765 -119526000 + AluJb SINE Alu 1 304 -8 195 129 0 0 chr10 20791031 20791062 -119525703 + (TA)n Simple_repeat Simple_repeat 1 31 0 643 283 242 11 chr10 20791706 20792070 -119524695 + L2 LINE L2 1501 1948 -1366 1165 167 133 21 chr10 20792078 20792318 -119524447 + Tigger7 DNA MER2_type 1 267 -466 368 281 0 11 chr10 20792323 20792412 -119524353 + Tigger7 DNA MER2_type 2499 2586 -1 1253 257 126 16 chr10 20792415 20792867 -119523898 + L2 LINE L2 1961 2462 -852 2425 294 195 45 chr10 20792868 20794121 -119522644 + L2 LINE L2 1125 2188 -1125 1832 159 55 25 chr10 20794121 20794485 -119522280 - THE1C LTR MaLR 0 375 1 2425 294 195 45 chr10 20794485 20795126 -119521639 + L2 LINE L2 2188 3300 -13 185 0 40 0 chr10 20795127 20795152 -119521613 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 554 64 51 0 chr10 20795219 20795297 -119521468 - AluSg/x SINE Alu -11 298 217 1885 268 19 29 chr10 20795328 20795851 -119520914 - LTR40a LTR ERVL -1 518 1 24 0 0 0 chr10 20796052 20796076 -119520689 + AT_rich Low_complexity Low_complexity 1 24 0 196 315 75 95 chr10 20796577 20796708 -119520057 + MIR SINE MIR 9 141 -121 2078 136 0 0 chr10 20796708 20797033 -119519732 + AluSx SINE Alu 1 325 0 1410 182 37 14 chr10 20797040 20797337 -119519428 + AluJb SINE Alu 1 304 -8 196 315 75 95 chr10 20797337 20797395 -119519370 + MIR SINE MIR 147 204 -58 225 0 0 0 chr10 20797836 20797861 -119518904 + (T)n Simple_repeat Simple_repeat 1 25 0 238 224 0 0 chr10 20798339 20798388 -119518377 + (TA)n Simple_repeat Simple_repeat 1 49 0 2213 101 0 3 chr10 20799015 20799303 -119517462 - AluSc SINE Alu -22 287 1 449 314 83 18 chr10 20800027 20800260 -119516505 + MIR SINE MIR 17 262 0 227 213 21 0 chr10 20800279 20800326 -119516439 + CT-rich Low_complexity Low_complexity 1 48 0 348 285 64 64 chr10 20802616 20802788 -119513977 - L2 LINE L2 -26 3287 3116 76 51 0 0 chr10 20803217 20803335 -119513430 + AT_rich Low_complexity Low_complexity 1 118 0 1734 167 25 48 chr10 20804565 20804684 -119512081 - MER44D DNA MER2_type -1884 603 483 2077 120 3 7 chr10 20804684 20804992 -119511773 - AluSx SINE Alu -5 307 1 1734 167 25 48 chr10 20804992 20805355 -119511410 - MER44D DNA MER2_type -2004 483 1 280 344 23 23 chr10 20805798 20805926 -119510839 + MER5A DNA MER1_type 34 161 -28 575 242 34 62 chr10 20805938 20806116 -119510649 + MER5B DNA MER1_type 6 178 0 22 0 0 0 chr10 20807239 20807261 -119509504 + AT_rich Low_complexity Low_complexity 1 22 0 219 329 71 41 chr10 20807421 20807627 -119509138 - MIR SINE MIR -30 232 27 1855 110 41 7 chr10 20808613 20808905 -119507860 + AluSx SINE Alu 11 312 0 2246 229 59 55 chr10 20809349 20810373 -119506392 - L1ME1 LINE L1 -92 6143 5125 1344 126 0 0 chr10 20810538 20810721 -119506044 - AluSg SINE Alu -127 183 1 2404 258 71 26 chr10 20810753 20811638 -119505127 - L1ME1 LINE L1 -5436 960 36 7329 139 7 2 chr10 20811772 20812935 -119503830 - HSMAR2 DNA Mariner -4 1298 70 219 124 105 19 chr10 20812937 20813042 -119503723 + (TATAA)n Simple_repeat Simple_repeat 2 115 0 453 146 52 21 chr10 20813045 20813141 -119503624 - HSMAR2 DNA Mariner -1202 100 2 256 315 23 23 chr10 20813275 20813297 -119503468 + CT-rich Low_complexity Low_complexity 2 23 -108 2170 134 3 0 chr10 20813297 20813604 -119503161 - AluSg SINE Alu -2 308 1 256 315 23 23 chr10 20813604 20813711 -119503054 + CT-rich Low_complexity Low_complexity 22 131 0 1933 253 28 74 chr10 20813896 20814206 -119502559 - L1M2 LINE L1 -4686 2482 2159 2889 9 0 9 chr10 20814206 20814527 -119502238 - AluYb8 SINE Alu 0 318 1 1933 253 28 74 chr10 20814527 20815061 -119501704 - L1M2 LINE L1 -5009 2159 1696 1741 340 8 10 chr10 20815438 20816036 -119500729 - L1M2 LINE L1 -6569 599 3 330 385 117 15 chr10 20817150 20817612 -119499153 - L2 LINE L2 -2513 801 293 22 0 0 0 chr10 20817960 20817982 -119498783 + AT_rich Low_complexity Low_complexity 1 22 0 195 186 0 0 chr10 20819245 20819288 -119497477 + CT-rich Low_complexity Low_complexity 3 45 0 236 344 11 11 chr10 20819295 20819388 -119497377 + C-rich Low_complexity Low_complexity 2 94 0 233 253 0 12 chr10 20819388 20819471 -119497294 + CT-rich Low_complexity Low_complexity 2 83 0 465 34 0 0 chr10 20819603 20819662 -119497103 + (CA)n Simple_repeat Simple_repeat 2 60 0 1610 134 71 0 chr10 20820202 20820441 -119496324 + AluSx SINE Alu 38 293 -19 1011 235 4 28 chr10 20820470 20820520 -119496245 + MER74A LTR ERVL 194 244 -314 1776 207 24 3 chr10 20820520 20820902 -119495863 - MLT1B LTR MaLR 0 390 1 1011 235 4 28 chr10 20820902 20821098 -119495667 + MER74A LTR ERVL 244 434 -124 594 112 10 10 chr10 20821140 20821238 -119495527 + L1PA13 LINE L1 6053 6150 -13 1784 119 0 0 chr10 20821465 20821709 -119495056 + AluSg SINE Alu 60 303 -7 2351 95 0 19 chr10 20822617 20822932 -119493833 + AluSx SINE Alu 1 309 -3 606 295 48 51 chr10 20823679 20824015 -119492750 - L2 LINE L2 0 3313 2979 2879 141 50 28 chr10 20824021 20824612 -119492153 - MER4B LTR ERV1 0 779 9 2386 240 99 180 chr10 20824676 20825088 -119491677 - L2 LINE L2 -518 2796 2352 5181 84 13 0 chr10 20825088 20825769 -119490996 - LTR8 LTR ERV1 -1 690 1 2386 240 99 180 chr10 20825769 20826265 -119490500 - L2 LINE L2 -962 2352 1818 1489 153 57 82 chr10 20826265 20826554 -119490211 + L1MB5 LINE L1 5817 6112 -62 2174 120 3 0 chr10 20826554 20826854 -119489911 - AluSq SINE Alu -12 301 1 2202 101 14 0 chr10 20826854 20827150 -119489615 - AluSx SINE Alu -12 300 1 1489 153 57 82 chr10 20827150 20827226 -119489539 + L1MB5 LINE L1 6110 6174 0 2386 240 99 180 chr10 20827226 20828544 -119488221 - L2 LINE L2 -1496 1818 418 2095 106 0 33 chr10 20828544 20828846 -119487919 - AluSx SINE Alu -20 292 1 2386 240 99 180 chr10 20828846 20828906 -119487859 - L2 LINE L2 -2896 418 355 222 37 0 0 chr10 20829109 20829136 -119487629 + (TG)n Simple_repeat Simple_repeat 1 27 0 1663 177 3 43 chr10 20829736 20830035 -119486730 + AluJo SINE Alu 3 289 -23 2262 129 0 0 chr10 20830746 20831056 -119485709 - AluSx SINE Alu -2 310 1 1101 128 0 0 chr10 20831080 20831260 -119485505 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 219 263 0 0 chr10 20831308 20831365 -119485400 + T-rich Low_complexity Low_complexity 1 57 0 30 0 0 0 chr10 20832508 20832538 -119484227 + AT_rich Low_complexity Low_complexity 1 30 0 3239 75 20 2 chr10 20832573 20833015 -119483750 - L1PA10 LINE L1 -11 6157 5708 989 236 62 22 chr10 20833063 20833338 -119483427 - L1MCb LINE L1 -5047 998 713 2661 231 147 14 chr10 20834794 20835534 -119481231 - MER21B LTR ERV1 -19 844 6 259 220 29 18 chr10 20835538 20835827 -119480938 + (TA)n Simple_repeat Simple_repeat 1 292 0 291 162 30 0 chr10 20836471 20836570 -119480195 + (TATG)n Simple_repeat Simple_repeat 3 104 0 24 0 0 0 chr10 20837609 20837633 -119479132 + AT_rich Low_complexity Low_complexity 1 24 0 1418 118 0 14 chr10 20838740 20838951 -119477814 - AluSg/x SINE Alu -6 306 99 440 66 0 165 chr10 20840240 20840331 -119476434 + MADE1 DNA Mariner 1 76 -4 21 0 0 0 chr10 20840864 20840885 -119475880 + AT_rich Low_complexity Low_complexity 1 21 0 1911 154 7 3 chr10 20840971 20841264 -119475501 - AluSx SINE Alu -18 294 1 931 185 46 0 chr10 20841372 20841567 -119475198 + MER3 DNA MER1_type 2 205 -4 402 50 33 0 chr10 20842151 20842211 -119474554 - L1PA6 LINE L1 0 6154 6093 2200 109 0 13 chr10 20843061 20843373 -119473392 + AluSg SINE Alu 1 308 -2 2204 122 3 0 chr10 20844160 20844455 -119472310 - AluSx SINE Alu -14 298 3 479 238 182 0 chr10 20845481 20845624 -119471141 + MER5A DNA MER1_type 21 189 0 23 0 0 0 chr10 20845771 20845794 -119470971 + AT_rich Low_complexity Low_complexity 1 23 0 2938 169 44 11 chr10 20846171 20846264 -119470501 + L1MA9 LINE L1 5676 5765 -547 393 22 0 0 chr10 20846264 20846310 -119470455 + (TG)n Simple_repeat Simple_repeat 2 47 0 2938 169 44 11 chr10 20846310 20846833 -119469932 + L1MA9 LINE L1 5765 6312 0 1888 147 32 0 chr10 20846958 20847299 -119469466 + L1MB3 LINE L1 5828 6179 -4 2626 52 0 0 chr10 20847628 20847935 -119468830 + AluY SINE Alu 1 307 -4 323 292 25 42 chr10 20849241 20849361 -119467404 + MER94 DNA DNA 17 134 0 427 214 141 32 chr10 20849943 20850101 -119466664 + MER8 DNA MER2_type 50 345 0 358 326 144 5 chr10 20850434 20850621 -119466144 + MIR SINE MIR 22 234 -28 1959 146 0 32 chr10 20851099 20851415 -119465350 + AluSx SINE Alu 1 306 -6 215 345 35 0 chr10 20852446 20852533 -119464232 - L3b LINE CR1 -275 1308 1219 740 165 16 8 chr10 20852767 20852894 -119463871 - FLAM_C SINE Alu -14 129 2 367 295 93 0 chr10 20854083 20854212 -119462553 + MIR SINE MIR 115 255 -7 198 0 0 0 chr10 20854526 20854548 -119462217 + (TA)n Simple_repeat Simple_repeat 2 23 0 525 58 0 0 chr10 20854799 20854868 -119461897 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 1262 140 0 39 chr10 20854870 20855077 -119461688 - AluSg/x SINE Alu -29 283 85 1732 239 27 23 chr10 20855415 20855933 -119460832 - L1ME1 LINE L1 -2 6164 5645 216 0 0 0 chr10 20855954 20855978 -119460787 + (TTTTTG)n Simple_repeat Simple_repeat 3 26 0 1011 294 21 50 chr10 20855978 20856397 -119460368 - L1MEc LINE L1 -5834 562 156 350 356 97 36 chr10 20856522 20856912 -119459853 - L1MC/D LINE L1 -1985 5823 5410 849 274 109 33 chr10 20856939 20857606 -119459159 - L1MC/D LINE L1 -1634 4512 3795 638 332 68 57 chr10 20858044 20859171 -119457594 - L1M4 LINE L1 -1461 4685 3540 1472 186 100 4 chr10 20859171 20859451 -119457314 + AluJo SINE Alu 1 307 -5 638 332 68 57 chr10 20859451 20859587 -119457178 - L1M4 LINE L1 -2606 3540 3407 269 291 146 0 chr10 20861363 20861473 -119455292 + MIR SINE MIR 8 133 -129 184 283 87 0 chr10 20861572 20861618 -119455147 + L2 LINE L2 3210 3259 -13 189 147 0 0 chr10 20862022 20862056 -119454709 + (TTTTC)n Simple_repeat Simple_repeat 1 34 0 2001 88 92 3 chr10 20862998 20863282 -119453483 - AluY SINE Alu 0 311 3 27 29 0 0 chr10 20964267 20964301 -119352464 + AT_rich Low_complexity Low_complexity 1 34 0 269 319 74 15 chr10 20964358 20964493 -119352272 - MIR SINE MIR -29 233 91 233 210 73 145 chr10 20964615 20964739 -119352026 - MER117 DNA MER1_type -1 196 82 2053 115 45 3 chr10 20964750 20965038 -119351727 + AluSx SINE Alu 1 300 -12 294 329 58 7 chr10 20965775 20965912 -119350853 + MIR SINE MIR 12 155 -107 25 0 0 0 chr10 20965985 20966010 -119350755 + AT_rich Low_complexity Low_complexity 1 25 0 275 270 56 0 chr10 20966774 20966863 -119349902 - MIR SINE MIR -16 246 153 761 309 49 10 chr10 20967082 20967389 -119349376 + MER46C DNA MER2_type 20 338 0 312 272 25 12 chr10 20967389 20967470 -119349295 - MIR SINE MIR -105 157 76 1885 142 22 0 chr10 20967517 20967816 -119348949 + AluSx SINE Alu 1 305 0 2262 93 10 16 chr10 20968341 20968651 -119348114 - AluY SINE Alu -3 308 1 1184 102 0 0 chr10 20969237 20969403 -119347362 - L1PA10 LINE L1 -4 6164 5999 428 331 141 0 chr10 20970741 20971004 -119345761 - L2 LINE L2 0 3313 3014 349 320 155 36 chr10 20971270 20971689 -119345076 - L2 LINE L2 -18 3295 2827 255 61 0 0 chr10 20972108 20972141 -119344624 + (CA)n Simple_repeat Simple_repeat 2 34 0 30 45 0 0 chr10 20972676 20972720 -119344045 + AT_rich Low_complexity Low_complexity 1 44 0 23 68 0 0 chr10 20972784 20972828 -119343937 + AT_rich Low_complexity Low_complexity 1 44 0 25 31 0 0 chr10 20972869 20972901 -119343864 + AT_rich Low_complexity Low_complexity 1 32 0 42 36 0 0 chr10 20973335 20973391 -119343374 + AT_rich Low_complexity Low_complexity 1 56 0 5990 187 100 70 chr10 20973451 20974009 -119342756 - L1MC3 LINE L1 -18 7767 7228 284 267 0 0 chr10 20974009 20974084 -119342681 - MLT1F1 LTR MaLR -458 109 35 5990 187 100 70 chr10 20974084 20975245 -119341520 - L1MC3 LINE L1 -557 7228 5919 248 234 39 0 chr10 20975465 20975542 -119341223 + T-rich Low_complexity Low_complexity 3 82 0 23 0 0 0 chr10 20975736 20975759 -119341006 + AT_rich Low_complexity Low_complexity 1 23 0 2498 179 37 76 chr10 20976291 20976961 -119339804 - L1MB3 LINE L1 -115 6068 5425 47 33 0 0 chr10 20977336 20977397 -119339368 + AT_rich Low_complexity Low_complexity 1 61 0 1444 189 7 30 chr10 20977482 20977779 -119338986 + AluJo SINE Alu 1 290 -22 38701 73 16 2 chr10 20978579 20984575 -119332190 - L1PA5 LINE L1 -2 6152 79 1127 156 7 0 chr10 20985321 20990541 -119326224 + ALR/Alpha Satellite centromeric 1 5252 -31 34 108 0 0 chr10 20990982 20991121 -119325644 + AT_rich Low_complexity Low_complexity 1 139 0 1823 107 0 0 chr10 20991445 20991688 -119325077 - AluSc SINE Alu -10 299 57 2351 151 32 53 chr10 20991836 20991978 -119324787 - MER65C LTR ERV1 0 461 317 815 147 7 0 chr10 20991978 20992114 -119324651 + L1PA15 LINE L1 6016 6152 -13 2351 151 32 53 chr10 20992114 20992442 -119324323 - MER65C LTR ERV1 -144 317 1 1966 155 5 47 chr10 20992933 20993313 -119323452 - MLT1A1 LTR MaLR 0 365 2 721 264 83 25 chr10 20995097 20995339 -119321426 + MIR SINE MIR 7 262 0 1046 214 39 18 chr10 20995525 20995806 -119320959 + L1MB8 LINE L1 5890 6176 -2 1199 144 0 83 chr10 20995816 20995864 -119320901 + AluJo SINE Alu 83 133 -179 1965 139 3 3 chr10 20995864 20996159 -119320606 + AluSx SINE Alu 1 295 -17 1199 144 0 83 chr10 20996159 20996339 -119320426 + AluJo SINE Alu 133 292 -20 376 84 14 14 chr10 20996675 20996746 -119320019 + (TA)n Simple_repeat Simple_repeat 2 72 0 310 186 17 0 chr10 20996755 20996814 -119319951 - Tigger5 DNA MER2_type 0 2323 2264 242 191 0 0 chr10 20996834 20996876 -119319889 - Tigger5 DNA MER2_type -2268 55 14 350 219 14 14 chr10 20996877 20996950 -119319815 - Tigger5 DNA MER2_type 0 2323 2251 290 273 0 0 chr10 20996919 20996974 -119319791 - Tigger5 DNA MER2_type -2268 55 1 * 354 45 0 0 chr10 20996976 20997020 -119319745 + (CA)n Simple_repeat Simple_repeat 1 44 0 632 320 17 22 chr10 20997677 20997908 -119318857 + MIR SINE MIR 17 246 -16 1158 107 0 0 chr10 20999020 20999209 -119317556 - AluSc SINE Alu 0 320 132 2345 191 63 2 chr10 20999557 21000002 -119316763 - MER70A LTR ERVL 0 472 1 21 36 0 0 chr10 21000134 21000162 -119316603 + AT_rich Low_complexity Low_complexity 1 28 0 242 311 27 0 chr10 21000921 21000995 -119315770 + MLT1I LTR MaLR 115 190 -219 204 125 0 0 chr10 21001162 21001194 -119315571 + (TA)n Simple_repeat Simple_repeat 1 32 0 47 53 0 0 chr10 21002022 21002097 -119314668 + AT_rich Low_complexity Low_complexity 1 75 0 1529 163 31 16 chr10 21003840 21004098 -119312667 + AluJb SINE Alu 6 267 -45 1872 237 59 7 chr10 21004433 21004872 -119311893 + MER74A LTR ERVL 97 558 0 29 0 0 0 chr10 21005414 21005443 -119311322 + AT_rich Low_complexity Low_complexity 1 29 0 6236 157 20 19 chr10 21005443 21005823 -119310942 - L1PB1 LINE L1 -1 6150 5772 342 0 0 0 chr10 21005823 21005861 -119310904 + (TG)n Simple_repeat Simple_repeat 2 39 0 6236 157 20 19 chr10 21005861 21007633 -119309132 - L1PB1 LINE L1 -379 5772 3999 1511 201 17 10 chr10 21007810 21008098 -119308667 - AluJb SINE Alu -22 290 1 372 279 85 78 chr10 21008217 21008711 -119308054 - L1M4 LINE L1 -653 5521 5015 1320 200 3 40 chr10 21008720 21008924 -119307841 - MLT1B LTR MaLR -4 386 195 1608 159 125 6 chr10 21008924 21009244 -119307521 - MER46B DNA MER2_type -3 233 1 1320 200 3 40 chr10 21009244 21009339 -119307426 - MLT1B LTR MaLR -195 195 98 2260 79 0 4 chr10 21009342 21009622 -119307143 + AluY SINE Alu 1 279 -32 459 45 0 0 chr10 21009622 21009688 -119307077 + AluY SINE Alu 241 306 -4 545 232 7 53 chr10 21009725 21009876 -119306889 - MLT1B LTR MaLR -246 144 1 28 0 0 0 chr10 21010043 21010071 -119306694 + AT_rich Low_complexity Low_complexity 1 28 0 2137 130 0 0 chr10 21010071 21010363 -119306402 - AluSx SINE Alu -20 292 1 29 0 0 0 chr10 21011204 21011233 -119305532 + AT_rich Low_complexity Low_complexity 1 29 0 525 259 35 24 chr10 21011258 21011428 -119305337 + MER5B DNA MER1_type 3 174 -4 471 243 78 66 chr10 21011792 21012035 -119304730 - Charlie2 DNA MER1_type -634 2228 1983 9212 192 43 19 chr10 21012045 21015188 -119301577 - L1MA10 LINE L1 -2 6332 3114 189 220 0 51 chr10 21015383 21015442 -119301323 + MIR SINE MIR 175 230 -32 188 289 0 0 chr10 21015409 21015461 -119301304 + L2 LINE L2 3202 3253 -19 * 4677 164 23 20 chr10 21015491 21016374 -119300391 - L1MB3 LINE L1 -7 6176 5292 22 88 0 0 chr10 21016803 21016860 -119299905 + AT_rich Low_complexity Low_complexity 1 57 0 368 330 64 12 chr10 21017092 21017265 -119299500 - MIR SINE MIR -15 247 66 2458 56 0 0 chr10 21017314 21017601 -119299164 + AluY SINE Alu 1 287 -24 557 366 98 0 chr10 21018558 21018804 -119297961 + MER115 DNA AcHobo 57 326 -367 281 26 0 26 chr10 21019638 21019677 -119297088 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 2425 199 20 66 chr10 21019696 21020299 -119296466 - LTR9 LTR ERV1 0 612 38 313 289 56 38 chr10 21021611 21021809 -119294956 + MIR SINE MIR 15 255 -7 576 244 154 56 chr10 21021849 21022173 -119294592 - MLT1J2 LTR MaLR -23 427 72 194 271 140 56 chr10 21022460 21022567 -119294198 - L2 LINE L2 -1030 2284 2169 197 189 151 19 chr10 21023388 21023441 -119293324 + MER5A DNA MER1_type 120 179 -10 5039 184 117 9 chr10 21024591 21024833 -119291932 + L1PA16 LINE L1 4124 4339 -1827 402 21 0 0 chr10 21024833 21024880 -119291885 + (CA)n Simple_repeat Simple_repeat 2 48 0 5039 184 117 9 chr10 21024880 21026465 -119290300 + L1PA16 LINE L1 4339 6157 -9 3981 146 3 13 chr10 21026848 21027521 -119289244 + L1PB3 LINE L1 5488 6153 -1 2411 54 0 7 chr10 21027542 21027840 -119288925 + AluY SINE Alu 1 296 -15 356 269 91 88 chr10 21027856 21028164 -119288601 + L1ME4a LINE L1 5546 5854 -267 26 30 0 0 chr10 21029689 21029722 -119287043 + AT_rich Low_complexity Low_complexity 1 33 0 202 275 165 0 chr10 21033492 21033583 -119283182 - L2 LINE L2 -778 2536 2431 21 71 0 0 chr10 21034344 21034386 -119282379 + AT_rich Low_complexity Low_complexity 1 42 0 536 307 119 59 chr10 21034500 21034989 -119281776 - MLT1H1 LTR MaLR 0 555 38 30 27 0 0 chr10 21035132 21035169 -119281596 + AT_rich Low_complexity Low_complexity 1 37 0 1478 188 9 32 chr10 21035171 21035512 -119281253 - L1MB3 LINE L1 -10 6173 5841 2135 95 7 20 chr10 21035708 21036013 -119280752 + AluSg SINE Alu 1 301 -9 6593 213 31 18 chr10 21036165 21037159 -119279606 + L1PA12 LINE L1 2117 3097 -4487 1998 158 0 0 chr10 21037159 21037457 -119279308 - AluSx SINE Alu -14 298 1 6593 213 31 18 chr10 21037457 21038809 -119277956 + L1PA12 LINE L1 3097 4497 -3087 1345 206 39 52 chr10 21041527 21041857 -119274908 + MLT2D LTR ERVL 89 414 0 23 0 0 0 chr10 21041971 21041994 -119274771 + AT_rich Low_complexity Low_complexity 1 23 0 1572 205 43 0 chr10 21042058 21042385 -119274380 - L1 LINE L1 -2261 3885 3545 367 286 53 21 chr10 21042492 21042740 -119274025 + L1 LINE L1 4806 5059 -1087 688 252 60 90 chr10 21043000 21043365 -119273400 - L2 LINE L2 -1 3312 2959 590 243 47 24 chr10 21043387 21043556 -119273209 - MER20 DNA MER1_type -1 218 46 1632 132 20 0 chr10 21043930 21044180 -119272585 + AluJb SINE Alu 1 255 -57 327 49 0 0 chr10 21044193 21044234 -119272531 + (GAAAA)n Simple_repeat Simple_repeat 3 43 0 28 99 0 0 chr10 21044365 21044456 -119272309 + AT_rich Low_complexity Low_complexity 1 91 0 24 91 0 0 chr10 21044645 21044711 -119272054 + AT_rich Low_complexity Low_complexity 1 66 0 214 296 0 0 chr10 21046023 21046077 -119270688 - L2 LINE L2 -5 3267 3214 239 265 140 29 chr10 21046334 21046470 -119270295 - MIR SINE MIR -92 170 20 216 224 0 0 chr10 21046749 21046816 -119269949 + (CA)n Simple_repeat Simple_repeat 2 68 0 2878 6 0 0 chr10 21046845 21047162 -119269603 - AluYb8 SINE Alu -1 317 1 237 266 0 0 chr10 21047224 21047318 -119269447 + GA-rich Low_complexity Low_complexity 3 96 0 1702 171 60 37 chr10 21047429 21047810 -119268955 + MLT1B LTR MaLR 1 390 0 864 226 6 6 chr10 21048086 21048263 -119268502 - MER5B DNA MER1_type -1 177 1 319 318 70 16 chr10 21048410 21048539 -119268226 + HAL1 LINE L1 818 953 -1554 259 259 12 0 chr10 21048764 21048845 -119267920 + (TA)n Simple_repeat Simple_repeat 2 83 0 575 246 47 47 chr10 21048907 21049037 -119267728 + L1MC5 LINE L1 7701 7833 -128 2011 180 56 15 chr10 21049037 21049448 -119267317 - MSTA LTR MaLR 0 428 1 575 246 47 47 chr10 21049448 21049549 -119267216 + L1MC5 LINE L1 7832 7932 -29 467 243 62 66 chr10 21050068 21050327 -119266438 - L2 LINE L2 0 3313 3056 190 354 10 21 chr10 21050483 21050579 -119266186 - MIR SINE MIR -8 254 160 1340 197 62 0 chr10 21050687 21050992 -119265773 + MER33 DNA MER1_type 1 324 0 501 304 108 27 chr10 21051315 21051687 -119265078 - MER93a LTR ERV1 0 402 1 1669 315 43 38 chr10 21051688 21051987 -119264778 - MER93a-int LTR ERV1 -395 7142 6846 6185 113 29 18 chr10 21051987 21052945 -119263820 - LTR5 LTR ERVK 0 969 1 1669 315 43 38 chr10 21052945 21053559 -119263206 - MER93a-int LTR ERV1 -691 6846 6225 1078 233 32 109 chr10 21054023 21054427 -119262338 - MER93a-int LTR ERV1 -1341 6196 5824 3351 229 50 77 chr10 21054754 21055267 -119261498 - MER93a-int LTR ERV1 -1497 3439 2913 1933 175 62 52 chr10 21055267 21055638 -119261127 + MSTB LTR MaLR 1 378 -48 2376 76 0 0 chr10 21055638 21055939 -119260826 + AluY SINE Alu 1 301 -10 1933 175 62 52 chr10 21055939 21055989 -119260776 + MSTB LTR MaLR 378 426 0 3351 229 50 77 chr10 21055989 21057561 -119259204 - MER93a-int LTR ERV1 -2023 2913 1916 276 186 0 0 chr10 21057624 21057667 -119259098 - MER34 LTR ERV1 0 542 500 398 179 49 81 chr10 21057675 21057726 -119259039 - MER34 LTR ERV1 -288 254 203 2290 84 0 34 chr10 21057726 21058048 -119258717 - AluY SINE Alu 0 311 1 398 179 49 81 chr10 21058048 21058119 -119258646 - MER34 LTR ERV1 -339 203 136 294 273 40 0 chr10 21058121 21058220 -119258545 - MER93a-int LTR ERV1 -2477 2394 2292 1136 226 65 42 chr10 21058242 21058675 -119258090 - MER93a-int LTR ERV1 -3470 1466 1024 519 196 5 38 chr10 21058795 21058979 -119257786 + CT-rich Low_complexity Low_complexity 3 180 0 401 291 0 28 chr10 21059056 21059197 -119257568 - MER34C LTR ERV1 -155 430 294 594 266 107 52 chr10 21059850 21060083 -119256682 - MER93a-int LTR ERV1 -7289 248 3 577 287 71 45 chr10 21060090 21060470 -119256295 - MER93a LTR ERV1 -12 390 1 1275 203 40 47 chr10 21061662 21061963 -119254802 + AluJb SINE Alu 3 301 -11 367 329 129 6 chr10 21062250 21062420 -119254345 - MIR SINE MIR -71 191 1 21 0 0 0 chr10 21063632 21063653 -119253112 + AT_rich Low_complexity Low_complexity 1 21 0 1133 201 7 26 chr10 21064471 21064744 -119252021 - L1MCb LINE L1 -5077 968 701 584 283 12 12 chr10 21064848 21065021 -119251744 - MIR SINE MIR -78 184 12 766 231 61 38 chr10 21065235 21065447 -119251318 - MIR SINE MIR -44 218 2 2066 99 35 3 chr10 21066375 21066659 -119250106 + AluSx SINE Alu 1 293 -19 2044 118 0 43 chr10 21067051 21067395 -119249370 - AluSp SINE Alu 0 313 1 22 35 0 0 chr10 21068537 21068566 -119248199 + AT_rich Low_complexity Low_complexity 1 29 0 1058 225 46 26 chr10 21069011 21069318 -119247447 + MER119 DNA MER1_type 157 469 -114 2240 105 0 0 chr10 21070493 21070798 -119245967 + AluSc SINE Alu 1 305 -4 2233 217 71 12 chr10 21070877 21071439 -119245326 + L1MCa LINE L1 1 595 -5831 254 260 41 0 chr10 21071443 21071516 -119245249 + L1MCa LINE L1 2088 2163 -4263 * 701 242 73 45 chr10 21071515 21072101 -119244664 + L1MCa LINE L1 2116 2719 -3707 680 193 80 0 chr10 21072087 21072274 -119244491 + L1M4 LINE L1 4487 4688 -1458 * 756 194 32 11 chr10 21072275 21072461 -119244304 + L1MC2 LINE L1 6149 6338 -6 410 94 60 0 chr10 21072502 21072619 -119244146 + (TA)n Simple_repeat Simple_repeat 1 124 0 395 281 76 12 chr10 21073284 21073455 -119243310 - MIR SINE MIR 0 262 81 2000 123 0 4 chr10 21073508 21073785 -119242980 - AluSg SINE Alu -30 280 5 21 0 0 0 chr10 21074074 21074095 -119242670 + AT_rich Low_complexity Low_complexity 1 21 0 2094 165 89 2 chr10 21074681 21075075 -119241690 - MSTA LTR MaLR 0 428 1 486 254 57 62 chr10 21075119 21075328 -119241437 + MLT1K LTR MaLR 223 430 -158 566 320 102 44 chr10 21075904 21076103 -119240662 + L1ME4a LINE L1 5478 5664 -457 2163 95 3 0 chr10 21076103 21076419 -119240346 - AluSg SINE Alu 0 317 1 566 320 102 44 chr10 21076419 21076630 -119240135 + L1ME4a LINE L1 5664 5913 -208 272 221 70 0 chr10 21076694 21076780 -119239985 - L1MC4 LINE L1 -1337 6705 6614 340 291 45 34 chr10 21076801 21076980 -119239785 + L1ME4a LINE L1 5935 6115 -6 691 307 87 63 chr10 21077316 21077586 -119239179 + LTR33A LTR ERVL 23 310 -213 465 46 0 0 chr10 21077586 21077651 -119239114 - L1PA6 LINE L1 0 6154 6090 691 307 87 63 chr10 21077651 21077826 -119238939 + LTR33A LTR ERVL 310 479 -44 181 0 69 0 chr10 21077963 21077992 -119238773 + (CATTA)n Simple_repeat Simple_repeat 5 35 0 331 357 91 32 chr10 21078132 21078523 -119238242 - L2 LINE L2 -230 3083 2640 838 187 171 0 chr10 21078545 21078732 -119238033 - MLT1A1 LTR MaLR 0 365 147 243 232 259 9 chr10 21078737 21078849 -119237916 + L2 LINE L2 2946 3085 -228 792 143 41 7 chr10 21078976 21079123 -119237642 - MLT1A1 LTR MaLR -213 152 1 568 309 77 9 chr10 21080370 21080590 -119236175 - MIR SINE MIR -26 236 2 1390 181 15 15 chr10 21080913 21081088 -119235677 - AluJb SINE Alu -3 309 132 396 103 0 0 chr10 21081088 21081146 -119235619 + (TG)n Simple_repeat Simple_repeat 1 58 0 1390 181 15 15 chr10 21081146 21081240 -119235525 - AluJb SINE Alu -179 133 40 830 148 0 16 chr10 21082071 21082199 -119234566 + FLAM_C SINE Alu 3 128 -15 40 59 0 0 chr10 21083622 21083690 -119233075 + AT_rich Low_complexity Low_complexity 1 68 0 258 362 11 6 chr10 21084025 21084202 -119232563 - L1M4 LINE L1 -3585 2561 2384 431 188 20 20 chr10 21084277 21084378 -119232387 + LTR56 LTR ERV1 1 101 -344 556 216 10 0 chr10 21084386 21084488 -119232277 - AluJb SINE Alu -77 235 133 1482 214 3 34 chr10 21084488 21084810 -119231955 - AluJb SINE Alu 0 312 1 2040 127 20 6 chr10 21084810 21085157 -119231608 + LTR56 LTR ERV1 94 445 0 1970 151 7 0 chr10 21085426 21085724 -119231041 - AluSq SINE Alu -13 300 1 1725 182 38 58 chr10 21086190 21086586 -119230179 - MLT1B LTR MaLR -2 388 1 387 249 35 81 chr10 21086673 21086870 -119229895 - HAL1 LINE L1 -899 1608 1421 330 316 158 27 chr10 21087075 21087404 -119229361 - HAL1 LINE L1 -1319 1188 817 225 0 0 0 chr10 21089023 21089048 -119227717 + (T)n Simple_repeat Simple_repeat 1 25 0 766 174 0 27 chr10 21089048 21089197 -119227568 + Tigger1 DNA MER2_type 55 199 -2219 2123 125 7 0 chr10 21089198 21089503 -119227262 - AluSq SINE Alu -6 307 1 4115 134 30 30 chr10 21089771 21090497 -119226268 + Tigger1 DNA MER2_type 192 917 -1501 2837 144 40 6 chr10 21090476 21090956 -119225809 + Tigger1 DNA MER2_type 1920 2415 -3 * 332 356 59 0 chr10 21090966 21091101 -119225664 - MIR3 SINE MIR -61 147 5 5128 99 45 6 chr10 21091539 21092448 -119224317 - L1PA13 LINE L1 -4 6159 5214 6546 179 34 4 chr10 21092461 21093759 -119223006 - L1PA13 LINE L1 -1647 4499 3163 22 56 0 0 chr10 21093897 21093933 -119222832 + AT_rich Low_complexity Low_complexity 1 36 0 288 196 0 20 chr10 21095062 21095113 -119221652 + L3 LINE CR1 1517 1566 -11 620 296 25 20 chr10 21095136 21095332 -119221433 - L2 LINE L2 -1 3312 3116 1200 166 30 21 chr10 21095332 21095567 -119221198 - MSTB LTR MaLR 0 426 190 5523 78 23 18 chr10 21095588 21096357 -119220408 - L1PA10 LINE L1 -4 6164 5392 1033 154 126 0 chr10 21096363 21096538 -119220227 - MSTB LTR MaLR -229 197 1 398 333 77 40 chr10 21096538 21096873 -119219892 - L2 LINE L2 -193 3120 2778 5906 224 82 41 chr10 21097301 21100103 -119216662 - L1MC2 LINE L1 -1 6623 3938 2080 125 4 0 chr10 21100103 21100415 -119216350 + AluSx SINE Alu 1 313 0 5906 224 82 41 chr10 21100415 21100778 -119215987 - L1MC2 LINE L1 -2686 3938 3591 6762 55 8 21 chr10 21100778 21101388 -119215377 + L1PA7 LINE L1 5078 5673 -481 2187 110 0 10 chr10 21101388 21101697 -119215068 + AluSc SINE Alu 1 306 -3 6762 55 8 21 chr10 21101697 21102167 -119214598 + L1PA7 LINE L1 5673 6148 -6 5906 224 82 41 chr10 21102167 21102750 -119214015 - L1MC2 LINE L1 -3033 3591 2710 240 246 33 0 chr10 21102775 21102836 -119213929 - MLT1A1 LTR MaLR -6 359 297 2267 223 11 113 chr10 21102847 21103218 -119213547 - L1MC2 LINE L1 -5716 710 303 2171 90 4 0 chr10 21103218 21103495 -119213270 + AluSg1 SINE Alu 1 278 -31 600 50 0 0 chr10 21103495 21103575 -119213190 + (TAGA)n Simple_repeat Simple_repeat 1 80 0 2267 223 11 113 chr10 21103575 21103856 -119212909 - L1MC2 LINE L1 -6122 304 146 1710 152 58 36 chr10 21103856 21104186 -119212579 + MER1B DNA MER1_type 1 337 0 2267 223 11 113 chr10 21104186 21104311 -119212454 - L1MC2 LINE L1 -6280 146 10 1486 155 174 35 chr10 21104988 21105362 -119211403 + MSTB LTR MaLR 1 426 0 21 57 0 0 chr10 21105495 21105530 -119211235 + AT_rich Low_complexity Low_complexity 1 35 0 1948 87 36 71 chr10 21107331 21107640 -119209125 - AluY SINE Alu -13 298 1 241 130 19 19 chr10 21107852 21107906 -119208859 + (TA)n Simple_repeat Simple_repeat 2 55 0 261 0 0 0 chr10 21109519 21109548 -119207217 + (TTG)n Simple_repeat Simple_repeat 2 30 0 191 283 192 17 chr10 21109719 21109839 -119206926 + L2 LINE L2 772 912 -2402 226 284 11 45 chr10 21110040 21110128 -119206637 - MIR SINE MIR -27 235 151 21 71 0 0 chr10 21110795 21110837 -119205928 + AT_rich Low_complexity Low_complexity 1 42 0 205 37 37 56 chr10 21110838 21110892 -119205873 + (TTA)n Simple_repeat Simple_repeat 1 53 0 278 226 48 0 chr10 21110918 21111042 -119205723 + (TA)n Simple_repeat Simple_repeat 2 131 0 1655 232 68 18 chr10 21113757 21114197 -119202568 + MLT1C LTR MaLR 6 467 0 341 283 20 10 chr10 21115422 21115521 -119201244 + L2 LINE L2 3208 3307 -6 473 291 91 17 chr10 21115755 21115930 -119200835 + MIR3 SINE MIR 19 206 -2 771 244 0 6 chr10 21116277 21116433 -119200332 - MER8 DNA MER2_type 0 239 85 559 258 0 0 chr10 21116434 21116554 -119200211 + MER63 DNA MER1_type 673 792 -270 318 26 0 0 chr10 21116660 21116699 -119200066 + (CA)n Simple_repeat Simple_repeat 1 39 0 312 220 40 40 chr10 21117170 21117270 -119199495 - LTR67 LTR ERVL -21 536 437 204 208 38 0 chr10 21118891 21118944 -119197821 + (TA)n Simple_repeat Simple_repeat 2 56 0 * 208 151 0 57 chr10 21118909 21118962 -119197803 + (TATAA)n Simple_repeat Simple_repeat 3 52 0 1913 143 0 0 chr10 21119588 21119853 -119196912 + AluSx SINE Alu 3 267 -45 22 0 0 0 chr10 21121322 21121344 -119195421 + AT_rich Low_complexity Low_complexity 1 22 0 30950 33 16 2 chr10 21122369 21128429 -119188336 - L1PA3 LINE L1 0 6155 2 1916 150 0 0 chr10 21129837 21130117 -119186648 - AluSx SINE Alu -30 282 3 374 57 19 0 chr10 21130353 21130406 -119186359 + (TAGA)n Simple_repeat Simple_repeat 2 55 0 593 121 61 0 chr10 21131425 21131590 -119185175 + (TA)n Simple_repeat Simple_repeat 2 176 0 216 67 0 0 chr10 21131878 21131908 -119184857 + (TG)n Simple_repeat Simple_repeat 1 30 0 2421 136 36 45 chr10 21131911 21132381 -119184384 - L1MC1 LINE L1 -11 6322 5857 1933 140 10 7 chr10 21132663 21132970 -119183795 - AluSq SINE Alu -1 312 5 947 269 87 39 chr10 21133317 21133730 -119183035 - LTR16A LTR ERVL 0 450 18 516 32 0 0 chr10 21133905 21133967 -119182798 + (CA)n Simple_repeat Simple_repeat 2 63 0 239 269 37 90 chr10 21134970 21135104 -119181661 + MIR3 SINE MIR 77 203 -5 4713 102 7 1 chr10 21135481 21136167 -119180598 + L1PB2 LINE L1 5460 6149 -2 364 262 101 40 chr10 21137147 21137296 -119179469 + MIR SINE MIR 49 206 -56 29 0 0 0 chr10 21137463 21137492 -119179273 + AT_rich Low_complexity Low_complexity 1 29 0 1767 166 3 32 chr10 21137624 21137938 -119178827 + AluJo SINE Alu 1 305 -7 649 196 0 12 chr10 21137939 21138102 -119178663 + GA-rich Low_complexity Low_complexity 2 162 0 191 300 69 46 chr10 21138759 21138889 -119177876 - L2 LINE L2 0 3313 3181 228 319 14 0 chr10 21138954 21139023 -119177742 + L1ME2 LINE L1 6008 6077 -87 994 217 14 14 chr10 21139423 21139640 -119177125 + U3 snRNA snRNA 1 217 0 600 346 101 23 chr10 21139650 21140306 -119176459 - L2 LINE L2 -834 2480 1774 221 179 0 0 chr10 21140613 21140652 -119176113 + A-rich Low_complexity Low_complexity 1 39 0 459 329 26 0 chr10 21141043 21141198 -119175567 - LTR33 LTR ERVL -360 161 3 196 307 69 30 chr10 21141465 21141566 -119175199 + MIR SINE MIR 114 218 -44 1466 219 23 13 chr10 21142052 21142358 -119174407 - AluJo SINE Alu -3 309 1 25 31 0 0 chr10 21142358 21142390 -119174375 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr10 21142648 21142672 -119174093 + AT_rich Low_complexity Low_complexity 1 24 0 262 294 0 11 chr10 21143108 21143200 -119173565 + (TA)n Simple_repeat Simple_repeat 2 92 0 3676 144 31 69 chr10 21143217 21143373 -119173392 + Tigger1 DNA MER2_type 1 161 -2257 7342 43 4 0 chr10 21143373 21144873 -119171892 - L1PA5 LINE L1 -1 6153 4651 3676 144 31 69 chr10 21144873 21145424 -119171341 + Tigger1 DNA MER2_type 161 681 -1737 2092 142 12 6 chr10 21145561 21145905 -119170860 + Tigger1 DNA MER2_type 714 1059 -1359 847 208 0 6 chr10 21145936 21146104 -119170661 + Tigger1 DNA MER2_type 2252 2418 0 1849 133 13 41 chr10 21146326 21146642 -119170123 - AluSx SINE Alu -3 309 3 213 94 0 0 chr10 21146648 21146680 -119170085 + (T)n Simple_repeat Simple_repeat 1 32 0 25 0 0 0 chr10 21146814 21146839 -119169926 + AT_rich Low_complexity Low_complexity 1 25 0 1171 202 40 21 chr10 21148388 21148722 -119168043 - MLT1B LTR MaLR 0 390 4 210 118 0 0 chr10 21151117 21151151 -119165614 + (ATG)n Simple_repeat Simple_repeat 2 35 0 1737 175 31 8 chr10 21151258 21151613 -119165152 - L1MA6 LINE L1 0 6300 5938 643 292 59 9 chr10 21151898 21152117 -119164648 + MIR SINE MIR 26 255 -7 202 174 43 0 chr10 21152144 21152190 -119164575 + GA-rich Low_complexity Low_complexity 3 50 0 1973 148 107 18 chr10 21153740 21154131 -119162634 - MSTA LTR MaLR -2 426 1 352 330 140 61 chr10 21154415 21154887 -119161878 + L2 LINE L2 2235 2743 -571 469 266 203 10 chr10 21155272 21155479 -119161286 - MIR SINE MIR -9 253 7 258 180 0 0 chr10 21155651 21155701 -119161064 + L1MA6 LINE L1 6251 6300 0 1430 123 8 0 chr10 21156175 21156410 -119160355 + L1MA5A LINE L1 6059 6295 -2 1663 197 10 7 chr10 21156412 21156712 -119160053 + AluJo SINE Alu 1 301 -11 37 39 0 0 chr10 21156737 21156788 -119159977 + AT_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr10 21157333 21157354 -119159411 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 21157497 21157518 -119159247 + AT_rich Low_complexity Low_complexity 1 21 0 295 98 48 17 chr10 21159087 21159151 -119157614 + L1PA13 LINE L1 6065 6129 -34 5493 121 8 4 chr10 21159189 21160025 -119156740 - L1PA13 LINE L1 -55 6108 5269 324 332 98 59 chr10 21160142 21160428 -119156337 + L2 LINE L2 2056 2352 -962 235 185 169 0 chr10 21160702 21160767 -119155998 + Charlie2 DNA MER1_type 2228 2303 -559 595 152 98 9 chr10 21161204 21161345 -119155420 + AluJb SINE Alu 161 311 0 624 260 121 26 chr10 21161356 21161479 -119155286 + Charlie2 DNA MER1_type 2442 2552 -310 1349 118 74 22 chr10 21161479 21161708 -119155057 - L1PA15 LINE L1 0 6165 5925 624 260 121 26 chr10 21161708 21161965 -119154800 + Charlie2 DNA MER1_type 2552 2858 -4 26 30 0 0 chr10 21162558 21162591 -119154174 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr10 21162650 21162679 -119154086 + AT_rich Low_complexity Low_complexity 1 29 0 280 318 60 34 chr10 21162847 21163196 -119153569 + HAL1b LINE L1 67 424 -924 377 293 131 41 chr10 21163222 21163924 -119152841 + L1MC/D LINE L1 3893 4657 -1489 364 329 35 48 chr10 21164132 21164363 -119152402 + L1MC/D LINE L1 4807 5034 -1112 2422 177 22 84 chr10 21164717 21165264 -119151501 - MLT2B2 LTR ERVL -2 513 1 984 248 138 21 chr10 21165269 21165652 -119151113 + L1MC/D LINE L1 5373 5800 -2008 2148 123 6 22 chr10 21165924 21166240 -119150525 + AluSx SINE Alu 1 311 -1 704 227 71 0 chr10 21166261 21166402 -119150363 + FRAM SINE Alu 1 151 -15 233 372 41 8 chr10 21166409 21166530 -119150235 - MIR SINE MIR -128 134 10 229 360 12 12 chr10 21166878 21166964 -119149801 + MIR SINE MIR 29 114 -148 795 316 78 73 chr10 21167602 21168775 -119147990 + L1ME LINE L1 4046 5224 -922 1780 127 12 82 chr10 21168796 21169127 -119147638 + AluSx SINE Alu 1 308 -4 401 312 66 68 chr10 21169316 21169755 -119147010 + L1ME LINE L1 5321 5758 -363 5929 108 31 4 chr10 21172338 21173313 -119143452 - L1PA13 LINE L1 -11 6152 5167 518 333 93 35 chr10 21173331 21173782 -119142983 - LTR33 LTR ERVL -1 520 44 2095 136 3 0 chr10 21174290 21174584 -119142181 + AluSx SINE Alu 1 295 -17 593 156 0 90 chr10 21175022 21175144 -119141621 - 5S rRNA rRNA -1 120 10 2074 143 0 6 chr10 21175167 21175481 -119141284 - AluSx SINE Alu 0 312 1 180 0 0 0 chr10 21176158 21176178 -119140587 + (CAA)n Simple_repeat Simple_repeat 2 21 0 262 271 6 73 chr10 21176831 21177008 -119139757 + L1MEd LINE L1 977 1141 -4978 28 48 0 0 chr10 21177201 21177243 -119139522 + AT_rich Low_complexity Low_complexity 1 42 0 853 167 0 0 chr10 21177248 21177386 -119139379 - AluSg/x SINE Alu -19 293 156 2228 118 0 0 chr10 21177876 21178173 -119138592 + AluSx SINE Alu 1 297 -15 2446 90 0 0 chr10 21179078 21179388 -119137377 + AluSq SINE Alu 1 310 -3 2159 114 3 7 chr10 21181340 21181646 -119135119 - AluSq SINE Alu -6 307 3 22 35 0 0 chr10 21181750 21181779 -119134986 + AT_rich Low_complexity Low_complexity 1 29 0 2073 98 0 46 chr10 21184409 21184715 -119132050 + AluSq SINE Alu 1 292 -21 1083 282 144 2 chr10 21185027 21185449 -119131316 + LTR33 LTR ERVL 32 513 -8 196 382 0 0 chr10 21186128 21186183 -119130582 - MIR SINE MIR -167 95 41 6165 41 1 0 chr10 21186488 21187236 -119129529 + L1PA4 LINE L1 5406 6154 -1 29 28 0 0 chr10 21187252 21187288 -119129477 + AT_rich Low_complexity Low_complexity 1 36 0 2096 124 0 3 chr10 21187667 21187965 -119128800 + AluSx SINE Alu 1 297 -15 248 279 38 25 chr10 21188039 21188118 -119128647 + L2 LINE L2 3232 3311 -2 307 242 113 57 chr10 21188831 21188955 -119127810 + MER94 DNA DNA 1 131 -3 605 304 12 21 chr10 21189110 21189350 -119127415 + L1MEc LINE L1 779 1016 -6122 559 238 28 18 chr10 21190078 21190090 -119126675 + L1MEc LINE L1 1538 1548 -5470 6159 87 24 2 chr10 21190090 21191368 -119125397 - L1PA14 LINE L1 -2 6159 4856 559 238 28 18 chr10 21191368 21191613 -119125152 + L1MEc LINE L1 1548 1936 -5082 494 308 47 49 chr10 21191596 21192005 -119124760 + L1MEc LINE L1 2339 2746 -4392 * 185 214 24 0 chr10 21192909 21192951 -119123814 - MIR SINE MIR -3 259 217 596 240 26 52 chr10 21193153 21193345 -119123420 - LTR67 LTR ERVL -7 550 364 312 355 0 0 chr10 21193444 21193554 -119123211 - LTR67 LTR ERVL -346 211 102 216 387 13 13 chr10 21193712 21193862 -119122903 - L2 LINE L2 -414 2900 2751 228 205 0 0 chr10 21193982 21194021 -119122744 + AluJ/monomer SINE Alu 1 39 -261 529 266 29 7 chr10 21194105 21194244 -119122521 - MIR SINE MIR -112 150 9 21 0 0 0 chr10 21194530 21194551 -119122214 + AT_rich Low_complexity Low_complexity 1 21 0 1634 163 0 8 chr10 21194551 21194808 -119121957 - AluJo SINE Alu -21 291 37 229 26 53 0 chr10 21196507 21196545 -119120220 + (TTG)n Simple_repeat Simple_repeat 2 41 0 192 234 0 0 chr10 21196818 21196865 -119119900 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 243 43 0 0 chr10 21196869 21196915 -119119850 + LTR66 LTR ERVL 394 439 -171 683 273 67 25 chr10 21197231 21197469 -119119296 + MIR SINE MIR 15 262 0 888 162 35 0 chr10 21198902 21199100 -119117665 - L1MA2 LINE L1 0 6304 6100 2339 108 0 0 chr10 21199211 21199517 -119117248 + AluSp SINE Alu 1 306 -7 235 314 9 57 chr10 21199617 21199722 -119117043 + MIR SINE MIR 107 206 -56 239 54 27 0 chr10 21199833 21199870 -119116895 + (CA)n Simple_repeat Simple_repeat 2 39 0 320 301 35 64 chr10 21199906 21200079 -119116686 + MIR3 SINE MIR 34 201 -7 480 286 56 6 chr10 21200585 21200746 -119116019 - MIR SINE MIR 0 262 94 26 0 0 0 chr10 21200852 21200878 -119115887 + AT_rich Low_complexity Low_complexity 1 26 0 23 78 0 0 chr10 21201048 21201099 -119115666 + AT_rich Low_complexity Low_complexity 1 51 0 7032 39 1 0 chr10 21202293 21203142 -119113623 + L1PA4 LINE L1 5305 6154 -1 189 378 51 11 chr10 21203921 21204038 -119112727 - MIR SINE MIR -76 132 5 3603 141 0 3 chr10 21204370 21204943 -119111822 - L1PB4 LINE L1 0 6156 5586 669 260 37 98 chr10 21205125 21205533 -119111232 - L1MDa LINE L1 -6123 417 35 180 0 0 0 chr10 21205552 21205572 -119111193 + (TAAAA)n Simple_repeat Simple_repeat 5 24 0 34 0 0 0 chr10 21206037 21206071 -119110694 + AT_rich Low_complexity Low_complexity 1 34 0 1140 203 101 85 chr10 21206357 21206594 -119110171 - MER34B LTR ERV1 0 565 333 207 0 0 0 chr10 21206594 21206617 -119110148 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1140 203 101 85 chr10 21206617 21206931 -119109834 - MER34B LTR ERV1 -232 333 5 1497 359 54 34 chr10 21207105 21208068 -119108697 + L2 LINE L2 206 1187 -2127 358 334 140 50 chr10 21208082 21208519 -119108246 + HAL1 LINE L1 14 489 -2018 776 163 7 22 chr10 21208520 21208655 -119108110 + FLAM_C SINE Alu 1 133 0 2055 173 8 19 chr10 21208714 21208753 -119108012 - MLT1A1 LTR MaLR 0 365 327 2141 156 68 24 chr10 21208753 21208940 -119107825 + MSTA LTR MaLR 1 178 -250 180 0 0 0 chr10 21208940 21208960 -119107805 + (TC)n Simple_repeat Simple_repeat 2 21 0 2141 156 68 24 chr10 21208960 21209182 -119107583 + MSTA LTR MaLR 178 428 0 2055 173 8 19 chr10 21209182 21209511 -119107254 - MLT1A1 LTR MaLR -38 327 1 755 248 129 118 chr10 21209746 21211140 -119105625 + HAL1 LINE L1 758 2166 -341 363 23 0 0 chr10 21211412 21211456 -119105309 + (CA)n Simple_repeat Simple_repeat 1 44 0 189 397 0 32 chr10 21211463 21211589 -119105176 + L2 LINE L2 1233 1354 -1960 319 302 23 16 chr10 21211875 21212004 -119104761 + L2 LINE L2 1698 1827 -1487 319 245 163 0 chr10 21212087 21212185 -119104580 + L2 LINE L2 3185 3298 -15 1729 53 0 49 chr10 21212225 21212450 -119104315 - AluY SINE Alu -13 298 85 1902 157 0 26 chr10 21212681 21212993 -119103772 + AluSx SINE Alu 1 304 -8 207 200 0 22 chr10 21213269 21213314 -119103451 + T-rich Low_complexity Low_complexity 4 47 0 21 0 0 0 chr10 21213620 21213641 -119103124 + AT_rich Low_complexity Low_complexity 1 21 0 2173 119 7 0 chr10 21213759 21214069 -119102696 - AluSx SINE Alu 0 312 1 2319 78 0 16 chr10 21214446 21214753 -119102012 + AluY SINE Alu 1 302 -9 249 264 38 0 chr10 21215168 21215274 -119101491 + (TA)n Simple_repeat Simple_repeat 2 111 0 317 368 52 52 chr10 21215304 21215554 -119101211 - L2 LINE L2 -170 3143 2894 180 327 0 0 chr10 21215615 21215670 -119101095 + L2 LINE L2 3245 3299 -14 267 206 88 0 chr10 21216726 21216794 -119099971 + MIR SINE MIR 109 182 -80 967 192 29 0 chr10 21216794 21216966 -119099799 + MER5A DNA MER1_type 1 177 -12 199 338 86 56 chr10 21217283 21217517 -119099248 - L2 LINE L2 -221 3051 2811 23965 147 14 12 chr10 21218022 21223202 -119093563 - L1PA10 LINE L1 -11 6157 961 735 158 178 0 chr10 21223204 21223350 -119093415 - AluSc SINE Alu -12 297 126 824 149 0 8 chr10 21224357 21224491 -119092274 + AluSq/x SINE Alu 1 133 -179 271 296 132 13 chr10 21224773 21224925 -119091840 - MIR SINE MIR -73 189 20 2790 67 0 21 chr10 21225108 21225484 -119091281 - L1PA8 LINE L1 -2 6170 5803 397 284 92 7 chr10 21225574 21225715 -119091050 + MIR SINE MIR 107 259 -3 1946 157 13 0 chr10 21225819 21226118 -119090647 + AluSx SINE Alu 1 303 -9 21 0 0 0 chr10 21226446 21226467 -119090298 + AT_rich Low_complexity Low_complexity 1 21 0 296 313 0 25 chr10 21226677 21226757 -119090008 + L2 LINE L2 3186 3263 -9 348 308 20 53 chr10 21226832 21227042 -119089723 - MLT1K LTR MaLR -12 603 374 3868 169 13 4 chr10 21227373 21228071 -119088694 - MER50 LTR ERV1 -30 704 1 354 205 0 0 chr10 21229060 21229138 -119087627 + MADE1 DNA Mariner 3 80 0 2059 118 0 20 chr10 21229235 21229260 -119087505 - AluSx SINE Alu 0 308 284 657 0 0 0 chr10 21229260 21229333 -119087432 + (TTATG)n Simple_repeat Simple_repeat 2 74 0 2059 118 0 20 chr10 21229333 21229621 -119087144 - AluSx SINE Alu -24 284 1 1555 193 33 0 chr10 21229637 21229911 -119086854 - AluJo SINE Alu -29 283 1 219 114 0 0 chr10 21230583 21230618 -119086147 + (TG)n Simple_repeat Simple_repeat 2 36 0 24 0 0 0 chr10 21232073 21232097 -119084668 + AT_rich Low_complexity Low_complexity 1 24 0 306 167 22 11 chr10 21232101 21232191 -119084574 + (TAGA)n Simple_repeat Simple_repeat 1 91 0 344 129 0 57 chr10 21234044 21234136 -119082629 + (TA)n Simple_repeat Simple_repeat 2 87 -31 12792 38 7 0 chr10 21234136 21236467 -119080298 + L1PA5 LINE L1 3805 6146 -8 344 129 0 57 chr10 21236467 21236498 -119080267 + (TA)n Simple_repeat Simple_repeat 87 118 0 2370 124 19 35 chr10 21236606 21236751 -119080014 - THE1B LTR MaLR 0 364 218 2255 115 0 19 chr10 21236751 21237064 -119079701 - AluSg SINE Alu -2 308 2 2370 124 19 35 chr10 21237064 21237288 -119079477 - THE1B LTR MaLR -146 218 1 1826 154 17 30 chr10 21237868 21238166 -119078599 + AluSx SINE Alu 3 296 -16 180 125 0 0 chr10 21238371 21238403 -119078362 + (GA)n Simple_repeat Simple_repeat 2 33 0 1903 195 56 0 chr10 21238403 21238797 -119077968 - MLT2C2 LTR ERVL -48 416 1 202 266 25 13 chr10 21238964 21239043 -119077722 + CT-rich Low_complexity Low_complexity 2 81 0 2866 53 6 3 chr10 21240085 21240470 -119076295 + L1PA8 LINE L1 5794 6179 0 257 242 61 0 chr10 21240517 21240583 -119076182 + GA-rich Low_complexity Low_complexity 1 70 0 2174 169 60 7 chr10 21240796 21241199 -119075566 - MSTA LTR MaLR 0 428 5 360 0 0 0 chr10 21241263 21241303 -119075462 + (CA)n Simple_repeat Simple_repeat 2 41 0 1706 158 40 4 chr10 21242118 21242390 -119074375 + AluJb SINE Alu 1 282 -30 284 226 58 51 chr10 21242590 21242727 -119074038 + Charlie2 DNA MER1_type 67 204 -2658 333 606 0 11 chr10 21242899 21243079 -119073686 + polypyrimidine Low_complexity Low_complexity 3 180 0 249 141 50 50 chr10 21243063 21243184 -119073581 + CT-rich Low_complexity Low_complexity 2 122 0 * 247 335 39 0 chr10 21243238 21243420 -119073345 + Charlie2a DNA MER1_type 1474 1662 -1200 369 277 9 0 chr10 21243443 21243555 -119073210 + Charlie2a DNA MER1_type 2749 2861 -1 2128 148 0 0 chr10 21244920 21245230 -119071535 + AluSx SINE Alu 1 310 -2 1306 218 76 17 chr10 21245535 21245879 -119070886 - MLT1A2 LTR MaLR -6 368 5 711 192 0 0 chr10 21246172 21246297 -119070468 + AluJb SINE Alu 1 125 -187 354 134 0 0 chr10 21246950 21247017 -119069748 + (TCC)n Simple_repeat Simple_repeat 3 69 0 1686 110 3 116 chr10 21247609 21247951 -119068814 - AluSq SINE Alu 0 315 9 328 252 62 86 chr10 21247993 21248203 -119068562 + LTR33 LTR ERVL 12 216 -305 757 155 4 23 chr10 21248278 21248544 -119068221 + CT-rich Low_complexity Low_complexity 1 261 0 429 268 71 11 chr10 21248545 21248728 -119068037 + LTR33 LTR ERVL 327 520 -1 1554 154 30 77 chr10 21248974 21249272 -119067493 + AluSx SINE Alu 1 284 -28 42 0 0 0 chr10 21249295 21249337 -119067428 + AT_rich Low_complexity Low_complexity 1 42 0 1513 225 0 25 chr10 21249633 21249953 -119066812 - AluJo SINE Alu 0 312 1 2319 104 0 3 chr10 21249960 21250269 -119066496 - AluSx SINE Alu -3 309 2 1601 146 30 86 chr10 21250431 21250732 -119066033 + AluSx SINE Alu 1 284 -28 191 159 23 23 chr10 21250852 21250896 -119065869 + MIR3 SINE MIR 156 199 -9 282 200 88 0 chr10 21251313 21251393 -119065372 + FRAM SINE Alu 55 141 -25 281 176 0 0 chr10 21251813 21251864 -119064901 + CT-rich Low_complexity Low_complexity 3 53 0 429 268 71 11 chr10 21251865 21252048 -119064717 + LTR33 LTR ERVL 327 520 -1 1625 148 30 74 chr10 21252294 21252591 -119064174 + AluSx SINE Alu 1 284 -28 191 159 23 23 chr10 21252711 21252755 -119064010 + MIR3 SINE MIR 156 199 -9 615 165 10 10 chr10 21253166 21253269 -119063496 + FRAM SINE Alu 46 148 -28 358 298 85 0 chr10 21254510 21254604 -119062161 - L2 LINE L2 -9 3304 3203 3017 121 76 0 chr10 21254873 21255335 -119061430 - LOR1a LTR ERV1 0 497 1 308 189 15 106 chr10 21256075 21256207 -119060558 - MER5C DNA MER1_type 0 324 205 730 92 0 25 chr10 21256212 21256332 -119060433 + LTR9B LTR ERV1 445 561 -83 712 227 74 0 chr10 21256335 21256538 -119060227 - MER5C DNA MER1_type -106 218 1 4009 149 37 36 chr10 21257039 21257823 -119058942 - LTR1 LTR ERV1 0 785 1 298 265 0 0 chr10 21258132 21258215 -119058550 - L1ME4a LINE L1 -93 6028 5946 697 194 15 15 chr10 21258340 21258541 -119058224 - Charlie1a DNA MER1_type -6 1449 1249 25 51 0 0 chr10 21258541 21258580 -119058185 + AT_rich Low_complexity Low_complexity 1 39 0 2188 144 24 92 chr10 21258774 21259231 -119057534 - MSTB LTR MaLR 0 426 1 328 238 59 0 chr10 21259271 21259372 -119057393 - Charlie1a DNA MER1_type -311 1144 1038 2302 125 59 7 chr10 21259372 21259779 -119056986 + MSTA LTR MaLR 1 428 0 * 2849 215 50 80 chr10 21259779 21260847 -119055918 - Charlie1a DNA MER1_type -417 1038 3 327 85 0 0 chr10 21260851 21260898 -119055867 - MSTB LTR MaLR 0 426 380 1740 169 0 0 chr10 21260898 21261152 -119055613 + AluSx SINE Alu 1 254 -58 255 31 0 0 chr10 21261164 21261196 -119055569 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 1102 99 6 11 chr10 21261199 21261380 -119055385 + (GAA)n Simple_repeat Simple_repeat 1 180 0 204 40 0 0 chr10 21261382 21261407 -119055358 + (CAG)n Simple_repeat Simple_repeat 2 26 0 2072 179 13 5 chr10 21261417 21261803 -119054962 - MSTB LTR MaLR -37 389 1 362 320 88 0 chr10 21261807 21262001 -119054764 - L1ME4a LINE L1 -270 5851 5641 1154 204 82 22 chr10 21262045 21262314 -119054451 + AluJo SINE Alu 1 285 -17 777 76 0 0 chr10 21262315 21262420 -119054345 + (TA)n Simple_repeat Simple_repeat 1 105 0 314 200 33 33 chr10 21262977 21263067 -119053698 - L1MC4 LINE L1 -1340 6702 6613 357 339 15 15 chr10 21265872 21266002 -119050763 - L2 LINE L2 -2 3270 3141 228 307 23 34 chr10 21266000 21266088 -119050677 + MIR3 SINE MIR 116 202 -6 * 1978 168 0 0 chr10 21266101 21266405 -119050360 + AluJo SINE Alu 2 305 -7 1821 170 0 26 chr10 21267237 21267548 -119049217 + AluJo SINE Alu 1 303 -9 1198 144 0 0 chr10 21267690 21267864 -119048901 + FRAM SINE Alu 1 167 -9 4119 197 35 19 chr10 21268525 21268945 -119047820 + L1MB4 LINE L1 4152 4564 -1616 2410 117 11 16 chr10 21268945 21269320 -119047445 + THE1C LTR MaLR 3 375 0 4119 197 35 19 chr10 21269320 21270888 -119045877 + L1MB4 LINE L1 4564 6162 -18 25 0 0 0 chr10 21270894 21270919 -119045846 + AT_rich Low_complexity Low_complexity 1 25 0 463 136 0 0 chr10 21270926 21271007 -119045758 + L1MB8 LINE L1 6097 6177 -1 249 303 0 13 chr10 21273292 21273368 -119043397 + (TG)n Simple_repeat Simple_repeat 2 76 0 198 0 0 0 chr10 21273379 21273401 -119043364 + (TG)n Simple_repeat Simple_repeat 2 23 0 2773 16 0 3 chr10 21273509 21273821 -119042944 - AluY SINE Alu 0 311 1 243 125 0 0 chr10 21274595 21274635 -119042130 + (CA)n Simple_repeat Simple_repeat 1 40 0 1073 154 127 0 chr10 21275150 21275277 -119041488 - L1MA9 LINE L1 -14 6298 6189 252 0 0 0 chr10 21275277 21275305 -119041460 + (TG)n Simple_repeat Simple_repeat 1 28 0 1073 154 127 0 chr10 21275305 21275436 -119041329 - L1MA9 LINE L1 -123 6189 6007 2325 104 0 0 chr10 21276050 21276347 -119040418 - AluSq SINE Alu -16 297 1 849 234 34 75 chr10 21277016 21277485 -119039280 - L1MC5 LINE L1 -90 7871 7422 37 0 0 0 chr10 21277486 21277523 -119039242 + AT_rich Low_complexity Low_complexity 1 37 0 306 299 112 52 chr10 21278561 21279123 -119037642 - MLT1L LTR MaLR -6 609 14 1397 229 16 10 chr10 21279948 21280336 -119036429 - L1M4 LINE L1 -3028 3929 3540 * 1719 240 63 63 chr10 21280335 21281583 -119035182 - L1M4 LINE L1 -4833 2022 858 1351 194 48 35 chr10 21281586 21281875 -119034890 - AluJo SINE Alu -6 306 14 2184 112 0 3 chr10 21281952 21282255 -119034510 - AluSx SINE Alu -10 302 1 1099 308 70 35 chr10 21282262 21282345 -119034420 - L1M4 LINE L1 -6052 807 728 1887 112 32 18 chr10 21282345 21282623 -119034142 + AluSx SINE Alu 3 284 -28 1099 308 70 35 chr10 21282623 21283251 -119033514 - L1M4 LINE L1 -6131 728 11 1644 167 52 46 chr10 21283277 21283436 -119033329 - LTR35 LTR ERV1 0 618 461 2188 96 23 0 chr10 21283436 21283737 -119033028 + AluSg SINE Alu 1 308 -2 1644 167 52 46 chr10 21283737 21283781 -119032984 - LTR35 LTR ERV1 -157 461 419 2748 191 5 45 chr10 21283781 21283821 -119032944 + MER41D LTR ERV1 1 41 -516 1932 126 0 24 chr10 21283821 21284114 -119032651 - AluY SINE Alu -17 294 9 2748 191 5 45 chr10 21284114 21284653 -119032112 + MER41D LTR ERV1 41 557 0 1644 167 52 46 chr10 21284653 21284814 -119031951 - LTR35 LTR ERV1 -199 419 251 1592 145 40 48 chr10 21284829 21285181 -119031584 + LTR23 LTR ERV1 89 437 0 215 381 79 7 chr10 21285299 21285438 -119031327 - L2 LINE L2 -2 3270 3122 361 339 101 31 chr10 21285699 21286056 -119030709 - L2 LINE L2 -665 2649 2268 917 99 11 17 chr10 21286113 21286294 -119030471 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2081 133 13 7 chr10 21286294 21286734 -119030031 - AluSx SINE Alu 0 442 1 1275 181 4 4 chr10 21286875 21287129 -119029636 - L1MA6 LINE L1 0 6300 6047 892 196 108 5 chr10 21287204 21287418 -119029347 - MER46A DNA MER2_type 0 236 1 2805 16 0 9 chr10 21288992 21289309 -119027456 + AluYb8 SINE Alu 1 314 -4 183 398 43 0 chr10 21289592 21289685 -119027080 - L2 LINE L2 -26 3246 3150 1912 202 6 3 chr10 21290275 21290637 -119026128 - MLT1A1 LTR MaLR -2 363 1 251 289 24 24 chr10 21290782 21290865 -119025900 + MIR SINE MIR 76 158 -104 1940 166 10 0 chr10 21291325 21291633 -119025132 - AluSx SINE Alu -1 311 1 2212 157 53 22 chr10 21292322 21292545 -119024220 - MSTB LTR MaLR 0 426 182 2277 84 0 0 chr10 21292545 21292854 -119023911 - AluSp SINE Alu 0 309 1 2212 157 53 22 chr10 21292854 21293042 -119023723 - MSTB LTR MaLR -244 182 1 340 169 0 46 chr10 21293561 21293626 -119023139 + L2 LINE L2 3201 3262 -10 24 67 0 0 chr10 21293636 21293681 -119023084 + AT_rich Low_complexity Low_complexity 1 45 0 22 103 0 0 chr10 21293770 21293848 -119022917 + AT_rich Low_complexity Low_complexity 1 78 0 192 77 0 0 chr10 21294918 21294944 -119021821 + (CA)n Simple_repeat Simple_repeat 1 26 0 466 225 0 0 chr10 21294948 21295037 -119021728 + MLT1A2 LTR MaLR 5 93 -281 1015 123 0 13 chr10 21295037 21295191 -119021574 + AluSg/x SINE Alu 158 309 -1 648 267 95 30 chr10 21295642 21295741 -119021024 - MIR SINE MIR -1 261 170 6091 168 36 17 chr10 21295741 21296948 -119019817 + Tigger3b DNA MER2_type 1 1230 -1 648 267 95 30 chr10 21296948 21297080 -119019685 - MIR SINE MIR -92 170 15 753 285 46 29 chr10 21298348 21298820 -119017945 - L1ME3A LINE L1 -71 6093 5591 296 296 39 58 chr10 21298851 21299057 -119017708 - MLT1J LTR MaLR -309 202 1 212 294 119 24 chr10 21299063 21299189 -119017576 + L2 LINE L2 2386 2523 -791 214 203 0 17 chr10 21299339 21299398 -119017367 + A-rich Low_complexity Low_complexity 3 60 0 5656 171 16 2 chr10 21299818 21301816 -119014949 + L1PA13 LINE L1 4168 6159 -4 303 191 22 11 chr10 21302251 21302340 -119014425 + CT-rich Low_complexity Low_complexity 2 91 0 811 321 71 42 chr10 21302743 21303359 -119013406 + Tigger8 DNA MER2_type 24 657 -9 393 321 129 5 chr10 21303702 21303895 -119012870 + MIR SINE MIR 45 261 -1 266 325 25 25 chr10 21305549 21305669 -119011096 - MIR SINE MIR -71 191 72 1815 179 117 28 chr10 21306971 21307367 -119009398 + MLT1D LTR MaLR 32 470 -35 1459 209 3 10 chr10 21307367 21307546 -119009219 - AluJo SINE Alu -13 299 121 393 22 0 0 chr10 21307546 21307592 -119009173 + (TTA)n Simple_repeat Simple_repeat 3 48 0 1459 209 3 10 chr10 21307592 21307713 -119009052 - AluJo SINE Alu -191 121 1 1815 179 117 28 chr10 21307713 21307745 -119009020 + MLT1D LTR MaLR 470 498 -7 477 256 55 6 chr10 21307766 21307930 -119008835 - L1ME LINE L1 -307 5814 5643 1833 169 3 3 chr10 21307944 21308251 -119008514 + AluJb SINE Alu 1 307 -5 23 0 0 0 chr10 21308289 21308312 -119008453 + AT_rich Low_complexity Low_complexity 1 23 0 455 269 29 0 chr10 21308471 21308575 -119008190 - U6 snRNA snRNA 0 107 1 1157 141 4 98 chr10 21309149 21309383 -119007382 + AluJb SINE Alu 85 296 -16 1894 123 18 21 chr10 21309385 21309698 -119007067 + AluSx SINE Alu 1 312 0 2161 100 0 4 chr10 21310441 21310747 -119006018 + AluSx SINE Alu 2 306 0 525 242 83 0 chr10 21310794 21310914 -119005851 + FLAM_A SINE Alu 1 130 -3 301 306 0 97 chr10 21311061 21311247 -119005518 + MER5A DNA MER1_type 3 170 -19 180 0 0 0 chr10 21311384 21311404 -119005361 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2115 97 4 4 chr10 21311404 21311682 -119005083 - AluSq SINE Alu -33 280 3 1532 156 0 33 chr10 21311988 21312232 -119004533 + AluJb SINE Alu 1 236 -76 185 83 28 0 chr10 21312257 21312293 -119004472 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 236 196 0 0 chr10 21312297 21312348 -119004417 + LTR66 LTR ERVL 389 439 -171 856 213 6 0 chr10 21312356 21312520 -119004245 + FRAM SINE Alu 1 165 -11 2500 178 83 99 chr10 21312650 21313387 -119003378 + LTR8A LTR ERV1 1 725 -2 1953 146 0 27 chr10 21313474 21313769 -119002996 + AluJb SINE Alu 1 287 -25 1689 172 61 22 chr10 21314440 21314801 -119001964 - THE1C LTR MaLR 0 375 1 2260 156 9 36 chr10 21316810 21317167 -118999598 + L1MB3 LINE L1 5742 6086 -97 1965 155 0 0 chr10 21317167 21317458 -118999307 - AluSx SINE Alu -21 291 1 2260 156 9 36 chr10 21317458 21317550 -118999215 + L1MB3 LINE L1 6086 6179 -4 1425 153 118 38 chr10 21317978 21318265 -118998500 - AluJb SINE Alu -2 310 1 25 31 0 0 chr10 21318633 21318665 -118998100 + AT_rich Low_complexity Low_complexity 1 32 0 8587 248 45 49 chr10 21318710 21321137 -118995628 + L1MB7 LINE L1 2 2439 -4233 1792 159 10 13 chr10 21321137 21321445 -118995320 + AluSx SINE Alu 1 307 -5 8587 248 45 49 chr10 21321445 21323791 -118992974 + L1MB7 LINE L1 2439 4844 -1828 1480 218 70 24 chr10 21323791 21324162 -118992603 + MLT1B LTR MaLR 1 388 -2 8587 248 45 49 chr10 21324162 21325429 -118991336 + L1MB7 LINE L1 4844 6116 -556 2388 172 39 20 chr10 21325434 21325928 -118990837 + L1MB7 LINE L1 6164 6666 -16 2558 138 14 21 chr10 21328541 21328977 -118987788 - Tigger2a DNA MER2_type -1 433 1 521 278 117 24 chr10 21329508 21329713 -118987052 - MIR SINE MIR -27 235 12 186 189 0 0 chr10 21330596 21330633 -118986132 + T-rich Low_complexity Low_complexity 1 37 0 228 235 0 44 chr10 21332348 21332416 -118984349 + A-rich Low_complexity Low_complexity 1 65 0 414 0 0 0 chr10 21332459 21332505 -118984260 + (TG)n Simple_repeat Simple_repeat 2 47 0 335 23 23 0 chr10 21333263 21333307 -118983458 + (CA)n Simple_repeat Simple_repeat 2 46 0 475 304 176 3 chr10 21333785 21334097 -118982668 + L1ME3A LINE L1 4156 4521 -1625 390 285 82 55 chr10 21334105 21334526 -118982239 + L1ME3A LINE L1 4566 5011 -1135 2070 167 17 0 chr10 21334526 21334886 -118981879 + MER47A DNA MER2_type 1 366 0 390 285 82 55 chr10 21334886 21335082 -118981683 + L1ME3A LINE L1 5011 5200 -946 1434 190 38 19 chr10 21335137 21335400 -118981365 - AluJb SINE Alu -44 268 1 352 192 39 128 chr10 21335447 21335650 -118981115 + L1ME3A LINE L1 5318 5502 -662 803 180 38 27 chr10 21335650 21335833 -118980932 + MLT1A2 LTR MaLR 1 185 -189 351 184 0 0 chr10 21335833 21335920 -118980845 + CT-rich Low_complexity Low_complexity 1 87 0 698 231 22 11 chr10 21335950 21336132 -118980633 + MLT1A2 LTR MaLR 191 374 0 261 0 0 0 chr10 21336318 21336347 -118980418 + (TA)n Simple_repeat Simple_repeat 1 29 0 313 261 108 58 chr10 21336376 21336617 -118980148 + L1ME3A LINE L1 5656 5908 -262 2982 198 33 58 chr10 21338841 21339664 -118977101 - L1MB7 LINE L1 -57 6625 5842 4403 182 14 13 chr10 21339664 21340456 -118976309 - MER54B LTR ERVL 0 793 1 2982 198 33 58 chr10 21340456 21340763 -118976002 - L1MB7 LINE L1 -840 5842 5529 1052 218 40 30 chr10 21340762 21341166 -118975599 - L1MB7 LINE L1 -4896 1646 1239 * 22 35 0 0 chr10 21341517 21341546 -118975219 + AT_rich Low_complexity Low_complexity 1 29 0 2289 113 0 0 chr10 21342515 21342816 -118973949 + AluSx SINE Alu 1 301 -11 1209 209 27 62 chr10 21343314 21343522 -118973243 - MLT1A2 LTR MaLR -11 363 172 2153 128 7 0 chr10 21343522 21343826 -118972939 - AluSx SINE Alu -6 306 1 1209 209 27 62 chr10 21343826 21343990 -118972775 - MLT1A2 LTR MaLR -202 172 4 27 29 0 0 chr10 21344261 21344295 -118972470 + AT_rich Low_complexity Low_complexity 1 34 0 1593 213 10 7 chr10 21344297 21344598 -118972167 - AluJb SINE Alu -10 302 1 1802 179 47 28 chr10 21344628 21345177 -118971588 + MLT2A1 LTR ERVL 1 554 0 201 254 0 0 chr10 21345938 21345997 -118970768 + (TA)n Simple_repeat Simple_repeat 1 59 0 278 26 26 0 chr10 21345999 21346038 -118970727 + (GA)n Simple_repeat Simple_repeat 1 40 0 548 175 24 63 chr10 21347957 21348118 -118968647 - FLAM_A SINE Alu 0 133 1 1007 279 55 80 chr10 21348336 21349640 -118967125 - L1MEc LINE L1 -4310 2812 1541 279 79 0 0 chr10 21349645 21349683 -118967082 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 803 201 0 20 chr10 21349687 21349836 -118966929 - FRAM SINE Alu -30 146 1 838 288 53 12 chr10 21349837 21350177 -118966588 - L1MEc LINE L1 -5091 1332 979 1721 184 33 50 chr10 21350545 21350942 -118965823 + MLT1B LTR MaLR 1 390 0 4375 66 12 0 chr10 21351235 21352131 -118964634 + L1P3 LINE L1 4756 5657 -497 229 255 0 0 chr10 21352548 21352599 -118964166 - MIR SINE MIR -28 234 184 763 148 30 108 chr10 21352621 21352688 -118964077 - MER3 DNA MER1_type -13 196 125 5551 115 19 7 chr10 21352688 21353707 -118963058 - L1PA13 LINE L1 -5 6158 5131 763 148 30 108 chr10 21353707 21353842 -118962923 - MER3 DNA MER1_type -84 125 10 2489 81 0 3 chr10 21353894 21354204 -118962561 + AluY SINE Alu 1 309 -2 2036 130 0 19 chr10 21354641 21354957 -118961808 + AluSx SINE Alu 1 310 -2 183 269 167 28 chr10 21355356 21355464 -118961301 + L2 LINE L2 3190 3312 -1 771 180 37 0 chr10 21355824 21355985 -118960780 - L1MA9 LINE L1 -364 5948 5782 271 132 52 58 chr10 21355990 21356164 -118960601 + (TA)n Simple_repeat Simple_repeat 1 173 0 2371 165 3 18 chr10 21356205 21356677 -118960088 - L1MA9 LINE L1 -543 5769 5304 2179 64 0 4 chr10 21356768 21357034 -118959731 - AluY SINE Alu -19 292 28 201 147 0 0 chr10 21357071 21357105 -118959660 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 1985 102 39 14 chr10 21357245 21357530 -118959235 + AluSc SINE Alu 1 292 -17 1700 154 34 27 chr10 21357560 21357678 -118959087 + AluJo SINE Alu 10 126 -186 216 0 0 0 chr10 21357678 21357702 -118959063 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1700 154 34 27 chr10 21357702 21357875 -118958890 + AluJo SINE Alu 126 303 -9 206 214 0 0 chr10 21357962 21358004 -118958761 + GA-rich Low_complexity Low_complexity 1 42 0 188 273 78 78 chr10 21358299 21358427 -118958338 - L3b LINE CR1 -336 1247 1120 420 206 87 60 chr10 21361082 21361300 -118955465 - L1M4 LINE L1 -1357 4789 4566 2387 107 7 0 chr10 21361395 21361705 -118955060 - AluSx SINE Alu 0 312 1 414 336 46 23 chr10 21362645 21362862 -118953903 + L2 LINE L2 2545 2766 -548 225 0 0 0 chr10 21363000 21363025 -118953740 + (T)n Simple_repeat Simple_repeat 1 25 0 1266 130 4 15 chr10 21363357 21363596 -118953169 + AluY SINE Alu 1 301 -10 277 274 75 9 chr10 21364345 21364451 -118952314 + MLT1K LTR MaLR 1 113 -475 370 218 0 163 chr10 21364786 21364933 -118951832 + L2 LINE L2 3182 3304 -9 3110 129 35 0 chr10 21365273 21365785 -118950980 - L1PA13 LINE L1 0 6163 5634 189 208 21 42 chr10 21366059 21366107 -118950658 + L2 LINE L2 3261 3307 -6 380 255 52 46 chr10 21366692 21366845 -118949920 + MIR SINE MIR 12 165 -97 303 71 0 0 chr10 21368159 21368201 -118948564 + (GA)n Simple_repeat Simple_repeat 2 43 0 338 333 94 66 chr10 21368585 21368903 -118947862 - L2 LINE L2 0 3272 2946 241 171 0 0 chr10 21369033 21369074 -118947691 - Alu SINE Alu -260 43 3 1835 165 0 16 chr10 21369737 21370040 -118946725 + AluJo SINE Alu 3 300 -12 233 296 0 0 chr10 21370734 21370788 -118945977 + L2 LINE L2 3252 3305 -8 225 0 0 0 chr10 21371231 21371256 -118945509 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 393 22 0 0 chr10 21371255 21371301 -118945464 + (TG)n Simple_repeat Simple_repeat 2 47 0 1319 154 158 12 chr10 21371832 21372107 -118944658 - AluJo SINE Alu 0 312 2 2068 142 0 0 chr10 21372749 21373051 -118943714 + AluSq SINE Alu 1 302 -11 1459 99 54 18 chr10 21373100 21373321 -118943444 - MER30 DNA MER1_type -1 229 1 356 317 69 7 chr10 21373337 21373482 -118943283 + MIR SINE MIR 25 178 -84 252 281 118 37 chr10 21374179 21374314 -118942451 - MIR3 SINE MIR -5 203 58 21 36 0 0 chr10 21374338 21374366 -118942399 + AT_rich Low_complexity Low_complexity 1 28 0 310 313 62 39 chr10 21375248 21375427 -118941338 - L1ME4a LINE L1 -1 6120 5938 624 258 66 1 chr10 21375436 21375628 -118941137 + MIR SINE MIR 61 262 0 989 207 0 11 chr10 21375839 21376027 -118940738 + AluJb SINE Alu 1 186 -126 21 0 0 0 chr10 21376836 21376857 -118939908 + AT_rich Low_complexity Low_complexity 1 21 0 2736 154 29 10 chr10 21377406 21377924 -118938841 + L1MA4A LINE L1 5774 6301 -2 189 0 0 0 chr10 21378416 21378437 -118938328 + (TTTTTA)n Simple_repeat Simple_repeat 2 22 0 1653 155 54 30 chr10 21378442 21378739 -118938026 - AluJo SINE Alu -8 304 1 188 302 0 0 chr10 21378967 21379020 -118937745 + MIR SINE MIR 94 146 -62 2108 202 29 27 chr10 21379362 21379847 -118936918 - MER66B LTR ERV1 0 486 1 2016 122 48 14 chr10 21380637 21380989 -118935776 - THE1B LTR MaLR 0 364 1 547 256 119 0 chr10 21381312 21381480 -118935285 + MER5A DNA MER1_type 1 188 -1 398 341 83 18 chr10 21381544 21381773 -118934992 - MIR SINE MIR -4 258 15 616 128 0 0 chr10 21381883 21381969 -118934796 + AluJ/FLAM SINE Alu 1 86 -226 21 36 0 0 chr10 21381976 21382004 -118934761 + AT_rich Low_complexity Low_complexity 1 28 0 2082 147 33 14 chr10 21383245 21383613 -118933152 + THE1C LTR MaLR 1 375 0 2070 144 0 7 chr10 21385386 21385692 -118931073 - AluSx SINE Alu -7 305 2 322 195 184 0 chr10 21385861 21385948 -118930817 + MER5A DNA MER1_type 10 112 -77 1883 132 3 66 chr10 21385968 21386301 -118930464 + AluJb SINE Alu 1 312 0 738 189 0 0 chr10 21387235 21387401 -118929364 - FLAM_C SINE Alu 0 166 1 908 185 49 0 chr10 21388221 21388405 -118928360 + MER20 DNA MER1_type 1 193 -26 21 0 0 0 chr10 21388788 21388809 -118927956 + AT_rich Low_complexity Low_complexity 1 21 0 350 231 135 19 chr10 21388884 21388988 -118927777 + L2 LINE L2 3190 3305 -8 180 0 0 0 chr10 21389072 21389092 -118927673 + (TTG)n Simple_repeat Simple_repeat 2 21 0 333 330 9 9 chr10 21389224 21389330 -118927435 + MIR SINE MIR 36 141 -67 1342 171 4 0 chr10 21389339 21389573 -118927192 - MER46A DNA MER2_type 0 236 2 2220 112 0 31 chr10 21389649 21389970 -118926795 + AluY SINE Alu 1 311 0 486 46 0 0 chr10 21390201 21390266 -118926499 + (CA)n Simple_repeat Simple_repeat 2 66 0 424 297 126 16 chr10 21390850 21391032 -118925733 - MIR SINE MIR 0 262 61 321 339 55 0 chr10 21392141 21392268 -118924497 + L2 LINE L2 3138 3271 -1 1909 181 79 10 chr10 21392665 21392865 -118923900 - MSTB1 LTR MaLR 0 432 247 315 49 0 0 chr10 21392865 21392906 -118923859 + (GA)n Simple_repeat Simple_repeat 1 41 0 1909 181 79 10 chr10 21392906 21393090 -118923675 - MSTB1 LTR MaLR -185 247 16 240 43 43 21 chr10 21393090 21393137 -118923628 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 1909 181 79 10 chr10 21393137 21393155 -118923610 - MSTB1 LTR MaLR -416 16 1 181 319 0 0 chr10 21393482 21393529 -118923236 - L3b LINE CR1 -9 1574 1528 2033 140 7 0 chr10 21393582 21393875 -118922890 - AluSx SINE Alu -17 295 1 307 211 28 162 chr10 21394425 21394567 -118922198 + L2 LINE L2 3143 3265 -7 2259 103 0 31 chr10 21394858 21395179 -118921586 - AluSx SINE Alu 0 312 2 23 33 0 0 chr10 21395968 21395998 -118920767 + AT_rich Low_complexity Low_complexity 1 30 0 256 288 41 0 chr10 21396227 21396300 -118920465 - L2 LINE L2 -1 3312 3237 1347 191 61 22 chr10 21397871 21398149 -118918616 - AluJo SINE Alu -23 289 1 23 33 0 0 chr10 21398361 21398391 -118918374 + AT_rich Low_complexity Low_complexity 1 30 0 181 324 73 29 chr10 21398511 21398579 -118918186 - L2 LINE L2 -18 3295 3225 1255 192 71 47 chr10 21400043 21400407 -118916358 - MLT1D LTR MaLR -42 463 91 3272 193 13 44 chr10 21400430 21400910 -118915855 - LTR39 LTR ERV1 0 783 336 2058 140 10 0 chr10 21400910 21401210 -118915555 - AluSq SINE Alu -10 303 1 3272 193 13 44 chr10 21401210 21401518 -118915247 - LTR39 LTR ERV1 -447 336 20 234 234 47 0 chr10 21401507 21401571 -118915194 - MLT1D LTR MaLR -192 313 247 * 23 0 0 0 chr10 21401919 21401942 -118914823 + AT_rich Low_complexity Low_complexity 1 23 0 1328 145 4 4 chr10 21401962 21402189 -118914576 - L1PA15 LINE L1 -7 6158 5932 1680 153 0 81 chr10 21402966 21403299 -118913466 + AluJb SINE Alu 7 312 0 230 160 20 0 chr10 21403300 21403350 -118913415 + GA-rich Low_complexity Low_complexity 3 53 0 235 289 67 19 chr10 21403362 21403466 -118913299 + MIR SINE MIR 106 214 -48 33 85 0 0 chr10 21403466 21403548 -118913217 + AT_rich Low_complexity Low_complexity 1 82 0 21 36 0 0 chr10 21403617 21403645 -118913120 + AT_rich Low_complexity Low_complexity 1 28 0 215 211 0 19 chr10 21404256 21404272 -118912493 + (CTA)n Simple_repeat Simple_repeat 1 16 -35 2301 114 0 0 chr10 21404272 21404571 -118912194 - AluSx SINE Alu -13 299 1 215 211 0 19 chr10 21404571 21404606 -118912159 + (CTA)n Simple_repeat Simple_repeat 16 51 0 469 297 110 38 chr10 21404678 21404887 -118911878 - MIR SINE MIR -13 249 26 2008 84 18 25 chr10 21405468 21405754 -118911011 + AluSq SINE Alu 26 309 -4 429 303 21 28 chr10 21405760 21405902 -118910863 + L2 LINE L2 3172 3312 -1 857 189 0 51 chr10 21407329 21407504 -118909261 - FRAM SINE Alu 0 166 1 198 340 134 43 chr10 21408602 21408811 -118907954 - L2 LINE L2 -219 3053 2826 198 402 0 0 chr10 21408875 21408962 -118907803 + L3 LINE CR1 1469 1555 -22 1386 99 0 11 chr10 21410364 21410545 -118906220 + AluSg/x SINE Alu 125 303 -7 189 0 0 0 chr10 21410545 21410566 -118906199 + (GA)n Simple_repeat Simple_repeat 2 22 0 244 189 27 0 chr10 21411113 21411187 -118905578 + GA-rich Low_complexity Low_complexity 1 76 0 518 301 142 28 chr10 21411292 21411687 -118905078 + MLT1J LTR MaLR 23 462 -49 776 203 7 20 chr10 21412126 21412274 -118904491 - FRAM SINE Alu -19 157 12 199 255 0 0 chr10 21413228 21413275 -118903490 + L2 LINE L2 3216 3262 -10 188 300 0 0 chr10 21413401 21413441 -118903324 - MIR SINE MIR -18 244 205 1643 173 14 38 chr10 21414179 21414526 -118902239 - MER44D DNA MER2_type 0 609 1 2159 137 0 0 chr10 21415036 21415336 -118901429 - AluSx SINE Alu -12 300 1 183 323 32 43 chr10 21416362 21416455 -118900310 - MIR SINE MIR -142 120 29 395 328 101 21 chr10 21416514 21416752 -118900013 + L3 LINE CR1 764 1020 -557 180 77 0 0 chr10 21416968 21416994 -118899771 + (TTTTTG)n Simple_repeat Simple_repeat 2 27 0 2562 50 0 19 chr10 21417036 21417353 -118899412 - AluY SINE Alu 0 311 1 376 209 45 68 chr10 21417956 21417976 -118898789 - Charlie1b DNA MER1_type -2259 502 483 1849 135 26 32 chr10 21417976 21418288 -118898477 - AluJb SINE Alu -2 310 1 376 209 45 68 chr10 21418288 21418444 -118898321 - Charlie1b DNA MER1_type -2278 483 330 10312 28 2 0 chr10 21418448 21420442 -118896323 - L1PA3 LINE L1 0 6155 4155 3438 30 2 0 chr10 21420442 21420870 -118895895 + L1PA3 LINE L1 3715 4143 -2003 1055 237 73 19 chr10 21420870 21421187 -118895578 - Charlie1b DNA MER1_type -188 335 2 2291 119 0 3 chr10 21421330 21421641 -118895124 + AluSx SINE Alu 1 310 -2 29 0 0 0 chr10 21423295 21423324 -118893441 + AT_rich Low_complexity Low_complexity 1 29 0 422 266 111 29 chr10 21423917 21424124 -118892641 - MIR SINE MIR -19 243 20 25 0 0 0 chr10 21424308 21424333 -118892432 + AT_rich Low_complexity Low_complexity 1 25 0 1593 150 0 7 chr10 21424333 21424606 -118892159 - L1PA16 LINE L1 -3 6163 5893 1046 76 0 0 chr10 21424635 21424767 -118891998 - AluY SINE Alu -179 132 1 261 0 0 0 chr10 21424769 21424798 -118891967 + (T)n Simple_repeat Simple_repeat 1 29 0 23 0 0 0 chr10 21424849 21424872 -118891893 + AT_rich Low_complexity Low_complexity 1 23 0 760 244 77 27 chr10 21426283 21426504 -118890261 - MIR SINE MIR -28 234 3 200 57 0 29 chr10 21428321 21428356 -118888409 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 24 53 0 0 chr10 21428615 21428653 -118888112 + AT_rich Low_complexity Low_complexity 1 38 0 235 98 0 0 chr10 21428735 21428776 -118887989 - L1PA7 LINE L1 -3 6151 6111 * 3631 62 10 0 chr10 21428769 21429255 -118887510 + L1PA7 LINE L1 5389 5879 -275 832 212 24 91 chr10 21429437 21429777 -118886988 - MER33 DNA MER1_type -7 317 1 954 154 6 30 chr10 21429866 21430035 -118886730 + FRAM SINE Alu 1 165 -11 202 276 121 20 chr10 21430421 21430614 -118886151 + MIR SINE MIR 8 260 -2 649 317 55 39 chr10 21430847 21431159 -118885606 + L2 LINE L2 2961 3277 -36 2382 85 3 19 chr10 21431320 21431637 -118885128 - AluSp SINE Alu -1 312 1 300 314 12 0 chr10 21431796 21431882 -118884883 - MIR SINE MIR -67 141 55 24 32 0 0 chr10 21431949 21431980 -118884785 + AT_rich Low_complexity Low_complexity 1 31 0 26 64 0 0 chr10 21432138 21432185 -118884580 + AT_rich Low_complexity Low_complexity 1 47 0 613 146 0 0 chr10 21432282 21432385 -118884380 - L1PA16 LINE L1 0 6166 6064 11858 175 12 7 chr10 21434700 21435067 -118881698 - L1PB1 LINE L1 0 6867 6503 329 0 0 24 chr10 21435067 21435109 -118881656 + (TG)n Simple_repeat Simple_repeat 2 42 0 198 103 0 0 chr10 21435113 21435142 -118881623 + (TA)n Simple_repeat Simple_repeat 2 30 0 11858 175 12 7 chr10 21435142 21436504 -118880261 - L1PB1 LINE L1 -366 6501 5148 216 0 0 0 chr10 21436504 21436528 -118880237 + (TTTTA)n Simple_repeat Simple_repeat 4 27 0 11858 175 12 7 chr10 21436528 21438432 -118878333 - L1PB1 LINE L1 -1719 5148 3208 1007 123 17 102 chr10 21438442 21438678 -118878087 - L1PB1 LINE L1 -6014 849 634 1113 152 10 0 chr10 21438678 21438876 -118877889 - L1PB1 LINE L1 -6663 200 1 677 240 45 54 chr10 21440007 21440249 -118876516 - L2 LINE L2 -1 3312 3073 218 189 0 19 chr10 21440262 21440297 -118876468 + (TG)n Simple_repeat Simple_repeat 2 37 -16 2405 215 35 13 chr10 21440297 21440842 -118875923 - MER74A LTR ERVL 0 558 2 218 189 0 19 chr10 21440842 21440859 -118875906 + (TG)n Simple_repeat Simple_repeat 37 53 0 207 298 0 18 chr10 21440862 21440919 -118875846 - L2 LINE L2 -239 3074 3019 245 271 24 0 chr10 21441793 21441878 -118874887 - Charlie2 DNA MER1_type 0 2862 2776 239 284 112 9 chr10 21441945 21442061 -118874704 + L2 LINE L2 2481 2608 -706 418 266 26 53 chr10 21442231 21442573 -118874192 - Charlie2 DNA MER1_type -300 2562 2230 287 238 36 0 chr10 21442619 21442703 -118874062 - Charlie2 DNA MER1_type -2471 311 225 231 143 0 0 chr10 21443899 21443934 -118872831 - MIR SINE MIR -21 241 207 243 0 0 0 chr10 21444261 21444288 -118872477 + (TA)n Simple_repeat Simple_repeat 1 27 0 454 257 33 20 chr10 21444400 21444552 -118872213 - MIR SINE MIR 0 262 109 207 0 0 0 chr10 21444684 21444707 -118872058 + (T)n Simple_repeat Simple_repeat 1 23 0 2046 142 3 3 chr10 21444821 21445131 -118871634 + AluSg SINE Alu 1 310 0 436 275 104 28 chr10 21445659 21445841 -118870924 - MIR3 SINE MIR -3 205 10 1059 169 135 82 chr10 21447214 21447569 -118869196 + THE1C LTR MaLR 1 374 -1 198 156 0 0 chr10 21448008 21448053 -118868712 + (CA)n Simple_repeat Simple_repeat 2 46 0 293 222 0 22 chr10 21448117 21448207 -118868558 + GA-rich Low_complexity Low_complexity 3 90 0 258 314 32 51 chr10 21448747 21448903 -118867862 - MIR SINE MIR -47 215 63 1870 225 63 33 chr10 21448936 21449769 -118866996 - L1MDa LINE L1 -3700 2840 1984 468 306 11 6 chr10 21449782 21449962 -118866803 - L1MDa LINE L1 -6359 181 1 231 114 0 0 chr10 21449983 21450018 -118866747 + (GAA)n Simple_repeat Simple_repeat 2 36 0 1939 121 9 65 chr10 21450253 21450575 -118866190 - AluSx SINE Alu -8 304 1 217 286 231 39 chr10 21450665 21450847 -118865918 - MIR SINE MIR 0 262 46 217 305 99 33 chr10 21453955 21454106 -118862659 + L3 LINE CR1 1203 1363 -214 1341 137 85 102 chr10 21454361 21454763 -118862002 + LTR1 LTR ERV1 12 406 -379 411 202 0 12 chr10 21454763 21454847 -118861918 - 7SLRNA srpRNA srpRNA -236 84 2 704 211 0 0 chr10 21454851 21454984 -118861781 - FLAM_C SINE Alu 0 133 1 185 65 32 0 chr10 21455036 21455067 -118861698 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 1180 198 40 36 chr10 21455072 21455324 -118861441 - AluJo SINE Alu -30 282 30 307 264 33 74 chr10 21455840 21455961 -118860804 + MER91A DNA MER1_type 18 133 -63 2138 118 7 10 chr10 21455979 21456285 -118860480 - AluSx SINE Alu -7 305 1 184 29 29 29 chr10 21457414 21457448 -118859317 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 1467 174 34 4 chr10 21457917 21458182 -118858583 + AluJo SINE Alu 10 282 -30 185 333 0 0 chr10 21458878 21458935 -118857830 + MIR SINE MIR 91 147 -115 203 182 23 0 chr10 21461202 21461246 -118855519 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 2315 80 3 16 chr10 21461546 21461859 -118854906 + AluSc SINE Alu 1 309 0 231 229 14 14 chr10 21463194 21463228 -118853537 + GA-rich Low_complexity Low_complexity 3 36 -36 1967 141 3 7 chr10 21463228 21463534 -118853231 + AluSx SINE Alu 6 310 -2 231 229 14 14 chr10 21463534 21463569 -118853196 + GA-rich Low_complexity Low_complexity 35 72 0 252 0 0 0 chr10 21464496 21464524 -118852241 + (TG)n Simple_repeat Simple_repeat 2 29 0 202 358 11 0 chr10 21465633 21465728 -118851037 + MIR SINE MIR 46 141 -121 258 170 0 0 chr10 21465893 21465907 -118850858 + (CA)n Simple_repeat Simple_repeat 2 15 -39 2121 120 0 0 chr10 21465907 21466206 -118850559 + AluSg1 SINE Alu 11 309 0 258 170 0 0 chr10 21466206 21466244 -118850521 + (CA)n Simple_repeat Simple_repeat 14 54 0 716 158 23 12 chr10 21466314 21466485 -118850280 + GA-rich Low_complexity Low_complexity 1 173 0 484 227 87 70 chr10 21468622 21468864 -118847901 - L1ME3A LINE L1 0 6170 5925 1101 229 5 0 chr10 21468866 21469089 -118847676 - MER58A DNA MER1_type 0 224 1 625 227 7 32 chr10 21469131 21469285 -118847480 - MER63A DNA MER1_type -3 207 58 220 226 38 0 chr10 21469339 21469392 -118847373 + MIR SINE MIR 94 148 -114 357 24 0 0 chr10 21470085 21470127 -118846638 + (TA)n Simple_repeat Simple_repeat 2 43 0 1950 174 100 3 chr10 21470846 21471236 -118845529 - MSTA LTR MaLR 0 428 1 22 0 0 0 chr10 21472828 21472850 -118843915 + AT_rich Low_complexity Low_complexity 1 22 0 340 303 139 56 chr10 21474603 21474870 -118841895 + L3b LINE CR1 1202 1490 -93 2036 140 3 16 chr10 21475023 21475338 -118841427 + AluSx SINE Alu 1 311 -1 2045 154 35 35 chr10 21477012 21477211 -118839554 - MER57A LTR ERV1 0 403 205 2274 86 0 3 chr10 21477211 21477525 -118839240 + AluSq SINE Alu 1 313 0 2045 154 35 35 chr10 21477525 21477728 -118839037 - MER57A LTR ERV1 -197 206 1 467 182 6 116 chr10 21478951 21479120 -118837645 + MLT1D LTR MaLR 18 166 -339 1788 147 23 14 chr10 21479120 21479555 -118837210 - MER1A DNA MER1_type 0 533 1 987 211 92 57 chr10 21479555 21479882 -118836883 + MLT1D LTR MaLR 160 498 -7 343 322 50 8 chr10 21479894 21480015 -118836750 + MIR SINE MIR 8 133 -129 284 155 0 17 chr10 21480207 21480265 -118836500 + CT-rich Low_complexity Low_complexity 2 58 0 216 97 0 0 chr10 21480917 21480948 -118835817 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 220 336 40 27 chr10 21481159 21481308 -118835457 + MIR SINE MIR 28 178 -84 2063 111 62 0 chr10 21481405 21481693 -118835072 + AluSc SINE Alu 1 306 -3 5722 177 30 25 chr10 21482524 21484699 -118832066 + L1PA16 LINE L1 3956 6157 -9 21 36 0 0 chr10 21484699 21484727 -118832038 + AT_rich Low_complexity Low_complexity 1 28 0 200 206 0 0 chr10 21484752 21484786 -118831979 + polypyrimidine Low_complexity Low_complexity 3 36 0 22 0 0 0 chr10 21485427 21485449 -118831316 + AT_rich Low_complexity Low_complexity 1 22 0 1475 99 0 5 chr10 21485470 21485662 -118831103 - AluSx SINE Alu -75 237 47 203 314 172 6 chr10 21485766 21485935 -118830830 - L2 LINE L2 -627 2687 2491 24 32 0 0 chr10 21487136 21487167 -118829598 + AT_rich Low_complexity Low_complexity 1 31 0 379 88 0 0 chr10 21487622 21487679 -118829086 - AluJo SINE Alu 0 302 246 984 186 5 42 chr10 21487682 21487875 -118828890 - AluJo SINE Alu -126 186 1 290 305 55 23 chr10 21488091 21488219 -118828546 + MIR SINE MIR 117 248 -14 2154 114 10 0 chr10 21488340 21488630 -118828135 + AluSq SINE Alu 1 293 -20 648 197 87 6 chr10 21488849 21489032 -118827733 + Charlie5 DNA MER1_type 2388 2585 -27 243 325 0 48 chr10 21489202 21489285 -118827480 + L2 LINE L2 3192 3270 -43 476 274 97 37 chr10 21490039 21490360 -118826405 - L1MC4a LINE L1 -308 5813 5542 216 0 0 0 chr10 21491358 21491382 -118825383 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 203 321 36 0 chr10 21491654 21491710 -118825055 - MIR SINE MIR -64 144 87 1324 216 7 28 chr10 21492618 21492905 -118823860 + AluJo SINE Alu 1 281 -31 189 0 0 0 chr10 21492930 21492951 -118823814 + (TAAAA)n Simple_repeat Simple_repeat 4 24 0 230 281 0 0 chr10 21493060 21493117 -118823648 + CT-rich Low_complexity Low_complexity 3 59 0 186 43 0 0 chr10 21494875 21494898 -118821867 + (T)n Simple_repeat Simple_repeat 1 23 0 801 116 0 0 chr10 21494927 21495048 -118821717 - AluY SINE Alu -6 305 185 2180 73 0 23 chr10 21495154 21495455 -118821310 + AluY SINE Alu 9 302 -9 811 21 0 0 chr10 21495826 21495920 -118820845 - L1PA4 LINE L1 -379 5776 5683 3051 43 3 0 chr10 21495920 21496291 -118820474 + L1PA4 LINE L1 5779 6153 -2 626 239 38 38 chr10 21496511 21496695 -118820070 + MER63A DNA MER1_type 1 184 -26 351 241 15 83 chr10 21497111 21497244 -118819521 + L2 LINE L2 3122 3245 -27 609 300 14 14 chr10 21497246 21497456 -118819309 + LTR16A LTR ERVL 211 420 -30 383 243 0 23 chr10 21498575 21498748 -118818017 + (TA)n Simple_repeat Simple_repeat 1 169 0 358 229 33 0 chr10 21498762 21498915 -118817850 + (TA)n Simple_repeat Simple_repeat 1 158 0 790 296 102 42 chr10 21500375 21500759 -118816006 + L3 LINE CR1 1143 1553 -24 1936 131 3 3 chr10 21500759 21501056 -118815709 - AluSx SINE Alu -15 297 1 790 296 102 42 chr10 21501056 21501073 -118815692 + L3 LINE CR1 1553 1568 -9 183 218 36 55 chr10 21504140 21504195 -118812570 - L2 LINE L2 0 3272 3219 2143 204 17 0 chr10 21504641 21505053 -118811712 + L1PA15 LINE L1 5746 6164 -1 435 174 0 0 chr10 21505666 21505752 -118811013 + (TA)n Simple_repeat Simple_repeat 1 86 0 241 119 0 0 chr10 21505757 21505799 -118810966 - LTR66 LTR ERVL -175 435 394 198 143 0 0 chr10 21505799 21505834 -118810931 + (TA)n Simple_repeat Simple_repeat 2 36 0 303 293 181 17 chr10 21507111 21507227 -118809538 + L2 LINE L2 3138 3272 0 503 226 51 69 chr10 21507480 21507616 -118809149 - HAL1 LINE L1 -109 2398 2265 2292 60 0 14 chr10 21507616 21507938 -118808827 + AluY SINE Alu 1 318 0 503 226 51 69 chr10 21507938 21508017 -118808748 - HAL1 LINE L1 -242 2265 2186 1944 259 78 56 chr10 21508080 21508209 -118808556 - HAL1 LINE L1 -707 1800 1675 1828 128 4 0 chr10 21508209 21508466 -118808299 + AluSx SINE Alu 45 302 -10 1944 259 78 56 chr10 21508466 21508646 -118808119 - HAL1 LINE L1 -832 1675 1501 2259 107 0 3 chr10 21508646 21508956 -118807809 - AluSg SINE Alu -1 309 1 1944 259 78 56 chr10 21508956 21509626 -118807139 - HAL1 LINE L1 -1006 1501 798 378 250 34 0 chr10 21509698 21509786 -118806979 + MER5A DNA MER1_type 9 99 -90 409 256 15 38 chr10 21509823 21509956 -118806809 - HAL1 LINE L1 -1839 668 539 1677 215 8 32 chr10 21510003 21510375 -118806390 - MLT1A2 LTR MaLR -11 363 1 315 167 106 15 chr10 21510383 21510449 -118806316 - HAL1 LINE L1 -2029 478 407 300 354 27 0 chr10 21510554 21510701 -118806064 - HAL1 LINE L1 -2355 152 2 186 274 118 0 chr10 21511699 21511750 -118805015 + L2 LINE L2 3242 3298 -15 1741 161 25 0 chr10 21511825 21512110 -118804655 - AluSx SINE Alu -15 297 6 854 198 16 21 chr10 21512819 21513006 -118803759 - MLT1A2 LTR MaLR 0 374 189 437 306 0 61 chr10 21513152 21513332 -118803433 - MLT1A2 LTR MaLR -205 169 1 249 53 79 0 chr10 21513785 21513823 -118802942 - MIR SINE MIR -67 141 101 278 279 10 29 chr10 21516162 21516266 -118800499 + MER5A DNA MER1_type 4 105 -84 194 266 0 24 chr10 21517167 21517295 -118799470 + MER5A DNA MER1_type 1 183 -6 214 135 0 0 chr10 21517467 21517504 -118799261 - L2 LINE L2 -1 3312 3276 625 291 43 19 chr10 21518185 21518443 -118798322 + L2 LINE L2 2664 2927 -387 222 37 0 0 chr10 21518527 21518554 -118798211 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 214 191 0 0 chr10 21518981 21519023 -118797742 + A-rich Low_complexity Low_complexity 1 42 0 2253 79 0 22 chr10 21519996 21520311 -118796454 - AluY SINE Alu -3 308 1 2163 114 0 32 chr10 21521224 21521540 -118795225 - AluSx SINE Alu -6 306 1 45 69 0 0 chr10 21522076 21522163 -118794602 + AT_rich Low_complexity Low_complexity 1 87 0 2126 128 0 0 chr10 21522192 21522488 -118794277 - AluSg SINE Alu -14 296 1 2322 92 3 0 chr10 21523405 21523700 -118793065 + AluSp SINE Alu 1 296 -17 237 313 43 39 chr10 21525385 21525517 -118791248 + MIR SINE MIR 7 153 -63 2042 120 3 3 chr10 21525853 21526160 -118790605 - AluSx SINE Alu 0 307 1 24 0 0 0 chr10 21526215 21526239 -118790526 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr10 21526694 21526717 -118790048 + (T)n Simple_repeat Simple_repeat 1 23 0 1547 171 6 84 chr10 21526753 21527087 -118789678 - AluJo SINE Alu -2 310 3 2182 97 3 3 chr10 21527185 21527483 -118789282 - AluSx SINE Alu -14 298 1 2850 191 27 16 chr10 21527595 21528151 -118788614 - MER68 LTR ERV1 0 562 1 214 377 84 31 chr10 21528153 21528344 -118788421 - L2 LINE L2 -111 3161 2961 861 134 22 8 chr10 21528599 21528733 -118788032 + AluJo SINE Alu 1 136 -176 1814 168 0 19 chr10 21528739 21529048 -118787717 + AluJo SINE Alu 1 303 -9 2234 106 48 31 chr10 21529100 21529458 -118787307 - THE1B LTR MaLR 0 364 1 218 323 55 31 chr10 21532314 21532441 -118784324 - MIR SINE MIR -98 164 35 183 42 0 0 chr10 21532711 21532735 -118784030 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 185 276 92 11 chr10 21532771 21532858 -118783907 + MIR3 SINE MIR 104 197 -11 2056 135 3 0 chr10 21534701 21534997 -118781768 - AluSq SINE Alu -14 299 3 372 281 18 26 chr10 21535301 21535415 -118781350 + MER81 DNA DNA 1 113 -1 1354 249 27 31 chr10 21535651 21535869 -118780896 - MER89 LTR ERV1 0 559 342 2118 114 4 0 chr10 21535869 21536171 -118780594 - AluSx SINE Alu 0 304 2 1354 249 27 31 chr10 21536171 21536413 -118780352 - MER89 LTR ERV1 -217 342 1 2460 144 41 5 chr10 21537897 21538308 -118778457 - MSTB LTR MaLR 0 426 1 1737 154 38 0 chr10 21538348 21538640 -118778125 + AluSx SINE Alu 1 303 -9 384 300 138 6 chr10 21540074 21540234 -118776531 - MER5A DNA MER1_type 0 189 9 2109 123 7 3 chr10 21540713 21541014 -118775751 + AluSx SINE Alu 1 302 -10 2169 147 40 8 chr10 21541107 21541460 -118775305 + THE1B LTR MaLR 1 364 0 1814 144 6 31 chr10 21544746 21545066 -118771699 - AluSx SINE Alu 0 312 1 270 116 0 0 chr10 21545609 21545652 -118771113 + (CCTA)n Simple_repeat Simple_repeat 4 46 0 24 32 0 0 chr10 21545739 21545770 -118770995 + AT_rich Low_complexity Low_complexity 1 31 0 1050 90 17 11 chr10 21546607 21546709 -118770056 + (TTCC)n Simple_repeat Simple_repeat 1 281 0 1050 90 17 11 chr10 21546709 21546887 -118769878 + (TTCC)n Simple_repeat Simple_repeat 1 179 0 258 206 0 0 chr10 21547778 21547846 -118768919 + (TG)n Simple_repeat Simple_repeat 1 68 0 198 150 0 0 chr10 21549515 21549555 -118767210 + (GA)n Simple_repeat Simple_repeat 1 40 0 277 269 59 24 chr10 21550339 21550489 -118766276 - Charlie8 DNA MER1_type -2132 285 136 731 154 0 31 chr10 21551437 21551567 -118765198 + FLAM_C SINE Alu 1 126 -7 1563 203 38 38 chr10 21551892 21552262 -118764503 + MLT1B LTR MaLR 1 370 -20 1272 172 60 34 chr10 21552455 21552723 -118764042 - AluJo SINE Alu -1 311 37 222 174 0 0 chr10 21552996 21553042 -118763723 + (TA)n Simple_repeat Simple_repeat 2 47 0 204 111 67 0 chr10 21553622 21553667 -118763098 + T-rich Low_complexity Low_complexity 2 49 0 1139 99 82 11 chr10 21553696 21553878 -118762887 - L1PA8 LINE L1 -2 6170 5976 2309 72 3 7 chr10 21554108 21554436 -118762329 - AluSg SINE Alu 0 310 1 306 275 166 46 chr10 21554653 21554937 -118761828 - L2 LINE L2 0 3313 2996 238 136 62 0 chr10 21555517 21555598 -118761167 + (TA)n Simple_repeat Simple_repeat 2 87 0 1834 156 117 14 chr10 21555802 21556161 -118760604 + MSTD LTR MaLR 1 396 0 198 71 0 0 chr10 21557000 21557028 -118759737 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 4832 136 40 36 chr10 21557038 21557708 -118759057 - L1PA16 LINE L1 -9 6157 5480 2143 113 14 0 chr10 21557708 21558001 -118758764 - AluSp SINE Alu -16 297 1 4832 136 40 36 chr10 21558001 21558230 -118758535 - L1PA16 LINE L1 -686 5480 5254 38 22 0 0 chr10 21558308 21558353 -118758412 + AT_rich Low_complexity Low_complexity 1 45 0 220 292 0 15 chr10 21558621 21558686 -118758079 + L2 LINE L2 3180 3243 -70 385 271 221 0 chr10 21558980 21559102 -118757663 + MER5B DNA MER1_type 28 176 -2 433 161 74 19 chr10 21559236 21559398 -118757367 + (TATAA)n Simple_repeat Simple_repeat 4 174 0 443 181 78 0 chr10 21559411 21559577 -118757188 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 1407 196 110 46 chr10 21559637 21560009 -118756756 + MSTD LTR MaLR 1 396 0 604 220 187 0 chr10 21560603 21560753 -118756012 - MER5B DNA MER1_type 0 178 1 30 0 0 0 chr10 21562017 21562047 -118754718 + AT_rich Low_complexity Low_complexity 1 30 0 520 268 49 41 chr10 21562694 21562890 -118753875 + MLT1H LTR MaLR 11 251 -298 1885 145 7 10 chr10 21562890 21563193 -118753572 - MER101 LTR ERV1 0 474 173 1550 176 112 0 chr10 21563695 21564007 -118752758 + MER7A DNA MER2_type 2 346 0 2082 134 3 0 chr10 21564418 21564717 -118752048 + AluSx SINE Alu 1 300 -12 1497 193 40 50 chr10 21565134 21565512 -118751253 + MLT1A2 LTR MaLR 1 374 0 1096 86 0 0 chr10 21566364 21566516 -118750249 - L1PA5 LINE L1 -1 6153 6002 2015 97 31 17 chr10 21566983 21567272 -118749493 + AluSg SINE Alu 18 310 0 232 241 165 13 chr10 21568735 21568814 -118747951 - HAL1b LINE L1 -15 1333 1243 2199 233 53 56 chr10 21568950 21569610 -118747155 + MER72 LTR ERV1 1 658 -64 399 56 19 0 chr10 21569735 21569789 -118746976 + MER72 LTR ERV1 668 722 0 330 306 20 20 chr10 21569965 21570112 -118746653 - HAL1b LINE L1 -538 810 664 1120 237 30 79 chr10 21570661 21571054 -118745711 - MLT1A2 LTR MaLR 0 374 1 207 0 0 0 chr10 21571593 21571616 -118745149 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 42 36 0 0 chr10 21572791 21572847 -118743918 + AT_rich Low_complexity Low_complexity 1 56 0 324 70 0 0 chr10 21573098 21573141 -118743624 + (TTCC)n Simple_repeat Simple_repeat 4 46 0 1210 77 0 16 chr10 21573151 21573333 -118743432 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1904 131 4 0 chr10 21573338 21573613 -118743152 - AluSx SINE Alu -36 276 1 386 315 76 20 chr10 21573630 21573827 -118742938 - MLT1K LTR MaLR -190 398 191 1842 135 4 0 chr10 21574208 21574468 -118742297 - AluSx SINE Alu -45 267 7 22 35 0 0 chr10 21576497 21576526 -118740239 + AT_rich Low_complexity Low_complexity 1 29 0 227 336 39 55 chr10 21576534 21576662 -118740103 + MIR SINE MIR 40 165 -97 492 298 36 18 chr10 21576704 21576872 -118739893 - MIR SINE MIR -48 214 44 765 226 62 16 chr10 21577693 21577936 -118738829 - L1MCc LINE L1 -6133 290 37 8046 162 12 34 chr10 21578138 21580399 -118736366 + L1PA14 LINE L1 3913 6154 -7 432 0 0 0 chr10 21580399 21580447 -118736318 + (TA)n Simple_repeat Simple_repeat 2 49 0 631 240 56 34 chr10 21580467 21580700 -118736065 - Charlie7 DNA MER1_type -1939 673 436 521 232 10 0 chr10 21580708 21580807 -118735958 - MER5A DNA MER1_type -80 109 10 928 187 42 0 chr10 21580815 21580981 -118735784 - MER58B DNA MER1_type 0 341 169 291 114 0 0 chr10 21581726 21581770 -118734995 + (A)n Simple_repeat Simple_repeat 1 44 0 192 239 88 80 chr10 21582805 21582918 -118733847 + MIR SINE MIR 108 221 -41 740 235 157 16 chr10 21583001 21583320 -118733445 - MER31A LTR ERV1 -18 467 104 457 231 12 0 chr10 21583400 21583537 -118733228 + (TGGA)n Simple_repeat Simple_repeat 1 135 -366 2853 24 0 0 chr10 21583537 21583868 -118732897 + L1PA4 LINE L1 5823 6153 -2 457 231 12 0 chr10 21583868 21583895 -118732870 + (TGGA)n Simple_repeat Simple_repeat 135 501 0 228 304 188 9 chr10 21584992 21585104 -118731661 + MIR SINE MIR 6 137 -125 21 0 0 0 chr10 21586995 21587016 -118729749 + AT_rich Low_complexity Low_complexity 1 21 0 946 112 20 0 chr10 21587143 21587295 -118729470 - L1MA4A LINE L1 -4 6299 6145 767 302 34 11 chr10 21587301 21587536 -118729229 + MIR SINE MIR 1 230 -32 326 230 296 0 chr10 21587999 21588134 -118728631 + MER5A DNA MER1_type 9 183 -6 1786 141 41 3 chr10 21589034 21589325 -118727440 - AluJo SINE Alu -10 302 1 198 0 0 0 chr10 21589492 21589514 -118727251 + (A)n Simple_repeat Simple_repeat 1 22 0 192 374 12 24 chr10 21589893 21589976 -118726789 + MIR SINE MIR 11 92 -170 2494 245 23 15 chr10 21590002 21590667 -118726098 - L1MC4a LINE L1 -1 7807 7138 322 269 162 107 chr10 21591024 21591147 -118725618 - MIR SINE MIR -12 250 108 2156 104 0 10 chr10 21591147 21591463 -118725302 + AluSc SINE Alu 1 309 0 322 269 162 107 chr10 21591463 21591555 -118725210 - MIR SINE MIR -154 108 23 24 67 0 0 chr10 21591872 21591917 -118724848 + AT_rich Low_complexity Low_complexity 1 45 0 2244 83 0 0 chr10 21593219 21593497 -118723268 - AluY SINE Alu -7 304 27 184 324 20 74 chr10 21593658 21593806 -118722959 + L2 LINE L2 2375 2514 -800 631 303 29 61 chr10 21593824 21593872 -118722893 + LTR16C LTR ERVL 224 272 -219 190 56 56 0 chr10 21593872 21593908 -118722857 + T-rich Low_complexity Low_complexity 3 40 0 631 303 29 61 chr10 21593908 21594136 -118722629 + LTR16C LTR ERVL 272 491 0 246 350 89 32 chr10 21594174 21594420 -118722345 - L2 LINE L2 -337 2977 2718 3402 134 31 8 chr10 21594435 21594949 -118721816 - MER1A DNA MER1_type 0 529 4 377 21 0 0 chr10 21595993 21596040 -118720725 + MADE1 DNA Mariner 1 47 -33 28 0 0 0 chr10 21596136 21596164 -118720601 + AT_rich Low_complexity Low_complexity 1 28 0 2217 96 3 7 chr10 21596407 21596708 -118720057 + AluSq SINE Alu 1 300 -13 301 136 30 0 chr10 21597607 21597673 -118719092 + (TA)n Simple_repeat Simple_repeat 1 68 0 22 0 0 0 chr10 21597788 21597810 -118718955 + AT_rich Low_complexity Low_complexity 1 22 0 1575 165 38 10 chr10 21598387 21598678 -118718087 + AluJo SINE Alu 4 302 -10 1092 172 6 0 chr10 21598684 21598864 -118717901 + FRAM SINE Alu 1 176 0 2548 93 34 8 chr10 21600347 21600702 -118716063 + THE1B LTR MaLR 1 364 0 1757 130 6 71 chr10 21601069 21601392 -118715373 + AluSp SINE Alu 2 303 -10 1115 39 22 28 chr10 21601395 21601576 -118715189 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1913 163 0 7 chr10 21604193 21604493 -118712272 - AluJo SINE Alu -14 298 1 569 298 87 14 chr10 21605314 21605532 -118711233 + MIR SINE MIR 16 249 -13 246 139 0 0 chr10 21606813 21606856 -118709909 - L1MB3 LINE L1 -3 6180 6138 235 143 18 18 chr10 21606906 21606962 -118709803 + CT-rich Low_complexity Low_complexity 2 57 0 1187 198 0 22 chr10 21607178 21607405 -118709360 + AluJo SINE Alu 79 300 -12 28 71 0 0 chr10 21608027 21608083 -118708682 + AT_rich Low_complexity Low_complexity 1 56 0 5970 66 88 0 chr10 21608137 21608968 -118707797 + L1PA8 LINE L1 5269 6172 0 316 234 81 32 chr10 21608972 21609096 -118707669 + L1ME LINE L1 5204 5333 -813 481 276 35 7 chr10 21609109 21609254 -118707511 + L1MCa LINE L1 140 288 -6276 1846 171 42 35 chr10 21609255 21609783 -118706982 - MLT2A2 LTR ERVL 0 554 18 1208 263 75 25 chr10 21609787 21610225 -118706540 + L1MCa LINE L1 106 565 -5480 563 205 141 46 chr10 21610386 21610649 -118706116 + L1MCa LINE L1 1289 1576 -4988 1234 164 19 157 chr10 21610698 21610763 -118706002 + L1MC3 LINE L1 7413 7485 -300 2113 110 3 28 chr10 21610763 21611080 -118705685 + AluSc SINE Alu 1 309 0 1234 164 19 157 chr10 21611080 21611447 -118705318 + L1MC3 LINE L1 7485 7785 0 371 295 24 43 chr10 21611439 21611646 -118705119 + L1ME LINE L1 5346 5548 -2260 * 312 164 25 118 chr10 21611756 21611884 -118704881 + L1ME LINE L1 5720 5844 -277 236 51 0 51 chr10 21611938 21611977 -118704788 + (TATG)n Simple_repeat Simple_repeat 4 40 0 2515 47 0 7 chr10 21612198 21612499 -118704266 + AluY SINE Alu 1 299 -12 1641 175 14 7 chr10 21615182 21615328 -118701437 - AluJo SINE Alu -30 282 132 254 29 29 0 chr10 21615328 21615363 -118701402 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 1641 175 14 7 chr10 21615363 21615496 -118701269 - AluJo SINE Alu -180 132 1 506 316 138 0 chr10 21617641 21617859 -118698906 + MIR SINE MIR 15 262 0 414 0 0 0 chr10 21618174 21618220 -118698545 + (TG)n Simple_repeat Simple_repeat 2 47 0 230 332 102 34 chr10 21618289 21618524 -118698241 - L2 LINE L2 -217 3055 2805 230 222 0 0 chr10 21621419 21621464 -118695301 + L2 LINE L2 3262 3306 -7 1519 255 75 27 chr10 21621610 21622092 -118694673 + MLT1D LTR MaLR 1 505 0 1538 205 7 3 chr10 21622694 21622977 -118693788 - AluSx SINE Alu -28 284 1 214 174 43 0 chr10 21623342 21623388 -118693377 - MIR SINE MIR -139 123 76 192 152 0 0 chr10 21623700 21623733 -118693032 + CT-rich Low_complexity Low_complexity 5 37 0 181 107 0 0 chr10 21623897 21623925 -118692840 - L2 LINE L2 -1 3271 3244 875 175 88 58 chr10 21624002 21624310 -118692455 - MER33 DNA MER1_type -7 317 1 279 358 30 0 chr10 21624712 21624846 -118691919 - L2 LINE L2 -563 2751 2614 526 188 78 13 chr10 21624890 21625044 -118691721 + MER103 DNA DNA 3 166 0 212 338 15 15 chr10 21625350 21625486 -118691279 + GA-rich Low_complexity Low_complexity 5 140 0 22 0 0 0 chr10 21626831 21626853 -118689912 + AT_rich Low_complexity Low_complexity 1 22 0 191 150 50 20 chr10 21626888 21626988 -118689777 + (TTATA)n Simple_repeat Simple_repeat 3 105 0 1497 212 85 21 chr10 21627095 21627347 -118689418 - MLT1D LTR MaLR -17 488 195 366 80 0 0 chr10 21627347 21627397 -118689368 + (TG)n Simple_repeat Simple_repeat 2 51 0 1497 212 85 21 chr10 21627397 21627578 -118689187 - MLT1D LTR MaLR -310 195 27 28 29 0 0 chr10 21628078 21628113 -118688652 + AT_rich Low_complexity Low_complexity 1 35 0 364 241 54 0 chr10 21628188 21628300 -118688465 - L1ME4a LINE L1 -32 6089 5972 22 0 0 0 chr10 21629886 21629908 -118686857 + AT_rich Low_complexity Low_complexity 1 22 0 2033 119 3 20 chr10 21630800 21631103 -118685662 - AluSx SINE Alu -12 300 3 1611 295 71 12 chr10 21631529 21632118 -118684647 - L2 LINE L2 -767 2547 1924 611 201 103 58 chr10 21632118 21632342 -118684423 - ORSL DNA AcHobo 0 275 42 383 263 55 89 chr10 21632358 21632594 -118684171 - L2 LINE L2 -1384 1930 1703 198 0 0 0 chr10 21632596 21632618 -118684147 + (GA)n Simple_repeat Simple_repeat 1 22 0 2348 90 6 3 chr10 21632636 21632947 -118683818 - AluSx SINE Alu 0 312 1 513 338 26 22 chr10 21632989 21633220 -118683545 - L2 LINE L2 -1823 1491 1260 21 0 0 0 chr10 21633281 21633302 -118683463 + AT_rich Low_complexity Low_complexity 1 21 0 2236 104 3 0 chr10 21633775 21634073 -118682692 + AluSc SINE Alu 1 299 -10 192 317 109 0 chr10 21634803 21634904 -118681861 + MIR SINE MIR 36 147 -115 254 351 8 30 chr10 21635607 21635741 -118681024 + L2 LINE L2 2889 3019 -253 351 59 0 88 chr10 21636013 21636115 -118680650 + (TA)n Simple_repeat Simple_repeat 2 94 0 207 371 62 10 chr10 21636252 21636349 -118680416 + L2 LINE L2 3121 3222 -50 24 0 0 0 chr10 21636923 21636947 -118679818 + AT_rich Low_complexity Low_complexity 1 24 0 278 250 131 0 chr10 21637288 21637372 -118679393 - MER103 DNA DNA -10 156 62 229 341 87 16 chr10 21640069 21640195 -118676570 - L2 LINE L2 -10 3262 3128 1329 205 15 111 chr10 21640860 21641265 -118675500 + MLT1A2 LTR MaLR 9 374 0 264 303 87 46 chr10 21642413 21642631 -118674134 + L2 LINE L2 2479 2705 -609 1971 157 7 0 chr10 21642845 21643151 -118673614 + AluSx SINE Alu 1 308 -4 191 378 20 26 chr10 21643153 21643304 -118673461 + L2 LINE L2 2707 2856 -458 234 343 0 0 chr10 21643321 21643394 -118673371 + L2 LINE L2 3228 3300 -13 234 312 112 114 chr10 21643418 21643848 -118672917 - L2 LINE L2 -40 3232 2804 29 60 0 0 chr10 21644713 21644763 -118672002 + AT_rich Low_complexity Low_complexity 1 50 0 428 271 112 38 chr10 21645962 21646382 -118670383 + L1M4 LINE L1 4154 4604 -1542 203 256 0 0 chr10 21646397 21646440 -118670325 + (TG)n Simple_repeat Simple_repeat 2 44 0 268 261 0 0 chr10 21647038 21647103 -118669662 + (TA)n Simple_repeat Simple_repeat 1 65 0 327 25 0 0 chr10 21647107 21647147 -118669618 + (CA)n Simple_repeat Simple_repeat 2 41 0 364 333 92 31 chr10 21647720 21647915 -118668850 - MIR SINE MIR -10 252 46 2476 82 125 5 chr10 21648199 21648599 -118668166 - LTR7 LTR ERV1 -2 448 1 2323 98 50 13 chr10 21648599 21648977 -118667788 - HERVH LTR ERV1 0 7713 7322 1386 109 23 14 chr10 21648975 21649196 -118667569 - HERVH LTR ERV1 -1894 5819 5597 * 4404 138 1 1 chr10 21649193 21649854 -118666911 - HERVH LTR ERV1 -2564 5149 4489 3298 114 12 6 chr10 21649857 21650356 -118666409 - HERVH LTR ERV1 -3720 3993 3492 902 142 20 0 chr10 21650346 21650494 -118666271 - HERVH LTR ERV1 -4423 3290 3140 * 20103 93 11 28 chr10 21650488 21653526 -118663239 - HERVH LTR ERV1 -4726 2987 1 2424 92 125 5 chr10 21653528 21653928 -118662837 - LTR7 LTR ERV1 -2 448 1 246 336 52 0 chr10 21654745 21654861 -118661904 - MIR SINE MIR -68 194 73 35 24 0 0 chr10 21654927 21654969 -118661796 + AT_rich Low_complexity Low_complexity 1 42 0 183 217 12 24 chr10 21654974 21655057 -118661708 + (CATA)n Simple_repeat Simple_repeat 2 83 0 504 146 68 3 chr10 21655103 21655401 -118661364 + (TA)n Simple_repeat Simple_repeat 1 317 0 663 161 61 8 chr10 21655459 21655857 -118660908 + (TA)n Simple_repeat Simple_repeat 1 419 0 695 197 0 0 chr10 21656597 21656719 -118660046 + FLAM_A SINE Alu 4 125 -8 11850 218 50 38 chr10 21657238 21660290 -118656475 - L1MA9 LINE L1 0 7333 4573 2320 111 0 0 chr10 21660290 21660588 -118656177 - AluSq SINE Alu -15 298 1 11850 218 50 38 chr10 21660588 21663773 -118652992 - L1MA9 LINE L1 -2760 4573 1428 1325 206 43 20 chr10 21663773 21664075 -118652690 - L1MA9 LINE L1 -6726 365 2 460 237 72 29 chr10 21666143 21666282 -118650483 - MIR SINE MIR -46 216 72 3079 172 20 25 chr10 21666565 21667169 -118649596 + MER6A DNA MER2_type 2 602 -3 198 326 54 62 chr10 21667389 21667518 -118649247 + MIR SINE MIR 75 202 -60 2167 136 0 0 chr10 21667520 21667821 -118648944 + AluSx SINE Alu 1 301 -11 4081 55 0 0 chr10 21668395 21668906 -118647859 + L1PA7 LINE L1 5644 6154 0 2350 68 3 0 chr10 21668908 21669202 -118647563 + AluY SINE Alu 1 328 -63 207 161 0 0 chr10 21669202 21669233 -118647532 + (CAAA)n Simple_repeat Simple_repeat 4 34 0 2350 68 3 0 chr10 21669233 21669298 -118647467 + AluY SINE Alu 328 391 0 450 0 0 0 chr10 21669299 21669349 -118647416 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 183 184 0 0 chr10 21669798 21669836 -118646929 + (TAG)n Simple_repeat Simple_repeat 3 40 0 21 57 0 0 chr10 21669915 21669950 -118646815 + AT_rich Low_complexity Low_complexity 1 35 0 235 304 65 70 chr10 21672215 21672445 -118644320 + MIR SINE MIR 7 235 -27 906 129 0 80 chr10 21672525 21672726 -118644039 - AluSq SINE Alu -32 281 97 21 0 0 0 chr10 21673193 21673214 -118643551 + AT_rich Low_complexity Low_complexity 1 21 0 198 306 20 0 chr10 21673815 21673864 -118642901 - L3 LINE CR1 -106 1471 1422 552 292 0 0 chr10 21673976 21674106 -118642659 + MER94 DNA DNA 1 130 -4 182 289 105 13 chr10 21674675 21674751 -118642014 - L2 LINE L2 -49 3264 3182 444 324 14 0 chr10 21674945 21675087 -118641678 + MIR SINE MIR 109 252 -10 7741 57 10 2 chr10 21675941 21676973 -118639792 - L1P LINE L1 -3531 2615 1576 354 191 8 76 chr10 21677441 21677572 -118639193 - L1 LINE L1 -1174 4972 4851 3607 100 0 24 chr10 21677579 21678128 -118638637 + L1PB1 LINE L1 5615 6150 -1 644 66 33 0 chr10 21678401 21678492 -118638273 + THE1A LTR MaLR 3 96 -259 226 301 41 57 chr10 21678690 21678813 -118637952 - L1MC/D LINE L1 -2154 5654 5534 336 359 36 48 chr10 21678846 21679094 -118637671 - MIR SINE MIR 0 262 18 228 331 169 0 chr10 21679813 21679967 -118636798 + MIR SINE MIR 11 190 -72 34 42 0 0 chr10 21680024 21680072 -118636693 + AT_rich Low_complexity Low_complexity 1 48 0 184 337 116 0 chr10 21680209 21680295 -118636470 + MIR SINE MIR 40 135 -73 379 113 0 70 chr10 21682525 21682596 -118634169 + HERVH LTR ERV1 7648 7713 0 1651 98 107 87 chr10 21682596 21683035 -118633730 + LTR7 LTR ERV1 1 448 -2 371 333 92 31 chr10 21683319 21683514 -118633251 + MIR SINE MIR 46 252 -10 381 22 0 0 chr10 21684087 21684133 -118632632 + (TG)n Simple_repeat Simple_repeat 2 47 0 268 261 0 0 chr10 21684137 21684202 -118632563 + (TA)n Simple_repeat Simple_repeat 2 66 0 1840 148 0 63 chr10 21685113 21685431 -118631334 - AluJb SINE Alu -14 298 1 834 237 48 19 chr10 21686475 21686682 -118630083 + MER58A DNA MER1_type 10 222 -2 4882 134 20 27 chr10 21687294 21688260 -118628505 + L1MA5A LINE L1 5117 6080 -217 206 179 75 15 chr10 21688265 21688332 -118628433 + (TATAA)n Simple_repeat Simple_repeat 5 75 0 1182 106 26 5 chr10 21688361 21688550 -118628215 + L1MA5A LINE L1 6099 6291 -6 2255 82 0 13 chr10 21690416 21690721 -118626044 - AluY SINE Alu -8 303 3 180 324 73 0 chr10 21690891 21690959 -118625806 - MIR SINE MIR -60 148 76 336 149 45 0 chr10 21691166 21691233 -118625532 + T-rich Low_complexity Low_complexity 1 70 0 778 144 35 6 chr10 21691233 21691407 -118625358 + CT-rich Low_complexity Low_complexity 1 179 0 237 178 44 0 chr10 21693177 21693222 -118623543 - MIR SINE MIR -59 149 103 338 154 69 25 chr10 21693222 21693314 -118623451 + L1MA7 LINE L1 6020 6115 -197 915 185 28 5 chr10 21693339 21693550 -118623215 + L1MA7 LINE L1 6064 6279 -12 266 356 11 0 chr10 21693580 21693670 -118623095 - MIR SINE MIR -157 105 15 303 284 142 26 chr10 21694021 21694176 -118622589 - MER5A DNA MER1_type -16 173 1 336 24 0 0 chr10 21694237 21694278 -118622487 + (CA)n Simple_repeat Simple_repeat 2 42 0 1951 149 39 33 chr10 21695556 21695918 -118620847 - THE1B LTR MaLR 0 364 1 3890 178 61 92 chr10 21696121 21697427 -118619338 - MER11A LTR ERVK 0 1266 1 1560 137 26 26 chr10 21697506 21697777 -118618988 - MER44D DNA MER2_type -32 577 37 2971 124 4 61 chr10 21699753 21699907 -118616858 - L1PA13 LINE L1 -1 6162 6001 2409 89 0 0 chr10 21699907 21700220 -118616545 - AluSp SINE Alu 0 313 1 2971 124 4 61 chr10 21700220 21700607 -118616158 - L1PA13 LINE L1 -162 6001 5652 1388 187 41 29 chr10 21700611 21700926 -118615839 - L1MC1 LINE L1 -6 6327 6009 308 96 0 0 chr10 21700929 21700981 -118615784 - L1PB1 LINE L1 -1 6150 6099 364 136 17 0 chr10 21700981 21701040 -118615725 - L1PA13 LINE L1 -498 5663 5604 * 735 160 3 1 chr10 21701036 21701176 -118615589 + L1PA13 LINE L1 5497 5637 -514 187 298 35 35 chr10 21702038 21702095 -118614670 + L2 LINE L2 3203 3259 -13 341 332 26 4 chr10 21702121 21702256 -118614509 - MIR SINE MIR -62 146 17 339 279 60 69 chr10 21703267 21703575 -118613190 - L1M4 LINE L1 -5188 1446 996 482 259 80 12 chr10 21704285 21704447 -118612318 - MIR SINE MIR -1 261 89 186 150 0 0 chr10 21704601 21704641 -118612124 + (CATAT)n Simple_repeat Simple_repeat 3 42 0 2217 98 3 0 chr10 21704964 21705260 -118611505 + AluSx SINE Alu 1 297 -15 27 29 0 0 chr10 21706633 21706667 -118610098 + AT_rich Low_complexity Low_complexity 1 34 0 1114 145 0 0 chr10 21706668 21706827 -118609938 - AluSg/x SINE Alu -25 287 129 853 156 0 0 chr10 21707697 21707838 -118608927 - FRAM SINE Alu -15 161 21 904 174 72 62 chr10 21709242 21709474 -118607291 + AluJb SINE Alu 86 319 0 250 295 95 9 chr10 21709945 21710050 -118606715 - MER91C DNA MER1_type 0 140 27 994 329 99 24 chr10 21710068 21710920 -118605845 + L2 LINE L2 2419 3313 0 190 370 0 0 chr10 21711365 21711419 -118605346 - L3 LINE CR1 -124 1453 1400 1075 118 0 13 chr10 21711620 21711772 -118604993 + FRAM SINE Alu 2 151 -25 577 246 106 10 chr10 21711878 21712085 -118604680 - MLT1H LTR MaLR 0 549 323 27 0 0 0 chr10 21712092 21712119 -118604646 + AT_rich Low_complexity Low_complexity 1 27 0 1938 133 34 0 chr10 21712526 21712820 -118603945 + AluSp SINE Alu 1 304 -9 270 0 0 0 chr10 21712820 21712850 -118603915 + (GA)n Simple_repeat Simple_repeat 1 30 0 * 832 73 24 0 chr10 21712848 21712972 -118603793 + (GGAA)n Simple_repeat Simple_repeat 2 128 0 1702 108 88 57 chr10 21713558 21713854 -118602911 + AluSx SINE Alu 1 305 -7 201 74 0 0 chr10 21714176 21714203 -118602562 + (TATTG)n Simple_repeat Simple_repeat 3 29 0 1768 180 0 22 chr10 21715582 21715899 -118600866 - AluJb SINE Alu -2 310 1 2558 38 0 3 chr10 21716055 21716369 -118600396 - L1PA2 LINE L1 -2 6153 5841 224 336 103 20 chr10 21719027 21719173 -118597592 - L3b LINE CR1 -166 1417 1260 28 0 0 0 chr10 21719414 21719442 -118597323 + AT_rich Low_complexity Low_complexity 1 28 0 261 319 106 16 chr10 21720304 21720921 -118595844 - L1ME4a LINE L1 -6 6115 5425 794 101 0 106 chr10 21721336 21721563 -118595202 - L1PA8 LINE L1 -77 6095 5893 1106 290 36 28 chr10 21721564 21721954 -118594811 - L2 LINE L2 -797 2517 2125 47 33 0 0 chr10 21722938 21722999 -118593766 + AT_rich Low_complexity Low_complexity 1 61 0 2559 73 0 0 chr10 21723440 21723783 -118592982 + L1PA8 LINE L1 5830 6172 0 21 36 0 0 chr10 21724783 21724811 -118591954 + AT_rich Low_complexity Low_complexity 1 28 0 3534 131 4 4 chr10 21725013 21725572 -118591193 - L1PA13 LINE L1 0 6163 5605 1095 136 24 15 chr10 21725951 21726157 -118590608 - L1MA5 LINE L1 -2 6298 6091 26 64 0 0 chr10 21726721 21726768 -118589997 + AT_rich Low_complexity Low_complexity 1 47 0 1188 162 24 0 chr10 21726790 21727000 -118589765 - L1MA5 LINE L1 -222 6078 5864 321 303 59 34 chr10 21727034 21727153 -118589612 - MER5A DNA MER1_type -45 144 23 246 226 0 0 chr10 21728070 21728132 -118588633 - L1MC4 LINE L1 -1328 6714 6653 234 191 0 0 chr10 21728139 21728186 -118588579 + (TA)n Simple_repeat Simple_repeat 2 48 0 1173 15 0 0 chr10 21729066 21729199 -118587566 + L1PA5 LINE L1 6007 6139 -15 192 40 0 0 chr10 21729199 21729224 -118587541 + (TA)n Simple_repeat Simple_repeat 1 25 0 345 54 0 5 chr10 21730201 21730259 -118586506 - L1PA4 LINE L1 -145 5986 5937 1451 18 0 0 chr10 21730259 21730424 -118586341 + L1PA4 LINE L1 5987 6155 0 407 298 18 89 chr10 21730524 21730749 -118586016 - MIR SINE MIR -1 261 53 349 178 14 27 chr10 21731801 21731874 -118584891 + MER58B DNA MER1_type 262 333 -8 351 0 0 0 chr10 21732795 21732834 -118583931 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr10 21733231 21733252 -118583513 + AT_rich Low_complexity Low_complexity 1 21 0 1383 12 0 6 chr10 21733252 21733415 -118583350 - L1PA5 LINE L1 -12 6142 5981 271 276 107 86 chr10 21735036 21735279 -118581486 - MIR SINE MIR -3 259 12 194 0 39 0 chr10 21735956 21735982 -118580783 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 2078 101 0 7 chr10 21735984 21736260 -118580505 - AluSc SINE Alu -35 274 1 969 127 0 0 chr10 21736260 21736402 -118580363 - AluSg/x SINE Alu -9 303 162 353 21 0 0 chr10 21737062 21737110 -118579655 - L1MA3 LINE L1 0 6305 6258 442 271 31 0 chr10 21737504 21737633 -118579132 - L1M4 LINE L1 -2022 4124 3992 235 288 133 26 chr10 21737784 21738086 -118578679 + L1M4 LINE L1 3884 4217 -1929 2077 126 3 0 chr10 21739430 21739724 -118577041 - AluSx SINE Alu -16 296 2 738 258 30 0 chr10 21739862 21740060 -118576705 + MER3 DNA MER1_type 5 208 -1 301 226 0 0 chr10 21740018 21740080 -118576685 - MER3 DNA MER1_type -119 90 29 * 43 0 0 0 chr10 21740080 21740123 -118576642 + AT_rich Low_complexity Low_complexity 1 43 0 23 78 0 0 chr10 21740199 21740250 -118576515 + AT_rich Low_complexity Low_complexity 1 51 0 570 144 0 0 chr10 21741063 21741153 -118575612 + AluJ/FLAM SINE Alu 1 90 -222 1022 161 10 10 chr10 21741153 21741345 -118575420 + L1PB4 LINE L1 5965 6156 0 505 87 0 0 chr10 21741352 21741421 -118575344 - MER39B LTR ERV1 -584 69 1 183 80 0 0 chr10 21741460 21741485 -118575280 + (A)n Simple_repeat Simple_repeat 1 25 0 826 93 60 7 chr10 21741724 21741874 -118574891 - L1MA4A LINE L1 0 6303 6146 1603 45 0 0 chr10 21743841 21744039 -118572726 + L1PA5 LINE L1 5954 6151 -3 196 367 22 0 chr10 21744094 21744184 -118572581 - L3 LINE CR1 -78 1499 1408 794 286 33 4 chr10 21744399 21744640 -118572125 - MIR SINE MIR -5 257 10 852 172 0 28 chr10 21744642 21744787 -118571978 + AluJo SINE Alu 7 147 -165 1591 179 28 10 chr10 21744787 21745077 -118571688 + AluJo SINE Alu 5 299 -13 1054 168 79 5 chr10 21745487 21745627 -118571138 - L1MA9 LINE L1 -4 6308 6145 228 35 0 0 chr10 21745627 21745656 -118571109 + (TG)n Simple_repeat Simple_repeat 2 30 0 1054 168 79 5 chr10 21745656 21745729 -118571036 - L1MA9 LINE L1 -167 6145 6079 42 57 0 0 chr10 21746647 21746717 -118570048 + AT_rich Low_complexity Low_complexity 1 70 0 1215 184 125 29 chr10 21746725 21746997 -118569768 + AluJo SINE Alu 4 301 -11 367 245 39 29 chr10 21747605 21747707 -118569058 - L2 LINE L2 -18 3295 3193 313 324 48 9 chr10 21748510 21748615 -118568150 + L2 LINE L2 3166 3274 -39 416 223 11 21 chr10 21748680 21748774 -118567991 + MER81 DNA DNA 22 114 0 259 369 8 16 chr10 21749044 21749166 -118567599 - MIR SINE MIR -65 143 23 467 254 60 40 chr10 21750152 21750353 -118566412 - L2 LINE L2 -1 3312 3108 423 378 66 33 chr10 21750508 21751129 -118565636 - L2 LINE L2 0 3313 2657 198 71 0 0 chr10 21751129 21751157 -118565608 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 423 378 66 33 chr10 21751157 21751295 -118565470 - L2 LINE L2 -656 2657 2525 270 0 0 0 chr10 21751307 21751337 -118565428 + (TG)n Simple_repeat Simple_repeat 1 30 0 748 259 57 30 chr10 21751347 21751648 -118565117 - L1ME2 LINE L1 -9 6138 5830 2474 205 43 41 chr10 21751811 21752372 -118564393 - MER77 LTR ERV1 -43 562 1 206 61 0 30 chr10 21752403 21752436 -118564329 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 263 302 22 58 chr10 21753117 21753256 -118563509 - MIR SINE MIR -21 241 108 401 297 94 42 chr10 21754140 21754715 -118562050 - L1ME2 LINE L1 -914 5215 4611 290 309 67 24 chr10 21754788 21754998 -118561767 - L1ME2 LINE L1 -3283 2846 2628 430 295 50 50 chr10 21755027 21755444 -118561321 - L1ME2 LINE L1 -4969 1150 734 472 424 118 18 chr10 21756044 21757155 -118559610 - L2 LINE L2 -955 2359 1138 189 94 0 0 chr10 21757176 21757208 -118559557 + (A)n Simple_repeat Simple_repeat 1 32 0 252 0 0 0 chr10 21758674 21758702 -118558063 + (T)n Simple_repeat Simple_repeat 1 28 0 200 145 14 43 chr10 21761539 21761608 -118555157 + CT-rich Low_complexity Low_complexity 2 68 0 365 292 25 17 chr10 21761731 21761851 -118554914 - L2 LINE L2 0 3313 3193 2415 92 0 3 chr10 21761916 21762220 -118554545 - AluSq SINE Alu -10 303 1 300 282 26 8 chr10 21763026 21763143 -118553622 - L1MA9 LINE L1 -38 6274 6156 818 156 0 15 chr10 21763784 21763919 -118552846 + FLAM_A SINE Alu 1 133 0 217 225 12 12 chr10 21764053 21764133 -118552632 + GA-rich Low_complexity Low_complexity 2 81 0 680 300 81 9 chr10 21764143 21764366 -118552399 - MIR SINE MIR -17 245 7 2248 91 3 3 chr10 21764390 21764686 -118552079 - AluSx SINE Alu -12 300 5 2240 120 3 0 chr10 21765051 21765352 -118551413 - AluSx SINE Alu -10 302 1 21 0 0 0 chr10 21765905 21765926 -118550839 + AT_rich Low_complexity Low_complexity 1 21 0 191 211 0 0 chr10 21766739 21766777 -118549988 - MER5B DNA MER1_type -2 176 139 340 330 19 0 chr10 21766820 21766923 -118549842 + MER5B DNA MER1_type 51 155 -23 308 321 0 47 chr10 21767013 21767119 -118549646 - MER5A DNA MER1_type -85 104 4 758 89 0 0 chr10 21767387 21767488 -118549277 - MER30 DNA MER1_type -129 101 1 313 182 26 39 chr10 21767551 21767628 -118549137 + MER116 DNA Mariner 5 80 0 304 368 68 76 chr10 21768215 21768625 -118548140 - L2 LINE L2 -1 3271 2865 629 345 79 32 chr10 21768699 21769356 -118547409 - L2 LINE L2 -478 2836 2149 933 107 0 8 chr10 21769362 21769493 -118547272 + AluJb SINE Alu 6 135 -177 180 0 0 0 chr10 21770118 21770138 -118546627 + (A)n Simple_repeat Simple_repeat 1 20 0 681 269 18 41 chr10 21770516 21770930 -118545835 + L1ME2 LINE L1 2065 2429 -3786 1771 150 0 72 chr10 21770989 21771323 -118545442 + AluJb SINE Alu 2 311 -1 407 258 56 66 chr10 21771452 21771598 -118545167 + L1ME2 LINE L1 2755 2900 -3315 932 155 37 5 chr10 21771598 21771785 -118544980 + L1MA9 LINE L1 6120 6312 0 407 258 56 66 chr10 21771785 21771836 -118544929 + L1ME2 LINE L1 2900 2950 -3265 206 179 0 15 chr10 21771836 21771903 -118544862 + (TA)n Simple_repeat Simple_repeat 1 66 0 548 224 23 91 chr10 21771907 21772291 -118544474 + L1ME2 LINE L1 2958 3315 -2900 2368 218 67 36 chr10 21772302 21772334 -118544431 + L1ME2 LINE L1 5196 5226 -1007 1529 165 49 14 chr10 21772334 21772619 -118544146 + AluJo SINE Alu 1 295 -17 2368 218 67 36 chr10 21772619 21772983 -118543782 + L1ME2 LINE L1 5226 5577 -656 252 59 0 0 chr10 21772983 21773017 -118543748 + (CA)n Simple_repeat Simple_repeat 1 34 0 2368 218 67 36 chr10 21773017 21773489 -118543276 + L1ME2 LINE L1 5577 6221 -12 937 160 0 6 chr10 21773844 21774000 -118542765 + AluJo SINE Alu 1 155 -157 740 270 15 27 chr10 21774033 21774292 -118542473 - MIR SINE MIR -5 257 2 1742 164 0 32 chr10 21774416 21774727 -118542038 - AluJo SINE Alu -11 301 1 213 121 0 0 chr10 21775256 21775289 -118541476 + (T)n Simple_repeat Simple_repeat 1 33 0 341 301 53 15 chr10 21776113 21776246 -118540519 - MIR SINE MIR -2 260 123 33 56 0 14 chr10 21776797 21776828 -118539937 + AT_rich Low_complexity Low_complexity 1 31 -40 2095 114 0 10 chr10 21776828 21777117 -118539648 + AluSx SINE Alu 1 286 -26 33 56 0 14 chr10 21777117 21777157 -118539608 + AT_rich Low_complexity Low_complexity 31 71 0 529 174 0 31 chr10 21777364 21777462 -118539303 - AluJb SINE Alu -8 304 210 279 122 0 0 chr10 21778810 21778859 -118537906 + (TA)n Simple_repeat Simple_repeat 2 50 0 253 213 13 53 chr10 21778863 21778938 -118537827 + CT-rich Low_complexity Low_complexity 1 72 0 1967 137 0 30 chr10 21779033 21779332 -118537433 + AluSx SINE Alu 1 290 -22 340 255 0 43 chr10 21779335 21779429 -118537336 - L1MC4 LINE L1 -1339 6703 6614 338 310 10 0 chr10 21779343 21779443 -118537322 + L1MC4 LINE L1 6614 6714 -1328 * 1968 131 58 17 chr10 21779994 21780354 -118536411 - THE1C LTR MaLR 0 375 1 3222 127 21 10 chr10 21780599 21781113 -118535652 - L1PA15 LINE L1 -7 6158 5639 180 0 0 0 chr10 21781380 21781400 -118535365 + (A)n Simple_repeat Simple_repeat 1 20 0 1832 168 30 0 chr10 21782174 21782472 -118534293 + AluJo SINE Alu 3 309 -3 357 62 0 0 chr10 21782591 21782639 -118534126 + (TGGA)n Simple_repeat Simple_repeat 1 48 0 226 306 14 0 chr10 21782642 21782714 -118534051 + GA-rich Low_complexity Low_complexity 4 76 0 646 253 6 12 chr10 21783013 21783179 -118533586 - MIR SINE MIR -1 261 97 2071 103 3 7 chr10 21783389 21783680 -118533085 - AluSx SINE Alu -22 290 1 609 304 25 0 chr10 21783834 21783995 -118532770 + MIR SINE MIR 13 177 -85 2222 110 0 22 chr10 21784445 21784763 -118532002 + AluSx SINE Alu 1 311 -1 2214 107 7 0 chr10 21785502 21785800 -118530965 + AluSq SINE Alu 1 300 -13 1933 153 13 0 chr10 21787017 21787318 -118529447 - AluSx SINE Alu -7 305 1 1487 195 3 58 chr10 21787847 21788155 -118528610 + AluJb SINE Alu 6 296 -16 470 284 0 31 chr10 21789001 21789128 -118527637 - MIR3 SINE MIR -4 204 82 251 303 25 33 chr10 21789596 21789718 -118527047 - L1ME4a LINE L1 -46 6075 5955 2221 180 102 7 chr10 21789978 21790439 -118526326 - MLT1D LTR MaLR 0 505 1 299 294 0 0 chr10 21790468 21790553 -118526212 - MER104 DNA Tc2 -77 103 19 2277 110 0 13 chr10 21790651 21790960 -118525805 + AluSx SINE Alu 1 305 -7 694 300 101 0 chr10 21791081 21791318 -118525447 - MIR SINE MIR 0 262 2 185 339 54 31 chr10 21792730 21792860 -118523905 - L2 LINE L2 -1698 1616 1484 995 213 80 3 chr10 21792864 21793165 -118523600 + MER33 DNA MER1_type 1 324 0 429 241 88 58 chr10 21793310 21793447 -118523318 - L2 LINE L2 0 3313 3173 29 28 0 0 chr10 21793685 21793721 -118523044 + AT_rich Low_complexity Low_complexity 1 36 0 2051 134 0 0 chr10 21793751 21794068 -118522697 + AluSx SINE Alu 1 317 0 435 119 0 0 chr10 21795820 21795887 -118520878 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 2126 141 0 0 chr10 21796772 21797084 -118519681 - AluSx SINE Alu 0 312 1 27 29 0 0 chr10 21797216 21797250 -118519515 + AT_rich Low_complexity Low_complexity 1 34 0 457 349 60 13 chr10 21797717 21797949 -118518816 + L3 LINE CR1 1290 1532 -45 251 53 0 0 chr10 21798488 21798526 -118518239 - L1MA3 LINE L1 0 6305 6268 2134 123 0 3 chr10 21798658 21798966 -118517799 - AluSg SINE Alu 0 310 4 2514 61 0 3 chr10 21799394 21799705 -118517060 + AluY SINE Alu 1 310 -1 21 36 0 0 chr10 21800078 21800106 -118516659 + AT_rich Low_complexity Low_complexity 1 28 0 4515 205 20 18 chr10 21800738 21802063 -118514702 - L1MA9 LINE L1 -36 6276 4948 2175 99 3 0 chr10 21802241 21802525 -118514240 + AluSp SINE Alu 2 286 -27 2966 174 105 79 chr10 21802605 21803701 -118513064 + L1PA12 LINE L1 1 1801 -5780 5708 101 21 8 chr10 21803702 21805136 -118511629 + L1PA14 LINE L1 4672 6152 -9 22 35 0 0 chr10 21805283 21805312 -118511453 + AT_rich Low_complexity Low_complexity 1 29 0 365 330 93 31 chr10 21805449 21805901 -118510864 + HAL1b LINE L1 128 607 -741 319 348 80 0 chr10 21806592 21806730 -118510035 + MLT1J2 LTR MaLR 255 403 -47 22 35 0 0 chr10 21807126 21807155 -118509610 + AT_rich Low_complexity Low_complexity 1 29 0 221 225 247 22 chr10 21807461 21807550 -118509215 + L2 LINE L2 3202 3310 -3 202 342 18 36 chr10 21807954 21808065 -118508700 - MIR3 SINE MIR -40 168 60 194 0 0 37 chr10 21808423 21808450 -118508315 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 562 242 15 0 chr10 21809787 21809919 -118506846 - MER94 DNA DNA 0 134 1 2014 132 0 0 chr10 21810400 21810680 -118506085 + AluSx SINE Alu 1 280 -32 273 29 0 0 chr10 21810682 21810716 -118506049 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 217 333 29 54 chr10 21811096 21811201 -118505564 - L2 LINE L2 -788 2526 2427 1959 114 82 0 chr10 21811201 21811481 -118505284 - AluSq SINE Alu -10 303 1 217 333 29 54 chr10 21811481 21811579 -118505186 - L2 LINE L2 -887 2427 2328 372 59 0 0 chr10 21811786 21811837 -118504928 + (CA)n Simple_repeat Simple_repeat 2 52 0 27 29 0 0 chr10 21813066 21813100 -118503665 + AT_rich Low_complexity Low_complexity 1 34 0 2352 231 9 6 chr10 21813281 21813805 -118502960 + MER97b DNA MER1_type? 40 565 -488 562 233 28 75 chr10 21813875 21814128 -118502637 + MER97c DNA MER1_type? 850 1090 0 218 175 0 18 chr10 21814192 21814249 -118502516 + (TA)n Simple_repeat Simple_repeat 2 57 0 1580 180 24 21 chr10 21814401 21814519 -118502246 + AluJb SINE Alu 1 117 -195 195 42 0 0 chr10 21814519 21814543 -118502222 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 1580 180 24 21 chr10 21814543 21814713 -118502052 + AluJb SINE Alu 117 290 -22 322 171 13 13 chr10 21814716 21814792 -118501973 + GA-rich Low_complexity Low_complexity 1 76 0 343 211 168 12 chr10 21815493 21815654 -118501111 - MER53 DNA DNA -3 186 1 400 244 181 31 chr10 21815929 21816089 -118500676 + MER5A DNA MER1_type 4 187 -2 2155 118 0 0 chr10 21816297 21816585 -118500180 + AluSx SINE Alu 1 288 -24 24 0 0 0 chr10 21816588 21816612 -118500153 + AT_rich Low_complexity Low_complexity 1 24 0 2164 93 4 0 chr10 21817620 21817900 -118498865 + AluSg SINE Alu 24 304 -6 270 276 0 0 chr10 21818168 21818226 -118498539 - MIR SINE MIR -64 144 87 2414 106 26 13 chr10 21818422 21818810 -118497955 - L1MA2 LINE L1 -209 6095 5703 25 0 0 0 chr10 21820014 21820039 -118496726 + AT_rich Low_complexity Low_complexity 1 25 0 186 71 0 0 chr10 21820558 21820586 -118496179 + (CAAA)n Simple_repeat Simple_repeat 4 31 0 29 28 0 0 chr10 21821571 21821607 -118495158 + AT_rich Low_complexity Low_complexity 1 36 0 963 55 78 0 chr10 21823261 21823389 -118493376 - MER85 DNA T2_type 0 139 2 942 189 61 0 chr10 21823559 21823755 -118493010 - MER3 DNA MER1_type -1 208 1 245 305 0 68 chr10 21823908 21824026 -118492739 + MIR SINE MIR 81 190 -72 21 0 0 0 chr10 21824554 21824575 -118492190 + AT_rich Low_complexity Low_complexity 1 21 0 255 291 13 0 chr10 21824972 21825051 -118491714 + (CATATA)n Simple_repeat Simple_repeat 2 81 0 297 0 0 0 chr10 21825073 21825106 -118491659 + (TG)n Simple_repeat Simple_repeat 2 34 0 992 184 0 0 chr10 21825108 21825271 -118491494 + FRAM SINE Alu 1 163 -3 376 247 0 0 chr10 21825276 21825357 -118491408 - MIR3 SINE MIR -41 167 87 259 212 15 45 chr10 21825976 21826042 -118490723 - L2 LINE L2 -15 3298 3235 1710 92 4 0 chr10 21827336 21827563 -118489202 - AluSp SINE Alu -85 228 1 182 250 19 135 chr10 21830896 21831000 -118485765 - L2 LINE L2 -1 3312 3221 218 176 0 39 chr10 21831011 21831062 -118485703 + T-rich Low_complexity Low_complexity 2 50 0 1500 180 55 21 chr10 21831067 21831356 -118485409 - AluJb SINE Alu -13 299 1 264 277 20 40 chr10 21831474 21831575 -118485190 - L2 LINE L2 -188 3084 2986 42458 53 1 4 chr10 21832135 21838296 -118478469 - L1PA4 LINE L1 -8 6147 3 424 329 140 28 chr10 21838328 21839048 -118477717 - L2 LINE L2 -896 2418 1618 319 315 98 94 chr10 21839351 21839627 -118477138 + L2 LINE L2 2996 3272 0 891 248 102 98 chr10 21840135 21840635 -118476130 + MLT1L LTR MaLR 19 520 -95 10881 72 5 13 chr10 21840760 21842181 -118474584 - L1P LINE L1 -4736 1410 1 831 124 0 0 chr10 21842189 21842302 -118474463 - AluSp/q SINE Alu -15 298 186 2922 56 56 11 chr10 21844250 21844627 -118472138 - L1PA10 LINE L1 -4 6164 5771 2174 137 0 0 chr10 21844996 21845295 -118471470 + AluSx SINE Alu 1 299 -13 332 308 69 0 chr10 21845302 21845432 -118471333 + MIR SINE MIR 76 214 -48 23 0 0 0 chr10 21845764 21845787 -118470978 + AT_rich Low_complexity Low_complexity 1 23 0 2497 226 122 14 chr10 21846100 21846820 -118469945 - MER21B LTR ERV1 -52 811 14 1503 196 3 27 chr10 21847082 21847383 -118469382 + AluJb SINE Alu 3 296 -16 194 397 0 0 chr10 21847483 21847556 -118469209 - L2 LINE L2 0 3313 3241 642 301 78 0 chr10 21847581 21847800 -118468965 - MIR SINE MIR -26 236 1 627 270 218 31 chr10 21847830 21848323 -118468442 - L2 LINE L2 -78 3235 2624 3395 132 23 0 chr10 21848366 21848850 -118467915 + MER1A DNA MER1_type 33 527 -2 1852 213 40 9 chr10 21848852 21849280 -118467485 - MER74C LTR ERVL -2 458 18 424 202 29 0 chr10 21849322 21849426 -118467339 - L2 LINE L2 -742 2572 2466 387 231 31 136 chr10 21849594 21849888 -118466877 + L1ME4a LINE L1 5630 5892 -229 249 231 51 13 chr10 21849920 21849998 -118466767 - MIR SINE MIR -2 260 180 746 204 20 7 chr10 21850356 21850508 -118466257 - Tigger2 DNA MER2_type -1 2717 2564 * 1205 134 10 14 chr10 21850505 21850714 -118466051 - Tigger2 DNA MER2_type -2510 208 1 2024 121 10 7 chr10 21851276 21851573 -118465192 + AluSg SINE Alu 1 298 -12 715 227 102 32 chr10 21851723 21851939 -118464826 + MIR SINE MIR 32 262 0 1653 232 178 29 chr10 21851956 21852198 -118464567 - MLT1H LTR MaLR 0 549 344 2810 10 0 0 chr10 21852198 21852501 -118464264 - AluY SINE Alu -8 303 1 1653 232 178 29 chr10 21852501 21852736 -118464029 - MLT1H LTR MaLR -205 344 1 304 319 38 52 chr10 21852738 21852948 -118463817 - L2 LINE L2 -1036 2278 2072 222 344 122 43 chr10 21853669 21853948 -118462817 - L2 LINE L2 -2394 920 620 2214 141 133 13 chr10 21854009 21854406 -118462359 + MER65A LTR ERV1 1 445 0 869 183 0 0 chr10 21854472 21854603 -118462162 + FLAM_A SINE Alu 1 131 -2 261 312 37 9 chr10 21854681 21854790 -118461975 + L1ME LINE L1 5454 5565 -556 1987 154 128 21 chr10 21854946 21855329 -118461436 - MSTA LTR MaLR 0 428 5 5719 129 20 14 chr10 21855329 21856208 -118460557 - MSTA-int LTR MaLR -1 1579 695 1384 142 0 5 chr10 21856192 21856404 -118460361 - MSTA-int LTR MaLR -1367 213 3 * 1730 179 130 41 chr10 21856406 21856797 -118459968 - MSTA LTR MaLR 0 428 3 326 328 61 114 chr10 21857213 21857693 -118459072 - L2 LINE L2 -20 3252 2799 403 246 242 16 chr10 21857772 21858028 -118458737 + L2 LINE L2 3000 3313 0 830 285 73 7 chr10 21858428 21858702 -118458063 - LTR16C LTR ERVL -1 490 199 4449 194 51 6 chr10 21858741 21859565 -118457200 - MER21B LTR ERV1 -2 861 1 2610 207 18 2 chr10 21859810 21860265 -118456500 - MER70A LTR ERVL -10 462 1 1802 193 0 0 chr10 21860280 21860591 -118456174 - AluJb SINE Alu 0 312 2 1984 140 0 7 chr10 21861325 21861632 -118455133 + AluSx SINE Alu 1 305 -7 843 256 122 36 chr10 21861852 21862263 -118454502 + L2 LINE L2 2867 3312 -1 2676 206 19 71 chr10 21862321 21862967 -118453798 + LTR9 LTR ERV1 1 612 0 2153 169 0 55 chr10 21865176 21865595 -118451170 - MER57A LTR ERV1 -5 398 3 498 202 0 19 chr10 21865614 21865718 -118451047 - MER57A-int LTR ERV1 -29 7508 7407 684 218 113 56 chr10 21865718 21866002 -118450763 - LTR54 LTR ERV1 -210 300 1 2842 219 43 93 chr10 21866002 21866958 -118449807 - MER57A-int LTR ERV1 -490 7326 6419 322 154 0 0 chr10 21866959 21867011 -118449754 - MER57A-int LTR ERV1 -1346 6470 6419 * 2153 205 68 14 chr10 21866980 21867448 -118449317 - MER57A-int LTR ERV1 -1251 6286 5825 4833 191 63 77 chr10 21867751 21869310 -118447455 - MER57A-int LTR ERV1 -1720 5817 4281 38 68 0 0 chr10 21869517 21869590 -118447175 + AT_rich Low_complexity Low_complexity 1 73 0 21 36 0 0 chr10 21869673 21869701 -118447064 + AT_rich Low_complexity Low_complexity 1 28 0 514 224 0 0 chr10 21869897 21869995 -118446770 - MER57A-int LTR ERV1 -2886 3445 3348 1257 204 23 66 chr10 21870019 21870323 -118446442 - MER57A-int LTR ERV1 -2960 3371 3081 495 173 36 103 chr10 21870316 21870567 -118446198 - MER57A-int LTR ERV1 -3724 1982 1083 * 849 268 70 33 chr10 21870567 21870839 -118445926 - MER34C LTR ERV1 -155 430 149 386 303 35 14 chr10 21870839 21870981 -118445784 - MER57A-int LTR ERV1 -4138 985 841 3401 231 27 38 chr10 21871091 21871929 -118444836 - MER57A-int LTR ERV1 -6708 829 1 2322 179 0 34 chr10 21871929 21872342 -118444423 - MER57A LTR ERV1 0 403 5 425 232 283 15 chr10 21872439 21872637 -118444128 + MIR SINE MIR 7 257 -5 758 202 8 0 chr10 21872827 21872956 -118443809 - FLAM_C SINE Alu -2 131 2 368 296 75 38 chr10 21873150 21873336 -118443429 - MIR SINE MIR 0 262 70 980 238 66 24 chr10 21873337 21873675 -118443090 + MSTD LTR MaLR 1 396 0 6687 235 71 29 chr10 21873677 21875336 -118441429 + MSTD-int LTR MaLR 2 1730 -5 447 204 11 21 chr10 21875345 21875438 -118441327 + MSTD LTR MaLR 5 96 -332 985 166 24 6 chr10 21875455 21875624 -118441141 + MSTD LTR MaLR 225 396 0 1205 260 28 69 chr10 21875816 21876208 -118440557 + MER72 LTR ERV1 1 376 -346 2195 199 54 14 chr10 21876341 21876767 -118439998 + MER72 LTR ERV1 279 721 -1 207 0 0 0 chr10 21877425 21877448 -118439317 + (A)n Simple_repeat Simple_repeat 1 23 0 3064 189 14 0 chr10 21877954 21878467 -118438298 + MLT2B1 LTR ERVL 1 520 0 234 260 138 55 chr10 21878570 21878751 -118438014 - L2 LINE L2 0 3313 3118 455 267 77 72 chr10 21879211 21879406 -118437359 + MIR SINE MIR 53 248 -14 39 0 0 0 chr10 21879426 21879465 -118437300 + AT_rich Low_complexity Low_complexity 1 39 0 39081 47 1 3 chr10 21879470 21884225 -118432540 - L1P LINE L1 -1398 4748 4 1776 161 0 33 chr10 21884851 21885184 -118431581 + AluJb SINE Alu 1 323 0 1523 173 106 3 chr10 21886866 21887149 -118429616 + AluJo SINE Alu 1 312 0 1458 242 35 45 chr10 21887916 21888342 -118428423 + LTR9 LTR ERV1 191 612 0 2229 92 0 7 chr10 21888375 21888667 -118428098 + AluSp SINE Alu 12 301 -12 828 258 80 98 chr10 21889459 21890059 -118426706 + HAL1 LINE L1 1372 1960 -547 460 288 94 24 chr10 21890204 21890416 -118426349 + L1ME1 LINE L1 3730 3956 -2190 471 229 65 0 chr10 21890417 21890612 -118426153 + L1ME1 LINE L1 5221 5444 -722 877 154 15 0 chr10 21890613 21890749 -118426016 - AluJb SINE Alu -17 295 158 702 186 84 99 chr10 21890763 21890859 -118425906 + L1ME1 LINE L1 5459 5555 -611 2011 120 0 41 chr10 21890859 21891196 -118425569 - AluSc SINE Alu 0 325 1 1192 148 40 0 chr10 21891206 21891408 -118425357 - L1PB4 LINE L1 -1 6155 5946 702 186 84 99 chr10 21891408 21891562 -118425203 + L1ME1 LINE L1 5564 5717 -449 1297 210 17 33 chr10 21891562 21892051 -118424714 + MER74B LTR ERVL 53 616 -6 349 227 81 8 chr10 21892067 21892214 -118424551 + L1ME1 LINE L1 5727 5899 -285 1134 198 93 43 chr10 21892246 21892369 -118424396 + AluJo SINE Alu 11 126 -186 450 0 0 0 chr10 21892369 21892419 -118424346 + (CA)n Simple_repeat Simple_repeat 1 50 0 1134 198 93 43 chr10 21892419 21892553 -118424212 + AluJo SINE Alu 126 281 -31 948 245 42 0 chr10 21892562 21892823 -118423942 + L1ME1 LINE L1 5876 6147 -19 824 193 44 17 chr10 21892823 21893004 -118423761 - MLT1D LTR MaLR 0 505 320 2189 111 0 0 chr10 21893127 21893416 -118423349 + AluSg SINE Alu 1 289 -21 265 236 28 0 chr10 21893431 21893503 -118423262 - MLT1D LTR MaLR -357 148 75 390 253 13 0 chr10 21893508 21893587 -118423178 - MER5A DNA MER1_type -103 86 7 1573 187 0 32 chr10 21893915 21894199 -118422566 - AluJo SINE Alu -26 286 12 259 103 0 0 chr10 21894512 21894551 -118422214 - MADE1 DNA Mariner -37 43 5 512 287 58 20 chr10 21896027 21896375 -118420390 + L1ME4a LINE L1 4358 4718 -1428 424 280 107 42 chr10 21896514 21896674 -118420091 + L1ME4a LINE L1 5409 5557 -564 2147 141 33 28 chr10 21896674 21897036 -118419729 - THE1B LTR MaLR 0 364 1 424 280 107 42 chr10 21897036 21897372 -118419393 + L1ME4a LINE L1 5557 5935 -186 2068 109 9 58 chr10 21897522 21897851 -118418914 + AluSq SINE Alu 1 313 0 205 360 56 24 chr10 21898956 21899081 -118417684 + MIR SINE MIR 20 148 -114 3045 68 2 5 chr10 21899361 21899770 -118416995 + L1PA13 LINE L1 5753 6160 -3 2215 113 0 3 chr10 21900970 21901272 -118415493 - AluSx SINE Alu -11 301 1 2267 136 11 3 chr10 21901890 21902242 -118414523 + THE1A LTR MaLR 1 355 0 2671 102 0 3 chr10 21904069 21904432 -118412333 - THE1B LTR MaLR -2 362 1 755 206 0 0 chr10 21904435 21904566 -118412199 + FRAM SINE Alu 28 158 -18 556 282 83 34 chr10 21904581 21904959 -118411806 + LTR16A LTR ERVL 18 418 -32 237 319 159 14 chr10 21905087 21905225 -118411540 + MIR SINE MIR 105 262 0 2014 196 24 9 chr10 21905387 21905806 -118410959 + MSTB1 LTR MaLR 8 432 0 23 0 0 0 chr10 21906699 21906722 -118410043 + AT_rich Low_complexity Low_complexity 1 23 0 562 307 133 16 chr10 21907121 21907610 -118409155 - L1ME LINE L1 -359 5803 5258 25 51 0 0 chr10 21907631 21907670 -118409095 + AT_rich Low_complexity Low_complexity 1 39 0 13133 188 35 22 chr10 21907881 21910898 -118405867 - L1PB1 LINE L1 0 6867 3890 180 0 0 0 chr10 21910898 21910918 -118405847 + (TTG)n Simple_repeat Simple_repeat 2 21 0 13133 188 35 22 chr10 21910918 21914274 -118402491 - L1PB1 LINE L1 -2977 3890 216 3367 69 5 7 chr10 21914274 21914723 -118402042 - LTR7 LTR ERV1 -2 448 1 13133 188 35 22 chr10 21914723 21914937 -118401828 - L1PB1 LINE L1 -6651 216 6 499 323 101 46 chr10 21914948 21915475 -118401290 - L1ME LINE L1 -1194 4952 4409 516 257 28 86 chr10 21915607 21915934 -118400831 - L1ME LINE L1 -1985 4161 3854 293 188 0 14 chr10 21916357 21916426 -118400339 - MER41B LTR ERV1 -310 325 258 2137 101 0 44 chr10 21916533 21916853 -118399912 - AluSp SINE Alu 0 307 1 494 331 61 27 chr10 21917232 21917607 -118399158 - L1ME LINE L1 -2320 3826 3439 243 284 134 25 chr10 21917648 21917916 -118398849 - L1ME LINE L1 -2751 3395 3069 1795 150 97 29 chr10 21917916 21918256 -118398509 - THE1B LTR MaLR -1 363 1 243 284 134 25 chr10 21918256 21918381 -118398384 - L1ME LINE L1 -3077 3069 2959 2031 238 73 18 chr10 21918470 21919407 -118397358 - L1ME1 LINE L1 -179 5987 5008 306 329 142 15 chr10 21919679 21919953 -118396812 - L1ME3 LINE L1 -211 5951 5643 664 252 28 8 chr10 21919996 21920246 -118396519 - L1ME3 LINE L1 -563 5607 5353 3648 139 11 26 chr10 21920260 21920721 -118396044 - Tigger1 DNA MER2_type -7 2411 1961 2398 73 0 3 chr10 21920721 21921021 -118395744 + AluY SINE Alu 1 299 -12 3648 139 11 26 chr10 21921021 21921201 -118395564 - Tigger1 DNA MER2_type -457 1961 1780 610 254 244 3 chr10 21921263 21921562 -118395203 - HsTC2 DNA Tc2 -1508 390 20 345 298 39 0 chr10 21921574 21921678 -118395087 + MER81 DNA DNA 1 108 -6 2774 13 0 3 chr10 21921745 21922054 -118394711 + AluYa5 SINE Alu 1 308 -3 306 324 76 36 chr10 21922332 21922582 -118394183 - L2 LINE L2 -58 3255 2996 2325 111 0 0 chr10 21922738 21923045 -118393720 - AluSx SINE Alu -5 307 1 460 88 71 80 chr10 21923052 21923165 -118393600 + L1MA9 LINE L1 6129 6240 -72 253 110 68 0 chr10 21923165 21923238 -118393527 + (TA)n Simple_repeat Simple_repeat 1 78 0 226 132 113 0 chr10 21923241 21923294 -118393471 - L1MA9 LINE L1 -9 6303 6245 240 122 102 0 chr10 21923305 21923354 -118393411 + L1MA9 LINE L1 6256 6309 -3 346 284 98 76 chr10 21923487 21923762 -118393003 - L1MEd LINE L1 -5555 564 284 345 293 65 16 chr10 21923916 21924039 -118392726 - L1MEd LINE L1 -5922 197 69 241 302 127 16 chr10 21924631 21924757 -118392008 + MIR SINE MIR 2 141 -121 286 367 51 0 chr10 21924986 21925084 -118391681 + L2 LINE L2 3116 3218 -54 276 30 0 0 chr10 21925472 21925505 -118391260 + (TG)n Simple_repeat Simple_repeat 2 34 0 2680 88 3 0 chr10 21926042 21926396 -118390369 - THE1A LTR MaLR 0 355 1 279 109 250 0 chr10 21926604 21926668 -118390097 + MADE1 DNA Mariner 1 80 0 1540 191 28 58 chr10 21926919 21927281 -118389484 + MLT2B3 LTR ERVL 204 554 0 3801 239 78 70 chr10 21927281 21929002 -118387763 + MLT1A1-int LTR MaLR 1 1735 0 1233 164 38 116 chr10 21929007 21929403 -118387362 + MLT1A1 LTR MaLR 1 365 0 3331 287 67 16 chr10 21929457 21930628 -118386137 - L2 LINE L2 -384 2930 1701 286 333 133 6 chr10 21931346 21931511 -118385254 - MIR SINE MIR -21 241 56 277 388 23 0 chr10 21932578 21932707 -118384058 - L2 LINE L2 -957 2357 2226 381 328 140 8 chr10 21933052 21933317 -118383448 - L1M4 LINE L1 -1550 4596 4297 226 185 65 65 chr10 21933433 21933525 -118383240 + L1M4 LINE L1 4725 4816 -1330 439 314 79 60 chr10 21933595 21934015 -118382750 + L1M4 LINE L1 4878 5305 -841 21 0 0 0 chr10 21934115 21934136 -118382629 + AT_rich Low_complexity Low_complexity 1 21 0 363 317 90 64 chr10 21935171 21935780 -118380985 + L1ME LINE L1 4676 5300 -846 274 381 17 0 chr10 21935928 21936109 -118380656 + L1ME LINE L1 5465 5648 -514 741 319 126 17 chr10 21936363 21936768 -118379997 - MLT1G1 LTR MaLR 0 595 147 283 246 71 56 chr10 21936896 21937022 -118379743 - MLT1G1-int LTR MaLR -30 1341 1214 406 269 0 9 chr10 21937881 21937989 -118378776 - MLT1G1-int LTR MaLR -826 545 439 634 308 147 8 chr10 21938389 21938756 -118378009 - L2 LINE L2 -908 2406 1989 1973 130 43 10 chr10 21938762 21939063 -118377702 + AluSx SINE Alu 1 311 -1 3771 139 12 64 chr10 21941066 21941224 -118375541 + L1MA8 LINE L1 5548 5713 -578 1336 222 21 21 chr10 21941224 21941378 -118375387 - AluJo SINE Alu -24 288 132 207 0 0 0 chr10 21941378 21941401 -118375364 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1336 222 21 21 chr10 21941401 21941534 -118375231 - AluJo SINE Alu -179 133 1 3771 139 12 64 chr10 21941534 21941887 -118374878 + L1MA8 LINE L1 5713 6008 -283 2494 64 0 0 chr10 21941887 21942198 -118374567 + AluY SINE Alu 1 311 0 3771 139 12 64 chr10 21942198 21942450 -118374315 + L1MA8 LINE L1 6008 6272 -19 252 261 59 8 chr10 21942463 21942582 -118374183 + L1ME4a LINE L1 5960 6084 -37 25 31 0 0 chr10 21942618 21942650 -118374115 + AT_rich Low_complexity Low_complexity 1 32 0 2130 129 3 3 chr10 21942862 21943164 -118373601 + AluSx SINE Alu 1 302 -10 630 282 60 30 chr10 21943683 21943917 -118372848 - MIR SINE MIR -20 242 2 2093 127 7 3 chr10 21945098 21945397 -118371368 + AluSx SINE Alu 1 300 -12 23 33 0 0 chr10 21946053 21946083 -118370682 + AT_rich Low_complexity Low_complexity 1 30 0 2200 124 0 0 chr10 21946599 21946906 -118369859 + AluSg SINE Alu 1 307 -3 240 35 0 0 chr10 21947825 21947854 -118368911 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 342 325 52 100 chr10 21948191 21948270 -118368495 + L2 LINE L2 2997 3078 -194 1222 205 46 60 chr10 21948270 21948640 -118368125 + MLT1A1 LTR MaLR 1 365 0 342 325 52 100 chr10 21948640 21948849 -118367916 + L2 LINE L2 3078 3271 -1 216 0 0 0 chr10 21949072 21949096 -118367669 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 566 63 13 0 chr10 21949284 21949363 -118367402 + (TTTCC)n Simple_repeat Simple_repeat 5 84 0 690 13 0 0 chr10 21949499 21949578 -118367187 + (TTTCC)n Simple_repeat Simple_repeat 3 81 0 22 35 0 0 chr10 21951400 21951429 -118365336 + AT_rich Low_complexity Low_complexity 1 29 0 344 231 26 0 chr10 21951516 21951594 -118365171 - L1MB8 LINE L1 -6 6172 6093 2385 153 19 2 chr10 21951626 21952043 -118364722 - L1MB4 LINE L1 -33 6147 5724 775 133 24 12 chr10 21953692 21953858 -118362907 + CT-rich Low_complexity Low_complexity 1 168 0 989 180 84 63 chr10 21953858 21954097 -118362668 - AluJo SINE Alu -18 294 51 624 154 0 0 chr10 21956390 21956494 -118360271 - MER5A DNA MER1_type -83 106 3 2195 129 3 0 chr10 21957088 21957391 -118359374 - AluSp SINE Alu -9 304 1 28 48 0 0 chr10 21957458 21957500 -118359265 + AT_rich Low_complexity Low_complexity 1 42 0 5999 101 18 9 chr10 21958116 21959145 -118357620 + L1PA10 LINE L1 5135 6172 0 2197 96 13 7 chr10 21959527 21959830 -118356935 + AluSx SINE Alu 1 305 -7 1900 149 7 3 chr10 21960652 21960961 -118355804 - AluSq SINE Alu -3 310 1 2118 173 5 16 chr10 21961024 21961393 -118355372 + MLT1A1 LTR MaLR 1 365 0 318 328 72 8 chr10 21961406 21961531 -118355234 - L2 LINE L2 0 3272 3140 1641 165 23 42 chr10 21961704 21962013 -118354752 + AluJo SINE Alu 1 303 -9 321 26 0 0 chr10 21962043 21962081 -118354684 + (CA)n Simple_repeat Simple_repeat 1 38 0 2086 254 27 24 chr10 21962856 21963557 -118353208 + L1M4 LINE L1 4594 5296 -850 * 6908 42 1 8 chr10 21963555 21964425 -118352340 - L1PA5 LINE L1 -1048 5098 4235 7398 41 1 1 chr10 21964425 21965472 -118351293 + L1PA5 LINE L1 5106 6152 -2 8134 214 23 12 chr10 21965506 21967423 -118349342 - L1PA15 LINE L1 -2 6163 4217 2298 74 14 0 chr10 21967423 21967719 -118349046 - AluY SINE Alu -11 300 1 8134 214 23 12 chr10 21967719 21968622 -118348143 - L1PA15 LINE L1 -1948 4217 3326 216 0 0 0 chr10 21968726 21968750 -118348015 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 26 0 0 0 chr10 21968750 21968776 -118347989 + AT_rich Low_complexity Low_complexity 1 26 0 2330 82 0 22 chr10 21969046 21969364 -118347401 - AluY SINE Alu 0 311 1 1858 247 87 49 chr10 21969817 21970220 -118346545 + L1MEc LINE L1 425 811 -5585 291 28 0 0 chr10 21970220 21970256 -118346509 + (TA)n Simple_repeat Simple_repeat 1 36 0 1858 247 87 49 chr10 21970256 21971461 -118345304 + L1MEc LINE L1 811 2167 -4229 2204 116 0 0 chr10 21971461 21971755 -118345010 + AluSc SINE Alu 1 294 -15 1858 247 87 49 chr10 21971755 21972046 -118344719 + L1MEc LINE L1 2167 2445 -3951 287 278 11 0 chr10 21972217 21972307 -118344458 + L1MEc LINE L1 2567 2657 -3558 1030 235 29 7 chr10 21972322 21972594 -118344171 + L1MEc LINE L1 3572 3849 -2366 1466 226 7 0 chr10 21972605 21972893 -118343872 + AluJo SINE Alu 3 292 -20 24 32 0 0 chr10 21972949 21972980 -118343785 + AT_rich Low_complexity Low_complexity 1 31 0 4051 116 14 5 chr10 21973591 21974210 -118342555 + L1PA13 LINE L1 5537 6161 -2 755 109 0 179 chr10 21974728 21974912 -118341853 + MLT2A1 LTR ERVL 294 444 0 263 290 65 9 chr10 21975850 21975957 -118340808 - L1ME4a LINE L1 -42 6079 5967 7699 201 115 30 chr10 21975996 21978224 -118338541 + Tigger1 DNA MER2_type 1 2417 -1 520 273 78 55 chr10 21978240 21978673 -118338092 - L1ME4a LINE L1 -234 5887 5445 232 312 85 20 chr10 21978709 21978956 -118337809 + L1M4 LINE L1 4574 4836 -1310 688 328 93 20 chr10 21979137 21979359 -118337406 + L2 LINE L2 2874 3078 -235 2047 148 3 0 chr10 21979359 21979662 -118337103 - AluSq SINE Alu -7 306 3 688 328 93 20 chr10 21979662 21979847 -118336918 + L2 LINE L2 3078 3311 -2 22 0 0 0 chr10 21980395 21980417 -118336348 + AT_rich Low_complexity Low_complexity 1 22 0 2764 88 3 0 chr10 21980918 21981280 -118335485 + THE1B LTR MaLR 1 363 -1 409 297 91 67 chr10 21981547 21981720 -118335045 - MIR SINE MIR 0 262 71 782 109 86 0 chr10 21981720 21981848 -118334917 + MER85 DNA T2_type 1 139 0 409 297 91 67 chr10 21981848 21981921 -118334844 - MIR SINE MIR -191 71 1 1226 205 137 54 chr10 21982004 21982326 -118334439 - MLT1C LTR MaLR 0 467 100 1860 159 7 19 chr10 21982326 21982635 -118334130 - AluSx SINE Alu -5 307 3 1226 205 137 54 chr10 21982635 21982737 -118334028 - MLT1C LTR MaLR -367 100 8 1701 170 18 14 chr10 21983191 21983506 -118333259 + AluSx SINE Alu 1 316 0 1535 151 14 51 chr10 21985054 21985346 -118331419 + AluJo SINE Alu 26 306 -6 1370 275 22 24 chr10 21985873 21986284 -118330481 - LTR40a LTR ERVL -14 505 96 8911 153 12 5 chr10 21986337 21986438 -118330327 + Tigger3(Golem) DNA MER2_type 1 100 -2929 2435 133 68 2 chr10 21986438 21986867 -118329898 + MSTB2 LTR MaLR 1 457 0 8911 153 12 5 chr10 21986867 21988202 -118328563 + Tigger3(Golem) DNA MER2_type 100 1447 -1582 3362 134 13 26 chr10 21988206 21988812 -118327953 + Tigger3(Golem) DNA MER2_type 1558 2155 -874 1696 152 0 17 chr10 21989184 21989480 -118327285 - L1PB4 LINE L1 -7 6149 5859 267 244 111 44 chr10 21990825 21990915 -118325850 + MIR SINE MIR 39 134 -128 20846 43 6 0 chr10 21991032 21994221 -118322544 + L1P LINE L1 1239 4446 -1700 2248 153 12 75 chr10 21994543 21995151 -118321614 - L1MCb LINE L1 -4878 1167 709 923 224 32 8 chr10 21995142 21995392 -118321373 - L1MCb LINE L1 -6152 412 157 * 23 33 0 0 chr10 21995424 21995454 -118321311 + AT_rich Low_complexity Low_complexity 1 30 0 352 293 20 27 chr10 21995803 21995953 -118320812 - MIR SINE MIR -24 238 90 655 169 19 50 chr10 21995958 21996118 -118320647 - MER33 DNA MER1_type -169 155 1 567 282 115 4 chr10 21996206 21996440 -118320325 - MIR SINE MIR 0 262 3 313 358 74 18 chr10 21997294 21997523 -118319242 - MIR SINE MIR -1 261 20 353 294 111 7 chr10 21997547 21997695 -118319070 - MIR SINE MIR -73 135 9 22 0 0 0 chr10 21998406 21998428 -118318337 + AT_rich Low_complexity Low_complexity 1 22 0 278 290 40 30 chr10 21998569 21998769 -118317996 - L1ME2 LINE L1 -232 5932 5731 1329 202 95 26 chr10 21998847 21999194 -118317571 - MLT1B LTR MaLR -19 371 1 344 304 212 0 chr10 21999221 21999405 -118317360 + MIR SINE MIR 16 238 -24 1653 183 0 11 chr10 21999455 21999729 -118317036 + AluJo SINE Alu 11 281 -31 301 383 10 0 chr10 21999750 21999943 -118316822 - L1ME2 LINE L1 -2169 5639 5445 339 318 7 61 chr10 22000187 22000335 -118316430 - MER5A DNA MER1_type 0 189 50 183 316 41 31 chr10 22000505 22000603 -118316162 + MIR3 SINE MIR 105 203 -5 349 259 127 0 chr10 22001155 22001321 -118315444 + L1ME LINE L1 5476 5662 -459 2059 136 0 3 chr10 22001612 22001898 -118314867 + AluSx SINE Alu 1 285 -27 27 0 0 0 chr10 22001898 22001925 -118314840 + AT_rich Low_complexity Low_complexity 1 27 0 251 263 0 0 chr10 22002681 22002738 -118314027 + CT-rich Low_complexity Low_complexity 2 58 0 1436 100 50 5 chr10 22002791 22003011 -118313754 + MER30 DNA MER1_type 1 230 0 21 0 0 0 chr10 22003564 22003585 -118313180 + AT_rich Low_complexity Low_complexity 1 21 0 3203 187 30 3 chr10 22004557 22005200 -118311565 - LTR62 LTR ERVK -8 711 52 2311 64 0 3 chr10 22006403 22006706 -118310059 + AluY SINE Alu 2 303 0 12300 77 3 4 chr10 22006861 22008544 -118308221 + L1P LINE L1 1 1681 -4465 38561 51 2 2 chr10 22008736 22013801 -118302964 - L1P LINE L1 -1083 5063 1 1195 214 29 63 chr10 22013953 22014037 -118302728 + MLT1A1 LTR MaLR 1 86 -279 1798 184 0 0 chr10 22014037 22014350 -118302415 - AluSx SINE Alu 0 315 3 1195 214 29 63 chr10 22014350 22014417 -118302348 + MLT1A1 LTR MaLR 86 154 -211 1836 139 78 20 chr10 22014417 22014761 -118302004 + THE1B LTR MaLR 1 364 0 1195 214 29 63 chr10 22014761 22014985 -118301780 + MLT1A1 LTR MaLR 154 365 0 1597 189 7 23 chr10 22015760 22016061 -118300704 - AluJb SINE Alu -16 296 1 225 200 20 0 chr10 22016287 22016337 -118300428 + CT-rich Low_complexity Low_complexity 2 52 0 206 209 47 0 chr10 22016578 22016621 -118300144 + MER5A DNA MER1_type 144 188 -1 685 329 27 9 chr10 22018942 22019161 -118297604 + MIR SINE MIR 1 223 -39 2223 146 72 0 chr10 22019175 22019579 -118297186 - MER1A DNA MER1_type 0 529 97 251 75 25 0 chr10 22019697 22019737 -118297028 - LTR62 LTR ERVK -668 51 11 393 318 43 2 chr10 22020192 22020362 -118296403 - MIR3 SINE MIR -44 218 33 23 68 0 0 chr10 22021581 22021625 -118295140 + AT_rich Low_complexity Low_complexity 1 44 0 4154 173 48 46 chr10 22021687 22022181 -118294584 + L1MA10 LINE L1 4456 4948 -1386 180 0 0 0 chr10 22022181 22022201 -118294564 + (CA)n Simple_repeat Simple_repeat 1 20 0 4154 173 48 46 chr10 22022201 22022824 -118293941 + L1MA10 LINE L1 4948 5569 -765 1989 135 3 0 chr10 22022824 22023231 -118293534 + AluSx SINE Alu 1 408 0 4154 173 48 46 chr10 22023231 22023679 -118293086 + L1MA10 LINE L1 5569 6032 -302 1865 141 44 56 chr10 22023679 22024020 -118292745 + MER1B DNA MER1_type 1 337 0 4154 173 48 46 chr10 22024020 22024322 -118292443 + L1MA10 LINE L1 6032 6332 -2 11705 28 1 15 chr10 22025103 22027269 -118289496 + L1PA4 LINE L1 3998 6152 -3 536 277 27 0 chr10 22027447 22027631 -118289134 - MER5A DNA MER1_type 0 189 1 558 307 47 43 chr10 22027722 22027979 -118288786 + MIR SINE MIR 2 259 -3 2102 104 0 44 chr10 22027979 22028296 -118288469 + AluY SINE Alu 1 303 -8 1620 302 167 7 chr10 22028356 22029038 -118287727 + L2 LINE L2 520 1310 -2004 251 347 24 16 chr10 22029134 22029258 -118287507 + LTR16C LTR ERVL 65 189 -302 1587 205 36 31 chr10 22030281 22030730 -118286035 - MLT1C LTR MaLR -9 458 8 703 271 34 30 chr10 22031271 22031540 -118285225 + MLT1I LTR MaLR 1 270 -139 23 0 0 0 chr10 22031996 22032019 -118284746 + AT_rich Low_complexity Low_complexity 1 23 0 1067 229 0 8 chr10 22033065 22033309 -118283456 + L1PB4 LINE L1 5912 6153 -3 2756 222 58 9 chr10 22033805 22034562 -118282203 - L1PB3 LINE L1 -3 6151 5358 1604 123 29 48 chr10 22034708 22035018 -118281747 - L1MA1 LINE L1 -2 6300 5997 652 180 0 23 chr10 22035192 22035320 -118281445 + MER94 DNA DNA 8 132 -2 2192 125 0 13 chr10 22035358 22035670 -118281095 + AluSq SINE Alu 1 308 -5 214 370 0 12 chr10 22036369 22036450 -118280315 + MIR3 SINE MIR 120 199 -9 357 174 0 0 chr10 22037086 22037155 -118279610 + (TATG)n Simple_repeat Simple_repeat 2 70 0 700 186 32 0 chr10 22037156 22037280 -118279485 - FLAM_C SINE Alu -14 129 2 24 0 0 0 chr10 22038154 22038178 -118278587 + AT_rich Low_complexity Low_complexity 1 24 0 229 182 0 91 chr10 22038781 22038836 -118277929 + MLT1J1 LTR MaLR 4 53 -393 682 196 18 105 chr10 22038847 22039076 -118277689 - MER3 DNA MER1_type 0 209 1 1780 28 5 0 chr10 22039730 22039947 -118276818 - L1P2 LINE L1 -447 5707 5490 1632 62 5 0 chr10 22039949 22040160 -118276605 + L1PA5 LINE L1 5928 6139 -15 330 182 0 0 chr10 22040160 22040226 -118276539 + (TA)n Simple_repeat Simple_repeat 1 66 0 284 250 111 76 chr10 22040579 22040723 -118276042 - MIR3 SINE MIR -47 161 13 265 282 14 0 chr10 22041251 22041322 -118275443 - MIR3 SINE MIR -15 193 122 21 0 0 0 chr10 22042639 22042660 -118274105 + AT_rich Low_complexity Low_complexity 1 21 0 647 270 30 100 chr10 22042660 22042763 -118274002 - MIR SINE MIR -3 259 150 2347 123 34 14 chr10 22042763 22043120 -118273645 - THE1B LTR MaLR 0 364 1 647 270 30 100 chr10 22043120 22043304 -118273461 - MIR SINE MIR -112 150 3 197 257 0 0 chr10 22043341 22043376 -118273389 + L2 LINE L2 3211 3245 -27 1821 192 69 5 chr10 22043635 22044010 -118272755 - MLT1D LTR MaLR -106 399 1 180 0 0 0 chr10 22044606 22044626 -118272139 + (A)n Simple_repeat Simple_repeat 1 20 0 438 296 155 24 chr10 22044626 22044832 -118271933 + MIR SINE MIR 20 252 -10 611 271 66 6 chr10 22045478 22045659 -118271106 - Charlie8 DNA MER1_type -2193 224 33 761 152 7 7 chr10 22046441 22046579 -118270186 - L1PB2 LINE L1 -2 6149 6012 279 0 0 0 chr10 22046913 22046944 -118269821 + (T)n Simple_repeat Simple_repeat 1 31 0 23093 175 23 13 chr10 22049630 22054886 -118261879 - L1PA13 LINE L1 -1045 5752 1 1604 188 0 0 chr10 22054901 22055177 -118261588 + L1MC/D LINE L1 5311 5586 -758 408 200 30 0 chr10 22055177 22055272 -118261493 + L1MC2 LINE L1 6242 6344 0 21 0 0 0 chr10 22055323 22055344 -118261421 + AT_rich Low_complexity Low_complexity 1 21 0 274 252 39 19 chr10 22056547 22056650 -118260115 + L1ME LINE L1 5410 5514 -650 2306 219 99 12 chr10 22056827 22057656 -118259109 - L1ME1 LINE L1 -125 6041 5135 185 309 0 0 chr10 22058087 22058142 -118258623 - MIR SINE MIR -6 256 202 374 391 21 11 chr10 22058467 22058656 -118258109 - MIR SINE MIR -49 213 23 238 301 20 65 chr10 22059015 22059168 -118257597 + MLT1H LTR MaLR 50 195 -354 370 272 132 44 chr10 22059661 22059911 -118256854 + L2 LINE L2 2332 2603 -711 832 178 76 23 chr10 22060022 22060286 -118256479 - MER33 DNA MER1_type 0 324 47 2219 178 19 9 chr10 22061441 22061862 -118254903 + MSTB LTR MaLR 1 425 -1 269 300 9 9 chr10 22063116 22063226 -118253539 - L1MC4 LINE L1 0 8042 7933 581 242 60 32 chr10 22063274 22063522 -118253243 - L1MC4 LINE L1 -190 7852 7598 24 0 0 0 chr10 22063528 22063552 -118253213 + AT_rich Low_complexity Low_complexity 1 24 0 269 23 0 70 chr10 22063553 22063596 -118253169 + (TTTTA)n Simple_repeat Simple_repeat 2 41 0 8934 31 0 0 chr10 22063596 22065438 -118251327 - L1PA4 LINE L1 -4 6151 4305 29076 59 2 7 chr10 22065438 22069210 -118247555 - L1PA4 LINE L1 -2388 3758 7 23 0 0 0 chr10 22069365 22069388 -118247377 + AT_rich Low_complexity Low_complexity 1 23 0 2115 123 0 3 chr10 22070301 22070602 -118246163 + AluSc SINE Alu 1 300 -9 1466 221 17 25 chr10 22071231 22071588 -118245177 + MLT1A1 LTR MaLR 1 354 -11 267 338 100 23 chr10 22072540 22072746 -118244019 - MIR SINE MIR -36 226 2 181 206 0 0 chr10 22072824 22072858 -118243907 + L2 LINE L2 3272 3305 -8 1012 311 95 7 chr10 22072879 22073532 -118243233 - L2 LINE L2 -37 3276 2557 282 143 0 0 chr10 22074274 22074323 -118242442 + (A)n Simple_repeat Simple_repeat 1 49 0 415 189 7 115 chr10 22075036 22075184 -118241581 + MLT1E2 LTR MaLR 18 149 -477 1414 135 0 0 chr10 22076133 22076333 -118240432 + AluSx SINE Alu 12 211 -101 24 0 0 0 chr10 22076333 22076357 -118240408 + AT_rich Low_complexity Low_complexity 1 24 0 1390 224 78 20 chr10 22077182 22077580 -118239185 + L1MB8 LINE L1 5406 5826 -352 * 1580 171 55 64 chr10 22077574 22077712 -118239053 + L1MB8 LINE L1 5762 5900 -278 2175 140 0 0 chr10 22077712 22078020 -118238745 - AluSq SINE Alu -5 308 1 1580 171 55 64 chr10 22078020 22078302 -118238463 + L1MB8 LINE L1 5900 6178 0 231 213 0 0 chr10 22079203 22079250 -118237515 + L1MB8 LINE L1 6132 6178 0 423 133 76 38 chr10 22079323 22079428 -118237337 - L1MB8 LINE L1 -11 6167 6059 1325 168 23 61 chr10 22081158 22081322 -118235443 - AluJo SINE Alu -31 281 129 378 0 0 0 chr10 22081322 22081364 -118235401 + (TA)n Simple_repeat Simple_repeat 2 43 0 1325 168 23 61 chr10 22081364 22081461 -118235304 - AluJo SINE Alu -183 129 30 181 303 28 55 chr10 22083738 22083847 -118232918 - MIR SINE MIR -104 158 53 32629 48 3 1 chr10 22084161 22089094 -118227671 - L1PA4 LINE L1 -3 6152 1210 2137 135 0 0 chr10 22089717 22090020 -118226745 - AluSx SINE Alu -9 303 1 243 328 9 17 chr10 22090281 22090397 -118226368 - L1ME4a LINE L1 -60 6061 5947 25 51 0 0 chr10 22090583 22090622 -118226143 + AT_rich Low_complexity Low_complexity 1 39 0 1308 128 66 4 chr10 22090622 22090864 -118225901 - L1MA4 LINE L1 -2 6298 6042 204 97 0 0 chr10 22091738 22091769 -118224996 + (TCTCC)n Simple_repeat Simple_repeat 5 35 0 638 159 0 19 chr10 22091772 22091879 -118224886 - FLAM_A SINE Alu -34 108 4 303 206 14 0 chr10 22091928 22092001 -118224764 + L1MA10 LINE L1 6260 6333 -1 2032 216 36 6 chr10 22092003 22092531 -118224234 - L1M4c LINE L1 -3906 2478 1935 209 313 101 0 chr10 22093335 22093434 -118223331 + MIR SINE MIR 101 209 -53 252 182 15 76 chr10 22093671 22093737 -118223028 - MIR3 SINE MIR -8 200 139 1789 190 45 30 chr10 22094499 22094740 -118222025 + MLT2D LTR ERVL 1 252 -162 2052 110 0 44 chr10 22094740 22095057 -118221708 - AluSx SINE Alu -9 303 1 1789 190 45 30 chr10 22095057 22095215 -118221550 + MLT2D LTR ERVL 252 406 -8 389 286 9 9 chr10 22095963 22096068 -118220697 - MIR SINE MIR -67 141 37 23 33 0 0 chr10 22096210 22096240 -118220525 + AT_rich Low_complexity Low_complexity 1 30 0 2333 76 0 7 chr10 22096869 22097173 -118219592 + AluY SINE Alu 1 302 -9 5272 138 42 24 chr10 22097271 22098259 -118218506 - L1MA8 LINE L1 -2 6289 5285 2242 80 22 26 chr10 22099343 22099656 -118217109 - AluSx SINE Alu 0 312 1 22 35 0 0 chr10 22099897 22099926 -118216839 + AT_rich Low_complexity Low_complexity 1 29 0 1702 225 28 5 chr10 22101013 22101439 -118215326 + MER63B DNA MER1_type 1 436 0 612 269 107 5 chr10 22101447 22101644 -118215121 + MIR SINE MIR 46 262 0 2889 112 9 2 chr10 22101666 22102113 -118214652 + MER41B LTR ERV1 95 544 -91 1757 116 14 28 chr10 22102445 22102715 -118214050 + L1PA15 LINE L1 5886 6153 -12 1949 141 157 5 chr10 22102715 22103084 -118213681 - MSTA LTR MaLR 0 428 4 1757 116 14 28 chr10 22103084 22103097 -118213668 + L1PA15 LINE L1 6153 6165 0 2020 168 23 29 chr10 22103097 22103415 -118213350 + MSTB LTR MaLR 41 358 -68 1925 101 101 0 chr10 22103415 22103683 -118213082 - AluSc SINE Alu -12 297 3 2020 168 23 29 chr10 22103683 22103750 -118213015 + MSTB LTR MaLR 358 424 -2 561 270 66 21 chr10 22103896 22104137 -118212628 - MER112 DNA MER1_type -2 254 3 6940 66 0 14 chr10 22104239 22105567 -118211198 + L1PA8 LINE L1 4842 6162 -10 569 239 43 38 chr10 22106077 22106261 -118210504 - L1ME1 LINE L1 -20 6146 5962 28 0 0 0 chr10 22106267 22106295 -118210470 + AT_rich Low_complexity Low_complexity 1 28 0 1602 182 23 23 chr10 22107285 22107592 -118209173 - AluJo SINE Alu -5 307 1 1998 144 13 0 chr10 22107592 22107890 -118208875 - AluSx SINE Alu -10 302 1 206 143 29 0 chr10 22107928 22107963 -118208802 + (TATG)n Simple_repeat Simple_repeat 3 38 0 1920 141 4 0 chr10 22108473 22108749 -118208016 + AluSx SINE Alu 1 277 -35 422 0 0 36 chr10 22108781 22108836 -118207929 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 1081 66 0 0 chr10 22108836 22108972 -118207793 + L1PA10 LINE L1 6032 6167 -1 296 252 78 0 chr10 22109285 22109388 -118207377 + MER117 DNA MER1_type 47 157 -40 1989 167 0 3 chr10 22109580 22109885 -118206880 - AluJb SINE Alu -6 306 3 1502 113 0 5 chr10 22110001 22110205 -118206560 - AluSc SINE Alu 0 309 107 21 0 0 0 chr10 22111182 22111203 -118205562 + AT_rich Low_complexity Low_complexity 1 21 0 350 275 98 79 chr10 22114858 22115276 -118201489 - L1MEc LINE L1 -4094 2302 1877 212 167 0 0 chr10 22115284 22115320 -118201445 + (TG)n Simple_repeat Simple_repeat 1 36 0 2246 115 0 34 chr10 22115508 22115831 -118200934 - AluSx SINE Alu 0 312 1 1958 154 0 13 chr10 22116141 22116452 -118200313 + AluJb SINE Alu 1 307 -5 1848 202 108 27 chr10 22116540 22117060 -118199705 - MER68 LTR ERV1 0 562 1 677 172 30 98 chr10 22117375 22117578 -118199187 - MER20 DNA MER1_type 0 219 31 240 299 27 61 chr10 22117672 22117819 -118198946 - MIR SINE MIR -54 208 67 636 295 98 9 chr10 22117863 22118087 -118198678 - MIR SINE MIR 0 262 19 2226 84 0 3 chr10 22120046 22120358 -118196407 - AluSx SINE Alu 0 311 1 415 294 32 105 chr10 22121893 22122264 -118194501 - L2 LINE L2 -14 3258 2915 2058 98 4 0 chr10 22124744 22125019 -118191746 - AluSg1 SINE Alu -33 276 1 2089 133 10 7 chr10 22125645 22125954 -118190811 + AluSx SINE Alu 1 310 -2 372 321 42 31 chr10 22126523 22126716 -118190049 - MIR SINE MIR -56 206 12 1547 162 29 42 chr10 22127955 22128264 -118188501 + AluJo SINE Alu 1 305 -7 228 208 21 0 chr10 22128564 22128612 -118188153 - L1MC4a LINE L1 -1149 6659 6611 21 36 0 0 chr10 22128825 22128853 -118187912 + AT_rich Low_complexity Low_complexity 1 28 0 1843 274 71 15 chr10 22128891 22129668 -118187097 - L1MC4a LINE L1 -1735 6073 5254 448 325 142 21 chr10 22129756 22130088 -118186677 - L1MC4a LINE L1 -985 5161 4790 296 279 84 84 chr10 22130173 22130352 -118186413 - MIR3 SINE MIR -2 206 28 2034 85 7 14 chr10 22130713 22131031 -118185734 - AluY SINE Alu 0 316 1 484 291 54 35 chr10 22131042 22131230 -118185535 - MIR SINE MIR -12 250 61 2218 113 3 0 chr10 22131230 22131522 -118185243 - AluSx SINE Alu -19 293 1 484 291 54 35 chr10 22131522 22131578 -118185187 - MIR SINE MIR -201 61 8 23 0 0 0 chr10 22131668 22131691 -118185074 + AT_rich Low_complexity Low_complexity 1 23 0 1951 153 0 29 chr10 22132889 22133203 -118183562 + AluSx SINE Alu 1 305 -7 30 0 0 0 chr10 22133265 22133295 -118183470 + AT_rich Low_complexity Low_complexity 1 30 0 5140 22 0 0 chr10 22133751 22134339 -118182426 + L1PA3 LINE L1 5563 6150 -5 1357 136 226 0 chr10 22134496 22134739 -118182026 + AluSx SINE Alu 1 298 -14 373 264 80 49 chr10 22135821 22135984 -118180781 + L1M4 LINE L1 3784 3951 -2195 761 176 0 0 chr10 22136537 22136662 -118180103 + FLAM_C SINE Alu 1 125 -18 276 102 0 0 chr10 22136668 22136717 -118180048 + Alu SINE Alu 251 299 -1 1075 157 28 6 chr10 22137128 22137306 -118179459 - AluJo SINE Alu -10 302 121 222 274 24 24 chr10 22138313 22138397 -118178368 + MIR SINE MIR 141 224 -38 1784 186 14 0 chr10 22138418 22138713 -118178052 - AluJo SINE Alu -13 299 1 203 171 0 0 chr10 22138757 22138798 -118177967 + A-rich Low_complexity Low_complexity 1 41 0 2619 103 24 2 chr10 22140181 22140590 -118176175 + L1MA1 LINE L1 5885 6302 0 254 243 14 0 chr10 22140846 22140916 -118175849 - MER63A DNA MER1_type 0 210 140 34 24 0 0 chr10 22140939 22140980 -118175785 + AT_rich Low_complexity Low_complexity 1 41 0 235 209 0 0 chr10 22140980 22141023 -118175742 - MER63A DNA MER1_type -167 43 1 313 262 270 0 chr10 22141383 22141509 -118175256 + MIR SINE MIR 77 236 -26 40 37 0 0 chr10 22142263 22142317 -118174448 + AT_rich Low_complexity Low_complexity 1 54 0 691 188 27 27 chr10 22142523 22142672 -118174093 + MER33 DNA MER1_type 1 149 -175 203 310 69 23 chr10 22142741 22142828 -118173937 + L2 LINE L2 3210 3300 -13 25 65 0 0 chr10 22143080 22143126 -118173639 + AT_rich Low_complexity Low_complexity 1 46 0 1984 114 82 17 chr10 22143971 22144323 -118172442 + THE1C LTR MaLR 1 375 0 660 199 75 0 chr10 22145152 22145338 -118171427 - LTR37A LTR ERV1 -2 424 225 777 152 85 12 chr10 22145388 22145553 -118171212 + MER44D DNA MER2_type 1 447 -162 4627 133 21 9 chr10 22145579 22146391 -118170374 - L1PB3 LINE L1 -2 6152 5331 852 140 13 20 chr10 22146391 22146541 -118170224 + MER44D DNA MER2_type 456 604 -1 410 211 73 9 chr10 22146544 22146653 -118170112 - LTR37A LTR ERV1 -259 167 52 2426 60 0 13 chr10 22147178 22147476 -118169289 - AluY SINE Alu -17 294 1 21 0 0 0 chr10 22147615 22147636 -118169129 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr10 22148892 22148912 -118167853 + (A)n Simple_repeat Simple_repeat 1 20 0 2124 126 134 11 chr10 22149030 22149411 -118167354 + MSTA LTR MaLR 1 428 0 982 47 78 0 chr10 22150133 22150261 -118166504 + MER85 DNA T2_type 2 139 0 218 371 0 0 chr10 22151667 22151756 -118165009 + C-rich Low_complexity Low_complexity 1 89 0 1987 154 0 19 chr10 22152287 22152599 -118164166 - AluJo SINE Alu -6 306 1 634 318 32 12 chr10 22153487 22153739 -118163026 - MIR SINE MIR 0 262 6 396 0 0 0 chr10 22154400 22154444 -118162321 + (T)n Simple_repeat Simple_repeat 1 44 0 189 0 0 0 chr10 22154714 22154735 -118162030 + (TGAG)n Simple_repeat Simple_repeat 1 21 0 490 274 108 32 chr10 22155256 22155488 -118161277 + MIR SINE MIR 1 249 -13 2759 115 11 29 chr10 22156928 22157370 -118159395 + Tigger2a DNA MER2_type 1 434 0 261 301 16 41 chr10 22158358 22158481 -118158284 + MLT1G1 LTR MaLR 460 579 -16 2529 57 0 19 chr10 22158833 22159150 -118157615 + AluY SINE Alu 1 311 0 810 302 56 57 chr10 22159157 22159697 -118157068 - LTR67 LTR ERVL -18 539 1 2357 149 50 38 chr10 22159811 22160306 -118156459 + L1PA16 LINE L1 5666 6166 0 1773 169 35 12 chr10 22161277 22161621 -118155144 - MLT1A1 LTR MaLR 0 365 14 1250 226 148 2 chr10 22161649 22162074 -118154691 - Charlie4a DNA MER1_type 0 508 22 367 261 114 44 chr10 22162192 22162552 -118154213 - L1M4 LINE L1 -1283 4863 4479 370 214 12 24 chr10 22162933 22163017 -118153748 - L2 LINE L2 -2 3311 3229 * 2183 273 138 8 chr10 22163001 22163850 -118152915 - L2 LINE L2 -1295 2019 1061 376 167 62 21 chr10 22163853 22163949 -118152816 - L1M4 LINE L1 -1541 4605 4506 380 283 102 17 chr10 22163951 22164128 -118152637 - L2 LINE L2 -2259 1055 864 406 307 270 10 chr10 22164275 22164686 -118152079 - L2 LINE L2 -2447 867 350 24 32 0 0 chr10 22166216 22166247 -118150518 + AT_rich Low_complexity Low_complexity 1 31 0 3502 135 9 8 chr10 22166671 22167196 -118149569 - MER1A DNA MER1_type -1 526 1 210 397 0 13 chr10 22168678 22168756 -118148009 - MIR3 SINE MIR -8 200 124 633 280 134 22 chr10 22169932 22170336 -118146429 - MLT1K LTR MaLR 0 588 140 735 169 0 0 chr10 22170824 22170942 -118145823 + FLAM_C SINE Alu 1 118 -15 1317 203 68 15 chr10 22171923 22172189 -118144576 + AluJo SINE Alu 3 282 -30 784 143 0 0 chr10 22172657 22172776 -118143989 - FLAM_C SINE Alu -22 121 3 1787 167 14 7 chr10 22173145 22173439 -118143326 - AluJo SINE Alu -16 296 1 180 0 0 0 chr10 22174332 22174352 -118142413 + (TCC)n Simple_repeat Simple_repeat 3 22 0 3485 142 10 3 chr10 22174975 22175560 -118141205 - L1PA16 LINE L1 0 6166 5578 2159 106 13 23 chr10 22175560 22175862 -118140903 - AluSx SINE Alu -13 299 1 23 33 0 0 chr10 22177328 22177358 -118139407 + AT_rich Low_complexity Low_complexity 1 30 0 1782 187 26 10 chr10 22177366 22177671 -118139094 + AluJb SINE Alu 1 310 -2 333 267 22 74 chr10 22177717 22177852 -118138913 + MIR SINE MIR 5 132 -130 269 333 27 9 chr10 22178356 22178367 -118138398 + MIR SINE MIR 137 146 -116 1627 189 3 20 chr10 22178367 22178673 -118138092 + AluJo SINE Alu 3 303 -9 269 333 27 9 chr10 22178673 22178772 -118137993 + MIR SINE MIR 146 249 -13 2349 93 0 19 chr10 22179140 22179452 -118137313 - AluSc SINE Alu -3 306 1 2470 73 0 0 chr10 22180002 22180302 -118136463 + AluY SINE Alu 1 300 -11 1421 12 0 0 chr10 22180305 22180467 -118136298 + L1PA2 LINE L1 5992 6153 -2 24 32 0 0 chr10 22180501 22180532 -118136233 + AT_rich Low_complexity Low_complexity 1 31 0 1934 135 10 43 chr10 22181254 22181558 -118135207 - AluJb SINE Alu -18 294 1 724 279 90 9 chr10 22181784 22182006 -118134759 - MIR SINE MIR -20 242 3 2198 138 3 0 chr10 22182070 22182381 -118134384 + AluSx SINE Alu 1 312 0 24 32 0 0 chr10 22182416 22182447 -118134318 + AT_rich Low_complexity Low_complexity 1 31 0 30 59 0 0 chr10 22182590 22182641 -118134124 + AT_rich Low_complexity Low_complexity 1 51 0 1652 184 0 20 chr10 22183399 22183692 -118133073 - AluJo SINE Alu -25 287 1 2230 112 0 0 chr10 22184274 22184569 -118132196 - AluSx SINE Alu -17 295 1 358 239 194 0 chr10 22184591 22184725 -118132040 - L1ME2 LINE L1 -280 5884 5725 1037 277 95 25 chr10 22186161 22186804 -118129961 + L2 LINE L2 2628 3312 -1 405 294 69 0 chr10 22187009 22187169 -118129596 - MLT1K LTR MaLR -64 524 354 2045 137 105 3 chr10 22187228 22187608 -118129157 + MSTB1 LTR MaLR 1 419 -13 748 167 0 36 chr10 22188217 22188355 -118128410 + FLAM_C SINE Alu 1 133 0 396 0 0 0 chr10 22188867 22188911 -118127854 + (TG)n Simple_repeat Simple_repeat 2 45 0 501 262 93 46 chr10 22189775 22190012 -118126753 - MIR SINE MIR -1 261 14 337 234 18 0 chr10 22191170 22191281 -118125484 + (TA)n Simple_repeat Simple_repeat 2 114 0 318 336 48 73 chr10 22196094 22196424 -118120341 + L2 LINE L2 2580 2901 -413 1847 108 62 56 chr10 22197093 22197434 -118119331 + MER61A LTR ERV1 1 343 0 180 284 86 12 chr10 22197486 22197567 -118119198 + L2 LINE L2 3182 3268 -45 219 69 0 0 chr10 22197860 22197889 -118118876 + (T)n Simple_repeat Simple_repeat 1 29 0 275 363 10 0 chr10 22197966 22198068 -118118697 + L2 LINE L2 3170 3272 0 198 0 0 0 chr10 22198386 22198408 -118118357 + (A)n Simple_repeat Simple_repeat 1 22 0 1343 171 65 85 chr10 22198416 22198814 -118117951 - MLT1B LTR MaLR 0 390 1 2240 136 0 0 chr10 22198947 22199288 -118117477 - AluSx SINE Alu 0 345 5 2210 127 0 0 chr10 22199452 22199760 -118117005 - AluSx SINE Alu -4 308 1 794 168 0 29 chr10 22200790 22200927 -118115838 - FLAM_C SINE Alu 0 133 1 296 295 108 29 chr10 22201647 22201786 -118114979 - L2 LINE L2 -2 3270 3121 2242 82 0 7 chr10 22202440 22202743 -118114022 - L1PA8 LINE L1 -4 6168 5868 491 56 0 0 chr10 22202743 22202814 -118113951 + L1P LINE L1 4126 4196 -1950 802 125 307 6 chr10 22203816 22203992 -118112773 - MER30 DNA MER1_type -1 229 1 324 0 0 0 chr10 22204197 22204233 -118112532 + (TG)n Simple_repeat Simple_repeat 1 36 0 1508 162 0 12 chr10 22205223 22205464 -118111301 + AluSg/x SINE Alu 72 309 -1 489 305 84 28 chr10 22205853 22206088 -118110677 - MIR SINE MIR -1 261 14 215 286 25 84 chr10 22206604 22206723 -118110042 - L2 LINE L2 -182 3090 2979 38 18 0 18 chr10 22207463 22207496 -118109269 + AT_rich Low_complexity Low_complexity 1 34 -21 2044 126 0 3 chr10 22207496 22207798 -118108967 - AluSq SINE Alu -12 301 1 38 18 0 18 chr10 22207798 22207820 -118108945 + AT_rich Low_complexity Low_complexity 34 55 0 41242 46 2 1 chr10 22208312 22214460 -118102305 - L1PA4 LINE L1 0 6155 1 267 269 103 0 chr10 22215633 22215711 -118101054 + MIR SINE MIR 104 189 -73 323 310 62 16 chr10 22216779 22216908 -118099857 + L2 LINE L2 3137 3271 -1 725 306 65 32 chr10 22217106 22217537 -118099228 - MLT1J2 LTR MaLR 0 450 6 2193 119 0 13 chr10 22218159 22218462 -118098303 - AluSx SINE Alu -13 299 1 2926 63 0 11 chr10 22219323 22219703 -118097062 - L1PA8 LINE L1 -13 6159 5784 427 326 23 19 chr10 22219747 22219962 -118096803 - L2 LINE L2 -718 2596 2381 1290 323 145 13 chr10 22221222 22221972 -118094793 - L2 LINE L2 -348 2966 2118 2114 118 34 55 chr10 22221985 22222366 -118094399 - L1PB4 LINE L1 -2 6154 5782 183 42 0 0 chr10 22222635 22222659 -118094106 + (TA)n Simple_repeat Simple_repeat 2 25 0 1161 109 3 6 chr10 22222663 22222864 -118093901 - L1PB4 LINE L1 -376 5780 5577 753 254 52 86 chr10 22222933 22223319 -118093446 - L2 LINE L2 -1479 1835 1463 489 226 0 0 chr10 22223552 22223654 -118093111 + Charlie5 DNA MER1_type 5 106 -2506 1041 156 171 27 chr10 22223662 22223996 -118092769 + Charlie5 DNA MER1_type 2234 2615 0 400 256 72 8 chr10 22224092 22224217 -118092548 - MIR SINE MIR -126 136 4 22 35 0 0 chr10 22224608 22224637 -118092128 + AT_rich Low_complexity Low_complexity 1 29 0 250 290 134 46 chr10 22224661 22224899 -118091866 + L2 LINE L2 2315 2573 -741 225 0 0 0 chr10 22227475 22227500 -118089265 + (T)n Simple_repeat Simple_repeat 1 25 0 622 226 226 0 chr10 22227629 22227806 -118088959 - MER20 DNA MER1_type 0 219 3 2239 100 37 7 chr10 22228217 22228517 -118088248 - AluSc SINE Alu 0 309 1 1972 158 7 0 chr10 22228547 22228857 -118087908 + AluJb SINE Alu 1 312 0 448 291 61 27 chr10 22229284 22229432 -118087333 + L3b LINE CR1 1415 1567 -16 220 263 42 111 chr10 22229581 22229771 -118086994 - MIR SINE MIR -66 196 20 251 282 0 24 chr10 22229977 22230062 -118086703 + (TATG)n Simple_repeat Simple_repeat 1 83 0 660 199 75 0 chr10 22231383 22231569 -118085196 - LTR37A LTR ERV1 -2 424 225 777 152 85 12 chr10 22231619 22231784 -118084981 + MER44D DNA MER2_type 1 447 -162 4627 133 21 9 chr10 22231810 22232622 -118084143 - L1PB3 LINE L1 -2 6152 5331 852 140 13 20 chr10 22232622 22232772 -118083993 + MER44D DNA MER2_type 456 604 -1 410 211 73 9 chr10 22232775 22232884 -118083881 - LTR37A LTR ERV1 -259 167 52 2426 60 0 13 chr10 22233409 22233707 -118083058 - AluY SINE Alu -17 294 1 28 29 0 0 chr10 22234274 22234309 -118082456 + AT_rich Low_complexity Low_complexity 1 35 0 2190 79 3 51 chr10 22234791 22234959 -118081806 - AluSg SINE Alu -10 300 152 2060 116 3 67 chr10 22234959 22235287 -118081478 - AluSx SINE Alu -5 307 1 2190 79 3 51 chr10 22235287 22235433 -118081332 - AluSg SINE Alu -158 152 1 185 325 145 0 chr10 22235482 22235565 -118081200 - MIR SINE MIR -130 132 38 323 224 132 0 chr10 22236044 22236120 -118080645 + L2 LINE L2 3186 3271 -1 286 329 74 20 chr10 22236134 22236283 -118080482 + MIR3 SINE MIR 50 206 -2 207 114 0 0 chr10 22237044 22237079 -118079686 + (ATTAG)n Simple_repeat Simple_repeat 4 38 0 380 261 7 43 chr10 22237096 22237234 -118079531 + MER103 DNA DNA 23 155 -11 28 0 0 0 chr10 22238587 22238615 -118078150 + AT_rich Low_complexity Low_complexity 1 28 0 216 255 0 0 chr10 22238649 22238700 -118078065 + GA-rich Low_complexity Low_complexity 3 53 0 326 298 101 38 chr10 22238928 22239086 -118077679 - MIR3 SINE MIR -11 197 30 327 49 0 0 chr10 22239311 22239352 -118077413 + (TA)n Simple_repeat Simple_repeat 1 41 0 372 261 292 5 chr10 22239796 22239991 -118076774 + MIR SINE MIR 12 262 0 180 111 0 0 chr10 22240228 22240255 -118076510 + (CAA)n Simple_repeat Simple_repeat 3 29 0 364 283 15 4 chr10 22240305 22240432 -118076333 - MIR SINE MIR -63 145 43 2348 63 0 47 chr10 22240878 22241196 -118075569 - AluY SINE Alu -8 303 1 1675 191 7 10 chr10 22241288 22241640 -118075125 - AluJb SINE Alu 0 351 1 261 295 6 90 chr10 22241666 22241822 -118074943 - L3 LINE CR1 -406 1171 1029 180 254 79 95 chr10 22242107 22242233 -118074532 - L3 LINE CR1 -864 713 590 313 209 110 68 chr10 22243255 22243446 -118073319 - MLT1J LTR MaLR 0 511 313 1797 180 7 0 chr10 22248112 22248417 -118068348 + AluJb SINE Alu 1 307 -5 403 306 9 0 chr10 22248808 22248916 -118067849 + L2 LINE L2 3201 3309 -4 829 233 60 23 chr10 22249012 22249227 -118067538 - MIR SINE MIR -37 225 3 2114 112 0 20 chr10 22249289 22249584 -118067181 - AluSx SINE Alu -19 293 5 1003 50 14 50 chr10 22249639 22249780 -118066985 - L1PA10 LINE L1 -8 6160 6025 297 278 104 26 chr10 22250948 22251063 -118065702 + L3 LINE CR1 1386 1509 -68 813 152 0 0 chr10 22251452 22251577 -118065188 + FLAM_C SINE Alu 1 125 -8 353 331 211 20 chr10 22252432 22253033 -118063732 + L3 LINE CR1 760 1475 -102 331 279 125 0 chr10 22253244 22253348 -118063417 - L2 LINE L2 0 3272 3156 26 0 0 0 chr10 22253366 22253392 -118063373 + AT_rich Low_complexity Low_complexity 1 26 0 499 207 35 12 chr10 22253472 22253641 -118063124 + CT-rich Low_complexity Low_complexity 2 174 0 957 198 202 4 chr10 22253645 22253897 -118062868 - AluJo SINE Alu 0 302 1 326 218 128 0 chr10 22254061 22254139 -118062626 - L2 LINE L2 0 3272 3185 185 309 49 25 chr10 22255202 22255283 -118061482 - L2 LINE L2 -16 3256 3174 2145 120 0 0 chr10 22255449 22255748 -118061017 - AluSg1 SINE Alu -10 299 1 310 266 203 16 chr10 22256473 22256601 -118060164 - MIR SINE MIR -1 261 110 2988 167 14 61 chr10 22257796 22258438 -118058327 - LTR9 LTR ERV1 0 612 1 580 293 47 16 chr10 22258456 22258647 -118058118 + MIR SINE MIR 28 224 -38 22 35 0 0 chr10 22259717 22259746 -118057019 + AT_rich Low_complexity Low_complexity 1 29 0 297 0 0 0 chr10 22260077 22260110 -118056655 + (GCTG)n Simple_repeat Simple_repeat 2 34 0 425 299 16 16 chr10 22260331 22260458 -118056307 - MLT2E LTR ERVL -472 156 30 2035 152 3 3 chr10 22260790 22261093 -118055672 + AluSx SINE Alu 1 303 -9 721 294 112 42 chr10 22261109 22261581 -118055184 - MLT1K LTR MaLR -7 581 77 328 255 27 34 chr10 22261936 22262085 -118054680 + L1M4 LINE L1 4498 4645 -1501 212 167 21 0 chr10 22262317 22262365 -118054400 + CT-rich Low_complexity Low_complexity 3 51 0 3987 89 11 2 chr10 22262750 22263299 -118053466 - MER41A LTR ERV1 0 554 1 260 303 28 49 chr10 22264453 22264595 -118052170 + MER5A DNA MER1_type 23 161 -28 2210 116 3 0 chr10 22265483 22265784 -118050981 - AluSx SINE Alu -10 302 1 279 0 0 0 chr10 22267487 22267518 -118049247 + (CA)n Simple_repeat Simple_repeat 2 32 0 672 323 30 31 chr10 22267608 22268211 -118048554 + L1ME LINE L1 4456 5057 -1089 21 0 0 0 chr10 22268793 22268814 -118047951 + AT_rich Low_complexity Low_complexity 1 21 0 290 291 23 46 chr10 22268918 22269093 -118047672 + L1ME LINE L1 5296 5466 -696 1047 175 0 5 chr10 22269423 22269617 -118047148 - L1MB3 LINE L1 -1 6182 5990 1013 250 9 22 chr10 22270323 22270551 -118046214 + MIR SINE MIR 12 236 -26 215 327 183 27 chr10 22271865 22272128 -118044637 + L2 LINE L2 2941 3244 -69 638 87 0 48 chr10 22272841 22272944 -118043821 + L1MA2 LINE L1 6207 6304 0 22 0 0 0 chr10 22272944 22272966 -118043799 + AT_rich Low_complexity Low_complexity 1 22 0 1927 197 20 0 chr10 22273642 22273993 -118042772 + MER47A DNA MER2_type 2 359 -7 2129 87 0 7 chr10 22274350 22274627 -118042138 + AluY SINE Alu 1 275 -36 213 39 0 0 chr10 22275241 22275267 -118041498 + (T)n Simple_repeat Simple_repeat 1 26 0 23 33 0 0 chr10 22276260 22276290 -118040475 + AT_rich Low_complexity Low_complexity 1 30 0 190 226 179 24 chr10 22276423 22276507 -118040258 + MIR SINE MIR 152 248 -14 728 260 113 17 chr10 22276814 22277045 -118039720 + MIR SINE MIR 8 260 -2 187 323 46 0 chr10 22278374 22278439 -118038326 - L2 LINE L2 -19 3253 3186 1817 142 53 0 chr10 22278706 22278987 -118037778 + AluSq SINE Alu 1 296 -17 40 0 0 0 chr10 22278994 22279034 -118037731 + AT_rich Low_complexity Low_complexity 1 40 0 183 42 0 0 chr10 22280294 22280318 -118036447 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2081 93 7 27 chr10 22280586 22280886 -118035879 - AluSc SINE Alu -15 294 1 1947 162 3 0 chr10 22280964 22281267 -118035498 + AluJo SINE Alu 1 304 -8 22 0 0 0 chr10 22281760 22281782 -118034983 + AT_rich Low_complexity Low_complexity 1 22 0 1833 176 11 11 chr10 22281786 22282138 -118034627 - L1MA3 LINE L1 0 6305 5954 552 178 0 0 chr10 22282138 22282228 -118034537 - AluJo SINE Alu -127 185 96 1529 75 0 0 chr10 22282228 22282429 -118034336 - L1MA3 LINE L1 -370 5935 5735 180 217 0 0 chr10 22282747 22282793 -118033972 + T-rich Low_complexity Low_complexity 4 49 0 1153 242 114 31 chr10 22283750 22284035 -118032730 - Charlie2 DNA MER1_type -28 2834 2574 2211 90 0 37 chr10 22284035 22284335 -118032430 - AluSg SINE Alu -21 289 1 1153 242 114 31 chr10 22284335 22284603 -118032162 - Charlie2 DNA MER1_type -288 2574 2235 540 207 36 21 chr10 22284637 22284777 -118031988 - Charlie2a DNA MER1_type -1808 1054 913 386 289 56 41 chr10 22285509 22285706 -118031059 + MIR3 SINE MIR 8 207 -1 358 330 0 0 chr10 22285839 22285939 -118030826 - MIR SINE MIR -6 256 157 1824 175 25 28 chr10 22286061 22286456 -118030309 - MSTD LTR MaLR 0 396 3 2026 144 6 54 chr10 22287022 22287376 -118029389 - MER1B DNA MER1_type 0 337 1 1674 95 4 4 chr10 22287810 22288053 -118028712 - MER75B DNA T2_type 0 243 1 21 0 0 0 chr10 22288645 22288666 -118028099 + AT_rich Low_complexity Low_complexity 1 21 0 224 165 68 29 chr10 22291401 22291504 -118025261 + (TA)n Simple_repeat Simple_repeat 2 108 0 1737 148 62 3 chr10 22291816 22292140 -118024625 + L1MA5 LINE L1 5958 6300 0 1537 245 33 6 chr10 22292460 22292823 -118023942 - MLT1A2 LTR MaLR 0 374 2 1914 169 54 3 chr10 22292830 22293221 -118023544 + L1MA7 LINE L1 5869 6279 -12 21 36 0 0 chr10 22293232 22293260 -118023505 + AT_rich Low_complexity Low_complexity 1 28 0 210 370 9 9 chr10 22293482 22293590 -118023175 - MIR SINE MIR -64 144 37 517 246 152 16 chr10 22293988 22294179 -118022586 + MLT1K LTR MaLR 360 576 -12 249 108 0 0 chr10 22294181 22294218 -118022547 + (CAT)n Simple_repeat Simple_repeat 1 37 0 243 146 0 0 chr10 22295701 22295742 -118021023 + (ATG)n Simple_repeat Simple_repeat 1 41 0 751 315 94 26 chr10 22295744 22296128 -118020637 - MLT1K LTR MaLR -12 576 167 11247 118 25 11 chr10 22296782 22298939 -118017826 - Tigger1 DNA MER2_type 0 2418 294 2212 143 6 3 chr10 22298939 22299281 -118017484 - MER61A LTR ERV1 0 343 1 11247 118 25 11 chr10 22299281 22299306 -118017459 - Tigger1 DNA MER2_type -2124 294 271 2191 103 7 0 chr10 22299306 22299598 -118017167 + AluSx SINE Alu 1 294 -18 11247 118 25 11 chr10 22299598 22299791 -118016974 - Tigger1 DNA MER2_type -2147 271 1 313 206 137 0 chr10 22299792 22299865 -118016900 - MIR SINE MIR -109 153 71 245 163 0 0 chr10 22301331 22301374 -118015391 - MLT1L LTR MaLR -428 187 145 272 271 336 11 chr10 22301777 22302039 -118014726 + L2 LINE L2 2316 2662 -652 840 65 0 0 chr10 22302047 22302154 -118014611 - AluY SINE Alu -4 307 201 254 327 29 29 chr10 22302162 22302266 -118014499 + L2 LINE L2 2670 2773 -541 265 220 0 0 chr10 22302538 22302588 -118014177 + MLT1I LTR MaLR 94 143 -266 322 143 0 32 chr10 22302647 22302710 -118014055 + MLT1F1 LTR MaLR 507 567 0 230 271 79 57 chr10 22303342 22303482 -118013283 - MLT1K LTR MaLR -5 583 441 809 104 0 37 chr10 22304893 22305027 -118011738 - FRAM SINE Alu -2 174 46 3380 18 0 0 chr10 22306232 22306617 -118010148 - L1PA3 LINE L1 -3 6152 5768 624 296 188 0 chr10 22306619 22306832 -118009933 + MIR SINE MIR 3 255 -7 192 135 0 0 chr10 22307026 22307063 -118009702 + (TC)n Simple_repeat Simple_repeat 2 38 0 249 139 0 0 chr10 22307096 22307139 -118009626 + (TCCC)n Simple_repeat Simple_repeat 3 45 0 3349 73 4 0 chr10 22307738 22308192 -118008573 - L1PA13 LINE L1 -1 6162 5707 2041 120 10 33 chr10 22310149 22310449 -118006316 - AluSx SINE Alu -14 298 6 1125 157 25 5 chr10 22312842 22313040 -118003725 + L1PB4 LINE L1 5954 6155 -1 353 182 13 57 chr10 22313107 22313266 -118003499 + (TA)n Simple_repeat Simple_repeat 1 152 0 265 255 0 11 chr10 22313377 22313456 -118003309 + (TA)n Simple_repeat Simple_repeat 2 81 -13 192 97 0 0 chr10 22313456 22313487 -118003278 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 265 255 0 11 chr10 22313487 22313501 -118003264 + (TA)n Simple_repeat Simple_repeat 81 94 0 226 225 141 14 chr10 22313692 22313763 -118003002 - MIR SINE MIR -1 261 182 406 233 53 48 chr10 22314180 22314386 -118002379 - MER113 DNA MER1_type? -309 212 6 249 341 59 30 chr10 22314401 22314536 -118002229 + MIR3 SINE MIR 8 146 -62 2178 133 3 0 chr10 22314976 22315285 -118001480 - AluSx SINE Alu -2 310 1 24 0 0 0 chr10 22315741 22315765 -118001000 + AT_rich Low_complexity Low_complexity 1 24 0 952 162 0 0 chr10 22315943 22316091 -118000674 + AluJb SINE Alu 140 287 -25 180 0 0 0 chr10 22316094 22316114 -118000651 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1789 112 35 14 chr10 22316475 22316761 -118000004 + L1PA13 LINE L1 5859 6150 -13 293 375 50 0 chr10 22317049 22317169 -117999596 - L2 LINE L2 -1 3271 3146 234 230 163 96 chr10 22317382 22317560 -117999205 - MIR SINE MIR -21 241 52 1813 160 45 0 chr10 22318442 22318729 -117998036 - AluSx SINE Alu -10 302 3 1850 168 3 0 chr10 22319761 22320053 -117996712 + AluJb SINE Alu 1 293 -19 327 49 0 0 chr10 22321188 22321229 -117995536 + (TG)n Simple_repeat Simple_repeat 2 42 0 1300 201 42 50 chr10 22321229 22321512 -117995253 - AluJo SINE Alu -18 284 4 492 195 47 8 chr10 22322260 22322388 -117994377 - L1MB7 LINE L1 0 6184 6052 26 30 0 0 chr10 22322549 22322582 -117994183 + AT_rich Low_complexity Low_complexity 1 33 0 33 25 0 0 chr10 22322625 22322665 -117994100 + AT_rich Low_complexity Low_complexity 1 40 0 1463 49 6 0 chr10 22323324 22323507 -117993258 + L1PA5 LINE L1 5971 6154 0 191 254 0 36 chr10 22324438 22324493 -117992272 + L2 LINE L2 2757 2809 -505 693 189 172 18 chr10 22324836 22325005 -117991760 + MIR SINE MIR 63 257 -5 23 0 0 0 chr10 22327747 22327770 -117988995 + AT_rich Low_complexity Low_complexity 1 23 0 1780 154 11 3 chr10 22328499 22328785 -117987980 - AluSx SINE Alu -24 288 1 410 294 25 103 chr10 22329047 22329407 -117987358 - L2 LINE L2 0 3272 2941 2164 128 0 0 chr10 22329962 22330258 -117986507 - AluSx SINE Alu -16 296 1 1489 289 51 46 chr10 22330521 22331225 -117985540 + L2 LINE L2 2287 2992 -321 569 290 159 12 chr10 22331540 22331792 -117984973 + L2 LINE L2 3024 3312 -1 34 24 0 0 chr10 22331830 22331871 -117984894 + AT_rich Low_complexity Low_complexity 1 41 0 234 0 0 0 chr10 22331990 22332016 -117984749 + (TA)n Simple_repeat Simple_repeat 2 27 0 1563 121 12 0 chr10 22332428 22332677 -117984088 - L1MA5A LINE L1 -6 6291 6040 192 343 48 19 chr10 22332786 22332891 -117983874 + MIR SINE MIR 30 137 -71 243 368 140 0 chr10 22334147 22334261 -117982504 - L2 LINE L2 -6 3307 3178 1908 146 54 0 chr10 22334332 22334626 -117982139 + AluSx SINE Alu 1 310 -2 3014 202 39 44 chr10 22335216 22335879 -117980886 + L1MA9 LINE L1 5514 6174 -138 225 0 0 0 chr10 22335879 22335904 -117980861 + (CA)n Simple_repeat Simple_repeat 1 25 0 3014 202 39 44 chr10 22335904 22336013 -117980752 + L1MA9 LINE L1 6174 6282 -30 1874 152 0 0 chr10 22336390 22336673 -117980092 + AluSx SINE Alu 18 300 -12 1432 184 10 30 chr10 22337702 22338006 -117978759 - AluJo SINE Alu -9 303 6 2164 102 16 16 chr10 22339434 22339747 -117977018 - AluSq SINE Alu 0 313 1 182 114 0 29 chr10 22340247 22340282 -117976483 + (CA)n Simple_repeat Simple_repeat 2 35 0 300 338 90 8 chr10 22340778 22340911 -117975854 + MIR SINE MIR 4 147 -115 376 172 75 0 chr10 22341236 22341329 -117975436 + L1MB4 LINE L1 6078 6177 -3 1961 159 0 6 chr10 22341973 22342287 -117974478 + AluJb SINE Alu 1 312 0 2138 119 7 10 chr10 22343006 22343309 -117973456 - AluSq SINE Alu -11 302 1 273 119 0 0 chr10 22343663 22343705 -117973060 + (T)n Simple_repeat Simple_repeat 1 42 0 224 294 98 29 chr10 22343842 22343944 -117972821 + MIR SINE MIR 110 218 -44 1561 199 34 0 chr10 22344140 22344436 -117972329 + AluJo SINE Alu 6 311 -1 2170 103 10 3 chr10 22345198 22345498 -117971267 - AluSx SINE Alu 0 312 11 229 156 0 0 chr10 22345848 22345893 -117970872 + LTR66 LTR ERVL 394 438 -172 285 190 0 25 chr10 22345896 22345975 -117970790 + L1MC4 LINE L1 6624 6700 -1342 1520 187 21 21 chr10 22345978 22346262 -117970503 - AluJo SINE Alu -27 285 2 21 0 0 0 chr10 22346524 22346545 -117970220 + AT_rich Low_complexity Low_complexity 1 21 0 231 242 16 0 chr10 22346832 22346894 -117969871 - MIR SINE MIR -12 250 188 207 406 28 0 chr10 22349072 22349178 -117967587 - L3 LINE CR1 -19 1558 1450 1920 128 34 52 chr10 22356272 22356654 -117960111 + THE1C LTR MaLR 1 375 0 1425 189 91 8 chr10 22357846 22358111 -117958654 - AluJo SINE Alu -25 287 1 196 313 0 16 chr10 22358638 22358702 -117958063 - L2 LINE L2 0 3272 3210 1926 151 3 16 chr10 22361896 22362207 -117954558 - AluJo SINE Alu -5 307 1 1971 94 28 0 chr10 22362517 22362803 -117953962 + L1PB1 LINE L1 5856 6149 -2 331 265 102 20 chr10 22362830 22363026 -117953739 - L1ME LINE L1 -410 5711 5500 526 264 0 0 chr10 22363125 22363254 -117953511 - L1ME LINE L1 -505 5616 5488 2150 194 14 14 chr10 22363386 22363808 -117952957 - MSTB LTR MaLR -4 422 1 1663 155 47 6 chr10 22363947 22364264 -117952501 - MLT1B LTR MaLR -60 330 1 2378 154 32 11 chr10 22364265 22364701 -117952064 - MER65A LTR ERV1 0 445 1 1716 158 7 7 chr10 22364735 22365014 -117951751 + AluSx SINE Alu 29 307 -5 415 264 50 43 chr10 22365114 22365254 -117951511 - MIR3 SINE MIR -65 143 3 232 260 40 110 chr10 22366215 22366315 -117950450 + L2 LINE L2 3202 3294 -19 775 360 61 32 chr10 22368422 22368947 -117947818 + L3 LINE CR1 7 546 -1031 351 261 78 9 chr10 22369292 22369522 -117947243 + L1M4 LINE L1 4397 4642 -1504 3124 209 44 27 chr10 22369884 22370259 -117946506 - L1MD1 LINE L1 0 6242 5875 828 217 19 0 chr10 22370259 22370420 -117946345 - FRAM SINE Alu -2 164 1 3124 209 44 27 chr10 22370420 22371719 -117945046 - L1MD1 LINE L1 -367 5875 4516 2242 250 56 7 chr10 22371721 22372489 -117944276 - L1MD1 LINE L1 -1794 4352 3547 212 337 61 10 chr10 22372584 22372682 -117944083 + L3 LINE CR1 678 780 -797 * 783 263 75 94 chr10 22372680 22373136 -117943629 + L2 LINE L2 2867 3313 0 2179 117 0 3 chr10 22373190 22373497 -117943268 + AluSc SINE Alu 1 306 -3 647 312 163 35 chr10 22373550 22374172 -117942593 - L2 LINE L2 -52 3261 2568 315 303 37 0 chr10 22374341 22374450 -117942315 + MIR SINE MIR 63 175 -87 611 306 65 25 chr10 22374454 22374810 -117941955 + MLT1J LTR MaLR 1 370 -141 317 361 19 0 chr10 22375099 22375207 -117941558 + L3 LINE CR1 1097 1206 -371 196 226 161 58 chr10 22376344 22376499 -117940266 + L2 LINE L2 3130 3300 -13 3783 163 75 27 chr10 22376507 22378086 -117938679 - L1MA8 LINE L1 -12 6279 4632 40900 32 22 1 chr10 22378134 22384194 -117932571 + L1PA2 LINE L1 2 6189 0 6367 163 38 12 chr10 22384223 22384525 -117932240 - L1MA8 LINE L1 -1518 4628 4335 1806 169 3 7 chr10 22384525 22384826 -117931939 - AluJb SINE Alu -12 300 1 6367 163 38 12 chr10 22384826 22385861 -117930904 - L1MA8 LINE L1 -1811 4335 3256 359 247 54 32 chr10 22386104 22386197 -117930568 + MIR SINE MIR 34 128 -134 443 334 13 5 chr10 22386847 22387032 -117929733 + MIR3 SINE MIR 15 200 -8 368 278 35 77 chr10 22387232 22387401 -117929364 + MLT1J LTR MaLR 258 419 -92 574 319 47 14 chr10 22388086 22388299 -117928466 + MIR SINE MIR 5 224 -38 2014 157 0 23 chr10 22388988 22389333 -117927432 - MER1B DNA MER1_type 0 337 1 211 237 105 26 chr10 22389471 22389547 -117927218 + MIR SINE MIR 181 262 0 231 339 150 0 chr10 22389548 22389675 -117927090 + L3b LINE CR1 1168 1313 -270 502 152 50 0 chr10 22390383 22390482 -117926283 - MER5A DNA MER1_type -77 112 9 2223 142 19 39 chr10 22392921 22393312 -117923453 + MER57A LTR ERV1 1 385 -18 2022 141 3 3 chr10 22393312 22393617 -117923148 - AluSx SINE Alu -7 305 1 2223 142 19 39 chr10 22393617 22393635 -117923130 + MER57A LTR ERV1 385 402 -1 195 381 39 35 chr10 22393664 22393895 -117922870 + L2 LINE L2 2828 3059 -213 2294 114 22 13 chr10 22394210 22394581 -117922184 - THE1B LTR MaLR 0 364 1 229 345 23 11 chr10 22394949 22395036 -117921729 - MIR SINE MIR -80 128 41 204 365 32 32 chr10 22395971 22396097 -117920668 - L2 LINE L2 -20 3293 3168 3194 143 55 74 chr10 22396274 22396978 -117919787 + LTR8 LTR ERV1 1 691 0 1154 225 171 7 chr10 22397047 22397487 -117919278 + L1M4 LINE L1 4382 4893 -1253 255 220 0 0 chr10 22397540 22397590 -117919175 - MIR SINE MIR -134 128 79 1926 162 42 0 chr10 22398446 22398779 -117917986 - MER7A DNA MER2_type -1 345 1 315 317 50 31 chr10 22398803 22398964 -117917801 - MIR3 SINE MIR -3 205 42 766 321 116 11 chr10 22400153 22400601 -117916164 + LTR33 LTR ERVL 5 499 -22 1732 144 3 75 chr10 22400720 22401039 -117915726 - AluSq SINE Alu -17 296 1 785 191 8 0 chr10 22401146 22401277 -117915488 - FLAM_A SINE Alu -1 132 1 2316 108 0 0 chr10 22402187 22402484 -117914281 + AluSc SINE Alu 1 297 -12 807 287 150 18 chr10 22403831 22404218 -117912547 - MLT1G3 LTR MaLR 0 530 93 990 204 58 64 chr10 22404235 22404563 -117912202 - L1M4 LINE L1 -5176 1366 1041 1032 214 0 5 chr10 22404563 22404750 -117912015 + AluJb SINE Alu 122 307 -5 3519 226 43 37 chr10 22404762 22405753 -117911012 - L1M4 LINE L1 -5544 998 2 * 4872 274 80 17 chr10 22405746 22407845 -117908920 - L1MEc LINE L1 -3991 2405 176 333 297 74 48 chr10 22408072 22408301 -117908464 - L2 LINE L2 0 3313 3079 327 377 27 27 chr10 22408816 22408962 -117907803 - L2 LINE L2 0 3272 3127 631 265 29 0 chr10 22409427 22409597 -117907168 - MER5B DNA MER1_type 0 178 4 1327 231 105 43 chr10 22409600 22410020 -117906745 + MLT2B1 LTR ERVL 1 446 -74 339 25 0 0 chr10 22410022 22410062 -117906703 + (CA)n Simple_repeat Simple_repeat 2 41 0 348 227 0 0 chr10 22411009 22411097 -117905668 + (CA)n Simple_repeat Simple_repeat 1 88 0 213 39 0 0 chr10 22411359 22411385 -117905380 + (CTTG)n Simple_repeat Simple_repeat 2 27 0 2023 145 0 7 chr10 22411385 22411671 -117905094 - AluSx SINE Alu -26 286 1 342 194 0 0 chr10 22412359 22412421 -117904344 - MLT1A2 LTR MaLR 0 374 313 1201 99 0 0 chr10 22412422 22412574 -117904191 - FRAM SINE Alu -3 173 22 216 200 0 0 chr10 22413923 22413968 -117902797 + GA-rich Low_complexity Low_complexity 2 46 0 182 329 0 43 chr10 22414125 22414195 -117902570 + MIR SINE MIR 74 140 -68 276 30 0 0 chr10 22414757 22414790 -117901975 + (TG)n Simple_repeat Simple_repeat 1 33 0 197 136 0 45 chr10 22416288 22416332 -117900433 + (GGGA)n Simple_repeat Simple_repeat 2 43 0 253 150 0 33 chr10 22416386 22416446 -117900319 + (GGGAA)n Simple_repeat Simple_repeat 4 61 0 615 234 0 0 chr10 22417891 22418175 -117898590 + (TG)n Simple_repeat Simple_repeat 1 284 0 444 264 0 0 chr10 22418196 22418370 -117898395 + (TG)n Simple_repeat Simple_repeat 2 175 0 190 218 36 55 chr10 22418535 22418590 -117898175 + MIR SINE MIR 91 144 -118 468 51 0 0 chr10 22419122 22419181 -117897584 + (TG)n Simple_repeat Simple_repeat 2 60 0 309 26 0 0 chr10 22421745 22421783 -117894982 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 636 164 0 0 chr10 22422208 22422385 -117894380 + (CA)n Simple_repeat Simple_repeat 2 178 0 321 293 6 19 chr10 22426104 22426261 -117890504 + CT-rich Low_complexity Low_complexity 1 155 0 276 30 0 0 chr10 22427879 22427912 -117888853 + (TG)n Simple_repeat Simple_repeat 1 33 0 204 115 19 39 chr10 22428352 22428404 -117888361 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 745 121 23 23 chr10 22428728 22428902 -117887863 + (TG)n Simple_repeat Simple_repeat 2 175 0 363 196 14 28 chr10 22428972 22429115 -117887650 + (TG)n Simple_repeat Simple_repeat 2 142 0 21 36 0 0 chr10 22429639 22429667 -117887098 + AT_rich Low_complexity Low_complexity 1 28 0 630 26 0 0 chr10 22432193 22432269 -117884496 + (TC)n Simple_repeat Simple_repeat 2 77 0 294 345 76 12 chr10 22433056 22433227 -117883538 + MLT1B LTR MaLR 1 182 -208 354 123 0 0 chr10 22433458 22433515 -117883250 + (CA)n Simple_repeat Simple_repeat 1 57 0 357 125 0 0 chr10 22434786 22434842 -117881923 + (CTG)n Simple_repeat Simple_repeat 1 56 0 357 221 95 11 chr10 22434888 22434983 -117881782 - AluSq/x SINE Alu -198 105 3 231 114 0 0 chr10 22437444 22437488 -117879277 + (TC)n Simple_repeat Simple_repeat 1 44 0 192 111 0 0 chr10 22437494 22437530 -117879235 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 333 0 0 0 chr10 22438590 22438627 -117878138 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 193 316 63 13 chr10 22438817 22438896 -117877869 + MIR SINE MIR 63 145 -117 5027 119 26 11 chr10 22439765 22440574 -117876191 + L1PA16 LINE L1 5337 6157 -9 47 19 0 0 chr10 22440574 22440628 -117876137 + AT_rich Low_complexity Low_complexity 1 54 0 2305 98 3 13 chr10 22440678 22440983 -117875782 + AluSx SINE Alu 1 302 -10 545 218 78 57 chr10 22441023 22441354 -117875411 + L1MEd LINE L1 771 1108 -5011 303 220 213 43 chr10 22442513 22442654 -117874111 - MIR3 SINE MIR -26 182 18 304 269 39 0 chr10 22443630 22443708 -117873057 + MIR SINE MIR 63 143 -119 22 70 0 0 chr10 22444477 22444520 -117872245 + GC_rich Low_complexity Low_complexity 1 43 0 211 313 0 0 chr10 22446118 22446166 -117870599 + polypyrimidine Low_complexity Low_complexity 1 48 0 405 0 0 0 chr10 22446589 22446634 -117870131 + (CA)n Simple_repeat Simple_repeat 2 46 0 248 295 21 11 chr10 22446801 22446896 -117869869 - MIR SINE MIR -107 155 60 1007 138 0 6 chr10 22447104 22447285 -117869480 + (TATG)n Simple_repeat Simple_repeat 1 180 0 232 261 76 34 chr10 22447301 22447420 -117869345 - AluSg SINE Alu -176 124 1 255 310 0 14 chr10 22449625 22449696 -117867069 - L2 LINE L2 -62 3251 3182 914 201 5 31 chr10 22449711 22449905 -117866860 + AluJo SINE Alu 124 312 0 2298 102 3 0 chr10 22450122 22450415 -117866350 - AluSx SINE Alu -18 294 1 270 325 0 0 chr10 22451322 22451338 -117865427 + AluSp SINE Alu 120 135 -168 1675 164 3 50 chr10 22451338 22451656 -117865109 + AluJo SINE Alu 1 303 -9 273 286 247 19 chr10 22452750 22452904 -117863861 + MIR3 SINE MIR 14 202 -6 1907 156 3 31 chr10 22453457 22453778 -117862987 + AluJo SINE Alu 1 312 0 227 145 58 0 chr10 22455058 22455127 -117861638 + (TA)n Simple_repeat Simple_repeat 1 73 0 1001 142 12 6 chr10 22455144 22455313 -117861452 - MER44D DNA MER2_type 0 705 536 1603 53 61 0 chr10 22455313 22455541 -117861224 - L1P5 LINE L1 -597 5554 5313 292 151 0 0 chr10 22455530 22455583 -117861182 + L1PB1 LINE L1 6095 6147 -4 * 930 131 95 12 chr10 22455600 22455768 -117860997 - MER44D DNA MER2_type -157 452 1 352 264 31 8 chr10 22455768 22455897 -117860868 + (TA)n Simple_repeat Simple_repeat 1 132 0 429 325 30 22 chr10 22457633 22457976 -117858789 + L1MC4a LINE L1 5561 5818 -303 32 43 0 0 chr10 22458230 22458276 -117858489 + AT_rich Low_complexity Low_complexity 1 46 0 1744 157 25 7 chr10 22458277 22458558 -117858207 - AluJo SINE Alu -26 286 1 305 219 96 102 chr10 22459132 22459278 -117857487 + MER5A DNA MER1_type 1 147 -42 2366 75 3 0 chr10 22459278 22459572 -117857193 - AluY SINE Alu -16 295 1 305 219 96 102 chr10 22459572 22459612 -117857153 + MER5A DNA MER1_type 147 186 -3 21 0 0 0 chr10 22459710 22459731 -117857034 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr10 22460987 22461007 -117855758 + (A)n Simple_repeat Simple_repeat 1 20 0 2152 133 128 8 chr10 22461125 22461507 -117855258 + MSTA LTR MaLR 1 428 0 982 47 78 0 chr10 22462230 22462358 -117854407 + MER85 DNA T2_type 2 139 0 1273 221 27 48 chr10 22464023 22464084 -117852681 - MLT1A1 LTR MaLR -2 363 302 2069 156 0 3 chr10 22464084 22464391 -117852374 - AluJo SINE Alu -6 306 1 1273 221 27 48 chr10 22464391 22464700 -117852065 - MLT1A1 LTR MaLR -63 302 1 366 342 12 0 chr10 22464711 22464872 -117851893 - L1ME LINE L1 -426 5744 5582 237 261 11 0 chr10 22464890 22464982 -117851783 - L1ME LINE L1 -2379 5429 5337 22 0 0 0 chr10 22464996 22465018 -117851747 + AT_rich Low_complexity Low_complexity 1 22 0 246 277 62 45 chr10 22465192 22465416 -117851349 - L1ME LINE L1 -2300 3846 3619 796 168 0 0 chr10 22465895 22466026 -117850739 + FLAM_C SINE Alu 3 133 0 201 39 0 0 chr10 22466040 22466066 -117850699 + (CAA)n Simple_repeat Simple_repeat 2 27 0 6236 53 8 0 chr10 22466326 22467167 -117849598 + L1P LINE L1 4492 5339 -807 474 262 78 48 chr10 22467287 22467528 -117849237 - L1ME LINE L1 -3324 2822 2590 1337 200 84 26 chr10 22467528 22467873 -117848892 + MLT1A1 LTR MaLR 1 365 0 474 262 78 48 chr10 22467873 22468180 -117848585 - L1ME LINE L1 -3556 2590 2252 2009 147 13 10 chr10 22468180 22468486 -117848279 - AluSx SINE Alu -5 307 1 474 262 78 48 chr10 22468486 22468524 -117848241 - L1ME LINE L1 -3894 2252 2217 663 252 143 47 chr10 22469203 22469837 -117846928 + HAL1 LINE L1 1672 2366 -141 341 179 45 8 chr10 22470314 22470448 -117846317 + CT-rich Low_complexity Low_complexity 3 141 0 360 0 0 0 chr10 22470648 22470688 -117846077 + (TTA)n Simple_repeat Simple_repeat 2 41 0 40900 34 23 1 chr10 22520782 22526419 -117790346 - L1P1 LINE L1 -389 5766 2 3129 178 27 0 chr10 22526467 22527124 -117789641 + L1MA8 LINE L1 4632 5306 -840 3517 162 87 45 chr10 22527297 22528222 -117788543 + L1MA8 LINE L1 5317 6279 -12 196 226 161 58 chr10 22528230 22528385 -117788380 - L2 LINE L2 -13 3300 3130 317 361 19 0 chr10 22529522 22529630 -117787135 - L3 LINE CR1 -371 1206 1097 611 306 65 25 chr10 22529919 22530275 -117786490 - MLT1J LTR MaLR -141 370 1 315 303 37 0 chr10 22530279 22530388 -117786377 - MIR SINE MIR -87 175 63 647 312 163 35 chr10 22530557 22531179 -117785586 + L2 LINE L2 2568 3261 -52 2179 117 0 3 chr10 22531232 22531539 -117785226 - AluSc SINE Alu -3 306 1 783 263 75 94 chr10 22531593 22532049 -117784716 - L2 LINE L2 0 3313 2867 212 337 61 10 chr10 22532047 22532145 -117784620 - L3 LINE CR1 -797 780 678 * 2242 250 56 7 chr10 22532240 22533008 -117783757 + L1MD1 LINE L1 3547 4352 -1794 3124 209 44 27 chr10 22533010 22534309 -117782456 + L1MD1 LINE L1 4516 5875 -367 828 217 19 0 chr10 22534309 22534470 -117782295 + FRAM SINE Alu 1 164 -2 3124 209 44 27 chr10 22534470 22534845 -117781920 + L1MD1 LINE L1 5875 6242 0 351 261 78 9 chr10 22535207 22535437 -117781328 - L1M4 LINE L1 -1504 4642 4397 330 292 32 52 chr10 22535834 22535988 -117780777 - L3 LINE CR1 -1083 494 344 550 356 84 25 chr10 22536173 22536566 -117780199 - L3 LINE CR1 -1155 422 7 232 260 40 110 chr10 22538673 22538773 -117777992 - L2 LINE L2 -19 3294 3202 334 264 45 55 chr10 22539734 22539844 -117776921 + MIR3 SINE MIR 3 111 -97 782 188 0 20 chr10 22539956 22540105 -117776660 - AluJo SINE Alu -166 146 1 196 313 0 16 chr10 22540632 22540696 -117776069 - L2 LINE L2 0 3272 3210 1926 151 3 16 chr10 22543604 22543915 -117772850 - AluJo SINE Alu -5 307 1 1971 94 28 0 chr10 22544225 22544511 -117772254 + L1PB1 LINE L1 5856 6149 -2 331 265 102 20 chr10 22544538 22544734 -117772031 - L1ME LINE L1 -410 5711 5500 526 264 0 0 chr10 22544833 22544962 -117771803 - L1ME LINE L1 -505 5616 5488 2150 194 14 14 chr10 22545094 22545516 -117771249 - MSTB LTR MaLR -4 422 1 1663 155 47 6 chr10 22545655 22545972 -117770793 - MLT1B LTR MaLR -60 330 1 2378 154 32 11 chr10 22545973 22546409 -117770356 - MER65A LTR ERV1 0 445 1 977 149 6 23 chr10 22546443 22546618 -117770147 + AluSx SINE Alu 29 200 -112 997 159 18 36 chr10 22546739 22546959 -117769806 - MER4B LTR ERV1 -394 216 1 1402 206 0 65 chr10 22547596 22547729 -117769036 + AluJo SINE Alu 1 141 -171 239 0 32 0 chr10 22547729 22547760 -117769005 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1983 138 3 3 chr10 22547762 22548044 -117768721 - AluSx SINE Alu -30 282 1 1402 206 0 65 chr10 22548044 22548228 -117768537 + AluJo SINE Alu 142 300 -12 1082 252 128 9 chr10 22548649 22548994 -117767771 - MLT1E LTR MaLR -2 591 206 360 0 0 0 chr10 22549436 22549476 -117767289 + (TAA)n Simple_repeat Simple_repeat 2 41 0 341 179 45 8 chr10 22549676 22549810 -117766955 + GA-rich Low_complexity Low_complexity 3 141 0 592 259 142 49 chr10 22550287 22550923 -117765842 - HAL1 LINE L1 -141 2366 1672 360 216 38 92 chr10 22551598 22551639 -117765126 + L1ME LINE L1 2214 2256 -3890 2056 138 13 10 chr10 22551639 22551944 -117764821 + AluSx SINE Alu 1 306 -6 360 216 38 92 chr10 22551944 22552087 -117764678 + L1ME LINE L1 2256 2388 -3758 6584 54 13 1 chr10 22552199 22553442 -117763323 - L1P2 LINE L1 -410 5744 4492 201 39 0 0 chr10 22553702 22553728 -117763037 + (TTG)n Simple_repeat Simple_repeat 2 27 0 796 168 0 0 chr10 22553742 22553873 -117762892 - FLAM_C SINE Alu 0 133 3 230 273 56 25 chr10 22554416 22554577 -117762188 + L1ME LINE L1 3681 3846 -2300 22 0 0 0 chr10 22554751 22554773 -117761992 + AT_rich Low_complexity Low_complexity 1 22 0 237 261 11 0 chr10 22554787 22554879 -117761886 + L1ME LINE L1 5337 5429 -2379 366 342 12 0 chr10 22554897 22555058 -117761707 + L1ME LINE L1 5582 5744 -426 1372 209 27 48 chr10 22555069 22555378 -117761387 + MLT1A1 LTR MaLR 1 302 -63 2121 148 0 3 chr10 22555378 22555688 -117761077 + AluJo SINE Alu 1 309 -3 1372 209 27 48 chr10 22555688 22555751 -117761014 + MLT1A1 LTR MaLR 302 365 0 1994 136 0 7 chr10 22556439 22556725 -117760040 + AluSx SINE Alu 1 284 -28 213 39 0 0 chr10 22556725 22556751 -117760014 + (CAAG)n Simple_repeat Simple_repeat 2 27 0 348 227 0 0 chr10 22557013 22557101 -117759664 + (TG)n Simple_repeat Simple_repeat 1 88 0 339 25 0 0 chr10 22558048 22558088 -117758677 + (TG)n Simple_repeat Simple_repeat 2 41 0 1280 231 105 43 chr10 22558090 22558510 -117758255 - MLT2B1 LTR ERVL -74 446 1 613 271 29 0 chr10 22558513 22558683 -117758082 + MER5B DNA MER1_type 4 178 0 350 360 29 29 chr10 22559155 22559294 -117757471 + L2 LINE L2 3134 3272 0 338 297 74 48 chr10 22559809 22560038 -117756727 + L2 LINE L2 3079 3313 0 4701 267 79 17 chr10 22560264 22562365 -117754400 + L1MEc LINE L1 175 2405 -3991 3426 222 44 38 chr10 22562358 22563349 -117753416 + L1M4 LINE L1 2 998 -5544 * 1024 203 0 16 chr10 22563361 22563548 -117753217 - AluJb SINE Alu -7 305 122 943 201 58 64 chr10 22563548 22563876 -117752889 + L1M4 LINE L1 1041 1366 -5176 721 271 165 20 chr10 22563893 22564244 -117752521 + MLT1G3 LTR MaLR 93 494 -36 1803 157 44 73 chr10 22564453 22564633 -117752132 + MER57A LTR ERV1 8 192 -211 2136 121 0 25 chr10 22564633 22564948 -117751817 - AluSx SINE Alu -3 309 3 1803 157 44 73 chr10 22564948 22565175 -117751590 + MER57A LTR ERV1 192 403 0 28 0 0 0 chr10 22566263 22566291 -117750474 + AT_rich Low_complexity Low_complexity 1 28 0 2101 128 3 0 chr10 22566296 22566593 -117750172 - AluSx SINE Alu -14 298 1 323 256 15 12 chr10 22567346 22567428 -117749337 - MIR SINE MIR -85 123 40 1980 133 41 49 chr10 22568890 22569257 -117747508 - THE1B LTR MaLR 0 364 1 2393 88 0 0 chr10 22569652 22569949 -117746816 - AluSg SINE Alu -11 299 3 234 314 178 35 chr10 22570622 22570880 -117745885 - L3 LINE CR1 -26 1551 1257 3843 94 24 0 chr10 22570961 22571502 -117745263 + MER41A LTR ERV1 1 554 0 2185 137 0 0 chr10 22573427 22573734 -117743031 - AluSq SINE Alu -6 307 1 22 35 0 0 chr10 22573761 22573790 -117742975 + AT_rich Low_complexity Low_complexity 1 29 0 470 302 68 0 chr10 22574670 22574935 -117741830 + L1MEc LINE L1 707 989 -5407 426 193 167 0 chr10 22575031 22575145 -117741620 + MER63 DNA MER1_type 2 760 -76 1135 234 56 36 chr10 22575209 22575842 -117740923 + L1MEc LINE L1 1918 2534 -3681 1832 211 67 4 chr10 22575847 22576387 -117740378 - MER114 LTR ERV 0 648 75 26 30 0 0 chr10 22577372 22577405 -117739360 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr10 22577433 22577454 -117739311 + AT_rich Low_complexity Low_complexity 1 21 0 359 331 78 13 chr10 22577863 22578017 -117738748 - MIR SINE MIR -86 176 13 1611 190 63 14 chr10 22578672 22579020 -117737745 + MLT1A1 LTR MaLR 1 365 0 410 229 16 49 chr10 22579671 22579793 -117736972 + MIR SINE MIR 115 232 -30 253 322 122 0 chr10 22579836 22579951 -117736814 - L2 LINE L2 -8 3264 3136 953 244 137 14 chr10 22580021 22580445 -117736320 - L1MB7 LINE L1 0 6184 5694 1309 237 45 28 chr10 22580462 22580720 -117736045 - L1ME1 LINE L1 -45 6121 5852 1718 123 0 0 chr10 22580720 22580956 -117735809 - AluSq SINE Alu -13 300 65 1309 237 45 28 chr10 22580956 22581119 -117735646 - L1ME1 LINE L1 -314 5852 5693 2166 121 0 3 chr10 22583700 22583997 -117732768 - AluSc SINE Alu -13 296 1 551 180 69 85 chr10 22585782 22585971 -117730794 + MER53 DNA DNA 2 187 -2 1672 172 7 21 chr10 22588306 22588591 -117728174 + AluJo SINE Alu 1 281 -31 2183 99 0 0 chr10 22588616 22588899 -117727866 - AluSx SINE Alu -16 296 14 287 389 25 13 chr10 22588976 22589133 -117727632 - L2 LINE L2 -421 2893 2735 24 32 0 0 chr10 22589570 22589601 -117727164 + AT_rich Low_complexity Low_complexity 1 31 0 650 212 97 0 chr10 22590690 22590855 -117725910 - MER20 DNA MER1_type 0 219 39 1332 182 13 33 chr10 22591627 22591929 -117724836 - L1MB7 LINE L1 -40 6144 5849 185 359 97 10 chr10 22592013 22592116 -117724649 + L2 LINE L2 2398 2509 -805 2557 105 8 3 chr10 22592184 22592546 -117724219 - THE1B LTR MaLR 0 364 1 1741 176 80 8 chr10 22593068 22593432 -117723333 - MLT1B LTR MaLR 0 390 1 1932 123 6 63 chr10 22593762 22594080 -117722685 - AluSx SINE Alu -12 300 1 275 317 24 16 chr10 22594557 22594680 -117722085 + MIR3 SINE MIR 85 208 0 376 254 78 56 chr10 22594766 22594908 -117721857 - MIR SINE MIR -8 254 110 1941 157 0 13 chr10 22594941 22595246 -117721519 + AluSx SINE Alu 1 301 -11 1005 219 38 86 chr10 22595682 22596079 -117720686 + MLT1C LTR MaLR 34 411 -56 252 0 0 0 chr10 22596079 22596107 -117720658 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 5942 53 1 0 chr10 22596111 22596880 -117719885 - L1PA5 LINE L1 -13 6141 5372 988 47 0 0 chr10 22596879 22597008 -117719757 + L1P LINE L1 4327 4455 -1691 * 267 153 34 0 chr10 22597008 22597067 -117719698 + MLT1A1 LTR MaLR 290 350 -15 1797 193 0 0 chr10 22597476 22597771 -117718994 - AluJb SINE Alu -14 298 4 29 28 0 0 chr10 22597773 22597809 -117718956 + AT_rich Low_complexity Low_complexity 1 36 0 1185 230 115 15 chr10 22598404 22598735 -117718030 + MLT1A1 LTR MaLR 2 365 0 2160 171 5 7 chr10 22598934 22599338 -117717427 + MER57A LTR ERV1 1 403 0 1200 249 83 8 chr10 22599618 22600004 -117716761 - L1ME1 LINE L1 -98 6068 5654 1803 24 0 0 chr10 22602207 22602419 -117714346 - L1PA4 LINE L1 -3 6152 5941 22 0 0 0 chr10 22603100 22603122 -117713643 + AT_rich Low_complexity Low_complexity 1 22 0 193 346 122 9 chr10 22603744 22603851 -117712914 + MIR3 SINE MIR 14 132 -76 975 179 19 24 chr10 22605498 22605705 -117711060 - MLT1C LTR MaLR -260 207 2 2372 104 0 3 chr10 22606402 22606711 -117710054 - AluSq SINE Alu -5 308 1 2022 128 122 31 chr10 22607148 22607540 -117709225 - MSTA LTR MaLR 0 428 1 551 333 127 26 chr10 22607777 22608243 -117708522 + L2 LINE L2 2456 2968 -346 455 208 8 0 chr10 22608273 22608398 -117708367 + (CA)n Simple_repeat Simple_repeat 1 126 0 200 175 25 0 chr10 22609115 22609155 -117707610 - L2 LINE L2 0 3313 3273 2140 98 14 11 chr10 22609583 22609870 -117706895 - AluSq SINE Alu -25 288 1 1336 194 22 80 chr10 22611208 22611522 -117705243 - AluJb SINE Alu -16 296 1 2315 167 17 14 chr10 22611674 22612094 -117704671 - MSTB LTR MaLR -5 421 1 2256 111 0 16 chr10 22612444 22612759 -117704006 + AluSx SINE Alu 1 310 -2 1901 130 31 14 chr10 22612982 22613274 -117703491 + AluSq SINE Alu 14 310 -3 227 175 18 0 chr10 22614765 22614822 -117701943 + CT-rich Low_complexity Low_complexity 2 59 0 245 231 0 0 chr10 22615290 22615342 -117701423 - MER112 DNA MER1_type 0 260 209 907 188 29 14 chr10 22615355 22615562 -117701203 - MLT1A1 LTR MaLR 0 365 156 670 224 7 7 chr10 22615601 22615753 -117701012 - MLT1A1 LTR MaLR -204 161 10 264 291 11 40 chr10 22617876 22618051 -117698714 + MER41B LTR ERV1 258 427 -208 2048 148 5 44 chr10 22618486 22618871 -117697894 + L1MC1 LINE L1 5964 6333 0 412 275 99 33 chr10 22619304 22619972 -117696793 + L1MCc LINE L1 1228 2088 -4853 561 207 136 20 chr10 22620020 22620218 -117696547 + L1ME2 LINE L1 5928 6148 -16 1758 68 4 0 chr10 22620308 22620556 -117696209 + L1PA7 LINE L1 1852 2100 -4046 16014 96 14 1 chr10 22620856 22623956 -117692809 + L1PA7 LINE L1 3037 6153 -1 281 294 18 0 chr10 22624132 22624241 -117692524 + L1ME LINE L1 5649 5759 -362 533 304 144 19 chr10 22624348 22624611 -117692154 - L2 LINE L2 -2797 517 222 383 277 62 15 chr10 22625929 22626059 -117690706 + Charlie1 DNA MER1_type 1 136 -2625 28 29 0 0 chr10 22626087 22626122 -117690643 + AT_rich Low_complexity Low_complexity 1 35 0 489 251 68 11 chr10 22626122 22626184 -117690581 + Charlie1 DNA MER1_type 2560 2617 -144 2348 96 0 0 chr10 22626184 22626477 -117690288 + AluSq SINE Alu 1 293 -20 489 251 68 11 chr10 22626477 22626605 -117690160 + Charlie1 DNA MER1_type 2617 2761 0 714 211 0 96 chr10 22627585 22627803 -117688962 + MER51C LTR ERV1 444 640 0 190 296 111 25 chr10 22630142 22630223 -117686542 + MIR3 SINE MIR 106 193 -15 2326 90 76 17 chr10 22632548 22632892 -117683873 + THE1B LTR MaLR 1 364 0 228 247 21 62 chr10 22633134 22633231 -117683534 + LTR16A1 LTR ERVL 1 93 -364 702 251 35 0 chr10 22633284 22633487 -117683278 + LTR16A LTR ERVL 224 433 -17 301 266 79 95 chr10 22633783 22634088 -117682677 + MER102b DNA MER1_type 38 337 -4 680 280 47 4 chr10 22634685 22634921 -117681844 + L2 LINE L2 872 1117 -2197 977 255 132 78 chr10 22635431 22635820 -117680945 + L2 LINE L2 75 508 -2806 3595 162 82 1 chr10 22635820 22636488 -117680277 - MER72 LTR ERV1 0 722 1 977 255 132 78 chr10 22636488 22636690 -117680075 + L2 LINE L2 508 698 -2616 740 313 30 13 chr10 22636691 22636921 -117679844 + L2 LINE L2 2542 2775 -539 4823 286 119 19 chr10 22636921 22637876 -117678889 + L2 LINE L2 634 1492 -1821 2169 115 20 0 chr10 22637876 22638180 -117678585 - AluSx SINE Alu -1 311 2 4823 286 119 19 chr10 22638180 22638282 -117678483 + L2 LINE L2 1492 1582 -1731 1779 156 111 26 chr10 22638282 22638661 -117678104 + MLT2D LTR ERVL 4 414 0 4823 286 119 19 chr10 22638661 22640029 -117676736 + L2 LINE L2 1582 3307 -6 351 312 15 50 chr10 22641365 22641567 -117675198 + L2 LINE L2 3119 3313 0 565 270 74 38 chr10 22642030 22642256 -117674509 - MIR SINE MIR -6 256 26 201 147 0 0 chr10 22643932 22643966 -117672799 + (TATG)n Simple_repeat Simple_repeat 2 35 0 208 208 62 0 chr10 22644088 22644136 -117672629 + L2 LINE L2 3222 3272 0 1799 183 10 3 chr10 22645969 22646269 -117670496 + AluJo SINE Alu 5 306 -6 27 49 0 0 chr10 22646666 22646707 -117670058 + AT_rich Low_complexity Low_complexity 1 41 0 199 347 0 13 chr10 22648095 22648170 -117668595 + MIR3 SINE MIR 89 162 -46 246 269 64 57 chr10 22648674 22648815 -117667950 + MIR SINE MIR 111 252 -10 338 304 67 42 chr10 22648907 22649220 -117667545 + HAL1b LINE L1 221 541 -807 325 320 82 70 chr10 22649356 22649928 -117666837 + L1MC4a LINE L1 4410 4988 -1158 1502 259 156 18 chr10 22650180 22650814 -117665951 + L1MC4a LINE L1 5254 6002 -1806 1798 165 14 22 chr10 22650814 22651172 -117665593 + THE1A LTR MaLR 1 355 0 1502 259 156 18 chr10 22651172 22651260 -117665505 + L1MC4a LINE L1 6002 6076 -1732 22 35 0 0 chr10 22651319 22651348 -117665417 + AT_rich Low_complexity Low_complexity 1 29 0 210 208 0 0 chr10 22651393 22651446 -117665319 + (TG)n Simple_repeat Simple_repeat 2 54 0 21 57 0 0 chr10 22651986 22652021 -117664744 + AT_rich Low_complexity Low_complexity 1 35 0 27 62 0 0 chr10 22652163 22652211 -117664554 + AT_rich Low_complexity Low_complexity 1 48 0 219 69 0 0 chr10 22653051 22653080 -117663685 + (A)n Simple_repeat Simple_repeat 1 29 0 1053 279 97 66 chr10 22654293 22654742 -117662023 - L2 LINE L2 -1 3312 2878 796 197 0 0 chr10 22654742 22654874 -117661891 + FLAM_C SINE Alu 1 132 -1 1053 279 97 66 chr10 22654874 22655309 -117661456 - L2 LINE L2 -435 2878 2422 260 304 140 49 chr10 22655320 22655563 -117661202 - L2 LINE L2 0 3313 3049 2667 259 126 13 chr10 22655587 22656562 -117660203 - L2 LINE L2 -418 2896 1812 2169 90 3 7 chr10 22657278 22657593 -117659172 + AluSc SINE Alu 1 309 0 263 360 72 0 chr10 22658820 22658931 -117657834 - L2 LINE L2 -7 3265 3147 2179 204 36 71 chr10 22661041 22661674 -117655091 - LTR9 LTR ERV1 0 612 2 249 240 62 129 chr10 22661675 22661900 -117654865 + HAL1 LINE L1 23 232 -2275 363 221 11 42 chr10 22662007 22662102 -117654663 + HAL1 LINE L1 1253 1344 -1163 990 243 13 59 chr10 22662110 22662143 -117654622 + MER21B LTR ERV1 1 34 -829 2695 108 6 0 chr10 22662143 22662505 -117654260 - THE1B LTR MaLR 0 364 1 990 243 13 59 chr10 22662505 22662775 -117653990 + MER21B LTR ERV1 34 290 -573 1008 216 37 54 chr10 22662888 22663184 -117653581 + MER21B LTR ERV1 466 756 -107 580 216 42 85 chr10 22663296 22663555 -117653210 + HAL1 LINE L1 1339 1586 -921 558 269 201 23 chr10 22663612 22664210 -117652555 + HAL1 LINE L1 1697 2400 -107 21 0 0 0 chr10 22665145 22665166 -117651599 + AT_rich Low_complexity Low_complexity 1 21 0 2156 157 0 0 chr10 22665344 22665656 -117651109 - AluSx SINE Alu 0 312 1 410 293 61 57 chr10 22665782 22665994 -117650771 + MIR SINE MIR 36 248 -14 219 170 0 0 chr10 22666413 22666460 -117650305 + (CAGTT)n Simple_repeat Simple_repeat 4 50 0 351 0 0 0 chr10 22667030 22667069 -117649696 + (TG)n Simple_repeat Simple_repeat 2 40 0 225 125 100 0 chr10 22667083 22667123 -117649642 - LTR65 LTR ERV1 -21 648 605 339 298 38 0 chr10 22667661 22667819 -117648946 - LTR65 LTR ERV1 -505 164 1 201 245 38 9 chr10 22667885 22667991 -117648774 + (TA)n Simple_repeat Simple_repeat 2 110 0 23 0 0 0 chr10 22668637 22668660 -117648105 + AT_rich Low_complexity Low_complexity 1 23 0 2024 146 7 0 chr10 22668671 22668980 -117647785 + AluSx SINE Alu 2 312 0 264 100 0 0 chr10 22669182 22669222 -117647543 + (CAT)n Simple_repeat Simple_repeat 3 42 0 23 33 0 0 chr10 22670263 22670293 -117646472 + AT_rich Low_complexity Low_complexity 1 30 0 381 260 102 0 chr10 22670352 22670529 -117646236 - L1ME4a LINE L1 -177 5944 5750 1941 25 0 0 chr10 22673470 22673706 -117643059 + L1HS LINE L1 5907 6142 -13 249 109 0 0 chr10 22673707 22673753 -117643012 + (TAAA)n Simple_repeat Simple_repeat 1 46 0 6274 162 42 13 chr10 22673782 22674080 -117642685 - L1 LINE L1 -1518 4628 4340 1806 169 3 7 chr10 22674080 22674381 -117642384 - AluJb SINE Alu -12 300 1 6274 162 42 13 chr10 22674381 22675416 -117641349 - L1 LINE L1 -1806 4340 3256 359 247 54 32 chr10 22675659 22675752 -117641013 + MIR SINE MIR 34 128 -134 443 334 13 5 chr10 22676402 22676587 -117640178 + MIR3 SINE MIR 15 200 -8 368 278 35 77 chr10 22676787 22676956 -117639809 + MLT1J LTR MaLR 258 419 -92 574 319 47 14 chr10 22677641 22677854 -117638911 + MIR SINE MIR 5 224 -38 2014 157 0 23 chr10 22678543 22678888 -117637877 - MER1B DNA MER1_type 0 337 1 211 237 105 26 chr10 22679026 22679102 -117637663 + MIR SINE MIR 181 262 0 231 339 150 0 chr10 22679103 22679230 -117637535 + L3b LINE CR1 1168 1313 -270 502 152 50 0 chr10 22679938 22680037 -117636728 - MER5A DNA MER1_type -77 112 9 2223 142 19 39 chr10 22682476 22682867 -117633898 + MER57A LTR ERV1 1 385 -18 2022 141 3 3 chr10 22682867 22683172 -117633593 - AluSx SINE Alu -7 305 1 2223 142 19 39 chr10 22683172 22683190 -117633575 + MER57A LTR ERV1 385 402 -1 195 381 39 35 chr10 22683219 22683450 -117633315 + L2 LINE L2 2828 3059 -213 2294 114 22 13 chr10 22683765 22684136 -117632629 - THE1B LTR MaLR 0 364 1 229 345 23 11 chr10 22684504 22684591 -117632174 - MIR SINE MIR -80 128 41 204 365 32 32 chr10 22685526 22685652 -117631113 - L2 LINE L2 -20 3293 3168 3194 143 55 74 chr10 22685830 22686534 -117630231 + LTR8 LTR ERV1 1 691 0 1154 225 171 7 chr10 22686603 22687043 -117629722 + L1M4 LINE L1 4382 4893 -1253 255 220 0 0 chr10 22687096 22687146 -117629619 - MIR SINE MIR -134 128 79 1926 162 42 0 chr10 22688002 22688335 -117628430 - MER7A DNA MER2_type -1 345 1 315 317 50 31 chr10 22688359 22688520 -117628245 - MIR3 SINE MIR -3 205 42 771 321 116 11 chr10 22689707 22690155 -117626610 + LTR33 LTR ERVL 5 499 -22 1694 144 3 75 chr10 22690274 22690593 -117626172 - AluSq SINE Alu -17 296 1 755 191 8 0 chr10 22690700 22690831 -117625934 - FLAM_A SINE Alu -1 132 1 2289 108 0 0 chr10 22691741 22692038 -117624727 + AluSc SINE Alu 1 297 -12 1296 199 10 37 chr10 22693677 22693974 -117622791 - AluJo SINE Alu -18 294 6 2191 102 16 16 chr10 22695402 22695715 -117621050 - AluSq SINE Alu 0 313 1 182 114 0 29 chr10 22696215 22696250 -117620515 + (CA)n Simple_repeat Simple_repeat 2 35 0 299 338 90 8 chr10 22696746 22696879 -117619886 + MIR SINE MIR 4 147 -115 367 167 78 0 chr10 22697204 22697294 -117619471 + L1MB3 LINE L1 6079 6175 -8 1981 159 0 6 chr10 22697941 22698255 -117618510 + AluJb SINE Alu 1 312 0 181 122 122 102 chr10 22698288 22698337 -117618428 - MER5B DNA MER1_type -70 108 59 2163 119 7 10 chr10 22698973 22699276 -117617489 - AluSq SINE Alu -11 302 1 273 119 0 0 chr10 22699630 22699672 -117617093 + (T)n Simple_repeat Simple_repeat 1 42 0 223 294 98 29 chr10 22699809 22699911 -117616854 + MIR SINE MIR 110 218 -44 1597 199 34 0 chr10 22700107 22700403 -117616362 + AluJo SINE Alu 6 311 -1 2197 103 10 3 chr10 22701165 22701465 -117615300 - AluSx SINE Alu 0 312 11 229 169 0 130 chr10 22701776 22701853 -117614912 + L1MC4 LINE L1 6637 6703 -1339 * 303 191 0 43 chr10 22701839 22701933 -117614832 - L1MC4 LINE L1 -1339 6703 6614 * 308 202 0 22 chr10 22701853 22701942 -117614823 + L1MC4 LINE L1 6614 6700 -1342 1540 187 21 21 chr10 22701945 22702229 -117614536 - AluJo SINE Alu -27 285 2 21 0 0 0 chr10 22702491 22702512 -117614253 + AT_rich Low_complexity Low_complexity 1 21 0 234 242 16 0 chr10 22702799 22702861 -117613904 - MIR SINE MIR -12 250 188 207 406 28 0 chr10 22705039 22705145 -117611620 - L3 LINE CR1 -19 1558 1450 1916 128 34 52 chr10 22712240 22712622 -117604143 + THE1C LTR MaLR 1 375 0 2556 169 37 27 chr10 22713735 22714249 -117602516 - L1MA9 LINE L1 -280 6032 5514 1908 146 54 0 chr10 22714839 22715133 -117601632 - AluSx SINE Alu -2 310 1 243 368 140 0 chr10 22715204 22715318 -117601447 + L2 LINE L2 3178 3307 -6 192 343 48 19 chr10 22716574 22716679 -117600086 - MIR SINE MIR -71 137 30 1522 129 12 0 chr10 22716788 22717036 -117599729 + L1MA5A LINE L1 6041 6291 -6 234 0 0 0 chr10 22717448 22717474 -117599291 + (TA)n Simple_repeat Simple_repeat 2 27 0 34 24 0 0 chr10 22717593 22717634 -117599131 + AT_rich Low_complexity Low_complexity 1 41 0 569 290 159 12 chr10 22717672 22717924 -117598841 - L2 LINE L2 -1 3312 3024 1489 289 51 46 chr10 22718239 22718943 -117597822 - L2 LINE L2 -321 2992 2287 2164 128 0 0 chr10 22719206 22719502 -117597263 + AluSx SINE Alu 1 296 -16 2092 132 3 0 chr10 22820229 22820532 -117496233 + AluY SINE Alu 1 304 -7 535 284 51 33 chr10 22820601 22820881 -117495884 - LTR16A LTR ERVL -1 490 164 441 253 108 6 chr10 22820889 22821047 -117495718 - MER63A DNA MER1_type -36 174 1 22 0 0 0 chr10 22821483 22821505 -117495260 + AT_rich Low_complexity Low_complexity 1 22 0 1618 159 11 39 chr10 22821512 22821795 -117494970 + AluJo SINE Alu 5 279 -33 190 115 39 19 chr10 22821832 22821884 -117494881 + A-rich Low_complexity Low_complexity 3 55 0 3396 168 32 19 chr10 22822740 22823334 -117493431 - LTR26 LTR ERV1 -1 602 1 502 273 99 12 chr10 22823509 22823670 -117493095 + MER5B DNA MER1_type 1 175 -3 2193 113 0 0 chr10 22824198 22824535 -117492230 + AluSq SINE Alu 3 313 0 2178 108 0 0 chr10 22824539 22824827 -117491938 + AluSg SINE Alu 1 288 -22 288 227 0 0 chr10 22825539 22825627 -117491138 + (CA)n Simple_repeat Simple_repeat 2 89 0 1193 223 34 30 chr10 22826208 22826504 -117490261 + AluJo SINE Alu 2 298 -4 1682 128 4 55 chr10 22826962 22827088 -117489677 - AluSq SINE Alu -54 259 153 2590 52 7 0 chr10 22827088 22827395 -117489370 - AluY SINE Alu -2 309 1 1682 128 4 55 chr10 22827395 22827541 -117489224 - AluSq SINE Alu -160 153 1 409 271 187 23 chr10 22827897 22828111 -117488654 - MIR SINE MIR -1 261 13 888 209 0 0 chr10 22828698 22828861 -117487904 + FRAM SINE Alu 1 163 -13 228 395 32 22 chr10 22828872 22829057 -117487708 - MER5A DNA MER1_type -1 188 2 933 223 58 27 chr10 22829290 22829325 -117487440 - MIR SINE MIR -6 256 224 3753 92 4 6 chr10 22829325 22829812 -117486953 + LTR19A LTR ERV1 1 486 0 933 223 58 27 chr10 22829812 22830000 -117486765 - MIR SINE MIR -38 224 26 598 88 0 0 chr10 22830373 22830453 -117486312 - LTR26B LTR ERV1 -451 80 1 1415 160 57 32 chr10 22830626 22830907 -117485858 + L1MB7 LINE L1 5897 6184 0 1499 173 73 30 chr10 22830907 22831371 -117485394 + LTR54 LTR ERV1 1 496 -2 823 194 6 12 chr10 22831530 22831700 -117485065 - L1P2 LINE L1 -530 5624 5456 2284 161 22 160 chr10 22831707 22831919 -117484846 + L1MCa LINE L1 1769 2008 -4418 610 198 0 20 chr10 22831919 22832020 -117484745 - FLAM_A SINE Alu -43 99 1 2284 161 22 160 chr10 22832020 22832908 -117483857 + L1MCa LINE L1 2008 2804 -3622 592 195 58 32 chr10 22833153 22833307 -117483458 + L1MA10 LINE L1 6177 6334 0 276 232 18 0 chr10 22833309 22833365 -117483400 + L2 LINE L2 2737 2793 -521 322 236 14 0 chr10 22833398 22833470 -117483295 + L2 LINE L2 3238 3310 -3 21 36 0 0 chr10 22833573 22833601 -117483164 + AT_rich Low_complexity Low_complexity 1 28 0 2474 172 79 16 chr10 22833615 22834121 -117482644 + L1MB8 LINE L1 5588 6125 -53 722 203 7 27 chr10 22834141 22834289 -117482476 - AluSq SINE Alu -20 293 149 1537 157 57 0 chr10 22834450 22834712 -117482053 + AluSg SINE Alu 8 284 -26 27 29 0 0 chr10 22834719 22834753 -117482012 + AT_rich Low_complexity Low_complexity 1 34 0 1104 117 6 53 chr10 22834753 22834924 -117481841 + AluSg/x SINE Alu 129 291 -21 449 213 16 63 chr10 22835014 22835141 -117481624 + MIR SINE MIR 92 212 -50 5373 90 18 42 chr10 22836018 22836895 -117479870 - L1P LINE L1 -2039 4107 3252 838 274 39 8 chr10 22837374 22837633 -117479132 - MER69 DNA AcHobo -2128 398 132 848 113 0 0 chr10 22837634 22837749 -117479016 + AluSg SINE Alu 1 115 -195 1979 144 0 0 chr10 22837751 22838036 -117478729 + AluSg SINE Alu 1 285 -25 880 142 0 68 chr10 22838074 22838279 -117478486 + AluSg SINE Alu 107 297 -13 291 281 76 76 chr10 22838484 22838747 -117478018 + LTR67 LTR ERVL 277 539 -18 2534 57 0 19 chr10 22838754 22839070 -117477695 - AluY SINE Alu -1 310 1 303 243 8 68 chr10 22839401 22839545 -117477220 - MLT1G1 LTR MaLR -2 579 460 2985 118 11 29 chr10 22840533 22840975 -117475790 - Tigger2a DNA MER2_type 0 434 1 481 274 108 32 chr10 22842415 22842647 -117474118 - MIR SINE MIR -13 249 1 189 0 0 0 chr10 22843168 22843189 -117473576 + (CTCA)n Simple_repeat Simple_repeat 1 21 0 387 0 0 0 chr10 22843459 22843502 -117473263 + (A)n Simple_repeat Simple_repeat 1 43 0 629 312 27 14 chr10 22844156 22844414 -117472351 + MIR SINE MIR 4 262 0 1967 154 0 19 chr10 22845302 22845614 -117471151 + AluJo SINE Alu 1 306 -6 218 371 0 0 chr10 22846145 22846234 -117470531 + G-rich Low_complexity Low_complexity 1 89 0 1056 47 78 0 chr10 22847640 22847768 -117468997 - MER85 DNA T2_type 0 139 2 2329 133 128 8 chr10 22848491 22848873 -117467892 - MSTA LTR MaLR 0 428 1 21 0 0 0 chr10 22850260 22850281 -117466484 + AT_rich Low_complexity Low_complexity 1 21 0 375 219 96 102 chr10 22850381 22850421 -117466344 - MER5A DNA MER1_type -3 186 147 2350 68 3 7 chr10 22850421 22850717 -117466048 + AluY SINE Alu 1 295 -16 375 219 96 102 chr10 22850717 22850863 -117465902 - MER5A DNA MER1_type -42 147 1 1709 160 25 7 chr10 22851437 22851718 -117465047 + AluJo SINE Alu 1 286 -26 32 43 0 0 chr10 22851719 22851765 -117465000 + AT_rich Low_complexity Low_complexity 1 46 0 537 325 30 22 chr10 22852019 22852362 -117464403 - L1MC4a LINE L1 -303 5818 5561 352 264 31 8 chr10 22854099 22854228 -117462537 + (TA)n Simple_repeat Simple_repeat 1 132 0 1017 131 95 12 chr10 22854228 22854396 -117462369 + MER44D DNA MER2_type 1 452 -157 324 151 0 0 chr10 22854413 22854466 -117462299 - L1PB1 LINE L1 -4 6147 6095 1619 56 65 0 chr10 22854466 22854681 -117462084 + L1P5 LINE L1 5324 5552 -599 1086 146 12 6 chr10 22854681 22854852 -117461913 + MER44D DNA MER2_type 434 605 0 227 145 58 0 chr10 22854869 22854938 -117461827 + (TA)n Simple_repeat Simple_repeat 2 74 0 1890 156 3 31 chr10 22856218 22856539 -117460226 - AluJo SINE Alu 0 312 1 272 286 247 19 chr10 22857092 22857246 -117459519 - MIR3 SINE MIR -6 202 14 1650 164 3 50 chr10 22858340 22858658 -117458107 - AluJo SINE Alu -9 303 1 2287 99 3 0 chr10 22859581 22859874 -117456891 + AluSx SINE Alu 1 294 -18 29 0 0 0 chr10 22860098 22860127 -117456638 + AT_rich Low_complexity Low_complexity 1 29 0 885 196 7 0 chr10 22860132 22860285 -117456480 - AluJo SINE Alu -35 277 124 243 310 0 14 chr10 22860300 22860371 -117456394 + L2 LINE L2 3182 3251 -62 1551 157 25 47 chr10 22861481 22861799 -117454966 - AluJo SINE Alu -1 311 1 355 321 42 31 chr10 22863038 22863231 -117453534 + MIR SINE MIR 12 206 -56 1984 130 20 3 chr10 22863800 22864101 -117452664 - AluSx SINE Alu -6 306 1 2074 98 4 0 chr10 22864728 22865003 -117451762 + AluSg1 SINE Alu 1 276 -33 439 293 32 104 chr10 22867484 22867859 -117448906 + L2 LINE L2 2915 3262 -10 2159 95 0 3 chr10 22869391 22869703 -117447062 + AluSx SINE Alu 1 311 0 631 287 105 5 chr10 22871661 22871870 -117444895 + MIR SINE MIR 19 248 -14 209 222 0 0 chr10 22871875 22871920 -117444845 + (TTA)n Simple_repeat Simple_repeat 3 47 0 226 299 27 61 chr10 22871929 22872076 -117444689 + MIR SINE MIR 67 208 -54 752 186 20 93 chr10 22872170 22872374 -117444391 + MER20 DNA MER1_type 31 219 0 2105 201 106 27 chr10 22872689 22873210 -117443555 + MER68 LTR ERV1 1 562 0 1938 154 0 13 chr10 22873298 22873609 -117443156 - AluJb SINE Alu -5 307 1 2237 115 0 28 chr10 22873919 22874240 -117442525 + AluSx SINE Alu 1 312 0 234 242 16 0 chr10 22874255 22874317 -117442448 + L1P LINE L1 1900 1962 -4184 212 167 0 0 chr10 22874431 22874467 -117442298 + (CA)n Simple_repeat Simple_repeat 1 36 0 332 275 98 79 chr10 22874475 22874893 -117441872 + L1MEc LINE L1 1877 2302 -4094 21 0 0 0 chr10 22878541 22878562 -117438203 + AT_rich Low_complexity Low_complexity 1 21 0 1461 112 0 15 chr10 22879522 22879728 -117437037 + AluSc SINE Alu 107 309 0 1935 171 0 3 chr10 22879844 22880148 -117436617 + AluJb SINE Alu 3 305 -7 354 243 78 0 chr10 22880341 22880444 -117436321 - MER117 DNA MER1_type -40 157 47 1157 66 0 0 chr10 22880757 22880893 -117435872 - L1PA10 LINE L1 -1 6167 6032 386 0 0 39 chr10 22880893 22880944 -117435821 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 225 156 0 0 chr10 22880944 22880976 -117435789 - AluSx SINE Alu -18 284 253 1913 141 4 0 chr10 22880976 22881252 -117435513 - AluSx SINE Alu -35 277 1 206 143 29 0 chr10 22881762 22881797 -117434968 + (CATA)n Simple_repeat Simple_repeat 3 38 0 1951 151 13 0 chr10 22881835 22882133 -117434632 + AluSx SINE Alu 1 302 -10 1608 179 23 23 chr10 22882133 22882440 -117434325 + AluJo SINE Alu 1 307 -5 28 0 0 0 chr10 22883429 22883457 -117433308 + AT_rich Low_complexity Low_complexity 1 28 0 648 232 55 48 chr10 22883463 22883663 -117433102 + L1ME1 LINE L1 5962 6162 -20 230 245 255 46 chr10 22883894 22884090 -117432675 + HAL1 LINE L1 1347 1583 -924 7368 69 11 12 chr10 22884161 22885481 -117431284 - L1PA8 LINE L1 -10 6162 4842 610 306 50 12 chr10 22885588 22885830 -117430935 + MER112 DNA MER1_type 8 258 -2 2205 166 23 29 chr10 22885970 22886037 -117430728 - MSTB LTR MaLR -2 424 358 1861 109 101 0 chr10 22886037 22886304 -117430461 + AluSc SINE Alu 3 296 -13 2205 166 23 29 chr10 22886304 22886622 -117430143 - MSTB LTR MaLR -68 358 41 1896 116 14 28 chr10 22886622 22886635 -117430130 - L1PA15 LINE L1 0 6165 6153 2122 141 157 5 chr10 22886635 22887004 -117429761 + MSTA LTR MaLR 4 428 0 1896 116 14 28 chr10 22887004 22887274 -117429491 - L1PA15 LINE L1 -12 6153 5886 3116 112 9 2 chr10 22887606 22888053 -117428712 - MER41B LTR ERV1 -91 544 95 627 264 107 5 chr10 22888075 22888272 -117428493 - MIR SINE MIR 0 262 46 1889 228 28 5 chr10 22888280 22888706 -117428059 - MER63B DNA MER1_type 0 436 1 22 35 0 0 chr10 22889794 22889823 -117426942 + AT_rich Low_complexity Low_complexity 1 29 0 2248 80 22 26 chr10 22890064 22890377 -117426388 + AluSx SINE Alu 1 312 0 5778 143 44 9 chr10 22891462 22891957 -117424808 + L1MA8 LINE L1 5285 5761 -530 180 0 0 0 chr10 22891957 22891977 -117424788 + (CA)n Simple_repeat Simple_repeat 2 21 0 5778 143 44 9 chr10 22891977 22892452 -117424313 + L1MA8 LINE L1 5761 6289 -2 2357 76 0 7 chr10 22892550 22892854 -117423911 - AluY SINE Alu -9 302 1 24 32 0 0 chr10 22893483 22893514 -117423251 + AT_rich Low_complexity Low_complexity 1 31 0 384 286 9 9 chr10 22893656 22893761 -117423004 + MIR SINE MIR 37 141 -67 180 0 0 0 chr10 22894403 22894423 -117422342 + (A)n Simple_repeat Simple_repeat 1 20 0 1963 190 45 30 chr10 22894509 22894667 -117422098 - MLT2D LTR ERVL -8 406 252 2026 114 0 44 chr10 22894667 22894984 -117421781 + AluSx SINE Alu 1 303 -9 1963 190 45 30 chr10 22894984 22895225 -117421540 - MLT2D LTR ERVL -162 252 1 248 182 15 76 chr10 22895985 22896051 -117420714 + MIR3 SINE MIR 139 200 -8 189 313 101 0 chr10 22896288 22896387 -117420378 - MIR SINE MIR -53 209 101 2124 218 36 6 chr10 22897191 22897719 -117419046 + L1M4c LINE L1 1935 2478 -3906 328 206 14 0 chr10 22897721 22897794 -117418971 - L1MA10 LINE L1 -1 6333 6260 688 159 0 19 chr10 22897843 22897950 -117418815 + FLAM_A SINE Alu 4 108 -34 204 97 0 0 chr10 22897953 22897984 -117418781 + (GGAGA)n Simple_repeat Simple_repeat 5 35 0 1419 128 66 4 chr10 22898858 22899100 -117417665 + L1MA4 LINE L1 6042 6298 -2 25 51 0 0 chr10 22899100 22899139 -117417626 + AT_rich Low_complexity Low_complexity 1 39 0 232 266 75 11 chr10 22899372 22899466 -117417299 + HAL1b LINE L1 1232 1331 -17 2184 136 0 0 chr10 22899703 22900013 -117416752 + AluSx SINE Alu 1 310 -2 637 262 120 0 chr10 22901486 22901669 -117415096 + MIR SINE MIR 44 248 -14 286 288 64 36 chr10 22902414 22902585 -117414180 + L1ME1 LINE L1 5505 5677 -493 248 261 72 68 chr10 22902609 22902831 -117413934 + L1ME1 LINE L1 5777 5999 -167 1713 146 57 36 chr10 22903495 22903796 -117412969 - AluJb SINE Alu -5 307 1 378 111 0 0 chr10 22906362 22906416 -117410349 - MER5A DNA MER1_type -2 187 134 1326 271 69 15 chr10 22906434 22906913 -117409852 + L2 LINE L2 1559 2063 -1251 844 221 12 0 chr10 22906913 22907085 -117409680 + MLT1B LTR MaLR 1 174 -216 322 237 34 45 chr10 22907119 22907357 -117409408 + (ATATG)n Simple_repeat Simple_repeat 1 235 0 215 82 52 67 chr10 22907393 22907528 -117409237 + (TA)n Simple_repeat Simple_repeat 1 133 0 1877 135 0 80 chr10 22908339 22908666 -117408099 + AluJb SINE Alu 6 306 -6 1476 153 91 11 chr10 22909567 22909828 -117406937 + AluSx SINE Alu 1 301 -11 214 108 0 0 chr10 22909828 22909865 -117406900 + (TAAA)n Simple_repeat Simple_repeat 2 132 0 1476 153 91 11 chr10 22909865 22909878 -117406887 + AluSx SINE Alu 301 312 0 940 174 0 0 chr10 22909878 22910033 -117406732 + AluJb SINE Alu 134 288 -24 190 172 0 0 chr10 22911614 22911643 -117405122 - L2 LINE L2 -18 3254 3226 2489 57 3 0 chr10 22912927 22913226 -117403539 - AluY SINE Alu -11 300 1 298 376 31 47 chr10 22913526 22913654 -117403111 + L3 LINE CR1 1281 1405 -172 1730 148 31 14 chr10 22913654 22913944 -117402821 + AluJb SINE Alu 1 295 -17 298 376 31 47 chr10 22913944 22914070 -117402695 + L3 LINE CR1 1405 1531 -46 764 240 203 31 chr10 22914368 22914689 -117402076 + MLT1K LTR MaLR 210 585 -3 1784 168 0 11 chr10 22914832 22915144 -117401621 - AluJo SINE Alu 0 309 1 1655 159 29 0 chr10 22916858 22917135 -117399630 + AluJo SINE Alu 9 293 -19 229 161 16 16 chr10 22917135 22917197 -117399568 + (TTA)n Simple_repeat Simple_repeat 1 62 0 459 252 160 0 chr10 22917469 22917600 -117399165 - MER5B DNA MER1_type -2 176 25 1165 233 55 70 chr10 22917632 22917764 -117399001 - MLT1C LTR MaLR -3 464 332 2052 140 13 3 chr10 22917764 22918072 -117398693 - AluSq SINE Alu -2 311 1 1165 233 55 70 chr10 22918072 22918363 -117398402 - MLT1C LTR MaLR -135 332 59 2028 149 0 0 chr10 22918663 22918958 -117397807 + AluSx SINE Alu 1 295 -17 874 166 6 19 chr10 22919133 22919290 -117397475 + FRAM SINE Alu 4 158 -18 2177 125 0 3 chr10 22919290 22919593 -117397172 + AluSx SINE Alu 1 302 -10 2293 79 0 3 chr10 22919748 22920038 -117396727 + AluY SINE Alu 1 289 -22 321 26 0 0 chr10 22920038 22920076 -117396689 + (TA)n Simple_repeat Simple_repeat 2 39 0 218 299 140 19 chr10 22920694 22920801 -117395964 + MIR SINE MIR 108 227 -35 185 260 40 0 chr10 22920771 22920821 -117395944 + L2 LINE L2 3201 3252 -20 * 1413 206 20 13 chr10 22921324 22921725 -117395040 + L1MB8 LINE L1 5512 5948 -230 2223 99 7 3 chr10 22922194 22922496 -117394269 - AluY SINE Alu -8 303 1 571 295 95 17 chr10 22922567 22922808 -117393957 + MIR SINE MIR 3 262 0 2223 99 7 3 chr10 22924099 22924401 -117392364 - AluY SINE Alu -8 303 1 1844 152 0 7 chr10 22924419 22924729 -117392036 - AluJo SINE Alu 0 308 1 3546 176 19 39 chr10 22925385 22925786 -117390979 + L1MB3 LINE L1 5219 5626 -548 2365 106 0 6 chr10 22925786 22926098 -117390667 + AluSx SINE Alu 3 312 0 3546 176 19 39 chr10 22926098 22926707 -117390058 + L1MB3 LINE L1 5626 6173 -1 2283 77 0 11 chr10 22926946 22927271 -117389494 + AluY SINE Alu 1 322 0 315 243 50 60 chr10 22929006 22929139 -117387626 - MIR SINE MIR -62 146 52 841 259 43 21 chr10 22929789 22930071 -117386694 - MARNA DNA Mariner -19 567 280 235 255 69 88 chr10 22930278 22930468 -117386297 - MARNA DNA Mariner -357 229 42 2169 126 7 3 chr10 22930468 22930778 -117385987 - AluSx SINE Alu -1 311 1 235 255 69 88 chr10 22930778 22930803 -117385962 - MARNA DNA Mariner -544 42 18 1954 218 24 27 chr10 22931010 22931569 -117385196 + L1MC4 LINE L1 6441 7089 -797 1693 248 116 8 chr10 22931604 22932104 -117384661 + L1MC4 LINE L1 7352 7905 -137 270 0 0 0 chr10 22932159 22932189 -117384576 + (A)n Simple_repeat Simple_repeat 1 30 0 2181 123 3 0 chr10 22932385 22932685 -117384080 - AluSx SINE Alu -11 301 1 231 159 116 87 chr10 22932692 22932761 -117384004 - MER21A LTR ERV1 -295 636 566 1650 124 0 0 chr10 22933227 22933453 -117383312 + AluJb SINE Alu 42 267 -45 1036 101 0 71 chr10 22934081 22934250 -117382515 + AluSg/x SINE Alu 156 312 0 1662 173 0 43 chr10 22934963 22935264 -117381501 + AluJo SINE Alu 1 288 -24 1994 152 3 0 chr10 22936119 22936421 -117380344 + AluJb SINE Alu 1 303 -9 745 239 146 58 chr10 22937611 22937843 -117378922 - MLT1I LTR MaLR 0 409 130 1447 189 60 7 chr10 22937843 22938124 -117378641 + AluJo SINE Alu 3 298 -14 745 239 146 58 chr10 22938124 22938267 -117378498 - MLT1I LTR MaLR -279 130 1 248 315 11 11 chr10 22938358 22938447 -117378318 - MER117 DNA MER1_type -107 90 2 285 278 26 17 chr10 22939595 22939710 -117377055 + L2 LINE L2 2217 2332 -982 1205 108 165 19 chr10 22939961 22940173 -117376592 - MER2 DNA MER2_type -97 248 6 244 381 127 11 chr10 22940423 22940793 -117375972 + L2 LINE L2 2222 2634 -680 1618 173 7 22 chr10 22941272 22941550 -117375215 - AluJo SINE Alu -34 278 5 216 0 0 0 chr10 22941849 22941873 -117374892 + (TTCA)n Simple_repeat Simple_repeat 3 26 0 387 0 0 0 chr10 22942209 22942252 -117374513 + (TAA)n Simple_repeat Simple_repeat 1 43 0 1650 130 4 65 chr10 22943697 22943843 -117372922 + AluSq SINE Alu 1 124 -189 2596 55 7 0 chr10 22943843 22944152 -117372613 + AluY SINE Alu 1 311 0 1650 130 4 65 chr10 22944152 22944281 -117372484 + AluSq SINE Alu 124 259 -54 323 266 79 96 chr10 22944655 22944832 -117371933 + MER5A DNA MER1_type 16 189 0 426 247 162 45 chr10 22945478 22945632 -117371133 + MIR3 SINE MIR 21 192 -16 360 0 0 0 chr10 22946111 22946151 -117370614 + (TG)n Simple_repeat Simple_repeat 2 41 0 1541 197 25 4 chr10 22946151 22946430 -117370335 - AluJo SINE Alu -27 285 1 23 0 0 0 chr10 22946734 22946757 -117370008 + AT_rich Low_complexity Low_complexity 1 23 0 2105 98 0 27 chr10 22946793 22947089 -117369676 + AluSg SINE Alu 1 288 -22 288 227 0 0 chr10 22947802 22947890 -117368875 + (CA)n Simple_repeat Simple_repeat 2 89 0 1435 193 13 27 chr10 22948471 22948772 -117367993 + AluJo SINE Alu 3 299 -13 23 0 0 0 chr10 22949586 22949609 -117367156 + AT_rich Low_complexity Low_complexity 1 23 0 598 279 97 21 chr10 22950942 22951297 -117365468 + MLT1J LTR MaLR 101 503 -8 197 315 14 41 chr10 22951536 22951609 -117365156 - L2 LINE L2 -19 3253 3183 5399 224 83 60 chr10 22951885 22952444 -117364321 - L1ME1 LINE L1 -5 6230 5685 1549 85 43 9 chr10 22952444 22952655 -117364110 - L1PA10 LINE L1 -1 6167 5950 5399 224 83 60 chr10 22952655 22952838 -117363927 - L1ME1 LINE L1 -550 5685 5508 2298 84 0 3 chr10 22952838 22953135 -117363630 - AluY SINE Alu -15 296 1 5399 224 83 60 chr10 22953135 22954806 -117361959 - L1ME1 LINE L1 -727 5508 3758 23073 74 11 2 chr10 22954808 22958531 -117358234 - L1PA6 LINE L1 -2 6152 2405 9014 89 2 5 chr10 22958531 22959765 -117357000 - L1P LINE L1 -1899 4247 3018 1022 251 130 22 chr10 22959768 22960214 -117356551 - L1ME1 LINE L1 -2453 3762 3269 7846 79 3 6 chr10 22960512 22962382 -117354383 + L1PA6 LINE L1 4278 6154 0 523 173 0 16 chr10 22962649 22962776 -117353989 + GA-rich Low_complexity Low_complexity 3 127 0 3723 226 63 35 chr10 22963480 22965800 -117350965 - L1ME1 LINE L1 -2938 3277 917 1370 228 11 58 chr10 22965804 22966185 -117350580 - MLT1A2 LTR MaLR -11 363 1 1671 244 89 55 chr10 22966185 22966294 -117350471 - L1ME1 LINE L1 -5472 924 820 1735 196 7 7 chr10 22966294 22966600 -117350165 - AluJo SINE Alu -6 306 1 1671 244 89 55 chr10 22966600 22967344 -117349421 - L1ME1 LINE L1 -5576 820 42 626 274 63 38 chr10 22967417 22967654 -117349111 + MIR SINE MIR 3 245 -17 426 209 64 0 chr10 22968891 22969001 -117347764 - L1MC4 LINE L1 0 8042 7926 233 254 35 21 chr10 22969001 22969143 -117347622 + (TA)n Simple_repeat Simple_repeat 2 145 0 * 251 153 38 61 chr10 22969045 22969176 -117347589 + (TATAA)n Simple_repeat Simple_repeat 1 128 0 1418 249 120 43 chr10 22969236 22969717 -117347048 - L1MC4 LINE L1 -150 7892 7449 1794 169 3 17 chr10 22969717 22970018 -117346747 + AluJo SINE Alu 1 297 -15 294 29 0 0 chr10 22970018 22970053 -117346712 + (TA)n Simple_repeat Simple_repeat 1 35 0 1418 249 120 43 chr10 22970053 22970288 -117346477 - L1MC4 LINE L1 -592 7450 7120 207 0 0 0 chr10 22970309 22970332 -117346433 + (A)n Simple_repeat Simple_repeat 1 23 0 265 386 58 0 chr10 22971228 22971399 -117345366 - L3 LINE CR1 -1 1576 1396 2143 123 0 0 chr10 22971633 22971956 -117344809 - AluSx SINE Alu 0 323 1 206 241 35 17 chr10 22973355 22973471 -117343294 + (TA)n Simple_repeat Simple_repeat 2 119 0 1644 189 3 26 chr10 22974301 22974613 -117342152 + AluJo SINE Alu 1 305 -7 357 125 0 0 chr10 22974825 22974881 -117341884 + (CA)n Simple_repeat Simple_repeat 1 56 0 195 261 92 0 chr10 22976193 22976258 -117340507 - MIR3 SINE MIR -25 183 113 267 156 45 97 chr10 22976280 22976322 -117340443 + L1MC5 LINE L1 6876 6919 -1090 2089 124 0 10 chr10 22976322 22976628 -117340137 + AluSg SINE Alu 1 303 -7 267 156 45 97 chr10 22976628 22976718 -117340047 + L1MC5 LINE L1 6919 7007 -1002 439 306 10 14 chr10 22976794 22977003 -117339762 + L1MC5 LINE L1 6984 7191 -770 574 244 35 103 chr10 22977155 22977667 -117339098 + L1MC5 LINE L1 7260 7736 -225 1200 134 13 38 chr10 22978656 22978895 -117337870 + L1MCa LINE L1 1701 1933 -4493 216 0 0 0 chr10 22978901 22978925 -117337840 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 576 198 0 20 chr10 22978940 22979041 -117337724 - FLAM_A SINE Alu -43 99 1 5103 217 24 24 chr10 22979041 22981054 -117335711 + L1MCa LINE L1 1938 3951 -2475 4480 179 30 9 chr10 22981607 22982806 -117333959 - L1MB7 LINE L1 -19 6165 4940 511 283 109 30 chr10 22983072 22983302 -117333463 + MIR SINE MIR 15 262 0 2137 126 3 13 chr10 22983569 22983871 -117332894 + AluSx SINE Alu 1 299 -13 247 293 75 35 chr10 22984464 22984638 -117332127 + MARNA DNA Mariner 104 284 -302 246 400 23 17 chr10 22985772 22985947 -117330818 + MER5A DNA MER1_type 13 188 -1 895 209 0 0 chr10 22985958 22986121 -117330644 - FRAM SINE Alu -13 163 1 424 271 187 23 chr10 22986709 22986923 -117329842 + MIR SINE MIR 13 261 -1 1468 179 69 35 chr10 22987279 22987569 -117329196 + AluJo SINE Alu 1 300 -12 275 67 44 0 chr10 22987569 22987614 -117329151 + GA-rich Low_complexity Low_complexity 1 47 0 431 311 196 9 chr10 22988223 22988442 -117328323 - MIR SINE MIR 0 262 3 22 0 0 0 chr10 22988446 22988468 -117328297 + AT_rich Low_complexity Low_complexity 1 22 0 1891 113 13 50 chr10 22989495 22989796 -117326969 + AluSx SINE Alu 1 290 -22 21 0 0 0 chr10 22989798 22989819 -117326946 + AT_rich Low_complexity Low_complexity 1 21 0 1791 73 0 0 chr10 22990364 22990597 -117326168 + L1PA8 LINE L1 5938 6170 -2 1774 215 73 18 chr10 22990614 22991163 -117325602 + L1MC4 LINE L1 7463 8041 -1 263 376 97 18 chr10 22992133 22992298 -117324467 + L3b LINE CR1 1368 1545 -38 1141 138 69 62 chr10 22992306 22992566 -117324199 + MER1B DNA MER1_type 78 339 0 197 83 28 0 chr10 22992614 22992650 -117324115 + (TG)n Simple_repeat Simple_repeat 1 37 0 2296 108 3 0 chr10 22992793 22993098 -117323667 + AluSq SINE Alu 1 306 -7 349 326 57 14 chr10 22993264 22993405 -117323360 + MIR3 SINE MIR 42 188 -20 2115 131 0 3 chr10 22994070 22994375 -117322390 + AluSx SINE Alu 1 304 -8 187 319 112 35 chr10 22994377 22994493 -117322272 + MIR SINE MIR 29 153 -55 371 345 125 8 chr10 22994695 22995072 -117321693 + L1MC4a LINE L1 5412 5832 -1976 315 224 0 0 chr10 22995106 22995164 -117321601 + L2 LINE L2 3256 3313 0 316 308 72 37 chr10 22995174 22995388 -117321377 - MIR SINE MIR -43 219 3 212 211 0 0 chr10 22995666 22995704 -117321061 - L2 LINE L2 -16 3256 3219 187 366 98 0 chr10 22996946 22997129 -117319636 + L2 LINE L2 1656 1856 -1458 295 301 228 52 chr10 22997506 22997831 -117318934 - L2 LINE L2 -1 3312 2931 290 197 14 26 chr10 22997866 22997949 -117318816 + MER21A LTR ERV1 1 83 -780 242 158 134 85 chr10 22998044 22998126 -117318639 + MER21A LTR ERV1 70 155 -776 2157 123 0 7 chr10 22998142 22998451 -117318314 - AluSc SINE Alu -2 307 1 2589 188 66 88 chr10 22998492 22998915 -117317850 + MER21A LTR ERV1 115 513 -418 2203 130 0 0 chr10 22998915 22999216 -117317549 - AluSx SINE Alu -11 301 1 2589 188 66 88 chr10 22999216 22999608 -117317157 + MER21A LTR ERV1 513 912 -19 28 29 0 0 chr10 22999780 22999815 -117316950 + AT_rich Low_complexity Low_complexity 1 35 0 730 258 60 95 chr10 23001097 23001685 -117315080 + L2 LINE L2 2652 3313 0 820 163 8 0 chr10 23002095 23002224 -117314541 + FRAM SINE Alu 39 168 -8 454 213 16 63 chr10 23002741 23002868 -117313897 - MIR SINE MIR -50 212 92 1112 128 0 52 chr10 23002958 23003130 -117313635 - AluSg/x SINE Alu -21 291 129 27 29 0 0 chr10 23003130 23003164 -117313601 + AT_rich Low_complexity Low_complexity 1 34 0 1921 118 48 0 chr10 23003171 23003442 -117313323 - AluSg SINE Alu -26 284 1 2288 121 0 0 chr10 23003806 23004104 -117312661 + AluSx SINE Alu 1 298 -14 2830 90 11 54 chr10 23004454 23004548 -117312217 - L1MA2 LINE L1 0 6304 6208 2218 96 0 0 chr10 23004548 23004841 -117311924 + AluSg SINE Alu 1 293 -17 2830 90 11 54 chr10 23004841 23005211 -117311554 - L1MA2 LINE L1 -96 6208 5860 2050 130 3 7 chr10 23006917 23007216 -117309549 + AluSx SINE Alu 1 298 -14 1710 128 13 99 chr10 23007374 23007756 -117309009 + MLT1B LTR MaLR 37 385 -5 298 381 95 6 chr10 23007786 23007954 -117308811 - L3 LINE CR1 -1282 295 113 403 173 90 147 chr10 23007963 23008119 -117308646 - MIR SINE MIR 0 262 116 247 207 69 0 chr10 23008121 23008179 -117308586 - MIR SINE MIR -115 147 86 840 158 0 0 chr10 23010811 23010965 -117305800 - FLAM_C SINE Alu 0 154 1 1417 270 71 67 chr10 23011457 23012145 -117304620 + MER21B LTR ERV1 24 714 -149 405 240 80 29 chr10 23012574 23012749 -117304016 - MIR SINE MIR -4 258 75 181 325 120 40 chr10 23012741 23013015 -117303750 - L2 LINE L2 -417 2897 2602 * 188 296 56 0 chr10 23014766 23014837 -117301928 - MIR SINE MIR -57 205 131 298 77 0 0 chr10 23015230 23015269 -117301496 + 5S rRNA rRNA 2 40 -81 2284 51 0 0 chr10 23015610 23015883 -117300882 + AluY SINE Alu 39 311 0 467 271 130 5 chr10 23015883 23016075 -117300690 + MER112 DNA MER1_type 35 250 -10 314 348 87 5 chr10 23016195 23016402 -117300363 - MIR SINE MIR -7 255 32 622 276 45 71 chr10 23018121 23018400 -117298365 + L1MC4 LINE L1 7630 7915 -127 2388 80 0 7 chr10 23018400 23018701 -117298064 + AluY SINE Alu 1 299 -12 360 0 0 0 chr10 23018701 23018741 -117298024 + (TA)n Simple_repeat Simple_repeat 2 41 0 622 276 45 71 chr10 23018741 23018884 -117297881 + L1MC4 LINE L1 7913 8042 0 2318 112 3 0 chr10 23020687 23020999 -117295766 + AluSp SINE Alu 1 313 0 595 250 7 20 chr10 23021193 23021345 -117295420 + MIR SINE MIR 108 257 -5 24 0 0 0 chr10 23023477 23023501 -117293264 + GC_rich Low_complexity Low_complexity 1 24 0 486 283 35 45 chr10 23024798 23024996 -117291769 + MIR SINE MIR 43 238 -24 1891 146 0 42 chr10 23025626 23025934 -117290831 - AluJo SINE Alu -15 297 3 694 220 56 84 chr10 23026736 23027069 -117289696 + MLT1I LTR MaLR 98 547 -2 2487 73 3 0 chr10 23027158 23027461 -117289304 - AluY SINE Alu -7 304 1 191 261 261 13 chr10 23027891 23028048 -117288717 - L2 LINE L2 -1 3312 3117 1826 165 124 81 chr10 23028549 23028730 -117288035 + MLT1D LTR MaLR 1 173 -332 3869 123 36 2 chr10 23028730 23029313 -117287452 + LTR26 LTR ERV1 1 603 0 1826 165 124 81 chr10 23029313 23029489 -117287276 + MLT1D LTR MaLR 173 387 -118 2128 144 3 0 chr10 23029489 23029795 -117286970 + AluSx SINE Alu 1 307 -5 1826 165 124 81 chr10 23029795 23029920 -117286845 + MLT1D LTR MaLR 387 505 0 25 0 0 0 chr10 23030582 23030607 -117286158 + AT_rich Low_complexity Low_complexity 1 25 0 2057 144 0 3 chr10 23030613 23030911 -117285854 + AluSp SINE Alu 1 297 -16 314 140 0 0 chr10 23030931 23030981 -117285784 + L1PA8 LINE L1 6122 6171 -1 1739 181 0 13 chr10 23031823 23032122 -117284643 + AluJo SINE Alu 1 295 -17 1363 158 60 54 chr10 23032304 23032620 -117284145 - MER33 DNA MER1_type -2 322 5 239 308 0 33 chr10 23032879 23032996 -117283769 + GA-rich Low_complexity Low_complexity 4 176 0 2395 118 19 16 chr10 23033378 23033741 -117283024 + THE1B LTR MaLR 1 364 0 379 247 205 8 chr10 23034352 23034591 -117282174 + L1ME4a LINE L1 5814 6099 -22 2388 82 7 7 chr10 23035121 23035427 -117281338 - AluSx SINE Alu -2 310 5 22 0 0 0 chr10 23035865 23035887 -117280878 + AT_rich Low_complexity Low_complexity 1 22 0 201 39 0 0 chr10 23035887 23035913 -117280852 + (CA)n Simple_repeat Simple_repeat 2 27 0 22 0 0 0 chr10 23036128 23036150 -117280615 + AT_rich Low_complexity Low_complexity 1 22 0 390 21 0 0 chr10 23036150 23036197 -117280568 + (CA)n Simple_repeat Simple_repeat 2 48 0 416 189 0 63 chr10 23036200 23036295 -117280470 + MLT1A1 LTR MaLR 24 112 -253 1761 158 41 35 chr10 23036309 23036446 -117280319 + MER2 DNA MER2_type 1 136 -209 1715 109 0 0 chr10 23036446 23036676 -117280089 - MER30 DNA MER1_type 0 230 1 1761 158 41 35 chr10 23036676 23036880 -117279885 + MER2 DNA MER2_type 136 344 -1 384 22 0 0 chr10 23036881 23036926 -117279839 + (TG)n Simple_repeat Simple_repeat 2 46 0 251 167 100 0 chr10 23036945 23037005 -117279760 - L1MCa LINE L1 -4495 1931 1866 204 125 0 0 chr10 23037017 23037049 -117279716 + (CATA)n Simple_repeat Simple_repeat 2 33 0 935 129 13 13 chr10 23037073 23037222 -117279543 + THE1C LTR MaLR 216 375 0 2545 195 29 65 chr10 23037226 23037374 -117279391 - L1MCa LINE L1 -5798 628 476 416 66 0 16 chr10 23037374 23037435 -117279330 + (TTA)n Simple_repeat Simple_repeat 1 60 0 1951 135 0 0 chr10 23037443 23037710 -117279055 - AluJb SINE Alu -45 267 1 2545 195 29 65 chr10 23037710 23038183 -117278582 - L1MCa LINE L1 -5957 469 21 2015 120 38 0 chr10 23038495 23038786 -117277979 - AluSq SINE Alu -11 302 1 1227 217 119 65 chr10 23038939 23039348 -117277417 + MLT1D LTR MaLR 1 441 -64 2348 76 0 16 chr10 23039348 23039663 -117277102 - AluY SINE Alu -1 310 1 1227 217 119 65 chr10 23039663 23039732 -117277033 + MLT1D LTR MaLR 441 505 0 214 352 88 8 chr10 23039945 23040070 -117276695 + L2 LINE L2 3137 3271 -1 1758 169 3 23 chr10 23040094 23040402 -117276363 + AluJo SINE Alu 1 302 -10 796 242 71 8 chr10 23041108 23041348 -117275417 - MIR SINE MIR -5 257 3 186 43 0 0 chr10 23042042 23042065 -117274700 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 1515 171 38 7 chr10 23042085 23042372 -117274393 - AluSx SINE Alu -9 303 8 28 0 0 0 chr10 23042515 23042543 -117274222 + AT_rich Low_complexity Low_complexity 1 28 0 2309 107 0 7 chr10 23042853 23043163 -117273602 - AluSx SINE Alu -4 308 1 280 281 12 0 chr10 23043167 23043249 -117273516 + MIR SINE MIR 102 184 -78 362 207 0 35 chr10 23043475 23043562 -117273203 - FLAM SINE Alu -1 132 49 1687 168 3 13 chr10 23043812 23044110 -117272655 + AluJo SINE Alu 1 295 -17 394 240 20 60 chr10 23044354 23044504 -117272261 - MIR3 SINE MIR -30 178 35 982 216 19 9 chr10 23044706 23044919 -117271846 - MER58B DNA MER1_type 0 341 127 811 153 42 58 chr10 23044929 23045118 -117271647 - AluJo SINE Alu 0 312 127 2046 116 42 0 chr10 23045138 23045422 -117271343 + AluSx SINE Alu 1 296 -16 1846 176 10 0 chr10 23046550 23046846 -117269919 - AluJo SINE Alu -13 299 1 314 250 0 0 chr10 23047143 23047207 -117269558 + MER91 DNA MER1_type 127 190 0 240 221 12 58 chr10 23047285 23047371 -117269394 + MLT1K LTR MaLR 486 567 -21 2411 93 0 0 chr10 23048575 23048876 -117267889 - AluSg SINE Alu -9 301 1 2211 113 0 0 chr10 23048880 23049217 -117267548 - AluSq SINE Alu 0 313 3 461 273 99 12 chr10 23049745 23049906 -117266859 - MER5B DNA MER1_type -3 175 1 3268 165 32 19 chr10 23050081 23050675 -117266090 + LTR26 LTR ERV1 1 602 -1 190 115 39 19 chr10 23051531 23051583 -117265182 + T-rich Low_complexity Low_complexity 3 55 0 1634 159 11 39 chr10 23051620 23051903 -117264862 - AluJo SINE Alu -33 279 5 22 0 0 0 chr10 23051910 23051932 -117264833 + AT_rich Low_complexity Low_complexity 1 22 0 442 253 108 6 chr10 23052368 23052526 -117264239 + MER63A DNA MER1_type 1 174 -36 551 284 51 33 chr10 23052534 23052814 -117263951 + LTR16A LTR ERVL 164 490 -1 2456 98 0 0 chr10 23052883 23053188 -117263577 - AluSx SINE Alu -7 305 1 1506 147 105 0 chr10 23053399 23053665 -117263100 + AluJo SINE Alu 1 294 -18 1857 146 121 34 chr10 23054038 23054511 -117262254 - MER69 DNA AcHobo 0 2526 2013 485 280 69 26 chr10 23054489 23054678 -117262087 - MER69 DNA AcHobo -641 585 389 * 2544 62 7 0 chr10 23055026 23055335 -117261430 - AluY SINE Alu 0 311 1 388 308 34 27 chr10 23056298 23056444 -117260321 + LTR67 LTR ERVL 4 150 -407 771 283 118 33 chr10 23056577 23056825 -117259940 - LTR16C LTR ERVL -12 479 189 1275 189 55 120 chr10 23056825 23057242 -117259523 + MLT1B LTR MaLR 1 390 0 771 283 118 33 chr10 23057242 23057357 -117259408 - LTR16C LTR ERVL -302 189 85 527 191 84 0 chr10 23057515 23057646 -117259119 + LTR67 LTR ERVL 411 552 -5 612 267 113 39 chr10 23057818 23058207 -117258558 + L1ME4a LINE L1 5582 5999 -122 3030 182 39 20 chr10 23059111 23059536 -117257229 - LTR26E LTR ERV1 0 622 180 2251 131 0 0 chr10 23059536 23059848 -117256917 - AluSx SINE Alu 0 312 1 3030 182 39 20 chr10 23059848 23060032 -117256733 - LTR26E LTR ERV1 -442 180 1 824 250 74 46 chr10 23060108 23060392 -117256373 + LTR33 LTR ERVL 38 329 -192 3926 138 25 0 chr10 23060532 23061120 -117255645 - LTR26 LTR ERV1 0 603 1 408 303 28 0 chr10 23061120 23061262 -117255503 - MLT1J2 LTR MaLR -52 398 253 629 224 25 25 chr10 23061295 23061456 -117255309 - MLT1J2 LTR MaLR -281 169 9 313 306 81 8 chr10 23061614 23061738 -117255027 - MLT1J LTR MaLR -146 365 233 610 66 11 44 chr10 23061862 23061953 -117254812 - MER53 DNA DNA 0 189 102 241 333 0 0 chr10 23062040 23062118 -117254647 - MLT1L LTR MaLR -537 78 1 421 348 29 22 chr10 23062128 23062401 -117254364 + MLT1L LTR MaLR 210 484 -131 2176 121 7 7 chr10 23062684 23062989 -117253776 + AluSq SINE Alu 1 305 -8 1777 164 33 7 chr10 23063771 23064075 -117252690 + AluJb SINE Alu 1 312 0 296 172 66 25 chr10 23064583 23064705 -117252060 + (TA)n Simple_repeat Simple_repeat 1 127 0 241 194 54 31 chr10 23064734 23064863 -117251902 + (TA)n Simple_repeat Simple_repeat 1 132 0 242 208 56 28 chr10 23065612 23065684 -117251081 - MIR SINE MIR -20 242 169 309 113 14 28 chr10 23066705 23066776 -117249989 + (TA)n Simple_repeat Simple_repeat 2 71 0 201 241 0 0 chr10 23066937 23066991 -117249774 + GA-rich Low_complexity Low_complexity 3 56 0 664 195 0 27 chr10 23067040 23067225 -117249540 + (CA)n Simple_repeat Simple_repeat 1 180 0 229 330 9 0 chr10 23067283 23067392 -117249373 - L1ME4a LINE L1 -21 6100 5991 985 162 7 0 chr10 23067729 23067883 -117248882 + FRAM SINE Alu 1 146 -30 593 228 43 5 chr10 23068023 23068207 -117248558 - MER69 DNA AcHobo -57 2469 2279 1763 174 0 34 chr10 23068217 23068545 -117248220 - AluJb SINE Alu 0 318 1 1160 286 70 15 chr10 23068548 23068947 -117247818 - MER69 DNA AcHobo -1974 552 132 858 113 0 0 chr10 23068948 23069063 -117247702 + AluSg SINE Alu 1 115 -195 2191 139 0 0 chr10 23069065 23069375 -117247390 + AluSg SINE Alu 1 310 0 1499 87 0 5 chr10 23069383 23069578 -117247187 + AluSg SINE Alu 104 297 -15 407 185 185 0 chr10 23069578 23069697 -117247068 - MER69 DNA AcHobo -1085 141 1 475 319 31 12 chr10 23070125 23070288 -117246477 + MIR SINE MIR 20 185 -77 721 264 81 65 chr10 23071149 23071683 -117245082 - MER34 LTR ERV1 0 542 1 25 65 0 0 chr10 23071802 23071848 -117244917 + AT_rich Low_complexity Low_complexity 1 46 0 2462 156 75 22 chr10 23072050 23072487 -117244278 - L1 LINE L1 -1357 4789 4320 2235 110 7 0 chr10 23072487 23072787 -117243978 - AluSq SINE Alu -10 303 2 2462 156 75 22 chr10 23072787 23072854 -117243911 - L1 LINE L1 -1826 4320 4258 * 3658 151 0 2 chr10 23072846 23073450 -117243315 + L1 LINE L1 4764 5366 -780 1731 156 11 3 chr10 23073453 23073735 -117243030 + AluJo SINE Alu 5 288 -24 832 108 58 7 chr10 23073742 23073881 -117242884 + L1MA9 LINE L1 6161 6306 -6 2051 131 7 0 chr10 23074074 23074364 -117242401 - AluSx SINE Alu -4 308 17 1414 173 0 0 chr10 23074765 23074985 -117241780 - AluSq SINE Alu -93 220 1 705 223 0 0 chr10 23074995 23075125 -117241640 - FLAM_C SINE Alu 0 133 4 215 181 21 32 chr10 23075223 23075317 -117241448 + CT-rich Low_complexity Low_complexity 2 94 0 274 204 9 37 chr10 23075372 23075480 -117241285 + CT-rich Low_complexity Low_complexity 2 106 0 1547 155 44 44 chr10 23075940 23076237 -117240528 - AluJo SINE Alu -11 301 5 781 158 30 8 chr10 23076239 23076372 -117240393 - AluJo SINE Alu -175 137 2 2267 117 0 0 chr10 23076548 23076855 -117239910 - AluSg SINE Alu -3 307 1 1167 139 28 0 chr10 23077088 23077303 -117239462 - AluSp SINE Alu -12 301 81 200 222 0 16 chr10 23077561 23077624 -117239141 + T-rich Low_complexity Low_complexity 1 62 0 931 96 0 22 chr10 23078547 23078682 -117238083 + FLAM_C SINE Alu 1 132 -1 7371 125 28 6 chr10 23078979 23079147 -117237618 - L1MA3 LINE L1 0 7724 7561 2210 130 0 0 chr10 23079147 23079446 -117237319 - AluSq SINE Alu -14 299 1 7371 125 28 6 chr10 23079446 23081515 -117235250 - L1MA3 LINE L1 -163 7561 5438 * 11920 145 26 1 chr10 23081492 23083338 -117233427 - L1MA3 LINE L1 -5657 1908 15 1319 27 0 22 chr10 23084040 23084224 -117232541 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1621 209 3 3 chr10 23084526 23084837 -117231928 - AluJo SINE Alu -1 311 1 339 255 112 81 chr10 23085337 23085498 -117231267 + MLT1I LTR MaLR 244 409 0 1758 186 0 0 chr10 23085522 23085812 -117230953 + AluJb SINE Alu 1 290 -22 201 247 216 10 chr10 23086101 23086198 -117230567 + MIR SINE MIR 35 151 -111 226 352 80 0 chr10 23086586 23086711 -117230054 + MIR SINE MIR 20 154 -108 2130 130 0 0 chr10 23086988 23087288 -117229477 - AluSx SINE Alu -12 300 1 359 279 70 8 chr10 23087485 23087614 -117229151 - L2 LINE L2 0 3272 3136 2456 90 3 0 chr10 23087641 23087952 -117228813 + AluSx SINE Alu 1 312 0 1966 166 17 17 chr10 23088181 23088525 -117228240 + MER49 LTR ERV1 1 344 -579 2867 117 5 7 chr10 23088680 23089089 -117227676 - MER1A DNA MER1_type 0 529 122 799 333 32 3 chr10 23089144 23089426 -117227339 - L2 LINE L2 -571 2743 2454 1746 157 54 0 chr10 23089451 23089731 -117227034 - AluJb SINE Alu -17 295 1 203 204 0 19 chr10 23089862 23089916 -117226849 + (TA)n Simple_repeat Simple_repeat 1 53 0 247 234 21 43 chr10 23089917 23090011 -117226754 + L1MC4 LINE L1 6614 6705 -1337 741 144 27 0 chr10 23090024 23090325 -117226440 + (TA)n Simple_repeat Simple_repeat 1 309 0 369 0 0 0 chr10 23090392 23090433 -117226332 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 252 0 0 0 chr10 23090474 23090502 -117226263 + (GACTG)n Simple_repeat Simple_repeat 4 31 0 2139 174 62 8 chr10 23090599 23090985 -117225780 + MSTB LTR MaLR 20 426 0 1902 150 0 10 chr10 23091396 23091690 -117225075 + AluJo SINE Alu 1 291 -21 1708 138 87 0 chr10 23091722 23091998 -117224767 - AluSx SINE Alu -12 300 1 2283 115 0 10 chr10 23092720 23093032 -117223733 - AluSx SINE Alu -3 309 1 748 267 36 24 chr10 23093193 23093440 -117223325 - MIR SINE MIR 0 262 13 2231 110 0 0 chr10 23093557 23093888 -117222877 - AluSx SINE Alu 0 312 1 2092 130 0 0 chr10 23093997 23094282 -117222483 - AluSx SINE Alu -19 293 9 641 148 0 0 chr10 23094399 23094507 -117222258 + AluSg/x SINE Alu 202 309 -3 306 266 9 126 chr10 23094657 23094787 -117221978 - MER5A DNA MER1_type 0 189 92 2413 84 3 0 chr10 23094787 23095085 -117221680 - AluSp SINE Alu -14 299 1 306 266 9 126 chr10 23095085 23095168 -117221597 - MER5A DNA MER1_type -97 92 1 1227 137 0 0 chr10 23095747 23095922 -117220843 - AluSq SINE Alu -138 175 1 180 321 84 46 chr10 23095928 23096059 -117220706 + MER5B DNA MER1_type 41 176 -2 1526 145 83 18 chr10 23096957 23097233 -117219532 - AluJo SINE Alu -17 295 2 494 61 0 0 chr10 23097234 23097300 -117219465 - L1 LINE L1 -1823 4323 4258 * 3658 151 0 2 chr10 23097292 23097896 -117218869 + L1 LINE L1 4764 5366 -780 1731 156 11 3 chr10 23097899 23098181 -117218584 + AluJo SINE Alu 5 288 -24 832 108 58 7 chr10 23098188 23098327 -117218438 + L1MA9 LINE L1 6161 6306 -6 2051 131 7 0 chr10 23098520 23098810 -117217955 - AluSx SINE Alu -4 308 17 948 102 0 22 chr10 23099185 23099322 -117217443 + AluJo SINE Alu 1 134 -178 2139 174 62 8 chr10 23099770 23100156 -117216609 - MSTB LTR MaLR 0 426 20 252 0 0 0 chr10 23100253 23100281 -117216484 + (CAGTC)n Simple_repeat Simple_repeat 4 31 0 369 0 0 0 chr10 23100322 23100363 -117216402 + (TCTA)n Simple_repeat Simple_repeat 2 42 0 741 144 27 0 chr10 23100429 23100731 -117216034 + (TA)n Simple_repeat Simple_repeat 1 310 0 247 234 21 43 chr10 23100744 23100838 -117215927 - L1MC4 LINE L1 -1337 6705 6614 203 204 0 19 chr10 23100839 23100893 -117215872 + (TA)n Simple_repeat Simple_repeat 2 54 0 1719 161 54 0 chr10 23101024 23101304 -117215461 + AluJb SINE Alu 1 295 -17 799 333 32 3 chr10 23101329 23101611 -117215154 + L2 LINE L2 2454 2743 -571 2867 117 5 7 chr10 23101666 23102075 -117214690 + MER1A DNA MER1_type 122 529 0 1966 166 17 17 chr10 23102230 23102574 -117214191 - MER49 LTR ERV1 -579 344 1 1495 141 3 141 chr10 23102803 23102991 -117213774 - AluJo SINE Alu 0 312 100 207 0 0 0 chr10 23102991 23103014 -117213751 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2048 125 0 7 chr10 23103014 23103301 -117213464 - AluSx SINE Alu -27 285 1 1495 141 3 141 chr10 23103301 23103473 -117213292 - AluJo SINE Alu -210 102 1 1075 147 80 46 chr10 23103745 23103855 -117212910 - L1MA4A LINE L1 -2 6301 6196 2319 118 3 0 chr10 23103855 23104159 -117212606 - AluSx SINE Alu -7 305 1 1075 147 80 46 chr10 23104159 23104286 -117212479 - L1MA4A LINE L1 -107 6196 6056 1485 177 0 93 chr10 23104714 23104877 -117211888 - MLT1D LTR MaLR -192 313 197 3869 123 36 2 chr10 23104877 23105460 -117211305 - LTR26 LTR ERV1 0 603 1 1485 177 0 93 chr10 23105460 23105641 -117211124 - MLT1D LTR MaLR -308 197 1 191 261 261 13 chr10 23106142 23106299 -117210466 + L2 LINE L2 3117 3312 -1 2342 64 3 0 chr10 23106729 23107072 -117209693 + AluY SINE Alu 1 344 0 644 200 7 37 chr10 23107278 23107413 -117209352 - FLAM_A SINE Alu 0 142 12 1931 116 11 14 chr10 23107475 23107760 -117209005 + AluSx SINE Alu 27 310 -2 483 171 0 0 chr10 23107917 23107993 -117208772 - AluJ/FRAM SINE Alu -20 292 217 225 94 0 0 chr10 23108020 23108052 -117208713 + (A)n Simple_repeat Simple_repeat 1 32 0 702 172 78 0 chr10 23108056 23108184 -117208581 + AluJo SINE Alu 6 143 -169 2805 85 3 0 chr10 23109007 23109411 -117207354 - L1PA2 LINE L1 0 6155 5770 1950 160 3 10 chr10 23109424 23109737 -117207028 - AluJb SINE Alu -1 311 1 2338 122 75 0 chr10 23110220 23110596 -117206169 - L1MA9 LINE L1 -374 5938 5535 2300 110 0 3 chr10 23110842 23111141 -117205624 + AluSx SINE Alu 1 298 -14 22 0 0 0 chr10 23112663 23112685 -117204080 + AT_rich Low_complexity Low_complexity 1 22 0 248 121 0 0 chr10 23112685 23112718 -117204047 + Alu SINE Alu 1 33 -269 223 242 17 75 chr10 23113055 23113175 -117203590 + C-rich Low_complexity Low_complexity 5 117 0 318 260 22 50 chr10 23113177 23113358 -117203407 + (CCCCG)n Simple_repeat Simple_repeat 3 178 0 230 256 30 45 chr10 23113445 23113578 -117203187 + C-rich Low_complexity Low_complexity 3 133 0 896 156 9 85 chr10 23113759 23113983 -117202782 - AluJo SINE Alu -105 207 1 1009 159 53 43 chr10 23114276 23114483 -117202282 + MER3 DNA MER1_type 1 209 0 1319 157 25 103 chr10 23114760 23114896 -117201869 + AluYb8 SINE Alu 3 148 -170 2148 114 0 3 chr10 23114896 23115202 -117201563 + AluSx SINE Alu 1 305 -7 1319 157 25 103 chr10 23115202 23115384 -117201381 + AluYb8 SINE Alu 148 296 -22 328 200 0 15 chr10 23115666 23115731 -117201034 - MER82 DNA MER2_type -580 73 10 1869 158 0 3 chr10 23115739 23116037 -117200728 + AluSx SINE Alu 9 305 -7 679 231 30 0 chr10 23116124 23116258 -117200507 + LTR16C LTR ERVL 146 283 -208 1090 202 20 0 chr10 23116259 23116462 -117200303 + MER58A DNA MER1_type 2 208 -16 683 198 198 0 chr10 23116475 23116657 -117200108 + LTR16C LTR ERVL 274 491 0 1659 181 8 77 chr10 23116795 23116954 -117199811 + MLT1A1 LTR MaLR 1 169 -196 1987 108 63 0 chr10 23116954 23117241 -117199524 + AluSx SINE Alu 6 310 -2 1659 181 8 77 chr10 23117241 23117446 -117199319 + MLT1A1 LTR MaLR 169 340 -25 261 0 0 0 chr10 23117446 23117475 -117199290 + (T)n Simple_repeat Simple_repeat 1 29 0 460 214 39 65 chr10 23118041 23118085 -117198680 + MIR SINE MIR 113 157 -105 2368 200 10 79 chr10 23118085 23118189 -117198576 + MER87 LTR ERV1 1 111 -430 2241 97 0 0 chr10 23118189 23118489 -117198276 - AluSq SINE Alu -13 300 1 2368 200 10 79 chr10 23118489 23118965 -117197800 + MER87 LTR ERV1 111 541 0 460 214 39 65 chr10 23118965 23119074 -117197691 + MIR SINE MIR 157 262 0 1624 172 47 0 chr10 23120497 23120793 -117195972 - AluJb SINE Alu -2 310 1 437 259 68 132 chr10 23122039 23122579 -117194186 - MLT1K LTR MaLR -37 551 46 1461 125 0 26 chr10 23122868 23123100 -117193665 + AluSg/x SINE Alu 85 310 -2 830 235 6 0 chr10 23123137 23123307 -117193458 + MIR SINE MIR 92 262 0 1751 126 0 30 chr10 23123313 23123445 -117193320 - AluSq SINE Alu -52 261 140 2173 109 0 0 chr10 23123445 23123749 -117193016 - AluSq SINE Alu -9 304 1 1751 126 0 30 chr10 23123749 23123885 -117192880 - AluSq SINE Alu -173 140 1 708 186 0 0 chr10 23123912 23124030 -117192735 - FRAM SINE Alu -58 118 1 400 253 48 27 chr10 23124044 23124190 -117192575 + LTR16C LTR ERVL 341 489 -2 2207 75 0 0 chr10 23124286 23124567 -117192198 - AluY SINE Alu -29 282 2 326 272 71 65 chr10 23124675 23124844 -117191921 - MIR SINE MIR -21 241 72 1720 195 65 24 chr10 23125064 23125329 -117191436 + MER63B DNA MER1_type 1 291 -771 1511 184 0 27 chr10 23125329 23125623 -117191142 - AluJo SINE Alu -26 286 1 1720 195 65 24 chr10 23125623 23125772 -117190993 + MER63B DNA MER1_type 291 432 -4 1806 151 7 0 chr10 23125804 23126089 -117190676 + AluSx SINE Alu 1 287 -25 2177 68 51 3 chr10 23126161 23126454 -117190311 - AluSg SINE Alu -3 307 1 734 214 107 41 chr10 23126534 23126730 -117190035 + MER3 DNA MER1_type 1 209 0 933 177 17 0 chr10 23127557 23127732 -117189033 + AluSg/x SINE Alu 133 310 -2 1526 169 59 0 chr10 23127746 23128018 -117188747 + AluJo SINE Alu 1 288 -24 2157 108 0 3 chr10 23128323 23128620 -117188145 + AluSq SINE Alu 1 296 -17 1721 112 93 0 chr10 23128953 23129222 -117187543 + AluSx SINE Alu 1 294 -18 417 39 0 0 chr10 23129487 23129538 -117187227 + (CA)n Simple_repeat Simple_repeat 2 52 0 387 0 0 0 chr10 23129837 23129880 -117186885 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 736 111 0 0 chr10 23130248 23130347 -117186418 - AluS SINE Alu -213 100 2 816 148 0 7 chr10 23130450 23130585 -117186180 + AluJb SINE Alu 85 218 -94 242 170 0 19 chr10 23130585 23130638 -117186127 + FAM SINE Alu 125 176 -3 1433 186 0 39 chr10 23130648 23130960 -117185805 + AluJo SINE Alu 1 300 -12 1091 117 0 6 chr10 23131306 23131488 -117185277 - AluSg/x SINE Alu 0 304 124 1990 102 25 0 chr10 23131499 23131773 -117184992 - AluY SINE Alu -30 281 1 255 280 204 0 chr10 23131911 23132004 -117184761 + L2 LINE L2 3149 3260 -12 1064 224 86 4 chr10 23132005 23132260 -117184505 + L1ME1 LINE L1 5487 5762 -404 630 143 0 0 chr10 23132280 23132371 -117184394 + AluJ/FLAM SINE Alu 2 92 -220 1327 142 77 31 chr10 23132371 23132631 -117184134 + AluJo SINE Alu 30 301 -11 1024 184 32 28 chr10 23132632 23132646 -117184119 + L1ME1 LINE L1 5776 5788 -378 2261 130 122 10 chr10 23132646 23133031 -117183734 + MSTA LTR MaLR 1 428 0 1024 184 32 28 chr10 23133031 23133234 -117183531 + L1ME1 LINE L1 5788 5994 -172 303 327 0 35 chr10 23133254 23133367 -117183398 - MLT1J LTR MaLR -99 412 304 726 190 2 7 chr10 23133372 23133521 -117183244 - L1MB4 LINE L1 -130 6038 5889 1221 147 0 15 chr10 23133871 23134068 -117182697 - AluJb SINE Alu -34 278 85 3638 151 10 16 chr10 23134179 23134790 -117181975 - L1MB3 LINE L1 -259 5924 5318 843 211 6 0 chr10 23134795 23134970 -117181795 - FRAM SINE Alu 0 176 1 1216 218 26 53 chr10 23134970 23135350 -117181415 - L1MB3 LINE L1 -820 5326 4957 239 103 13 51 chr10 23135359 23135437 -117181328 + (TTTTA)n Simple_repeat Simple_repeat 3 77 0 199 26 0 79 chr10 23135502 23135540 -117181225 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1952 146 3 0 chr10 23135560 23135855 -117180910 + AluSx SINE Alu 1 296 -16 3224 88 20 24 chr10 23135876 23136331 -117180434 + MLT2A2 LTR ERVL 1 453 0 1845 92 81 15 chr10 23136407 23136678 -117180087 + AluSq SINE Alu 1 289 -24 346 209 198 0 chr10 23137239 23137325 -117179440 + MLT1C LTR MaLR 1 103 -364 1507 175 111 47 chr10 23137343 23137686 -117179079 + MLT1A1 LTR MaLR 1 365 0 2089 118 3 0 chr10 23138452 23138749 -117178016 + AluSp SINE Alu 1 298 -15 951 125 0 7 chr10 23138758 23138902 -117177863 + AluSp SINE Alu 1 143 -170 215 336 48 40 chr10 23139906 23140031 -117176734 + L2 LINE L2 3144 3269 -3 2176 84 9 37 chr10 23140360 23140682 -117176083 + AluSq SINE Alu 1 313 0 2314 71 3 0 chr10 23141678 23141972 -117174793 + AluY SINE Alu 1 295 -16 1721 112 93 0 chr10 23142304 23142573 -117174192 + AluSx SINE Alu 1 294 -18 417 39 0 0 chr10 23142838 23142889 -117173876 + (CA)n Simple_repeat Simple_repeat 2 52 0 387 0 0 0 chr10 23143188 23143231 -117173534 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1866 159 0 10 chr10 23143862 23144176 -117172589 + AluJb SINE Alu 1 311 -1 2617 80 42 13 chr10 23144187 23144573 -117172192 + L1PA15 LINE L1 5768 6164 -1 1608 130 0 20 chr10 23145238 23145492 -117171273 - AluSx SINE Alu -6 306 58 300 135 38 38 chr10 23145817 23145964 -117170801 + GA-rich Low_complexity Low_complexity 1 147 0 28 48 0 0 chr10 23145985 23146027 -117170738 + AT_rich Low_complexity Low_complexity 1 42 0 1085 124 20 50 chr10 23146113 23146314 -117170451 - AluSg/x SINE Alu -15 295 101 1181 392 7 33 chr10 23146314 23146620 -117170145 + AluJo SINE Alu 3 300 -2 223 265 0 29 chr10 23146772 23146840 -117169925 + (CATA)n Simple_repeat Simple_repeat 4 69 0 829 186 0 2 chr10 23147004 23147240 -117169525 + AluJo SINE Alu 5 275 -37 1083 36 42 12 chr10 23147244 23147412 -117169353 + (GAAA)n Simple_repeat Simple_repeat 2 174 0 2510 68 0 0 chr10 23147412 23147723 -117169042 + AluY SINE Alu 1 311 0 546 266 6 19 chr10 23147809 23147967 -117168798 - MIR SINE MIR -33 229 74 736 179 0 8 chr10 23148115 23148249 -117168516 - FLAM_C SINE Alu 0 133 1 2183 102 0 0 chr10 23148792 23149087 -117167678 - AluSx SINE Alu -17 295 1 2161 123 0 0 chr10 23149253 23149555 -117167210 - AluSx SINE Alu -8 304 3 2314 79 3 3 chr10 23149802 23150105 -117166660 - AluSp SINE Alu -10 303 1 1517 173 14 14 chr10 23150257 23150546 -117166219 - AluJo SINE Alu -23 289 1 2364 70 0 16 chr10 23150670 23150984 -117165781 - AluY SINE Alu -2 309 1 1903 138 10 0 chr10 23151372 23151670 -117165095 + AluJb SINE Alu 1 301 -11 767 191 0 0 chr10 23151932 23152063 -117164702 + FLAM_A SINE Alu 1 131 -2 2110 84 11 0 chr10 23152650 23152935 -117163830 + AluSq SINE Alu 1 288 -25 292 282 47 0 chr10 23152946 23153031 -117163734 + L2 LINE L2 2707 2795 -519 255 61 0 0 chr10 23153244 23153277 -117163488 + (TCCCC)n Simple_repeat Simple_repeat 5 37 0 192 129 65 0 chr10 23153369 23153400 -117163365 + MIR SINE MIR 222 254 -8 1770 145 28 3 chr10 23153786 23154075 -117162690 - AluJo SINE Alu -16 296 1 230 228 123 0 chr10 23154233 23154290 -117162475 + MLT1K LTR MaLR 502 565 -23 336 283 88 25 chr10 23154740 23154899 -117161866 - MIR SINE MIR 0 262 94 561 177 11 33 chr10 23154905 23155086 -117161679 + CT-rich Low_complexity Low_complexity 2 178 0 22 0 0 0 chr10 23155419 23155441 -117161324 + AT_rich Low_complexity Low_complexity 1 22 0 1457 199 7 17 chr10 23155798 23155935 -117160830 + AluJo SINE Alu 1 138 -174 1855 118 0 14 chr10 23155935 23156214 -117160551 + AluSx SINE Alu 23 297 -15 1457 199 7 17 chr10 23156214 23156378 -117160387 + AluJo SINE Alu 138 299 -13 830 141 0 0 chr10 23156665 23156786 -117159979 - AluSg/x SINE Alu -60 252 132 1500 134 5 0 chr10 23156786 23157009 -117159756 - AluSx SINE Alu -88 224 1 2032 102 0 0 chr10 23157686 23157960 -117158805 + AluSx SINE Alu 21 294 -18 315 113 0 0 chr10 23159491 23159544 -117157221 + (A)n Simple_repeat Simple_repeat 1 53 0 2039 96 33 7 chr10 23161104 23161406 -117155359 - AluSg SINE Alu 0 310 1 2178 120 0 0 chr10 23161507 23161815 -117154950 - AluSx SINE Alu -4 308 1 3719 142 87 22 chr10 23162031 23162770 -117153995 - LTR48 LTR ERV1 0 787 1 561 274 44 0 chr10 23163046 23163181 -117153584 - MER58B DNA MER1_type -1 340 200 2089 106 0 3 chr10 23163892 23164184 -117152581 + AluSg1 SINE Alu 1 291 -18 294 143 0 0 chr10 23164188 23164237 -117152528 + (TA)n Simple_repeat Simple_repeat 2 50 0 402 156 26 0 chr10 23164691 23164768 -117151997 + AluSp/q SINE Alu 225 303 0 562 131 19 0 chr10 23164770 23164877 -117151888 - L1MA4A LINE L1 -231 6072 5964 2123 65 43 0 chr10 23165222 23165500 -117151265 - AluY SINE Alu -20 291 2 968 147 147 0 chr10 23165524 23165701 -117151064 - AluJo SINE Alu -26 286 84 917 335 64 22 chr10 23166016 23166467 -117150298 + L3b LINE CR1 1111 1580 -3 325 247 124 0 chr10 23167380 23167477 -117149288 + L2 LINE L2 3189 3297 -16 1477 158 40 0 chr10 23167506 23167759 -117149006 - AluJo SINE Alu -49 263 1 1546 211 63 0 chr10 23168464 23168795 -117147970 - L1PB4 LINE L1 -17 6139 5788 1540 32 0 11 chr10 23168795 23168983 -117147782 - AluY SINE Alu -12 299 114 322 116 0 0 chr10 23169084 23169127 -117147638 - Alu SINE Alu -257 44 2 2008 129 0 0 chr10 23169127 23169421 -117147344 - AluSg SINE Alu -16 294 1 527 251 89 17 chr10 23169476 23169655 -117147110 - MIR SINE MIR -1 261 70 537 233 95 42 chr10 23169701 23169963 -117146802 - L1MC5 LINE L1 -369 7592 7317 274 183 0 70 chr10 23169979 23170050 -117146715 - L1MC5 LINE L1 -2362 5446 5381 1643 187 0 0 chr10 23170062 23170351 -117146414 - AluSx SINE Alu -21 291 3 2118 82 0 23 chr10 23170757 23171060 -117145705 - AluY SINE Alu -15 296 1 1658 146 25 55 chr10 23171929 23172284 -117144481 - MER4A LTR ERV1 0 664 262 609 133 10 10 chr10 23172285 23172383 -117144382 - MER4A LTR ERV1 -566 98 1 800 200 19 0 chr10 23172535 23172690 -117144075 - FRAM SINE Alu -15 161 4 1860 127 0 37 chr10 23173371 23173695 -117143070 - AluSx SINE Alu 0 312 1 957 180 172 27 chr10 23173805 23174066 -117142699 + MER46C DNA MER2_type 12 310 -28 4048 91 0 30 chr10 23174067 23174455 -117142310 - MER41A LTR ERV1 -1 553 186 2209 83 0 35 chr10 23174455 23174768 -117141997 - AluSx SINE Alu -10 302 1 4048 91 0 30 chr10 23174768 23174949 -117141816 - MER41A LTR ERV1 -368 186 1 199 200 60 0 chr10 23175271 23175321 -117141444 + L2 LINE L2 3261 3313 0 1713 203 27 25 chr10 23175702 23176107 -117140658 + L1MC1 LINE L1 5922 6327 -6 200 200 0 0 chr10 23176113 23176148 -117140617 + A-rich Low_complexity Low_complexity 2 36 0 703 195 0 0 chr10 23176150 23176273 -117140492 + FLAM_A SINE Alu 1 123 -10 1951 114 32 23 chr10 23176696 23177004 -117139761 + AluSx SINE Alu 1 311 -1 487 232 30 0 chr10 23177752 23177830 -117138935 + MER58B DNA MER1_type 1 84 -257 1832 135 34 3 chr10 23177830 23178126 -117138639 - AluSx SINE Alu -7 305 1 487 232 30 0 chr10 23178126 23178146 -117138619 + MER58B DNA MER1_type 84 102 -239 829 153 42 58 chr10 23178146 23178335 -117138430 + AluJo SINE Alu 127 312 0 979 216 19 9 chr10 23178345 23178558 -117138207 + MER58B DNA MER1_type 127 341 0 462 240 20 60 chr10 23178760 23178910 -117137855 + MIR3 SINE MIR 35 178 -30 1581 168 3 13 chr10 23179154 23179452 -117137313 - AluJo SINE Alu -17 295 1 366 207 0 35 chr10 23179702 23179789 -117136976 + FLAM SINE Alu 49 132 -1 316 281 12 0 chr10 23180015 23180097 -117136668 - MIR SINE MIR -78 184 102 2177 113 0 3 chr10 23180101 23180410 -117136355 + AluSx SINE Alu 1 308 -4 850 159 0 0 chr10 23180461 23180599 -117136166 - AluJb SINE Alu -9 303 166 1440 160 0 4 chr10 23180699 23180936 -117135829 + AluSg/x SINE Alu 71 306 -6 2126 86 0 71 chr10 23180937 23181263 -117135502 + AluSp SINE Alu 1 303 -10 447 279 171 8 chr10 23181286 23181544 -117135221 - LTR16C LTR ERVL -4 487 188 901 212 4 85 chr10 23181621 23181844 -117134921 - MLT1E LTR MaLR -30 563 360 1293 113 0 49 chr10 23181844 23182048 -117134717 + Tigger2a DNA MER2_type 1 194 -240 48 0 0 0 chr10 23182048 23182096 -117134669 + AT_rich Low_complexity Low_complexity 1 48 0 352 115 52 21 chr10 23182100 23182175 -117134590 + Tigger2a DNA MER2_type 193 273 -2445 1864 146 0 0 chr10 23182175 23182462 -117134303 + AluSx SINE Alu 1 287 -25 352 115 52 21 chr10 23182462 23182482 -117134283 + Tigger2a DNA MER2_type 273 291 -153 1019 187 21 11 chr10 23182489 23182676 -117134089 + Tigger2a DNA MER2_type 256 444 0 740 245 224 14 chr10 23182678 23182968 -117133797 - MLT1E LTR MaLR -240 353 3 209 302 0 0 chr10 23183505 23183558 -117133207 - L3 LINE CR1 -186 1391 1339 223 349 71 75 chr10 23183643 23183898 -117132867 - L3 LINE CR1 -483 1094 841 231 361 108 8 chr10 23184151 23184281 -117132484 - MIR SINE MIR -70 192 50 1519 167 20 27 chr10 23184287 23184587 -117132178 - AluJo SINE Alu -3 309 12 846 129 62 33 chr10 23184604 23184637 -117132128 - L1MA9 LINE L1 -1 6299 6268 2011 87 20 47 chr10 23184637 23184935 -117131830 + AluY SINE Alu 2 291 -20 846 129 62 33 chr10 23184935 23185075 -117131690 - L1MA9 LINE L1 -32 6268 6127 1054 110 0 0 chr10 23185075 23185229 -117131536 + AluSq SINE Alu 1 154 -159 1397 112 0 0 chr10 23185330 23185527 -117131238 + AluSg/x SINE Alu 106 302 -8 1871 151 3 28 chr10 23185983 23186301 -117130464 - AluJo SINE Alu -2 310 1 266 143 0 0 chr10 23186635 23186677 -117130088 + L1MB3 LINE L1 5398 5439 -744 2182 87 7 0 chr10 23186684 23186970 -117129795 + AluSx SINE Alu 6 293 -19 405 143 0 0 chr10 23187011 23187074 -117129691 + Alu SINE Alu 234 296 -16 3761 143 19 36 chr10 23187080 23187489 -117129276 + L1MB3 LINE L1 5435 5829 -354 2187 98 13 0 chr10 23187489 23187796 -117128969 + AluSp SINE Alu 1 311 -2 3761 143 19 36 chr10 23187796 23188076 -117128689 + L1MB3 LINE L1 5829 6112 -71 2182 101 13 0 chr10 23188137 23188263 -117128502 + AluSx SINE Alu 1 124 -188 225 0 0 0 chr10 23188263 23188288 -117128477 + (CA)n Simple_repeat Simple_repeat 2 26 0 2182 101 13 0 chr10 23188288 23188467 -117128298 + AluSx SINE Alu 124 310 -2 1615 193 0 0 chr10 23189266 23189567 -117127198 - AluJo SINE Alu -11 301 1 26 30 0 0 chr10 23189719 23189752 -117127013 + AT_rich Low_complexity Low_complexity 1 33 0 332 316 97 65 chr10 23189752 23190164 -117126601 - L1M4 LINE L1 -1529 4617 4193 189 0 0 0 chr10 23190694 23190715 -117126050 + (T)n Simple_repeat Simple_repeat 1 21 0 1141 118 0 0 chr10 23191087 23191248 -117125517 + AluSp SINE Alu 137 297 -16 1009 208 95 0 chr10 23191249 23191480 -117125285 - L1PB4 LINE L1 -12 6144 5892 194 263 70 0 chr10 23191590 23191647 -117125118 - MIR SINE MIR -70 192 132 462 224 42 55 chr10 23191673 23191838 -117124927 + MER31B LTR ERV1 17 179 -287 2289 80 0 10 chr10 23191979 23192281 -117124484 - AluSq SINE Alu -14 299 1 2288 96 0 0 chr10 23192281 23192582 -117124183 - AluSc SINE Alu -8 301 1 50 31 0 0 chr10 23192715 23192779 -117123986 + AT_rich Low_complexity Low_complexity 1 64 0 5642 22 1 1 chr10 23192964 23193909 -117122856 - L1PA3 LINE L1 -244 5911 4967 978 19 0 0 chr10 23193911 23194018 -117122747 - U6 snRNA snRNA 0 107 1 1557 155 19 11 chr10 23194135 23194300 -117122465 - AluJb SINE Alu -10 302 133 2075 126 3 0 chr10 23194300 23194602 -117122163 - AluSx SINE Alu -9 303 1 1557 155 19 11 chr10 23194602 23194707 -117122058 - AluJb SINE Alu -179 133 30 2027 105 3 0 chr10 23194818 23195103 -117121662 - AluSx SINE Alu -4 308 23 401 239 10 166 chr10 23195146 23195192 -117121573 + MER5B DNA MER1_type 1 53 -125 2058 112 7 0 chr10 23195192 23195488 -117121277 - AluSq SINE Alu -11 302 5 401 239 10 166 chr10 23195488 23195499 -117121266 + MER5B DNA MER1_type 53 64 -114 2183 115 3 0 chr10 23195499 23195804 -117120961 - AluSx SINE Alu -6 306 1 401 239 10 166 chr10 23195804 23195887 -117120878 + MER5B DNA MER1_type 64 103 -75 2402 49 3 7 chr10 23195887 23196195 -117120570 - AluY SINE Alu -4 307 1 401 239 10 166 chr10 23196195 23196257 -117120508 + MER5B DNA MER1_type 103 173 -5 1399 148 83 18 chr10 23196682 23196959 -117119806 + AluJo SINE Alu 4 298 -14 232 321 84 46 chr10 23197854 23197985 -117118780 - MER5B DNA MER1_type -2 176 41 2134 115 0 0 chr10 23197991 23198295 -117118470 + AluSx SINE Alu 1 304 -8 2087 100 10 7 chr10 23198295 23198595 -117118170 + AluSx SINE Alu 1 301 -11 1110 148 54 31 chr10 23198605 23198828 -117117937 + L1P5 LINE L1 5571 5798 -358 2271 63 3 3 chr10 23198863 23199162 -117117603 + AluY SINE Alu 10 308 -3 1580 205 42 46 chr10 23199212 23199652 -117117113 - LTR8 LTR ERV1 0 727 293 306 0 0 0 chr10 23199662 23199696 -117117069 + (T)n Simple_repeat Simple_repeat 1 34 0 1156 162 83 42 chr10 23200716 23200956 -117115809 - LTR8 LTR ERV1 -415 276 39 2499 62 0 0 chr10 23200956 23201264 -117115501 - AluY SINE Alu -3 308 1 1156 162 83 42 chr10 23201264 23201292 -117115473 - LTR8 LTR ERV1 -652 39 14 1278 198 50 69 chr10 23201314 23201589 -117115176 - MER4D LTR ERV1 0 903 635 1824 153 0 6 chr10 23201589 23201902 -117114863 - AluJb SINE Alu -1 311 1 1278 198 50 69 chr10 23201902 23201989 -117114776 - MER4D LTR ERV1 -268 635 548 254 276 51 31 chr10 23202323 23202421 -117114344 + MIR SINE MIR 27 126 -136 183 114 0 0 chr10 23202421 23202456 -117114309 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 2336 74 3 3 chr10 23202634 23202933 -117113832 + AluSp SINE Alu 1 299 -14 1618 257 124 17 chr10 23203352 23203407 -117113358 - L1M4 LINE L1 -891 5255 5207 1863 147 23 0 chr10 23203407 23203706 -117113059 - AluJo SINE Alu -6 306 1 1618 257 124 17 chr10 23203706 23204304 -117112461 - L1M4 LINE L1 -939 5207 4532 257 155 138 0 chr10 23204344 23204402 -117112363 - L1M4 LINE L1 -1600 4546 4481 940 147 0 0 chr10 23204413 23204563 -117112202 - AluJb SINE Alu -3 309 160 2416 75 3 13 chr10 23204563 23204871 -117111894 - HERVL LTR ERVL -2165 3489 3185 2442 203 60 15 chr10 23204871 23204921 -117111844 - MLT1F1 LTR MaLR -12 555 509 1591 154 95 0 chr10 23204921 23205206 -117111559 - AluJb SINE Alu 0 312 1 2163 125 3 0 chr10 23205206 23205518 -117111247 - AluSq SINE Alu 0 313 1 2442 203 60 15 chr10 23205518 23205997 -117110768 - MLT1F1 LTR MaLR -57 510 1 21 36 0 0 chr10 23206235 23206263 -117110502 + AT_rich Low_complexity Low_complexity 1 28 0 1692 150 0 0 chr10 23206520 23206794 -117109971 - AluSx SINE Alu -6 306 33 319 267 10 30 chr10 23207167 23207201 -117109564 + CT-rich Low_complexity Low_complexity 2 35 -65 2170 91 0 7 chr10 23207201 23207497 -117109268 - AluSg1 SINE Alu -15 294 1 319 267 10 30 chr10 23207497 23207563 -117109202 + CT-rich Low_complexity Low_complexity 35 100 0 704 86 9 0 chr10 23207563 23207668 -117109097 + (TTCC)n Simple_repeat Simple_repeat 4 109 0 1658 192 13 0 chr10 23207684 23207992 -117108773 - AluJo SINE Alu 0 312 1 747 65 0 0 chr10 23208002 23208095 -117108670 - AluY SINE Alu -12 299 207 763 135 84 62 chr10 23208198 23208265 -117108500 + L1MA4A LINE L1 6120 6184 -119 2206 121 0 0 chr10 23208265 23208570 -117108195 + AluSx SINE Alu 1 305 -7 763 135 84 62 chr10 23208570 23208680 -117108085 + L1MA4A LINE L1 6184 6301 -2 1419 130 3 144 chr10 23208952 23209124 -117107641 + AluJo SINE Alu 1 100 -212 1931 125 0 7 chr10 23209124 23209434 -117107331 + AluSx SINE Alu 1 308 0 1419 130 3 144 chr10 23209434 23209614 -117107151 + AluJo SINE Alu 100 304 -8 230 253 192 20 chr10 23209762 23209861 -117106904 + MARNA DNA Mariner 75 190 -396 1110 111 29 0 chr10 23209888 23210060 -117106705 - AluSg/x SINE Alu -13 297 121 409 255 38 0 chr10 23210101 23210207 -117106558 - MARNA DNA Mariner -211 375 266 2244 96 0 6 chr10 23210254 23210568 -117106197 - AluSx SINE Alu 0 312 1 2024 123 7 0 chr10 23210574 23210874 -117105891 - AluSx SINE Alu -10 302 1 1429 218 119 13 chr10 23210875 23211260 -117105505 - MER31B LTR ERV1 -40 426 1 2266 84 3 0 chr10 23212039 23212337 -117104428 - AluSp SINE Alu -14 299 1 776 136 0 8 chr10 23213088 23213206 -117103559 - FRAM SINE Alu -8 168 52 586 188 29 12 chr10 23213243 23213413 -117103352 + CT-rich Low_complexity Low_complexity 1 173 0 240 35 0 0 chr10 23213414 23213443 -117103322 + (TCCC)n Simple_repeat Simple_repeat 3 31 0 530 159 0 167 chr10 23213445 23213751 -117103014 - FLAM_C SINE Alu 0 284 2 1192 226 88 38 chr10 23213966 23214380 -117102385 + MLT1C LTR MaLR 17 451 -16 1625 138 96 0 chr10 23214479 23214739 -117102026 - AluSx SINE Alu -27 285 1 1814 163 0 3 chr10 23214741 23215047 -117101718 - AluJo SINE Alu -7 305 1 2291 78 0 0 chr10 23215060 23215355 -117101410 - AluY SINE Alu -16 295 1 1953 168 7 3 chr10 23216265 23216574 -117100191 + AluJb SINE Alu 1 310 -2 438 278 20 20 chr10 23216759 23216893 -117099872 - MIR SINE MIR -12 250 114 2458 70 0 7 chr10 23216893 23217193 -117099572 + AluSq SINE Alu 1 298 -15 438 278 20 20 chr10 23217193 23217209 -117099556 - MIR SINE MIR -147 115 100 1590 174 65 0 chr10 23217244 23217519 -117099246 + AluJb SINE Alu 4 296 -16 280 271 0 0 chr10 23217558 23217628 -117099137 - MIR SINE MIR -141 121 52 1037 152 0 12 chr10 23217737 23217902 -117098863 + FRAM SINE Alu 4 166 0 393 286 76 12 chr10 23218003 23218174 -117098591 + MIR SINE MIR 80 261 -1 2859 102 7 5 chr10 23218561 23218974 -117097791 + L1PA13 LINE L1 5750 6163 0 1209 189 99 0 chr10 23219815 23220048 -117096717 + AluJb SINE Alu 49 304 -8 2195 118 0 16 chr10 23220050 23220365 -117096400 + AluSx SINE Alu 1 310 -2 315 113 0 0 chr10 23221925 23221978 -117094787 + (T)n Simple_repeat Simple_repeat 1 53 0 2152 102 0 0 chr10 23223509 23223783 -117092982 - AluSx SINE Alu -18 294 21 1595 134 5 0 chr10 23224460 23224683 -117092082 + AluSx SINE Alu 1 224 -88 884 141 0 0 chr10 23224683 23224804 -117091961 + AluSp SINE Alu 132 252 -61 438 98 16 0 chr10 23225497 23225558 -117091207 - Alu SINE Alu -248 63 2 413 230 105 63 chr10 23225876 23226067 -117090698 + MER34 LTR ERV1 344 542 0 1038 172 10 5 chr10 23226189 23226381 -117090384 + AluJo SINE Alu 120 312 0 364 289 39 0 chr10 23226404 23226508 -117090257 + MIR SINE MIR 90 197 -65 1424 115 91 12 chr10 23226928 23227181 -117089584 + MER34C LTR ERV1 5 277 -308 1006 214 106 106 chr10 23227245 23227802 -117088963 - LTR1B LTR ERV1 -237 589 33 1671 151 45 10 chr10 23227875 23228167 -117088598 + MER34C LTR ERV1 252 553 -32 228 200 0 0 chr10 23228167 23228202 -117088563 + MER34C LTR ERV1 1 35 -550 * 553 191 182 83 chr10 23228171 23228437 -117088328 + MER39 LTR ERV1 5 487 -220 873 101 7 36 chr10 23228440 23228579 -117088186 - AluSg/x SINE Alu -8 304 170 258 269 68 19 chr10 23229063 23229222 -117087543 - MIR SINE MIR 0 262 95 561 177 11 33 chr10 23229228 23229409 -117087356 + CT-rich Low_complexity Low_complexity 2 178 0 23 0 0 0 chr10 23229742 23229765 -117087000 + AT_rich Low_complexity Low_complexity 1 23 0 791 175 0 7 chr10 23230121 23230258 -117086507 + AluJo SINE Alu 1 136 -176 1917 118 4 15 chr10 23230258 23230530 -117086235 + AluSx SINE Alu 23 291 -21 2309 103 0 0 chr10 23230550 23230860 -117085905 + AluY SINE Alu 1 310 -1 180 277 31 31 chr10 23230953 23231018 -117085747 - MIR3 SINE MIR -31 177 113 1021 231 58 0 chr10 23231293 23231570 -117085195 - MER5C DNA MER1_type -2 322 30 270 308 56 0 chr10 23232129 23232236 -117084529 + MIR SINE MIR 89 201 -61 494 339 41 14 chr10 23232385 23232603 -117084162 + MLT1K LTR MaLR 23 246 -342 1726 151 3 56 chr10 23233095 23233244 -117083521 + AluJb SINE Alu 1 127 -185 2181 127 3 0 chr10 23233244 23233543 -117083222 + AluSq SINE Alu 1 300 -13 1726 151 3 56 chr10 23233543 23233698 -117083067 + AluJb SINE Alu 127 289 -23 2307 103 3 3 chr10 23233990 23234292 -117082473 + AluSq SINE Alu 1 302 -11 427 168 58 152 chr10 23234314 23234505 -117082260 - L1MC5 LINE L1 -60 7901 7729 2208 99 14 0 chr10 23234506 23234824 -117081941 - AluSp SINE Alu 0 324 3 1677 199 3 3 chr10 23234824 23235126 -117081639 - AluJo SINE Alu -10 302 1 32 0 0 0 chr10 23235132 23235164 -117081601 + AT_rich Low_complexity Low_complexity 1 32 0 2414 69 0 0 chr10 23235164 23235453 -117081312 - AluY SINE Alu -22 289 1 2165 114 0 0 chr10 23235464 23235753 -117081012 - AluSq SINE Alu -24 289 1 1065 244 31 39 chr10 23235769 23236183 -117080582 - L1MC5 LINE L1 -240 7721 7311 293 287 69 0 chr10 23237455 23237556 -117079209 + L2 LINE L2 3149 3256 -16 921 206 57 0 chr10 23237853 23238047 -117078718 - MLT1D LTR MaLR 0 505 301 1906 162 3 3 chr10 23238116 23238419 -117078346 + AluSp SINE Alu 1 303 -10 1707 162 19 26 chr10 23238455 23238764 -117078001 + AluJo SINE Alu 1 307 -5 497 273 37 51 chr10 23238841 23239057 -117077708 + MLT1J LTR MaLR 64 276 -235 1144 120 0 0 chr10 23239206 23239387 -117077378 - AluJo/FRAM SINE Alu 0 314 134 2231 116 3 0 chr10 23239387 23239690 -117077075 - AluSq SINE Alu -9 304 1 2069 140 59 6 chr10 23239733 23240089 -117076676 + THE1C LTR MaLR 1 375 0 2023 149 3 0 chr10 23240236 23240532 -117076233 - AluSx SINE Alu -15 297 1 1904 163 0 3 chr10 23240911 23241238 -117075527 + AluSx SINE Alu 1 326 0 338 271 98 0 chr10 23241709 23241831 -117074934 - L2 LINE L2 -1 3271 3138 1399 186 23 107 chr10 23241873 23242266 -117074499 - MLT1A1 LTR MaLR -5 360 1 573 208 21 21 chr10 23242341 23242485 -117074280 - LTR33 LTR ERVL -4 517 374 1714 183 0 25 chr10 23242638 23242955 -117073810 - AluJo SINE Alu -2 310 2 485 296 55 40 chr10 23243071 23243280 -117073485 + MLT1J LTR MaLR 8 184 -262 1660 184 25 3 chr10 23243280 23243562 -117073203 - AluJo SINE Alu -24 288 1 485 296 55 40 chr10 23243562 23243663 -117073102 + MLT1J LTR MaLR 184 282 -164 273 146 49 61 chr10 23243687 23243769 -117072996 + MLT1J1 LTR MaLR 366 446 0 346 211 0 14 chr10 23243885 23243956 -117072809 - AluSg/x SINE Alu -74 226 157 298 274 83 12 chr10 23243999 23244083 -117072682 - AluJo SINE Alu -131 171 82 1134 157 22 63 chr10 23244085 23244308 -117072457 - AluJo SINE Alu -98 214 1 2267 117 0 0 chr10 23244481 23244788 -117071977 - AluSg SINE Alu -3 307 1 2298 92 0 7 chr10 23245021 23245324 -117071441 - AluSp SINE Alu -12 301 1 2053 129 3 19 chr10 23245467 23245776 -117070989 + AluSx SINE Alu 2 305 -7 2609 68 3 0 chr10 23245817 23246126 -117070639 - AluSp SINE Alu -3 310 1 1855 118 53 0 chr10 23246362 23246625 -117070140 - AluSq SINE Alu -14 299 23 2434 72 0 16 chr10 23246815 23247121 -117069644 - AluSp SINE Alu -12 301 1 1423 210 64 62 chr10 23247580 23247905 -117068860 + MER39 LTR ERV1 1 324 -383 2480 81 0 0 chr10 23247905 23248202 -117068563 + AluSg SINE Alu 1 297 -13 1423 210 64 62 chr10 23248202 23248370 -117068395 + MER39 LTR ERV1 324 706 -1 1701 151 8 11 chr10 23248442 23248707 -117068058 - AluSx SINE Alu -17 295 32 853 153 15 0 chr10 23248764 23248895 -117067870 + FLAM_C SINE Alu 1 133 0 26 0 0 27 chr10 23248922 23248946 -117067819 + AT_rich Low_complexity Low_complexity 1 25 -11 2268 103 10 0 chr10 23248946 23249238 -117067527 + AluSx SINE Alu 1 295 -17 26 0 0 27 chr10 23249238 23249250 -117067515 + AT_rich Low_complexity Low_complexity 25 36 0 2824 135 21 9 chr10 23249707 23249810 -117066955 + MER39 LTR ERV1 3 103 -604 3142 191 43 16 chr10 23249810 23250416 -117066349 - LTR26E LTR ERV1 0 622 1 2824 135 21 9 chr10 23250416 23250749 -117066016 + MER39 LTR ERV1 103 444 -263 1345 132 5 9 chr10 23250750 23250962 -117065803 + MER4B LTR ERV1 2 212 -398 2192 119 0 7 chr10 23250990 23251285 -117065480 + AluSx SINE Alu 1 293 -19 1337 216 65 89 chr10 23251285 23251812 -117064953 + LTR9 LTR ERV1 84 597 -15 1915 142 3 7 chr10 23253049 23253351 -117063414 + AluJb SINE Alu 1 301 -11 574 296 33 25 chr10 23253943 23254183 -117062582 - MIR SINE MIR -20 242 1 1099 126 23 11 chr10 23254208 23254382 -117062383 + AluSg/x SINE Alu 118 293 -17 2175 109 3 0 chr10 23254394 23254708 -117062057 + AluSg SINE Alu 1 310 0 820 156 54 0 chr10 23254720 23254887 -117061878 - L1MA8 LINE L1 -12 6279 6104 1047 97 6 68 chr10 23254895 23255071 -117061694 + FAM SINE Alu 1 48 -1 300 68 23 0 chr10 23255076 23255131 -117061634 - L1MA8 LINE L1 -189 6102 6044 329 248 201 7 chr10 23255153 23255302 -117061463 - MER104 DNA Tc2 -1 179 2 1573 188 0 20 chr10 23256090 23256393 -117060372 - AluJo SINE Alu -15 297 1 1903 102 8 4 chr10 23256528 23256784 -117059981 - AluSc SINE Alu -12 297 41 399 133 2 0 chr10 23256784 23256855 -117059910 - AluJo/FLAM SINE Alu -169 133 71 418 342 4 21 chr10 23256952 23257189 -117059576 + L2 LINE L2 2048 2280 -1034 189 333 9 9 chr10 23257455 23257560 -117059205 + L2 LINE L2 2737 2841 -473 2287 117 3 0 chr10 23257629 23257961 -117058804 - AluSx SINE Alu 0 312 1 698 186 0 23 chr10 23258408 23258537 -117058228 - FLAM_A SINE Alu -7 126 1 1490 172 35 21 chr10 23258654 23258939 -117057826 + AluJo SINE Alu 1 289 -23 26 0 0 0 chr10 23258952 23258978 -117057787 + AT_rich Low_complexity Low_complexity 1 26 0 261 149 21 0 chr10 23258978 23259025 -117057740 - MLT1B LTR MaLR -342 48 1 2006 146 0 0 chr10 23259108 23259434 -117057331 - AluSx SINE Alu 0 328 3 637 224 81 6 chr10 23260023 23260197 -117056568 + MIR SINE MIR 3 189 -73 2071 123 12 110 chr10 23260229 23260385 -117056380 + MLT1B LTR MaLR 1 171 -219 2152 119 10 10 chr10 23260385 23260697 -117056068 + AluSx SINE Alu 1 312 0 2071 123 12 110 chr10 23260697 23260969 -117055796 + MLT1B LTR MaLR 171 387 -3 4525 75 17 11 chr10 23261024 23262045 -117054720 - MER11A LTR ERVK 0 1266 1 2210 125 0 0 chr10 23262136 23262431 -117054334 - AluSg SINE Alu -15 295 1 24 32 0 0 chr10 23263630 23263661 -117053104 + AT_rich Low_complexity Low_complexity 1 31 0 2016 137 3 10 chr10 23263869 23264168 -117052597 - AluSx SINE Alu -15 297 1 2084 155 64 50 chr10 23264375 23264719 -117052046 + MSTB LTR MaLR 1 354 -72 2065 125 7 3 chr10 23264719 23265022 -117051743 + AluSx SINE Alu 1 304 -8 2084 155 64 50 chr10 23265022 23265097 -117051668 + MSTB LTR MaLR 354 426 0 549 280 88 53 chr10 23265131 23265575 -117051190 + MLT1J1 LTR MaLR 3 437 -9 1016 180 0 116 chr10 23265958 23266191 -117050574 + AluJo SINE Alu 1 206 -106 270 0 0 0 chr10 23266369 23266399 -117050366 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 2093 118 0 4 chr10 23266399 23266679 -117050086 - AluSx SINE Alu -33 279 1 22 41 0 55 chr10 23266828 23266849 -117049916 + AT_rich Low_complexity Low_complexity 1 22 -47 1938 88 0 8 chr10 23266849 23267098 -117049667 - AluSg SINE Alu -26 284 38 22 41 0 55 chr10 23267098 23267115 -117049650 + AT_rich Low_complexity Low_complexity 22 38 -31 949 173 0 24 chr10 23267115 23267283 -117049482 - FAM SINE Alu -11 164 1 22 41 0 55 chr10 23267283 23267316 -117049449 + AT_rich Low_complexity Low_complexity 38 69 0 2424 80 0 0 chr10 23267553 23267864 -117048901 - AluSx SINE Alu -1 311 1 1320 164 66 4 chr10 23268233 23268477 -117048288 + AluJb SINE Alu 1 259 -53 209 33 33 0 chr10 23268503 23268533 -117048232 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1721 157 31 3 chr10 23269291 23269584 -117047181 + AluJo SINE Alu 1 301 -11 2064 112 3 0 chr10 23269586 23269881 -117046884 + AluY SINE Alu 1 296 -15 1889 166 0 0 chr10 23269906 23270208 -117046557 + AluJo SINE Alu 1 302 -10 319 92 0 31 chr10 23270302 23270369 -117046396 - MER39 LTR ERV1 -55 648 487 207 0 0 0 chr10 23270369 23270392 -117046373 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 690 121 0 0 chr10 23270394 23270493 -117046272 - AluY SINE Alu -30 281 183 1342 149 9 9 chr10 23270641 23270863 -117045902 - AluSc SINE Alu -86 223 2 312 143 0 0 chr10 23270865 23270914 -117045851 - MER39 LTR ERV1 -104 603 555 999 146 0 11 chr10 23270915 23271093 -117045672 + AluSg/x SINE Alu 135 310 0 881 291 83 32 chr10 23271093 23271467 -117045298 - MER34 LTR ERV1 -149 393 1 1767 155 7 7 chr10 23271476 23271779 -117044986 - AluJb SINE Alu -9 303 1 28 48 0 0 chr10 23272480 23272522 -117044243 + AT_rich Low_complexity Low_complexity 1 42 0 238 288 0 0 chr10 23272895 23272954 -117043811 - MIR SINE MIR -130 132 74 693 79 30 0 chr10 23273240 23273341 -117043424 - AluSp/q SINE Alu -5 308 205 236 95 0 0 chr10 23273341 23273383 -117043382 + Alu SINE Alu 259 300 0 533 286 40 107 chr10 23273417 23273550 -117043215 - MIR SINE MIR -18 244 104 1371 158 150 4 chr10 23273550 23273797 -117042968 + AluJo SINE Alu 1 283 -19 1035 103 0 27 chr10 23273797 23273982 -117042783 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 533 286 40 107 chr10 23273982 23274099 -117042666 - MIR SINE MIR -156 106 10 773 167 8 8 chr10 23274329 23274461 -117042304 - FLAM_C SINE Alu -1 132 1 32 67 0 0 chr10 23274591 23274651 -117042114 + AT_rich Low_complexity Low_complexity 1 60 0 2056 99 38 0 chr10 23275308 23275600 -117041165 - AluSx SINE Alu -9 303 1 359 176 49 92 chr10 23275885 23275915 -117040850 + L1ME4a LINE L1 5948 5978 -143 1709 167 21 0 chr10 23275915 23276203 -117040562 + AluJo SINE Alu 1 294 -18 359 176 49 92 chr10 23276203 23276314 -117040451 + L1ME4a LINE L1 5978 6083 -38 4751 144 66 4 chr10 23277177 23277955 -117038810 - LTR1B LTR ERV1 0 826 1 647 186 100 26 chr10 23278040 23278239 -117038526 - MLT1G1 LTR MaLR 0 595 325 264 111 0 0 chr10 23278249 23278294 -117038471 + (A)n Simple_repeat Simple_repeat 1 45 0 2276 80 7 0 chr10 23278435 23278734 -117038031 - AluSq SINE Alu -12 301 1 1331 129 36 13 chr10 23278945 23279169 -117037596 + LTR39 LTR ERV1 1 229 -554 2037 123 3 0 chr10 23279169 23279471 -117037294 - AluSx SINE Alu -9 303 1 969 201 63 0 chr10 23279471 23279645 -117037120 + LTR39 LTR ERV1 599 783 0 2177 103 0 7 chr10 23279903 23280213 -117036552 + AluSq SINE Alu 1 308 -5 1989 139 0 3 chr10 23280282 23280583 -117036182 + AluSq SINE Alu 1 300 -13 32 26 0 0 chr10 23280598 23280637 -117036128 + AT_rich Low_complexity Low_complexity 1 39 0 2186 100 0 0 chr10 23282122 23282422 -117034343 + AluSc SINE Alu 1 300 -9 431 178 0 0 chr10 23282643 23282716 -117034049 - MLT1A1 LTR MaLR 0 365 293 2169 103 7 3 chr10 23282733 23283043 -117033722 - AluSx SINE Alu -1 311 1 1431 202 17 10 chr10 23283049 23283341 -117033424 - AluJb SINE Alu -18 294 1 1488 215 6 3 chr10 23283344 23283655 -117033110 - AluJo SINE Alu 0 312 1 1993 140 0 29 chr10 23283655 23283969 -117032796 - MLT1A1 LTR MaLR -60 305 1 982 156 0 23 chr10 23284040 23284213 -117032552 + FRAM SINE Alu 1 168 -8 987 242 139 26 chr10 23284259 23284647 -117032118 - LTR16A LTR ERVL 0 450 19 248 303 90 41 chr10 23285121 23285243 -117031522 + L2 LINE L2 3133 3260 -12 1777 137 113 18 chr10 23285246 23285582 -117031183 + LTR29 LTR ERV1 1 303 -319 1629 246 43 66 chr10 23285582 23286207 -117030558 - LTR9 LTR ERV1 0 612 2 1777 137 113 18 chr10 23286207 23286409 -117030356 + LTR29 LTR ERV1 303 622 0 3766 134 8 31 chr10 23286519 23286835 -117029930 - MER4D LTR ERV1 -9 894 572 2024 87 50 4 chr10 23286835 23287112 -117029653 + AluSg SINE Alu 1 290 -20 3766 134 8 31 chr10 23287112 23287393 -117029372 - MER4D LTR ERV1 -331 572 309 2048 141 3 0 chr10 23287393 23287705 -117029060 + AluSq SINE Alu 1 313 0 3766 134 8 31 chr10 23287705 23287723 -117029042 - MER4D LTR ERV1 -594 309 292 507 265 123 12 chr10 23287730 23287892 -117028873 + LTR1 LTR ERV1 38 217 -568 606 189 32 41 chr10 23287950 23288133 -117028632 + LTR1B LTR ERV1 343 493 -333 285 213 27 153 chr10 23288142 23288292 -117028473 + LTR28 LTR ERV1 848 978 -42 2032 128 10 10 chr10 23288341 23288653 -117028112 - MER4D LTR ERV1 -560 312 1 1419 115 91 12 chr10 23289233 23289486 -117027279 + MER34C LTR ERV1 5 277 -308 1044 212 106 106 chr10 23289550 23290107 -117026658 - LTR1B LTR ERV1 -237 589 33 1659 151 45 10 chr10 23290180 23290472 -117026293 + MER34C LTR ERV1 252 553 -32 227 200 0 0 chr10 23290472 23290507 -117026258 + MER34C LTR ERV1 1 35 -550 * 649 181 181 83 chr10 23290476 23290744 -117026021 + MER39 LTR ERV1 5 489 -218 2240 95 13 0 chr10 23290745 23291049 -117025716 - AluSx SINE Alu -4 308 1 1178 164 9 43 chr10 23291062 23291294 -117025471 + MER87 LTR ERV1 1 224 -317 1710 188 39 36 chr10 23291449 23291492 -117025273 + MER87 LTR ERV1 180 221 -320 1881 128 3 7 chr10 23291492 23291790 -117024975 + AluSp SINE Alu 1 297 -16 1710 188 39 36 chr10 23291790 23291964 -117024801 + MER87 LTR ERV1 221 401 -140 2031 128 3 0 chr10 23291964 23292261 -117024504 - AluSx SINE Alu -14 298 1 1710 188 39 36 chr10 23292261 23292403 -117024362 + MER87 LTR ERV1 401 541 0 3771 169 49 25 chr10 23292419 23293166 -117023599 - LTR1B LTR ERV1 0 785 1 879 151 32 91 chr10 23293166 23293207 -117023558 + MER39 LTR ERV1 502 544 -163 1177 150 6 0 chr10 23293207 23293380 -117023385 + FAM SINE Alu 1 174 -1 879 151 32 91 chr10 23293380 23293448 -117023317 + MER39 LTR ERV1 544 614 -93 1753 118 89 4 chr10 23293448 23293719 -117023046 + AluSq SINE Alu 1 294 -19 879 151 32 91 chr10 23293719 23293827 -117022938 + MER39 LTR ERV1 614 707 0 2071 160 18 18 chr10 23293876 23294109 -117022656 - MER1B DNA MER1_type -2373 339 104 2100 122 34 71 chr10 23294109 23294487 -117022278 - THE1B LTR MaLR 0 364 1 2071 160 18 18 chr10 23294487 23294590 -117022175 - MER1B DNA MER1_type -2607 105 3 1994 138 0 19 chr10 23295157 23295475 -117021290 + AluSx SINE Alu 1 312 0 446 214 79 43 chr10 23295712 23295852 -117020913 - L1ME LINE L1 -616 5505 5361 914 142 25 19 chr10 23296296 23296458 -117020307 - Tigger7 DNA MER2_type 0 2487 2325 1801 95 3 79 chr10 23296476 23296781 -117019984 + AluSx SINE Alu 11 292 -20 3312 21 0 18 chr10 23296881 23297265 -117019500 + SVA Other Other 1010 1386 0 509 212 93 8 chr10 23297459 23297577 -117019188 - FLAM_C SINE Alu -1 132 5 1480 150 43 8 chr10 23297585 23297911 -117018854 - AluJb SINE Alu 0 355 21 4359 103 36 6 chr10 23297934 23298572 -117018193 - MER4D LTR ERV1 -246 657 1 951 114 29 7 chr10 23298578 23298718 -117018047 - MER39 LTR ERV1 -269 438 296 863 250 22 14 chr10 23299151 23299385 -117017380 + LTR48 LTR ERV1 11 214 -430 919 121 0 7 chr10 23299409 23299550 -117017215 + FLAM_C SINE Alu 1 140 -3 1894 175 145 30 chr10 23299552 23300056 -117016709 + LTR48 LTR ERV1 226 787 0 2034 119 3 7 chr10 23300373 23300683 -117016082 + AluSx SINE Alu 1 309 -3 430 198 121 36 chr10 23300688 23300804 -117015961 + MIR SINE MIR 30 154 -62 1806 136 0 29 chr10 23301836 23302145 -117014620 + AluJo SINE Alu 1 300 -12 2890 149 14 93 chr10 23302167 23302792 -117013973 - MER6A DNA MER2_type -260 605 33 2001 127 0 7 chr10 23302792 23303092 -117013673 + AluSq SINE Alu 1 298 -15 2890 149 14 93 chr10 23303092 23303122 -117013643 - MER6A DNA MER2_type -832 33 2 1727 162 7 3 chr10 23303544 23303847 -117012918 - AluJo SINE Alu -8 304 1 1476 154 4 4 chr10 23304082 23304322 -117012443 + AluJo SINE Alu 40 279 -33 333 0 0 0 chr10 23304323 23304360 -117012405 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 550 275 82 0 chr10 23304387 23304558 -117012207 + MIR SINE MIR 12 196 -66 1163 137 75 156 chr10 23304858 23305165 -117011600 - AluJo SINE Alu -18 284 3 1711 119 56 0 chr10 23305176 23305481 -117011284 - AluSx SINE Alu 0 321 2 414 257 166 50 chr10 23305627 23305850 -117010915 - L1MC5 LINE L1 -184 7777 7523 2104 121 0 6 chr10 23305850 23306163 -117010602 - AluSq SINE Alu -2 311 1 414 257 166 50 chr10 23306163 23306180 -117010585 - L1MC5 LINE L1 -438 7523 7509 409 186 153 0 chr10 23306198 23306322 -117010443 + L1ME4a LINE L1 5979 6121 0 1713 167 6 16 chr10 23306339 23306650 -117010115 + AluJb SINE Alu 5 312 0 796 204 0 0 chr10 23306675 23306807 -117009958 + FLAM_A SINE Alu 1 132 -1 2184 99 7 0 chr10 23306942 23307244 -117009521 - AluSq SINE Alu -7 306 3 192 274 0 0 chr10 23307379 23307430 -117009335 + L2 LINE L2 3263 3313 0 494 239 78 14 chr10 23307719 23307747 -117009018 - MER5A DNA MER1_type 0 189 164 1657 162 3 31 chr10 23307747 23308068 -117008697 - AluJo SINE Alu 0 312 1 494 239 78 14 chr10 23308068 23308181 -117008584 - MER5A DNA MER1_type -25 164 39 805 174 8 0 chr10 23308210 23308342 -117008423 + AluJo SINE Alu 2 134 -178 1526 176 28 3 chr10 23308350 23308466 -117008299 + AluJb SINE Alu 1 113 -199 200 86 29 0 chr10 23308466 23308501 -117008264 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 1526 176 28 3 chr10 23308501 23308668 -117008097 + AluJb SINE Alu 113 291 -21 330 277 7 123 chr10 23308669 23308824 -117007941 - MER5B DNA MER1_type -30 148 12 1718 75 13 0 chr10 23308831 23309057 -117007708 - L1PA10 LINE L1 -1 6167 5939 302 231 213 9 chr10 23309143 23309251 -117007514 - L1ME4a LINE L1 -1 6120 5991 1713 169 7 10 chr10 23309274 23309569 -117007196 + AluJo SINE Alu 6 299 -13 1641 180 0 27 chr10 23309569 23309708 -117007057 + AluSx SINE Alu 2 143 -169 2091 110 3 0 chr10 23309708 23310000 -117006765 + AluSp SINE Alu 1 293 -20 1641 180 0 27 chr10 23310000 23310154 -117006611 + AluSx SINE Alu 143 287 -25 23 78 0 0 chr10 23310156 23310207 -117006558 + AT_rich Low_complexity Low_complexity 1 51 0 809 140 0 0 chr10 23310250 23310364 -117006401 + FLAM_C SINE Alu 11 124 -19 2591 146 21 5 chr10 23310388 23310807 -117005958 + MSTA LTR MaLR 3 428 0 1167 181 0 0 chr10 23311817 23312016 -117004749 + AluJb SINE Alu 86 284 -28 2005 118 0 7 chr10 23312034 23312366 -117004399 - AluSx SINE Alu 0 330 1 294 259 62 0 chr10 23312510 23312591 -117004174 - L2 LINE L2 -1 3312 3227 550 280 50 61 chr10 23312619 23312752 -117004013 + Charlie8 DNA MER1_type 1 131 -210 2168 97 3 0 chr10 23312752 23313051 -117003714 + AluSg SINE Alu 2 301 -9 550 280 50 61 chr10 23313051 23313178 -117003587 + Charlie8 DNA MER1_type 131 258 -83 182 306 199 88 chr10 23313414 23313630 -117003135 - MIR SINE MIR 0 262 23 183 156 0 0 chr10 23314377 23314409 -117002356 + (TA)n Simple_repeat Simple_repeat 2 33 0 210 222 0 22 chr10 23314519 23314564 -117002201 + MIR SINE MIR 97 140 -68 1963 164 0 0 chr10 23314574 23314886 -117001879 + AluJb SINE Alu 1 312 0 2080 105 7 3 chr10 23314886 23315191 -117001574 + AluSc SINE Alu 1 306 -3 480 315 63 57 chr10 23315488 23315934 -117000831 + L1MEd LINE L1 323 774 -5345 2310 81 3 0 chr10 23315934 23316232 -117000533 + AluSp SINE Alu 2 300 -13 480 315 63 57 chr10 23316232 23316344 -117000421 + L1MEd LINE L1 774 884 -5235 537 260 55 0 chr10 23316369 23316496 -117000269 - L2 LINE L2 -19 3294 3161 24 67 0 0 chr10 23316589 23316634 -117000131 + AT_rich Low_complexity Low_complexity 1 45 0 2045 104 3 10 chr10 23317076 23317374 -116999391 - AluSc SINE Alu -13 296 1 2027 110 0 26 chr10 23317374 23317682 -116999083 - AluSx SINE Alu -12 300 1 852 79 0 9 chr10 23317682 23317796 -116998969 - MER41B LTR ERV1 -477 158 46 2045 104 3 10 chr10 23318579 23318877 -116997888 - AluSc SINE Alu -13 296 1 2027 110 0 26 chr10 23318877 23319185 -116997580 - AluSx SINE Alu -12 300 1 852 79 0 9 chr10 23319185 23319299 -116997466 - MER41A LTR ERV1 -396 158 46 2056 121 0 0 chr10 23319546 23319853 -116996912 + AluSx SINE Alu 1 307 -5 2048 106 0 39 chr10 23320450 23320761 -116996004 - AluSg1 SINE Alu -8 301 3 22 0 0 0 chr10 23320767 23320789 -116995976 + AT_rich Low_complexity Low_complexity 1 22 0 280 260 125 0 chr10 23320822 23320918 -116995847 - L2 LINE L2 0 3313 3206 22 0 0 0 chr10 23321309 23321331 -116995434 + AT_rich Low_complexity Low_complexity 1 22 0 1695 160 11 3 chr10 23321364 23321651 -116995114 + AluSx SINE Alu 1 289 -23 1834 154 7 0 chr10 23322887 23323180 -116993585 - AluJb SINE Alu -17 295 1 1519 197 20 0 chr10 23323843 23324148 -116992617 - AluJo SINE Alu -1 311 1 316 218 23 11 chr10 23324216 23324303 -116992462 - LTR33 LTR ERVL -3 518 431 1852 177 2 104 chr10 23324303 23324594 -116992171 - MLT1B LTR MaLR 0 390 156 981 193 0 0 chr10 23324594 23324755 -116992010 - FRAM SINE Alu -5 161 1 1852 177 2 104 chr10 23324755 23324897 -116991868 - MLT1B LTR MaLR -234 156 1 1987 125 7 0 chr10 23324897 23325200 -116991565 + AluSx SINE Alu 1 305 -7 371 295 9 0 chr10 23325201 23325306 -116991459 - LTR33 LTR ERVL -85 436 331 601 172 52 0 chr10 23325328 23325444 -116991321 + FRAM SINE Alu 55 176 0 1988 107 41 0 chr10 23325447 23325738 -116991027 + AluSg SINE Alu 1 303 -7 2179 122 3 0 chr10 23326569 23326880 -116989885 + AluSx SINE Alu 1 312 0 2206 77 0 3 chr10 23326992 23327277 -116989488 + AluSc SINE Alu 10 293 -16 826 153 0 8 chr10 23327465 23327596 -116989169 + FLAM_C SINE Alu 1 130 -3 2206 81 0 3 chr10 23327661 23327958 -116988807 - AluY SINE Alu -10 301 6 282 29 0 0 chr10 23327974 23328009 -116988756 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2213 71 0 4 chr10 23328012 23328293 -116988472 - AluSq SINE Alu -33 280 1 1978 129 0 3 chr10 23328303 23328624 -116988141 - AluSx SINE Alu 0 320 1 274 197 0 0 chr10 23328961 23329022 -116987743 + L1MB4 LINE L1 6120 6180 0 2289 93 0 0 chr10 23329383 23329694 -116987071 + AluY SINE Alu 1 311 0 2336 90 0 0 chr10 23329712 23330011 -116986754 + AluSg SINE Alu 1 299 -11 1816 147 3 17 chr10 23330015 23330314 -116986451 + AluSx SINE Alu 1 295 -17 372 333 38 0 chr10 23330383 23330515 -116986250 - L2 LINE L2 -2 3270 3134 2172 84 0 23 chr10 23330659 23330968 -116985797 - AluSc SINE Alu -7 302 1 1980 136 0 16 chr10 23331527 23331836 -116984929 + AluSx SINE Alu 1 304 -8 995 158 0 0 chr10 23332049 23332214 -116984551 + AluSg/x SINE Alu 137 301 -11 225 167 0 0 chr10 23332423 23332459 -116984306 + AluSx SINE Alu 1 36 -266 1921 106 0 64 chr10 23332459 23332770 -116983995 + AluSg SINE Alu 8 298 -12 1000 113 0 108 chr10 23332789 23332974 -116983791 + AluJb SINE Alu 136 300 -12 249 291 64 55 chr10 23332981 23333091 -116983674 + L1MC4a LINE L1 5541 5651 -511 403 249 28 68 chr10 23333135 23333312 -116983453 + L1MC4a LINE L1 5764 5933 -1875 2024 125 0 0 chr10 23333408 23333704 -116983061 + AluSx SINE Alu 12 307 -5 650 240 0 0 chr10 23333843 23333972 -116982793 + FLAM_A SINE Alu 1 129 -4 1543 97 0 0 chr10 23334009 23334216 -116982549 + AluSc SINE Alu 82 288 -21 2366 64 0 0 chr10 23334236 23334534 -116982231 + AluY SINE Alu 1 298 -13 593 146 0 0 chr10 23334579 23334668 -116982097 - AluSg/x SINE Alu -21 289 201 1629 186 3 7 chr10 23335278 23335573 -116981192 + AluJo SINE Alu 1 294 -18 1913 142 0 26 chr10 23335943 23336253 -116980512 + AluSx SINE Alu 1 302 -10 1600 115 0 0 chr10 23336379 23336605 -116980160 - AluSg/x SINE Alu -4 305 80 1824 126 19 0 chr10 23336700 23336969 -116979796 + AluSx SINE Alu 23 296 -16 2285 164 28 39 chr10 23337218 23337611 -116979154 + MSTA LTR MaLR 1 390 -38 1986 120 27 0 chr10 23337611 23337910 -116978855 - AluSx SINE Alu -4 308 2 2285 164 28 39 chr10 23337910 23337949 -116978816 + MSTA LTR MaLR 390 428 0 1867 128 12 40 chr10 23338141 23338462 -116978303 - AluSx SINE Alu 0 312 1 180 111 0 0 chr10 23338471 23338498 -116978267 + (TA)n Simple_repeat Simple_repeat 1 27 0 1814 136 10 10 chr10 23338498 23338783 -116977982 - AluSx SINE Alu -24 288 1 2077 132 0 3 chr10 23338795 23339106 -116977659 - AluSg SINE Alu 0 310 1 1797 169 0 0 chr10 23339171 23339472 -116977293 - AluJb SINE Alu -11 301 1 4963 160 34 21 chr10 23339472 23340143 -116976622 + Charlie1 DNA MER1_type 1780 2469 -292 2421 77 3 0 chr10 23340143 23340454 -116976311 - AluSp SINE Alu -1 312 1 4963 160 34 21 chr10 23340454 23340751 -116976014 + Charlie1 DNA MER1_type 2469 2761 0 2241 94 3 0 chr10 23341421 23341719 -116975046 + AluSg SINE Alu 1 299 -11 850 159 0 0 chr10 23341879 23342011 -116974754 + FLAM_C SINE Alu 1 132 -1 30 0 0 0 chr10 23342159 23342189 -116974576 + AT_rich Low_complexity Low_complexity 1 30 0 1180 111 28 0 chr10 23342225 23342405 -116974360 - AluSx SINE Alu -1 309 125 847 123 46 0 chr10 23342508 23342638 -116974127 - AluSx SINE Alu -177 136 1 596 203 36 7 chr10 23342647 23342785 -116973980 - MLT1J2 LTR MaLR -308 142 1 2001 95 0 0 chr10 23342821 23343085 -116973680 + AluSx SINE Alu 1 264 -48 399 322 21 73 chr10 23343107 23343340 -116973425 - L2 LINE L2 -432 2882 2662 742 167 7 43 chr10 23343340 23343478 -116973287 + FLAM_C SINE Alu 1 133 0 2215 96 0 0 chr10 23343553 23343846 -116972919 - AluSg SINE Alu -17 293 1 187 340 124 10 chr10 23343864 23344058 -116972707 - L2 LINE L2 -952 2362 2147 447 283 9 0 chr10 23344133 23344239 -116972526 + MER63A DNA MER1_type 104 210 0 2223 63 7 10 chr10 23344298 23344598 -116972167 + AluY SINE Alu 6 304 -7 1190 108 0 0 chr10 23344598 23344764 -116972001 + AluSg/x SINE Alu 134 299 -13 248 352 11 80 chr10 23344846 23344908 -116971857 - L2 LINE L2 -1357 1957 1892 1618 144 10 40 chr10 23344908 23345206 -116971559 - AluJb SINE Alu -14 298 10 248 352 11 80 chr10 23345206 23345319 -116971446 - L2 LINE L2 -1422 1892 1794 382 169 56 0 chr10 23345319 23345408 -116971357 + AluJ/FLAM SINE Alu 2 95 -207 23 33 0 0 chr10 23345531 23345561 -116971204 + AT_rich Low_complexity Low_complexity 1 30 0 961 169 0 6 chr10 23345596 23345762 -116971003 + AluSg/x SINE Alu 124 288 -22 324 227 0 0 chr10 23345763 23345829 -116970936 + U3 snRNA snRNA 1 66 -151 846 154 0 0 chr10 23345897 23346020 -116970745 - FLAM_A SINE Alu -10 123 1 1515 155 15 8 chr10 23346161 23346426 -116970339 + AluJb SINE Alu 38 304 -8 518 322 109 22 chr10 23346454 23346721 -116970044 + L2 LINE L2 3016 3305 -8 2090 123 7 0 chr10 23346735 23347044 -116969721 + AluSx SINE Alu 1 311 -1 2060 101 31 0 chr10 23347168 23347456 -116969309 - AluSq SINE Alu -15 298 2 1741 119 20 0 chr10 23347505 23347757 -116969008 - AluSx SINE Alu -55 257 1 986 207 267 26 chr10 23347797 23348213 -116968552 - MLT1H LTR MaLR -9 540 25 1305 219 9 88 chr10 23348329 23348657 -116968108 + AluJo SINE Alu 1 302 0 1435 148 3 77 chr10 23349252 23349563 -116967202 - AluJb SINE Alu -14 298 11 23 0 0 0 chr10 23349990 23350013 -116966752 + AT_rich Low_complexity Low_complexity 1 23 0 838 163 0 14 chr10 23350076 23350217 -116966548 - FRAM SINE Alu -18 158 20 21 0 0 0 chr10 23351227 23351248 -116965517 + AT_rich Low_complexity Low_complexity 1 21 0 2181 101 0 7 chr10 23352062 23352360 -116964405 + AluSg SINE Alu 1 296 -14 22 35 0 0 chr10 23353106 23353135 -116963630 + AT_rich Low_complexity Low_complexity 1 29 0 2061 110 7 13 chr10 23353825 23354135 -116962630 + AluSg SINE Alu 1 308 -2 301 241 0 25 chr10 23362405 23362484 -116954281 + GA-rich Low_complexity Low_complexity 3 79 0 2250 83 3 10 chr10 23365431 23365745 -116951020 - AluSx SINE Alu 0 312 1 21 36 0 0 chr10 23366387 23366415 -116950350 + AT_rich Low_complexity Low_complexity 1 28 0 195 42 0 0 chr10 23367413 23367437 -116949328 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 183 228 140 18 chr10 23368139 23368196 -116948569 - L2 LINE L2 0 3272 3209 441 0 0 0 chr10 23369304 23369353 -116947412 + (TG)n Simple_repeat Simple_repeat 2 50 0 211 213 27 0 chr10 23369354 23369429 -116947336 + GA-rich Low_complexity Low_complexity 2 78 0 26 50 0 0 chr10 23370734 23370774 -116945991 + GC_rich Low_complexity Low_complexity 1 40 0 29 60 0 0 chr10 23371224 23371274 -116945491 + GC_rich Low_complexity Low_complexity 1 50 0 279 0 0 0 chr10 23371535 23371566 -116945199 + (T)n Simple_repeat Simple_repeat 1 31 0 24 0 0 0 chr10 23371946 23371970 -116944795 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr10 23372385 23372406 -116944359 + AT_rich Low_complexity Low_complexity 1 21 0 2340 78 7 0 chr10 23374716 23375022 -116941743 + AluSx SINE Alu 3 310 -2 390 91 0 0 chr10 23377316 23377371 -116939394 + (TCC)n Simple_repeat Simple_repeat 2 56 0 393 22 0 0 chr10 23377550 23377596 -116939169 + (TGG)n Simple_repeat Simple_repeat 2 47 0 22 0 0 0 chr10 23382507 23382529 -116934236 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr10 23384780 23384811 -116931954 + GC_rich Low_complexity Low_complexity 1 31 0 208 121 0 0 chr10 23384835 23384868 -116931897 + (GGGGA)n Simple_repeat Simple_repeat 2 34 0 37 0 0 0 chr10 23385889 23385926 -116930839 + GC_rich Low_complexity Low_complexity 1 37 0 274 189 19 0 chr10 23389160 23389213 -116927552 - L2 LINE L2 -7 3265 3212 315 0 0 0 chr10 23390515 23390550 -116926215 + (TA)n Simple_repeat Simple_repeat 1 35 0 353 296 12 0 chr10 23390573 23390654 -116926111 + L2 LINE L2 3230 3311 -2 24 0 0 0 chr10 23391383 23391407 -116925358 + AT_rich Low_complexity Low_complexity 1 24 0 1559 199 3 3 chr10 23391633 23391924 -116924841 - AluJb SINE Alu -21 291 1 22 0 0 0 chr10 23392051 23392073 -116924692 + AT_rich Low_complexity Low_complexity 1 22 0 645 173 73 0 chr10 23392077 23392187 -116924578 + FLAM_C SINE Alu 1 118 -15 2204 96 0 10 chr10 23392201 23392513 -116924252 + AluY SINE Alu 1 309 -2 814 164 0 23 chr10 23392513 23392641 -116924124 - AluJo/FLAM SINE Alu -177 125 1 1796 131 0 0 chr10 23392968 23393228 -116923537 + AluSq SINE Alu 1 260 -53 200 33 0 33 chr10 23393237 23393267 -116923498 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1999 126 14 0 chr10 23393318 23393612 -116923153 + AluSx SINE Alu 1 298 -14 3032 145 32 21 chr10 23393613 23394177 -116922588 + L1MB3 LINE L1 5604 6173 -10 1912 129 0 14 chr10 23394178 23394472 -116922293 - AluSx SINE Alu -22 290 1 32 43 0 0 chr10 23394530 23394576 -116922189 + AT_rich Low_complexity Low_complexity 1 46 0 2113 101 24 7 chr10 23394705 23395001 -116921764 - AluSq SINE Alu -12 301 1 805 270 69 13 chr10 23395092 23395325 -116921440 + MLT2E LTR ERVL 8 253 -375 633 272 13 64 chr10 23395366 23395511 -116921254 + MLT2E LTR ERVL 338 468 -160 1629 167 7 17 chr10 23395511 23395811 -116920954 - AluJo SINE Alu -13 299 3 633 272 13 64 chr10 23395811 23395900 -116920865 + MLT2E LTR ERVL 468 560 -68 841 189 6 24 chr10 23395915 23396084 -116920681 - AluJo SINE Alu -74 238 73 1507 173 69 7 chr10 23396713 23397002 -116919763 + AluJb SINE Alu 5 311 -1 2048 115 3 7 chr10 23397010 23397314 -116919451 + AluSg1 SINE Alu 1 303 -6 685 229 0 0 chr10 23397578 23397709 -116919056 + AluJo/FLAM SINE Alu 1 131 -171 2092 144 0 0 chr10 23397712 23398024 -116918741 + AluSq SINE Alu 2 313 0 1648 160 7 14 chr10 23398037 23398319 -116918446 + AluJb SINE Alu 1 280 -32 759 91 0 0 chr10 23398347 23398446 -116918319 + HY3 scRNA scRNA 1 99 -2 1973 119 6 13 chr10 23399447 23399758 -116917007 - AluSx SINE Alu -3 309 1 1400 175 27 38 chr10 23400103 23400307 -116916458 - AluJb SINE Alu -23 289 87 2014 111 3 13 chr10 23400307 23400605 -116916160 - AluSp SINE Alu -18 295 1 1400 175 27 38 chr10 23400605 23400692 -116916073 - AluJb SINE Alu -225 87 1 1078 138 6 0 chr10 23400807 23400981 -116915784 - AluSg/x SINE Alu -4 308 134 2137 102 0 13 chr10 23400981 23401286 -116915479 - AluSq SINE Alu -12 301 1 1493 168 45 41 chr10 23401525 23401672 -116915093 - AluJb SINE Alu -19 293 148 2233 91 7 10 chr10 23401672 23401980 -116914785 - AluSp SINE Alu -6 307 1 1493 168 45 41 chr10 23401980 23402124 -116914641 - AluJb SINE Alu -164 148 1 180 0 0 0 chr10 23402930 23402950 -116913815 + (T)n Simple_repeat Simple_repeat 1 20 0 1982 122 17 0 chr10 23403010 23403305 -116913460 + AluSq SINE Alu 2 301 -12 1146 119 28 0 chr10 23403306 23403483 -116913282 + AluSg/x SINE Alu 124 305 -5 1458 135 82 50 chr10 23403490 23403626 -116913139 + AluJb SINE Alu 1 131 -181 1747 148 13 17 chr10 23403626 23403924 -116912841 + AluSx SINE Alu 1 297 -15 1458 135 82 50 chr10 23403924 23404068 -116912697 + AluJb SINE Alu 131 290 -22 26 50 0 0 chr10 23404197 23404237 -116912528 + AT_rich Low_complexity Low_complexity 1 40 0 1683 167 3 3 chr10 23404395 23404694 -116912071 + AluSx SINE Alu 1 299 -13 1442 168 21 10 chr10 23404744 23404906 -116911859 - AluJo SINE Alu -18 294 126 2048 114 7 0 chr10 23404906 23405204 -116911561 - AluSx SINE Alu -12 300 1 1442 168 21 10 chr10 23405204 23405332 -116911433 - AluJo SINE Alu -186 126 1 1980 118 7 3 chr10 23405805 23406094 -116910671 + AluSq SINE Alu 1 290 -23 1227 213 17 50 chr10 23406113 23406414 -116910351 + AluJo SINE Alu 2 292 -20 1146 93 43 0 chr10 23406474 23406636 -116910129 - AluSg/x SINE Alu -9 301 133 2159 116 0 0 chr10 23406637 23406939 -116909826 - AluSp SINE Alu -11 302 1 32 0 0 0 chr10 23406972 23407004 -116909761 + AT_rich Low_complexity Low_complexity 1 32 0 2010 120 0 3 chr10 23407005 23407297 -116909468 - AluSp SINE Alu -22 291 1 382 298 61 8 chr10 23407521 23407652 -116909113 - MIR SINE MIR -3 259 122 2223 88 3 0 chr10 23408382 23408676 -116908089 + AluSp SINE Alu 1 295 -18 1483 201 7 0 chr10 23409201 23409485 -116907280 - AluJo SINE Alu -26 286 1 26 0 0 0 chr10 23409582 23409608 -116907157 + AT_rich Low_complexity Low_complexity 1 26 0 1710 163 7 3 chr10 23409608 23409897 -116906868 - AluSx SINE Alu -22 290 1 1184 94 0 39 chr10 23409929 23410090 -116906675 - AluSg/x SINE Alu -18 294 139 1972 100 13 48 chr10 23410090 23410253 -116906512 - AluSx SINE Alu -12 300 152 2019 101 28 0 chr10 23410253 23410541 -116906224 - AluSp SINE Alu -17 296 1 1972 100 13 48 chr10 23410541 23410688 -116906077 - AluSx SINE Alu -160 152 1 1184 94 0 39 chr10 23410688 23410707 -116906058 - AluSg/x SINE Alu -173 139 121 705 150 9 0 chr10 23410917 23411030 -116905735 - FLAM_A SINE Alu -5 137 24 1835 121 6 58 chr10 23411038 23411351 -116905414 - AluSx SINE Alu -9 303 7 391 286 172 67 chr10 23411354 23411697 -116905068 - L1MEc LINE L1 -4515 1795 1417 288 280 86 31 chr10 23411698 23411881 -116904884 - L1MEc LINE L1 -4862 1257 1055 2074 118 13 0 chr10 23411881 23412187 -116904578 - AluY SINE Alu -1 310 1 288 280 86 31 chr10 23412187 23412260 -116904505 - L1MEc LINE L1 -5064 1055 987 1850 104 45 7 chr10 23412641 23412928 -116903837 - AluSg SINE Alu -12 298 1 1832 100 86 4 chr10 23413178 23413457 -116903308 - AluSx SINE Alu -10 302 1 1785 158 3 3 chr10 23414053 23414350 -116902415 - AluSx SINE Alu -15 297 1 2137 86 22 32 chr10 23414430 23414743 -116902022 - AluSg SINE Alu 0 310 1 243 0 0 0 chr10 23414808 23414835 -116901930 + (T)n Simple_repeat Simple_repeat 1 27 0 21 0 0 0 chr10 23415273 23415294 -116901471 + AT_rich Low_complexity Low_complexity 1 21 0 1726 157 11 0 chr10 23415303 23415589 -116901176 - AluSx SINE Alu -2 310 22 851 172 7 0 chr10 23415591 23415742 -116901023 - AluJo SINE Alu -158 154 3 2248 99 0 3 chr10 23415907 23416210 -116900555 - AluSq SINE Alu -11 302 1 199 140 0 53 chr10 23416270 23416327 -116900438 + (TTTTC)n Simple_repeat Simple_repeat 3 56 0 285 261 34 34 chr10 23416331 23416450 -116900315 + CT-rich Low_complexity Low_complexity 3 121 0 1546 229 114 73 chr10 23416464 23416844 -116899921 - HAL1 LINE L1 -606 1901 1538 1946 140 3 3 chr10 23416844 23417144 -116899621 - AluSx SINE Alu -12 300 1 1546 229 114 73 chr10 23417144 23417158 -116899607 - HAL1 LINE L1 -969 1538 1526 2143 126 7 0 chr10 23417158 23417468 -116899297 - AluSx SINE Alu 0 312 1 1546 229 114 73 chr10 23417468 23417837 -116898928 - HAL1 LINE L1 -981 1526 1106 269 205 116 4 chr10 23417889 23417958 -116898807 - AluJ/FLAM SINE Alu -236 66 1 2039 95 3 33 chr10 23417972 23418277 -116898488 - AluSc SINE Alu -13 296 1 2114 107 7 0 chr10 23418327 23418637 -116898128 - AluSq SINE Alu -1 312 1 248 278 120 73 chr10 23418641 23418718 -116898047 - HAL1 LINE L1 -1429 1078 1006 209 56 0 28 chr10 23418718 23418754 -116898011 + (TTTAA)n Simple_repeat Simple_repeat 3 37 0 1873 133 3 0 chr10 23418754 23419039 -116897726 - AluSx SINE Alu -26 286 1 248 278 120 73 chr10 23419039 23419192 -116897573 - HAL1 LINE L1 -1501 1006 862 1823 108 36 46 chr10 23419192 23419497 -116897268 - AluSp SINE Alu -11 302 1 2093 92 46 0 chr10 23419498 23419779 -116896986 - AluSx SINE Alu -18 294 1 248 278 120 73 chr10 23419779 23419886 -116896879 - HAL1 LINE L1 -1644 863 721 286 260 96 110 chr10 23420014 23420379 -116896386 - HAL1 LINE L1 -1995 512 153 414 251 262 55 chr10 23421082 23421429 -116895336 - MLT1K LTR MaLR -167 421 3 2336 99 3 3 chr10 23421454 23421767 -116894998 - AluSq SINE Alu 0 313 1 534 141 10 61 chr10 23421896 23421995 -116894770 + FRAM SINE Alu 77 170 -6 828 138 0 66 chr10 23422049 23422201 -116894564 - FLAM_C SINE Alu 0 143 2 28 0 0 0 chr10 23422209 23422237 -116894528 + AT_rich Low_complexity Low_complexity 1 28 0 385 243 86 111 chr10 23422283 23422603 -116894162 - L1M4 LINE L1 -1273 4873 4563 2096 121 14 0 chr10 23422603 23422893 -116893872 - AluSg SINE Alu -15 295 2 385 243 86 111 chr10 23422893 23422967 -116893798 - L1M4 LINE L1 -1583 4563 4489 3757 184 42 65 chr10 23422971 23423527 -116893238 - L1MB4 LINE L1 -3 6177 5610 2183 80 28 3 chr10 23423527 23423815 -116892950 - AluSp SINE Alu -18 295 1 3757 184 42 65 chr10 23423815 23423946 -116892819 - L1MB4 LINE L1 -570 5610 5478 1296 236 51 20 chr10 23423946 23424101 -116892664 - AluJo SINE Alu 0 302 153 222 37 0 0 chr10 23424101 23424128 -116892637 + (CCA)n Simple_repeat Simple_repeat 2 28 0 1296 236 51 20 chr10 23424128 23424265 -116892500 - AluJo SINE Alu -149 153 1 3757 184 42 65 chr10 23424265 23424754 -116892011 - L1MB4 LINE L1 -702 5478 4979 2020 102 0 48 chr10 23424754 23425075 -116891690 - AluSg SINE Alu 0 307 1 3757 184 42 65 chr10 23425075 23425328 -116891437 - L1MB4 LINE L1 -1201 4979 4722 2264 109 0 0 chr10 23425328 23425621 -116891144 - AluSp SINE Alu -19 294 2 3757 184 42 65 chr10 23425621 23425842 -116890923 - L1MB4 LINE L1 -1458 4722 4583 2381 109 0 0 chr10 23425842 23426153 -116890612 - AluSq SINE Alu -1 312 2 3757 184 42 65 chr10 23426153 23426296 -116890469 - L1MB4 LINE L1 -1597 4583 4438 1940 81 12 0 chr10 23426326 23426573 -116890192 - AluSp SINE Alu -1 312 63 281 95 0 0 chr10 23426573 23426615 -116890150 - L1M4c LINE L1 -6326 58 17 * 1125 206 124 57 chr10 23426614 23426759 -116890006 - L1MD1 LINE L1 -197 6045 5911 2013 133 7 0 chr10 23426759 23427053 -116889712 + AluSx SINE Alu 1 296 -16 1125 206 124 57 chr10 23427053 23427306 -116889459 - L1MD1 LINE L1 -331 5911 5433 2296 78 0 0 chr10 23427308 23427628 -116889137 - AluY SINE Alu 0 320 1 1057 178 138 40 chr10 23427639 23427886 -116888879 - AluJo SINE Alu -21 291 21 426 156 3 46 chr10 23427899 23427990 -116888775 - L1MD1 LINE L1 -802 5440 5362 659 183 0 0 chr10 23427990 23428094 -116888671 - U6 snRNA snRNA -3 104 1 426 156 3 46 chr10 23428094 23428139 -116888626 - L1MD1 LINE L1 -880 5362 5317 1544 82 0 10 chr10 23428163 23428357 -116888408 + AluSp SINE Alu 108 299 -14 1144 212 79 80 chr10 23428358 23428817 -116887948 - L1MDa LINE L1 -3464 3076 2618 2055 137 0 3 chr10 23428817 23429123 -116887642 - AluSg SINE Alu -5 305 1 1793 181 0 0 chr10 23429123 23429422 -116887343 - AluJo SINE Alu -13 299 1 1144 212 79 80 chr10 23429422 23429462 -116887303 - L1MDa LINE L1 -3921 2619 2580 1914 146 10 16 chr10 23429462 23429771 -116886994 - AluSx SINE Alu -5 307 1 1144 212 79 80 chr10 23429771 23429853 -116886912 - L1MDa LINE L1 -3960 2580 2499 1940 147 14 0 chr10 23429853 23430139 -116886626 - AluSq SINE Alu -18 295 6 1144 212 79 80 chr10 23430139 23430216 -116886549 - L1MDa LINE L1 -4041 2499 2404 2378 86 3 0 chr10 23430328 23430629 -116886136 - AluSp SINE Alu -11 302 1 2608 268 52 38 chr10 23430637 23431332 -116885433 - L1MDa LINE L1 -5452 1088 288 2255 96 7 0 chr10 23431332 23431634 -116885131 - AluSx SINE Alu -8 304 1 2608 268 52 38 chr10 23431634 23431926 -116884839 - L1MDa LINE L1 -6252 288 2 1021 225 205 10 chr10 23431917 23432108 -116884657 - L1MEc LINE L1 -2958 3257 3105 * 1882 123 7 32 chr10 23432108 23432451 -116884314 - AluSg1 SINE Alu 0 309 1 1021 225 205 10 chr10 23432451 23432771 -116883994 - L1MEc LINE L1 -3110 3105 2634 818 175 12 31 chr10 23432782 23432942 -116883823 - AluJo/FRAM SINE Alu -22 290 134 2296 92 7 0 chr10 23432942 23433237 -116883528 - AluSx SINE Alu -15 297 1 1283 155 97 54 chr10 23433261 23433414 -116883351 - AluJb SINE Alu -22 290 145 2214 122 3 0 chr10 23433414 23433725 -116883040 - AluSp SINE Alu -1 312 1 306 73 0 0 chr10 23433729 23433770 -116882995 + (TG)n Simple_repeat Simple_repeat 2 42 0 1283 155 97 54 chr10 23433770 23433889 -116882876 - AluJb SINE Alu -169 143 1 2381 264 60 37 chr10 23434146 23435203 -116881562 - L1MEc LINE L1 -5308 1088 8 3190 222 131 98 chr10 23435213 23436133 -116880632 - L1MEc LINE L1 -743 5472 4584 1890 146 37 3 chr10 23436133 23436427 -116880338 - AluSx SINE Alu -8 304 1 3190 222 131 98 chr10 23436427 23436805 -116879960 - L1MEc LINE L1 -1631 4584 4220 690 223 7 14 chr10 23436805 23436944 -116879821 - MER74A LTR ERVL 0 558 421 3190 222 131 98 chr10 23436944 23437134 -116879631 - L1MEc LINE L1 -1995 4220 4038 1501 118 49 37 chr10 23437134 23437380 -116879385 - AluSx SINE Alu -63 249 1 3190 222 131 98 chr10 23437380 23437923 -116878842 - L1MEc LINE L1 -2177 4038 3514 4495 117 13 11 chr10 23437923 23438557 -116878208 - MER41B LTR ERV1 0 635 1 3190 222 131 98 chr10 23438557 23438695 -116878070 - L1MEc LINE L1 -2701 3514 3382 297 0 0 0 chr10 23438695 23438728 -116878037 + (TTTTA)n Simple_repeat Simple_repeat 1 33 0 1852 154 0 18 chr10 23438728 23439013 -116877752 - AluSx SINE Alu -32 280 1 3190 222 131 98 chr10 23439013 23439407 -116877358 - L1MEc LINE L1 -2832 3383 2445 1855 157 0 37 chr10 23439424 23439748 -116877017 - AluSx SINE Alu 0 312 1 2355 68 10 0 chr10 23439759 23440055 -116876710 - AluY SINE Alu -12 299 1 272 233 105 0 chr10 23440057 23440143 -116876622 - L1MEc LINE L1 -4004 2392 2298 2367 97 0 0 chr10 23440148 23440447 -116876318 - AluSp SINE Alu -14 299 1 3223 202 71 27 chr10 23440474 23440978 -116875787 - L1MB7 LINE L1 -106 6078 5597 2147 110 3 29 chr10 23440978 23441287 -116875478 - AluSx SINE Alu -11 301 1 3223 202 71 27 chr10 23441287 23441395 -116875370 - L1MB7 LINE L1 -587 5597 5495 2067 130 3 16 chr10 23441395 23441711 -116875054 - AluSx SINE Alu 0 312 1 3223 202 71 27 chr10 23441711 23442192 -116874573 - L1MB7 LINE L1 -689 5495 4936 1352 278 95 52 chr10 23442260 23443079 -116873686 - L1MEc LINE L1 -4382 2014 1145 2320 93 3 3 chr10 23443079 23443379 -116873386 - AluSp SINE Alu -13 300 1 1352 278 95 52 chr10 23443379 23443523 -116873242 - L1MEc LINE L1 -5251 1145 1009 906 186 11 11 chr10 23443523 23443700 -116873065 - FRAM SINE Alu 0 176 1 2351 83 0 7 chr10 23443906 23444206 -116872559 - AluY SINE Alu -13 298 1 1985 138 0 39 chr10 23444217 23444528 -116872237 - AluSg SINE Alu -11 299 1 2420 70 3 7 chr10 23444561 23444862 -116871903 - AluY SINE Alu -11 300 1 1895 113 39 53 chr10 23444873 23445042 -116871723 - MER7C DNA MER2_type -2665 363 200 1826 157 78 28 chr10 23445042 23445399 -116871366 + THE1C LTR MaLR 1 375 0 1895 113 39 53 chr10 23445399 23445566 -116871199 - MER7C DNA MER2_type -2828 200 32 1233 133 76 4 chr10 23445577 23445626 -116871139 + Tigger7 DNA MER2_type 2247 2291 -196 1904 126 19 35 chr10 23445626 23445936 -116870829 - AluSx SINE Alu -7 305 1 1233 133 76 4 chr10 23445936 23446111 -116870654 + Tigger7 DNA MER2_type 2291 2487 0 452 312 141 44 chr10 23446111 23446406 -116870359 - L2 LINE L2 -680 2634 2369 2004 141 10 3 chr10 23446406 23446704 -116870061 + AluSx SINE Alu 1 300 -12 452 312 141 44 chr10 23446704 23446975 -116869790 - L2 LINE L2 -945 2369 2013 1708 187 82 41 chr10 23446985 23447379 -116869386 - MSTB LTR MaLR -1 400 1 2543 48 3 0 chr10 23447389 23447684 -116869081 - AluY SINE Alu -15 296 1 2258 85 0 10 chr10 23447684 23447979 -116868786 - AluSc SINE Alu -17 292 1 804 173 0 0 chr10 23448003 23448130 -116868635 - FLAM_C SINE Alu -16 127 1 279 188 0 50 chr10 23448213 23448314 -116868451 + (TA)n Simple_repeat Simple_repeat 1 96 0 262 322 0 0 chr10 23448325 23448412 -116868353 - L1MC4 LINE L1 -1342 6700 6614 236 261 45 23 chr10 23448334 23448422 -116868343 + L1MC4 LINE L1 6614 6703 -1339 * 1906 145 3 19 chr10 23448429 23448740 -116868025 - AluJb SINE Alu -6 306 1 2168 107 3 3 chr10 23449278 23449578 -116867187 - AluSp SINE Alu -13 300 1 2049 124 10 0 chr10 23450122 23450413 -116866352 + AluSx SINE Alu 1 294 -18 1541 161 9 82 chr10 23450634 23450964 -116865801 + AluJb SINE Alu 1 306 -6 339 225 159 84 chr10 23451471 23451576 -116865189 - L1MC4 LINE L1 -1864 5944 5848 2088 124 16 10 chr10 23451576 23451882 -116864883 - AluSx SINE Alu -3 309 2 339 225 159 84 chr10 23451882 23452167 -116864598 - L1MC4 LINE L1 -1960 5848 5525 351 158 87 47 chr10 23452190 23452317 -116864448 - L1MC4 LINE L1 -2340 5468 5337 1354 156 176 4 chr10 23452337 23452593 -116864172 - AluSg1 SINE Alu -9 300 1 819 224 6 18 chr10 23452841 23453006 -116863759 - FRAM SINE Alu -12 164 2 180 219 0 0 chr10 23453399 23453440 -116863325 + C-rich Low_complexity Low_complexity 3 43 0 1547 168 24 40 chr10 23453460 23453757 -116863008 - AluJo SINE Alu -20 292 1 884 259 39 65 chr10 23453770 23453861 -116862904 - L1MEd LINE L1 -2708 3421 3329 2246 109 3 0 chr10 23453861 23454155 -116862610 - AluSx SINE Alu -17 295 1 884 259 39 65 chr10 23454155 23454553 -116862212 - L1MEd LINE L1 -2800 3329 2945 1511 134 4 35 chr10 23454555 23454816 -116861949 - AluJb SINE Alu 0 312 60 301 243 0 0 chr10 23454851 23454925 -116861840 - L1MEd LINE L1 -3176 2953 2880 24 0 0 0 chr10 23455083 23455107 -116861658 + AT_rich Low_complexity Low_complexity 1 24 0 2055 145 10 0 chr10 23455240 23455537 -116861228 - AluSx SINE Alu -12 300 1 2393 62 0 28 chr10 23455960 23456280 -116860485 - AluY SINE Alu 0 311 1 429 306 97 49 chr10 23456328 23456616 -116860149 - L1MEd LINE L1 -4874 1245 972 1581 183 38 3 chr10 23456616 23456905 -116859860 - AluJo SINE Alu -13 299 1 429 306 97 49 chr10 23456905 23457161 -116859604 - L1MEd LINE L1 -5147 972 661 2079 145 3 0 chr10 23457161 23457472 -116859293 + AluSx SINE Alu 1 312 0 429 306 97 49 chr10 23457472 23457599 -116859166 - L1MEd LINE L1 -5458 661 541 2092 107 13 19 chr10 23457785 23458093 -116858672 + AluSp SINE Alu 1 306 -7 1118 32 0 0 chr10 23458241 23458365 -116858400 + AluSp/q SINE Alu 174 297 -16 26 30 0 0 chr10 23459630 23459663 -116857102 + AT_rich Low_complexity Low_complexity 1 33 0 25 0 0 0 chr10 23460152 23460177 -116856588 + AT_rich Low_complexity Low_complexity 1 25 0 27 0 0 0 chr10 23460269 23460296 -116856469 + AT_rich Low_complexity Low_complexity 1 27 0 3604 230 115 22 chr10 23460586 23460880 -116855885 - L1MC4 LINE L1 0 8042 7777 1971 149 3 7 chr10 23460880 23461188 -116855577 - AluSx SINE Alu -3 309 3 3604 230 115 22 chr10 23461188 23462107 -116854658 - L1MC4 LINE L1 -265 7777 6636 1870 143 17 20 chr10 23462120 23462414 -116854351 + AluSx SINE Alu 1 293 -19 2240 98 3 3 chr10 23462416 23462711 -116854054 + AluSg SINE Alu 1 295 -15 1256 116 0 0 chr10 23462711 23462875 -116853890 + AluSg/x SINE Alu 132 295 -15 470 246 166 0 chr10 23462913 23463100 -116853665 - L1MC4 LINE L1 -1363 6679 6462 1576 174 4 29 chr10 23463109 23463390 -116853375 - AluJb SINE Alu -38 274 1 272 292 81 47 chr10 23463490 23463726 -116853039 - L1M4 LINE L1 -1159 4987 4744 315 0 0 0 chr10 23463887 23463922 -116852843 + (CA)n Simple_repeat Simple_repeat 2 36 0 1679 198 7 7 chr10 23464471 23464764 -116852001 - AluJb SINE Alu -19 293 1 1285 203 23 62 chr10 23465049 23465355 -116851410 - AluJo SINE Alu -8 294 1 207 0 0 0 chr10 23465365 23465388 -116851377 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 2471 47 0 13 chr10 23466252 23466550 -116850215 - AluY SINE Alu -17 294 1 1997 122 13 45 chr10 23466573 23466884 -116849881 - AluSq SINE Alu -12 301 1 230 232 10 61 chr10 23467033 23467132 -116849633 - L1MC5 LINE L1 -51 7910 7817 1860 195 49 42 chr10 23467149 23467600 -116849165 - MLT1C LTR MaLR -13 454 1 1018 238 49 121 chr10 23467601 23467845 -116848920 - MLT1C-int LTR MaLR -1 1734 1474 1742 127 45 4 chr10 23467845 23468113 -116848652 + AluSx SINE Alu 11 289 -23 1018 238 49 121 chr10 23468113 23468351 -116848414 - MLT1C-int LTR MaLR -261 1474 946 852 188 0 0 chr10 23468491 23468629 -116848136 + FAM SINE Alu 1 48 -1 1252 183 20 36 chr10 23468629 23468911 -116847854 - MER47B DNA MER2_type -84 334 2 1390 187 41 10 chr10 23468961 23469255 -116847510 - AluJb SINE Alu -9 303 1 1784 158 121 36 chr10 23469385 23469772 -116846993 + Tigger1 DNA MER2_type 2 421 -1997 4404 147 33 4 chr10 23469772 23470495 -116846270 + Tigger1 DNA MER2_type 1326 2069 -349 661 195 53 0 chr10 23470499 23470612 -116846153 + FLAM_C SINE Alu 2 119 -24 394 228 0 0 chr10 23470634 23470713 -116846052 + Tigger1 DNA MER2_type 2109 2187 -231 2221 100 13 3 chr10 23470837 23471136 -116845629 - AluSp SINE Alu -11 302 1 778 281 105 46 chr10 23471329 23471674 -116845091 - L1M4c LINE L1 -4582 2377 2054 1778 168 0 34 chr10 23471674 23471995 -116844770 - AluJo SINE Alu -2 310 1 778 281 105 46 chr10 23471995 23472325 -116844440 - L1M4c LINE L1 -4905 2054 1662 687 211 107 30 chr10 23472350 23472620 -116844145 - L1M4c LINE L1 -5361 1498 1208 312 226 68 23 chr10 23473113 23473246 -116843519 - L1M4c LINE L1 -5923 936 798 249 190 0 0 chr10 23473336 23473394 -116843371 - L1MA7 LINE L1 -2 6289 6232 192 77 0 0 chr10 23473400 23473426 -116843339 + (CA)n Simple_repeat Simple_repeat 1 26 0 668 290 62 53 chr10 23473436 23473757 -116843008 - L1M4c LINE L1 -6049 810 487 1026 243 84 13 chr10 23473803 23474112 -116842653 - L1M4c LINE L1 -6489 370 40 32 26 0 0 chr10 23474137 23474176 -116842589 + AT_rich Low_complexity Low_complexity 1 39 0 2332 90 0 37 chr10 23474503 23474825 -116841940 - AluSq SINE Alu -1 312 3 332 261 72 14 chr10 23476190 23476328 -116840437 + MIR SINE MIR 110 255 -7 2264 118 3 0 chr10 23476431 23476737 -116840028 + AluSx SINE Alu 2 308 -4 1801 177 0 13 chr10 23477139 23477450 -116839315 + AluSx SINE Alu 2 308 -4 1854 133 29 42 chr10 23477458 23477766 -116838999 + AluJo SINE Alu 1 304 -8 2362 103 3 0 chr10 23478694 23479005 -116837760 + AluSp SINE Alu 1 312 -1 22 0 0 0 chr10 23479488 23479510 -116837255 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr10 23480096 23480124 -116836641 + AT_rich Low_complexity Low_complexity 1 28 0 198 103 0 0 chr10 23480589 23480618 -116836147 + (TA)n Simple_repeat Simple_repeat 1 29 0 785 154 60 20 chr10 23481391 23481540 -116835225 + AluJb SINE Alu 133 287 -25 1875 116 37 34 chr10 23481745 23482039 -116834726 + AluSg SINE Alu 1 295 -15 778 172 0 0 chr10 23482154 23482282 -116834483 - AluSg/x SINE Alu -14 298 171 1754 124 27 8 chr10 23482283 23482542 -116834223 - AluSg SINE Alu -44 266 3 375 23 0 0 chr10 23482544 23482588 -116834177 + (CA)n Simple_repeat Simple_repeat 2 45 0 2360 68 26 23 chr10 23483437 23483746 -116833019 - AluSg SINE Alu 0 310 1 321 243 27 0 chr10 23483862 23483936 -116832829 + Tigger5 DNA MER2_type 1 76 -2247 396 205 0 0 chr10 23483939 23484017 -116832748 - Tigger5 DNA MER2_type -4 2319 2242 24 53 0 0 chr10 23484169 23484207 -116832558 + AT_rich Low_complexity Low_complexity 1 38 0 1960 109 32 3 chr10 23484216 23484501 -116832264 - AluSq SINE Alu -20 293 1 1916 59 4 43 chr10 23484506 23484762 -116832003 - AluY SINE Alu -15 296 51 2444 58 0 3 chr10 23484769 23485063 -116831702 - AluY SINE Alu -18 293 1 21 36 0 0 chr10 23485122 23485150 -116831615 + GC_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr10 23485412 23485436 -116831329 + AT_rich Low_complexity Low_complexity 1 24 0 1748 145 16 35 chr10 23485665 23485982 -116830783 - AluJo SINE Alu -1 311 1 2299 242 70 27 chr10 23486212 23486964 -116829801 - MER21B LTR ERV1 -60 803 19 321 195 65 26 chr10 23486988 23487065 -116829700 - MER21B LTR ERV1 -776 87 8 185 152 0 30 chr10 23487342 23487375 -116829390 - MIR SINE MIR -145 117 86 572 184 54 78 chr10 23489918 23490163 -116826602 - MSTC LTR MaLR -151 245 3 997 207 51 113 chr10 23490581 23491094 -116825671 - L1MC4 LINE L1 -6 8036 7556 586 312 19 31 chr10 23491252 23491611 -116825154 - MLT1F-int LTR MaLR -770 601 247 1066 246 112 57 chr10 23491759 23491950 -116824815 - MLT1F LTR MaLR 0 542 363 2154 117 3 19 chr10 23491950 23492259 -116824506 - AluSx SINE Alu -8 304 1 1983 116 33 23 chr10 23492259 23492562 -116824203 - AluSx SINE Alu -6 306 1 1066 246 112 57 chr10 23492562 23492772 -116823993 - MLT1F LTR MaLR -178 364 118 184 125 0 42 chr10 23492790 23492838 -116823927 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 234 137 20 0 chr10 23492844 23492895 -116823870 - L1MB4 LINE L1 -2 6178 6127 233 214 236 0 chr10 23492919 23493008 -116823757 - MLT1F LTR MaLR -432 110 1 471 208 72 8 chr10 23493008 23493133 -116823632 - L1MC4 LINE L1 -763 7279 7147 787 178 13 32 chr10 23493347 23493504 -116823261 + FRAM SINE Alu 13 166 -10 806 210 75 50 chr10 23493949 23494337 -116822428 + LTR40b LTR ERVL 1 462 0 2504 58 0 13 chr10 23494548 23494859 -116821906 + AluY SINE Alu 2 308 -3 21 0 0 0 chr10 23494951 23494972 -116821793 + AT_rich Low_complexity Low_complexity 1 21 0 1650 146 158 47 chr10 23494996 23495381 -116821384 - MSTA LTR MaLR 0 428 1 26 30 0 0 chr10 23495938 23495971 -116820794 + AT_rich Low_complexity Low_complexity 1 33 0 187 349 0 15 chr10 23496045 23496111 -116820654 - L2 LINE L2 -8 3305 3241 468 253 57 0 chr10 23496331 23496489 -116820276 - MER104 DNA Tc2 -13 167 1 404 217 160 0 chr10 23496658 23496764 -116820001 + MIR SINE MIR 114 236 -26 1552 168 66 11 chr10 23496941 23497215 -116819550 + AluJo SINE Alu 1 289 -23 2467 238 75 35 chr10 23497227 23497501 -116819264 - L1MC4 LINE L1 -155 7887 7625 1769 127 35 0 chr10 23497501 23497760 -116819005 + AluSx SINE Alu 26 293 -19 2467 238 75 35 chr10 23497760 23498532 -116818233 - L1MC4 LINE L1 -417 7625 6799 1875 134 19 0 chr10 23498896 23499164 -116817601 - AluSx SINE Alu -19 293 21 953 126 0 0 chr10 23499238 23499381 -116817384 - AluSp/q SINE Alu -6 307 165 403 175 0 0 chr10 23499381 23499444 -116817321 - AluS SINE Alu -246 63 1 198 0 0 0 chr10 23499444 23499466 -116817299 + (T)n Simple_repeat Simple_repeat 1 22 0 1675 173 0 29 chr10 23499635 23499948 -116816817 - AluJo SINE Alu -8 304 1 1410 109 5 0 chr10 23500084 23500277 -116816488 - AluSq SINE Alu -4 309 116 3225 294 66 17 chr10 23500503 23501677 -116815088 - HERVL40 LTR ERVL -2769 2761 1530 503 202 0 0 chr10 23501679 23501768 -116814997 - MER58C DNA MER1_type 0 215 127 629 249 75 19 chr10 23501861 23502074 -116814691 - HERVL40 LTR ERVL -3995 1535 1311 545 174 0 0 chr10 23502078 23502164 -116814601 + AluJ/FLAM SINE Alu 1 86 -226 300 244 70 43 chr10 23502196 23502311 -116814454 - HERVL40 LTR ERVL -4218 1312 1195 1014 251 67 25 chr10 23502317 23502644 -116814121 - HERVL40 LTR ERVL -5188 342 2 1762 149 41 28 chr10 23502707 23503509 -116813256 - MER21B LTR ERV1 -49 814 70 286 136 17 17 chr10 23503622 23503681 -116813084 - MER21A LTR ERV1 -864 67 9 229 109 91 0 chr10 23503681 23503736 -116813029 + (TTATA)n Simple_repeat Simple_repeat 5 64 0 451 123 71 18 chr10 23503736 23503906 -116812859 + (TA)n Simple_repeat Simple_repeat 2 180 0 1155 254 70 14 chr10 23503957 23504315 -116812450 - LTR40b LTR ERVL -84 378 1 549 274 82 21 chr10 23504406 23504708 -116812057 - MLT1J1 LTR MaLR -129 321 1 372 283 105 47 chr10 23504730 23504988 -116811777 - HAL1b LINE L1 -14 1334 1062 918 163 11 45 chr10 23504988 23505166 -116811599 + AluJo SINE Alu 104 275 -37 284 256 0 0 chr10 23505184 23505266 -116811499 - HAL1b LINE L1 -331 1017 936 332 301 65 0 chr10 23505284 23505407 -116811358 - MLT1L LTR MaLR -6 609 479 2196 92 3 7 chr10 23505587 23505882 -116810883 + AluSq SINE Alu 1 294 -19 2398 94 0 0 chr10 23505893 23506202 -116810563 + AluSx SINE Alu 1 309 -3 2259 112 0 16 chr10 23506535 23506847 -116809918 - AluSx SINE Alu -1 311 5 826 224 125 13 chr10 23506895 23507208 -116809557 - HAL1b LINE L1 -579 769 422 364 321 77 24 chr10 23507294 23507462 -116809303 - HAL1b LINE L1 -1096 252 76 1579 176 36 13 chr10 23508148 23508449 -116808316 - AluJb SINE Alu -4 308 1 187 384 41 0 chr10 23509123 23509196 -116807569 - L3 LINE CR1 -1273 304 229 2071 140 3 3 chr10 23509441 23509748 -116807017 + AluSx SINE Alu 1 307 -5 2448 66 0 3 chr10 23510372 23510674 -116806091 - AluY SINE Alu -10 301 1 297 263 174 54 chr10 23510695 23510893 -116805872 - L1ME LINE L1 -324 5797 5559 651 209 0 16 chr10 23510893 23511022 -116805743 + FLAM_A SINE Alu 1 127 -6 297 263 174 54 chr10 23511022 23511082 -116805683 - L1ME LINE L1 -562 5559 5508 23 78 0 0 chr10 23511266 23511317 -116805448 + AT_rich Low_complexity Low_complexity 1 51 0 2491 118 6 3 chr10 23512200 23512563 -116804202 - THE1B LTR MaLR 0 364 1 1737 178 0 4 chr10 23512619 23512895 -116803870 - AluJb SINE Alu -37 275 1 444 252 110 62 chr10 23513016 23513435 -116803330 - MLT1H LTR MaLR -107 448 52 318 118 0 78 chr10 23513519 23513605 -116803160 + AluJo SINE Alu 80 139 -163 1136 188 109 33 chr10 23513608 23513884 -116802881 + AluJb SINE Alu 1 297 -15 21 0 0 0 chr10 23514271 23514292 -116802473 + AT_rich Low_complexity Low_complexity 1 21 0 2125 114 0 0 chr10 23514553 23514888 -116801877 - AluSg SINE Alu 0 335 1 2320 109 0 0 chr10 23515419 23515730 -116801035 - AluY SINE Alu 0 311 1 401 283 160 11 chr10 23515865 23516052 -116800713 + MIR SINE MIR 48 262 0 1590 255 80 34 chr10 23516090 23516589 -116800176 - L2 LINE L2 -434 2880 2352 2474 191 43 74 chr10 23516589 23517234 -116799531 - MLT1E2 LTR MaLR -1 625 1 1590 255 80 34 chr10 23517234 23517286 -116799479 - L2 LINE L2 -962 2352 2304 412 248 69 41 chr10 23517715 23517893 -116798872 - MIR SINE MIR -63 145 17 2203 113 0 7 chr10 23518468 23518778 -116797987 + AluSg SINE Alu 3 310 0 1327 101 0 0 chr10 23519343 23519511 -116797254 + AluSq SINE Alu 1 168 -145 950 142 0 17 chr10 23519531 23519707 -116797058 + (GGAGAA)n Simple_repeat Simple_repeat 3 175 0 438 232 0 0 chr10 23519720 23519832 -116796933 + GA-rich Low_complexity Low_complexity 49 160 0 2160 110 0 17 chr10 23520237 23520538 -116796227 - AluSx SINE Alu -16 296 1 2107 131 3 0 chr10 23522117 23522415 -116794350 + AluSx SINE Alu 1 299 -13 23 33 0 0 chr10 23522820 23522850 -116793915 + AT_rich Low_complexity Low_complexity 1 30 0 204 240 0 0 chr10 23523217 23523267 -116793498 + (TA)n Simple_repeat Simple_repeat 2 51 0 516 156 3 75 chr10 23523329 23523450 -116793315 - L1MD3 LINE L1 -13 7982 7655 1674 115 11 19 chr10 23526645 23526905 -116789860 + AluSq SINE Alu 1 258 -55 2128 245 199 92 chr10 23527223 23528266 -116788499 - L2 LINE L2 -1090 2224 885 715 162 0 0 chr10 23528266 23528377 -116788388 + FLAM_C SINE Alu 1 111 -32 2128 245 199 92 chr10 23528377 23528666 -116788099 - L2 LINE L2 -2429 885 628 1425 196 49 28 chr10 23528669 23528995 -116787770 - MER58B DNA MER1_type -1 340 8 1159 276 138 21 chr10 23529006 23529520 -116787245 - L2 LINE L2 -2736 578 5 493 84 0 0 chr10 23529690 23529761 -116787004 - L1MA4 LINE L1 -9 6291 6221 2274 111 0 3 chr10 23530486 23530792 -116785973 + AluSx SINE Alu 2 306 -6 1611 229 88 27 chr10 23531511 23532022 -116784743 - L1ME1 LINE L1 -21 6145 5604 2086 105 3 10 chr10 23532045 23532341 -116784424 - AluY SINE Alu -17 294 1 655 182 120 47 chr10 23532342 23532600 -116784165 - L1ME1 LINE L1 -752 5394 5118 2088 118 10 0 chr10 23532888 23533184 -116783581 - AluSq SINE Alu -14 299 1 300 230 0 0 chr10 23533287 23533361 -116783404 - L1MCa LINE L1 -1791 4635 4562 1495 157 57 21 chr10 23533363 23533643 -116783122 - AluJb SINE Alu -22 290 1 2098 235 81 35 chr10 23533808 23533852 -116782913 - L1MCa LINE L1 -3039 3387 3346 2173 113 3 0 chr10 23533852 23534154 -116782611 + AluSx SINE Alu 1 303 -9 1796 112 15 4 chr10 23534154 23534411 -116782354 + AluSq SINE Alu 44 305 -8 2098 235 81 35 chr10 23534411 23535156 -116781609 - L1MCa LINE L1 -3080 3346 2529 731 126 0 0 chr10 23535156 23535259 -116781506 - U6 snRNA snRNA -4 103 1 2098 235 81 35 chr10 23535259 23535534 -116781231 - L1MCa LINE L1 -3897 2529 2268 * 4906 212 74 24 chr10 23535525 23536874 -116779891 - L1MCa LINE L1 -4815 1611 195 1375 112 0 0 chr10 23536885 23537072 -116779693 - AluSp SINE Alu -4 309 123 2026 113 10 10 chr10 23537077 23537370 -116779395 - AluY SINE Alu -5 306 14 480 220 60 27 chr10 23537370 23537520 -116779245 - L1MCa LINE L1 -6252 174 20 902 184 126 95 chr10 23537521 23537824 -116778941 - L1MEc LINE L1 -3118 3097 2774 1756 85 89 26 chr10 23537824 23538095 -116778670 - AluSc SINE Alu -4 305 18 902 184 126 95 chr10 23538095 23538252 -116778513 - L1MEc LINE L1 -3441 2774 2623 992 220 55 124 chr10 23538306 23538451 -116778314 - L1MEc LINE L1 -3900 2496 2343 2280 125 0 0 chr10 23538451 23538763 -116778002 - AluSx SINE Alu 0 312 1 992 220 55 124 chr10 23538763 23538789 -116777976 - L1MEc LINE L1 -4053 2343 2317 1980 136 3 13 chr10 23538789 23539105 -116777660 - AluSp SINE Alu 0 313 1 992 220 55 124 chr10 23539105 23539262 -116777503 - L1MEc LINE L1 -4079 2317 2151 1402 157 114 0 chr10 23539262 23539517 -116777248 - AluSx SINE Alu -28 284 1 992 220 55 124 chr10 23539517 23539900 -116776865 - L1MEc LINE L1 -4245 2151 1833 2212 104 3 3 chr10 23539900 23540208 -116776557 + AluSc SINE Alu 1 308 -1 992 220 55 124 chr10 23540208 23540235 -116776530 - L1MEc LINE L1 -4563 1833 1806 610 203 112 21 chr10 23540256 23540399 -116776366 + Tigger7 DNA MER2_type 4 159 -2328 568 272 61 78 chr10 23540414 23541038 -116775727 - L1MEc LINE L1 -4581 1815 1203 23 0 0 0 chr10 23541154 23541177 -116775588 + AT_rich Low_complexity Low_complexity 1 23 0 259 214 38 145 chr10 23543033 23543164 -116773601 - L2 LINE L2 0 3313 3197 1957 120 32 0 chr10 23544549 23544832 -116771933 - AluSx SINE Alu -18 294 3 1380 161 42 110 chr10 23544891 23545025 -116771740 + AluJb SINE Alu 1 143 -169 1775 170 11 0 chr10 23545025 23545302 -116771463 + AluJb SINE Alu 3 282 -30 1380 161 42 110 chr10 23545302 23545502 -116771263 + AluJb SINE Alu 143 312 0 378 0 0 0 chr10 23545686 23545728 -116771037 + (TG)n Simple_repeat Simple_repeat 2 43 0 713 168 10 149 chr10 23545729 23545937 -116770828 - AluY SINE Alu -26 285 107 1391 98 0 5 chr10 23545938 23546122 -116770643 - AluSg SINE Alu -127 183 1 198 0 0 0 chr10 23546836 23546858 -116769907 + (T)n Simple_repeat Simple_repeat 1 22 0 198 103 0 0 chr10 23548481 23548510 -116768255 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 182 268 36 0 chr10 23548510 23548566 -116768199 - L2 LINE L2 -300 2972 2915 * 358 242 248 0 chr10 23548561 23548710 -116768055 - MIR SINE MIR 0 262 77 617 281 26 70 chr10 23548770 23548998 -116767767 - MER20 DNA MER1_type 0 219 2 2124 82 43 3 chr10 23549665 23549947 -116766818 + AluY SINE Alu 1 293 -18 2418 90 0 0 chr10 23549956 23550268 -116766497 + AluSx SINE Alu 1 312 0 232 255 0 0 chr10 23550496 23550547 -116766218 - MIR SINE MIR -19 243 193 1746 166 29 26 chr10 23550897 23551240 -116765525 + MER2 DNA MER2_type 1 344 0 410 264 41 8 chr10 23551376 23551497 -116765268 + L2 LINE L2 3148 3272 0 1989 131 0 3 chr10 23551613 23551920 -116764845 - AluSc SINE Alu 0 306 1 848 72 88 0 chr10 23553004 23553129 -116763636 + MER85 DNA T2_type 1 136 -3 997 151 42 26 chr10 23553203 23553395 -116763370 - MER46A DNA MER2_type 0 236 42 2081 117 33 0 chr10 23553719 23554018 -116762747 - AluSx SINE Alu -3 309 1 1992 113 58 0 chr10 23554213 23554487 -116762278 + AluSx SINE Alu 7 296 -16 212 264 138 11 chr10 23554877 23554964 -116761801 - MIR SINE MIR -161 101 4 820 163 65 0 chr10 23557265 23557418 -116759347 - AluSq SINE Alu -14 299 137 955 175 0 48 chr10 23557507 23557696 -116759069 - FRAM SINE Alu 0 176 1 238 281 55 85 chr10 23557766 23558001 -116758764 + L2 LINE L2 2149 2376 -938 2215 95 0 24 chr10 23558865 23559159 -116757606 - AluSx SINE Alu -25 287 1 24 67 0 0 chr10 23559910 23559955 -116756810 + AT_rich Low_complexity Low_complexity 1 45 0 1965 135 3 3 chr10 23560218 23560521 -116756244 + AluSx SINE Alu 1 303 0 553 155 9 9 chr10 23563064 23563180 -116753585 + (TA)n Simple_repeat Simple_repeat 2 117 0 228 391 71 18 chr10 23563234 23563459 -116753306 - L2 LINE L2 -527 2787 2551 26 64 0 0 chr10 23563891 23563938 -116752827 + AT_rich Low_complexity Low_complexity 1 47 0 184 326 0 0 chr10 23564361 23564410 -116752355 + L2 LINE L2 2581 2629 -685 1827 147 3 29 chr10 23565402 23565709 -116751056 + AluSx SINE Alu 3 301 -11 252 0 0 0 chr10 23565839 23565867 -116750898 + (TTA)n Simple_repeat Simple_repeat 2 29 0 687 161 0 0 chr10 23565875 23565987 -116750778 - FLAM_C SINE Alu -31 112 1 1662 170 13 27 chr10 23566004 23566304 -116750461 - AluJo SINE Alu -16 296 1 578 307 31 21 chr10 23567130 23567456 -116749309 - L1MEd LINE L1 -4869 1250 922 293 193 0 0 chr10 23567559 23567616 -116749149 - L1MC4 LINE L1 0 8042 7986 784 239 56 0 chr10 23567617 23567814 -116748951 - L1MC4 LINE L1 -140 7902 7695 364 259 9 9 chr10 23567934 23568042 -116748723 - L1MC4 LINE L1 -697 7345 7238 779 172 89 6 chr10 23568043 23568212 -116748553 - L1MC4 LINE L1 -970 7072 6890 828 181 39 44 chr10 23568221 23568403 -116748362 - MLT1E2 LTR MaLR -3 623 443 517 192 32 16 chr10 23568413 23568538 -116748227 - MLT1E2 LTR MaLR -293 333 207 1318 133 133 8 chr10 23568576 23568816 -116747949 - AluSx SINE Alu -2 310 41 352 267 188 34 chr10 23568821 23568997 -116747768 - MLT1E2 LTR MaLR -420 204 2 253 236 81 34 chr10 23569081 23569229 -116747536 - L1MEd LINE L1 -5284 835 681 653 259 125 102 chr10 23569234 23569666 -116747099 - L1MEd LINE L1 -5473 646 205 27 29 0 0 chr10 23569706 23569740 -116747025 + AT_rich Low_complexity Low_complexity 1 34 0 329 73 0 0 chr10 23569837 23569878 -116746887 - MER4E LTR ERV1 -73 693 653 279 292 0 0 chr10 23569879 23569951 -116746814 - L1MEd LINE L1 -6046 73 2 298 258 72 0 chr10 23569988 23570085 -116746680 + L2 LINE L2 1868 1971 -1343 713 312 36 24 chr10 23570300 23570547 -116746218 + L2 LINE L2 2598 2847 -467 225 254 0 30 chr10 23570560 23570627 -116746138 - LTR67 LTR ERVL -3 554 490 2213 110 3 0 chr10 23570702 23571003 -116745762 + AluSq SINE Alu 1 302 -11 13630 206 52 41 chr10 23571440 23572385 -116744380 - L1M2 LINE L1 -2 7003 6070 2258 114 0 0 chr10 23572385 23572691 -116744074 - AluSx SINE Alu -5 307 2 13630 206 52 41 chr10 23572691 23575117 -116741648 - L1M2 LINE L1 -935 6070 3672 1903 136 3 11 chr10 23575117 23575403 -116741362 - AluSx SINE Alu -26 286 3 252 77 0 0 chr10 23575413 23575452 -116741313 + (TCTCG)n Simple_repeat Simple_repeat 2 40 0 2159 118 0 0 chr10 23575454 23575741 -116741024 - AluSc SINE Alu -22 287 1 13630 206 52 41 chr10 23575741 23577067 -116739698 - L1M2 LINE L1 -3341 3664 2354 2300 96 0 3 chr10 23577067 23577360 -116739405 - AluSg SINE Alu -18 292 1 13630 206 52 41 chr10 23577360 23577526 -116739239 - L1M2 LINE L1 -4651 2354 2191 1751 167 43 0 chr10 23577526 23577825 -116738940 - AluSx SINE Alu 0 312 1 13630 206 52 41 chr10 23577825 23577846 -116738919 - L1M2 LINE L1 -4814 2191 2172 261 0 0 0 chr10 23577846 23577875 -116738890 + (TC)n Simple_repeat Simple_repeat 2 30 0 234 0 0 0 chr10 23577874 23577900 -116738865 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 13630 206 52 41 chr10 23577875 23578234 -116738531 - L1M2 LINE L1 -4833 2172 1592 917 185 0 123 chr10 23578338 23578614 -116738151 + AluJb SINE Alu 69 310 -2 577 271 73 18 chr10 23579475 23579693 -116737072 + MIR SINE MIR 3 232 -30 21 71 0 0 chr10 23579913 23579955 -116736810 + AT_rich Low_complexity Low_complexity 1 42 0 271 288 133 61 chr10 23583714 23584208 -116732557 - L2 LINE L2 -37 3276 2736 319 277 70 56 chr10 23584361 23584574 -116732191 - L2 LINE L2 -566 2748 2533 1134 129 12 0 chr10 23584581 23584751 -116732014 - AluSg/x SINE Alu -25 285 114 373 183 49 24 chr10 23584881 23584963 -116731802 - AluS SINE Alu -218 84 1 720 296 246 14 chr10 23584966 23585462 -116731303 - L2 LINE L2 -778 2536 1926 548 183 0 0 chr10 23585462 23585555 -116731210 + AluJb SINE Alu 136 228 -84 317 269 321 15 chr10 23585610 23586068 -116730697 - L2 LINE L2 -1433 1881 1284 2229 89 3 3 chr10 23586369 23586661 -116730104 + AluSg SINE Alu 1 292 -18 914 197 61 22 chr10 23587006 23587234 -116729531 + L2 LINE L2 1897 2133 -1181 5681 244 89 16 chr10 23587341 23588802 -116727963 - L1M2 LINE L1 -5279 1570 3 273 260 0 0 chr10 23588888 23588938 -116727827 + L1M2 LINE L1 844 893 -5956 291 313 31 0 chr10 23588966 23589062 -116727703 - MIR SINE MIR -75 187 89 315 310 103 7 chr10 23589481 23589636 -116727129 + L2 LINE L2 1962 2131 -1183 528 330 145 46 chr10 23589676 23589793 -116726972 + L2 LINE L2 2383 2487 -785 2661 30 3 0 chr10 23589793 23590094 -116726671 - AluY SINE Alu -9 302 1 528 330 145 46 chr10 23590094 23590773 -116725992 + L2 LINE L2 2487 3263 -9 215 125 25 0 chr10 23590773 23590813 -116725952 + GA-rich Low_complexity Low_complexity 4 44 0 559 266 90 41 chr10 23591494 23591739 -116725026 - MIR SINE MIR -5 257 3 2235 103 23 0 chr10 23591833 23592133 -116724632 - AluSx SINE Alu -5 307 1 1629 145 52 45 chr10 23592335 23592645 -116724120 - AluJb SINE Alu 0 312 1 500 288 103 52 chr10 23592998 23593269 -116723496 - MER102a DNA MER1_type 0 330 46 223 321 88 15 chr10 23593313 23593450 -116723315 + L2 LINE L2 2221 2367 -947 314 314 102 0 chr10 23593484 23593602 -116723163 + MIR SINE MIR 49 178 -84 189 331 108 29 chr10 23593630 23593769 -116722996 + L2 LINE L2 2375 2524 -790 2189 113 3 0 chr10 23593890 23594181 -116722584 + AluSx SINE Alu 1 292 -20 1597 152 18 73 chr10 23594190 23594518 -116722247 + AluJo SINE Alu 1 310 -2 355 274 87 115 chr10 23594541 23594793 -116721972 + L2 LINE L2 3028 3272 0 186 43 0 0 chr10 23594950 23594973 -116721792 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1077 197 10 25 chr10 23594977 23595175 -116721590 - AluJo SINE Alu -31 281 87 1233 178 53 0 chr10 23595378 23595586 -116721179 - MER20 DNA MER1_type 0 219 1 310 242 121 0 chr10 23696075 23696166 -116620599 - MIR SINE MIR -33 229 128 22 70 0 0 chr10 23696681 23696724 -116620041 + AT_rich Low_complexity Low_complexity 1 43 0 236 241 17 0 chr10 23696886 23696944 -116619821 + 5S rRNA rRNA 34 92 -29 2208 126 0 0 chr10 23697147 23697448 -116619317 + AluSx SINE Alu 1 301 -11 4003 83 3 23 chr10 23697538 23697658 -116619107 - MER41A LTR ERV1 0 554 433 2243 85 3 0 chr10 23697658 23697975 -116618790 + AluSp SINE Alu 1 318 0 4003 83 3 23 chr10 23697975 23698418 -116618347 - MER41A LTR ERV1 -121 433 1 346 238 101 70 chr10 23698421 23698648 -116618117 - L1MEc LINE L1 -4103 2293 2060 752 105 65 0 chr10 23698737 23698861 -116617904 + MLT1C LTR MaLR 1 132 -335 2049 107 0 11 chr10 23699138 23699453 -116617312 - AluSg SINE Alu 0 316 5 1457 106 5 0 chr10 23699785 23699974 -116616791 + AluSx SINE Alu 1 190 -122 13607 138 29 21 chr10 23700258 23700297 -116616468 + Tigger1 DNA MER2_type 17 54 -2364 2188 116 0 0 chr10 23700297 23700591 -116616174 - AluY SINE Alu -17 294 1 13607 138 29 21 chr10 23700591 23702814 -116613951 + Tigger1 DNA MER2_type 54 2301 -117 2175 120 0 10 chr10 23702814 23703122 -116613643 - AluSx SINE Alu -7 305 1 13607 138 29 21 chr10 23703122 23703241 -116613524 + Tigger1 DNA MER2_type 2301 2418 0 738 277 146 17 chr10 23703242 23703653 -116613112 - L1ME3A LINE L1 -51 6119 5656 3938 160 23 12 chr10 23703699 23704435 -116612330 + Tigger2 DNA MER2_type 1 744 -1974 1011 169 94 0 chr10 23704492 23704705 -116612060 + Tigger2 DNA MER2_type 2486 2718 0 771 285 99 21 chr10 23704718 23705150 -116611615 - L1ME3A LINE L1 -595 5575 5178 210 71 0 0 chr10 23705150 23705178 -116611587 + (TA)n Simple_repeat Simple_repeat 2 29 0 1616 208 3 0 chr10 23705178 23705466 -116611299 - AluJb SINE Alu -20 292 4 771 285 99 21 chr10 23705466 23706050 -116610715 - L1ME3A LINE L1 -991 5179 4475 875 193 0 0 chr10 23706050 23706200 -116610565 + AluJo SINE Alu 1 150 -162 419 161 0 0 chr10 23706309 23706396 -116610369 + L1ME LINE L1 5118 5204 -942 465 197 8 63 chr10 23706443 23706570 -116610195 - LTR40b LTR ERVL -54 408 289 520 255 106 34 chr10 23706744 23706952 -116609813 - HERVL40 LTR ERVL -4371 1159 937 186 158 84 116 chr10 23706957 23707052 -116609713 + MIR SINE MIR 50 141 -121 597 237 19 121 chr10 23707052 23707309 -116609456 - HERVL40 LTR ERVL -4703 827 597 1441 263 50 64 chr10 23707360 23707938 -116608827 - HERVL40 LTR ERVL -4960 570 1 1398 198 52 27 chr10 23707939 23708267 -116608498 - LTR40b LTR ERVL 0 462 127 2280 58 30 30 chr10 23708299 23708594 -116608171 + AluY SINE Alu 1 295 -16 406 198 0 22 chr10 23708644 23708735 -116608030 - MLT1F LTR MaLR -289 253 165 246 62 0 0 chr10 23708735 23708767 -116607998 + (TA)n Simple_repeat Simple_repeat 1 32 0 * 492 18 0 0 chr10 23708766 23708823 -116607942 + (GA)n Simple_repeat Simple_repeat 2 58 0 340 188 0 0 chr10 23708857 23708921 -116607844 + L1MC4 LINE L1 6640 6703 -1339 330 26 0 0 chr10 23708926 23708965 -116607800 + (TG)n Simple_repeat Simple_repeat 2 40 0 748 244 0 0 chr10 23708967 23709123 -116607642 - MLT1F LTR MaLR -380 162 7 349 252 56 0 chr10 23709130 23709237 -116607528 + L1MD3 LINE L1 7869 7981 -14 720 181 100 38 chr10 23709267 23709427 -116607338 + AluJo SINE Alu 138 307 -5 1688 216 40 47 chr10 23709435 23709625 -116607140 + L1ME LINE L1 5209 5399 -765 2332 108 0 0 chr10 23709625 23709921 -116606844 + AluSg SINE Alu 1 296 -14 1688 216 40 47 chr10 23709921 23710313 -116606452 + L1ME LINE L1 5399 5783 -381 329 258 33 8 chr10 23710308 23710428 -116606337 - L1M4 LINE L1 -884 5262 5140 * 881 222 19 5 chr10 23710479 23710691 -116606074 - LTR52-int LTR ERVL -1081 2475 2261 3249 182 40 13 chr10 23710835 23711518 -116605247 - LTR52-int LTR ERVL -3587 2098 1398 981 261 4 8 chr10 23711716 23711976 -116604789 + MIR SINE MIR 1 259 -3 312 332 153 37 chr10 23712519 23712787 -116603978 + L3 LINE CR1 1042 1340 -237 1981 133 0 3 chr10 23712788 23713074 -116603691 + AluSx SINE Alu 1 285 -27 23 33 0 0 chr10 23713080 23713110 -116603655 + AT_rich Low_complexity Low_complexity 1 30 0 589 72 80 0 chr10 23713110 23713374 -116603391 + (TA)n Simple_repeat Simple_repeat 1 285 0 261 299 0 0 chr10 23713374 23713441 -116603324 + L3 LINE CR1 1366 1432 -145 269 213 33 0 chr10 23713740 23713801 -116602964 + L2 LINE L2 3210 3272 0 2241 108 0 7 chr10 23713978 23714285 -116602480 - AluSx SINE Alu -7 305 1 322 198 151 38 chr10 23714581 23714687 -116602078 + L2 LINE L2 3192 3309 -4 283 294 59 15 chr10 23714728 23714864 -116601901 + MLT1J2 LTR MaLR 67 208 -242 2026 115 35 0 chr10 23715213 23715501 -116601264 - AluSx SINE Alu -12 300 3 1453 117 49 12 chr10 23715657 23715904 -116600861 + L1PA10 LINE L1 5891 6146 -22 619 148 23 0 chr10 23715906 23715920 -116600845 + GA-rich Low_complexity Low_complexity 1 13 -242 611 26 13 0 chr10 23715920 23715997 -116600768 + (GGAGA)n Simple_repeat Simple_repeat 2 79 0 619 148 23 0 chr10 23715997 23716156 -116600609 + GA-rich Low_complexity Low_complexity 13 255 0 365 123 0 0 chr10 23716156 23716213 -116600552 + (GGAA)n Simple_repeat Simple_repeat 2 58 0 230 270 95 0 chr10 23716721 23716784 -116599981 - L3 LINE CR1 -19 1558 1490 1745 159 19 30 chr10 23716794 23717164 -116599601 + MER47A DNA MER2_type 1 366 0 246 143 16 32 chr10 23717252 23717315 -116599450 + T-rich Low_complexity Low_complexity 3 64 0 397 285 60 33 chr10 23717316 23717467 -116599298 + MIR3 SINE MIR 47 201 -7 268 152 0 0 chr10 23718260 23718306 -116598459 - Tigger2 DNA MER2_type -2671 47 2 937 211 139 28 chr10 23718444 23718763 -116598002 - MLT1A1 LTR MaLR -13 413 1 1281 220 9 88 chr10 23718769 23719224 -116597541 - L1ME LINE L1 -392 5778 5360 1937 107 33 0 chr10 23719261 23719532 -116597233 + AluY SINE Alu 32 311 0 255 327 222 33 chr10 23719936 23720453 -116596312 + L2 LINE L2 1435 2049 -1265 326 359 101 29 chr10 23720489 23720765 -116596000 + L2 LINE L2 2219 2514 -800 397 48 81 0 chr10 23720797 23720859 -116595906 - L1MA9 LINE L1 -1 6311 6245 272 246 17 76 chr10 23721482 23721600 -116595165 + MLT2E LTR ERVL 32 142 -486 185 135 243 0 chr10 23722145 23722182 -116594583 - MIR SINE MIR -119 143 98 801 317 117 41 chr10 23722196 23722735 -116594030 - L1M4 LINE L1 -2873 3771 3274 2481 77 0 0 chr10 23722735 23723046 -116593719 - AluY SINE Alu 0 311 1 801 317 117 41 chr10 23723046 23723483 -116593282 - L1M4 LINE L1 -3370 3274 2721 468 240 138 30 chr10 23723908 23724241 -116592524 - L1MC5 LINE L1 -36 7925 7557 1403 131 0 31 chr10 23724343 23724572 -116592193 + AluSg/x SINE Alu 90 311 -1 1598 213 41 61 chr10 23724618 23724987 -116591778 - L1MB7 LINE L1 -8 6176 5820 1563 172 6 57 chr10 23724987 23725301 -116591464 - AluJo SINE Alu -14 298 1 1598 213 41 61 chr10 23725301 23725470 -116591295 - L1MB7 LINE L1 -364 5820 5649 1312 250 46 23 chr10 23725452 23726130 -116590635 - L1M4 LINE L1 -4187 2459 1672 * 1830 167 68 36 chr10 23726130 23726573 -116590192 - LTR2B LTR ERV1 0 490 34 3806 218 97 79 chr10 23726592 23727065 -116589700 - L1M4 LINE L1 -4865 1677 1214 2156 105 17 3 chr10 23727065 23727361 -116589404 + AluSx SINE Alu 1 300 -12 3806 218 97 79 chr10 23727361 23727500 -116589265 - L1M4 LINE L1 -5328 1214 1079 1715 153 47 0 chr10 23727500 23727774 -116588991 + AluSx SINE Alu 1 287 -25 3806 218 97 79 chr10 23727774 23728639 -116588126 - L1M4 LINE L1 -5463 1079 164 1875 167 3 6 chr10 23728639 23728951 -116587814 - AluJo SINE Alu -1 311 1 3806 218 97 79 chr10 23728951 23729114 -116587651 - L1M4 LINE L1 -6378 164 5 533 266 77 40 chr10 23729133 23729486 -116587279 - L1M4 LINE L1 -2148 3998 3633 536 213 37 37 chr10 23729491 23729655 -116587110 - L1MD2 LINE L1 0 6359 6196 267 298 26 18 chr10 23729666 23729780 -116586985 - L1MD2 LINE L1 -226 6133 6019 4734 123 31 89 chr10 23729780 23730206 -116586559 - MER4D LTR ERV1 0 903 454 412 119 0 0 chr10 23730206 23730273 -116586492 - Alu SINE Alu -9 303 237 4734 123 31 89 chr10 23730273 23730738 -116586027 - MER4D LTR ERV1 -449 454 1 2326 85 0 14 chr10 23730896 23731191 -116585574 - AluSx SINE Alu -21 291 1 1340 119 19 5 chr10 23731191 23731401 -116585364 - MER41E LTR ERV1 -299 213 1 429 237 30 46 chr10 23731512 23731643 -116585122 + MER3 DNA MER1_type 80 208 -1 1410 275 73 14 chr10 23731645 23732686 -116584079 - L1M4 LINE L1 -2820 3326 2225 2293 122 0 0 chr10 23732825 23733128 -116583637 - AluSx SINE Alu -9 303 1 398 274 0 25 chr10 23733227 23733281 -116583484 - L1MA10 LINE L1 -3 6331 6278 2513 244 51 20 chr10 23733281 23734333 -116582432 - L1ME1 LINE L1 -44 6122 5038 2155 115 0 3 chr10 23734333 23734637 -116582128 - AluY SINE Alu -8 303 1 2513 244 51 20 chr10 23734637 23734731 -116582034 - L1ME1 LINE L1 -1128 5038 4948 1502 161 3 71 chr10 23734733 23735057 -116581708 - AluJb SINE Alu -10 302 1 1195 244 85 16 chr10 23735060 23735507 -116581258 - L1ME1 LINE L1 -2060 4086 3609 363 278 163 4 chr10 23735520 23735790 -116580975 - L1ME1 LINE L1 -2697 3449 3137 2353 94 3 0 chr10 23735816 23736125 -116580640 - AluSp SINE Alu -3 310 1 1815 137 0 4 chr10 23736225 23736495 -116580270 + AluSg SINE Alu 37 305 -5 949 265 43 4 chr10 23736500 23736734 -116580031 + MIR SINE MIR 20 262 0 2437 79 0 0 chr10 23736982 23737287 -116579478 + AluY SINE Alu 1 305 -6 19636 48 0 3 chr10 23737335 23739883 -116576882 + L1P LINE L1 2 2543 -3603 6087 80 28 33 chr10 23739884 23741191 -116575574 + SVA Other Other 3 936 -450 2807 52 3 0 chr10 23741191 23741520 -116575245 + LTR5 LTR ERVK 1 330 -639 7319 88 22 20 chr10 23742112 23743180 -116573585 + MER11C LTR ERVK 1 1071 0 2107 106 3 10 chr10 23743572 23743864 -116572901 + AluSc SINE Alu 1 290 -19 2303 114 0 0 chr10 23744099 23744405 -116572360 + AluSx SINE Alu 1 306 -6 2173 155 85 19 chr10 23744406 23744889 -116571876 - L1MB8 LINE L1 -24 6154 5640 3727 166 65 55 chr10 23744889 23745792 -116570973 - MER21A LTR ERV1 -6 925 14 214 356 148 15 chr10 23745826 23745961 -116570804 + L2 LINE L2 3116 3268 -4 262 352 14 35 chr10 23746594 23746616 -116570149 - MIR3 SINE MIR -18 190 169 1990 106 29 0 chr10 23746616 23746939 -116569826 + AluSx SINE Alu 1 331 0 262 352 14 35 chr10 23746939 23747057 -116569708 - MIR3 SINE MIR -39 169 52 1470 124 22 9 chr10 23748085 23748311 -116568454 + MER30 DNA MER1_type 1 229 -1 277 158 35 35 chr10 23748468 23748525 -116568240 + L2 LINE L2 3214 3270 -2 3442 198 68 53 chr10 23749159 23749209 -116567556 - L1MB4 LINE L1 0 6180 6132 2096 137 0 9 chr10 23749209 23749524 -116567241 - AluSq SINE Alu -1 312 1 3442 198 68 53 chr10 23749524 23750413 -116566352 - L1MB4 LINE L1 -48 6132 5258 2193 110 3 3 chr10 23750413 23750713 -116566052 + AluSq SINE Alu 12 311 -2 3442 198 68 53 chr10 23750713 23750789 -116565976 - L1MB4 LINE L1 -922 5258 5185 866 165 0 0 chr10 23750789 23750916 -116565849 - FLAM_C SINE Alu -6 127 1 3442 198 68 53 chr10 23750916 23751611 -116565154 - L1MB4 LINE L1 -995 5185 4451 239 287 0 69 chr10 23751746 23751847 -116564918 - L1ME LINE L1 -285 5885 5792 1633 208 112 7 chr10 23751847 23752265 -116564500 - MLT1C LTR MaLR 0 467 6 557 259 77 33 chr10 23752285 23752559 -116564206 - L1ME LINE L1 -342 5779 5494 264 298 21 0 chr10 23752725 23752819 -116563946 - MIR SINE MIR -98 164 69 584 199 23 23 chr10 23753010 23753181 -116563584 - L1MC5 LINE L1 -39 7922 7752 238 341 0 8 chr10 23753217 23753343 -116563422 - L1MB4 LINE L1 -2409 3737 3613 1935 130 7 20 chr10 23753496 23753658 -116563107 - AluSx SINE Alu -16 296 138 2344 79 3 25 chr10 23753658 23753975 -116562790 - AluY SINE Alu 0 311 2 1935 130 7 20 chr10 23753975 23754112 -116562653 - AluSx SINE Alu -174 138 1 315 289 58 8 chr10 23754112 23754343 -116562422 - L1MEc LINE L1 -3861 2354 2150 434 330 107 12 chr10 23754699 23755277 -116561488 - HAL1 LINE L1 -785 1722 1090 329 280 79 37 chr10 23755339 23755528 -116561237 - L1MEc LINE L1 -5193 1012 816 313 282 161 0 chr10 23755697 23755821 -116560944 - L1MEc LINE L1 -5734 471 328 2453 83 0 0 chr10 23755969 23756270 -116560495 + AluY SINE Alu 1 301 -10 392 340 104 24 chr10 23756785 23757206 -116559559 + L2 LINE L2 2201 2655 -659 479 202 0 11 chr10 23757607 23757701 -116559064 + Tigger2 DNA MER2_type 2611 2703 -15 1294 104 0 0 chr10 23758095 23758258 -116558507 - AluSg/x SINE Alu -13 299 137 1261 143 196 14 chr10 23758511 23758791 -116557974 + MER44D DNA MER2_type 9 609 0 2305 106 3 6 chr10 23759409 23759720 -116557045 - AluSq SINE Alu -3 310 1 515 86 14 0 chr10 23760047 23760117 -116556648 - AluJ/FRAM SINE Alu -18 294 224 5314 146 9 1 chr10 23760124 23761004 -116555761 + Tigger1 DNA MER2_type 28 914 -1504 2065 85 4 0 chr10 23761077 23761336 -116555429 + AluSg SINE Alu 34 293 -17 1960 126 4 7 chr10 23762486 23762764 -116554001 + AluSx SINE Alu 4 280 -32 204 40 0 0 chr10 23762764 23762789 -116553976 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 596 106 11 53 chr10 23762791 23762885 -116553880 - FLAM_A SINE Alu -25 117 28 23 54 0 0 chr10 23763129 23763166 -116553599 + AT_rich Low_complexity Low_complexity 1 37 0 26 30 0 0 chr10 23763545 23763578 -116553187 + AT_rich Low_complexity Low_complexity 1 33 0 276 100 0 0 chr10 23763829 23763869 -116552896 + (A)n Simple_repeat Simple_repeat 1 40 0 22820 33 7 6 chr10 23764306 23767865 -116548900 + L1PA4 LINE L1 2594 6155 0 185 298 0 0 chr10 23767926 23767973 -116548792 - L2 LINE L2 -705 2609 2563 207 311 132 33 chr10 23768100 23768312 -116548453 - L2 LINE L2 -932 2382 2150 415 226 83 45 chr10 23768462 23768595 -116548170 + L2 LINE L2 3175 3312 -1 2231 114 3 0 chr10 23768995 23769294 -116547471 - AluY SINE Alu -11 300 1 1847 142 3 42 chr10 23769345 23769461 -116547304 - AluSx SINE Alu -15 297 178 2244 152 22 0 chr10 23769461 23769817 -116546948 + THE1B LTR MaLR 1 364 0 1847 142 3 42 chr10 23769817 23770009 -116546756 - AluSx SINE Alu -134 178 1 1425 171 24 38 chr10 23770355 23770647 -116546118 + AluJb SINE Alu 1 288 -24 2033 104 57 0 chr10 23770959 23771238 -116545527 - AluSg SINE Alu -15 295 1 269 253 6 133 chr10 23771707 23771873 -116544892 + MIR SINE MIR 118 262 0 252 165 237 62 chr10 23772315 23772412 -116544353 - MIR SINE MIR -28 234 121 5314 149 34 26 chr10 23772903 23774150 -116542615 - L1MA4 LINE L1 0 6300 5048 1208 206 7 0 chr10 23774151 23774432 -116542333 + L1M4 LINE L1 2551 2833 -3313 1409 116 0 0 chr10 23774705 23774919 -116541846 - AluSc SINE Alu 0 311 98 2139 116 3 3 chr10 23775556 23775850 -116540915 + AluSx SINE Alu 1 294 -18 1477 178 56 86 chr10 23775964 23776408 -116540357 + MER63B DNA MER1_type 6 436 0 21 36 0 0 chr10 23777707 23777735 -116539030 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 23778221 23778243 -116538522 + AT_rich Low_complexity Low_complexity 1 22 0 1626 96 27 0 chr10 23778775 23778994 -116537771 - AluSg/x SINE Alu -2 308 84 244 326 87 33 chr10 23779613 23779705 -116537060 - MIR SINE MIR -137 125 29 229 178 133 0 chr10 23779849 23779894 -116536871 - L2 LINE L2 -5 3308 3258 570 226 35 31 chr10 23779895 23780090 -116536675 - L1ME LINE L1 -506 5615 5423 6293 199 48 39 chr10 23780094 23780456 -116536309 - L1MB5 LINE L1 0 6174 5817 288 0 0 0 chr10 23780456 23780488 -116536277 + (TG)n Simple_repeat Simple_repeat 2 33 0 2455 71 3 0 chr10 23780498 23780808 -116535957 - AluY SINE Alu 0 311 1 6293 199 48 39 chr10 23780808 23783026 -116533739 - L1MB5 LINE L1 -365 5809 3578 577 238 129 43 chr10 23783026 23783261 -116533504 - L1MB5 LINE L1 -2864 3282 3014 2279 112 0 10 chr10 23783261 23783574 -116533191 - AluSx SINE Alu -2 310 1 577 238 129 43 chr10 23783574 23783640 -116533125 - L1MB5 LINE L1 -3132 3014 2955 1108 190 7 84 chr10 23783740 23783968 -116532797 - Tigger1 DNA MER2_type -2156 262 59 2293 92 0 0 chr10 23783968 23784262 -116532503 + AluY SINE Alu 1 294 -17 1108 190 7 84 chr10 23784262 23784317 -116532448 - Tigger1 DNA MER2_type -2359 59 1 1662 186 0 0 chr10 23785068 23785347 -116531418 + AluSx SINE Alu 6 284 -28 468 0 0 0 chr10 23785347 23785399 -116531366 + (CA)n Simple_repeat Simple_repeat 2 53 0 2025 201 81 3 chr10 23785608 23785992 -116530773 - MER47B DNA MER2_type -3 415 2 265 270 145 20 chr10 23785998 23786150 -116530615 + L1MC/D LINE L1 4877 5047 -1099 478 289 74 42 chr10 23786336 23786648 -116530117 + L1MC/D LINE L1 5308 5629 -2179 208 147 0 0 chr10 23786677 23786711 -116530054 + (TATG)n Simple_repeat Simple_repeat 1 34 0 15309 177 38 14 chr10 23786973 23791000 -116525765 + L1PA13 LINE L1 1981 6113 -50 2329 148 52 2 chr10 23791113 23791519 -116525246 - MSTA LTR MaLR 0 428 3 6828 212 162 35 chr10 23791644 23792238 -116524527 + L1MDa LINE L1 94 611 -5929 2118 109 0 29 chr10 23792238 23792549 -116524216 + AluSx SINE Alu 6 307 -5 6828 212 162 35 chr10 23792549 23793013 -116523752 + L1MDa LINE L1 611 1014 -5526 2234 112 3 0 chr10 23793013 23793316 -116523449 + AluSx SINE Alu 1 304 -8 6828 212 162 35 chr10 23793316 23794452 -116522313 + L1MDa LINE L1 1014 2569 -3971 234 0 0 0 chr10 23794461 23794487 -116522278 + (CA)n Simple_repeat Simple_repeat 2 27 0 4303 252 40 41 chr10 23794541 23795449 -116521316 + L1MDa LINE L1 2486 3393 -3147 1973 139 10 3 chr10 23795449 23795752 -116521013 + AluSx SINE Alu 1 305 -7 4303 252 40 41 chr10 23795752 23796393 -116520372 + L1MDa LINE L1 3393 4001 -2539 2044 140 0 7 chr10 23796393 23796693 -116520072 + AluSq SINE Alu 1 298 -15 4303 252 40 41 chr10 23796693 23796781 -116519984 + L1MDa LINE L1 4001 4088 -2452 1250 181 47 106 chr10 23796781 23797168 -116519597 + MLT1A1 LTR MaLR 2 365 0 7277 211 58 28 chr10 23797168 23798849 -116517916 + MLT1A1-int LTR MaLR 1 1731 -4 1131 185 41 123 chr10 23798861 23799251 -116517514 + MLT1A1 LTR MaLR 1 358 -7 1062 236 30 27 chr10 23799254 23799555 -116517210 + L1MDa LINE L1 4085 4386 -2154 718 147 147 12 chr10 23799567 23799834 -116516931 + MER1B DNA MER1_type 1 339 0 1906 233 29 14 chr10 23799841 23800403 -116516362 + L1MDa LINE L1 4398 4967 -1573 1276 165 169 0 chr10 23800408 23800656 -116516109 + Tigger3(Golem) DNA MER2_type 2 291 -2738 1302 130 0 74 chr10 23800656 23800887 -116515878 - AluSq SINE Alu -12 301 88 334 136 0 0 chr10 23800892 23800951 -116515814 + Tigger3(Golem) DNA MER2_type 282 340 -2689 3319 241 47 14 chr10 23800956 23801810 -116514955 + L1PA12 LINE L1 11 892 -6689 670 241 40 45 chr10 23801801 23802000 -116514765 - L1PA12 LINE L1 -6774 807 610 * 861 110 45 19 chr10 23802018 23802165 -116514600 - Tigger3(Golem) DNA MER2_type -325 2704 2551 2252 123 0 0 chr10 23802165 23802474 -116514291 + AluSx SINE Alu 1 309 -3 27 0 0 0 chr10 23804056 23804083 -116512682 + AT_rich Low_complexity Low_complexity 1 27 0 1988 105 50 0 chr10 23804432 23804709 -116512056 - AluSx SINE Alu -21 291 1 25 31 0 0 chr10 23804908 23804940 -116511825 + AT_rich Low_complexity Low_complexity 1 32 0 2155 95 30 0 chr10 23805028 23805323 -116511442 - AluSq SINE Alu -9 304 1 298 267 218 0 chr10 23805683 23805784 -116510981 - L2 LINE L2 0 3272 3150 249 233 17 0 chr10 23805797 23805857 -116510908 + MLT1A1 LTR MaLR 1 61 -444 464 220 22 82 chr10 23805858 23806040 -116510725 - L2 LINE L2 -69 3244 3074 22 0 0 0 chr10 23806571 23806593 -116510172 + AT_rich Low_complexity Low_complexity 1 22 0 243 250 89 0 chr10 23807791 23807847 -116508918 + L2 LINE L2 3204 3264 -8 22 35 0 0 chr10 23809292 23809321 -116507444 + AT_rich Low_complexity Low_complexity 1 29 0 751 172 0 0 chr10 23810962 23811084 -116505681 + FLAM_A SINE Alu 1 122 -11 207 0 0 0 chr10 23811087 23811110 -116505655 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 2541 49 13 0 chr10 23811312 23811616 -116505149 + AluY SINE Alu 1 308 -3 23 54 0 0 chr10 23812097 23812134 -116504631 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 23813476 23813497 -116503268 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 23817115 23817138 -116499627 + AT_rich Low_complexity Low_complexity 1 23 0 24 100 0 0 chr10 23818990 23819070 -116497695 + AT_rich Low_complexity Low_complexity 1 80 0 1711 150 0 62 chr10 23819992 23820298 -116496467 - AluJo SINE Alu -25 287 1 248 296 0 0 chr10 23820300 23820354 -116496411 - Tigger3(Golem) DNA MER2_type -2975 54 1 2394 209 28 4 chr10 23820408 23820944 -116495821 + L1MB7 LINE L1 5627 6175 -9 1603 168 66 0 chr10 23820964 23821238 -116495527 - AluJb SINE Alu -20 292 1 515 212 49 108 chr10 23822512 23822715 -116494050 - MER112 DNA MER1_type -12 248 58 1986 122 11 0 chr10 23824975 23825261 -116491504 - AluSx SINE Alu -23 289 1 1792 152 10 21 chr10 23827041 23827331 -116489434 + AluJb SINE Alu 1 287 -25 381 179 0 0 chr10 23827267 23827334 -116489431 + AluJ/FRAM SINE Alu 224 290 -12 458 237 59 30 chr10 23827393 23827562 -116489203 + L1M4 LINE L1 5 178 -6364 330 261 152 43 chr10 23827630 23827768 -116488997 + L1M4 LINE L1 330 482 -6060 667 102 213 0 chr10 23827778 23827886 -116488879 - AluJb SINE Alu -181 131 1 625 93 187 13 chr10 23827973 23828123 -116488642 + Tigger3(Golem) DNA MER2_type 2385 2560 -469 1049 76 0 182 chr10 23828130 23828366 -116488399 + 7SK RNA RNA 1 193 0 4149 221 56 43 chr10 23828366 23828668 -116488097 + L1M4 LINE L1 541 838 -5808 6358 120 88 22 chr10 23828668 23829820 -116486945 + Tigger3b DNA MER2_type 2 1230 -1 4149 221 56 43 chr10 23829820 23831021 -116485744 + L1M4 LINE L1 838 2081 -4565 1829 139 91 15 chr10 23831021 23831360 -116485405 + MLT1A1 LTR MaLR 1 365 0 4149 221 56 43 chr10 23831360 23832004 -116484761 + L1M4 LINE L1 2081 2715 -3931 701 215 56 0 chr10 23832007 23832151 -116484614 - MER6 DNA MER2_type 0 865 -7 2684 211 47 16 chr10 23832194 23832895 -116483870 + L1M4 LINE L1 2718 3440 -3204 331 214 65 78 chr10 23833224 23833378 -116483387 + L1M4 LINE L1 3418 3569 -3075 22 0 0 0 chr10 23833446 23833468 -116483297 + AT_rich Low_complexity Low_complexity 1 22 0 1166 195 28 0 chr10 23833469 23833684 -116483081 - MER58A DNA MER1_type 0 224 4 2165 94 0 3 chr10 23833860 23834175 -116482590 - AluSc SINE Alu 0 309 1 1733 137 63 19 chr10 23834395 23834761 -116482004 + Tigger3(Golem) DNA MER2_type 1 3028 -1 180 0 0 0 chr10 23834930 23834950 -116481815 + (A)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr10 23835124 23835145 -116481620 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 23835201 23835229 -116481536 + AT_rich Low_complexity Low_complexity 1 28 0 2422 47 0 56 chr10 23835956 23836278 -116480487 + AluY SINE Alu 1 304 -7 207 0 0 0 chr10 23837809 23837832 -116478933 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 233 247 129 41 chr10 23838273 23838443 -116478322 - L1MC/D LINE L1 -1961 5847 5663 292 254 254 0 chr10 23838521 23838643 -116478122 - MER112 DNA MER1_type -96 164 12 261 200 67 83 chr10 23838707 23838827 -116477938 - L1P3 LINE L1 -512 5660 5543 2194 107 7 0 chr10 23839018 23839327 -116477438 - AluSx SINE Alu -1 311 1 195 129 0 0 chr10 23839380 23839411 -116477354 + (T)n Simple_repeat Simple_repeat 1 31 0 294 330 160 15 chr10 23839744 23839950 -116476815 - L3 LINE CR1 -92 1485 1250 1133 192 64 0 chr10 23840823 23841057 -116475708 + MER5C DNA MER1_type 1 249 -75 676 181 0 45 chr10 23842086 23842241 -116474524 + L1MA9 LINE L1 6156 6303 -9 1628 231 132 14 chr10 23843404 23843905 -116472860 - HsTC2 DNA Tc2 -22 1876 1317 2188 120 0 7 chr10 23843905 23844206 -116472559 - AluSx SINE Alu -11 301 3 280 274 0 118 chr10 23844243 23844338 -116472427 - HsTC2 DNA Tc2 -1751 147 71 2410 75 0 10 chr10 23844338 23844643 -116472122 + AluY SINE Alu 1 302 -9 280 274 0 118 chr10 23844643 23844682 -116472083 - HsTC2 DNA Tc2 -1827 71 29 394 292 139 0 chr10 23844734 23844878 -116471887 + MIR SINE MIR 75 238 -24 252 283 62 26 chr10 23845203 23845316 -116471449 + MLT1J1 LTR MaLR 59 175 -271 454 226 29 29 chr10 23845417 23845554 -116471211 + MLT1J LTR MaLR 374 510 -1 483 170 19 38 chr10 23845646 23845752 -116471013 + L1MC4a LINE L1 6731 6834 -974 * 1294 223 94 12 chr10 23845750 23846091 -116470674 + L1ME1 LINE L1 5794 6162 -4 210 143 0 0 chr10 23846117 23846152 -116470613 + (A)n Simple_repeat Simple_repeat 1 35 0 2136 122 0 6 chr10 23846161 23846473 -116470292 + AluSq SINE Alu 1 310 -3 3098 219 121 15 chr10 23846481 23847208 -116469557 + L1MC4a LINE L1 6849 7684 -124 3203 126 76 2 chr10 23847208 23847724 -116469041 - MER41C LTR ERV1 0 554 1 3098 219 121 15 chr10 23847724 23847864 -116468901 + L1MC4a LINE L1 7684 7808 0 422 249 57 57 chr10 23847881 23848126 -116468639 + L1MEd LINE L1 960 1204 -4915 232 325 93 38 chr10 23848181 23848418 -116468347 + HAL1 LINE L1 1413 1662 -845 1831 149 17 7 chr10 23848639 23848941 -116467824 + AluJb SINE Alu 3 307 -5 300 232 58 32 chr10 23849349 23849504 -116467261 + L1MEd LINE L1 2114 2272 -3857 1848 129 7 7 chr10 23849612 23849907 -116466858 - MER41-int LTR ERV1 -2456 3490 3196 1326 136 0 76 chr10 23850438 23850688 -116466077 + AluJb SINE Alu 74 304 -8 1600 259 72 2 chr10 23850848 23851353 -116465412 - L2 LINE L2 0 3313 2776 4823 155 24 17 chr10 23851397 23852232 -116464533 - L1MB4 LINE L1 -12 6168 5323 562 67 0 44 chr10 23852232 23852322 -116464443 - L1PA8 LINE L1 -6 6166 6081 4823 155 24 17 chr10 23852322 23852443 -116464322 - L1MB4 LINE L1 -857 5323 5204 1094 201 96 12 chr10 23852449 23852698 -116464067 - AluJb SINE Alu -22 290 21 250 242 50 8 chr10 23852738 23852858 -116463907 - L1M4c LINE L1 -4041 2343 2219 288 200 15 0 chr10 23852879 23852944 -116463821 + L1M4c LINE L1 2135 2200 -4184 1132 217 104 41 chr10 23852945 23853263 -116463502 - L2 LINE L2 -534 2780 2443 2059 130 16 0 chr10 23853334 23853641 -116463124 - AluSx SINE Alu 0 312 1 2054 136 0 10 chr10 23853722 23854023 -116462742 + AluSx SINE Alu 1 298 -14 658 142 0 99 chr10 23854387 23854424 -116462341 + L1MB7 LINE L1 5915 5954 -230 2208 87 7 0 chr10 23854424 23854724 -116462041 + AluY SINE Alu 1 302 -9 658 142 0 99 chr10 23854724 23854736 -116462029 + L1MB7 LINE L1 5954 5966 -218 658 196 40 0 chr10 23854736 23854884 -116461881 + L1MB7 LINE L1 6022 6175 -9 2251 82 17 0 chr10 23855960 23856252 -116460513 + AluSg SINE Alu 1 297 -13 297 0 0 0 chr10 23856295 23856328 -116460437 + (TG)n Simple_repeat Simple_repeat 2 34 0 468 214 84 65 chr10 23856359 23856513 -116460252 - L2 LINE L2 -597 2717 2561 379 202 16 0 chr10 23856516 23856640 -116460125 + (TA)n Simple_repeat Simple_repeat 1 126 0 1813 198 32 11 chr10 23856757 23857131 -116459634 + MSTD LTR MaLR 4 385 -11 689 140 118 38 chr10 23857428 23857614 -116459151 + L1MA8 LINE L1 6088 6288 -3 1126 129 60 51 chr10 23857982 23858199 -116458566 + MER20 DNA MER1_type 1 219 0 779 216 100 29 chr10 23858202 23858443 -116458322 + MIR SINE MIR 5 262 0 285 98 0 0 chr10 23859285 23859326 -116457439 + (T)n Simple_repeat Simple_repeat 1 41 0 8686 94 4 3 chr10 23959532 23960719 -116356046 + L1PA7 LINE L1 365 1552 -4594 * 40646 55 46 2 chr10 23960700 23966193 -116350572 + L1P1 LINE L1 1 5740 -415 4835 91 6 1 chr10 23966302 23966953 -116349812 + L1PA2 LINE L1 5500 6153 -2 26967 69 47 1 chr10 23966973 23971147 -116345618 + L1PA7 LINE L1 1522 5892 -262 2099 91 3 18 chr10 23971301 23971586 -116345179 + L1PA7 LINE L1 5870 6150 -4 1884 155 7 3 chr10 23971802 23972099 -116344666 + AluJb SINE Alu 1 298 -14 240 220 0 20 chr10 23972275 23972325 -116344440 + L2 LINE L2 3244 3292 -21 215 289 26 13 chr10 23973107 23973183 -116343582 - L2 LINE L2 0 3272 3196 487 329 56 9 chr10 23973201 23973417 -116343348 + MLT1J LTR MaLR 286 511 0 1675 167 0 16 chr10 23974423 23974734 -116342031 - L1P LINE L1 -5840 306 1 430 261 49 20 chr10 23974825 23975028 -116341737 - L1ME4a LINE L1 -169 5952 5744 717 180 58 58 chr10 23975233 23975422 -116341343 - MER53 DNA DNA 0 189 1 369 216 155 26 chr10 23975450 23975566 -116341199 - L1ME4a LINE L1 -603 5518 5388 965 321 70 40 chr10 23976026 23976608 -116340157 + L2 LINE L2 2267 2866 -448 1747 168 0 7 chr10 23977861 23978153 -116338612 + AluJo SINE Alu 17 306 -6 1639 148 0 72 chr10 23978417 23978722 -116338043 + AluJo SINE Alu 2 284 -28 609 264 22 48 chr10 23978863 23979094 -116337671 + AluJo SINE Alu 2 226 -86 402 94 0 0 chr10 23979661 23979714 -116337051 - Alu SINE Alu -25 287 235 226 113 16 145 chr10 23980169 23980231 -116336534 - MER20B DNA MER1_type -653 130 77 816 152 0 43 chr10 23980599 23980737 -116336028 - FLAM_C SINE Alu -1 132 1 2043 143 0 6 chr10 23981777 23982091 -116334674 - AluSx SINE Alu 0 312 1 646 175 42 0 chr10 23982155 23982275 -116334490 - L1MA5A LINE L1 -1 6296 6172 1880 148 24 7 chr10 23982275 23982565 -116334200 - AluJb SINE Alu -7 305 11 1262 113 90 143 chr10 23982568 23982869 -116333896 + LTR12 LTR ERV1 1 285 -429 342 214 11 0 chr10 23982870 23982959 -116333806 + LTR30 LTR ERV1 553 642 -80 707 155 18 22 chr10 23982959 23983099 -116333666 + LTR12 LTR ERV1 300 584 -130 * 27632 112 13 16 chr10 23983081 23987909 -116328856 + HERV9 LTR ERV1 54 4953 -3446 4964 111 48 14 chr10 23987886 23988842 -116327923 + HERV9 LTR ERV1 709 1740 -5156 * 5294 119 11 4 chr10 23988852 23989617 -116327148 + HERV9 LTR ERV1 7630 8399 0 1042 132 7 19 chr10 23989807 23989997 -116326768 + LTR12 LTR ERV1 72 1984 -454 345 142 52 164 chr10 23989968 23990102 -116326663 + LTR12 LTR ERV1 159 277 -437 * 330 263 10 0 chr10 23990102 23990201 -116326564 + LTR30 LTR ERV1 544 643 -79 745 99 0 0 chr10 23990202 23990303 -116326462 + LTR12 LTR ERV1 481 581 -133 2756 108 69 77 chr10 23990311 23990819 -116325946 - L1MA5A LINE L1 -121 6176 5673 287 330 26 36 chr10 23991194 23991388 -116325377 + L2 LINE L2 2552 2743 -571 2370 96 0 0 chr10 23991394 23991697 -116325068 + AluY SINE Alu 1 303 -8 1102 285 38 12 chr10 23991773 23992173 -116324592 - L1M4 LINE L1 -1805 4405 3996 22 35 0 0 chr10 23992202 23992231 -116324534 + AT_rich Low_complexity Low_complexity 1 29 0 1412 204 20 30 chr10 23992369 23992668 -116324097 - AluJo SINE Alu -16 296 1 3540 165 47 45 chr10 23992669 23993862 -116322903 - L1MA9 LINE L1 -346 5966 4757 * 4549 142 29 31 chr10 23993856 23993964 -116322801 - L1MA9 LINE L1 -1622 4524 4417 1620 173 48 7 chr10 23993964 23994264 -116322501 + AluJo SINE Alu 1 311 0 4549 142 29 31 chr10 23994264 23994994 -116321771 - L1MA9 LINE L1 -1729 4417 3687 2407 244 82 28 chr10 23994993 23995677 -116321088 - L1M4 LINE L1 -5420 721 1 * 198 0 0 0 chr10 23996084 23996106 -116320659 + (ATG)n Simple_repeat Simple_repeat 3 24 0 6166 119 11 5 chr10 23996941 23998167 -116318598 + L1PA16 LINE L1 4901 6149 -17 2437 101 0 0 chr10 23999099 23999407 -116317358 + AluSx SINE Alu 3 310 -2 2290 145 17 9 chr10 23999424 23999768 -116316997 - MER7A DNA MER2_type 0 346 2 294 125 0 0 chr10 24000188 24000236 -116316529 + (CAT)n Simple_repeat Simple_repeat 3 50 0 282 333 9 9 chr10 24000254 24000362 -116316403 - MIR SINE MIR -14 248 141 461 145 0 0 chr10 24000362 24000424 -116316341 - Alu SINE Alu -17 295 234 245 208 0 0 chr10 24000529 24000582 -116316183 + AluJ/monomer SINE Alu 241 293 -9 4870 137 51 20 chr10 24000582 24000765 -116316000 + L1MA8 LINE L1 5422 5598 -693 2252 55 0 98 chr10 24000765 24001093 -116315672 + AluY SINE Alu 1 296 -15 4870 137 51 20 chr10 24001093 24001749 -116315016 + L1MA8 LINE L1 5598 6287 -4 2542 176 44 0 chr10 24001903 24002311 -116314454 + MSTB LTR MaLR 1 426 0 22 35 0 0 chr10 24002363 24002392 -116314373 + AT_rich Low_complexity Low_complexity 1 29 0 297 309 21 0 chr10 24002728 24002822 -116313943 - L2 LINE L2 0 3313 3218 2094 189 48 17 chr10 24003154 24003567 -116313198 - MSTB LTR MaLR 0 426 1 249 276 133 0 chr10 24004000 24004098 -116312667 - MIR SINE MIR -56 206 96 2229 181 67 31 chr10 24004372 24004892 -116311873 + LTR55 LTR ERV 1 539 -9 1098 167 0 0 chr10 24004971 24005133 -116311632 - FRAM SINE Alu -4 162 1 192 324 108 22 chr10 24005809 24005948 -116310817 + L2 LINE L2 3121 3271 -1 419 278 226 39 chr10 24006123 24006429 -116310336 - L2 LINE L2 -994 2320 1958 2054 121 197 0 chr10 24006659 24007015 -116309750 - MSTA LTR MaLR -2 426 1 323 260 239 28 chr10 24007015 24007300 -116309465 - L2 LINE L2 -1389 1925 1581 209 33 33 0 chr10 24007409 24007439 -116309326 + (TTA)n Simple_repeat Simple_repeat 3 33 0 411 288 159 41 chr10 24007487 24007827 -116308938 - HAL1 LINE L1 -813 1694 1315 2287 101 7 0 chr10 24008005 24008303 -116308462 + AluSx SINE Alu 3 302 -10 27 0 0 0 chr10 24011078 24011105 -116305660 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr10 24011188 24011216 -116305549 + AT_rich Low_complexity Low_complexity 1 28 0 1954 140 17 0 chr10 24011316 24011609 -116305156 - AluSq SINE Alu -15 298 1 570 244 141 40 chr10 24011618 24011908 -116304857 - L1ME3 LINE L1 -2 6160 5841 37930 90 7 13 chr10 24011908 24018118 -116298647 + L1PA6 LINE L1 11 6181 0 731 197 122 0 chr10 24018132 24018320 -116298445 - L1ME3 LINE L1 -324 5838 5628 1673 280 79 34 chr10 24018326 24019208 -116297557 - L1ME3 LINE L1 -1032 5114 4193 1058 252 47 38 chr10 24019208 24019526 -116297239 - LTR40b LTR ERVL 0 462 142 1810 166 3 16 chr10 24020110 24020417 -116296348 - AluJo SINE Alu -9 303 1 1709 184 20 0 chr10 24021957 24022256 -116294509 - AluJo SINE Alu -7 305 1 4221 193 79 28 chr10 24023004 24023729 -116293036 + L1MCb LINE L1 4 690 -5874 2397 96 0 0 chr10 24023729 24024032 -116292733 + AluSc SINE Alu 1 303 -6 4221 193 79 28 chr10 24024032 24024584 -116292181 + L1MCb LINE L1 690 1212 -5352 2805 99 6 3 chr10 24024584 24024947 -116291818 - THE1B LTR MaLR 0 364 1 4221 193 79 28 chr10 24024947 24025394 -116291371 + L1MCb LINE L1 1212 1802 -4762 2414 162 23 39 chr10 24025869 24026122 -116290643 - MSTB LTR MaLR 0 426 180 2107 119 0 7 chr10 24026122 24026428 -116290337 + AluSx SINE Alu 2 305 0 2414 162 23 39 chr10 24026428 24026606 -116290159 - MSTB LTR MaLR -246 180 1 204 40 0 0 chr10 24027027 24027052 -116289713 + (CAA)n Simple_repeat Simple_repeat 3 27 0 2116 136 3 7 chr10 24028036 24028346 -116288419 + AluJo SINE Alu 1 309 -3 515 174 9 43 chr10 24028457 24028572 -116288193 - MER74B LTR ERVL -511 111 1 464 297 115 70 chr10 24028849 24029206 -116287559 - L2 LINE L2 -10 3262 2890 214 150 25 0 chr10 24029982 24030022 -116286743 - L2 LINE L2 -5 3308 3268 195 317 37 49 chr10 24030178 24030342 -116286423 - L2 LINE L2 -410 2904 2743 1557 180 3 27 chr10 24030356 24030650 -116286115 - AluJo SINE Alu -25 287 1 23 0 0 0 chr10 24030675 24030698 -116286067 + AT_rich Low_complexity Low_complexity 1 23 0 19745 84 9 1 chr10 24030698 24034347 -116282418 - L1PA7 LINE L1 -8 6146 2473 728 226 132 23 chr10 24034808 24035065 -116281700 + MER87 LTR ERV1 257 541 0 1394 228 58 17 chr10 24035072 24035485 -116281280 + MER74B LTR ERVL 183 612 -10 222 246 0 15 chr10 24036412 24036477 -116280288 + (TATAA)n Simple_repeat Simple_repeat 2 65 0 25 51 0 0 chr10 24036541 24036580 -116280185 + AT_rich Low_complexity Low_complexity 1 39 0 802 294 63 44 chr10 24037084 24037451 -116279314 - L2 LINE L2 -8 3305 2932 4012 232 50 23 chr10 24037519 24037852 -116278913 + L1 LINE L1 2639 2962 -3184 2260 104 0 0 chr10 24037852 24038150 -116278615 + AluY SINE Alu 1 298 -13 4012 232 50 23 chr10 24038150 24038285 -116278480 + L1 LINE L1 2962 3092 -3054 2212 126 10 0 chr10 24038285 24038595 -116278170 + AluSq SINE Alu 1 313 0 4012 232 50 23 chr10 24038595 24039458 -116277307 + L1 LINE L1 3092 4007 -2139 1062 227 60 25 chr10 24039457 24039810 -116276955 - L1M4 LINE L1 -3114 3032 2668 * 340 315 56 5 chr10 24039850 24040066 -116276699 - L1M4 LINE L1 -2205 3941 3715 1850 165 7 4 chr10 24040572 24040851 -116275914 - AluJo SINE Alu -27 285 6 563 238 46 65 chr10 24041005 24041424 -116275341 + L1MC5 LINE L1 6499 6900 -908 10992 121 24 53 chr10 24041428 24044079 -116272686 + L1P3 LINE L1 5 2672 -3789 324 279 93 19 chr10 24044181 24044342 -116272423 - L1M4 LINE L1 -2460 3686 3514 761 246 126 85 chr10 24044779 24044882 -116271883 - HAL1b LINE L1 -438 910 813 2427 111 0 0 chr10 24044882 24045234 -116271531 - L1PA13 LINE L1 -1 6162 5811 761 246 126 85 chr10 24045234 24045622 -116271143 - HAL1b LINE L1 -535 813 371 1770 188 0 0 chr10 24045622 24045910 -116270855 + AluJb SINE Alu 1 288 -24 761 246 126 85 chr10 24045910 24046219 -116270546 - HAL1b LINE L1 -977 371 76 1079 280 52 3 chr10 24046386 24046693 -116270072 - LTR16C LTR ERVL -23 468 147 2269 88 7 0 chr10 24046787 24047084 -116269681 + AluSc SINE Alu 1 299 -10 917 211 57 0 chr10 24047213 24047497 -116269268 + MER33 DNA MER1_type 1 292 -32 717 273 45 15 chr10 24047738 24048181 -116268584 + L1ME1 LINE L1 1055 1489 -4895 685 169 101 20 chr10 24048183 24048331 -116268434 - MER6B DNA MER2_type -5 205 46 966 228 54 93 chr10 24048334 24048873 -116267892 + L1ME1 LINE L1 1897 2414 -4149 985 160 4 22 chr10 24048888 24049117 -116267648 - MER1B DNA MER1_type -61 278 1 1337 257 51 34 chr10 24049120 24049770 -116266995 + L1ME1 LINE L1 2398 3058 -3324 * 1542 201 19 50 chr10 24049763 24050185 -116266580 + L1MB8 LINE L1 5769 6177 -1 * 6098 223 77 41 chr10 24050177 24050792 -116265973 + L1ME1 LINE L1 3047 3639 -2763 2549 74 3 0 chr10 24050792 24051101 -116265664 + AluY SINE Alu 1 310 -1 6098 223 77 41 chr10 24051101 24052394 -116264371 + L1ME1 LINE L1 3639 4884 -1518 2339 129 73 22 chr10 24052394 24052805 -116263960 + MSTB1 LTR MaLR 1 432 0 6098 223 77 41 chr10 24052805 24054133 -116262632 + L1ME1 LINE L1 4884 6397 -5 201 272 12 99 chr10 24054896 24054977 -116261788 - L2 LINE L2 -11 3302 3229 * 559 373 150 4 chr10 24054942 24055494 -116261271 + L2 LINE L2 265 897 -2417 245 222 16 16 chr10 24055513 24055576 -116261189 + CT-rich Low_complexity Low_complexity 2 64 0 579 346 82 16 chr10 24055881 24056316 -116260449 + L2 LINE L2 2537 3006 -266 1673 141 86 7 chr10 24056378 24056647 -116260118 - AluJo SINE Alu -22 290 1 1944 139 3 7 chr10 24057242 24057537 -116259228 - AluJo SINE Alu -18 294 1 366 307 23 47 chr10 24058105 24058320 -116258445 + MER63A DNA MER1_type 1 210 0 2030 173 45 47 chr10 24059519 24059534 -116257231 + MER74A LTR ERVL 1 15 -543 1633 194 7 0 chr10 24059534 24059823 -116256942 - AluJb SINE Alu -19 293 3 2030 173 45 47 chr10 24059823 24060293 -116256472 + MER74A LTR ERVL 15 485 -73 221 227 0 0 chr10 24060366 24060410 -116256355 + L2 LINE L2 3268 3311 -2 2108 120 30 0 chr10 24060759 24061059 -116255706 + AluSx SINE Alu 1 309 -3 2284 59 40 16 chr10 24061458 24061761 -116255004 + AluY SINE Alu 1 310 -1 190 273 23 0 chr10 24061947 24061991 -116254774 - MIR SINE MIR -131 77 33 655 198 43 0 chr10 24062677 24062793 -116253972 + FLAM_A SINE Alu 1 121 -12 29 47 0 0 chr10 24062793 24062836 -116253929 + AT_rich Low_complexity Low_complexity 1 43 0 563 83 28 9 chr10 24063841 24063950 -116252815 + (CA)n Simple_repeat Simple_repeat 1 111 0 39 50 0 0 chr10 24064350 24064410 -116252355 + AT_rich Low_complexity Low_complexity 1 60 0 1694 174 39 7 chr10 24064429 24064711 -116252054 + AluJb SINE Alu 1 291 -21 3562 196 1 1 chr10 24064730 24065499 -116251266 - L1PB1 LINE L1 -2026 4120 3352 3084 213 13 0 chr10 24065495 24066205 -116250560 + L1PB1 LINE L1 4116 4834 -1312 * 6158 79 4 42 chr10 24066441 24067319 -116249446 + L1PB1 LINE L1 4910 5740 -411 261 0 0 0 chr10 24067319 24067348 -116249417 + (TG)n Simple_repeat Simple_repeat 2 30 0 6158 79 4 42 chr10 24067348 24067741 -116249024 + L1PB1 LINE L1 5740 6146 -5 2454 73 0 0 chr10 24067810 24068112 -116248653 + AluY SINE Alu 1 302 -9 1759 172 0 21 chr10 24068460 24068745 -116248020 - AluJo SINE Alu -33 279 1 431 196 18 62 chr10 24068745 24068857 -116247908 - MIR SINE MIR -47 215 109 21 0 0 0 chr10 24069922 24069943 -116246822 + AT_rich Low_complexity Low_complexity 1 21 0 378 128 13 39 chr10 24070483 24070561 -116246204 - L1PA16 LINE L1 0 6166 6091 428 294 12 12 chr10 24070956 24071116 -116245649 - LTR16A LTR ERVL -89 361 202 316 269 39 0 chr10 24071168 24071272 -116245493 - LTR16A LTR ERVL -340 110 3 21 0 0 0 chr10 24071513 24071534 -116245231 + AT_rich Low_complexity Low_complexity 1 21 0 2775 143 31 44 chr10 24072014 24072650 -116244115 + L1M3 LINE L1 4803 5440 -728 1979 111 7 0 chr10 24072650 24072920 -116243845 + AluSx SINE Alu 1 272 -40 1669 224 28 71 chr10 24073549 24074115 -116242650 - MER34 LTR ERV1 0 542 1 26 64 0 0 chr10 24074212 24074259 -116242506 + AT_rich Low_complexity Low_complexity 1 47 0 1369 182 0 45 chr10 24074505 24074774 -116241991 - AluJo SINE Alu -19 293 37 519 175 77 108 chr10 24076484 24076565 -116240200 + MER5A DNA MER1_type 2 84 -105 1937 130 65 3 chr10 24076565 24076858 -116239907 + AluJb SINE Alu 1 311 -1 519 175 77 108 chr10 24076858 24076970 -116239795 + MER5A DNA MER1_type 84 189 0 30 0 0 0 chr10 24077400 24077430 -116239335 + AT_rich Low_complexity Low_complexity 1 30 0 27 49 0 0 chr10 24077470 24077511 -116239254 + AT_rich Low_complexity Low_complexity 1 41 0 811 155 0 0 chr10 24077720 24077836 -116238929 - FLAM_A SINE Alu -16 117 2 9201 154 131 54 chr10 24078351 24078682 -116238083 - L1MCa LINE L1 -3375 3051 2747 2172 112 7 0 chr10 24078682 24078977 -116237788 + AluSq SINE Alu 1 297 -16 9201 154 131 54 chr10 24078977 24079320 -116237445 - L1MCa LINE L1 -3679 2747 2432 1483 142 146 8 chr10 24079320 24079574 -116237191 - AluJb SINE Alu -11 301 13 9201 154 131 54 chr10 24079574 24079839 -116236926 - L1MCa LINE L1 -3994 2432 2189 2454 65 0 10 chr10 24079839 24080148 -116236617 + AluY SINE Alu 1 306 -5 9201 154 131 54 chr10 24080148 24080167 -116236598 - L1MCa LINE L1 -4237 2189 2173 2143 144 21 0 chr10 24080167 24080506 -116236259 - MER7A DNA MER2_type -1 345 2 9201 154 131 54 chr10 24080506 24080675 -116236090 - L1MCa LINE L1 -4253 2173 2018 1500 160 9 0 chr10 24080675 24080906 -116235859 - AluJb SINE Alu -7 305 73 9201 154 131 54 chr10 24080906 24082599 -116234166 - L1MCa LINE L1 -4408 2018 19 343 301 71 0 chr10 24082688 24082801 -116233964 + MIR SINE MIR 123 243 -19 21 0 0 0 chr10 24083046 24083067 -116233698 + AT_rich Low_complexity Low_complexity 1 21 0 2439 84 3 0 chr10 24084938 24085247 -116231518 + AluSx SINE Alu 1 310 -2 252 100 0 0 chr10 24085503 24085543 -116231222 + (TTCC)n Simple_repeat Simple_repeat 4 43 0 1736 161 25 11 chr10 24085567 24085853 -116230912 - AluJo SINE Alu -22 290 1 229 269 137 6 chr10 24085892 24086067 -116230698 - HAL1 LINE L1 -220 2287 2090 771 264 109 48 chr10 24086127 24086567 -116230198 - HAL1 LINE L1 -2040 467 1 317 190 21 120 chr10 24088722 24088864 -116227901 + MIR SINE MIR 81 208 -54 246 253 13 13 chr10 24089851 24089926 -116226839 - MER20B DNA MER1_type 0 783 709 883 229 78 72 chr10 24090022 24090380 -116226385 - MLT1G1 LTR MaLR -173 393 43 922 133 265 9 chr10 24090393 24090604 -116226161 + AluSg SINE Alu 1 265 -45 262 226 19 0 chr10 24090614 24090667 -116226098 - MLT1G1 LTR MaLR -541 54 1 599 251 59 0 chr10 24090667 24090854 -116225911 - MER20B DNA MER1_type -69 714 517 26 30 0 0 chr10 24092556 24092589 -116224176 + AT_rich Low_complexity Low_complexity 1 33 0 448 228 22 60 chr10 24092756 24092940 -116223825 - MER96B DNA MER1_type? 0 417 241 1525 144 6 113 chr10 24093999 24094326 -116222439 - AluJb SINE Alu -10 292 1 1678 169 3 60 chr10 24095165 24095484 -116221281 + AluJo SINE Alu 1 301 -11 713 206 0 7 chr10 24095964 24096105 -116220660 + MER69A DNA AcHobo 36 175 -2 647 299 68 77 chr10 24096167 24096736 -116220029 + L1MB8 LINE L1 4489 5052 -1094 1077 171 0 11 chr10 24096785 24096966 -116219799 - AluJb SINE Alu 0 312 134 2734 191 7 17 chr10 24097220 24097811 -116218954 + L1MB8 LINE L1 5574 6158 -20 725 310 59 26 chr10 24097919 24098458 -116218307 + L1ME4a LINE L1 5355 5911 -210 234 0 0 0 chr10 24098763 24098789 -116217976 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 192 125 0 0 chr10 24099601 24099633 -116217132 + (TATATG)n Simple_repeat Simple_repeat 3 34 0 1494 113 0 0 chr10 24099633 24099828 -116216937 - AluSg/x SINE Alu -18 292 98 1794 118 63 41 chr10 24100334 24100697 -116216068 - THE1C LTR MaLR 0 375 5 205 306 0 0 chr10 24100788 24100873 -116215892 + A-rich Low_complexity Low_complexity 1 85 0 833 295 55 37 chr10 24100941 24101321 -116215444 + LTR16A LTR ERVL 64 450 0 953 300 43 12 chr10 24101380 24101797 -116214968 + HERV16 LTR ERVL 59 488 -4508 1071 274 59 13 chr10 24102146 24102617 -116214148 + HERV16 LTR ERVL 933 1425 -3571 1309 189 51 31 chr10 24102776 24103030 -116213735 + AluJo SINE Alu 1 259 -53 198 0 0 0 chr10 24103031 24103053 -116213712 + (GAAAA)n Simple_repeat Simple_repeat 3 24 0 1361 181 4 0 chr10 24103400 24103632 -116213133 + AluJo SINE Alu 68 300 -12 327 210 0 25 chr10 24103646 24103727 -116213038 + MLT1H1 LTR MaLR 469 547 -8 1541 144 100 10 chr10 24104166 24104465 -116212300 - L1MC3 LINE L1 -354 7431 7106 814 112 30 37 chr10 24104500 24104634 -116212131 - FLAM_C SINE Alu 0 133 1 259 222 12 25 chr10 24104655 24104736 -116212029 - L1M4 LINE L1 -1305 4841 4762 4464 175 22 38 chr10 24104777 24106172 -116210593 - L1MB3 LINE L1 -2 6181 4810 869 196 6 0 chr10 24106186 24106359 -116210406 + MLT2B1 LTR ERVL 1 174 -346 519 227 162 7 chr10 24106362 24106516 -116210249 + MLT2B1 LTR ERVL 343 520 0 282 266 62 79 chr10 24106673 24107026 -116209739 - L1ME4a LINE L1 -125 5996 5650 1216 209 12 91 chr10 24107658 24108064 -116208701 + MLT1A2 LTR MaLR 1 374 0 186 43 0 0 chr10 24108574 24108597 -116208168 + (A)n Simple_repeat Simple_repeat 1 23 0 245 268 203 8 chr10 24108649 24108772 -116207993 + L1ME3A LINE L1 5999 6145 -25 428 129 0 0 chr10 24109848 24109910 -116206855 - AluJo SINE Alu -16 296 235 825 167 7 0 chr10 24109910 24110048 -116206717 - AluJo SINE Alu -163 149 11 372 278 112 16 chr10 24110779 24110966 -116205799 + MIR SINE MIR 20 224 -38 673 0 0 0 chr10 24112009 24112084 -116204681 - tRNA-Asn-AAC tRNA tRNA -2 75 1 21 0 0 0 chr10 24114550 24114571 -116202194 + AT_rich Low_complexity Low_complexity 1 21 0 2235 100 7 3 chr10 24114571 24114871 -116201894 + AluSq SINE Alu 1 301 -12 1902 160 0 25 chr10 24115195 24115514 -116201251 + AluJo SINE Alu 1 311 -1 21 57 0 0 chr10 24115531 24115566 -116201199 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr10 24115693 24115716 -116201049 + AT_rich Low_complexity Low_complexity 1 23 0 1598 189 35 0 chr10 24116573 24116693 -116200072 + AluJo SINE Alu 1 115 -197 207 0 0 0 chr10 24116693 24116716 -116200049 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1598 189 35 0 chr10 24116716 24116880 -116199885 + AluJo SINE Alu 115 295 -17 1457 151 0 9 chr10 24117091 24117323 -116199442 + AluSg/x SINE Alu 79 308 -2 246 305 128 21 chr10 24118020 24118161 -116198604 - MIR SINE MIR -1 261 106 2459 93 0 0 chr10 24118599 24118911 -116197854 + AluSx SINE Alu 1 312 0 897 220 83 17 chr10 24119179 24119420 -116197345 - MIR SINE MIR -5 257 1 332 194 202 8 chr10 24119523 24119647 -116197118 - L1MC4 LINE L1 -5 8037 7890 5060 163 18 98 chr10 24119654 24119867 -116196898 - L1 LINE L1 -2362 3784 3555 2300 97 13 3 chr10 24119867 24120175 -116196590 - AluSq SINE Alu -1 312 2 5060 163 18 98 chr10 24120175 24121393 -116195372 - L1 LINE L1 -2591 3555 2469 1308 167 67 107 chr10 24121392 24121511 -116195254 - L1MC4 LINE L1 -143 7899 7777 * 1734 142 68 25 chr10 24121511 24121792 -116194973 - AluSx SINE Alu -19 293 1 1308 167 67 107 chr10 24121792 24122121 -116194644 - L1MC4 LINE L1 -265 7777 7469 31 0 0 0 chr10 24122325 24122356 -116194409 + AT_rich Low_complexity Low_complexity 1 31 0 23 54 0 0 chr10 24123205 24123242 -116193523 + AT_rich Low_complexity Low_complexity 1 37 0 3362 186 64 28 chr10 24123616 24124964 -116191801 + L1MB7 LINE L1 4769 6167 -17 1796 166 0 46 chr10 24125171 24125315 -116191450 + AluJo SINE Alu 1 150 -162 1830 174 0 7 chr10 24125315 24125614 -116191151 + AluJb SINE Alu 1 297 -15 1796 166 0 46 chr10 24125614 24125794 -116190971 + AluJo SINE Alu 150 310 -2 210 256 23 0 chr10 24125924 24125967 -116190798 - L2 LINE L2 -10 3262 3219 209 270 79 22 chr10 24126344 24126433 -116190332 + L2 LINE L2 1891 1984 -1330 881 122 24 0 chr10 24126904 24127027 -116189738 + AluJo SINE Alu 11 136 -176 354 325 193 25 chr10 24127057 24127571 -116189194 + L2 LINE L2 2154 2753 -561 408 280 56 32 chr10 24127574 24127699 -116189066 + MER119 DNA MER1_type 1 128 -455 504 240 16 0 chr10 24127712 24127833 -116188932 + MER119 DNA MER1_type 461 583 0 1662 160 68 4 chr10 24128484 24128765 -116188000 + AluJo SINE Alu 1 299 -13 2214 92 7 7 chr10 24128781 24129076 -116187689 - AluSq SINE Alu -18 295 1 295 369 49 16 chr10 24129133 24129255 -116187510 + L2 LINE L2 3138 3263 -9 1372 78 6 11 chr10 24129559 24129739 -116187026 - AluSq SINE Alu -134 179 1 360 344 46 15 chr10 24129796 24129927 -116186838 + L2 LINE L2 3138 3272 0 275 286 0 33 chr10 24130066 24130157 -116186608 + MLT1L LTR MaLR 1 88 -527 236 320 80 29 chr10 24130208 24130383 -116186382 + MLT1L LTR MaLR 206 389 -226 2161 104 10 3 chr10 24131680 24131978 -116184787 + AluSq SINE Alu 1 300 -13 654 287 82 38 chr10 24132186 24132321 -116184444 - L1M4 LINE L1 -861 5285 5157 1562 164 122 3 chr10 24132321 24132632 -116184133 - MER7A DNA MER2_type 0 346 1 654 287 82 38 chr10 24132632 24132724 -116184041 - L1M4 LINE L1 -989 5157 5071 2209 98 0 29 chr10 24132724 24133030 -116183735 - AluSc SINE Alu -12 297 1 654 287 82 38 chr10 24133030 24133142 -116183623 - L1M4 LINE L1 -1075 5071 4930 207 0 0 0 chr10 24133991 24134014 -116182751 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 456 67 0 0 chr10 24134215 24134275 -116182490 + (TTTA)n Simple_repeat Simple_repeat 1 60 0 1143 108 37 70 chr10 24138596 24138810 -116177955 - AluSq SINE Alu -104 209 3 194 400 0 0 chr10 24138914 24138999 -116177766 - MIR SINE MIR -130 132 48 2191 104 0 42 chr10 24139027 24139334 -116177431 - AluSg SINE Alu -14 296 3 1871 114 0 29 chr10 24139593 24139874 -116176891 - AluSg SINE Alu -9 301 29 2354 79 0 3 chr10 24140583 24140886 -116175879 + AluY SINE Alu 1 302 -9 1380 115 103 33 chr10 24140887 24141130 -116175635 - MER51B LTR ERV1 -117 260 1 2282 263 83 34 chr10 24142021 24143167 -116173598 + L2 LINE L2 2111 3313 0 965 191 5 16 chr10 24143270 24143459 -116173306 - AluJo SINE Alu -7 305 119 219 293 17 0 chr10 24143460 24143518 -116173247 + L2 LINE L2 3247 3305 -8 628 212 80 80 chr10 24143526 24143752 -116173013 + MIR SINE MIR 11 236 -26 2386 97 7 0 chr10 24143977 24144286 -116172479 + AluSx SINE Alu 1 311 -1 1988 107 0 21 chr10 24144325 24144606 -116172159 + L1PA15 LINE L1 5888 6162 -3 1819 129 0 74 chr10 24147330 24147655 -116169110 - AluJo SINE Alu -10 302 2 570 311 138 73 chr10 24148529 24149158 -116167607 + L2 LINE L2 1893 2569 -745 2069 141 3 0 chr10 24149158 24149457 -116167308 - AluJo SINE Alu -12 300 1 570 311 138 73 chr10 24149457 24149495 -116167270 + L2 LINE L2 2569 2603 -711 827 230 49 49 chr10 24149568 24149833 -116166932 - L1ME3A LINE L1 0 6170 5906 391 282 53 121 chr10 24149836 24150032 -116166733 + L2 LINE L2 2708 2872 -441 1951 108 22 7 chr10 24150032 24150309 -116166456 - AluSx SINE Alu -13 299 19 391 282 53 121 chr10 24150309 24150518 -116166247 + L2 LINE L2 2872 3093 -220 1753 150 0 36 chr10 24150683 24150990 -116165775 + AluSx SINE Alu 1 296 -16 1636 186 4 0 chr10 24151192 24151471 -116165294 + AluJb SINE Alu 1 280 -32 713 69 0 10 chr10 24151471 24151572 -116165193 + (GGAA)n Simple_repeat Simple_repeat 2 101 0 1271 212 4 4 chr10 24152093 24152352 -116164413 - AluJo SINE Alu -53 259 1 322 54 54 0 chr10 24152765 24152821 -116163944 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 1456 172 13 50 chr10 24152823 24153125 -116163640 + AluJo SINE Alu 1 291 -21 464 291 9 62 chr10 24153540 24153750 -116163015 + L2 LINE L2 2393 2591 -723 707 276 121 46 chr10 24153773 24154186 -116162579 - MLT1L LTR MaLR -8 607 164 2596 112 5 32 chr10 24154194 24154568 -116162197 + THE1B LTR MaLR 1 364 0 275 139 0 0 chr10 24154636 24154679 -116162086 + LTR67 LTR ERVL 97 139 -418 1792 142 3 70 chr10 24155730 24155872 -116160893 + AluJb SINE Alu 1 151 -161 1577 94 0 10 chr10 24155872 24156075 -116160690 + AluSg/x SINE Alu 96 296 -14 2223 111 0 0 chr10 24156076 24156364 -116160401 + AluSx SINE Alu 3 290 -22 225 0 0 0 chr10 24156371 24156396 -116160369 + (CA)n Simple_repeat Simple_repeat 2 26 0 1792 142 3 70 chr10 24156396 24156559 -116160206 + AluJb SINE Alu 157 295 -17 375 284 53 64 chr10 24157321 24157585 -116159180 + MARNA DNA Mariner 214 474 -112 1879 100 35 52 chr10 24157653 24157943 -116158822 + AluSg SINE Alu 1 285 -25 630 326 98 29 chr10 24157953 24158428 -116158337 + L2 LINE L2 2766 3271 -1 2275 114 0 0 chr10 24158754 24159053 -116157712 + AluSx SINE Alu 1 299 -13 428 312 144 0 chr10 24159176 24159378 -116157387 - MIR SINE MIR -1 261 31 1994 123 0 42 chr10 24159440 24159748 -116157017 + AluJo SINE Alu 6 300 -12 959 227 82 118 chr10 24159890 24160469 -116156296 - MLT1F1 LTR MaLR 0 567 1 891 165 0 25 chr10 24160476 24160634 -116156131 - FRAM SINE Alu -22 154 1 1857 117 75 0 chr10 24160751 24161032 -116155733 + AluSx SINE Alu 1 302 -10 282 29 0 0 chr10 24161196 24161231 -116155534 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 776 178 8 0 chr10 24161232 24161350 -116155415 - FLAM_C SINE Alu -23 120 2 1919 105 4 0 chr10 24161980 24162237 -116154528 - AluSc SINE Alu -51 258 1 22 0 0 0 chr10 24162567 24162589 -116154176 + AT_rich Low_complexity Low_complexity 1 22 0 1480 123 33 0 chr10 24162847 24163059 -116153706 - AluSg/x SINE Alu -8 302 84 1719 143 7 38 chr10 24163154 24163468 -116153297 + AluJb SINE Alu 1 305 0 2073 133 3 0 chr10 24163936 24164245 -116152520 + AluSx SINE Alu 1 310 -2 198 318 16 16 chr10 24164407 24164470 -116152295 - L2 LINE L2 0 3272 3210 2182 113 0 0 chr10 24165179 24165488 -116151277 + AluSx SINE Alu 1 309 0 245 174 0 0 chr10 24165493 24165539 -116151226 - L1 LINE L1 -1826 4320 4275 3154 212 17 11 chr10 24165606 24166313 -116150452 - L1 LINE L1 -1888 4258 3548 470 158 50 0 chr10 24166315 24166416 -116150349 - L1ME LINE L1 -725 5439 5334 1604 136 13 0 chr10 24166416 24166652 -116150113 + AluSx SINE Alu 1 239 -73 25 0 0 0 chr10 24166758 24166783 -116149982 + GC_rich Low_complexity Low_complexity 1 25 0 2152 105 3 3 chr10 24170376 24170670 -116146095 - AluSg SINE Alu -16 294 1 1196 250 58 96 chr10 24170670 24171082 -116145683 - L1ME LINE L1 -921 5225 4799 2410 76 0 0 chr10 24171082 24171384 -116145381 - AluY SINE Alu -9 302 1 1196 250 58 96 chr10 24171384 24171458 -116145307 - L1ME LINE L1 -1347 4799 4724 1898 107 0 46 chr10 24171458 24171738 -116145027 - AluSg1 SINE Alu -11 298 32 1196 250 58 96 chr10 24171738 24171917 -116144848 - L1ME LINE L1 -1422 4724 4584 351 0 0 0 chr10 24171941 24171980 -116144785 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 230 281 53 79 chr10 24172017 24172131 -116144634 - L2 LINE L2 -4 3268 3158 720 248 74 48 chr10 24172344 24172574 -116144191 - MIR SINE MIR -15 247 12 231 88 0 0 chr10 24172779 24172813 -116143952 + (TGG)n Simple_repeat Simple_repeat 2 35 0 336 248 77 33 chr10 24172891 24173014 -116143751 + ERVL LTR ERVL 1823 1998 -3039 759 288 24 71 chr10 24173066 24173261 -116143504 + L2 LINE L2 2992 3166 -147 2057 141 28 0 chr10 24173261 24173552 -116143213 - AluSx SINE Alu -13 299 1 759 288 24 71 chr10 24173552 24173693 -116143072 + L2 LINE L2 3166 3312 -1 1548 160 30 15 chr10 24173754 24174017 -116142748 - AluJo SINE Alu -41 271 5 329 263 121 68 chr10 24174070 24174370 -116142395 + ERVL LTR ERVL 2128 2439 -3046 1223 315 67 20 chr10 24174538 24174876 -116141889 + ERVL LTR ERVL 4757 5133 -631 1891 171 0 7 chr10 24174876 24175175 -116141590 - AluSx SINE Alu -14 298 2 1223 315 67 20 chr10 24175175 24175389 -116141376 + ERVL LTR ERVL 5133 5335 -429 523 160 90 10 chr10 24175433 24175533 -116141232 + FLAM_C SINE Alu 2 109 -34 216 0 0 0 chr10 24175538 24175562 -116141203 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 210 300 29 0 chr10 24175895 24175965 -116140800 + CT-rich Low_complexity Low_complexity 3 74 0 1968 183 93 56 chr10 24176455 24176860 -116139905 - MER63 DNA MER1_type 0 1060 631 2015 118 14 0 chr10 24176860 24177140 -116139625 + AluSx SINE Alu 1 284 -28 1968 183 93 56 chr10 24177140 24177238 -116139527 - MER63 DNA MER1_type -429 631 538 305 206 103 10 chr10 24177279 24177376 -116139389 + LTR67 LTR ERVL 452 557 0 1874 146 0 30 chr10 24177689 24177990 -116138775 - AluJo SINE Alu -20 292 1 243 237 0 51 chr10 24177990 24178049 -116138716 - L2 LINE L2 -12 3301 3246 21 0 0 0 chr10 24178268 24178289 -116138476 + AT_rich Low_complexity Low_complexity 1 21 0 609 211 0 17 chr10 24178289 24178655 -116138110 + (CATATA)n Simple_repeat Simple_repeat 1 359 0 304 303 11 0 chr10 24178696 24178785 -116137980 - L1MC4 LINE L1 -1339 6703 6614 * 342 264 11 0 chr10 24178715 24178802 -116137963 + L1MC4 LINE L1 6615 6702 -1340 1543 151 47 18 chr10 24178802 24179081 -116137684 - AluJo SINE Alu -25 287 1 347 247 44 70 chr10 24179138 24179195 -116137570 + MIR SINE MIR 31 88 -174 685 252 129 93 chr10 24179195 24179799 -116136966 - MLT2E LTR ERVL -2 626 1 347 247 44 70 chr10 24179799 24179899 -116136866 + MIR SINE MIR 88 184 -78 1682 200 0 3 chr10 24180058 24180348 -116136417 + AluJo SINE Alu 1 289 -23 671 222 32 11 chr10 24180680 24180865 -116135900 + MER53 DNA DNA 1 189 0 301 196 0 0 chr10 24181372 24181428 -116135337 + L1M4 LINE L1 5157 5212 -934 1115 221 82 7 chr10 24181432 24181735 -116135030 + L1ME1 LINE L1 3434 3759 -2387 865 124 0 8 chr10 24181735 24181856 -116134909 + AluJb SINE Alu 1 120 -192 5993 203 44 24 chr10 24181894 24182768 -116133997 + L1ME1 LINE L1 3760 4615 -1551 1618 141 96 4 chr10 24182768 24183038 -116133727 + AluSx SINE Alu 1 295 -17 5993 203 44 24 chr10 24183038 24184236 -116132529 + L1ME1 LINE L1 4615 5884 -282 2243 95 3 0 chr10 24184236 24184520 -116132245 + AluSp SINE Alu 1 309 0 217 0 0 0 chr10 24184520 24184544 -116132221 + (CAAAA)n Simple_repeat Simple_repeat 2 65 0 5993 203 44 24 chr10 24184544 24184800 -116131965 + L1ME1 LINE L1 5884 6133 -33 377 296 23 30 chr10 24185517 24185671 -116131094 - MIR SINE MIR -65 143 36 238 204 20 0 chr10 24185686 24185735 -116131030 - L2 LINE L2 -1 3312 3263 213 121 0 0 chr10 24187421 24187454 -116129311 + (A)n Simple_repeat Simple_repeat 1 33 0 2243 90 7 0 chr10 24188063 24188352 -116128413 - AluSc SINE Alu -18 291 1 205 225 0 28 chr10 24189124 24189195 -116127570 + CT-rich Low_complexity Low_complexity 3 71 0 1730 145 27 0 chr10 24190211 24190473 -116126292 + AluSx SINE Alu 44 312 0 23 33 0 0 chr10 24190566 24190596 -116126169 + AT_rich Low_complexity Low_complexity 1 30 0 927 82 0 8 chr10 24190659 24190781 -116125984 + AluSq/x SINE Alu 1 121 -191 218 31 0 31 chr10 24190781 24190813 -116125952 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 25 31 0 0 chr10 24192687 24192719 -116124046 + AT_rich Low_complexity Low_complexity 1 32 0 23 33 0 0 chr10 24195423 24195453 -116121312 + AT_rich Low_complexity Low_complexity 1 30 0 200 86 29 0 chr10 24196033 24196068 -116120697 + (TTTC)n Simple_repeat Simple_repeat 1 36 0 476 302 79 69 chr10 24197928 24198557 -116118208 - L2 LINE L2 0 3313 2597 2095 86 61 0 chr10 24199035 24199315 -116117450 + AluSx SINE Alu 1 297 -15 428 271 0 0 chr10 24199538 24199645 -116117120 + MIR SINE MIR 151 257 -5 21 0 0 0 chr10 24200161 24200182 -116116583 + AT_rich Low_complexity Low_complexity 1 21 0 502 205 98 0 chr10 24200586 24200698 -116116067 + MER91C DNA MER1_type 18 140 0 322 376 17 12 chr10 24200756 24200929 -116115836 + L2 LINE L2 2736 2909 -405 481 352 98 19 chr10 24201002 24201422 -116115343 + L2 LINE L2 2521 2973 -341 7585 27 8 0 chr10 24201890 24203121 -116113644 - L1PA3 LINE L1 0 6155 4921 628 257 137 13 chr10 24203150 24203376 -116113389 - MIR SINE MIR -7 255 2 864 182 0 25 chr10 24203705 24203864 -116112901 - AluSg/x SINE Alu -21 291 137 1033 95 19 0 chr10 24203864 24204022 -116112743 + L1MB4 LINE L1 6020 6180 0 335 118 106 24 chr10 24204113 24204198 -116112567 - L1PA16 LINE L1 0 6166 6075 21 0 0 0 chr10 24204583 24204604 -116112161 + AT_rich Low_complexity Low_complexity 1 21 0 527 157 222 0 chr10 24204680 24204788 -116111977 + FLAM_C SINE Alu 1 132 -1 216 0 0 0 chr10 24205195 24205219 -116111546 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 1862 149 35 14 chr10 24205720 24206009 -116110756 + AluSx SINE Alu 1 295 -17 22 70 0 0 chr10 24206053 24206096 -116110669 + AT_rich Low_complexity Low_complexity 1 43 0 450 158 28 20 chr10 24206288 24206543 -116110222 + (TA)n Simple_repeat Simple_repeat 1 257 0 1575 173 50 20 chr10 24206765 24207065 -116109700 + AluJb SINE Alu 1 309 -3 1366 195 25 7 chr10 24207113 24207390 -116109375 + L1MB4 LINE L1 5310 5591 -589 547 174 15 8 chr10 24207390 24207501 -116109264 + L1MB4 LINE L1 6048 6180 0 235 61 30 0 chr10 24207981 24208014 -116108751 + U2 snRNA snRNA 1 34 -154 730 252 83 15 chr10 24208429 24208630 -116108135 + MIR SINE MIR 50 262 0 4707 155 21 15 chr10 24210025 24210889 -116105876 + L1MB5 LINE L1 5293 6161 -13 391 60 194 0 chr10 24213292 24213359 -116103406 + MADE1 DNA Mariner 1 80 0 835 245 45 25 chr10 24213836 24214081 -116102684 + MIR SINE MIR 2 251 -11 240 327 36 36 chr10 24214700 24214810 -116101955 - MIR SINE MIR -149 113 4 22 35 0 0 chr10 24214998 24215027 -116101738 + AT_rich Low_complexity Low_complexity 1 29 0 2324 89 3 0 chr10 24215565 24215857 -116100908 - AluSg SINE Alu -17 293 1 551 132 9 0 chr10 24216448 24216554 -116100211 + Tigger7 DNA MER2_type 2262 2368 -119 310 83 21 0 chr10 24216559 24216607 -116100158 - L1PB4 LINE L1 -8 6148 6100 230 282 56 0 chr10 24217186 24217257 -116099508 - MIR SINE MIR -71 137 63 251 91 200 0 chr10 24217760 24217815 -116098950 - L1MA8 LINE L1 -113 6178 6113 1800 170 0 27 chr10 24218794 24219094 -116097671 + AluJb SINE Alu 3 294 -18 2070 112 30 0 chr10 24219887 24220183 -116096582 - AluSq SINE Alu -8 305 1 472 220 0 8 chr10 24220294 24220412 -116096353 + Charlie5 DNA MER1_type 11 127 -2485 * 1646 154 67 16 chr10 24220408 24220779 -116095986 + Charlie5 DNA MER1_type 2233 2622 0 183 220 0 0 chr10 24220873 24220923 -116095842 + (CATA)n Simple_repeat Simple_repeat 2 51 0 201 244 0 0 chr10 24220923 24220964 -116095801 + (TG)n Simple_repeat Simple_repeat 1 41 0 1648 208 108 49 chr10 24220967 24221109 -116095656 + MLT1F LTR MaLR 1 133 -409 1568 158 79 0 chr10 24221109 24221387 -116095378 + AluJo SINE Alu 1 300 -12 1648 208 108 49 chr10 24221387 24221754 -116095011 + MLT1F LTR MaLR 133 540 -2 298 268 98 8 chr10 24221769 24221801 -116094964 + L1ME LINE L1 5691 5719 -402 198 0 0 0 chr10 24221801 24221823 -116094942 + (CAAAC)n Simple_repeat Simple_repeat 3 24 0 298 268 98 8 chr10 24221823 24221913 -116094852 + L1ME LINE L1 5719 5824 -297 193 196 98 0 chr10 24222129 24222180 -116094585 + L2 LINE L2 3167 3222 -91 38 22 0 0 chr10 24222268 24222313 -116094452 + AT_rich Low_complexity Low_complexity 1 45 0 2280 122 0 0 chr10 24222358 24222670 -116094095 - AluSx SINE Alu 0 312 1 321 125 0 0 chr10 24222673 24222721 -116094044 - L1PB4 LINE L1 -31 6125 6078 1183 200 200 69 chr10 24223594 24224070 -116092695 + MLT1F LTR MaLR 1 538 -4 1790 159 7 0 chr10 24224111 24224400 -116092365 - AluJo SINE Alu -21 291 1 1560 180 21 32 chr10 24224600 24224911 -116091854 - AluSx SINE Alu 0 310 3 495 196 87 139 chr10 24225548 24225820 -116090945 + Charlie8 DNA MER1_type 5 266 -2151 21 0 0 0 chr10 24226890 24226911 -116089854 + AT_rich Low_complexity Low_complexity 1 21 0 2327 97 0 3 chr10 24227666 24227966 -116088799 + AluSg1 SINE Alu 3 301 -8 203 171 0 24 chr10 24227970 24228011 -116088754 + GA-rich Low_complexity Low_complexity 2 41 0 269 308 64 0 chr10 24228145 24228223 -116088542 + L2 LINE L2 3229 3311 -2 852 289 93 14 chr10 24228275 24228631 -116088134 - MLT1L LTR MaLR -10 605 222 25 65 0 0 chr10 24229453 24229499 -116087266 + AT_rich Low_complexity Low_complexity 1 46 0 194 288 14 27 chr10 24229827 24229900 -116086865 + L2 LINE L2 3242 3313 0 1085 183 27 27 chr10 24232414 24232633 -116084132 - MER20 DNA MER1_type 0 219 1 21 36 0 0 chr10 24233315 24233343 -116083422 + AT_rich Low_complexity Low_complexity 1 28 0 290 233 29 68 chr10 24234152 24234255 -116082510 + L2 LINE L2 3174 3272 0 28 48 0 0 chr10 24236830 24236872 -116079893 + AT_rich Low_complexity Low_complexity 1 42 0 25 31 0 0 chr10 24236980 24237012 -116079753 + AT_rich Low_complexity Low_complexity 1 32 0 205 179 26 0 chr10 24237542 24237581 -116079184 + CT-rich Low_complexity Low_complexity 3 42 0 760 196 12 0 chr10 24238341 24238514 -116078251 - L1M4 LINE L1 -783 5363 5189 4340 172 43 7 chr10 24238752 24239031 -116077734 - L1MB8 LINE L1 0 6178 5911 1643 185 17 14 chr10 24239031 24239318 -116077447 - AluJo SINE Alu -24 288 1 4340 172 43 7 chr10 24239318 24240127 -116076638 - L1MB8 LINE L1 -267 5911 5041 1207 137 114 24 chr10 24240231 24240474 -116076291 - MSTA LTR MaLR 0 428 160 2199 124 11 8 chr10 24240474 24240828 -116075937 + THE1A LTR MaLR 1 355 0 1207 137 114 24 chr10 24240828 24240839 -116075926 - MSTA LTR MaLR -268 160 151 3198 187 66 52 chr10 24241471 24241508 -116075257 + L1M4 LINE L1 4215 4250 -1896 270 56 0 0 chr10 24241508 24241544 -116075221 + (CA)n Simple_repeat Simple_repeat 1 36 0 3198 187 66 52 chr10 24241544 24241612 -116075153 + L1M4 LINE L1 4250 4316 -1830 1927 118 0 69 chr10 24241612 24241918 -116074847 - AluSx SINE Alu -19 293 9 3198 187 66 52 chr10 24241918 24242757 -116074008 + L1M4 LINE L1 4316 5177 -969 1665 194 7 10 chr10 24242757 24243050 -116073715 + AluJo SINE Alu 3 294 -18 3198 187 66 52 chr10 24243050 24243108 -116073657 + L1M4 LINE L1 5177 5233 -913 2239 109 0 0 chr10 24243135 24243428 -116073337 - AluSx SINE Alu -19 293 1 1977 166 3 29 chr10 24243439 24243824 -116072941 - L1MB8 LINE L1 -1 6177 5803 746 273 77 9 chr10 24246300 24246520 -116070245 + MIR SINE MIR 10 244 -18 3109 59 5 2 chr10 24247447 24247853 -116068912 - L1PA3 LINE L1 -4 6151 5745 24 32 0 0 chr10 24250485 24250516 -116066249 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr10 24257087 24257115 -116059650 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 24258694 24258716 -116058049 + GC_rich Low_complexity Low_complexity 1 22 0 381 302 84 80 chr10 24262632 24263302 -116053463 + L1M2 LINE L1 767 1407 -5442 210 143 0 0 chr10 24268516 24268551 -116048214 + (GGGAGA)n Simple_repeat Simple_repeat 3 37 0 920 23 8 23 chr10 24268591 24268721 -116048044 + (TTC)n Simple_repeat Simple_repeat 2 129 0 1730 166 92 3 chr10 24269018 24269397 -116047368 - L1MD2 LINE L1 -17 6342 5930 2130 100 0 0 chr10 24270154 24270425 -116046340 - AluSc SINE Alu -14 295 25 1952 137 27 3 chr10 24270991 24271161 -116045604 - AluSx SINE Alu -10 302 121 216 0 0 0 chr10 24271161 24271185 -116045580 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1952 137 27 3 chr10 24271185 24271307 -116045458 - AluSx SINE Alu -191 121 3 303 389 78 18 chr10 24272756 24272923 -116043842 + L2 LINE L2 2924 3100 -172 236 293 13 27 chr10 24273096 24273171 -116043594 - MIR SINE MIR -119 89 16 1984 100 43 4 chr10 24274051 24274332 -116042433 + AluY SINE Alu 1 292 -19 255 61 0 0 chr10 24274354 24274387 -116042378 + (TG)n Simple_repeat Simple_repeat 2 34 0 2169 96 31 0 chr10 24274676 24274968 -116041797 - AluSq SINE Alu -11 302 2 483 302 79 69 chr10 24275782 24276411 -116040354 - L2 LINE L2 0 3313 2597 2106 86 61 0 chr10 24276889 24277169 -116039596 + AluSx SINE Alu 1 297 -15 427 271 0 0 chr10 24277392 24277499 -116039266 + MIR SINE MIR 151 257 -5 21 0 0 0 chr10 24278015 24278036 -116038729 + AT_rich Low_complexity Low_complexity 1 21 0 510 205 98 0 chr10 24278440 24278552 -116038213 + MER91C DNA MER1_type 18 140 0 323 376 17 12 chr10 24278610 24278783 -116037982 + L2 LINE L2 2736 2909 -405 484 324 77 79 chr10 24278856 24279527 -116037238 + L2 LINE L2 2521 3186 -86 40581 34 24 2 chr10 24279744 24285763 -116031002 - L1PA3 LINE L1 0 6155 1 332 274 96 38 chr10 24286016 24286173 -116030592 - L2 LINE L2 -15 3298 3133 438 238 31 168 chr10 24286823 24286942 -116029823 - L2 LINE L2 0 3272 3138 29 0 0 0 chr10 24286942 24286971 -116029794 + AT_rich Low_complexity Low_complexity 1 29 0 438 238 31 168 chr10 24286971 24287283 -116029482 - L2 LINE L2 -134 3138 2871 2468 58 0 16 chr10 24288451 24288763 -116028002 - AluY SINE Alu -4 307 1 2076 86 0 7 chr10 24289212 24289481 -116027284 - AluSc SINE Alu -42 267 1 204 40 0 0 chr10 24289677 24289702 -116027063 + (A)n Simple_repeat Simple_repeat 1 25 0 2060 93 43 7 chr10 24290133 24290411 -116026354 + AluSx SINE Alu 1 288 -24 220 340 93 0 chr10 24290512 24290609 -116026156 - L2 LINE L2 -11 3261 3156 1307 188 45 51 chr10 24290631 24290923 -116025842 + AluJo SINE Alu 1 290 -22 448 210 76 8 chr10 24291102 24291221 -116025544 - MLT1J LTR MaLR -384 127 1 2096 98 106 53 chr10 24291364 24291477 -116025288 - MER51B LTR ERV1 0 377 271 2390 59 0 3 chr10 24291477 24291780 -116024985 + AluY SINE Alu 1 302 -9 2096 98 106 53 chr10 24291780 24292024 -116024741 - MER51B LTR ERV1 -106 271 1 2274 268 85 33 chr10 24292885 24294062 -116022703 + L2 LINE L2 2075 3313 0 1075 168 0 17 chr10 24294160 24294339 -116022426 - FRAM SINE Alu 0 40 1 219 293 17 0 chr10 24294357 24294415 -116022350 + L2 LINE L2 3247 3305 -8 628 212 80 80 chr10 24294423 24294649 -116022116 + MIR SINE MIR 11 236 -26 2386 97 7 0 chr10 24294874 24295183 -116021582 + AluSx SINE Alu 1 311 -1 1988 107 0 21 chr10 24295222 24295503 -116021262 + L1PA15 LINE L1 5888 6162 -3 1968 90 26 48 chr10 24295613 24295923 -116020842 - AluSx SINE Alu -9 303 1 194 400 0 0 chr10 24296024 24296109 -116020656 - MIR SINE MIR -130 132 48 2169 104 0 42 chr10 24296137 24296444 -116020321 - AluSg SINE Alu -14 296 3 1871 114 0 29 chr10 24296703 24296984 -116019781 - AluSg SINE Alu -9 301 29 2492 73 0 0 chr10 24297693 24297993 -116018772 + AluY SINE Alu 1 300 -11 1862 166 13 0 chr10 24298108 24298410 -116018355 - AluSx SINE Alu -6 306 1 22 35 0 0 chr10 24299256 24299285 -116017480 + AT_rich Low_complexity Low_complexity 1 29 0 207 182 45 30 chr10 24299418 24299484 -116017281 + (TTATA)n Simple_repeat Simple_repeat 4 70 0 321 290 32 0 chr10 24299492 24299585 -116017180 + MIR3 SINE MIR 106 201 -7 25 0 0 0 chr10 24299818 24299843 -116016922 + AT_rich Low_complexity Low_complexity 1 25 0 924 127 0 0 chr10 24299929 24300055 -116016710 + AluJ SINE Alu 1 126 -186 1180 114 6 11 chr10 24300066 24300242 -116016523 + LTR9 LTR ERV1 438 612 0 2563 152 21 44 chr10 24300244 24300621 -116016144 + HUERS-P3 LTR ERV1 2 367 -8552 2591 50 0 0 chr10 24300621 24300919 -116015846 - AluY SINE Alu -13 298 1 2563 152 21 44 chr10 24300919 24301016 -116015749 + HUERS-P3 LTR ERV1 367 465 -8454 480 82 0 27 chr10 24301025 24301098 -116015667 + LTR9 LTR ERV1 457 527 -85 1222 138 0 16 chr10 24301107 24301295 -116015470 + AluJ SINE Alu 127 311 -1 2063 216 137 13 chr10 24301297 24301829 -116014936 - L1ME3A LINE L1 -121 6049 5452 6852 190 25 57 chr10 24301866 24302494 -116014271 - L1MB5 LINE L1 -8 6166 5520 1759 147 61 3 chr10 24302494 24302787 -116013978 + AluSx SINE Alu 1 310 -2 6852 190 25 57 chr10 24302787 24304045 -116012720 - L1MB5 LINE L1 -654 5520 4398 2224 106 0 0 chr10 24304045 24304354 -116012411 + AluSx SINE Alu 1 309 0 6852 190 25 57 chr10 24304354 24305179 -116011586 - L1MB5 LINE L1 -1776 4398 3548 556 184 70 59 chr10 24305181 24305282 -116011483 - L1ME3A LINE L1 -723 5439 5341 1956 148 10 0 chr10 24305282 24305572 -116011193 + AluSx SINE Alu 1 293 -19 556 184 70 59 chr10 24305572 24305709 -116011056 - L1ME3A LINE L1 -821 5341 5188 183 80 0 0 chr10 24305859 24305884 -116010881 + (CA)n Simple_repeat Simple_repeat 1 25 0 1706 141 7 25 chr10 24305946 24306223 -116010542 - AluJo SINE Alu -36 276 5 703 205 0 8 chr10 24306694 24306816 -116009949 - AluJb SINE Alu -190 122 2 1219 127 6 11 chr10 24307520 24307701 -116009064 - AluJo SINE Alu -66 246 67 334 345 21 7 chr10 24308160 24308302 -116008463 - MIR SINE MIR 0 262 119 1739 173 0 27 chr10 24308542 24308843 -116007922 - AluJb SINE Alu -19 293 1 1590 164 58 0 chr10 24309162 24309437 -116007328 - AluJo SINE Alu -17 295 5 208 143 0 0 chr10 24309834 24309869 -116006896 + (A)n Simple_repeat Simple_repeat 1 35 0 2442 68 0 0 chr10 24310034 24310329 -116006436 + AluY SINE Alu 1 295 -16 180 0 0 0 chr10 24310471 24310491 -116006274 + (TA)n Simple_repeat Simple_repeat 2 21 0 419 259 63 52 chr10 24311175 24311349 -116005416 + MIR SINE MIR 17 192 -70 348 163 75 0 chr10 24311367 24311447 -116005318 + Charlie5 DNA MER1_type 28 113 -2499 415 90 333 0 chr10 24311452 24311530 -116005235 + Charlie5 DNA MER1_type 2234 2337 -275 2166 107 3 0 chr10 24311559 24311848 -116004917 - AluSp SINE Alu -23 290 1 67 65 0 0 chr10 24311994 24312117 -116004648 + AT_rich Low_complexity Low_complexity 1 123 0 21 0 0 0 chr10 24312871 24312892 -116003873 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 24315281 24315303 -116001462 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 24316607 24316628 -116000137 + AT_rich Low_complexity Low_complexity 1 21 0 2470 60 0 3 chr10 24317115 24317414 -115999351 - AluY SINE Alu -13 298 1 200 217 109 65 chr10 24317733 24317825 -115998940 + MIR SINE MIR 30 125 -83 340 233 89 11 chr10 24317958 24318048 -115998717 - MER91B DNA MER1_type -4 186 90 570 148 0 111 chr10 24318065 24318200 -115998565 - MER91B DNA MER1_type -60 130 11 28 29 0 0 chr10 24318580 24318615 -115998150 + AT_rich Low_complexity Low_complexity 1 35 0 1002 212 146 25 chr10 24318827 24319101 -115997664 + HERV16 LTR ERVL 953 1259 -3737 932 333 36 0 chr10 24319307 24319610 -115997155 + HERV16 LTR ERVL 1263 1576 -3420 641 303 17 0 chr10 24319625 24319803 -115996962 + HERV16 LTR ERVL 1681 1861 -3135 1541 302 42 58 chr10 24319838 24320050 -115996715 + HERV16 LTR ERVL 3126 3340 -2424 1842 181 7 0 chr10 24320050 24320354 -115996411 + AluJo SINE Alu 1 306 -6 1541 302 42 58 chr10 24320354 24320968 -115995797 + HERV16 LTR ERVL 3340 3939 -1825 1086 312 66 42 chr10 24321073 24322222 -115994543 + HERV16 LTR ERVL 4071 5346 -418 374 295 36 36 chr10 24323210 24323322 -115993443 + L2 LINE L2 3161 3272 0 366 107 0 0 chr10 24323647 24323703 -115993062 + (TG)n Simple_repeat Simple_repeat 1 56 0 219 234 19 84 chr10 24326580 24326687 -115990078 + MIR SINE MIR 134 233 -29 600 252 8 78 chr10 24326701 24326943 -115989822 + MIR SINE MIR 31 255 -7 317 194 56 0 chr10 24327261 24327333 -115989432 + MIR SINE MIR 116 191 -71 242 286 168 29 chr10 24327813 24328325 -115988440 - L1 LINE L1 -1098 5048 4476 240 290 117 19 chr10 24328461 24328675 -115988090 - L1 LINE L1 -1857 4289 4055 403 327 126 6 chr10 24328772 24329090 -115987675 + L1MC4a LINE L1 5527 5882 -1926 1503 82 0 0 chr10 24329099 24329281 -115987484 + AluSx SINE Alu 1 182 -130 22 35 0 0 chr10 24329327 24329356 -115987409 + AT_rich Low_complexity Low_complexity 1 29 0 305 293 73 58 chr10 24329437 24329628 -115987137 - L1 LINE L1 -2228 3918 3725 1429 191 75 14 chr10 24329665 24329947 -115986818 - AluJb SINE Alu -12 300 2 1875 87 8 4 chr10 24330240 24330481 -115986284 + AluY SINE Alu 55 296 -15 203 189 0 0 chr10 24330504 24330541 -115986224 + T-rich Low_complexity Low_complexity 1 37 0 597 237 124 27 chr10 24330764 24330950 -115985815 + MARNA DNA Mariner 299 502 -84 549 319 58 16 chr10 24332925 24333238 -115983527 - L1ME1 LINE L1 -15 6151 5826 763 175 15 0 chr10 24334793 24334930 -115981835 - L1PB4 LINE L1 -3 6153 6015 191 0 103 0 chr10 24334983 24335012 -115981753 + A-rich Low_complexity Low_complexity 1 32 0 429 262 117 44 chr10 24335088 24335294 -115981471 + L2 LINE L2 3092 3312 -1 540 180 9 63 chr10 24336085 24336196 -115980569 - L2 LINE L2 -2 3311 3207 21 36 0 0 chr10 24336660 24336688 -115980077 + AT_rich Low_complexity Low_complexity 1 28 0 594 264 29 11 chr10 24337093 24337267 -115979498 + MER5B DNA MER1_type 2 178 0 1117 193 11 0 chr10 24337296 24337483 -115979282 - MER5A DNA MER1_type 0 189 1 207 0 0 0 chr10 24337845 24337868 -115978897 + (CA)n Simple_repeat Simple_repeat 2 24 0 203 152 0 0 chr10 24337869 24337902 -115978863 + GA-rich Low_complexity Low_complexity 2 34 0 790 226 198 67 chr10 24338556 24338976 -115977789 - MLT1H LTR MaLR -22 527 53 1155 179 104 21 chr10 24338979 24339258 -115977507 + L1ME1 LINE L1 5864 6165 -1 476 247 78 7 chr10 24339318 24339472 -115977293 - MIR3 SINE MIR -13 195 31 2472 187 55 4 chr10 24341096 24341589 -115975176 - LTR53 LTR ERVL -1 518 1 193 267 33 0 chr10 24341961 24342021 -115974744 - L2 LINE L2 -242 3030 2969 334 269 124 97 chr10 24342672 24343003 -115973762 + L2 LINE L2 2932 3271 -1 1690 221 45 53 chr10 24343014 24343655 -115973110 + L1MC5 LINE L1 7296 7931 -30 487 238 63 53 chr10 24344551 24344757 -115972008 - MIR SINE MIR -2 260 53 1654 180 0 18 chr10 24344841 24345125 -115971640 - AluJo SINE Alu -20 292 14 205 277 85 11 chr10 24345796 24345890 -115970875 - MIR SINE MIR 0 262 162 2453 188 94 49 chr10 24346780 24347451 -115969314 + L1ME3A LINE L1 5461 6161 -9 1930 149 0 14 chr10 24347522 24347839 -115968926 + AluJb SINE Alu 1 313 0 1622 207 36 17 chr10 24348193 24348551 -115968214 - MLT1A1 LTR MaLR 0 365 1 839 149 0 30 chr10 24348856 24348990 -115967775 + AluJo SINE Alu 5 134 -178 654 278 5 43 chr10 24349281 24349490 -115967275 - MIR SINE MIR -1 261 61 288 203 203 117 chr10 24349500 24349531 -115967234 - MER5B DNA MER1_type -1 177 150 1793 139 16 36 chr10 24349531 24349710 -115967055 - AluJo SINE Alu -15 297 125 2540 64 0 0 chr10 24349710 24350021 -115966744 + AluY SINE Alu 1 311 0 1793 139 16 36 chr10 24350021 24350144 -115966621 - AluJo SINE Alu -187 125 1 288 203 203 117 chr10 24350144 24350275 -115966490 - MER5B DNA MER1_type -28 150 1 298 175 113 38 chr10 24350474 24350554 -115966211 + MIR3 SINE MIR 120 205 -3 1004 184 0 0 chr10 24351887 24352055 -115964710 - FRAM SINE Alu 0 176 9 241 281 41 48 chr10 24353117 24353263 -115963502 + L1ME LINE L1 5634 5778 -343 1973 134 0 13 chr10 24353612 24353910 -115962855 - AluJo SINE Alu -16 296 3 2009 115 45 3 chr10 24355184 24355472 -115961293 + AluJo SINE Alu 1 300 -12 34 0 0 0 chr10 24355474 24355508 -115961257 + AT_rich Low_complexity Low_complexity 1 34 0 1779 142 9 64 chr10 24356032 24356362 -115960403 + AluJo SINE Alu 1 312 0 354 233 129 64 chr10 24356577 24356779 -115959986 + LTR45 LTR ERV1 372 586 -17 243 0 0 0 chr10 24357533 24357560 -115959205 + (CA)n Simple_repeat Simple_repeat 1 27 0 629 264 63 38 chr10 24357844 24358083 -115958682 - MIR SINE MIR 0 262 18 1037 164 0 0 chr10 24358214 24358373 -115958392 - FRAM SINE Alu -22 154 1 2062 120 7 0 chr10 24358386 24358669 -115958096 - AluSx SINE Alu -25 287 3 1971 141 3 3 chr10 24359325 24359622 -115957143 - AluJo SINE Alu -15 297 1 261 0 0 0 chr10 24360171 24360200 -115956565 + (GA)n Simple_repeat Simple_repeat 2 30 0 191 61 30 0 chr10 24360267 24360300 -115956465 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 263 203 14 0 chr10 24360907 24360976 -115955789 + GA-rich Low_complexity Low_complexity 2 71 0 203 269 48 62 chr10 24361066 24361159 -115955606 - MIR SINE MIR -40 222 130 1727 141 17 47 chr10 24361159 24361458 -115955307 - AluJo SINE Alu -22 290 1 203 269 48 62 chr10 24361458 24361509 -115955256 - MIR SINE MIR -132 130 80 721 218 4 77 chr10 24362373 24362621 -115954144 - L1MC5 LINE L1 -36 7925 7696 1734 180 3 16 chr10 24362744 24363050 -115953715 + AluJo SINE Alu 2 303 -9 475 194 142 0 chr10 24363100 24363234 -115953531 - MIR SINE MIR -28 234 82 2179 142 0 0 chr10 24364044 24364355 -115952410 - AluSx SINE Alu -1 311 1 794 129 8 23 chr10 24364811 24364943 -115951822 - FLAM_C SINE Alu -3 130 1 1702 180 50 0 chr10 24366127 24366469 -115950296 + AluJb SINE Alu 1 312 0 614 271 45 40 chr10 24367020 24367076 -115949689 - MIR SINE MIR -13 249 195 1742 188 109 0 chr10 24367076 24367405 -115949360 - MLT1A1 LTR MaLR 0 365 1 614 271 45 40 chr10 24367405 24367595 -115949170 - MIR SINE MIR -67 195 2 1816 158 0 58 chr10 24368120 24368450 -115948315 - AluJo SINE Alu -1 311 1 251 314 124 0 chr10 24368952 24369073 -115947692 + L2 LINE L2 3136 3271 -1 1590 152 20 12 chr10 24369283 24369562 -115947203 - AluJb SINE Alu 0 312 32 508 328 48 32 chr10 24369743 24369993 -115946772 - MIR SINE MIR 0 262 9 304 198 37 0 chr10 24371564 24371645 -115945120 + L1ME2 LINE L1 6080 6163 -1 1355 162 142 10 chr10 24371654 24371963 -115944802 + L1MC3 LINE L1 7436 7785 0 189 0 0 0 chr10 24376059 24376080 -115940685 + (TC)n Simple_repeat Simple_repeat 1 21 0 290 225 14 0 chr10 24376534 24376605 -115940160 - MIR SINE MIR -110 152 81 198 0 0 0 chr10 24376653 24376675 -115940090 + (CACCAT)n Simple_repeat Simple_repeat 3 24 0 1792 140 52 78 chr10 24376823 24377208 -115939557 + THE1C LTR MaLR 1 375 0 648 215 134 11 chr10 24377940 24378126 -115938639 - MIR SINE MIR 0 262 54 1468 155 8 8 chr10 24378247 24378486 -115938279 - AluJb SINE Alu -69 243 5 992 205 31 35 chr10 24379460 24379549 -115937216 + MER96B DNA MER1_type? 1 89 -328 1576 142 19 91 chr10 24379549 24379867 -115936898 - AluJb SINE Alu -17 295 1 992 205 31 35 chr10 24379867 24380035 -115936730 + MER96B DNA MER1_type? 89 257 -160 267 309 64 0 chr10 24380491 24380601 -115936164 - MIR SINE MIR -33 229 113 333 374 52 22 chr10 24380969 24381293 -115935472 - L1ME LINE L1 -532 5589 5256 540 273 57 19 chr10 24431862 24432071 -115884694 - L2 LINE L2 -727 2587 2371 366 269 107 73 chr10 24432140 24432374 -115884391 - L2 LINE L2 -843 2471 2230 551 139 10 20 chr10 24432397 24432498 -115884267 + FRAM SINE Alu 72 171 -5 1724 183 0 16 chr10 24432519 24432830 -115883935 + AluJo SINE Alu 1 306 -6 2484 59 0 3 chr10 24432833 24433137 -115883628 + AluY SINE Alu 1 303 -8 1460 165 24 24 chr10 24433715 24433969 -115882796 + AluJo SINE Alu 1 254 -58 199 75 0 50 chr10 24433996 24434036 -115882729 + (GAGAA)n Simple_repeat Simple_repeat 5 42 0 453 144 240 0 chr10 24434053 24434157 -115882608 + L1MB2 LINE L1 5696 5824 -356 1067 171 20 28 chr10 24434293 24434544 -115882221 + L1MB2 LINE L1 5912 6160 -11 938 254 111 38 chr10 24434672 24435157 -115881608 - MLT1F1 LTR MaLR -18 549 23 313 326 22 0 chr10 24435276 24435411 -115881354 + HAL1b LINE L1 475 612 -736 728 225 48 5 chr10 24435427 24435614 -115881151 + MER58A DNA MER1_type 30 224 0 241 269 59 25 chr10 24435625 24435744 -115881021 + HAL1b LINE L1 639 761 -587 879 292 78 48 chr10 24436171 24436860 -115879905 + L1 LINE L1 2197 2906 -3240 2016 148 22 8 chr10 24436861 24437218 -115879547 + Tigger1 DNA MER2_type 1 362 -2056 5161 73 11 3 chr10 24437218 24438116 -115878649 - L1PA8 LINE L1 -208 6279 5376 11360 121 29 7 chr10 24438216 24439319 -115877446 - L1PA8 LINE L1 -2674 3787 2710 201 39 0 0 chr10 24439319 24439345 -115877420 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 11360 121 29 7 chr10 24439345 24441180 -115875585 - L1PA8 LINE L1 -3751 2710 779 503 242 51 32 chr10 24441233 24441390 -115875375 + MLT1D LTR MaLR 210 369 -136 870 225 64 0 chr10 24441390 24441577 -115875188 - L1M4 LINE L1 -527 6155 5957 3145 212 76 10 chr10 24441589 24442404 -115874361 - L1M4 LINE L1 -1092 5552 4684 623 207 57 7 chr10 24442406 24442546 -115874219 + MLT1A2 LTR MaLR 228 374 0 814 244 61 0 chr10 24442547 24442760 -115874005 - L1M4 LINE L1 -2028 4616 4391 784 201 29 42 chr10 24442780 24443019 -115873746 - L1M4 LINE L1 -3097 3547 3312 * 1700 205 37 42 chr10 24442996 24443358 -115873407 - L1M4 LINE L1 -4945 1597 1236 1761 148 31 17 chr10 24443358 24443648 -115873117 - AluSx SINE Alu -18 294 1 1700 205 37 42 chr10 24443648 24443767 -115872998 - L1M4 LINE L1 -5306 1236 1118 1772 90 32 111 chr10 24444059 24444402 -115872363 - L1P3 LINE L1 -3640 2821 2506 * 9775 130 28 3 chr10 24444399 24445888 -115870877 - L1P3 LINE L1 -4935 1526 1 653 241 151 25 chr10 24446036 24446235 -115870530 - MER58A DNA MER1_type 0 224 1 213 214 0 0 chr10 24446287 24446329 -115870436 + GA-rich Low_complexity Low_complexity 4 45 0 1275 157 0 14 chr10 24446333 24446549 -115870216 + AluJo SINE Alu 100 312 0 191 379 63 0 chr10 24446604 24446699 -115870066 - MER5A DNA MER1_type 0 189 89 450 235 10 0 chr10 24446894 24446992 -115869773 + MIR SINE MIR 44 142 -66 2305 110 0 3 chr10 24447264 24447573 -115869192 - AluSx SINE Alu -4 308 1 27 0 0 0 chr10 24447796 24447823 -115868942 + AT_rich Low_complexity Low_complexity 1 27 0 1291 136 4 75 chr10 24447830 24448058 -115868707 - AluJo SINE Alu -49 263 52 2261 103 15 29 chr10 24449146 24449486 -115867279 - MER1B DNA MER1_type -2 335 1 192 182 0 0 chr10 24451604 24451648 -115865117 + (CAT)n Simple_repeat Simple_repeat 2 45 0 216 0 0 0 chr10 24451678 24451702 -115865063 + (A)n Simple_repeat Simple_repeat 1 24 0 243 88 0 0 chr10 24451781 24451815 -115864950 + (CTCA)n Simple_repeat Simple_repeat 2 35 0 185 182 18 0 chr10 24451901 24451956 -115864809 + (CA)n Simple_repeat Simple_repeat 1 56 0 385 241 31 98 chr10 24454119 24454340 -115862425 + MIR SINE MIR 11 217 -45 477 50 0 0 chr10 24454850 24454910 -115861855 + (GA)n Simple_repeat Simple_repeat 1 60 0 2207 110 10 0 chr10 24455702 24455994 -115860771 - AluSp SINE Alu -18 295 1 278 272 39 10 chr10 24456596 24456699 -115860066 + (TATG)n Simple_repeat Simple_repeat 2 107 0 1737 146 4 15 chr10 24461063 24461337 -115855428 - AluJo SINE Alu -16 296 26 2046 138 3 0 chr10 24461777 24462067 -115854698 - AluJo SINE Alu -21 291 1 200 303 15 0 chr10 24462753 24462819 -115853946 + MIR SINE MIR 81 147 -61 1668 67 9 0 chr10 24463557 24463767 -115852998 + AluY SINE Alu 100 311 0 241 289 35 35 chr10 24467248 24467390 -115849375 + MIR SINE MIR 10 151 -111 266 281 164 20 chr10 24467438 24467584 -115849181 - MIR SINE MIR -56 206 40 216 0 0 0 chr10 24467742 24467766 -115848999 + (T)n Simple_repeat Simple_repeat 1 24 0 1848 167 0 16 chr10 24467806 24468112 -115848653 + AluJb SINE Alu 1 301 -11 610 223 94 5 chr10 24469152 24469354 -115847411 + MIR SINE MIR 15 234 -28 471 227 100 27 chr10 24469490 24469640 -115847125 + MIR SINE MIR 76 236 -26 1454 88 60 9 chr10 24469752 24469967 -115846798 + MER30 DNA MER1_type 4 229 -1 594 298 44 24 chr10 24475832 24476084 -115840681 + MIR SINE MIR 2 258 -4 237 268 105 42 chr10 24476945 24477135 -115839630 + L2 LINE L2 1804 2005 -1309 211 356 10 29 chr10 24477135 24477239 -115839526 + L2 LINE L2 3149 3250 -22 257 270 96 89 chr10 24477269 24477468 -115839297 + L2 LINE L2 2109 2305 -967 8723 56 9 4 chr10 24477468 24478533 -115838232 + MER11C LTR ERVK 1 1071 0 257 270 96 89 chr10 24478533 24479083 -115837682 + L2 LINE L2 2305 3154 -118 254 350 70 14 chr10 24479563 24479706 -115837059 - MIR3 SINE MIR -25 183 33 214 286 71 41 chr10 24480671 24480769 -115835996 - L2 LINE L2 -4 3268 3168 300 83 0 0 chr10 24481825 24481873 -115834892 + (TG)n Simple_repeat Simple_repeat 2 49 0 25 51 0 0 chr10 24481983 24482022 -115834743 + AT_rich Low_complexity Low_complexity 1 39 0 462 267 48 12 chr10 24482336 24482501 -115834264 - MIR SINE MIR -6 256 86 846 257 52 0 chr10 24482805 24483015 -115833750 + Charlie1a DNA MER1_type 2 222 -1233 4459 190 64 38 chr10 24483199 24484321 -115832444 + Charlie1a DNA MER1_type 301 1451 -4 784 250 9 47 chr10 24484334 24484514 -115832251 - MER58A DNA MER1_type -2196 224 53 1745 167 43 7 chr10 24484514 24484814 -115831951 + AluJb SINE Alu 1 311 -1 784 250 9 47 chr10 24484814 24484865 -115831900 - MER58A DNA MER1_type -2367 53 2 186 175 35 53 chr10 24484897 24484954 -115831811 + L2 LINE L2 2706 2761 -553 670 258 194 25 chr10 24484968 24485282 -115831483 + L2 LINE L2 2932 3298 -15 372 328 51 15 chr10 24487152 24487347 -115829418 + MIR SINE MIR 21 222 -40 2339 108 0 0 chr10 24487839 24488145 -115828620 + AluSg SINE Alu 2 307 -3 436 226 219 7 chr10 24488737 24488883 -115827882 + MIR SINE MIR 61 237 -25 2162 101 10 17 chr10 24488983 24489280 -115827485 + AluSx SINE Alu 10 304 -8 215 331 31 54 chr10 24489290 24489420 -115827345 - L2 LINE L2 -4 3309 3183 1151 168 66 1 chr10 24489469 24489835 -115826930 + MSTB1 LTR MaLR 1 432 0 216 275 64 28 chr10 24489908 24490017 -115826748 + L2 LINE L2 1597 1709 -1605 331 267 223 5 chr10 24490122 24490324 -115826441 + L1MC5 LINE L1 7620 7865 -96 240 362 107 26 chr10 24490370 24490914 -115825851 + L2 LINE L2 1698 2285 -1029 2100 137 0 9 chr10 24491804 24492119 -115824646 + AluSx SINE Alu 1 312 0 772 209 0 0 chr10 24492549 24492688 -115824077 + FLAM_C SINE Alu 2 140 -3 783 123 0 0 chr10 24493658 24493772 -115822993 + FLAM_A SINE Alu 29 142 0 1913 118 55 14 chr10 24494012 24494301 -115822464 + AluJo SINE Alu 1 301 -11 330 132 0 0 chr10 24494866 24494919 -115821846 + (GGGAA)n Simple_repeat Simple_repeat 4 56 0 189 0 0 0 chr10 24495072 24495093 -115821672 + (A)n Simple_repeat Simple_repeat 1 21 0 1832 150 49 3 chr10 24496136 24496422 -115820343 - AluSx SINE Alu -13 299 1 2416 97 0 0 chr10 24497058 24497357 -115819408 - AluSx SINE Alu -13 299 1 610 294 57 4 chr10 24497358 24497586 -115819179 - MIR SINE MIR -17 245 6 219 114 0 0 chr10 24499145 24499180 -115817585 + (TGAA)n Simple_repeat Simple_repeat 2 36 0 23 0 0 0 chr10 24499270 24499293 -115817472 + AT_rich Low_complexity Low_complexity 1 23 0 264 159 63 48 chr10 24500326 24500389 -115816376 - MARNA DNA Mariner -182 404 341 1444 172 89 61 chr10 24500426 24500787 -115815978 + MLT1A2 LTR MaLR 1 371 -3 586 315 35 13 chr10 24500962 24501106 -115815659 - MIR SINE MIR -7 255 103 1794 167 3 20 chr10 24501106 24501400 -115815365 + AluJo SINE Alu 1 289 -23 586 315 35 13 chr10 24501400 24501487 -115815278 - MIR SINE MIR -159 103 19 669 300 16 24 chr10 24502661 24502908 -115813857 - MIR SINE MIR -11 251 7 298 229 292 0 chr10 24504532 24504676 -115812089 - MER5A DNA MER1_type 0 189 4 1968 155 0 13 chr10 24504919 24505223 -115811542 - AluSx SINE Alu -11 301 2 237 310 9 60 chr10 24505702 24505818 -115810947 - MIR SINE MIR -65 197 88 1775 145 4 4 chr10 24506006 24506268 -115810497 + AluSx SINE Alu 7 268 -44 181 269 0 19 chr10 24506326 24506378 -115810387 + MIR SINE MIR 102 152 -110 2458 73 3 0 chr10 24506449 24506751 -115810014 + AluSp SINE Alu 1 303 -10 400 200 60 0 chr10 24507229 24507329 -115809436 - MIR3 SINE MIR -11 197 92 1744 190 7 0 chr10 24508601 24508906 -115807859 + AluJo SINE Alu 1 307 -5 14012 113 12 27 chr10 24509677 24511886 -115804879 - L1P LINE L1 -3393 2753 578 360 304 8 33 chr10 24512010 24512286 -115804479 + GA-rich Low_complexity Low_complexity 1 269 0 210 191 0 0 chr10 24512299 24512341 -115804424 + GA-rich Low_complexity Low_complexity 2 43 0 207 296 0 56 chr10 24512357 24512482 -115804283 + GA-rich Low_complexity Low_complexity 2 119 0 1227 200 29 18 chr10 24513202 24513482 -115803283 - L1MB8 LINE L1 -11 6167 5885 372 273 49 7 chr10 24514464 24514607 -115802158 - MIR3 SINE MIR -25 183 35 216 271 0 17 chr10 24514851 24514910 -115801855 - L2 LINE L2 -10 3303 3246 341 20 40 0 chr10 24515152 24515202 -115801563 + AluSx SINE Alu 250 301 0 2019 153 0 3 chr10 24516162 24516506 -115800259 + AluJo SINE Alu 5 347 0 745 173 8 0 chr10 24516755 24516888 -115799877 - FLAM_A SINE Alu 0 142 9 273 268 52 10 chr10 24516897 24516994 -115799771 - L2 LINE L2 -14 3299 3199 24 0 0 0 chr10 24517172 24517196 -115799569 + AT_rich Low_complexity Low_complexity 1 24 0 229 247 49 37 chr10 24517809 24517890 -115798875 + L2 LINE L2 3230 3311 -2 294 95 0 0 chr10 24518182 24518224 -115798541 + (CA)n Simple_repeat Simple_repeat 1 42 0 1699 119 0 24 chr10 24520263 24520514 -115796251 + AluJo SINE Alu 54 298 -14 1767 139 108 0 chr10 24520997 24521320 -115795445 - MER46B DNA MER2_type -3 233 1 1752 162 0 40 chr10 24522770 24523073 -115793692 + AluJo SINE Alu 1 291 -21 314 386 78 0 chr10 24523189 24523342 -115793423 + L2 LINE L2 3087 3251 -21 504 233 35 0 chr10 24524999 24525115 -115791650 + L1MEd LINE L1 829 948 -5424 285 254 49 65 chr10 24525230 24525298 -115791467 + L1MEd LINE L1 1307 1375 -5009 1700 146 19 62 chr10 24525298 24525620 -115791145 + AluJo SINE Alu 5 312 0 285 254 49 65 chr10 24525620 24525736 -115791029 + L1MEd LINE L1 1375 1488 -4896 204 240 0 20 chr10 24526388 24526438 -115790327 - L2 LINE L2 -85 3187 3139 392 320 109 28 chr10 24526952 24527446 -115789319 - L2 LINE L2 -952 2362 1829 286 260 14 14 chr10 24528456 24528529 -115788236 - MIR3 SINE MIR -4 204 132 1341 181 113 15 chr10 24529308 24529574 -115787191 - AluJo SINE Alu -20 292 1 427 308 81 12 chr10 24530509 24530681 -115786084 - MIR SINE MIR -31 231 48 2390 110 0 0 chr10 24533612 24533922 -115782843 - AluSx SINE Alu -2 310 1 182 349 28 9 chr10 24534592 24534701 -115782064 + MIR SINE MIR 35 145 -63 599 250 165 5 chr10 24534720 24534920 -115781845 + Charlie8 DNA MER1_type 34 265 -2152 280 318 70 23 chr10 24535336 24535465 -115781300 + MLT1K LTR MaLR 436 570 -18 248 267 20 96 chr10 24536182 24536328 -115780437 + HAL1 LINE L1 10 144 -2363 283 289 44 0 chr10 24536874 24536964 -115779801 + HAL1 LINE L1 808 901 -1606 246 300 120 15 chr10 24537050 24537250 -115779515 + HAL1 LINE L1 2132 2352 -155 225 296 37 65 chr10 24537261 24537369 -115779396 + L1MC1 LINE L1 5831 5935 -1873 2894 239 50 45 chr10 24537754 24538710 -115778055 + Charlie7 DNA MER1_type 213 1173 -1439 2290 216 84 52 chr10 24538738 24539544 -115777221 + Charlie7 DNA MER1_type 1575 2406 -206 360 0 0 0 chr10 24541777 24541817 -115774948 + (A)n Simple_repeat Simple_repeat 1 40 0 3294 140 32 10 chr10 24542642 24543238 -115773527 - MER4B LTR ERV1 -1 778 1 895 227 16 11 chr10 24544242 24544427 -115772338 + AluJo SINE Alu 2 187 -125 2836 222 107 23 chr10 24545373 24545400 -115771365 + L1MC4a LINE L1 6918 6941 -994 1390 251 8 51 chr10 24545400 24545791 -115770974 + MLT1A2 LTR MaLR 1 374 0 2836 222 107 23 chr10 24545791 24546594 -115770171 + L1MC4a LINE L1 6941 7935 0 428 307 74 35 chr10 24547171 24547402 -115769363 - MIR SINE MIR -8 254 15 182 211 197 13 chr10 24548137 24548213 -115768552 + L2 LINE L2 3173 3262 -10 1538 190 17 40 chr10 24549269 24549621 -115767144 + L1MC1 LINE L1 5989 6332 -1 199 311 198 34 chr10 24549992 24550230 -115766535 - L2 LINE L2 -842 2472 2196 1483 167 36 75 chr10 24550435 24550740 -115766025 - AluJb SINE Alu -9 303 11 394 190 170 13 chr10 24551100 24551225 -115765540 + MLT1H LTR MaLR 382 503 -46 21 36 0 0 chr10 24552384 24552412 -115764353 + AT_rich Low_complexity Low_complexity 1 28 0 252 0 0 0 chr10 24554201 24554229 -115762536 + (T)n Simple_repeat Simple_repeat 1 28 0 396 243 0 0 chr10 24555337 24555411 -115761354 - MIR3 SINE MIR -21 187 114 1586 171 10 36 chr10 24555622 24555926 -115760839 - AluJo SINE Alu -6 306 11 246 100 125 0 chr10 24556416 24556456 -115760309 + MLT1K LTR MaLR 523 567 -21 307 267 75 41 chr10 24557024 24557170 -115759595 - L3b LINE CR1 -154 1429 1279 887 214 52 19 chr10 24557413 24557623 -115759142 + MER58A DNA MER1_type 7 223 -1 668 316 147 22 chr10 24557625 24558122 -115758643 + L2 LINE L2 78 636 -2678 786 224 79 92 chr10 24558141 24558597 -115758168 + L2 LINE L2 2212 2661 -653 498 243 144 58 chr10 24558736 24559028 -115757737 + L2 LINE L2 2996 3312 -1 1771 184 3 16 chr10 24559450 24559766 -115756999 + AluJo SINE Alu 1 312 0 1505 149 0 108 chr10 24559873 24560208 -115756557 - AluJo SINE Alu -13 299 1 380 36 54 0 chr10 24561102 24561158 -115755607 + (CAAAA)n Simple_repeat Simple_repeat 1 59 0 312 137 0 0 chr10 24561495 24561546 -115755219 + (TG)n Simple_repeat Simple_repeat 2 52 0 220 292 0 0 chr10 24564172 24564220 -115752545 + L2 LINE L2 3137 3184 -88 1183 163 44 10 chr10 24564445 24564648 -115752117 - AluJb SINE Alu -17 295 86 437 268 13 51 chr10 24565148 24565305 -115751460 + L2 LINE L2 2202 2352 -962 202 275 104 75 chr10 24565400 24565746 -115751019 + L2 LINE L2 2622 2977 -337 2041 114 13 24 chr10 24566309 24566607 -115750158 - AluSx SINE Alu -17 295 1 1476 195 32 3 chr10 24567005 24567287 -115749478 + AluJo SINE Alu 8 297 -15 1627 96 167 0 chr10 24567821 24568084 -115748681 + AluSx SINE Alu 4 306 0 767 163 24 0 chr10 24569149 24569272 -115747493 + FLAM_C SINE Alu 3 128 -5 516 317 40 22 chr10 24570478 24570705 -115746060 + MLT1K LTR MaLR 134 364 -224 2190 101 34 0 chr10 24570716 24571014 -115745751 + AluSq SINE Alu 6 313 0 444 339 12 6 chr10 24572892 24573060 -115743705 - MIR SINE MIR -10 252 84 303 279 106 37 chr10 24573195 24573356 -115743409 + MIR3 SINE MIR 32 203 -5 1163 97 58 0 chr10 24573499 24573654 -115743111 + AluSq SINE Alu 1 164 -149 1013 114 7 0 chr10 24573848 24573988 -115742777 + AluSg/x SINE Alu 137 277 -35 260 329 34 68 chr10 24574229 24574375 -115742390 + L2 LINE L2 3122 3262 -10 2222 109 3 3 chr10 24574375 24574679 -115742086 + AluSx SINE Alu 1 304 -8 1279 209 35 14 chr10 24575017 24575299 -115741466 + L1MC1 LINE L1 6046 6333 0 1863 142 3 30 chr10 24575536 24575838 -115740927 - AluJo SINE Alu -7 305 12 229 219 229 31 chr10 24575876 24575972 -115740793 + L2 LINE L2 3199 3313 0 244 263 66 103 chr10 24577319 24577532 -115739233 + MIR SINE MIR 48 252 -10 302 73 0 0 chr10 24577647 24577688 -115739077 - L1ME4a LINE L1 -2 6119 6079 298 271 66 25 chr10 24577776 24577898 -115738867 - L1ME4a LINE L1 -56 6065 5939 347 305 71 40 chr10 24577971 24578197 -115738568 - L1ME4a LINE L1 -296 5825 5593 1284 89 0 0 chr10 24578210 24578390 -115738375 + (TA)n Simple_repeat Simple_repeat 1 180 0 302 173 0 0 chr10 24578395 24578447 -115738318 - L1MC4 LINE L1 -1339 6703 6652 317 247 136 6 chr10 24579118 24579280 -115737485 - L1ME4a LINE L1 0 6121 5939 1783 144 0 40 chr10 24579642 24579940 -115736825 - AluJo SINE Alu -26 286 1 336 200 0 0 chr10 24579975 24580055 -115736710 + (TA)n Simple_repeat Simple_repeat 1 80 0 290 294 59 0 chr10 24580084 24580186 -115736579 - L1ME4a LINE L1 -459 5662 5555 459 0 0 0 chr10 24582052 24582103 -115734662 + (TG)n Simple_repeat Simple_repeat 2 52 0 255 93 0 0 chr10 24582121 24582164 -115734601 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 2028 116 0 0 chr10 24582164 24582432 -115734333 - AluSg SINE Alu -38 272 5 342 206 0 14 chr10 24583442 24583515 -115733250 + Tigger3(Golem) DNA MER2_type 2 73 -2956 * 777 184 0 0 chr10 24583513 24583638 -115733127 + Tigger3(Golem) DNA MER2_type 2903 3027 -2 1919 139 4 0 chr10 24584285 24584559 -115732206 + AluJb SINE Alu 1 275 -37 189 196 0 0 chr10 24585334 24585380 -115731385 + (TA)n Simple_repeat Simple_repeat 2 47 0 200 368 9 9 chr10 24585559 24585665 -115731100 - MIR SINE MIR 0 262 157 270 0 0 0 chr10 24585934 24585964 -115730801 + (CA)n Simple_repeat Simple_repeat 2 31 0 28 29 0 0 chr10 24586095 24586130 -115730635 + AT_rich Low_complexity Low_complexity 1 35 0 210 323 31 8 chr10 24586500 24586630 -115730135 + C-rich Low_complexity Low_complexity 2 134 0 255 324 84 78 chr10 24588213 24588509 -115728256 + L2 LINE L2 2926 3223 -49 180 279 49 0 chr10 24588551 24588612 -115728153 - MIR SINE MIR -122 86 23 31 0 0 0 chr10 24588786 24588817 -115727948 + AT_rich Low_complexity Low_complexity 1 31 0 213 39 0 0 chr10 24589566 24589592 -115727173 + (A)n Simple_repeat Simple_repeat 1 26 0 283 241 0 0 chr10 24589645 24589699 -115727066 - L2 LINE L2 -7 3306 3253 1523 179 34 30 chr10 24589810 24589933 -115726832 + AluJo SINE Alu 1 122 -190 279 0 0 0 chr10 24589933 24589964 -115726801 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1523 179 34 30 chr10 24589964 24590137 -115726628 + AluJo SINE Alu 122 298 -14 2334 92 0 13 chr10 24590456 24590760 -115726005 + AluSg SINE Alu 1 300 -10 232 206 14 41 chr10 24591188 24591261 -115725504 + T-rich Low_complexity Low_complexity 3 73 0 476 290 81 11 chr10 24591847 24592033 -115724732 - L2 LINE L2 -20 3293 3095 432 192 175 0 chr10 24592153 24592273 -115724492 + MER20B DNA MER1_type 590 730 -53 250 253 25 0 chr10 24592607 24592686 -115724079 - MER33 DNA MER1_type -226 98 18 280 211 154 29 chr10 24592705 24592809 -115723956 + L1MC5 LINE L1 7809 7925 -36 207 0 0 0 chr10 24593662 24593685 -115723080 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 505 282 66 24 chr10 24593869 24594082 -115722683 + L1MC4a LINE L1 5635 5856 -1952 4043 168 82 50 chr10 24594157 24595246 -115721519 + L1MB7 LINE L1 5057 6184 0 24 53 0 0 chr10 24595419 24595457 -115721308 + AT_rich Low_complexity Low_complexity 1 38 0 399 254 25 8 chr10 24595468 24595590 -115721175 + L1ME4a LINE L1 5995 6118 -3 415 244 31 53 chr10 24595739 24595872 -115720893 - MLT1H1 LTR MaLR -2 563 436 611 278 66 103 chr10 24595931 24596492 -115720273 + MER34 LTR ERV1 3 542 0 1742 195 0 3 chr10 24596542 24596849 -115719916 + AluJb SINE Alu 1 306 -6 24 0 0 0 chr10 24596849 24596873 -115719892 + AT_rich Low_complexity Low_complexity 1 24 0 1490 196 81 22 chr10 24596929 24597251 -115719514 - MER58B DNA MER1_type 0 341 1 246 32 0 0 chr10 24598213 24598244 -115718521 + (CAA)n Simple_repeat Simple_repeat 2 32 0 259 271 131 8 chr10 24598535 24598657 -115718108 + MIR SINE MIR 16 152 -110 360 0 0 0 chr10 24598986 24599026 -115717739 + (CA)n Simple_repeat Simple_repeat 1 40 0 1458 181 18 78 chr10 24600563 24600894 -115715871 + AluJo SINE Alu 1 311 -1 287 362 8 16 chr10 24601314 24601441 -115715324 - L3 LINE CR1 -118 1459 1334 1406 188 41 31 chr10 24601627 24601920 -115714845 - AluJo SINE Alu -16 296 1 1125 239 68 73 chr10 24602329 24602695 -115714070 + L1MA9 LINE L1 5805 6171 -141 270 116 0 0 chr10 24602695 24602738 -115714027 + (CA)n Simple_repeat Simple_repeat 2 44 0 1125 239 68 73 chr10 24602738 24602750 -115714015 + L1MA9 LINE L1 6171 6182 -130 1157 254 111 3 chr10 24602750 24603057 -115713708 + MER2 DNA MER2_type 4 343 -1 1125 239 68 73 chr10 24603057 24603151 -115713614 + L1MA9 LINE L1 6182 6270 -42 1922 151 0 0 chr10 24603619 24603903 -115712862 - AluJo SINE Alu -28 284 1 1576 149 23 15 chr10 24604568 24604830 -115711935 - MER2 DNA MER2_type -81 264 1 762 175 67 129 chr10 24605274 24605514 -115711251 - MIR SINE MIR -35 227 3 296 285 234 0 chr10 24605823 24605981 -115710784 - MIR SINE MIR -66 196 2 3781 116 9 17 chr10 24607076 24607602 -115709163 - MER1A DNA MER1_type -1 526 5 684 274 6 6 chr10 24609124 24609303 -115707462 - MER8 DNA MER2_type -60 179 1 383 235 169 30 chr10 24609316 24609482 -115707283 + Charlie7 DNA MER1_type 13 201 -2411 1485 227 123 32 chr10 24609574 24610532 -115706233 + Charlie7 DNA MER1_type 1502 2608 -4 1307 186 140 19 chr10 24610767 24611074 -115705691 + MER2 DNA MER2_type 1 344 0 1620 185 0 34 chr10 24612584 24612882 -115703883 + AluJo SINE Alu 1 288 -24 288 53 0 0 chr10 24612898 24612936 -115703829 + (CA)n Simple_repeat Simple_repeat 2 39 0 819 230 43 25 chr10 24613468 24613703 -115703062 + L1ME LINE L1 5501 5739 -382 637 88 0 0 chr10 24613733 24613813 -115702952 - MADE1 DNA Mariner 0 80 1 241 253 28 118 chr10 24615661 24615839 -115700926 - MER91A DNA MER1_type 0 196 35 527 322 45 31 chr10 24617149 24617441 -115699324 + L1MEd LINE L1 509 804 -5315 1528 295 120 33 chr10 24617963 24618274 -115698491 - L2 LINE L2 0 3313 3031 2022 142 0 10 chr10 24618274 24618583 -115698182 + AluJo SINE Alu 1 306 -6 1528 295 120 33 chr10 24618583 24619444 -115697321 - L2 LINE L2 -282 3031 2035 220 313 0 0 chr10 24619489 24619572 -115697193 - L2 LINE L2 -1417 1897 1815 851 194 31 6 chr10 24619662 24619822 -115696943 + FRAM SINE Alu 3 166 0 738 199 161 0 chr10 24619951 24620112 -115696653 + MER3 DNA MER1_type 23 209 0 296 302 116 63 chr10 24620158 24620426 -115696339 - L2 LINE L2 -1856 1458 1177 324 0 0 0 chr10 24620577 24620613 -115696152 + (A)n Simple_repeat Simple_repeat 1 36 0 265 270 238 0 chr10 24620766 24620892 -115695873 - MER5A DNA MER1_type -2 187 32 2443 103 38 22 chr10 24620977 24621346 -115695419 - THE1C LTR MaLR 0 375 1 641 306 9 0 chr10 24621444 24621660 -115695105 + L2 LINE L2 2807 3024 -289 745 177 0 0 chr10 24622156 24622269 -115694496 + FLAM_C SINE Alu 6 118 -25 633 256 98 0 chr10 24622286 24622485 -115694280 - MIR SINE MIR 0 262 40 436 223 32 0 chr10 24623032 24623126 -115693639 + Charlie4 DNA MER1_type 1851 1947 -14 352 250 21 42 chr10 24623829 24623925 -115692840 + MER5A DNA MER1_type 16 109 -80 1373 189 4 15 chr10 24623967 24624227 -115692538 - AluJo SINE Alu -45 267 11 520 324 88 0 chr10 24624374 24624578 -115692187 - MIR SINE MIR -9 253 32 23 0 0 0 chr10 24625214 24625237 -115691528 + AT_rich Low_complexity Low_complexity 1 23 0 242 257 133 9 chr10 24626660 24626765 -115690000 - MIR3 SINE MIR -13 195 78 229 184 41 0 chr10 24627165 24627214 -115689551 + L2 LINE L2 3261 3311 -2 327 25 0 0 chr10 24628064 24628104 -115688661 + (TG)n Simple_repeat Simple_repeat 2 41 0 22 80 0 0 chr10 24628508 24628558 -115688207 + GC_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr10 24628900 24628921 -115687844 + GC_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 24629034 24629062 -115687703 + GC_rich Low_complexity Low_complexity 1 28 0 267 133 0 0 chr10 24629263 24629308 -115687457 + (GGA)n Simple_repeat Simple_repeat 1 45 0 35 41 0 0 chr10 24629564 24629613 -115687152 + GC_rich Low_complexity Low_complexity 1 49 0 4015 181 40 32 chr10 24630840 24631031 -115685734 - MER6 DNA MER2_type -27 838 650 1812 168 0 13 chr10 24631031 24631341 -115685424 - AluJb SINE Alu -6 306 1 4015 181 40 32 chr10 24631341 24631737 -115685028 - MER6 DNA MER2_type -215 650 259 437 0 19 0 chr10 24631737 24631790 -115684975 + (CA)n Simple_repeat Simple_repeat 2 55 0 4015 181 40 32 chr10 24631790 24631824 -115684941 - MER6 DNA MER2_type -606 259 227 1901 164 0 10 chr10 24631824 24632134 -115684631 + AluJo SINE Alu 5 311 -1 4015 181 40 32 chr10 24632134 24632351 -115684414 - MER6 DNA MER2_type -638 227 -9 216 196 232 0 chr10 24632677 24632733 -115684032 + MIR SINE MIR 64 133 -75 1597 158 51 41 chr10 24633010 24633302 -115683463 + AluJo SINE Alu 3 297 -15 22 35 0 0 chr10 24633630 24633659 -115683106 + AT_rich Low_complexity Low_complexity 1 29 0 701 120 10 0 chr10 24633961 24634095 -115682670 - FRAM SINE Alu 0 181 47 915 179 12 0 chr10 24634187 24634349 -115682416 + FRAM SINE Alu 12 175 -1 1813 144 7 11 chr10 24635120 24635448 -115681317 - AluJb SINE Alu 0 327 1 364 210 50 8 chr10 24636449 24636568 -115680197 + L1ME4a LINE L1 5797 5920 -201 707 188 34 0 chr10 24636612 24636729 -115680036 + AluJo SINE Alu 16 136 -176 371 208 149 32 chr10 24636756 24636910 -115679855 + L1ME4a LINE L1 5939 6110 -11 24 32 0 0 chr10 24637291 24637322 -115679443 + AT_rich Low_complexity Low_complexity 1 31 0 1701 172 30 10 chr10 24637428 24637725 -115679040 + AluJo SINE Alu 1 303 -9 301 100 0 0 chr10 24638007 24638047 -115678718 - U2 snRNA snRNA -147 41 2 582 208 0 9 chr10 24638201 24638307 -115678458 - FRAM SINE Alu -80 96 1 1008 106 0 0 chr10 24639059 24639200 -115677565 - AluSg/x SINE Alu 0 312 172 227 336 182 14 chr10 24639751 24639894 -115676871 - L2 LINE L2 -2 3270 3104 1777 160 3 29 chr10 24639966 24640272 -115676493 + AluJo SINE Alu 6 303 -9 1123 144 77 0 chr10 24640485 24640680 -115676085 - AluJo SINE Alu -102 210 1 235 322 0 23 chr10 24640692 24640779 -115675986 - L1ME LINE L1 -233 6347 6263 433 198 75 0 chr10 24641658 24641764 -115675001 + MIR SINE MIR 139 252 -10 936 241 235 3 chr10 24641773 24642092 -115674673 - L2 LINE L2 0 3313 2921 1375 156 46 83 chr10 24642141 24642443 -115674322 + AluJo SINE Alu 11 301 -11 1022 201 51 33 chr10 24642535 24642749 -115674016 + MER58A DNA MER1_type 6 223 -1 467 297 104 69 chr10 24642805 24643297 -115673468 - MLT1K LTR MaLR -13 575 67 418 284 30 22 chr10 24643453 24643587 -115673178 - L1ME LINE L1 -543 5996 5862 2325 94 0 0 chr10 24643618 24643915 -115672850 - AluSg SINE Alu -13 297 1 987 273 93 3 chr10 24643943 24644309 -115672456 - LTR16A LTR ERVL 0 450 52 2102 101 7 14 chr10 24644797 24645085 -115671680 - AluSx SINE Alu -26 286 1 272 271 96 11 chr10 24645235 24645412 -115671353 - L1ME LINE L1 -1548 5016 4825 2202 255 72 13 chr10 24645846 24646595 -115670170 - L1ME LINE L1 -1902 4662 3870 657 254 22 0 chr10 24646611 24646835 -115669930 - L1ME LINE L1 -3764 2800 2572 * 5302 172 27 23 chr10 24646816 24647734 -115669031 - L1 LINE L1 -1768 4378 3452 2383 81 3 0 chr10 24647734 24648030 -115668735 - AluY SINE Alu -14 297 1 5302 172 27 23 chr10 24648030 24648285 -115668480 - L1 LINE L1 -2694 3452 3200 526 241 8 44 chr10 24648285 24648486 -115668279 - L1MCa LINE L1 -5869 345 7 807 291 186 14 chr10 24648559 24648999 -115667766 + L2 LINE L2 2214 2729 -585 538 314 34 6 chr10 24648984 24649159 -115667606 + L2 LINE L2 2888 3067 -246 * 382 293 8 8 chr10 24649205 24649338 -115667427 - L1MEd LINE L1 -5373 746 614 368 336 97 46 chr10 24649342 24649580 -115667185 - L1MEd LINE L1 -5573 546 297 339 283 109 61 chr10 24649594 24649824 -115666941 - L1MEd LINE L1 -5876 243 3 1412 193 3 49 chr10 24649912 24650020 -115666745 + AluJo SINE Alu 20 131 -181 2114 58 4 0 chr10 24650020 24650277 -115666488 - AluY SINE Alu -18 293 36 1412 193 3 49 chr10 24650277 24650473 -115666292 + AluJo SINE Alu 131 310 -2 1461 202 21 21 chr10 24650654 24650941 -115665824 - AluJo SINE Alu -25 287 1 438 223 108 121 chr10 24650957 24651335 -115665430 + L1ME LINE L1 5442 5831 -339 23 33 0 0 chr10 24651400 24651430 -115665335 + AT_rich Low_complexity Low_complexity 1 30 0 712 232 47 117 chr10 24651432 24651915 -115664850 + MER34B LTR ERV1 1 539 -3 1631 166 48 7 chr10 24651955 24652244 -115664521 + AluJo SINE Alu 1 301 -11 248 333 0 0 chr10 24652698 24652809 -115663956 - L1M4 LINE L1 -3650 2496 2386 644 240 90 36 chr10 24652978 24653257 -115663508 - MLT1H LTR MaLR -3 546 253 2262 103 7 0 chr10 24653300 24653600 -115663165 + AluSx SINE Alu 1 302 -10 2021 129 0 0 chr10 24653614 24653935 -115662830 + AluSx SINE Alu 5 325 0 23 0 0 0 chr10 24655002 24655025 -115661740 + AT_rich Low_complexity Low_complexity 1 23 0 2356 104 0 0 chr10 24655033 24655319 -115661446 + AluY SINE Alu 1 289 -22 225 0 0 0 chr10 24655319 24655344 -115661421 + (CA)n Simple_repeat Simple_repeat 2 26 0 2356 104 0 0 chr10 24655344 24655366 -115661399 + AluY SINE Alu 288 309 -2 979 256 168 34 chr10 24655513 24655990 -115660775 - MLT1H LTR MaLR 0 549 9 2263 109 0 0 chr10 24656014 24656308 -115660457 + AluSx SINE Alu 2 295 -17 275 325 86 7 chr10 24656670 24656821 -115659944 + MIR3 SINE MIR 20 182 -26 21 36 0 0 chr10 24656919 24656947 -115659818 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 24657019 24657040 -115659725 + AT_rich Low_complexity Low_complexity 1 21 0 2082 124 0 7 chr10 24657153 24657481 -115659284 + AluSx SINE Alu 1 326 0 2358 140 40 5 chr10 24658424 24658825 -115657940 + MSTA LTR MaLR 3 417 -11 197 192 19 58 chr10 24659248 24659300 -115657465 - L2 LINE L2 -2 3311 3262 669 251 97 20 chr10 24659546 24659741 -115657024 + MLT1H LTR MaLR 1 210 -339 30155 35 1 2 chr10 24659755 24664400 -115652365 + L1PA4 LINE L1 1536 6174 0 1471 152 24 3 chr10 24664887 24665176 -115651589 - L1MA5A LINE L1 0 6297 6003 51 31 0 0 chr10 24665334 24665399 -115651366 + AT_rich Low_complexity Low_complexity 1 65 0 475 320 68 8 chr10 24665510 24665876 -115650889 + L1ME4a LINE L1 5509 5896 -225 486 0 0 0 chr10 24666211 24666265 -115650500 + (TATAA)n Simple_repeat Simple_repeat 4 57 0 497 244 115 13 chr10 24666482 24666638 -115650127 - MIR SINE MIR -56 206 35 462 261 94 20 chr10 24666991 24667156 -115649609 - MIR SINE MIR -64 144 3 253 267 11 22 chr10 24668007 24668097 -115648668 - L1MC4 LINE L1 -1340 6702 6614 561 202 9 0 chr10 24670182 24670296 -115646469 + FLAM_A SINE Alu 6 120 -22 21 0 0 0 chr10 24670304 24670325 -115646440 + AT_rich Low_complexity Low_complexity 1 21 0 1676 169 0 29 chr10 24670415 24670693 -115646072 - AluJo SINE Alu -20 292 23 362 267 52 26 chr10 24671192 24671308 -115645457 + MIR SINE MIR 95 213 -49 2154 117 10 0 chr10 24671357 24671655 -115645110 - AluSx SINE Alu -11 301 1 2130 67 0 0 chr10 24673043 24673296 -115643469 + AluY SINE Alu 45 297 -14 1734 162 0 88 chr10 24673627 24674003 -115642762 - MER2 DNA MER2_type -1 343 1 334 263 86 19 chr10 24674015 24674224 -115642541 - L1MC5 LINE L1 -102 7859 7637 225 0 0 0 chr10 24674505 24674530 -115642235 + (T)n Simple_repeat Simple_repeat 1 25 0 2306 103 3 3 chr10 24674565 24674877 -115641888 + AluSp SINE Alu 1 312 -1 1827 178 0 7 chr10 24675056 24675354 -115641411 + AluJb SINE Alu 1 296 -16 419 294 106 6 chr10 24675463 24675623 -115641142 + MIR SINE MIR 87 262 0 2343 97 3 3 chr10 24676030 24676340 -115640425 + AluY SINE Alu 1 310 -1 779 267 72 13 chr10 24676383 24676619 -115640146 - MIR SINE MIR 0 262 13 1831 175 0 7 chr10 24676753 24677050 -115639715 - AluJb SINE Alu -17 295 1 1830 141 0 61 chr10 24677859 24678000 -115638765 + AluJo SINE Alu 1 116 -196 2327 73 0 3 chr10 24678000 24678310 -115638455 + AluSc SINE Alu 1 309 0 1830 141 0 61 chr10 24678310 24678478 -115638287 + AluJo SINE Alu 116 293 -19 991 118 26 26 chr10 24678731 24678926 -115637839 + L1MA4 LINE L1 5997 6191 -109 498 99 129 0 chr10 24679030 24679131 -115637634 + L1MA4 LINE L1 6181 6294 -6 2216 131 0 0 chr10 24679157 24679469 -115637296 + AluSx SINE Alu 1 312 0 2296 114 0 0 chr10 24680779 24681087 -115635678 + AluSx SINE Alu 1 308 -4 721 284 64 8 chr10 24682806 24683042 -115633723 + MIR SINE MIR 14 262 0 243 0 0 0 chr10 24683756 24683783 -115632982 + (TG)n Simple_repeat Simple_repeat 2 28 0 1166 161 100 34 chr10 24684359 24684728 -115632037 - MSTC LTR MaLR 0 428 3 702 182 8 0 chr10 24684984 24685105 -115631660 - FLAM_A SINE Alu -10 132 11 318 325 149 5 chr10 24685150 24685338 -115631427 + MIR SINE MIR 5 219 -43 206 320 0 0 chr10 24685402 24685452 -115631313 - L2 LINE L2 -77 3236 3187 233 167 0 0 chr10 24685820 24685856 -115630909 - L2 LINE L2 -15 3298 3263 298 319 138 54 chr10 24685897 24686323 -115630442 - L2 LINE L2 -995 2319 1858 3977 74 10 21 chr10 24686344 24686421 -115630344 + L1PA10 LINE L1 5256 5332 -836 2608 30 7 3 chr10 24686421 24686724 -115630041 + AluY SINE Alu 1 304 -7 3977 74 10 21 chr10 24686724 24687343 -115629422 + L1PA10 LINE L1 5332 6008 -160 2566 105 3 3 chr10 24687462 24687835 -115628930 + L1PA10 LINE L1 5794 6166 -2 4964 136 20 20 chr10 24687835 24688056 -115628709 - L1PA16 LINE L1 -22 6144 5925 1378 197 55 24 chr10 24688056 24688345 -115628420 - AluJo SINE Alu -14 298 1 4964 136 20 20 chr10 24688345 24689049 -115627716 - L1PA16 LINE L1 -241 5925 5219 189 337 0 0 chr10 24689055 24689147 -115627618 - L2 LINE L2 -1434 1880 1789 737 246 140 5 chr10 24689251 24689458 -115627307 + MIR SINE MIR 28 262 0 891 248 53 0 chr10 24690364 24690590 -115626175 + MIR SINE MIR 12 249 -13 1703 148 8 0 chr10 24691974 24692224 -115624541 - AluSx SINE Alu -60 252 1 1828 113 126 92 chr10 24692495 24692909 -115623856 - MSTA LTR MaLR 0 428 1 21 95 0 0 chr10 24693043 24693106 -115623659 + AT_rich Low_complexity Low_complexity 1 63 0 2380 100 7 0 chr10 24693942 24694252 -115622513 + AluSx SINE Alu 1 312 0 263 250 12 25 chr10 24694773 24694853 -115621912 + L2 LINE L2 3161 3239 -74 823 167 0 0 chr10 24694876 24695002 -115621763 - FLAM_A SINE Alu -7 126 1 536 296 45 0 chr10 24695371 24695550 -115621215 + MIR SINE MIR 8 194 -68 861 126 152 5 chr10 24695716 24695907 -115620858 - MER44D DNA MER2_type -97 512 24 4966 226 104 46 chr10 24695938 24697322 -115619443 - L1MEc LINE L1 -1710 4505 3203 2382 103 0 0 chr10 24697322 24697624 -115619141 + AluSx SINE Alu 1 302 -10 4966 226 104 46 chr10 24697624 24698954 -115617811 - L1MEc LINE L1 -3012 3203 1627 711 140 0 0 chr10 24699012 24699119 -115617646 + U6 snRNA snRNA 1 107 0 340 110 137 0 chr10 24699119 24699192 -115617573 + L1MB4 LINE L1 6098 6180 0 251 205 13 26 chr10 24699391 24699469 -115617296 + (TA)n Simple_repeat Simple_repeat 1 77 0 239 159 79 0 chr10 24699485 24699548 -115617217 - L1MC4 LINE L1 -196 7846 7779 2289 98 23 0 chr10 24699572 24699877 -115616888 - AluSp SINE Alu -1 312 1 5497 147 36 14 chr10 24699882 24700749 -115616016 - L1MA8 LINE L1 0 6291 5445 2034 83 72 4 chr10 24700749 24701026 -115615739 - AluSx SINE Alu -16 296 1 5497 147 36 14 chr10 24701026 24701935 -115614830 - L1MA8 LINE L1 -846 5445 4466 1046 156 39 9 chr10 24701933 24702164 -115614601 - L1MA8 LINE L1 -2527 3619 3382 * 897 221 96 63 chr10 24702169 24702563 -115614202 - L1MC4 LINE L1 -264 7778 7372 28 79 0 0 chr10 24702581 24702644 -115614121 + AT_rich Low_complexity Low_complexity 1 63 0 1203 100 12 0 chr10 24702977 24703137 -115613628 - AluSg/x SINE Alu -18 292 131 784 248 78 70 chr10 24703259 24703730 -115613035 - L1ME3A LINE L1 -5 6165 5692 941 265 30 3 chr10 24703881 24704213 -115612552 - L1ME3A LINE L1 -569 5601 5261 396 0 0 0 chr10 24704433 24704477 -115612288 + (CA)n Simple_repeat Simple_repeat 2 45 0 255 61 0 0 chr10 24705372 24705405 -115611360 + (CA)n Simple_repeat Simple_repeat 2 34 0 2088 103 14 0 chr10 24705437 24705727 -115611038 - AluSx SINE Alu -18 294 1 387 297 69 0 chr10 24705849 24705950 -115610815 - L2 LINE L2 -11 3261 3154 1936 225 91 22 chr10 24706014 24706636 -115610129 - L1ME1 LINE L1 -323 5843 5173 759 99 8 30 chr10 24706639 24706770 -115609995 - L1MA6 LINE L1 -305 5995 5868 2038 115 7 11 chr10 24706780 24707086 -115609679 + AluSx SINE Alu 1 305 0 792 259 74 70 chr10 24707096 24707322 -115609443 - L1ME1 LINE L1 -972 5174 4950 1571 157 95 0 chr10 24707322 24707596 -115609169 + AluJb SINE Alu 5 304 -8 792 259 74 70 chr10 24707596 24707894 -115608871 - L1ME1 LINE L1 -1196 4950 4648 1586 125 42 0 chr10 24707894 24708134 -115608631 - AluSx SINE Alu -10 302 53 366 324 92 12 chr10 24708466 24708639 -115608126 - L1MC4a LINE L1 -1493 6315 6129 286 241 17 35 chr10 24708731 24708847 -115607918 - L1MC4a LINE L1 -1804 6004 5891 2397 212 36 18 chr10 24708856 24709261 -115607504 - L1ME1 LINE L1 -5 6161 5740 2301 143 20 79 chr10 24709261 24709716 -115607049 + MSTA LTR MaLR 1 428 0 2397 212 36 18 chr10 24709716 24709922 -115606843 - L1ME1 LINE L1 -426 5740 5539 1603 167 16 0 chr10 24710419 24710677 -115606088 - AluJo SINE Alu -15 297 36 180 111 0 0 chr10 24711181 24711208 -115605557 + (TATATG)n Simple_repeat Simple_repeat 3 29 0 227 257 0 14 chr10 24711215 24711289 -115605476 + L1MC4 LINE L1 6614 6686 -1356 2378 85 0 3 chr10 24711391 24711685 -115605080 + AluSg SINE Alu 1 293 -17 1845 182 7 0 chr10 24711824 24712120 -115604645 + AluJb SINE Alu 1 298 -14 500 120 0 11 chr10 24712194 24712286 -115604479 + (TCTA)n Simple_repeat Simple_repeat 4 94 0 271 146 0 36 chr10 24712689 24712744 -115604021 + MLT1H LTR MaLR 123 175 -374 240 204 37 0 chr10 24712895 24712949 -115603816 + MER63 DNA MER1_type 3 684 -152 1144 147 0 0 chr10 24712969 24713139 -115603626 + AluJo SINE Alu 126 295 -17 1410 206 43 45 chr10 24713159 24713426 -115603339 + MER63 DNA MER1_type 683 949 -113 1888 176 3 6 chr10 24713426 24713739 -115603026 - AluSx SINE Alu 0 312 1 1410 206 43 45 chr10 24713739 24713808 -115602957 + MER63 DNA MER1_type 949 1020 -42 2088 121 8 51 chr10 24713808 24714179 -115602586 + THE1A LTR MaLR 1 355 0 1410 206 43 45 chr10 24714179 24714215 -115602550 + MER63 DNA MER1_type 1020 1055 -7 709 243 7 0 chr10 24714941 24715085 -115601680 - FRAM SINE Alu -30 146 2 1855 184 7 3 chr10 24715135 24715445 -115601320 - AluJb SINE Alu -1 311 1 1906 123 0 42 chr10 24716296 24716627 -115600138 - AluSq SINE Alu 0 313 1 1534 191 0 25 chr10 24718542 24718824 -115597941 - AluJo SINE Alu -13 299 25 198 103 0 0 chr10 24721120 24721149 -115595616 + (CA)n Simple_repeat Simple_repeat 2 30 0 2787 220 34 55 chr10 24721267 24722256 -115594509 - L1ME1 LINE L1 0 6166 5210 1809 134 0 46 chr10 24722256 24722540 -115594225 - AluSx SINE Alu -7 305 35 2787 220 34 55 chr10 24722540 24722711 -115594054 - L1ME1 LINE L1 -956 5210 5037 225 157 0 59 chr10 24722728 24722779 -115593986 - L2 LINE L2 0 3313 3266 * 442 195 58 0 chr10 24722750 24722837 -115593928 - MIR SINE MIR -13 249 158 5558 116 3 14 chr10 24722907 24723372 -115593393 - L1PB1 LINE L1 -7 6144 5675 2168 132 0 13 chr10 24723372 24723683 -115593082 - AluSx SINE Alu -4 308 2 5558 116 3 14 chr10 24723683 24724257 -115592508 - L1PB1 LINE L1 -476 5675 5116 1528 179 63 60 chr10 24724550 24724981 -115591784 - MSTB1 LTR MaLR 0 432 1 2204 118 7 0 chr10 24725691 24725997 -115590768 + AluSx SINE Alu 4 311 -1 1855 154 0 20 chr10 24726756 24727055 -115589710 - AluJo SINE Alu -19 293 1 244 325 219 18 chr10 24727555 24727893 -115588872 - L2 LINE L2 -556 2758 2353 937 131 0 0 chr10 24727926 24728056 -115588709 + FLAM_C SINE Alu 1 130 -3 923 130 0 0 chr10 24729947 24730078 -115586687 - FLAM_C SINE Alu -2 131 1 513 272 62 36 chr10 24730463 24730658 -115586107 + MLT1I LTR MaLR 7 206 -203 2392 99 0 0 chr10 24730670 24730974 -115585791 - AluSx SINE Alu -8 304 1 267 186 68 0 chr10 24731042 24731101 -115585664 + MLT1I LTR MaLR 347 409 0 833 205 12 1 chr10 24731220 24731407 -115585358 - MLT1B LTR MaLR -14 374 173 751 159 0 16 chr10 24731425 24731551 -115585214 - FLAM_A SINE Alu -8 134 11 304 222 43 34 chr10 24731564 24731681 -115585084 - MLT1B LTR MaLR -213 177 60 2271 105 0 0 chr10 24731738 24732033 -115584732 - AluSc SINE Alu -14 295 1 1718 153 45 11 chr10 24732036 24732323 -115584442 - AluJb SINE Alu -15 297 1 23 68 0 0 chr10 24732805 24732849 -115583916 + AT_rich Low_complexity Low_complexity 1 44 0 225 0 0 0 chr10 24733006 24733031 -115583734 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 208 68 23 45 chr10 24733642 24733686 -115583079 + (CATTA)n Simple_repeat Simple_repeat 3 45 0 214 315 0 0 chr10 24734784 24734838 -115581927 + L2 LINE L2 3137 3190 -82 894 186 6 6 chr10 24735032 24735188 -115581577 - FRAM SINE Alu -7 159 4 2185 104 0 0 chr10 24736150 24736473 -115580292 - AluSx SINE Alu 0 327 5 459 318 108 49 chr10 24736965 24737188 -115579577 - MIR SINE MIR -25 237 2 2167 60 0 4 chr10 24737865 24738134 -115578631 + AluY SINE Alu 43 310 -1 24 53 0 0 chr10 24738557 24738595 -115578170 + AT_rich Low_complexity Low_complexity 1 38 0 263 301 68 23 chr10 24739549 24739682 -115577083 - MIR SINE MIR -6 256 118 1782 137 57 36 chr10 24739690 24740026 -115576739 - MER61A LTR ERV1 0 343 1 22930 95 35 14 chr10 24740026 24743654 -115573111 - MER61A-int LTR ERV1 0 5217 1655 1245 81 29 48 chr10 24743657 24743842 -115572923 - AluY SINE Alu -4 307 125 261 0 0 0 chr10 24743842 24743871 -115572894 + (TG)n Simple_repeat Simple_repeat 2 30 0 1245 81 29 48 chr10 24743871 24743895 -115572870 - AluY SINE Alu -186 125 102 1943 176 89 5 chr10 24744399 24744791 -115571974 + MSTB1 LTR MaLR 8 432 0 289 224 82 35 chr10 24745226 24745311 -115571454 + MLT1I LTR MaLR 278 366 -43 * 310 189 27 1 chr10 24745310 24745396 -115571369 - L1M4c LINE L1 -4906 1374 1292 1224 201 37 15 chr10 24745515 24745788 -115570977 - MLT1C LTR MaLR 0 467 189 984 167 35 48 chr10 24745815 24746042 -115570723 - MLT1C LTR MaLR -243 224 1 6104 83 11 11 chr10 24746578 24746942 -115569823 - L1PB1 LINE L1 0 6151 5788 450 0 0 0 chr10 24746942 24746992 -115569773 + (TA)n Simple_repeat Simple_repeat 1 50 0 6104 83 11 11 chr10 24746992 24747471 -115569294 - L1PB1 LINE L1 -362 5789 5308 2393 181 135 34 chr10 24747565 24748224 -115568541 + LTR48 LTR ERV1 8 766 -21 1680 285 73 48 chr10 24748238 24748904 -115567861 + L1MEc LINE L1 289 996 -5400 2130 138 0 0 chr10 24748904 24749202 -115567563 + AluSg SINE Alu 1 298 -12 1680 285 73 48 chr10 24749202 24749652 -115567113 + L1MEc LINE L1 996 1433 -4963 3863 277 39 42 chr10 24749670 24750821 -115565944 + L1PB3 LINE L1 3 1148 -5715 2114 122 66 12 chr10 24750821 24751141 -115565624 + MER1B DNA MER1_type 1 337 0 3863 277 39 42 chr10 24751141 24751637 -115565128 + L1PB3 LINE L1 1148 1644 -5219 8353 83 8 48 chr10 24751768 24753671 -115563094 + L1PA6 LINE L1 4291 6154 0 29134 70 6 2 chr10 24753679 24757406 -115559359 + L1PA4 LINE L1 7 3745 -2401 8203 45 9 2 chr10 24757406 24759123 -115557642 + L1PA4 LINE L1 4428 6151 -4 3350 216 6 11 chr10 24759123 24760045 -115556720 - L1 LINE L1 -3393 2753 1838 15399 39 1 4 chr10 24760189 24762044 -115554721 - L1P LINE L1 -811 5335 3487 14048 138 8 23 chr10 24762041 24764317 -115552448 - L1P LINE L1 -3892 2254 13 * 11577 189 26 11 chr10 24764324 24767333 -115549432 + L1PB3 LINE L1 3459 6522 -348 1991 188 88 32 chr10 24767333 24767797 -115548968 + LTR2B LTR ERV1 1 490 0 11577 189 26 11 chr10 24767797 24768151 -115548614 + L1PB3 LINE L1 6522 6869 -1 28 0 0 0 chr10 24768151 24768179 -115548586 + AT_rich Low_complexity Low_complexity 1 28 0 443 269 13 45 chr10 24769103 24769259 -115547506 + MER77 LTR ERV1 55 205 -400 958 274 40 105 chr10 24769304 24769876 -115546889 + MER21B LTR ERV1 134 668 -195 270 86 0 0 chr10 24769868 24769903 -115546862 + MER39 LTR ERV1 627 661 -46 * 2384 153 206 6 chr10 24769902 24770373 -115546392 - MER39 LTR ERV1 -15 692 128 651 214 0 126 chr10 24770379 24770594 -115546171 - MER51C LTR ERV1 0 640 453 537 154 144 0 chr10 24770926 24771030 -115545735 - MER39 LTR ERV1 -588 119 1 331 307 92 23 chr10 24771181 24771399 -115545366 - L2 LINE L2 -340 2974 2742 2058 113 137 32 chr10 24771646 24772194 -115544571 + MER4A LTR ERV1 1 664 0 537 320 31 9 chr10 24772196 24772421 -115544344 - L2 LINE L2 -904 2410 2181 2464 116 82 64 chr10 24772456 24772894 -115543871 - MER4E LTR ERV1 0 779 334 1085 83 0 7 chr10 24772895 24773039 -115543726 - MER4E LTR ERV1 -622 144 2 2605 175 40 61 chr10 24773040 24773646 -115543119 - LTR26E LTR ERV1 -29 593 1 600 161 12 125 chr10 24773809 24773934 -115542831 + Ricksha DNA DNA 2 73 -1181 1668 156 21 7 chr10 24773934 24774217 -115542548 + AluJb SINE Alu 3 289 -23 600 161 12 125 chr10 24774217 24774259 -115542506 + Ricksha DNA DNA 73 118 -1136 1579 144 12 75 chr10 24774279 24774359 -115542406 + Ricksha DNA DNA 2174 2257 -989 2408 78 14 0 chr10 24774359 24774655 -115542110 + AluY SINE Alu 1 300 -11 1579 144 12 75 chr10 24774655 24774893 -115541872 + Ricksha DNA DNA 2257 2472 -774 2070 165 41 33 chr10 24775136 24775680 -115541085 - MLT2A2 LTR ERVL 0 554 1 2112 109 20 3 chr10 24776100 24776394 -115540371 - AluSq SINE Alu -14 299 1 229 280 37 19 chr10 24777082 24777189 -115539576 + L1M4 LINE L1 5188 5296 -850 842 158 9 59 chr10 24777742 24777963 -115538802 + AluJb SINE Alu 1 210 -102 4072 119 20 31 chr10 24778335 24778696 -115538069 - L1PB1 LINE L1 -4 6147 5796 420 71 0 0 chr10 24778696 24778752 -115538013 + (CA)n Simple_repeat Simple_repeat 2 57 0 4072 119 20 31 chr10 24778752 24779090 -115537675 - L1PB1 LINE L1 -355 5796 5456 1422 235 31 52 chr10 24779449 24779538 -115537227 - L1MC/D LINE L1 -569 5790 5701 2318 179 19 27 chr10 24779538 24779951 -115536814 + MLT2D LTR ERVL 5 414 0 1422 235 31 52 chr10 24779951 24780337 -115536428 - L1MC/D LINE L1 -658 5701 5325 1813 166 80 19 chr10 24780706 24781079 -115535686 + LTR2B LTR ERV1 95 490 0 322 275 0 0 chr10 24781089 24781169 -115535596 - L1MD2 LINE L1 -260 6099 6020 787 172 48 126 chr10 24781169 24781541 -115535224 + LTR9B LTR ERV1 1 343 -301 23 86 0 0 chr10 24781718 24781776 -115534989 + GC_rich Low_complexity Low_complexity 1 58 0 5279 92 0 9 chr10 24781957 24782649 -115534116 - L1PA6 LINE L1 0 6154 5469 910 232 29 51 chr10 24782987 24783058 -115533707 - L1MC/D LINE L1 -1373 4773 4702 2169 125 0 0 chr10 24783058 24783354 -115533411 - AluSx SINE Alu -16 296 1 910 232 29 51 chr10 24783354 24783597 -115533168 - L1MC/D LINE L1 -1444 4702 4466 388 264 39 16 chr10 24783599 24783728 -115533037 + MER20B DNA MER1_type 648 779 -4 614 288 107 55 chr10 24783749 24784114 -115532651 - L2 LINE L2 -1159 2155 1772 333 248 51 8 chr10 24784263 24784380 -115532385 + L1MA10 LINE L1 6212 6333 -1 3813 144 17 8 chr10 24785545 24786532 -115530233 - L1 LINE L1 -3503 4062 3066 26 0 0 0 chr10 24788143 24788169 -115528596 + AT_rich Low_complexity Low_complexity 1 26 0 1996 132 0 0 chr10 24788210 24788490 -115528275 + AluSx SINE Alu 1 280 -32 256 286 97 65 chr10 24788692 24789154 -115527611 - L1MC/D LINE L1 -1756 4390 3914 1632 191 24 3 chr10 24790696 24790990 -115525775 + AluJo SINE Alu 1 300 -12 726 309 100 28 chr10 24791688 24792077 -115524688 + LTR33 LTR ERVL 105 521 0 251 373 60 15 chr10 24792156 24792290 -115524475 - L2 LINE L2 -7 3265 3126 192 131 16 131 chr10 24792486 24792547 -115524218 - L2 LINE L2 -188 3084 3031 618 219 39 67 chr10 24793470 24793827 -115522938 - L1MC5 LINE L1 -32 7929 7583 * 4281 69 23 0 chr10 24793825 24794387 -115522378 + L1P LINE L1 3917 4491 -1655 310 221 295 0 chr10 24794549 24794671 -115522094 + MIR SINE MIR 76 233 -29 241 340 43 0 chr10 24796789 24796883 -115519882 - L2 LINE L2 -5 3308 3211 8385 105 3 1 chr10 24797666 24798731 -115518034 - THE1-int LTR MaLR -10 1570 501 195 69 0 0 chr10 24798731 24798760 -115518005 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 8385 105 3 1 chr10 24798760 24798820 -115517945 - THE1-int LTR MaLR -1079 501 443 338 264 169 14 chr10 24800455 24800603 -115516162 + MLT1H LTR MaLR 379 549 0 289 255 41 10 chr10 24800603 24800701 -115516064 + MLT1H-int LTR MaLR 1 101 -1634 1219 187 84 8 chr10 24801352 24801614 -115515151 + AluJo SINE Alu 1 282 -30 1570 108 31 4 chr10 24801985 24802245 -115514520 - L1PBa LINE L1 -4246 2617 2351 * 2117 199 20 11 chr10 24802236 24802785 -115513980 - L1PBa LINE L1 -5073 1790 1093 512 161 0 73 chr10 24803313 24803437 -115513328 - Tigger1 DNA MER2_type 0 2418 2304 4256 178 35 70 chr10 24803438 24804516 -115512249 + L1M1 LINE L1 11 1050 -6515 238 289 12 24 chr10 24806057 24806140 -115510625 + MLT1H LTR MaLR 210 291 -258 874 158 0 46 chr10 24807561 24807713 -115509052 - AluSq/x SINE Alu -167 145 1 1613 156 22 0 chr10 24807713 24807988 -115508777 - L1M4 LINE L1 -374 5810 5530 1579 217 27 12 chr10 24807988 24808539 -115508226 - L1MCa LINE L1 -4320 2287 1538 2539 134 70 20 chr10 24809287 24809728 -115507037 + LTR32 LTR ERVL 9 471 0 198 302 72 22 chr10 24809732 24809871 -115506894 + MIR SINE MIR 105 250 -12 482 198 12 0 chr10 24810057 24810138 -115506627 - MER44D DNA MER2_type -623 82 1 * 3470 90 26 80 chr10 24810136 24810596 -115506169 + MER41A LTR ERV1 1 425 -129 1719 133 0 16 chr10 24810596 24810844 -115505921 - AluSx SINE Alu -63 249 6 3470 90 26 80 chr10 24810844 24810960 -115505805 + MER41A LTR ERV1 425 546 -8 355 271 129 14 chr10 24811274 24811414 -115505351 - MIR SINE MIR -59 203 48 940 103 7 44 chr10 24811449 24811585 -115505180 + FRAM SINE Alu 16 146 -30 2846 181 42 9 chr10 24811685 24812239 -115504526 + LTR49 LTR ERV1 1 572 -23 477 0 0 0 chr10 24812712 24812765 -115504000 + (T)n Simple_repeat Simple_repeat 1 53 0 890 117 86 12 chr10 24812778 24812941 -115503824 + LTR49 LTR ERV1 421 595 0 385 205 51 0 chr10 24812942 24813020 -115503745 + MER92B LTR ERV1 62 143 -493 1463 150 59 4 chr10 24813021 24813274 -115503491 + LTR24C LTR ERV1 1 267 -368 492 148 0 83 chr10 24813795 24813903 -115502862 - L1PA11 LINE L1 0 6174 6076 1756 128 103 36 chr10 24813906 24814264 -115502501 + LTR24C LTR ERV1 251 632 -3 584 178 9 89 chr10 24814281 24814494 -115502271 + MER92B LTR ERV1 152 347 -289 387 281 25 8 chr10 24814900 24815021 -115501744 + L2 LINE L2 3159 3281 -32 320 214 25 31 chr10 24815534 24815693 -115501072 + (TA)n Simple_repeat Simple_repeat 1 158 0 476 268 52 30 chr10 24815889 24816158 -115500607 - L1M4 LINE L1 -935 5211 4937 416 201 48 54 chr10 24816165 24816340 -115500425 - MLT1I LTR MaLR 0 409 284 512 284 113 37 chr10 24816576 24817149 -115499616 - L1M4 LINE L1 -1214 4932 4316 1549 168 9 65 chr10 24817592 24817913 -115498852 + AluJo SINE Alu 1 303 -9 262 290 170 0 chr10 24818489 24818589 -115498176 + L2 LINE L2 3138 3254 -18 306 290 65 71 chr10 24819592 24819761 -115497004 + MER5B DNA MER1_type 4 171 -7 1822 197 57 20 chr10 24820280 24820630 -115496135 + MLT1A1 LTR MaLR 1 363 -2 1619 218 11 84 chr10 24821459 24821710 -115495055 + MLT1C LTR MaLR 25 226 -241 2549 93 41 11 chr10 24821710 24822074 -115494691 - THE1C LTR MaLR 0 375 1 1619 218 11 84 chr10 24822074 24822300 -115494465 + MLT1C LTR MaLR 226 467 0 380 144 89 67 chr10 24822816 24822906 -115493859 - L1MC/D LINE L1 -545 5814 5723 1252 171 28 116 chr10 24822908 24823065 -115493700 - MER63B DNA MER1_type -731 331 222 1869 179 127 24 chr10 24823065 24823523 -115493242 + LTR22 LTR ERVK 1 505 -4 1252 171 28 116 chr10 24823523 24823728 -115493037 - MER63B DNA MER1_type -840 222 1 2202 123 40 40 chr10 24823809 24824184 -115492581 + THE1C LTR MaLR 1 375 0 261 180 0 20 chr10 24824711 24824761 -115492004 - MLT1I LTR MaLR -61 329 281 676 247 119 16 chr10 24825042 24825236 -115491529 + MIR SINE MIR 49 262 0 237 65 0 0 chr10 24825499 24825530 -115491235 + (GGA)n Simple_repeat Simple_repeat 1 31 0 1288 180 83 80 chr10 24825835 24826196 -115490569 - MLT1A2 LTR MaLR 0 374 13 207 69 0 0 chr10 24827100 24827129 -115489636 + (TTTTA)n Simple_repeat Simple_repeat 1 29 0 1251 66 42 0 chr10 24827134 24827301 -115489464 - L1PA5 LINE L1 -40 6114 5941 2658 230 41 5 chr10 24827388 24828026 -115488739 - L1ME1 LINE L1 -43 6123 5463 2052 138 0 10 chr10 24828188 24828486 -115488279 + AluSx SINE Alu 1 295 -17 1473 122 105 8 chr10 24829430 24829677 -115487088 - MSTA LTR MaLR 0 428 158 2389 173 42 18 chr10 24829815 24831323 -115485442 - L1PBa LINE L1 -4584 1620 2 287 214 143 32 chr10 24831490 24831616 -115485149 - L2 LINE L2 -774 2540 2401 845 262 46 108 chr10 24832102 24832706 -115484059 + L1MEc LINE L1 310 876 -5520 * 1312 235 49 20 chr10 24832698 24833183 -115483582 + L1MEc LINE L1 2096 2562 -3653 557 206 0 28 chr10 24833189 24833330 -115483435 + L1M4 LINE L1 4386 4522 -1624 275 142 25 0 chr10 24833329 24833383 -115483382 + L1ME LINE L1 5520 5575 -587 * 1956 120 10 10 chr10 24833403 24833694 -115483071 - AluJb SINE Alu -21 291 1 3073 117 28 9 chr10 24833697 24834158 -115482607 + Tigger1 DNA MER2_type 1799 2268 -150 852 223 7 0 chr10 24834160 24834308 -115482457 + AluJo SINE Alu 3 151 -161 559 146 10 0 chr10 24834493 24834589 -115482176 + L1M4 LINE L1 4615 4711 -1435 1553 175 0 15 chr10 24834590 24834853 -115481912 + AluJo SINE Alu 1 259 -53 270 345 82 0 chr10 24834988 24835098 -115481667 - MER91C DNA MER1_type -13 127 9 2475 202 42 48 chr10 24835477 24836095 -115480670 + L1MC4a LINE L1 7003 7616 -192 1666 199 0 17 chr10 24837203 24837499 -115479266 + AluJb SINE Alu 1 291 -21 237 396 135 5 chr10 24838439 24838646 -115478119 + L2 LINE L2 2815 3048 -224 2886 88 3 8 chr10 24838873 24839237 -115477528 - THE1B LTR MaLR 0 364 3 253 299 31 10 chr10 24840078 24840175 -115476590 - L1MC4a LINE L1 -1876 5932 5834 1884 159 10 7 chr10 24840193 24840488 -115476277 - AluSx SINE Alu -16 296 1 401 181 72 0 chr10 24841273 24841356 -115475409 + FLAM_A SINE Alu 40 128 -14 2723 111 3 19 chr10 24841500 24841870 -115474895 - THE1B LTR MaLR 0 364 1 11911 98 12 25 chr10 24841870 24843470 -115473295 - THE1B-int LTR MaLR 0 1580 1 2626 126 0 21 chr10 24843470 24843842 -115472923 - THE1B LTR MaLR 0 364 1 21 57 0 0 chr10 24844466 24844501 -115472264 + AT_rich Low_complexity Low_complexity 1 35 0 2730 103 38 20 chr10 24844731 24845157 -115471608 - MSTA LTR MaLR 0 428 4 1831 175 68 11 chr10 24846929 24847283 -115469482 - MLT1A2 LTR MaLR 0 374 1 663 124 0 0 chr10 24848080 24848177 -115468588 - FRAM SINE Alu -55 121 25 344 113 0 13 chr10 24848217 24848289 -115468476 + Alu SINE Alu 247 301 -1 213 65 0 0 chr10 24848330 24848361 -115468404 + (TG)n Simple_repeat Simple_repeat 2 32 0 2384 84 0 3 chr10 24850254 24850562 -115466203 + AluSc SINE Alu 1 307 -2 1159 158 36 10 chr10 24850855 24851051 -115465714 - AluJo SINE Alu -23 289 89 1532 208 54 96 chr10 24851342 24851576 -115465189 + L1MC5 LINE L1 6640 6882 -1095 1376 205 74 37 chr10 24851576 24851874 -115464891 + AluJo SINE Alu 1 309 -3 1532 208 54 96 chr10 24851874 24852269 -115464496 + L1MC5 LINE L1 6882 7242 -735 278 281 84 24 chr10 24852289 24852527 -115464238 + L1MC5 LINE L1 7260 7491 -551 4782 212 159 88 chr10 24852612 24852984 -115463781 - L1MC3 LINE L1 0 7785 7441 1799 170 3 0 chr10 24852984 24853267 -115463498 - AluJo SINE Alu -28 284 1 4782 212 159 88 chr10 24853267 24853395 -115463370 - L1MC3 LINE L1 -344 7441 7324 314 240 0 90 chr10 24853395 24853495 -115463270 - MLT1F1 LTR MaLR -442 125 35 4782 212 159 88 chr10 24853495 24854882 -115461883 - L1MC3 LINE L1 -461 7324 5656 6603 43 4 1 chr10 24854884 24855688 -115461077 - L1PA6 LINE L1 -5 6149 5344 6008 250 51 24 chr10 24855700 24857780 -115458985 + L1ME LINE L1 3272 5403 -758 337 272 53 105 chr10 24857900 24858128 -115458637 + MIR SINE MIR 11 226 -36 269 332 14 120 chr10 24858119 24858336 -115458429 - L2 LINE L2 -114 3158 2965 * 536 351 137 25 chr10 24858426 24859059 -115457706 - L2 LINE L2 -498 2816 2113 558 149 0 0 chr10 24859101 24859188 -115457577 + FLAM_A SINE Alu 26 112 -30 438 337 116 42 chr10 24859224 24859630 -115457135 - L2 LINE L2 -1258 2056 1621 253 294 0 35 chr10 24859877 24859962 -115456803 - LTR33A LTR ERVL -144 379 298 201 245 19 0 chr10 24860065 24860118 -115456647 + L2 LINE L2 3259 3312 -1 186 173 0 77 chr10 24861294 24861346 -115455419 - MIR SINE MIR -60 148 101 364 309 46 13 chr10 24861589 24861741 -115455024 + L1ME LINE L1 5617 5773 -348 2170 118 13 0 chr10 24861942 24862246 -115454519 + AluSx SINE Alu 1 308 -4 423 132 0 0 chr10 24862250 24862318 -115454447 + (GA)n Simple_repeat Simple_repeat 2 69 0 278 59 0 0 chr10 24862318 24862352 -115454413 + (GGAAA)n Simple_repeat Simple_repeat 2 35 0 266 178 110 0 chr10 24862562 24862635 -115454130 + L1ME4a LINE L1 6029 6109 -12 2055 109 0 11 chr10 24862746 24863031 -115453734 - AluSx SINE Alu -30 282 1 28 29 0 0 chr10 24863509 24863544 -115453221 + AT_rich Low_complexity Low_complexity 1 35 0 2259 82 10 3 chr10 24864112 24864406 -115452359 - AluSg SINE Alu -14 296 1 394 271 19 19 chr10 24864716 24864823 -115451942 - L2 LINE L2 -22 3291 3185 352 316 46 40 chr10 24866019 24866193 -115450572 + MIR SINE MIR 61 235 -27 1994 81 0 0 chr10 24866822 24867099 -115449666 + AluY SINE Alu 39 315 0 512 276 99 70 chr10 24867755 24867998 -115448767 + MIR SINE MIR 13 262 0 21 0 0 0 chr10 24868540 24868561 -115448204 + AT_rich Low_complexity Low_complexity 1 21 0 340 219 55 0 chr10 24868561 24868634 -115448131 - MER3 DNA MER1_type -131 78 2 24 67 0 0 chr10 24868854 24868899 -115447866 + AT_rich Low_complexity Low_complexity 1 45 0 238 211 88 0 chr10 24869268 24869325 -115447440 + MER3 DNA MER1_type 40 101 -108 * 741 172 18 123 chr10 24869276 24869355 -115447410 - MER3 DNA MER1_type -5 204 118 739 153 0 0 chr10 24869355 24869473 -115447292 + FLAM_C SINE Alu 1 118 -15 741 172 18 123 chr10 24869473 24869620 -115447145 - MER3 DNA MER1_type -91 118 2 1987 140 3 0 chr10 24870088 24870381 -115446384 - AluJb SINE Alu -16 296 3 25 0 0 0 chr10 24870383 24870408 -115446357 + AT_rich Low_complexity Low_complexity 1 25 0 907 314 118 24 chr10 24871074 24871901 -115444864 - L2 LINE L2 0 3313 2401 846 272 44 92 chr10 24872387 24872983 -115443782 + L1ME2 LINE L1 310 876 -5520 * 1232 237 49 20 chr10 24872975 24873460 -115443305 + L1ME2 LINE L1 2096 2562 -3653 520 201 0 29 chr10 24873468 24873607 -115443158 + L1ME2 LINE L1 4457 4591 -1624 1983 199 36 91 chr10 24873615 24873670 -115443095 + L1ME2 LINE L1 5599 5655 -578 2012 147 3 0 chr10 24873670 24873962 -115442803 - AluJo SINE Alu -15 297 5 1983 199 36 91 chr10 24873962 24874565 -115442200 + L1ME2 LINE L1 5655 6221 -12 275 216 0 0 chr10 24874721 24874772 -115441993 + L2 LINE L2 3263 3313 0 478 369 66 26 chr10 24874845 24875422 -115441343 - L2 LINE L2 -1824 1490 891 1953 228 84 20 chr10 24875738 24876296 -115440469 + L1ME3 LINE L1 5462 6055 -107 320 271 134 53 chr10 24876368 24876630 -115440135 - L1MDa LINE L1 -3934 2281 2040 23 68 0 0 chr10 24876637 24876681 -115440084 + AT_rich Low_complexity Low_complexity 1 44 0 2259 100 0 3 chr10 24876831 24877130 -115439635 + AluSx SINE Alu 1 298 -14 223 229 157 0 chr10 24877732 24877802 -115438963 - MIR3 SINE MIR -3 205 125 323 295 22 79 chr10 24878895 24879034 -115437731 - MIR SINE MIR -12 250 120 993 147 84 0 chr10 24879699 24879889 -115436876 + L1MC3 LINE L1 6892 7097 -688 246 326 0 11 chr10 24879889 24879981 -115436784 + MLT1F1 LTR MaLR 35 125 -442 408 149 68 0 chr10 24879981 24880055 -115436710 + L1MC3 LINE L1 7190 7268 -517 822 154 0 23 chr10 24880060 24880190 -115436575 + AluJb SINE Alu 3 129 -183 1788 174 0 31 chr10 24880204 24880525 -115436240 + AluJb SINE Alu 1 311 -1 2107 182 88 15 chr10 24880530 24881007 -115435758 + L1MC3 LINE L1 7264 7775 -10 6354 246 59 25 chr10 24881732 24884119 -115432646 + L1MEc LINE L1 74 2380 -3835 2499 67 0 0 chr10 24884119 24884417 -115432348 - AluY SINE Alu -13 298 1 6354 246 59 25 chr10 24884417 24885029 -115431736 + L1MEc LINE L1 2380 2970 -3245 2024 132 16 3 chr10 24885029 24885332 -115431433 + AluSc SINE Alu 1 307 -2 6354 246 59 25 chr10 24885332 24886081 -115430684 + L1MEc LINE L1 2970 3941 -2274 1592 218 68 60 chr10 24886081 24886582 -115430183 + MLT1D LTR MaLR 1 505 0 6354 246 59 25 chr10 24886582 24886899 -115429866 + L1MEc LINE L1 3941 4246 -1969 326 168 253 0 chr10 24886979 24887074 -115429691 - L1ME2 LINE L1 -274 5890 5772 1580 200 53 43 chr10 24887075 24887501 -115429264 - L1ME2 LINE L1 -543 5623 5197 294 215 66 33 chr10 24887497 24887557 -115429208 - L1MC2 LINE L1 -1 6343 6286 * 1960 142 0 40 chr10 24887557 24887881 -115428884 + AluJb SINE Alu 1 311 -1 294 215 66 33 chr10 24887881 24887941 -115428824 - L1MC2 LINE L1 -58 6286 6219 2773 171 37 4 chr10 24887957 24888448 -115428317 - MLT2B2 LTR ERVL 0 515 9 480 312 139 14 chr10 24888517 24888812 -115427953 - L2 LINE L2 -15 3298 2967 1838 106 8 0 chr10 24889547 24889792 -115426973 + AluSx SINE Alu 47 293 -19 274 200 22 60 chr10 24889860 24890045 -115426720 + (TATAA)n Simple_repeat Simple_repeat 1 178 0 726 216 12 6 chr10 24890733 24890895 -115425870 - MIR SINE MIR 0 262 100 1055 151 0 35 chr10 24891080 24891252 -115425513 + AluJb SINE Alu 127 292 -20 356 170 17 2 chr10 24891820 24891889 -115424876 + MIR SINE MIR 112 181 -27 2135 115 0 7 chr10 24891900 24892204 -115424561 - AluSx SINE Alu 0 302 1 213 39 0 0 chr10 24893324 24893350 -115423415 + (CA)n Simple_repeat Simple_repeat 2 27 0 1651 169 142 17 chr10 24893871 24894286 -115422479 - MLT1C LTR MaLR 0 467 1 296 280 93 0 chr10 24896138 24896245 -115420520 - MIR SINE MIR -77 185 69 284 277 39 54 chr10 24896418 24896548 -115420217 - MIR SINE MIR -63 199 72 1155 244 29 59 chr10 24896662 24896791 -115419974 + L1M4 LINE L1 4062 4193 -1953 2420 88 0 0 chr10 24896791 24897069 -115419696 + AluSc SINE Alu 1 281 -28 288 0 0 0 chr10 24897069 24897101 -115419664 + (CA)n Simple_repeat Simple_repeat 1 32 0 2420 88 0 0 chr10 24897101 24897128 -115419637 + AluSc SINE Alu 280 306 -3 1155 244 29 59 chr10 24897128 24897440 -115419325 + L1M4 LINE L1 4193 4490 -1656 1438 273 120 54 chr10 24897520 24897618 -115419147 - L1ME LINE L1 -4141 2120 2030 2144 117 3 7 chr10 24897618 24897918 -115418847 - AluSx SINE Alu -13 299 1 1438 273 120 54 chr10 24897918 24899382 -115417383 - L1ME LINE L1 -4231 2030 428 408 223 11 0 chr10 24899604 24899698 -115417067 - L1ME LINE L1 -5606 464 370 237 204 0 0 chr10 24899710 24899754 -115417011 - MLT2D LTR ERVL -8 445 402 1849 124 55 66 chr10 24899778 24900157 -115416608 - THE1C LTR MaLR 0 375 1 1615 191 29 3 chr10 24900193 24900507 -115416258 - MLT2D LTR ERVL -62 352 31 742 219 73 0 chr10 24900516 24900694 -115416071 - ERVL-D LTR ERVL 0 5764 5574 * 1593 108 60 4 chr10 24900691 24900942 -115415823 - ERVL-D LTR ERVL -975 4789 4525 1765 156 45 7 chr10 24901677 24901966 -115414799 - AluJb SINE Alu -12 300 1 536 343 66 52 chr10 24903229 24904025 -115412740 - L2 LINE L2 -102 3170 2375 4454 179 36 9 chr10 24904056 24904612 -115412153 - L1MB3 LINE L1 -1 6182 5642 2224 121 7 0 chr10 24904612 24904918 -115411847 - AluSx SINE Alu -4 308 1 4454 179 36 9 chr10 24904918 24905608 -115411157 - L1MB3 LINE L1 -541 5642 4903 198 343 14 14 chr10 24905613 24905686 -115411079 + MIR3 SINE MIR 130 202 -6 1719 160 0 18 chr10 24906189 24906471 -115410294 + AluJo SINE Alu 1 277 -35 378 0 0 0 chr10 24906471 24906513 -115410252 + (TAA)n Simple_repeat Simple_repeat 1 42 0 2391 94 0 0 chr10 24906927 24907235 -115409530 - AluY SINE Alu -3 308 1 405 291 39 22 chr10 24907361 24907543 -115409222 - LTR33 LTR ERVL -2 519 335 2044 131 3 0 chr10 24907806 24908120 -115408645 - AluSx SINE Alu 0 315 1 419 347 107 44 chr10 24908150 24908457 -115408308 - HAL1b LINE L1 -577 771 485 2076 117 0 32 chr10 24908457 24908766 -115407999 + AluSq SINE Alu 4 302 -11 419 347 107 44 chr10 24908766 24909075 -115407690 - HAL1b LINE L1 -863 485 116 355 349 102 29 chr10 24909375 24909926 -115406839 + L2 LINE L2 1706 2296 -1018 2026 147 44 6 chr10 24911363 24911724 -115405041 - THE1C LTR MaLR 0 375 1 22 0 0 0 chr10 24912630 24912652 -115404113 + AT_rich Low_complexity Low_complexity 1 22 0 31 0 0 0 chr10 24913915 24913946 -115402819 + AT_rich Low_complexity Low_complexity 1 31 0 189 315 81 36 chr10 24914107 24914218 -115402547 + L3 LINE CR1 1060 1175 -402 1918 114 0 11 chr10 24915283 24915555 -115401210 + AluSx SINE Alu 10 278 -34 189 0 0 0 chr10 24915558 24915579 -115401186 + (CAAA)n Simple_repeat Simple_repeat 1 21 0 2420 88 0 0 chr10 24916236 24916543 -115400222 - AluY SINE Alu -4 307 1 385 297 39 22 chr10 24916669 24916851 -115399914 - LTR33 LTR ERVL -2 519 335 2044 131 3 0 chr10 24917114 24917428 -115399337 - AluSx SINE Alu 0 315 1 419 347 107 44 chr10 24917458 24917765 -115399000 - HAL1b LINE L1 -577 771 485 2007 119 0 35 chr10 24917765 24918075 -115398690 + AluSq SINE Alu 4 302 -11 419 347 107 44 chr10 24918075 24918384 -115398381 - HAL1b LINE L1 -863 485 116 355 349 102 29 chr10 24918684 24919235 -115397530 + L2 LINE L2 1706 2296 -1018 2026 147 44 6 chr10 24920672 24921033 -115395732 - THE1C LTR MaLR 0 375 1 22 0 0 0 chr10 24921940 24921962 -115394803 + AT_rich Low_complexity Low_complexity 1 22 0 31 0 0 0 chr10 24923226 24923257 -115393508 + AT_rich Low_complexity Low_complexity 1 31 0 189 315 81 36 chr10 24923418 24923529 -115393236 + L3 LINE CR1 1060 1175 -402 1878 114 0 15 chr10 24924594 24924867 -115391898 + AluSx SINE Alu 10 278 -34 189 0 0 0 chr10 24924870 24924891 -115391874 + (CAAA)n Simple_repeat Simple_repeat 1 21 0 331 308 8 17 chr10 24925012 24925129 -115391636 - MIR SINE MIR -127 135 20 27 87 0 0 chr10 24926951 24927020 -115389745 + AT_rich Low_complexity Low_complexity 1 69 0 1727 156 0 63 chr10 24927373 24927675 -115389090 - AluJo SINE Alu -21 291 9 388 275 34 143 chr10 24928312 24928726 -115388039 + L2 LINE L2 2921 3289 -24 2099 128 0 13 chr10 24928764 24929124 -115387641 + AluSx SINE Alu 1 312 0 414 261 79 36 chr10 24933001 24933166 -115383599 - MIR SINE MIR -15 247 76 184 200 31 0 chr10 24933458 24933523 -115383242 + CT-rich Low_complexity Low_complexity 2 68 0 197 87 0 65 chr10 24933928 24933974 -115382791 + (T)n Simple_repeat Simple_repeat 1 43 0 301 318 94 60 chr10 24933990 24934257 -115382508 - L2 LINE L2 -21 3292 3017 228 326 14 56 chr10 24936200 24936344 -115380421 - L2 LINE L2 -208 3064 2927 202 288 65 39 chr10 24936634 24936906 -115379859 - L2 LINE L2 -212 3060 2776 863 154 0 15 chr10 24936911 24937047 -115379718 + AluJo SINE Alu 1 134 -178 447 309 134 4 chr10 24937079 24937325 -115379440 - L2 LINE L2 -541 2773 2496 21 57 0 0 chr10 24938617 24938652 -115378113 + AT_rich Low_complexity Low_complexity 1 35 0 433 113 0 0 chr10 24939776 24939847 -115376918 + 5S rRNA rRNA 42 112 -9 23 0 0 0 chr10 24940310 24940333 -115376432 + AT_rich Low_complexity Low_complexity 1 23 0 666 252 102 39 chr10 24941073 24941406 -115375359 + L1ME3A LINE L1 5609 5962 -208 762 144 0 8 chr10 24941761 24941886 -115374879 + FLAM_C SINE Alu 1 124 -19 661 197 167 31 chr10 24942029 24942274 -115374491 - MIR SINE MIR 0 262 3 224 391 76 0 chr10 24942384 24942476 -115374289 - L2 LINE L2 -19 3253 3155 437 356 98 32 chr10 24942761 24943076 -115373689 + L2 LINE L2 2937 3272 0 1034 194 246 6 chr10 24943686 24944027 -115372738 - MLT1D LTR MaLR 0 505 83 353 22 22 0 chr10 24945035 24945081 -115371684 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 1786 151 95 0 chr10 24945084 24945369 -115371396 - AluSx SINE Alu 0 312 1 928 170 23 47 chr10 24946177 24946348 -115370417 + FAM SINE Alu 4 170 -5 1525 147 12 16 chr10 24946375 24946620 -115370145 + AluJo SINE Alu 15 258 -54 2488 50 13 0 chr10 24947430 24947729 -115369036 + AluY SINE Alu 1 303 -8 584 265 59 116 chr10 24947906 24948078 -115368687 - L2 LINE L2 -4 3309 3129 2275 111 3 0 chr10 24948078 24948384 -115368381 + AluSx SINE Alu 1 307 -5 584 265 59 116 chr10 24948384 24948853 -115367912 - L2 LINE L2 -184 3129 2685 211 264 0 57 chr10 24948912 24948965 -115367800 - L3b LINE CR1 -21 1562 1513 2265 65 34 14 chr10 24949921 24950213 -115366552 + AluSc SINE Alu 1 298 -11 2071 142 0 0 chr10 24950325 24950620 -115366145 + AluJb SINE Alu 9 303 -9 24 32 0 0 chr10 24950726 24950757 -115366008 + AT_rich Low_complexity Low_complexity 1 31 0 2123 101 0 24 chr10 24951982 24952292 -115364473 - AluSg SINE Alu 0 303 1 767 153 6 17 chr10 24952623 24952800 -115363965 + CT-rich Low_complexity Low_complexity 3 177 0 758 196 0 6 chr10 24952844 24953012 -115363753 + CT-rich Low_complexity Low_complexity 1 167 0 798 217 0 10 chr10 24953051 24953553 -115363212 + CT-rich Low_complexity Low_complexity 1 496 0 306 272 26 79 chr10 24953605 24953719 -115363046 + L2 LINE L2 3140 3247 -25 731 292 5 0 chr10 24953782 24953967 -115362798 + MIR SINE MIR 71 256 -6 274 312 78 81 chr10 24954934 24955387 -115361378 + L2 LINE L2 2246 2698 -616 2019 133 3 32 chr10 24955387 24955696 -115361069 - AluSx SINE Alu -12 300 1 274 312 78 81 chr10 24955696 24955797 -115360968 + L2 LINE L2 2698 2798 -516 1295 143 53 73 chr10 24955955 24956256 -115360509 - L1MA9 LINE L1 0 6312 6018 327 333 37 30 chr10 24956295 24956430 -115360335 + L2 LINE L2 3127 3262 -10 23 33 0 0 chr10 24956430 24956460 -115360305 + AT_rich Low_complexity Low_complexity 1 30 0 239 309 98 16 chr10 24956693 24956816 -115359949 + MIR SINE MIR 113 245 -17 3499 63 4 35 chr10 24957021 24957481 -115359284 + L1PA13 LINE L1 5716 6161 -2 745 158 72 0 chr10 24958354 24958493 -115358272 - L2 LINE L2 0 3313 3165 21 0 0 0 chr10 24959566 24959587 -115357178 + AT_rich Low_complexity Low_complexity 1 21 0 2074 130 0 3 chr10 24959980 24960291 -115356474 + AluSx SINE Alu 1 310 0 2423 86 0 0 chr10 24961012 24961314 -115355451 - AluY SINE Alu -9 302 1 243 259 25 0 chr10 24961804 24961885 -115354880 - LTR37A LTR ERV1 0 426 344 3372 194 79 19 chr10 24961896 24962028 -115354737 - L1ME1 LINE L1 -50 6116 5993 1627 150 49 59 chr10 24962028 24962335 -115354430 - AluJb SINE Alu 0 312 9 3372 194 79 19 chr10 24962335 24962613 -115354152 - L1ME1 LINE L1 -173 5993 5733 2006 110 7 28 chr10 24962613 24962933 -115353832 - AluSx SINE Alu 0 314 1 3372 194 79 19 chr10 24962933 24963295 -115353470 - L1ME1 LINE L1 -433 5733 5296 * 5983 121 7 23 chr10 24963291 24964324 -115352441 - L1PA16 LINE L1 0 6166 5152 922 250 18 0 chr10 24964312 24964540 -115352225 - L1ME1 LINE L1 -836 5310 5079 * 887 239 17 4 chr10 24964610 24964840 -115351925 - L1ME1 LINE L1 -1066 5080 4848 5620 236 42 40 chr10 24964855 24966892 -115349873 + L1MDb LINE L1 23 2054 -4352 366 23 0 0 chr10 24966892 24966935 -115349830 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 5620 236 42 40 chr10 24966935 24969170 -115347595 + L1MDb LINE L1 2054 4318 -2088 718 198 120 0 chr10 24969168 24969335 -115347430 - L1MD2 LINE L1 -130 6229 6043 * 2500 227 26 41 chr10 24969338 24970070 -115346695 - L1M4 LINE L1 -1216 4930 4210 1518 198 98 97 chr10 24970069 24970357 -115346408 - L1MDb LINE L1 -4820 1260 974 * 1700 171 3 10 chr10 24970357 24970655 -115346110 + AluJo SINE Alu 3 298 -14 1518 198 98 97 chr10 24970655 24971218 -115345547 - L1MDb LINE L1 -5106 974 445 310 289 142 64 chr10 24971235 24971453 -115345312 - L1MDb LINE L1 -5564 506 272 311 303 34 25 chr10 24971836 24971955 -115344810 - L1MDb LINE L1 -5935 135 16 984 183 65 134 chr10 24971955 24972402 -115344363 - LTR37B LTR ERV1 -50 418 3 254 200 0 55 chr10 24972499 24972554 -115344211 - L2 LINE L2 -8 3305 3254 905 249 6 6 chr10 24972709 24972886 -115343879 + MER8 DNA MER2_type 1 177 -62 260 172 121 17 chr10 24972864 24972922 -115343843 + MER2 DNA MER2_type 282 345 0 * 447 165 0 25 chr10 24972922 24972994 -115343771 - Tigger2 DNA MER2_type -2648 70 1 210 264 19 0 chr10 24973089 24973142 -115343623 + GA-rich Low_complexity Low_complexity 2 55 0 755 197 0 15 chr10 24974467 24974599 -115342166 + FLAM_C SINE Alu 2 131 -12 35 24 0 0 chr10 24974842 24974884 -115341881 + AT_rich Low_complexity Low_complexity 1 42 0 225 261 0 0 chr10 24975636 24975724 -115341041 + (TA)n Simple_repeat Simple_repeat 1 88 0 244 359 56 21 chr10 24975758 24976096 -115340669 - L2 LINE L2 -4 3268 2845 212 266 169 32 chr10 24976159 24976283 -115340482 - L2 LINE L2 -562 2752 2612 196 275 53 61 chr10 24976313 24976444 -115340321 - L2 LINE L2 -822 2492 2363 181 254 0 55 chr10 24976461 24976516 -115340249 + L2 LINE L2 3221 3272 0 267 278 124 10 chr10 24976938 24977035 -115339730 - MIR SINE MIR -61 147 40 371 346 57 38 chr10 24977248 24977478 -115339287 + L2 LINE L2 2092 2329 -985 2088 141 7 82 chr10 24977478 24977882 -115338883 - MLT1A2 LTR MaLR 0 374 1 371 346 57 38 chr10 24977882 24977914 -115338851 + L2 LINE L2 2329 2359 -955 209 338 0 0 chr10 24978375 24978443 -115338322 + L2 LINE L2 1371 1438 -1876 377 264 139 21 chr10 24978473 24978617 -115338148 + MIR SINE MIR 18 178 -84 22 0 0 0 chr10 24978666 24978688 -115338077 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 24978862 24978883 -115337882 + AT_rich Low_complexity Low_complexity 1 21 0 445 320 64 25 chr10 24978965 24979168 -115337597 - MIR SINE MIR -41 221 11 27 62 0 0 chr10 24980672 24980720 -115336045 + AT_rich Low_complexity Low_complexity 1 48 0 21 95 0 0 chr10 24980955 24981018 -115335747 + AT_rich Low_complexity Low_complexity 1 63 0 501 265 124 50 chr10 24981785 24982327 -115334438 + L1M4 LINE L1 4352 4927 -1219 351 252 78 13 chr10 24982595 24982720 -115334045 - MLT1J1 LTR MaLR -39 370 232 680 152 19 9 chr10 24983302 24983407 -115333358 - AluJb SINE Alu -24 288 183 268 81 0 0 chr10 24983408 24983445 -115333320 + MADE1 DNA Mariner 15 51 -29 2369 101 0 0 chr10 24983582 24983890 -115332875 - AluSx SINE Alu -4 308 1 422 267 37 7 chr10 24984427 24984562 -115332203 + MIR SINE MIR 19 157 -105 * 775 259 103 13 chr10 24984552 24984784 -115331981 - MIR SINE MIR 0 262 10 199 294 0 0 chr10 24984778 24984829 -115331936 + MIR SINE MIR 156 206 -56 * 345 82 0 0 chr10 24984856 24984905 -115331860 + (TG)n Simple_repeat Simple_repeat 2 50 0 637 217 82 9 chr10 24985003 24985183 -115331582 - MER58B DNA MER1_type -19 322 1 2101 185 89 9 chr10 24985441 24985727 -115331038 - LTR40b LTR ERVL 0 462 129 2286 99 10 0 chr10 24985727 24986020 -115330745 + AluSp SINE Alu 1 296 -17 2101 185 89 9 chr10 24986020 24986161 -115330604 - LTR40b LTR ERVL -333 129 1 209 218 51 0 chr10 24986257 24986335 -115330430 + (TA)n Simple_repeat Simple_repeat 1 82 0 572 248 130 39 chr10 24986649 24986846 -115329919 + MIR SINE MIR 11 233 -29 1951 184 82 10 chr10 24986846 24987247 -115329518 - MER95 LTR ERV -1 430 1 572 248 130 39 chr10 24987247 24987279 -115329486 + MIR SINE MIR 233 261 -1 2102 124 3 3 chr10 24987561 24987859 -115328906 - AluSx SINE Alu -13 299 2 2134 130 0 0 chr10 24988100 24988400 -115328365 - AluSx SINE Alu -12 300 1 320 209 204 57 chr10 24990086 24990314 -115326451 - MER34C LTR ERV1 -21 739 385 259 216 20 0 chr10 24990482 24990533 -115326232 - MER34 LTR ERV1 -467 75 24 402 21 0 0 chr10 24990670 24990717 -115326048 + (TA)n Simple_repeat Simple_repeat 1 47 0 1496 183 10 29 chr10 24990724 24991030 -115325735 + AluJo SINE Alu 1 300 -12 2240 113 3 3 chr10 24991065 24991375 -115325390 + AluSq SINE Alu 1 310 -3 587 307 58 0 chr10 24991920 24992109 -115324656 + MIR SINE MIR 52 251 -11 732 223 84 37 chr10 24992343 24992675 -115324090 + LTR35 LTR ERV1 350 618 0 1075 206 30 11 chr10 24992705 24992972 -115323793 + L1MA4 LINE L1 6029 6300 0 4592 143 45 35 chr10 24993098 24993381 -115323384 + LTR39 LTR ERV1 1 280 -503 2051 96 0 53 chr10 24993381 24993709 -115323056 + AluSx SINE Alu 1 312 0 4592 143 45 35 chr10 24993709 24994199 -115322566 + LTR39 LTR ERV1 280 783 0 909 247 58 55 chr10 24994284 24994434 -115322331 + MER39 LTR ERV1 1 149 -393 4137 156 11 0 chr10 24994434 24995062 -115321703 + MER41B LTR ERV1 1 635 0 909 247 58 55 chr10 24995062 24995416 -115321349 + MER39 LTR ERV1 149 539 -3 327 174 101 64 chr10 24996945 24997054 -115319711 - L1ME4a LINE L1 -19 6102 5990 4621 81 0 0 chr10 24997106 24997660 -115319105 - MER41A LTR ERV1 0 554 1 246 32 0 0 chr10 24998350 24998381 -115318384 + (T)n Simple_repeat Simple_repeat 1 31 0 974 210 49 38 chr10 24998922 24999189 -115317576 - MER39 LTR ERV1 0 707 438 1519 121 58 4 chr10 24999191 24999431 -115317334 - LTR45 LTR ERV1 0 525 273 2099 166 44 30 chr10 24999431 24999977 -115316788 - MLT2A2 LTR ERVL 0 554 1 1415 121 86 93 chr10 24999977 25000256 -115316509 - LTR45 LTR ERV1 -248 277 1 262 279 133 62 chr10 25000256 25000468 -115316297 - MER34 LTR ERV1 -268 439 2 22 80 0 0 chr10 25001217 25001267 -115315498 + AT_rich Low_complexity Low_complexity 1 50 0 421 254 52 46 chr10 25002070 25002243 -115314522 - MIR3 SINE MIR -1 207 34 2933 201 16 67 chr10 25002310 25002564 -115314201 + LTR8 LTR ERV1 16 282 -409 2542 139 55 0 chr10 25002564 25002968 -115313797 - MSTB LTR MaLR 0 426 1 2933 201 16 67 chr10 25002968 25003410 -115313355 + LTR8 LTR ERV1 282 676 -15 199 229 42 0 chr10 25003686 25003734 -115313031 + MIR3 SINE MIR 109 158 -50 1085 215 81 63 chr10 25004069 25004535 -115312230 - MER39 LTR ERV1 0 707 42 2304 109 3 3 chr10 25004535 25004847 -115311918 + AluSx SINE Alu 1 312 0 257 246 0 0 chr10 25004860 25004917 -115311848 - MER34 LTR ERV1 -485 57 1 1475 168 0 93 chr10 25004969 25005142 -115311623 - AluJo SINE Alu -21 291 160 2244 115 0 31 chr10 25005142 25005464 -115311301 - AluSx SINE Alu 0 312 1 1475 168 0 93 chr10 25005464 25005611 -115311154 - AluJo SINE Alu -152 160 1 212 256 0 0 chr10 25006457 25006500 -115310265 + L2 LINE L2 3255 3297 -16 1880 113 6 77 chr10 25007381 25007692 -115309073 - AluSx SINE Alu -23 289 1 2339 99 0 0 chr10 25008981 25009285 -115307480 - AluSg SINE Alu -6 304 1 762 182 56 10 chr10 25009292 25009490 -115307275 + Charlie1 DNA MER1_type 2550 2756 -5 198 274 0 20 chr10 25009511 25009562 -115307203 + MIR SINE MIR 30 79 -129 382 313 171 9 chr10 25009585 25009796 -115306969 + MIR SINE MIR 18 262 0 1887 153 0 19 chr10 25009881 25010188 -115306577 - AluJb SINE Alu -11 301 1 235 247 21 46 chr10 25010565 25010692 -115306073 + CT-rich Low_complexity Low_complexity 1 123 0 1704 159 0 48 chr10 25011291 25011586 -115305179 + AluJo SINE Alu 11 291 -21 814 92 0 0 chr10 25012591 25012689 -115304076 - AluSg/x SINE Alu -21 288 191 990 166 6 0 chr10 25012715 25012872 -115303893 + AluSx SINE Alu 1 158 -154 1330 129 15 5 chr10 25012973 25013199 -115303566 + AluY SINE Alu 80 307 0 1582 179 32 0 chr10 25013259 25013567 -115303198 + MER33 DNA MER1_type 3 320 -4 1751 172 69 0 chr10 25013853 25014144 -115302621 + AluJo SINE Alu 1 311 -1 1414 163 61 30 chr10 25014923 25015187 -115301578 - AluJo SINE Alu -5 307 36 2072 231 4 41 chr10 25015835 25016325 -115300440 + MLT2B1 LTR ERVL 7 478 -42 208 135 0 0 chr10 25017371 25017408 -115299357 + (A)n Simple_repeat Simple_repeat 1 37 0 495 308 97 0 chr10 25017549 25017786 -115298979 + MIR SINE MIR 3 262 0 609 293 50 22 chr10 25017986 25018208 -115298557 + MIR SINE MIR 28 255 -7 26861 34 1 1 chr10 25019244 25023228 -115293537 - L1PA4 LINE L1 0 6155 2172 2049 156 0 0 chr10 25023389 25023697 -115293068 - AluSx SINE Alu -4 308 1 1371 203 13 41 chr10 25023700 25024015 -115292750 - AluJo SINE Alu -2 310 5 1454 198 4 14 chr10 25024397 25024675 -115292090 + AluJo SINE Alu 22 296 -16 1980 135 42 0 chr10 25024886 25025175 -115291590 - AluSx SINE Alu -11 301 1 258 305 117 16 chr10 25025750 25025878 -115290887 + L3b LINE CR1 1103 1243 -340 234 128 0 0 chr10 25025902 25025941 -115290824 + (TATG)n Simple_repeat Simple_repeat 4 42 0 4202 165 23 1 chr10 25026240 25026923 -115289842 + MER44D DNA MER2_type 6 703 -2 557 325 109 43 chr10 25027002 25027895 -115288870 + L2 LINE L2 290 1255 -2059 2251 109 0 10 chr10 25027895 25028197 -115288568 + AluSx SINE Alu 1 299 -13 557 325 109 43 chr10 25028197 25028284 -115288481 + L2 LINE L2 1255 1335 -1979 620 336 55 24 chr10 25028600 25029145 -115287620 + L2 LINE L2 2226 2787 -527 2863 118 41 51 chr10 25029289 25029599 -115287166 - LTR45B LTR ERV1 0 489 184 1848 104 112 0 chr10 25029599 25029859 -115286906 - AluSg SINE Alu -19 291 3 2863 118 41 51 chr10 25029859 25030038 -115286727 - LTR45B LTR ERV1 -305 184 5 333 333 13 31 chr10 25030095 25030254 -115286511 + L2 LINE L2 3117 3272 0 2101 112 14 10 chr10 25030369 25030663 -115286102 + AluSx SINE Alu 1 295 -17 197 33 33 0 chr10 25032752 25032782 -115283983 + (TA)n Simple_repeat Simple_repeat 2 32 0 2187 118 0 0 chr10 25032782 25033069 -115283696 - AluSx SINE Alu -25 287 1 2015 108 105 31 chr10 25033139 25033490 -115283275 + MER51B LTR ERV1 1 377 0 1846 148 25 3 chr10 25033848 25034132 -115282633 + AluJo SINE Alu 5 294 -18 180 0 0 0 chr10 25034216 25034236 -115282529 + (T)n Simple_repeat Simple_repeat 1 20 0 231 133 0 0 chr10 25034816 25034861 -115281904 + (TTCA)n Simple_repeat Simple_repeat 4 48 0 189 0 0 0 chr10 25035260 25035281 -115281484 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 761 262 102 86 chr10 25035753 25036173 -115280592 + LTR16A LTR ERVL 24 450 0 21 0 0 0 chr10 25036238 25036259 -115280506 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 25036441 25036462 -115280303 + AT_rich Low_complexity Low_complexity 1 21 0 425 258 126 26 chr10 25036853 25037124 -115279641 + L1ME4a LINE L1 5711 6008 -113 22 0 0 0 chr10 25037170 25037192 -115279573 + AT_rich Low_complexity Low_complexity 1 22 0 1117 141 0 0 chr10 25037246 25037409 -115279356 - AluSg/x SINE Alu -7 303 141 313 162 0 0 chr10 25037409 25037459 -115279306 - AluSp SINE Alu -129 174 133 2241 95 3 7 chr10 25037738 25038032 -115278733 + AluSg SINE Alu 1 293 -17 25 75 0 0 chr10 25038217 25038270 -115278495 + AT_rich Low_complexity Low_complexity 1 53 0 408 328 33 0 chr10 25038769 25038949 -115277816 + MER5A DNA MER1_type 4 189 0 1606 122 48 71 chr10 25039426 25039721 -115277044 + AluJb SINE Alu 4 291 -21 308 323 10 10 chr10 25040279 25040378 -115276387 + L2 LINE L2 3144 3242 -30 2285 114 0 19 chr10 25040390 25040706 -115276059 - AluSx SINE Alu -2 310 1 276 265 15 0 chr10 25041515 25041583 -115275182 - L2 LINE L2 0 3313 3245 1821 146 36 4 chr10 25042114 25042388 -115274377 + AluSx SINE Alu 4 286 -26 2321 45 69 3 chr10 25042586 25042876 -115273889 - AluY SINE Alu -2 309 1 248 221 73 0 chr10 25043471 25043539 -115273226 - L2 LINE L2 0 3272 3200 2187 111 6 16 chr10 25043701 25044016 -115272749 - AluSx SINE Alu 0 312 1 181 233 100 33 chr10 25044937 25044997 -115271768 + L2 LINE L2 3201 3264 -8 2408 81 10 0 chr10 25045242 25045538 -115271227 + AluY SINE Alu 1 299 -12 270 0 0 0 chr10 25045541 25045571 -115271194 + (TA)n Simple_repeat Simple_repeat 1 30 0 * 369 0 0 0 chr10 25045570 25045611 -115271154 + (GA)n Simple_repeat Simple_repeat 2 42 0 785 181 0 0 chr10 25045689 25045822 -115270943 - FLAM_C SINE Alu 0 133 1 186 103 0 0 chr10 25046607 25046636 -115270129 + (A)n Simple_repeat Simple_repeat 1 29 0 950 121 8 0 chr10 25047752 25047884 -115268881 + AluSq/x SINE Alu 1 133 -180 28 0 0 0 chr10 25047884 25047912 -115268853 + AT_rich Low_complexity Low_complexity 1 28 0 1947 134 3 74 chr10 25048417 25048753 -115268012 + AluSx SINE Alu 1 312 0 214 209 0 0 chr10 25049414 25049457 -115267308 + L2 LINE L2 3263 3305 -8 216 325 38 0 chr10 25049829 25049909 -115266856 + MIR SINE MIR 27 109 -153 370 146 0 0 chr10 25049920 25049975 -115266790 + MER61A LTR ERV1 7 61 -282 1647 169 45 60 chr10 25049985 25050387 -115266378 + MER61-int LTR ERV1 1 396 -4821 2513 70 0 10 chr10 25050387 25050701 -115266064 + AluY SINE Alu 1 311 0 366 164 45 0 chr10 25050768 25050835 -115265930 - MER61-int LTR ERV1 -4517 700 631 2245 92 23 0 chr10 25050952 25051255 -115265510 + AluSx SINE Alu 1 310 -2 406 81 32 0 chr10 25051399 25051461 -115265304 + Alu SINE Alu 240 303 -8 738 210 74 6 chr10 25052054 25052230 -115264535 - MER5A DNA MER1_type 0 189 2 2140 132 0 16 chr10 25052275 25052579 -115264186 - AluJo SINE Alu -13 299 1 2771 10 0 10 chr10 25052749 25053057 -115263708 - AluYb8 SINE Alu -13 305 1 2344 108 0 0 chr10 25053371 25053678 -115263087 + AluSq SINE Alu 1 307 -6 1598 175 7 0 chr10 25054053 25054338 -115262427 + AluJo SINE Alu 12 298 -14 1939 162 0 13 chr10 25054837 25055151 -115261614 + AluJb SINE Alu 3 312 0 2049 123 3 3 chr10 25055293 25055585 -115261180 - AluJo SINE Alu 0 312 21 339 370 50 6 chr10 25056454 25056635 -115260130 + MIR3 SINE MIR 4 192 -16 2228 94 0 0 chr10 25057072 25057359 -115259406 + AluSx SINE Alu 1 287 -25 2988 260 85 63 chr10 25057697 25059503 -115257262 + L1ME2 LINE L1 36 1880 -4516 897 118 0 22 chr10 25059514 25059649 -115257116 + FLAM_C SINE Alu 11 142 -1 704 199 114 57 chr10 25059649 25059744 -115257021 + L1ME2 LINE L1 1868 1956 -4440 1649 181 87 16 chr10 25059744 25060065 -115256700 + MER2 DNA MER2_type 1 344 0 704 199 114 57 chr10 25060065 25060301 -115256464 + L1ME2 LINE L1 1956 2218 -4178 368 309 0 34 chr10 25060811 25060960 -115255805 - L2 LINE L2 -2657 657 514 230 285 77 69 chr10 25061349 25061479 -115255286 + MIR SINE MIR 41 171 -91 23 78 0 0 chr10 25061610 25061661 -115255104 + AT_rich Low_complexity Low_complexity 1 51 0 1717 173 4 4 chr10 25063107 25063385 -115253380 + AluJo SINE Alu 1 278 -34 23 33 0 0 chr10 25063973 25064003 -115252762 + AT_rich Low_complexity Low_complexity 1 30 0 252 0 0 0 chr10 25064087 25064115 -115252650 + (CA)n Simple_repeat Simple_repeat 2 29 0 1565 272 118 57 chr10 25064187 25064821 -115251944 + L1ME2 LINE L1 3732 4326 -1889 2340 151 0 6 chr10 25064821 25065171 -115251594 + MER7A DNA MER2_type 1 346 0 1565 272 118 57 chr10 25065171 25065613 -115251152 + L1ME2 LINE L1 4326 4906 -1309 3741 138 41 35 chr10 25065613 25066274 -115250491 + L1MA7 LINE L1 5619 6283 -8 1565 272 118 57 chr10 25066274 25066515 -115250250 + L1ME2 LINE L1 4906 5131 -1084 1003 318 79 14 chr10 25066713 25067297 -115249468 + L1ME2 LINE L1 5196 5838 -395 2064 134 178 8 chr10 25067297 25067663 -115249102 - MSTA LTR MaLR 0 428 1 1003 318 79 14 chr10 25067663 25067847 -115248918 + L1ME2 LINE L1 5838 6009 -224 2197 135 3 0 chr10 25068166 25068477 -115248288 + AluJb SINE Alu 1 312 0 258 284 86 37 chr10 25068535 25068697 -115248068 - MLT1K LTR MaLR -21 567 398 240 315 79 79 chr10 25068809 25068980 -115247785 - MLT1K LTR MaLR -285 303 130 1232 122 16 126 chr10 25068980 25069226 -115247539 + MER20 DNA MER1_type 1 219 0 240 315 79 79 chr10 25069226 25069321 -115247444 - MLT1K LTR MaLR -457 131 37 543 296 119 44 chr10 25069606 25070153 -115246612 - L1ME4a LINE L1 -214 5907 5320 261 57 0 0 chr10 25070451 25070486 -115246279 + (TG)n Simple_repeat Simple_repeat 1 35 0 2592 184 114 73 chr10 25070503 25071230 -115245535 - LTR48 LTR ERV1 -30 757 1 224 310 64 89 chr10 25071711 25071914 -115244851 - MIR3 SINE MIR -3 205 8 886 316 43 39 chr10 25072328 25072816 -115243949 - MLT1J LTR MaLR -20 491 2 296 323 175 31 chr10 25073150 25073379 -115243386 - MIR SINE MIR 0 262 1 275 281 0 0 chr10 25073483 25073547 -115243218 + MIR SINE MIR 64 127 -81 6173 217 71 20 chr10 25073554 25074767 -115241998 + L1ME1 LINE L1 3648 4798 -1368 2169 94 14 0 chr10 25074767 25075043 -115241722 + AluSx SINE Alu 1 280 -32 225 0 0 0 chr10 25075043 25075068 -115241697 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 6173 217 71 20 chr10 25075068 25075105 -115241660 + L1ME1 LINE L1 4798 4832 -1334 191 0 0 94 chr10 25075105 25075137 -115241628 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6173 217 71 20 chr10 25075137 25076148 -115240617 + L1ME1 LINE L1 4832 6025 -141 329 204 0 31 chr10 25076203 25076301 -115240464 + G-rich Low_complexity Low_complexity 5 99 0 199 157 39 0 chr10 25076354 25076405 -115240360 + GA-rich Low_complexity Low_complexity 1 53 0 25 31 0 0 chr10 25076623 25076655 -115240110 + GC_rich Low_complexity Low_complexity 1 32 0 192 149 0 0 chr10 25077269 25077316 -115239449 + (TG)n Simple_repeat Simple_repeat 2 48 0 260 230 81 27 chr10 25077716 25077790 -115238975 - L2 LINE L2 -17 3255 3178 347 270 76 38 chr10 25077973 25078158 -115238607 + L1ME LINE L1 5632 5823 -298 1218 204 124 13 chr10 25078243 25078542 -115238223 - MLT1A2 LTR MaLR -7 367 36 286 271 100 59 chr10 25078591 25078761 -115238004 + MIR SINE MIR 86 262 0 1881 178 54 47 chr10 25079758 25080145 -115236620 - MLT1B LTR MaLR 0 390 1 1018 204 0 0 chr10 25080519 25080681 -115236084 + FAM SINE Alu 5 166 -9 2390 108 136 36 chr10 25081362 25081751 -115235014 - MSTA LTR MaLR 0 428 1 252 0 0 0 chr10 25081930 25081958 -115234807 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 4632 73 10 13 chr10 25081959 25082562 -115234203 - L1PB1 LINE L1 -7 6144 5544 817 184 20 14 chr10 25082756 25083049 -115233716 - L1MD3 LINE L1 0 7995 7529 1331 238 269 20 chr10 25083131 25083766 -115232999 - L1MC4 LINE L1 -132 7910 7118 266 267 95 9 chr10 25084246 25084351 -115232414 + MIR3 SINE MIR 86 199 -9 575 291 147 17 chr10 25085429 25085776 -115230989 + L2 LINE L2 2566 2957 -357 239 195 24 85 chr10 25085927 25086009 -115230756 + L2 LINE L2 3235 3311 -2 318 26 0 0 chr10 25086147 25086186 -115230579 + (TG)n Simple_repeat Simple_repeat 2 40 0 832 193 9 57 chr10 25086187 25086505 -115230260 - L1MA4A LINE L1 -29 6274 5911 977 274 82 16 chr10 25087470 25087849 -115228916 + LTR33 LTR ERVL 102 505 -16 266 343 75 49 chr10 25087870 25088322 -115228443 + L2 LINE L2 2412 2875 -439 234 313 68 41 chr10 25088575 25088722 -115228043 + L2 LINE L2 3080 3230 -42 2340 87 13 3 chr10 25088901 25089200 -115227565 - AluSq SINE Alu -11 302 1 2337 103 0 0 chr10 25089418 25089718 -115227047 - AluSx SINE Alu -12 300 1 2157 111 31 0 chr10 25090210 25090499 -115226266 + AluSx SINE Alu 1 298 -14 721 217 70 0 chr10 25092601 25092758 -115224007 + MER3 DNA MER1_type 2 122 -87 335 100 0 73 chr10 25092758 25092868 -115223897 + (TTTAA)n Simple_repeat Simple_repeat 3 104 0 381 177 0 25 chr10 25092875 25092954 -115223811 + MER3 DNA MER1_type 131 207 -2 837 165 71 39 chr10 25093299 25093481 -115223284 + MIR SINE MIR 41 228 -34 2287 80 20 3 chr10 25093524 25093824 -115222941 - AluSx SINE Alu -5 307 3 1653 191 154 12 chr10 25094501 25094909 -115221856 + MLT1C LTR MaLR 1 466 -1 2179 139 0 0 chr10 25095010 25095311 -115221454 + AluSx SINE Alu 1 301 -11 581 223 129 20 chr10 25095355 25095557 -115221208 - MIR SINE MIR -9 253 30 500 328 80 10 chr10 25095601 25095802 -115220963 - MIR SINE MIR -33 229 15 21 0 0 0 chr10 25096792 25096813 -115219952 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr10 25097037 25097066 -115219699 + AT_rich Low_complexity Low_complexity 1 29 0 327 273 197 25 chr10 25097080 25097144 -115219621 - MIR SINE MIR -27 235 183 6417 130 16 7 chr10 25097144 25098058 -115218707 - MER49 LTR ERV1 0 923 1 327 273 197 25 chr10 25098058 25098191 -115218574 - MIR SINE MIR -79 183 4 1423 199 40 59 chr10 25098253 25098500 -115218265 + Charlie1 DNA MER1_type 2349 2586 -175 1159 137 106 70 chr10 25098500 25098558 -115218207 + MER46A DNA MER2_type 1 55 -2676 1758 137 74 0 chr10 25098558 25098828 -115217937 - AluSx SINE Alu -17 295 6 1159 137 106 70 chr10 25098828 25098996 -115217769 + MER46A DNA MER2_type 55 235 -1 1423 199 40 59 chr10 25098996 25099169 -115217596 + Charlie1 DNA MER1_type 2586 2761 0 201 39 0 0 chr10 25099273 25099299 -115217466 + (T)n Simple_repeat Simple_repeat 1 26 0 511 241 148 42 chr10 25099573 25099789 -115216976 - MIR SINE MIR -1 261 23 1944 119 40 0 chr10 25100521 25100837 -115215928 - AluSx SINE Alu 0 312 1 447 219 93 20 chr10 25101343 25101494 -115215271 - MIR SINE MIR -9 253 92 330 111 0 83 chr10 25101974 25102046 -115214719 - MSTA LTR MaLR 0 426 361 2328 147 55 0 chr10 25102078 25102458 -115214307 - MSTA LTR MaLR -27 401 1 2422 93 3 0 chr10 25103008 25103319 -115213446 + AluSp SINE Alu 1 312 -1 224 200 30 44 chr10 25103743 25103878 -115212887 + (TATAA)n Simple_repeat Simple_repeat 2 134 0 480 254 14 60 chr10 25103903 25104009 -115212756 - L1M1 LINE L1 -4576 3170 3061 2272 109 0 6 chr10 25104009 25104321 -115212444 - AluSg SINE Alu 0 310 1 480 254 14 60 chr10 25104321 25104474 -115212291 - L1M1 LINE L1 -4685 3061 2851 * 4859 220 50 66 chr10 25104464 25106026 -115210739 - L1M4 LINE L1 -1197 4949 3413 2533 55 0 7 chr10 25106026 25106334 -115210431 + AluY SINE Alu 1 306 -5 4859 220 50 66 chr10 25106334 25106460 -115210305 - L1M4 LINE L1 -2733 3413 3287 475 254 52 46 chr10 25107173 25107346 -115209419 - MIR3 SINE MIR -1 207 34 2929 201 16 67 chr10 25107413 25107667 -115209098 + LTR8 LTR ERV1 16 282 -409 2689 139 55 0 chr10 25107667 25108071 -115208694 - MSTB LTR MaLR 0 426 1 2929 201 16 67 chr10 25108071 25108513 -115208252 + LTR8 LTR ERV1 282 676 -15 217 288 80 56 chr10 25108712 25108837 -115207928 + MIR3 SINE MIR 31 158 -50 201 323 63 47 chr10 25108874 25109001 -115207764 - MIR3 SINE MIR -76 132 4 1094 215 81 63 chr10 25109172 25109638 -115207127 - MER39 LTR ERV1 0 707 42 2220 104 3 3 chr10 25109638 25109936 -115206829 + AluSx SINE Alu 1 298 -14 224 200 30 44 chr10 25110373 25110508 -115206257 + (TATAA)n Simple_repeat Simple_repeat 2 134 0 480 254 14 60 chr10 25110533 25110639 -115206126 - L1M1 LINE L1 -4576 3170 3061 2261 112 0 6 chr10 25110639 25110951 -115205814 - AluSg SINE Alu 0 310 1 480 254 14 60 chr10 25110951 25111104 -115205661 - L1M1 LINE L1 -4685 3061 2851 * 7174 224 52 95 chr10 25111094 25112656 -115204109 - L1MCa LINE L1 -1197 5229 3602 2517 58 0 7 chr10 25112656 25112964 -115203801 + AluY SINE Alu 1 306 -5 7174 224 52 95 chr10 25112964 25113197 -115203568 - L1MCa LINE L1 -2824 3602 3361 943 53 0 0 chr10 25113197 25113310 -115203455 - AluY SINE Alu -6 305 193 7174 224 52 95 chr10 25113310 25114595 -115202170 - L1MCa LINE L1 -3065 3361 2023 284 0 28 0 chr10 25114595 25114631 -115202134 + (CA)n Simple_repeat Simple_repeat 2 38 0 7174 224 52 95 chr10 25114631 25115014 -115201751 - L1MCa LINE L1 -4403 2023 1639 1794 175 0 7 chr10 25115014 25115306 -115201459 - AluJo SINE Alu -22 290 1 7174 224 52 95 chr10 25115306 25115487 -115201278 - L1MCa LINE L1 -4787 1639 1452 755 185 9 37 chr10 25115487 25115676 -115201089 - MLT1A1 LTR MaLR 0 443 209 664 274 44 68 chr10 25115676 25116016 -115200749 - L1MCa LINE L1 -5689 727 396 446 311 64 17 chr10 25116132 25116367 -115200398 + HERV16 LTR ERVL 2060 2305 -2691 743 167 40 16 chr10 25116519 25116645 -115200120 + FLAM_A SINE Alu 1 129 -4 1646 170 7 14 chr10 25117885 25118167 -115198598 - AluJb SINE Alu -19 293 14 5054 118 8 5 chr10 25118357 25119092 -115197673 + L1PA13 LINE L1 5427 6163 0 801 123 0 72 chr10 25119129 25119267 -115197498 - FLAM_A SINE Alu 0 142 15 1638 158 25 11 chr10 25119704 25119988 -115196777 + AluJo SINE Alu 11 298 -14 1788 249 18 20 chr10 25120103 25120541 -115196224 + L1MC5 LINE L1 5389 5825 -1983 2424 218 142 88 chr10 25120561 25121266 -115195499 + L1MC5 LINE L1 6082 6747 -1214 1212 178 66 56 chr10 25121266 25121553 -115195212 + AluJo SINE Alu 1 290 -22 2424 218 142 88 chr10 25121553 25121774 -115194991 + L1MC5 LINE L1 6747 6955 -1006 1529 189 0 34 chr10 25121774 25122065 -115194700 + AluJb SINE Alu 1 281 -31 819 56 32 8 chr10 25122068 25122193 -115194572 + (GAAA)n Simple_repeat Simple_repeat 2 129 0 2424 218 142 88 chr10 25122193 25122947 -115193818 + L1MC5 LINE L1 6956 7881 -80 358 319 113 61 chr10 25122953 25123182 -115193583 + L1MEc LINE L1 175 415 -5981 2338 90 3 10 chr10 25123411 25123723 -115193042 + AluY SINE Alu 1 310 -1 597 247 23 6 chr10 25123995 25124169 -115192596 + MER104 DNA Tc2 4 180 0 279 331 78 21 chr10 25124207 25124349 -115192416 - L2 LINE L2 -467 2847 2698 410 119 0 0 chr10 25124355 25124414 -115192351 + MSTB LTR MaLR 1 59 -367 818 159 28 88 chr10 25125943 25126228 -115190537 + MER31-int LTR ERV1 1270 1686 -3250 247 260 240 0 chr10 25127093 25127193 -115189572 + L2 LINE L2 3174 3297 -16 219 225 0 0 chr10 25127159 25127199 -115189566 + MIR SINE MIR 219 258 -4 * 2061 179 35 5 chr10 25127364 25127739 -115189026 + MSTB LTR MaLR 41 426 0 1166 322 45 27 chr10 25127758 25128494 -115188271 - L2 LINE L2 -650 2664 1916 382 250 88 36 chr10 25128566 25128758 -115188007 + L1P5 LINE L1 5270 5471 -683 * 5453 163 22 3 chr10 25128739 25130425 -115186340 + L1PA16 LINE L1 4379 6099 -67 520 302 116 35 chr10 25130526 25131019 -115185746 + L1ME4a LINE L1 5578 6110 -11 1849 159 17 0 chr10 25131915 25132217 -115184548 - AluJb SINE Alu -5 307 1 552 281 101 60 chr10 25132389 25132571 -115184194 - MIR SINE MIR -12 250 56 1804 163 13 10 chr10 25132571 25132872 -115183893 - AluJo SINE Alu -10 302 1 552 281 101 60 chr10 25132872 25132906 -115183859 - MIR SINE MIR -206 56 25 1327 84 0 0 chr10 25132943 25133109 -115183656 - AluSg/x SINE Alu -22 288 123 345 186 53 0 chr10 25133109 25133222 -115183543 + (TA)n Simple_repeat Simple_repeat 2 120 0 919 147 0 0 chr10 25133223 25133366 -115183399 - FLAM_C SINE Alu 0 143 1 180 0 0 0 chr10 25134230 25134250 -115182515 + (CA)n Simple_repeat Simple_repeat 2 21 0 379 336 97 55 chr10 25134283 25134500 -115182265 + L2 LINE L2 2866 3091 -181 356 315 34 20 chr10 25134751 25134897 -115181868 + L2 LINE L2 3125 3272 0 771 201 0 0 chr10 25135890 25136064 -115180701 + (TG)n Simple_repeat Simple_repeat 1 174 0 2045 136 0 3 chr10 25136152 25136453 -115180312 - AluSx SINE Alu -12 300 1 498 318 68 51 chr10 25136455 25136810 -115179955 - L1ME3 LINE L1 -273 5889 5523 2309 101 0 0 chr10 25136810 25137106 -115179659 + AluSc SINE Alu 1 296 -13 498 318 68 51 chr10 25137106 25137222 -115179543 - L1ME3 LINE L1 -639 5523 5410 2277 104 0 25 chr10 25137316 25137633 -115179132 - AluSx SINE Alu -3 309 1 211 356 0 39 chr10 25137741 25137845 -115178920 + MIR SINE MIR 6 105 -157 690 264 43 39 chr10 25137890 25138121 -115178644 + MIR SINE MIR 5 236 -26 268 283 31 9 chr10 25138192 25138301 -115178464 - MIR SINE MIR -49 159 47 2159 136 0 10 chr10 25139352 25139662 -115177103 + AluSx SINE Alu 1 307 -5 251 133 79 0 chr10 25139711 25139876 -115176889 + (ATATG)n Simple_repeat Simple_repeat 3 180 0 293 152 48 8 chr10 25139884 25140009 -115176756 + (TATAA)n Simple_repeat Simple_repeat 5 134 0 298 113 49 28 chr10 25140131 25140273 -115176492 + (TA)n Simple_repeat Simple_repeat 2 146 0 10576 24 0 6 chr10 25140280 25142224 -115174541 + L1PA3 LINE L1 4214 6153 -2 376 34 68 62 chr10 25142238 25142415 -115174350 + (TA)n Simple_repeat Simple_repeat 1 178 0 1898 160 0 10 chr10 25142998 25143305 -115173460 + AluJo SINE Alu 1 304 -8 1969 257 36 15 chr10 25143380 25143906 -115172859 + MLT1H1 LTR MaLR 19 555 0 438 290 26 19 chr10 25143914 25144069 -115172696 + L1MB8 LINE L1 5590 5745 -425 669 185 23 7 chr10 25144357 25144628 -115172137 + GA-rich Low_complexity Low_complexity 1 275 0 310 298 24 0 chr10 25144641 25144725 -115172040 + GA-rich Low_complexity Low_complexity 3 88 0 233 287 85 54 chr10 25144862 25144991 -115171774 + L2 LINE L2 3180 3312 -1 2257 51 0 98 chr10 25146647 25147009 -115169756 - AluY SINE Alu 0 311 1 2095 90 53 30 chr10 25147227 25147526 -115169239 + AluSg SINE Alu 1 306 -4 241 333 63 0 chr10 25147653 25147779 -115168986 + L2 LINE L2 3137 3270 -2 549 278 28 59 chr10 25147808 25148063 -115168702 - MIR SINE MIR 0 262 16 506 221 161 93 chr10 25148205 25148572 -115168193 - MLT1J2 LTR MaLR 0 450 59 1897 186 13 23 chr10 25148574 25148961 -115167804 + L1MB8 LINE L1 5795 6177 -1 229 314 42 25 chr10 25148971 25149089 -115167676 + L3 LINE CR1 770 889 -688 2258 115 0 0 chr10 25149370 25149665 -115167100 - AluSx SINE Alu -13 299 5 1397 148 4 37 chr10 25150499 25150743 -115166022 + AluJo SINE Alu 75 310 -2 303 140 0 0 chr10 25150751 25150801 -115165964 + (GGGA)n Simple_repeat Simple_repeat 3 52 0 2168 117 3 3 chr10 25151423 25151721 -115165044 + AluSx SINE Alu 1 298 -14 194 259 138 52 chr10 25151832 25151948 -115164817 + MIR SINE MIR 115 240 -22 1258 204 55 67 chr10 25152397 25152818 -115163947 + MLT1D LTR MaLR 1 416 -89 808 152 7 29 chr10 25152824 25152840 -115163925 - AluJb SINE Alu -176 136 121 189 74 0 0 chr10 25152840 25152867 -115163898 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 808 152 7 29 chr10 25152867 25152988 -115163777 - AluJb SINE Alu -191 121 2 332 152 89 152 chr10 25152991 25153031 -115163734 + MLT1D LTR MaLR 401 442 -63 1969 153 10 0 chr10 25153031 25153331 -115163434 + AluSx SINE Alu 3 305 -7 332 152 89 152 chr10 25153331 25153402 -115163363 + MLT1D LTR MaLR 442 505 0 663 150 0 47 chr10 25153640 25153767 -115162998 + FLAM_A SINE Alu 22 142 0 1064 232 90 12 chr10 25154724 25155047 -115161718 + L1ME3A LINE L1 5602 5949 -221 227 263 166 51 chr10 25155111 25155286 -115161479 + L1ME3A LINE L1 5962 6156 -14 415 295 96 26 chr10 25155360 25155861 -115160904 - L1ME4a LINE L1 0 6121 5586 319 320 41 8 chr10 25156168 25156290 -115160475 + MIR SINE MIR 117 242 -20 1203 286 35 33 chr10 25156642 25157068 -115159697 - MLT1J2 LTR MaLR 0 450 24 246 273 0 0 chr10 25157117 25157172 -115159593 + (TA)n Simple_repeat Simple_repeat 1 55 0 305 265 72 12 chr10 25157173 25157256 -115159509 - L1MC4 LINE L1 -1340 6702 6615 1696 164 29 0 chr10 25158079 25158359 -115158406 + AluJb SINE Alu 4 291 -21 413 233 25 36 chr10 25159637 25159774 -115156991 - MIR SINE MIR -63 145 43 23 0 0 0 chr10 25162209 25162232 -115154533 + GC_rich Low_complexity Low_complexity 1 23 0 501 352 86 12 chr10 25163879 25164206 -115152559 + L2 LINE L2 2422 2772 -542 24 0 0 0 chr10 25164481 25164505 -115152260 + AT_rich Low_complexity Low_complexity 1 24 0 249 276 0 0 chr10 25164669 25164727 -115152038 + L2 LINE L2 3214 3271 -1 1378 285 29 27 chr10 25164940 25165385 -115151380 - MLT1J LTR MaLR -65 446 1 922 256 75 47 chr10 25165596 25165956 -115150809 - MLT1I LTR MaLR -1 408 39 241 176 59 82 chr10 25167033 25167118 -115149647 - AluSc SINE Alu 0 299 217 1707 141 19 0 chr10 25167244 25167513 -115149252 - AluSg SINE Alu -36 274 1 214 347 61 20 chr10 25167642 25167740 -115149025 + L2 LINE L2 3170 3271 -1 1517 153 117 0 chr10 25167843 25168117 -115148648 + AluJb SINE Alu 1 306 -6 230 206 48 0 chr10 25168166 25168229 -115148536 + Charlie7 DNA MER1_type 44 109 -2503 * 372 173 45 60 chr10 25168207 25168340 -115148425 + Charlie7 DNA MER1_type 2437 2567 -45 879 282 66 63 chr10 25168398 25168441 -115148324 + MLT1J LTR MaLR 36 77 -434 4428 29 0 2 chr10 25168441 25168947 -115147818 + L1PA5 LINE L1 5636 6142 -12 198 0 0 0 chr10 25168947 25168969 -115147796 + (TA)n Simple_repeat Simple_repeat 1 22 0 879 282 66 63 chr10 25168975 25169342 -115147423 + MLT1J LTR MaLR 77 447 -64 321 327 128 49 chr10 25169610 25169836 -115146929 - MIR SINE MIR -6 256 13 244 315 0 0 chr10 25170021 25170094 -115146671 + (TA)n Simple_repeat Simple_repeat 2 74 0 248 188 25 25 chr10 25170257 25170337 -115146428 + (TTAA)n Simple_repeat Simple_repeat 4 83 0 1753 174 26 0 chr10 25171359 25171663 -115145102 - AluJb SINE Alu 0 312 1 573 232 33 20 chr10 25171965 25172116 -115144649 - MIR SINE MIR -2 260 108 1265 145 5 10 chr10 25173166 25173373 -115143392 + L1PB3 LINE L1 5946 6151 -3 1071 133 0 16 chr10 25173613 25173801 -115142964 + L1MA4 LINE L1 6115 6299 -1 26 0 0 0 chr10 25173802 25173828 -115142937 + AT_rich Low_complexity Low_complexity 1 26 0 1283 146 163 12 chr10 25173959 25174226 -115142539 - AluSx SINE Alu 0 304 1 521 210 116 55 chr10 25174277 25174458 -115142307 - L1MC4a LINE L1 -1874 5934 5743 1006 151 0 0 chr10 25175092 25175258 -115141507 + FRAM SINE Alu 4 169 -7 587 163 0 0 chr10 25175379 25175471 -115141294 + AluJ/FLAM SINE Alu 6 97 -215 677 176 0 0 chr10 25175597 25175705 -115141060 + FLAM_C SINE Alu 11 118 -25 296 193 0 0 chr10 25175734 25175791 -115140974 + MIR SINE MIR 68 124 -84 189 107 0 0 chr10 25176403 25176431 -115140334 + (GA)n Simple_repeat Simple_repeat 2 29 0 823 192 0 0 chr10 25176457 25176608 -115140157 + FRAM SINE Alu 5 155 -21 378 42 0 0 chr10 25176943 25176991 -115139774 + (TC)n Simple_repeat Simple_repeat 2 49 0 288 0 0 0 chr10 25177275 25177307 -115139458 + (TG)n Simple_repeat Simple_repeat 1 32 0 2018 106 0 0 chr10 25177701 25177976 -115138789 + AluSx SINE Alu 1 275 -37 360 0 0 0 chr10 25178351 25178391 -115138374 + (CA)n Simple_repeat Simple_repeat 2 41 0 23 78 0 0 chr10 25179960 25180011 -115136754 + GC_rich Low_complexity Low_complexity 1 51 0 23 33 0 0 chr10 25180177 25180207 -115136558 + GC_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr10 25180531 25180554 -115136211 + GC_rich Low_complexity Low_complexity 1 23 0 246 195 32 41 chr10 25180720 25180843 -115135922 + (CGG)n Simple_repeat Simple_repeat 1 122 0 228 220 0 0 chr10 25180996 25181055 -115135710 + G-rich Low_complexity Low_complexity 5 63 0 23 0 0 0 chr10 25181251 25181274 -115135491 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr10 25181968 25181992 -115134773 + AT_rich Low_complexity Low_complexity 1 24 0 340 257 0 67 chr10 25182369 25182474 -115134291 - MIR SINE MIR -80 182 85 212 143 0 0 chr10 25185420 25185455 -115131310 + (CCCCCT)n Simple_repeat Simple_repeat 6 40 0 201 213 0 0 chr10 25194316 25194363 -115122402 + (TA)n Simple_repeat Simple_repeat 2 48 0 26 50 0 0 chr10 25194763 25194803 -115121962 + AT_rich Low_complexity Low_complexity 1 40 0 199 214 129 29 chr10 25196487 25196557 -115120208 + L2 LINE L2 3196 3272 0 470 253 65 65 chr10 25196633 25196819 -115119946 + MLT1H LTR MaLR 106 291 -258 195 296 63 69 chr10 25197081 25197270 -115119495 - L2 LINE L2 -1104 2210 2023 811 192 72 74 chr10 25197270 25197594 -115119171 + L1MA9 LINE L1 5990 6305 -7 1955 151 0 0 chr10 25197613 25197918 -115118847 + AluJb SINE Alu 1 305 -7 1900 156 0 10 chr10 25198317 25198618 -115118147 - AluSx SINE Alu -14 298 1 1598 193 64 64 chr10 25198919 25199352 -115117413 - MLT1C LTR MaLR 0 467 32 207 0 0 0 chr10 25199352 25199375 -115117390 + (TG)n Simple_repeat Simple_repeat 1 23 0 1598 193 64 64 chr10 25199375 25199408 -115117357 - MLT1C LTR MaLR -434 33 1 1971 186 103 5 chr10 25199838 25200263 -115116502 + MLT1C LTR MaLR 1 467 0 414 0 0 0 chr10 25200674 25200720 -115116045 + (GA)n Simple_repeat Simple_repeat 1 46 0 433 241 200 38 chr10 25200969 25201259 -115115506 + L1ME3A LINE L1 981 1317 -4888 295 254 40 24 chr10 25201340 25201485 -115115280 + L1ME3A LINE L1 1352 1499 -4718 853 314 107 34 chr10 25201526 25202223 -115114542 + L1ME3A LINE L1 1997 2714 -3501 287 281 161 35 chr10 25202269 25202635 -115114130 + L1ME3A LINE L1 2933 3252 -2963 1997 132 0 3 chr10 25202635 25202931 -115113834 + AluSx SINE Alu 1 295 -17 287 281 161 35 chr10 25202931 25203155 -115113610 + L1ME3A LINE L1 3252 3597 -2618 1973 96 0 0 chr10 25203812 25204072 -115112693 - AluSg SINE Alu -16 294 35 540 277 145 26 chr10 25204100 25204631 -115112134 + L1ME3A LINE L1 3639 4232 -1983 860 275 123 36 chr10 25204661 25205218 -115111547 + L1ME3A LINE L1 5327 5936 -303 1552 172 20 26 chr10 25206659 25206961 -115109804 - AluJb SINE Alu -12 300 1 21 36 0 0 chr10 25208268 25208296 -115108469 + AT_rich Low_complexity Low_complexity 1 28 0 1651 200 0 17 chr10 25208398 25208698 -115108067 + AluJo SINE Alu 1 295 -17 279 311 193 0 chr10 25208844 25209005 -115107760 - MIR SINE MIR -48 214 23 636 260 61 10 chr10 25209104 25209300 -115107465 + MIR SINE MIR 13 218 -44 1611 149 204 25 chr10 25209559 25209922 -115106843 - MSTA LTR MaLR 0 428 1 437 182 0 0 chr10 25210093 25210159 -115106606 - U4 snRNA snRNA -79 66 1 1404 179 59 0 chr10 25210901 25211174 -115105591 + L1PA16 LINE L1 5873 6161 -5 434 171 0 146 chr10 25211251 25211374 -115105391 + AluJb SINE Alu 86 190 -122 453 121 205 0 chr10 25211374 25211457 -115105308 - AluJ/FLAM SINE Alu -210 102 3 1627 157 33 47 chr10 25211590 25211890 -115104875 - AluJb SINE Alu -15 297 2 13402 65 6 0 chr10 25212642 25214390 -115102375 + L1PA5 LINE L1 741 2498 -3648 376 22 0 0 chr10 25214514 25214559 -115102206 + L1PA5 LINE L1 2521 2565 -3581 22895 44 7 0 chr10 25214559 25218207 -115098558 + L1PA5 LINE L1 2497 6154 0 390 210 30 0 chr10 25218213 25218313 -115098452 + L1ME3A LINE L1 2395 2497 -3649 994 285 89 40 chr10 25218350 25218559 -115098206 + L1ME3A LINE L1 4386 4583 -1581 236 77 26 0 chr10 25218559 25218598 -115098167 + (TTTTG)n Simple_repeat Simple_repeat 5 44 0 994 285 89 40 chr10 25218598 25219530 -115097235 + L1ME3A LINE L1 4583 5585 -579 1168 158 86 19 chr10 25219587 25219796 -115096969 - AluJb SINE Alu -22 290 68 481 303 85 72 chr10 25219796 25220186 -115096579 + MLT1J LTR MaLR 73 467 -44 650 297 43 43 chr10 25220222 25220572 -115096193 + L1ME3A LINE L1 5600 5949 -221 1913 177 0 0 chr10 25221490 25221784 -115094981 + AluJo SINE Alu 5 298 -14 270 208 0 0 chr10 25222664 25222717 -115094048 + L1PA13 LINE L1 5522 5574 -587 3357 93 2 14 chr10 25222850 25223336 -115093429 + L1PA13 LINE L1 5676 6155 -8 2242 103 10 0 chr10 25223380 25223680 -115093085 + AluSq SINE Alu 1 303 -10 623 228 27 7 chr10 25223681 25223847 -115092918 + L1ME2 LINE L1 4690 4858 -1288 264 284 68 11 chr10 25223869 25223957 -115092808 - MLT1G1 LTR MaLR -502 93 1 2293 187 66 81 chr10 25223957 25224151 -115092614 + L1ME2 LINE L1 5125 5320 -844 729 170 28 44 chr10 25224151 25224333 -115092432 + L1MB2 LINE L1 5991 6169 -2 2293 187 66 81 chr10 25224333 25224486 -115092279 + L1ME2 LINE L1 5320 5474 -690 2015 91 11 11 chr10 25224486 25224614 -115092151 + AluSg SINE Alu 5 132 -187 2585 47 0 19 chr10 25224614 25224931 -115091834 + AluY SINE Alu 1 311 0 2015 91 11 11 chr10 25224931 25225117 -115091648 + AluSg SINE Alu 131 319 0 2293 187 66 81 chr10 25225117 25225243 -115091522 + L1ME2 LINE L1 5474 5600 -564 2252 111 3 0 chr10 25225243 25225541 -115091224 + AluSx SINE Alu 1 299 -13 3392 82 21 4 chr10 25225542 25226015 -115090750 - L1PA15 LINE L1 -13 6152 5672 2293 187 66 81 chr10 25226015 25226412 -115090353 + L1ME2 LINE L1 5599 5981 -183 448 247 110 13 chr10 25226607 25226761 -115090004 + L1ME2 LINE L1 5987 6155 -9 367 331 22 29 chr10 25226912 25227048 -115089717 + L2 LINE L2 3136 3270 -2 273 305 110 61 chr10 25228269 25228433 -115088332 + L2 LINE L2 3058 3229 -43 30 45 0 0 chr10 25228729 25228773 -115087992 + AT_rich Low_complexity Low_complexity 1 44 0 1289 148 0 28 chr10 25228814 25229030 -115087735 + AluJb SINE Alu 88 297 -15 761 290 104 14 chr10 25229050 25229342 -115087423 + L1MC4a LINE L1 6637 6938 -847 264 157 9 222 chr10 25229383 25229491 -115087274 + MLT1D-int LTR MaLR 568 652 -719 2154 209 39 125 chr10 25229548 25230326 -115086439 + MLT1D-int LTR MaLR 661 1371 0 976 210 19 19 chr10 25230326 25230540 -115086225 + MLT1D LTR MaLR 1 214 -291 764 295 129 29 chr10 25230540 25230788 -115085977 + L1MEc LINE L1 1276 1498 -4717 2193 112 3 7 chr10 25230788 25231093 -115085672 - AluSg SINE Alu -6 304 1 764 295 129 29 chr10 25231093 25232205 -115084560 + L1MEc LINE L1 1498 2739 -3476 1027 110 18 25 chr10 25232226 25232389 -115084376 + AluSp SINE Alu 1 162 -151 1441 72 5 10 chr10 25232502 25232695 -115084070 + AluSp SINE Alu 109 300 -13 1165 206 67 58 chr10 25232697 25232888 -115083877 + L1MEc LINE L1 2753 2941 -3274 1845 171 3 0 chr10 25232888 25233180 -115083585 - AluJb SINE Alu -19 293 1 1165 206 67 58 chr10 25233180 25233454 -115083311 + L1MEc LINE L1 2941 3222 -2993 5440 166 20 9 chr10 25233455 25235362 -115081403 + L1PA15 LINE L1 4247 6165 0 433 207 62 78 chr10 25235374 25235567 -115081198 + L1MEc LINE L1 3206 3395 -2820 744 140 9 0 chr10 25235569 25235676 -115081089 + Tigger3(Golem) DNA MER2_type 1 108 -2921 785 111 21 21 chr10 25235676 25235820 -115080945 + Tigger3(Golem) DNA MER2_type 2285 2428 -601 956 132 7 14 chr10 25235829 25235973 -115080792 - AluJb SINE Alu -27 285 143 3940 112 33 10 chr10 25235974 25236573 -115080192 + Tigger3(Golem) DNA MER2_type 2416 3028 -1 381 229 62 56 chr10 25236585 25236764 -115080001 + L1MEc LINE L1 3406 3585 -2630 1500 90 0 24 chr10 25237937 25238149 -115078616 + AluSq SINE Alu 105 311 -2 1908 163 3 0 chr10 25239805 25240093 -115076672 + AluJo SINE Alu 1 289 -23 279 288 88 28 chr10 25241032 25241295 -115075470 - L1MEd LINE L1 -1235 1255 947 24 53 0 0 chr10 25241360 25241398 -115075367 + AT_rich Low_complexity Low_complexity 1 38 0 340 305 11 21 chr10 25241452 25241547 -115075218 - L2 LINE L2 -1 3312 3219 275 357 54 67 chr10 25241603 25241713 -115075052 - L2 LINE L2 -838 2476 2366 212 0 36 0 chr10 25241713 25241741 -115075024 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 275 357 54 67 chr10 25241741 25241820 -115074945 - L2 LINE L2 -948 2366 2288 2242 104 51 25 chr10 25241820 25242175 -115074590 + THE1B LTR MaLR 1 364 0 275 357 54 67 chr10 25242175 25242298 -115074467 - L2 LINE L2 -1026 2288 2167 2226 102 0 7 chr10 25243201 25243494 -115073271 - AluSq SINE Alu -22 291 1 27 0 0 0 chr10 25243497 25243524 -115073241 + AT_rich Low_complexity Low_complexity 1 27 0 1659 188 10 7 chr10 25245044 25245336 -115071429 - AluJo SINE Alu -19 293 1 1177 275 80 35 chr10 25245372 25245907 -115070858 + L1MCc LINE L1 24 582 -5841 1218 290 102 69 chr10 25245919 25246554 -115070211 + L1MCc LINE L1 464 1128 -5295 1671 196 0 4 chr10 25246554 25246835 -115069930 + AluJb SINE Alu 2 281 -31 1218 290 102 69 chr10 25246835 25246934 -115069831 + L1MCc LINE L1 1128 1222 -5201 201 262 0 0 chr10 25246956 25246998 -115069767 + (TATG)n Simple_repeat Simple_repeat 2 43 0 322 235 47 0 chr10 25247006 25247091 -115069674 + L1MCc LINE L1 1238 1326 -5097 3088 152 77 54 chr10 25297665 25297756 -115019009 - L1MB7 LINE L1 -26 6158 6071 243 0 0 0 chr10 25297756 25297783 -115018982 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1434 184 43 29 chr10 25297785 25297941 -115018824 - AluJo SINE Alu -30 282 119 225 0 0 0 chr10 25297941 25297966 -115018799 + (TTA)n Simple_repeat Simple_repeat 1 25 0 1434 184 43 29 chr10 25297966 25298087 -115018678 - AluJo SINE Alu -193 119 1 3088 152 77 54 chr10 25298087 25298100 -115018665 - L1MB7 LINE L1 -113 6071 6060 1820 172 3 0 chr10 25298100 25298397 -115018368 - AluJb SINE Alu -1 311 14 3088 152 77 54 chr10 25298397 25298952 -115017813 - L1MB7 LINE L1 -124 6060 5480 976 219 0 0 chr10 25298955 25299138 -115017627 - AluJo SINE Alu -12 300 118 207 0 0 0 chr10 25299246 25299269 -115017496 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 230 236 73 0 chr10 25299749 25299804 -115016961 - L2 LINE L2 -4 3268 3210 1963 136 0 17 chr10 25299966 25300268 -115016497 - AluSx SINE Alu -15 297 1 302 311 60 24 chr10 25300325 25300492 -115016273 + MIR SINE MIR 82 254 -8 671 254 75 25 chr10 25300641 25300842 -115015923 + MER57B LTR ERV1 1 211 -223 396 228 25 0 chr10 25301008 25301087 -115015678 - MER21B LTR ERV1 -778 85 5 525 169 0 119 chr10 25301279 25301329 -115015436 - U13 snRNA snRNA 0 104 74 1751 179 10 0 chr10 25301329 25301630 -115015135 - AluJo SINE Alu -5 307 4 525 169 0 119 chr10 25301630 25301697 -115015068 - U13 snRNA snRNA -30 74 1 702 232 14 0 chr10 25302484 25302626 -115014139 + L1ME3A LINE L1 6022 6165 -5 1534 174 3 63 chr10 25302867 25303042 -115013723 - AluJo SINE Alu -14 298 114 198 0 0 0 chr10 25303042 25303064 -115013701 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 1996 108 41 0 chr10 25303065 25303333 -115013432 - AluSc SINE Alu -30 279 1 1534 174 3 63 chr10 25303333 25303471 -115013294 - AluJo SINE Alu -197 115 2 1459 94 14 9 chr10 25303648 25303860 -115012905 - L1MA2 LINE L1 0 6304 6092 1728 230 113 62 chr10 25303875 25304389 -115012376 + MLT1F LTR MaLR 1 540 -2 342 194 0 0 chr10 25304423 25304485 -115012280 - MSTA LTR MaLR -1 427 366 279 343 61 0 chr10 25304661 25304760 -115012005 + L2 LINE L2 3168 3272 0 2190 149 136 18 chr10 25304772 25305155 -115011610 - MSTA LTR MaLR 0 428 1 26 50 0 0 chr10 25305520 25305560 -115011205 + AT_rich Low_complexity Low_complexity 1 40 0 885 129 8 0 chr10 25305560 25305684 -115011081 + FLAM_C SINE Alu 1 125 -18 929 148 0 0 chr10 25306110 25306238 -115010527 + AluJo/FLAM SINE Alu 1 128 -174 836 129 0 30 chr10 25306122 25306254 -115010511 + FLAM_C SINE Alu 13 140 -3 351 0 0 0 chr10 25306644 25306683 -115010082 + (TG)n Simple_repeat Simple_repeat 2 40 0 1719 174 31 3 chr10 25306683 25306970 -115009795 - AluJb SINE Alu -17 295 1 22 35 0 0 chr10 25307637 25307666 -115009099 + AT_rich Low_complexity Low_complexity 1 29 0 804 178 0 0 chr10 25307707 25307836 -115008929 - AluJb SINE Alu -183 129 1 1032 112 0 0 chr10 25307869 25308012 -115008753 + L1PB1 LINE L1 6008 6150 -1 189 0 0 0 chr10 25308219 25308240 -115008525 + (CA)n Simple_repeat Simple_repeat 1 21 0 2594 134 7 19 chr10 25308355 25308772 -115007993 - MER50 LTR ERV1 -321 413 2 345 289 67 0 chr10 25308773 25308877 -115007888 + MER34B LTR ERV1 452 562 -3 303 311 25 19 chr10 25308904 25309065 -115007700 - LTR23 LTR ERV1 0 437 276 1753 152 0 62 chr10 25309068 25309390 -115007375 + AluJo SINE Alu 1 302 -10 1355 145 18 26 chr10 25309417 25309645 -115007120 - L1PA16 LINE L1 0 6166 5941 1080 151 73 5 chr10 25309748 25309954 -115006811 + MSTB1 LTR MaLR 213 432 0 895 192 5 96 chr10 25310126 25310257 -115006508 - MER5A DNA MER1_type 0 189 82 1770 169 36 0 chr10 25310257 25310558 -115006207 - AluSx SINE Alu 0 312 1 895 192 5 96 chr10 25310558 25310634 -115006131 - MER5A DNA MER1_type -107 82 1 744 266 107 60 chr10 25310710 25311225 -115005540 - MER34 LTR ERV1 -3 539 1 319 246 109 18 chr10 25311258 25311368 -115005397 - MIR SINE MIR -51 211 92 1822 122 0 8 chr10 25311632 25311887 -115004878 - AluSq SINE Alu -60 253 1 570 180 0 36 chr10 25312043 25312154 -115004611 + FLAM_C SINE Alu 37 143 0 25 51 0 0 chr10 25312784 25312823 -115003942 + AT_rich Low_complexity Low_complexity 1 39 0 1465 163 0 4 chr10 25312846 25313085 -115003680 + AluJo SINE Alu 75 312 0 495 33 0 0 chr10 25313715 25313776 -115002989 + (TTCC)n Simple_repeat Simple_repeat 4 64 0 1827 160 33 0 chr10 25313801 25313978 -115002787 - AluSx SINE Alu -2 310 117 207 114 0 0 chr10 25313978 25314013 -115002752 + (TG)n Simple_repeat Simple_repeat 2 36 0 1827 160 33 0 chr10 25314013 25314135 -115002630 - AluSx SINE Alu -195 117 1 222 37 0 0 chr10 25314659 25314686 -115002079 + (CA)n Simple_repeat Simple_repeat 2 28 0 854 195 19 0 chr10 25314714 25314868 -115001897 - AluJb SINE Alu -24 288 132 1815 133 3 67 chr10 25314871 25315186 -115001579 - AluSx SINE Alu -17 295 1 3484 178 11 40 chr10 25315503 25316221 -115000544 - Tigger5 DNA MER2_type -647 1676 980 1184 211 0 5 chr10 25316228 25316441 -115000324 - AluJo SINE Alu -100 212 1 475 202 22 0 chr10 25316453 25316542 -115000223 - Tigger5 DNA MER2_type -2232 91 1 2154 134 3 10 chr10 25316771 25317078 -114999687 + AluSx SINE Alu 1 305 -7 238 340 54 27 chr10 25317375 25317560 -114999205 + LTR67 LTR ERVL 64 253 -304 248 273 121 10 chr10 25317663 25317762 -114999003 + LTR67 LTR ERVL 445 554 -3 715 227 0 0 chr10 25318275 25318416 -114998349 + FLAM_C SINE Alu 2 142 -1 828 121 171 0 chr10 25319259 25319399 -114997366 + MSTA LTR MaLR 1 164 -264 853 166 6 6 chr10 25319505 25319662 -114997103 + FRAM SINE Alu 20 176 0 1681 186 7 13 chr10 25319904 25320210 -114996555 - AluJo SINE Alu -7 305 2 4002 113 51 10 chr10 25320339 25320925 -114995840 + MER4B LTR ERV1 1 610 0 22 56 0 0 chr10 25320965 25321001 -114995764 + AT_rich Low_complexity Low_complexity 1 36 0 270 0 0 0 chr10 25321578 25321608 -114995157 + (A)n Simple_repeat Simple_repeat 1 30 0 1141 157 0 16 chr10 25321608 25321799 -114994966 + AluSp SINE Alu 121 308 -5 200 122 24 0 chr10 25322511 25322552 -114994213 + (TG)n Simple_repeat Simple_repeat 1 42 0 2233 119 28 14 chr10 25322964 25323316 -114993449 - MER21A LTR ERV1 0 931 575 21 0 0 0 chr10 25323664 25323685 -114993080 + AT_rich Low_complexity Low_complexity 1 21 0 205 146 0 42 chr10 25324279 25324322 -114992443 + (TA)n Simple_repeat Simple_repeat 1 42 0 2192 117 0 10 chr10 25324322 25324621 -114992144 - AluSq SINE Alu -17 296 1 992 199 0 25 chr10 25324642 25324843 -114991922 - AluJ SINE Alu -1 311 116 327 197 15 15 chr10 25325738 25325804 -114990961 + AluJ/FLAM SINE Alu 1 66 -236 551 111 0 0 chr10 25325904 25325985 -114990780 + AluY SINE Alu 201 281 -30 3685 145 9 14 chr10 25325999 25326580 -114990185 - MER50 LTR ERV1 -156 578 1 875 165 0 15 chr10 25326606 25326739 -114990026 - AluJ SINE Alu -171 131 1 391 300 8 8 chr10 25326902 25327032 -114989733 - L3b LINE CR1 -352 1231 1102 402 162 0 29 chr10 25327239 25327307 -114989458 + AluJ/FLAM SINE Alu 3 68 -244 975 169 5 50 chr10 25327415 25327465 -114989300 - Charlie1 DNA MER1_type -199 2562 2511 1888 142 3 39 chr10 25327465 25327774 -114988991 + AluJb SINE Alu 1 298 -14 975 169 5 50 chr10 25327774 25327924 -114988841 - Charlie1 DNA MER1_type -250 2511 2371 286 314 0 0 chr10 25327929 25327999 -114988766 - Charlie1 DNA MER1_type -2690 71 2 270 280 92 46 chr10 25328024 25328242 -114988523 - L2 LINE L2 -1155 2159 1932 188 33 0 33 chr10 25328424 25328454 -114988311 + (TTG)n Simple_repeat Simple_repeat 2 30 0 817 141 31 0 chr10 25328454 25328577 -114988188 - FRAM SINE Alu -26 150 24 1297 228 92 42 chr10 25328590 25329016 -114987749 + MLT1J LTR MaLR 65 511 0 1717 162 13 36 chr10 25329169 25329477 -114987288 + AluJb SINE Alu 1 301 -11 381 282 67 41 chr10 25329528 25329723 -114987042 + LTR33 LTR ERVL 1 200 -321 383 190 0 153 chr10 25329838 25329899 -114986866 + LTR33 LTR ERVL 405 435 -86 892 140 0 22 chr10 25329899 25330035 -114986730 - FLAM_C SINE Alu 0 133 1 383 190 0 153 chr10 25330035 25330110 -114986655 + LTR33 LTR ERVL 435 520 -1 194 328 90 33 chr10 25330111 25330233 -114986532 - L2 LINE L2 -2065 1249 1121 246 32 0 0 chr10 25330463 25330494 -114986271 + (T)n Simple_repeat Simple_repeat 1 31 0 944 150 0 0 chr10 25330494 25330627 -114986138 - AluSq/x SINE Alu -180 133 1 774 169 0 0 chr10 25330867 25330985 -114985780 + FLAM_C SINE Alu 1 118 -15 180 0 0 0 chr10 25330988 25331008 -114985757 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 404 207 134 177 chr10 25331159 25331391 -114985374 - MIR SINE MIR -21 241 20 3332 211 78 21 chr10 25331817 25332217 -114984548 + MER45B DNA AcHobo 4 380 -660 2700 197 50 4 chr10 25332217 25332735 -114984030 + MER34 LTR ERV1 1 542 0 3332 211 78 21 chr10 25332735 25333088 -114983677 + MER45B DNA AcHobo 380 800 -240 22 56 0 0 chr10 25333198 25333234 -114983531 + AT_rich Low_complexity Low_complexity 1 36 0 249 169 56 70 chr10 25333234 25333305 -114983460 - MER41B LTR ERV1 -121 514 445 734 81 0 0 chr10 25333324 25333410 -114983355 - AluSp/q SINE Alu -29 284 199 1519 207 0 17 chr10 25333751 25334050 -114982715 + AluSx SINE Alu 1 294 -18 526 178 0 11 chr10 25334198 25334288 -114982477 + AluJ SINE Alu 29 117 -195 1029 189 37 0 chr10 25334300 25334491 -114982274 + MER45B DNA AcHobo 842 1039 -1 950 210 46 25 chr10 25334867 25335105 -114981660 - MER90 LTR ERV1 -8 606 364 948 171 0 0 chr10 25335129 25335287 -114981478 - FRAM SINE Alu -1 175 18 607 304 33 8 chr10 25335294 25335537 -114981228 - MER90 LTR ERV1 -316 259 11 1979 165 0 0 chr10 25335570 25335873 -114980892 - AluJb SINE Alu -9 303 1 1010 172 5 30 chr10 25335941 25336165 -114980600 + AluJ SINE Alu 118 312 0 863 195 0 58 chr10 25336815 25336989 -114979776 + AluJo SINE Alu 22 185 -127 2556 151 38 31 chr10 25337123 25337548 -114979217 - MSTC LTR MaLR 0 428 1 2999 193 35 7 chr10 25337737 25338282 -114978483 - MER68 LTR ERV1 0 562 3 708 172 31 8 chr10 25338451 25338579 -114978186 + AluJ SINE Alu 1 131 -171 21 71 0 0 chr10 25339022 25339064 -114977701 + AT_rich Low_complexity Low_complexity 1 42 0 200 179 51 0 chr10 25339191 25339230 -114977535 + L2 LINE L2 3010 3050 -222 209 341 71 0 chr10 25339869 25339954 -114976811 + MIR SINE MIR 23 113 -95 387 303 67 0 chr10 25339954 25340073 -114976692 - L2 LINE L2 0 3313 3187 825 170 80 37 chr10 25340560 25340748 -114976017 + AluJ SINE Alu 117 312 0 1263 177 57 21 chr10 25340767 25340878 -114975887 + AluJb SINE Alu 9 115 -197 222 37 0 0 chr10 25340878 25340905 -114975860 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1263 177 57 21 chr10 25340905 25341075 -114975690 + AluJb SINE Alu 115 300 -12 29 47 0 0 chr10 25341364 25341407 -114975358 + GC_rich Low_complexity Low_complexity 1 43 0 216 196 0 0 chr10 25343177 25343223 -114973542 + T-rich Low_complexity Low_complexity 1 46 0 204 125 0 0 chr10 25343813 25343845 -114972920 + (TTA)n Simple_repeat Simple_repeat 3 34 0 771 139 7 44 chr10 25343899 25344036 -114972729 - FRAM SINE Alu -44 132 1 282 313 111 35 chr10 25344162 25344306 -114972459 + L2 LINE L2 2895 3049 -223 513 169 0 11 chr10 25344741 25344830 -114971935 + MER4A LTR ERV1 1 88 -576 1360 142 23 28 chr10 25344840 25345143 -114971622 + MER4A LTR ERV1 261 620 -44 2031 157 0 0 chr10 25345143 25345455 -114971310 - AluSx SINE Alu 0 312 1 3874 147 43 6 chr10 25345456 25346077 -114970688 - MER4D LTR ERV1 -259 644 1 183 100 0 0 chr10 25346198 25346228 -114970537 + (TTATA)n Simple_repeat Simple_repeat 2 31 0 1612 185 3 3 chr10 25346231 25346518 -114970247 - AluJo SINE Alu -25 287 1 21 0 0 0 chr10 25346520 25346541 -114970224 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr10 25346603 25346642 -114970123 + AT_rich Low_complexity Low_complexity 1 39 0 2284 86 0 7 chr10 25346844 25347173 -114969592 - AluY SINE Alu 0 311 1 231 114 0 0 chr10 25347456 25347491 -114969274 + (TC)n Simple_repeat Simple_repeat 1 35 0 389 295 94 13 chr10 25347800 25347949 -114968816 - MIR3 SINE MIR -11 197 37 425 285 108 0 chr10 25348339 25348497 -114968268 - MER112 DNA MER1_type -6 254 80 516 32 0 0 chr10 25348670 25348732 -114968033 + (TG)n Simple_repeat Simple_repeat 2 63 0 914 199 11 6 chr10 25348734 25348910 -114967855 - MER20 DNA MER1_type 0 219 43 1667 165 7 13 chr10 25348977 25349280 -114967485 - AluJo SINE Alu -11 301 1 1784 172 0 10 chr10 25349289 25349586 -114967179 - AluJo SINE Alu -13 299 6 2039 212 77 18 chr10 25349806 25350245 -114966520 - MER21B LTR ERV1 -11 852 388 583 183 66 36 chr10 25350291 25350428 -114966337 - MER21B LTR ERV1 -636 227 87 1527 180 0 4 chr10 25350429 25350684 -114966081 + AluJo SINE Alu 21 274 -38 366 257 81 15 chr10 25350943 25351079 -114965686 + L1ME LINE L1 5501 5645 -476 409 307 9 0 chr10 25351197 25351311 -114965454 - L2 LINE L2 -3 3269 3155 593 179 10 2 chr10 25351398 25351604 -114965161 + AluJo SINE Alu 21 275 -37 204 67 0 0 chr10 25351614 25351644 -114965121 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 832 200 31 19 chr10 25351819 25351979 -114964786 - AluJo SINE Alu -30 282 121 1386 167 19 68 chr10 25352038 25352349 -114964416 - AluJo SINE Alu -12 300 5 2489 87 0 0 chr10 25352368 25352678 -114964087 - AluSg SINE Alu 0 310 1 896 150 0 0 chr10 25353172 25353305 -114963460 + FLAM_C SINE Alu 1 133 0 341 247 41 21 chr10 25353456 25353553 -114963212 - MIR SINE MIR -11 251 153 372 212 182 30 chr10 25353554 25353686 -114963079 - MIR SINE MIR -64 198 47 321 218 173 23 chr10 25353795 25353928 -114962837 - MIR3 SINE MIR -23 185 33 254 234 0 0 chr10 25354019 25354066 -114962699 + FLAM_A SINE Alu 2 48 -85 1982 98 11 3 chr10 25354755 25355060 -114961705 - AluSx SINE Alu 0 307 1 22 56 0 0 chr10 25355440 25355476 -114961289 + AT_rich Low_complexity Low_complexity 1 36 0 282 300 0 0 chr10 25356013 25356103 -114960662 + MIR SINE MIR 63 152 -110 2175 133 0 0 chr10 25356260 25356562 -114960203 + AluSx SINE Alu 1 302 -10 1724 154 23 39 chr10 25357781 25358086 -114958679 - AluJo SINE Alu -12 300 1 246 272 22 54 chr10 25358309 25358401 -114958364 + LTR67 LTR ERVL 454 542 -15 2114 231 104 113 chr10 25358414 25358835 -114957930 - HAL1 LINE L1 -906 1601 1178 2130 127 27 0 chr10 25358835 25359134 -114957631 - AluSx SINE Alu -5 307 1 2114 231 104 113 chr10 25359134 25360189 -114956576 - HAL1 LINE L1 -1329 1178 139 234 0 0 0 chr10 25360296 25360322 -114956443 + (CAA)n Simple_repeat Simple_repeat 1 26 0 1993 137 7 10 chr10 25360341 25360648 -114956117 - AluSx SINE Alu -6 306 1 1553 182 0 52 chr10 25360885 25360999 -114955766 - AluJo SINE Alu -20 292 174 2914 77 8 0 chr10 25360999 25361351 -114955414 + THE1A LTR MaLR 1 355 0 1553 182 0 52 chr10 25361351 25361544 -114955221 - AluJo SINE Alu -138 174 1 525 340 44 6 chr10 25362638 25362867 -114953898 + MIR SINE MIR 4 237 -25 349 369 83 30 chr10 25362892 25363323 -114953442 + L2 LINE L2 2009 2462 -852 1192 186 68 79 chr10 25363964 25364330 -114952435 + MLT1A1 LTR MaLR 1 362 -3 1682 168 3 47 chr10 25364805 25365127 -114951638 - AluJb SINE Alu -4 308 1 1574 176 10 36 chr10 25365151 25365458 -114951307 - AluJo SINE Alu -13 299 1 209 250 36 83 chr10 25365854 25365917 -114950848 + L2 LINE L2 3193 3253 -19 1919 149 7 10 chr10 25365917 25366085 -114950680 - AluSx SINE Alu -11 301 133 2060 112 3 17 chr10 25366085 25366409 -114950356 - AluSc SINE Alu 0 309 1 1919 149 7 10 chr10 25366409 25366542 -114950223 - AluSx SINE Alu -179 133 1 209 250 36 83 chr10 25366542 25366562 -114950203 + L2 LINE L2 3253 3272 0 2093 89 17 3 chr10 25367283 25367574 -114949191 + AluSq SINE Alu 1 295 -18 273 312 25 64 chr10 25367813 25367970 -114948795 + MIR SINE MIR 112 262 0 719 210 12 42 chr10 25368086 25368253 -114948512 + FRAM SINE Alu 1 156 -20 1864 160 23 7 chr10 25368572 25368878 -114947887 + AluJo SINE Alu 1 311 -1 3028 171 23 37 chr10 25369165 25369586 -114947179 - Tigger5 DNA MER2_type 0 2323 1911 1649 122 191 7 chr10 25369586 25369890 -114946875 - MER46B DNA MER2_type -1 235 1 3028 171 23 37 chr10 25369890 25370069 -114946696 - Tigger5 DNA MER2_type -412 1911 1731 3147 130 16 36 chr10 25370079 25370123 -114946642 - L1PA16 LINE L1 0 6166 6123 1856 131 45 17 chr10 25370123 25370413 -114946352 + AluSx SINE Alu 1 298 -14 3147 130 16 36 chr10 25370413 25370869 -114945896 - L1PA16 LINE L1 -43 6123 5676 973 206 65 67 chr10 25370972 25371388 -114945377 - MER21A LTR ERV1 -422 441 1 1804 187 132 127 chr10 25371388 25371622 -114945143 + LTR8A LTR ERV1 42 273 -454 2083 117 0 4 chr10 25371622 25371923 -114944842 - AluSx SINE Alu 0 310 11 1804 187 132 127 chr10 25371923 25372370 -114944395 + LTR8A LTR ERV1 273 727 0 189 356 200 0 chr10 25372375 25372465 -114944300 - L2 LINE L2 -31 3241 3134 2090 152 18 3 chr10 25372494 25372829 -114943936 - LTR26B LTR ERV1 0 531 192 936 111 19 0 chr10 25372833 25372995 -114943770 + (TTTC)n Simple_repeat Simple_repeat 4 168 0 786 168 16 8 chr10 25372995 25373120 -114943645 - AluJb SINE Alu -52 260 135 1383 47 37 88 chr10 25373120 25373335 -114943430 - LTR26B LTR ERV1 -327 204 1 1975 137 6 51 chr10 25373387 25373701 -114943064 + AluSx SINE Alu 1 300 -12 3060 128 14 0 chr10 25373840 25374261 -114942504 + MSTA LTR MaLR 1 427 -1 1088 199 94 26 chr10 25374414 25374680 -114942085 - L1MB7 LINE L1 -19 6165 5882 783 207 0 21 chr10 25375324 25375464 -114941301 + AluJo SINE Alu 3 139 -173 1825 146 0 11 chr10 25375466 25375746 -114941019 + AluJo SINE Alu 11 287 -25 580 188 21 0 chr10 25375772 25375868 -114940897 + AluJ/FLAM SINE Alu 2 99 -213 886 161 0 19 chr10 25375868 25376023 -114940742 + AluJo/FRAM SINE Alu 161 312 0 1450 147 77 63 chr10 25376547 25376846 -114939919 + AluJb SINE Alu 1 303 -9 2296 90 0 3 chr10 25376941 25377240 -114939525 - AluSg SINE Alu -12 298 1 1409 187 41 41 chr10 25377409 25377703 -114939062 + MER50 LTR ERV1 418 711 -23 * 1993 142 72 70 chr10 25377699 25377785 -114938980 - MER34C LTR ERV1 -105 480 396 2172 124 0 3 chr10 25377785 25378092 -114938673 + AluSc SINE Alu 1 306 -3 1993 142 72 70 chr10 25378092 25378113 -114938652 - MER34C LTR ERV1 -189 396 377 2334 171 25 2 chr10 25378113 25378506 -114938259 + MER57A LTR ERV1 2 403 0 1993 142 72 70 chr10 25378506 25378840 -114937925 - MER34C LTR ERV1 -208 377 37 345 24 0 0 chr10 25378990 25379032 -114937733 + (TG)n Simple_repeat Simple_repeat 1 42 0 180 0 0 0 chr10 25379031 25379051 -114937714 + (CG)n Simple_repeat Simple_repeat 2 21 0 * 225 296 28 0 chr10 25379079 25379150 -114937615 - MER5B DNA MER1_type -99 79 7 3508 150 45 20 chr10 25379318 25379336 -114937429 - LTR26E LTR ERV1 -2 620 604 1599 152 117 72 chr10 25379336 25379765 -114937000 - LTR7 LTR ERV1 -2 448 1 3508 150 45 20 chr10 25379765 25380351 -114936414 - LTR26E LTR ERV1 -18 604 1 252 241 0 0 chr10 25380617 25380671 -114936094 - MLT1K LTR MaLR -3 585 532 468 165 0 13 chr10 25380796 25380875 -114935890 + MSTB LTR MaLR 1 78 -348 5652 72 15 0 chr10 25380875 25381556 -114935209 + LTR8 LTR ERV1 1 691 0 2465 69 0 0 chr10 25381799 25382103 -114934662 + AluY SINE Alu 1 304 -7 1720 173 30 7 chr10 25382119 25382414 -114934351 + AluJo SINE Alu 5 306 -6 809 257 126 5 chr10 25382414 25382628 -114934137 + MIR SINE MIR 22 261 -1 2045 132 0 10 chr10 25382671 25383007 -114933758 + AluSx SINE Alu 1 333 0 2044 124 0 3 chr10 25383015 25383342 -114933423 + AluSx SINE Alu 1 326 0 1819 113 106 3 chr10 25384121 25384404 -114932361 + AluSx SINE Alu 1 312 0 817 119 24 0 chr10 25384422 25384548 -114932217 + L1MA5A LINE L1 6165 6293 -4 3746 193 20 61 chr10 25384787 25384821 -114931944 - L1MB8 LINE L1 0 6178 6144 2404 74 0 7 chr10 25384821 25385120 -114931645 + AluSq SINE Alu 1 297 -16 3746 193 20 61 chr10 25385120 25385652 -114931113 - L1MB8 LINE L1 -34 6144 5591 2266 113 0 3 chr10 25385652 25385953 -114930812 + AluSx SINE Alu 1 300 -12 3746 193 20 61 chr10 25385953 25386110 -114930655 - L1MB8 LINE L1 -587 5591 5497 1061 120 78 51 chr10 25386110 25386327 -114930438 - L1MB8 LINE L1 -11 6167 5945 3746 193 20 61 chr10 25386327 25386518 -114930247 - L1MB8 LINE L1 -681 5497 5300 1510 207 3 10 chr10 25386520 25386834 -114929931 - AluJb SINE Alu 0 312 1 839 196 8 0 chr10 25386834 25386967 -114929798 - AluJo SINE Alu -177 135 2 297 161 65 0 chr10 25386978 25387040 -114929725 - L1MB8 LINE L1 -856 5290 5225 253 222 14 28 chr10 25387935 25388007 -114928758 + GA-rich Low_complexity Low_complexity 6 76 0 1648 156 3 63 chr10 25388422 25388737 -114928028 + AluJo SINE Alu 15 310 -2 2246 199 74 31 chr10 25389008 25389343 -114927422 - MER97a DNA MER1_type? -11 883 511 1841 116 48 24 chr10 25389343 25389636 -114927129 + AluSq SINE Alu 1 300 -13 2246 199 74 31 chr10 25389636 25389882 -114926883 - MER97a DNA MER1_type? -383 511 277 921 176 176 70 chr10 25389891 25390163 -114926602 + AluJo SINE Alu 8 308 -4 2184 109 0 32 chr10 25390181 25390492 -114926273 + AluSq SINE Alu 1 301 -12 558 259 119 13 chr10 25390492 25390728 -114926037 - MER97a DNA MER1_type? -613 281 21 1854 163 10 7 chr10 25390855 25391150 -114925615 - AluJo SINE Alu -11 301 6 1380 189 21 60 chr10 25391196 25391345 -114925420 + AluJo SINE Alu 1 135 -177 2239 115 3 0 chr10 25391345 25391641 -114925124 + AluSq SINE Alu 1 297 -16 1380 189 21 60 chr10 25391641 25391776 -114924989 + AluJo SINE Alu 135 274 -38 335 152 0 15 chr10 25391789 25391855 -114924910 + GA-rich Low_complexity Low_complexity 4 68 0 1431 157 0 0 chr10 25391867 25392084 -114924681 + AluJb SINE Alu 87 303 -9 2810 134 4 47 chr10 25392196 25392665 -114924100 + MER41B LTR ERV1 1 449 -186 1861 139 31 7 chr10 25392666 25392953 -114923812 + AluSx SINE Alu 1 294 -18 547 147 0 0 chr10 25392958 25393053 -114923712 + (GGGAA)n Simple_repeat Simple_repeat 3 97 0 204 289 0 26 chr10 25393163 25393239 -114923526 + MER5A DNA MER1_type 65 138 -51 2201 117 10 0 chr10 25393330 25393628 -114923137 + AluSg SINE Alu 1 301 -9 220 295 47 87 chr10 25393848 25393997 -114922768 + MER5A DNA MER1_type 47 189 0 367 284 55 24 chr10 25394006 25394133 -114922632 - MIR SINE MIR 0 262 132 1830 175 7 10 chr10 25394362 25394815 -114921950 + AluJo SINE Alu 1 452 0 300 283 42 58 chr10 25395532 25395652 -114921113 - MIR SINE MIR -142 120 3 2115 136 7 0 chr10 25395725 25396033 -114920732 + AluSg SINE Alu 1 310 0 1735 96 0 40 chr10 25396628 25396878 -114919887 + L1MA4A LINE L1 6045 6284 -19 520 358 118 0 chr10 25397017 25397313 -114919452 + L2 LINE L2 2520 2850 -464 2576 125 17 6 chr10 25397340 25397700 -114919065 - THE1B LTR MaLR 0 364 1 243 29 0 29 chr10 25398028 25398063 -114918702 + L1MA6 LINE L1 6114 6147 -153 1640 165 18 21 chr10 25398260 25398545 -114918220 + AluJo SINE Alu 1 284 -28 180 0 0 0 chr10 25398994 25399014 -114917751 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1863 171 3 7 chr10 25399327 25399625 -114917140 - AluJo SINE Alu -15 297 1 261 119 0 0 chr10 25399914 25399956 -114916809 + (A)n Simple_repeat Simple_repeat 1 42 0 1878 123 98 0 chr10 25400041 25400302 -114916463 + AluSg SINE Alu 1 292 -18 240 35 0 0 chr10 25400302 25400331 -114916434 + (CA)n Simple_repeat Simple_repeat 2 30 0 1878 123 98 0 chr10 25400331 25400346 -114916419 + AluSg SINE Alu 292 304 -6 385 336 89 21 chr10 25400577 25400812 -114915953 + L2 LINE L2 2252 2502 -812 315 312 42 38 chr10 25400828 25401042 -114915723 + L2 LINE L2 2775 2986 -286 906 200 29 54 chr10 25401195 25401400 -114915365 - MLT1B LTR MaLR 0 390 191 441 138 0 0 chr10 25401407 25401487 -114915278 + (GA)n Simple_repeat Simple_repeat 1 80 0 1796 128 54 27 chr10 25401525 25401822 -114914943 - AluJo SINE Alu -7 305 1 682 136 79 102 chr10 25401825 25401892 -114914873 - MLT1B LTR MaLR -217 173 106 2399 89 3 0 chr10 25401892 25402194 -114914571 - AluSq SINE Alu -10 303 1 682 136 79 102 chr10 25402194 25402303 -114914462 - MLT1B LTR MaLR -284 106 1 330 256 184 8 chr10 25402304 25402429 -114914336 + L2 LINE L2 3167 3313 0 701 222 46 75 chr10 25402474 25402713 -114914052 - MIR SINE MIR -22 240 9 27 0 0 0 chr10 25402751 25402778 -114913987 + AT_rich Low_complexity Low_complexity 1 27 0 503 278 95 27 chr10 25402785 25403048 -114913717 - L2 LINE L2 -2 3311 3031 2255 79 0 30 chr10 25404758 25405061 -114911704 + AluSp SINE Alu 1 294 -19 2109 186 180 36 chr10 25405061 25405679 -114911086 - MER39 LTR ERV1 0 707 1 2566 162 34 134 chr10 25405679 25405825 -114910940 + L1MB7 LINE L1 5189 5348 -836 1410 196 85 0 chr10 25405825 25406106 -114910659 + AluJb SINE Alu 4 308 -4 2566 162 34 134 chr10 25406106 25406465 -114910300 + L1MB7 LINE L1 5348 5586 -598 1927 152 0 34 chr10 25406465 25406788 -114909977 - AluSx SINE Alu 0 312 1 2566 162 34 134 chr10 25406788 25407093 -114909672 + L1MB7 LINE L1 5586 5920 -264 1722 171 0 24 chr10 25407504 25407802 -114908963 + AluJo SINE Alu 1 291 -21 2410 143 11 3 chr10 25408173 25408536 -114908229 - MER47A DNA MER2_type 0 366 1 811 143 9 0 chr10 25409656 25409768 -114906997 + AluJb SINE Alu 6 118 -194 967 220 0 0 chr10 25409872 25410031 -114906734 - FAM SINE Alu -16 159 1 430 289 78 32 chr10 25410086 25410456 -114906309 - L1MC4 LINE L1 -212 7830 7444 854 94 8 24 chr10 25410666 25410793 -114905972 + FRAM SINE Alu 22 146 -30 180 0 0 0 chr10 25410801 25410821 -114905944 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1686 137 48 11 chr10 25410834 25411126 -114905639 + AluJo SINE Alu 12 313 0 1182 185 69 0 chr10 25411411 25411627 -114905138 - MLT1A1 LTR MaLR -3 362 132 201 139 0 0 chr10 25411628 25411640 -114905125 + (GAAAA)n Simple_repeat Simple_repeat 3 14 -24 2172 122 23 0 chr10 25411640 25411944 -114904821 + AluSx SINE Alu 1 311 -1 201 139 0 0 chr10 25411944 25411967 -114904798 + (GAAAA)n Simple_repeat Simple_repeat 13 38 0 2263 218 98 73 chr10 25411968 25412322 -114904443 - MER21B LTR ERV1 -30 833 490 4673 66 2 0 chr10 25412322 25412880 -114903885 - L1PA5 LINE L1 -1 6153 5595 2263 218 98 73 chr10 25412880 25413055 -114903710 - MER21B LTR ERV1 -373 490 321 1685 180 21 0 chr10 25413055 25413338 -114903427 + AluJo SINE Alu 1 289 -23 2263 218 98 73 chr10 25413338 25413619 -114903146 - MER21B LTR ERV1 -542 321 1 711 158 0 25 chr10 25413626 25413746 -114903019 - MLT1A1 LTR MaLR -229 136 20 267 176 0 20 chr10 25413746 25413797 -114902968 - MSTA LTR MaLR 0 428 379 * 442 92 0 103 chr10 25413796 25413858 -114902907 - MLT1A1 LTR MaLR -287 78 26 1801 136 51 90 chr10 25413858 25414248 -114902517 - THE1C LTR MaLR 0 375 1 442 92 0 103 chr10 25414248 25414272 -114902493 - MLT1A1 LTR MaLR -339 26 1 2182 114 6 16 chr10 25414370 25414686 -114902079 - AluSq SINE Alu 0 313 1 423 94 0 0 chr10 25414789 25414842 -114901923 - Alu SINE Alu -257 53 1 1089 286 26 52 chr10 25414889 25415354 -114901411 - HAL1 LINE L1 -1509 998 546 26 30 0 0 chr10 25415377 25415410 -114901355 + AT_rich Low_complexity Low_complexity 1 33 0 814 191 0 0 chr10 25415438 25415585 -114901180 - FRAM SINE Alu -32 144 1 1451 228 53 36 chr10 25415586 25415998 -114900767 - HAL1 LINE L1 -1952 555 137 783 206 0 0 chr10 25416015 25416141 -114900624 - FLAM_A SINE Alu -6 127 2 2323 119 0 0 chr10 25416299 25416611 -114900154 - AluSx SINE Alu 0 312 1 226 367 43 0 chr10 25416640 25416779 -114899986 + L2 LINE L2 2552 2696 -618 402 369 25 25 chr10 25416860 25417058 -114899707 + L2 LINE L2 2875 3072 -200 29 0 0 0 chr10 25417408 25417437 -114899328 + AT_rich Low_complexity Low_complexity 1 29 0 1808 161 0 27 chr10 25417456 25417755 -114899010 + AluJo SINE Alu 6 296 -16 1812 151 39 3 chr10 25417880 25418190 -114898575 - AluSx SINE Alu 0 320 1 38 0 0 0 chr10 25419149 25419187 -114897578 + AT_rich Low_complexity Low_complexity 1 38 0 1949 158 3 3 chr10 25419632 25419943 -114896822 - AluJo SINE Alu 0 312 2 1927 164 0 0 chr10 25420641 25420939 -114895826 + AluJo SINE Alu 1 298 -14 200 247 72 113 chr10 25421096 25421193 -114895572 + MIR SINE MIR 82 174 -88 260 135 0 19 chr10 25421255 25421307 -114895458 + (CAT)n Simple_repeat Simple_repeat 2 52 0 593 247 54 12 chr10 25421609 25421775 -114894990 + MLT1I LTR MaLR 237 409 0 887 208 110 114 chr10 25421866 25422174 -114894591 - AluJo SINE Alu -4 308 2 781 192 0 8 chr10 25422624 25422749 -114894016 - FLAM_C SINE Alu -9 124 1 291 114 0 0 chr10 25422823 25422867 -114893898 + (GGA)n Simple_repeat Simple_repeat 3 46 0 1391 50 0 6 chr10 25422869 25423050 -114893715 + (GAA)n Simple_repeat Simple_repeat 1 180 0 555 269 21 14 chr10 25423441 25423582 -114893183 + MIR SINE MIR 9 150 -112 1754 177 3 13 chr10 25423660 25423960 -114892805 - AluJo SINE Alu -15 297 1 2179 97 0 53 chr10 25424826 25425146 -114891619 - AluY SINE Alu -8 303 1 604 148 26 35 chr10 25425151 25425266 -114891499 - FRAM SINE Alu 0 40 1 342 289 103 13 chr10 25425278 25425434 -114891331 - L1ME4a LINE L1 -6 6115 5946 1725 194 0 0 chr10 25425885 25426179 -114890586 - AluJo SINE Alu -18 294 1 2060 140 3 0 chr10 25426368 25426668 -114890097 + AluSx SINE Alu 1 301 -11 723 220 119 0 chr10 25427281 25427449 -114889316 - MER5A DNA MER1_type 0 189 2 2253 123 0 0 chr10 25427455 25427763 -114889002 - AluSx SINE Alu -2 310 3 360 264 43 61 chr10 25428170 25428333 -114888432 - MIR SINE MIR -71 191 32 205 283 0 17 chr10 25428382 25428442 -114888323 - L2 LINE L2 -1339 1975 1917 1311 158 19 142 chr10 25428556 25428879 -114887886 + AluJb SINE Alu 1 283 -19 334 94 31 0 chr10 25429924 25429988 -114886777 + (TA)n Simple_repeat Simple_repeat 2 67 0 189 0 0 0 chr10 25429988 25430009 -114886756 + (GA)n Simple_repeat Simple_repeat 2 22 0 1526 192 0 11 chr10 25430009 25430290 -114886475 - AluJo SINE Alu -34 278 1 373 159 43 0 chr10 25430596 25430665 -114886100 + MIR SINE MIR 105 176 -86 816 155 9 0 chr10 25430690 25430806 -114885959 - FLAM_C SINE Alu -25 118 2 304 224 30 0 chr10 25430807 25430874 -114885891 + MIR SINE MIR 167 235 -27 2209 117 13 0 chr10 25431266 25431564 -114885201 - AluSx SINE Alu -10 302 1 232 293 47 28 chr10 25431925 25432031 -114884734 + MIR3 SINE MIR 92 199 -9 2563 63 0 0 chr10 25432627 25432927 -114883838 - AluY SINE Alu -11 300 1 2324 119 15 0 chr10 25433571 25433907 -114882858 - L1PA13 LINE L1 -14 6149 5809 2074 122 3 20 chr10 25434344 25434640 -114882125 - AluSg SINE Alu -19 291 1 26 0 0 0 chr10 25434650 25434676 -114882089 + AT_rich Low_complexity Low_complexity 1 26 0 243 0 0 0 chr10 25434676 25434703 -114882062 + (CA)n Simple_repeat Simple_repeat 2 28 0 2051 141 0 0 chr10 25434926 25435225 -114881540 - AluSx SINE Alu -13 299 1 2175 80 0 17 chr10 25435327 25435663 -114881102 - AluY SINE Alu 0 331 1 745 257 148 43 chr10 25435669 25436300 -114880465 - L1ME3 LINE L1 -295 5850 5158 1359 149 0 14 chr10 25436301 25436515 -114880250 + AluJb SINE Alu 1 211 -101 1584 17 0 0 chr10 25436555 25436732 -114880033 + AluY SINE Alu 127 303 -8 310 305 18 24 chr10 25436808 25436975 -114879790 - L1ME3 LINE L1 -1078 5051 4886 705 234 80 48 chr10 25437014 25437365 -114879400 - L1ME3 LINE L1 -4863 1256 895 954 124 29 0 chr10 25437783 25437920 -114878845 - AluJb SINE Alu -171 141 1 286 358 55 22 chr10 25437922 25438196 -114878569 - L1ME3 LINE L1 -5710 409 127 6491 32 0 1 chr10 25438773 25439489 -114877276 - L1PA3 LINE L1 0 6155 5441 37131 40 113 2 chr10 25439589 25444584 -114872181 - L1P1 LINE L1 -579 5576 12 228 167 21 0 chr10 25444723 25444771 -114871994 + (CATATA)n Simple_repeat Simple_repeat 2 50 0 2555 177 133 4 chr10 25444931 25445418 -114871347 + MER44D DNA MER2_type 1 605 0 5944 80 47 3 chr10 25445537 25446284 -114870481 - LTR17 LTR ERV1 0 780 1 2035 116 0 27 chr10 25446395 25446688 -114870077 + AluSg1 SINE Alu 5 289 -20 212 357 123 56 chr10 25447047 25447299 -114869466 - L2 LINE L2 -4 3268 3000 672 160 5 43 chr10 25447447 25447634 -114869131 + CT-rich Low_complexity Low_complexity 1 180 0 2020 143 0 3 chr10 25447637 25447944 -114868821 - AluJb SINE Alu -6 306 1 1196 211 23 0 chr10 25449685 25449903 -114866862 + MER58A DNA MER1_type 2 224 0 916 268 121 16 chr10 25449914 25450228 -114866537 - MLT1I LTR MaLR 0 409 63 2421 159 32 25 chr10 25450244 25450652 -114866113 + LTR57 LTR ERVL 1 411 0 357 213 13 27 chr10 25450707 25450782 -114865983 - Tigger2a DNA MER2_type 0 434 361 691 169 52 70 chr10 25450782 25450932 -114865833 - L1PA16 LINE L1 -4 6162 6014 975 135 0 0 chr10 25450932 25451102 -114865663 + (TTCC)n Simple_repeat Simple_repeat 4 173 0 691 169 52 70 chr10 25451102 25451123 -114865642 - L1PA16 LINE L1 -152 6014 5994 1799 172 3 17 chr10 25451123 25451419 -114865346 - AluJb SINE Alu -20 292 1 4718 146 55 12 chr10 25451420 25452385 -114864380 - L1PA16 LINE L1 -125 6041 5018 2397 123 11 24 chr10 25452385 25452766 -114863999 - Tigger2a DNA MER2_type -58 376 1 707 219 273 44 chr10 25453077 25453392 -114863373 - LTR16A LTR ERVL -1 449 63 * 3182 143 9 28 chr10 25453390 25453930 -114862835 - MER34B LTR ERV1 -33 532 3 1133 289 51 28 chr10 25453944 25454377 -114862388 - L2 LINE L2 -2313 1001 559 244 366 12 0 chr10 25454447 25454529 -114862236 + MIR3 SINE MIR 117 199 -9 218 298 97 8 chr10 25454976 25455100 -114861665 + L2 LINE L2 3162 3296 -17 1757 159 17 21 chr10 25455101 25455390 -114861375 - AluJo SINE Alu -24 288 1 357 250 80 18 chr10 25456127 25456239 -114860526 + MIR3 SINE MIR 74 192 -16 2692 124 16 56 chr10 25456528 25456973 -114859792 - MSTA LTR MaLR -1 427 1 1113 237 85 75 chr10 25457124 25457320 -114859445 - MER34 LTR ERV1 0 542 349 672 240 0 0 chr10 25457320 25457445 -114859320 - FLAM_C SINE Alu -8 125 1 1113 237 85 75 chr10 25457445 25457780 -114858985 - MER34 LTR ERV1 -193 349 6 243 88 0 0 chr10 25457846 25457880 -114858885 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 294 50 0 0 chr10 25458490 25458530 -114858235 + (CA)n Simple_repeat Simple_repeat 1 40 0 4445 115 63 72 chr10 25458569 25459168 -114857597 - L1MC1 LINE L1 -86 6247 5657 1492 148 155 30 chr10 25459168 25459432 -114857333 + AluJb SINE Alu 1 297 -5 4445 115 63 72 chr10 25459432 25459661 -114857104 - L1MC1 LINE L1 -676 5657 5427 2324 97 0 0 chr10 25459744 25460034 -114856731 + AluSg SINE Alu 1 290 -20 184 348 84 39 chr10 25460179 25460334 -114856431 + L2 LINE L2 3097 3258 -14 404 259 0 0 chr10 25460415 25460500 -114856265 - MIR SINE MIR -148 114 30 321 287 8 31 chr10 25460923 25461052 -114855713 + MLT1L LTR MaLR 435 560 -55 921 166 0 13 chr10 25461626 25461783 -114854982 + FRAM SINE Alu 1 155 -21 21 0 0 0 chr10 25462480 25462501 -114854264 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr10 25462989 25463017 -114853748 + AT_rich Low_complexity Low_complexity 1 28 0 464 169 0 0 chr10 25464233 25464316 -114852449 + MLT1K LTR MaLR 506 588 0 274 264 41 66 chr10 25465052 25465173 -114851592 + L2 LINE L2 2141 2258 -1056 1296 216 0 8 chr10 25465175 25465430 -114851335 - AluJb SINE Alu -5 307 55 477 92 69 0 chr10 25465430 25465517 -114851248 + L1MA1 LINE L1 6106 6198 -104 751 161 7 13 chr10 25465628 25465777 -114850988 + L1MA1 LINE L1 6155 6302 0 345 127 63 16 chr10 25465793 25465856 -114850909 - AluJb SINE Alu -236 66 1 357 350 148 27 chr10 25465856 25466315 -114850450 + L2 LINE L2 2253 2824 -448 1798 156 0 49 chr10 25466315 25466454 -114850311 + AluJo SINE Alu 1 145 -167 2224 100 0 0 chr10 25466454 25466789 -114849976 + AluY SINE Alu 1 311 0 1798 156 0 49 chr10 25466789 25466977 -114849788 + AluJo SINE Alu 145 312 0 357 350 148 27 chr10 25466977 25467232 -114849533 + L2 LINE L2 2824 3047 -225 809 134 14 42 chr10 25467969 25468111 -114848654 - FLAM_C SINE Alu -1 142 5 796 259 102 13 chr10 25469322 25469558 -114847207 - MIR SINE MIR 0 262 6 253 360 54 37 chr10 25470088 25470385 -114846380 + L2 LINE L2 2065 2366 -948 23 54 0 0 chr10 25470474 25470511 -114846254 + AT_rich Low_complexity Low_complexity 1 37 0 434 255 111 74 chr10 25470538 25470754 -114846011 - MIR SINE MIR -36 226 3 255 264 106 103 chr10 25470933 25471206 -114845559 - LTR33 LTR ERVL -104 417 144 284 250 164 0 chr10 25474752 25474856 -114841909 + MIR SINE MIR 1 122 -86 1609 143 87 11 chr10 25475344 25475609 -114841156 - AluJb SINE Alu -27 285 1 23 54 0 0 chr10 25475612 25475649 -114841116 + AT_rich Low_complexity Low_complexity 1 37 0 925 261 99 35 chr10 25475651 25476114 -114840651 - HAL1 LINE L1 -13 2494 2002 28 0 0 0 chr10 25476322 25476350 -114840415 + AT_rich Low_complexity Low_complexity 1 28 0 402 265 68 61 chr10 25476509 25476656 -114840109 - HAL1 LINE L1 -651 1856 1709 2290 105 63 0 chr10 25476659 25476993 -114839772 + THE1A LTR MaLR 1 355 0 8566 135 19 113 chr10 25476993 25478737 -114838028 + THE1A-int LTR MaLR 1 1580 0 2532 81 32 3 chr10 25478737 25479082 -114837683 + THE1A LTR MaLR 1 355 0 2110 244 96 42 chr10 25479088 25479627 -114837138 - HAL1 LINE L1 -805 1702 1193 2442 93 0 0 chr10 25479627 25479938 -114836827 - AluY SINE Alu 0 311 1 2110 244 96 42 chr10 25479938 25480366 -114836399 - HAL1 LINE L1 -1314 1193 683 1652 191 0 27 chr10 25480483 25480781 -114835984 - AluJb SINE Alu -22 290 1 491 297 91 32 chr10 25481839 25481895 -114834870 + MIR SINE MIR 25 76 -186 2070 118 8 87 chr10 25481895 25482261 -114834504 + MER1B DNA MER1_type 1 337 0 491 297 91 32 chr10 25482261 25482423 -114834342 + MIR SINE MIR 76 256 -6 31 44 0 0 chr10 25482454 25482499 -114834266 + AT_rich Low_complexity Low_complexity 1 45 0 2222 113 0 22 chr10 25483109 25483427 -114833338 - AluSq SINE Alu -2 311 1 1215 62 0 6 chr10 25483836 25483996 -114832769 + AluY SINE Alu 139 297 -14 418 94 0 0 chr10 25484029 25484093 -114832672 + L1MA9 LINE L1 6087 6150 -162 345 109 0 0 chr10 25484247 25484302 -114832463 + (TG)n Simple_repeat Simple_repeat 2 56 0 263 317 195 6 chr10 25484605 25484769 -114831996 + MIR SINE MIR 3 197 -65 27 87 0 0 chr10 25484769 25484838 -114831927 + AT_rich Low_complexity Low_complexity 1 69 0 1954 165 58 31 chr10 25484957 25485485 -114831280 + MLT2A2 LTR ERVL 1 554 0 22 56 0 0 chr10 25485584 25485620 -114831145 + AT_rich Low_complexity Low_complexity 1 36 0 340 316 53 44 chr10 25486138 25486442 -114830323 - L1ME LINE L1 -395 5726 5416 1841 170 0 0 chr10 25486442 25486759 -114830006 - AluJo SINE Alu 0 317 1 340 316 53 44 chr10 25486759 25486795 -114829970 - L1ME LINE L1 -705 5416 5382 1381 195 9 46 chr10 25487124 25487472 -114829293 - L1MB8 LINE L1 -3 6175 5841 252 251 82 86 chr10 25487447 25487690 -114829075 - L1MB8 LINE L1 -1095 5051 4810 * 867 181 0 0 chr10 25487739 25487883 -114828882 - FRAM SINE Alu -32 144 1 444 291 26 62 chr10 25487884 25488056 -114828709 - L1MB8 LINE L1 -1396 4750 4585 2102 133 0 0 chr10 25488056 25488369 -114828396 - AluSx SINE Alu 0 313 1 444 291 26 62 chr10 25488369 25488422 -114828343 - L1MB8 LINE L1 -1561 4585 4532 1882 155 14 0 chr10 25488958 25489236 -114827529 - AluJo SINE Alu -30 282 1 629 272 87 5 chr10 25490964 25491148 -114825617 + MIR SINE MIR 32 230 -32 1562 176 0 65 chr10 25492004 25492310 -114824455 - AluJo SINE Alu -6 306 21 210 244 0 0 chr10 25492442 25492483 -114824282 + L2 LINE L2 3226 3266 -6 1807 162 81 8 chr10 25493141 25493536 -114823229 - L1MD1 LINE L1 0 6636 6213 932 167 7 0 chr10 25493536 25493686 -114823079 + FRAM SINE Alu 1 149 -27 7789 225 47 27 chr10 25493720 25495148 -114821617 - L1MD1 LINE L1 -458 6178 4780 1704 184 0 7 chr10 25495148 25495430 -114821335 - AluSx SINE Alu -32 280 1 7789 225 47 27 chr10 25495430 25495884 -114820881 - L1MD1 LINE L1 -1856 4780 4336 2139 134 3 0 chr10 25495884 25496183 -114820582 + AluSx SINE Alu 1 300 -12 7789 225 47 27 chr10 25496183 25497642 -114819123 - L1MD1 LINE L1 -2300 4336 2769 1776 148 64 15 chr10 25497656 25498062 -114818703 - L1MD1 LINE L1 -3890 2650 2225 2641 221 63 3 chr10 25498064 25498679 -114818086 + MER82 DNA MER2_type 1 652 -1 4195 208 75 24 chr10 25498688 25499198 -114817567 - L1MD1 LINE L1 -4477 2063 1580 252 0 0 0 chr10 25499198 25499226 -114817539 + (TA)n Simple_repeat Simple_repeat 2 29 0 4195 208 75 24 chr10 25499226 25499986 -114816779 - L1MD1 LINE L1 -4960 1580 656 201 162 0 0 chr10 25502260 25502297 -114814468 + A-rich Low_complexity Low_complexity 1 37 0 1565 185 0 73 chr10 25502348 25502662 -114814103 - AluJo SINE Alu -21 291 1 2373 74 0 26 chr10 25503248 25503560 -114813205 + AluY SINE Alu 1 304 -7 1866 199 8 8 chr10 25503862 25504238 -114812527 + L1M3e LINE L1 466 841 -6648 2493 259 19 34 chr10 25504436 25505357 -114811408 + L1M3e LINE L1 1885 2791 -4774 302 277 66 36 chr10 25505387 25505524 -114811241 + L1ME4a LINE L1 5366 5506 -615 712 312 23 0 chr10 25505536 25505754 -114811011 + MIR SINE MIR 33 255 -7 578 271 74 11 chr10 25505791 25506075 -114810690 + L1ME4a LINE L1 5527 5828 -293 924 42 0 0 chr10 25506096 25506214 -114810551 - L1PA4 LINE L1 -3 6152 6035 22 0 0 0 chr10 25506306 25506328 -114810437 + AT_rich Low_complexity Low_complexity 1 22 0 238 171 0 0 chr10 25506524 25506565 -114810200 - MLT1B LTR MaLR 0 390 350 829 190 13 25 chr10 25506591 25506749 -114810016 - FRAM SINE Alu -10 156 1 1530 168 21 4 chr10 25507272 25507552 -114809213 + MLT1B LTR MaLR 1 285 -105 1059 328 133 24 chr10 25508249 25509235 -114807530 - L2 LINE L2 -2 3270 2182 725 71 0 0 chr10 25509404 25509502 -114807263 - L1PB3 LINE L1 -1 6153 6056 759 240 76 26 chr10 25509864 25510380 -114806385 - MLT2F LTR ERVL -4 659 80 385 253 34 68 chr10 25512006 25512152 -114804613 - MLT1K LTR MaLR -1 587 447 297 0 0 0 chr10 25512331 25512364 -114804401 + (CA)n Simple_repeat Simple_repeat 1 33 0 846 263 60 101 chr10 25512590 25513192 -114803573 + MER77 LTR ERV1 24 601 -4 183 216 27 0 chr10 25513725 25513762 -114803003 + L2 LINE L2 3191 3228 -85 1801 233 69 67 chr10 25513764 25514417 -114802348 - MER76 LTR ERV -34 654 1 273 273 13 26 chr10 25514417 25514494 -114802271 + L2 LINE L2 3181 3256 -16 15401 63 17 1 chr10 25517308 25520145 -114796620 - L1PA6 LINE L1 0 6154 3288 32120 41 1 2 chr10 25520166 25525141 -114791624 - L1PA4 LINE L1 0 6155 1218 13125 132 10 19 chr10 25525268 25527519 -114789246 - L1PA6 LINE L1 -3905 2241 13 1769 149 14 0 chr10 25527776 25528065 -114788700 + L1PB4 LINE L1 5861 6153 -3 516 278 72 61 chr10 25528798 25529204 -114787561 - L1MC5 LINE L1 -37 7924 7507 2323 107 3 0 chr10 25529204 25529514 -114787251 - AluSp SINE Alu -2 311 1 516 278 72 61 chr10 25529514 25529714 -114787051 - L1MC5 LINE L1 -454 7507 7311 2683 36 0 0 chr10 25529718 25530025 -114786740 - AluY SINE Alu -4 307 1 216 310 0 0 chr10 25531112 25531170 -114785595 - MIR SINE MIR -139 123 66 2026 149 3 13 chr10 25531344 25531659 -114785106 - AluSx SINE Alu 0 312 1 1840 166 3 28 chr10 25531829 25532149 -114784616 + AluJb SINE Alu 1 312 0 890 137 0 30 chr10 25532841 25532972 -114783793 - FLAM_C SINE Alu -16 127 1 240 264 25 41 chr10 25534193 25534314 -114782451 + LTR67 LTR ERVL 428 546 -11 1769 160 19 41 chr10 25535805 25536123 -114780642 - AluJo SINE Alu -1 311 1 1891 158 3 13 chr10 25536432 25536730 -114780035 + AluJo SINE Alu 6 300 -12 476 263 56 25 chr10 25536916 25537076 -114779689 - MIR SINE MIR -1 261 97 865 165 0 0 chr10 25537741 25537874 -114778891 - FLAM_C SINE Alu 0 133 1 272 322 68 0 chr10 25537977 25538123 -114778642 - MER103 DNA DNA -8 158 3 2070 130 0 13 chr10 25538617 25538924 -114777841 - AluSx SINE Alu -9 303 1 1563 220 54 2 chr10 25540241 25540646 -114776119 - LTR16A LTR ERVL -1 449 24 1480 194 7 44 chr10 25541185 25541478 -114775287 - AluJo SINE Alu -30 282 1 770 228 72 5 chr10 25541537 25541730 -114775035 + MIR SINE MIR 47 252 -10 419 324 118 15 chr10 25541824 25542028 -114774737 - MIR SINE MIR -15 247 23 1471 67 5 0 chr10 25542076 25542270 -114774495 - L1PA7 LINE L1 0 6154 5960 3572 118 5 5 chr10 25543727 25544279 -114772486 - L1PA14 LINE L1 -1 6160 5609 223 133 17 17 chr10 25545390 25545450 -114771315 + (TA)n Simple_repeat Simple_repeat 1 60 0 332 291 82 72 chr10 25545814 25546133 -114770632 + L1ME3A LINE L1 5849 6170 0 2220 114 3 0 chr10 25546200 25546499 -114770266 - AluSx SINE Alu -12 300 1 358 256 0 0 chr10 25546630 25546708 -114770057 - MIR SINE MIR -17 245 168 1772 167 21 15 chr10 25546720 25547056 -114769709 - MER2 DNA MER2_type 0 345 8 272 270 183 22 chr10 25547301 25547438 -114769327 - L2 LINE L2 0 3272 3114 200 385 28 0 chr10 25547893 25548002 -114768763 + L2 LINE L2 3160 3271 -42 2094 135 0 0 chr10 25548989 25549286 -114767479 + AluSx SINE Alu 1 297 -15 292 189 0 40 chr10 25549627 25549701 -114767064 - Charlie7 DNA MER1_type -2507 105 35 1671 170 3 10 chr10 25550229 25550517 -114766248 - AluJo SINE Alu -26 286 1 697 221 25 65 chr10 25550892 25551038 -114765727 + MIR SINE MIR 16 153 -109 818 176 0 15 chr10 25551038 25551169 -114765596 + FLAM_C SINE Alu 1 129 -4 697 221 25 65 chr10 25551169 25551221 -114765544 + MIR SINE MIR 153 206 -56 216 274 16 16 chr10 25551368 25551430 -114765335 + L2 LINE L2 3155 3216 -56 * 539 208 39 15 chr10 25551426 25551556 -114765209 - MIR SINE MIR -91 171 39 439 251 86 23 chr10 25551747 25551922 -114764843 - MIR SINE MIR -57 205 20 27 0 0 0 chr10 25552237 25552264 -114764501 + AT_rich Low_complexity Low_complexity 1 27 0 2335 72 13 0 chr10 25553318 25553624 -114763141 + AluY SINE Alu 1 310 -1 284 231 0 0 chr10 25553690 25553742 -114763023 - MER5B DNA MER1_type -124 54 3 1904 142 61 17 chr10 25554120 25554479 -114762286 + THE1C LTR MaLR 1 375 0 2070 145 0 3 chr10 25554585 25554889 -114761876 + AluSx SINE Alu 1 303 -9 286 291 126 28 chr10 25555737 25556095 -114760670 + L1ME LINE L1 3493 3885 -2261 2088 120 10 0 chr10 25556476 25556768 -114759997 + AluSx SINE Alu 1 295 -17 334 351 18 7 chr10 25556828 25557113 -114759652 + L1ME LINE L1 4522 4809 -1337 38 0 0 0 chr10 25557474 25557512 -114759253 + AT_rich Low_complexity Low_complexity 1 38 0 695 228 14 7 chr10 25557562 25557707 -114759058 - FRAM SINE Alu -30 146 1 379 295 110 28 chr10 25557752 25558152 -114758613 + L1ME LINE L1 5319 5751 -370 329 181 0 110 chr10 25558434 25558561 -114758204 + L1M4 LINE L1 5195 5307 -839 4905 243 57 53 chr10 25558590 25560420 -114756345 + L1M4 LINE L1 17 1838 -4806 2189 129 0 0 chr10 25560420 25560715 -114756050 + AluSg SINE Alu 1 295 -15 4905 243 57 53 chr10 25560715 25561053 -114755712 + L1M4 LINE L1 1838 2173 -4471 1996 161 0 0 chr10 25561053 25561352 -114755413 - AluSx SINE Alu -13 299 1 4905 243 57 53 chr10 25561352 25561583 -114755182 + L1M4 LINE L1 2173 2402 -4242 4620 138 8 25 chr10 25561583 25562387 -114754378 - L1MA6 LINE L1 0 6300 5511 4905 243 57 53 chr10 25562387 25563276 -114753489 + L1M4 LINE L1 2402 3331 -3313 859 75 8 0 chr10 25563350 25563470 -114753295 + L1PB2 LINE L1 6028 6148 -3 281 135 19 0 chr10 25563546 25563598 -114753167 + C-rich Low_complexity Low_complexity 3 55 0 2050 120 0 0 chr10 25563603 25563878 -114752887 - AluSx SINE Alu -37 275 1 292 296 104 27 chr10 25563879 25564329 -114752436 - L1MDa LINE L1 -3200 2929 2445 365 267 10 0 chr10 25564472 25564573 -114752192 - L1MC4 LINE L1 -13 8029 7928 240 295 0 0 chr10 25564606 25564667 -114752098 + A-rich Low_complexity Low_complexity 3 63 0 273 234 105 60 chr10 25564703 25564938 -114751827 - L1MDa LINE L1 -3906 2223 2020 2055 108 22 4 chr10 25565020 25565298 -114751467 + AluSx SINE Alu 1 283 -29 371 301 42 54 chr10 25565413 25565672 -114751093 - L1MDa LINE L1 -5597 522 267 234 306 12 12 chr10 25566316 25566401 -114750364 - L1MDa LINE L1 -6034 85 1 236 175 0 0 chr10 25566430 25566470 -114750295 + MIR SINE MIR 77 116 -146 974 228 22 100 chr10 25566724 25567017 -114749748 - MER102b DNA MER1_type -1091 337 75 2009 147 0 6 chr10 25567017 25567329 -114749436 + AluSx SINE Alu 1 310 -2 974 228 22 100 chr10 25567329 25567394 -114749371 - MER102b DNA MER1_type -1353 75 7 1549 215 57 16 chr10 25568345 25568731 -114748034 - MLT1C LTR MaLR -1 466 65 1084 169 0 27 chr10 25568737 25568920 -114747845 + Tigger4(Zombi) DNA MER2_type 1 178 -2553 13162 123 35 15 chr10 25568921 25571011 -114745754 + Tigger4(Zombi) DNA MER2_type 564 2694 -37 259 123 88 35 chr10 25571012 25571069 -114745696 - MLT1C LTR MaLR -407 60 1 261 200 33 78 chr10 25571240 25571330 -114745435 - MIR3 SINE MIR -4 204 119 24 67 0 0 chr10 25571442 25571487 -114745278 + AT_rich Low_complexity Low_complexity 1 45 0 1449 253 58 20 chr10 25572060 25572300 -114744465 + L1MC4 LINE L1 7437 7666 -376 2048 134 0 0 chr10 25572300 25572592 -114744173 - AluJb SINE Alu -19 293 2 1449 253 58 20 chr10 25572592 25572797 -114743968 + L1MC4 LINE L1 7666 7899 -143 494 298 79 59 chr10 25573067 25573378 -114743387 - L1M4 LINE L1 -1730 4416 4113 477 110 44 11 chr10 25573378 25573469 -114743296 - L1MA5A LINE L1 -5 6292 6199 494 298 79 59 chr10 25573469 25573959 -114742806 - L1M4 LINE L1 -2033 4113 3599 1768 133 4 0 chr10 25574421 25574677 -114742088 + AluSg SINE Alu 38 294 -16 27 62 0 0 chr10 25574740 25574788 -114741977 + AT_rich Low_complexity Low_complexity 1 48 0 342 301 82 20 chr10 25575087 25575283 -114741482 - L1MC4a LINE L1 -1933 5875 5668 264 288 0 14 chr10 25575283 25575356 -114741409 - LTR33A LTR ERVL 0 523 452 1607 320 17 10 chr10 25576156 25576749 -114740016 - ERVL LTR ERVL -382 5382 4786 545 289 111 17 chr10 25576837 25577072 -114739693 - ERVL LTR ERVL -1103 4661 4405 1722 173 36 19 chr10 25577730 25578089 -114738676 - MLT1A1 LTR MaLR 0 365 1 207 186 0 0 chr10 25578530 25578573 -114738192 + (CATATA)n Simple_repeat Simple_repeat 1 43 0 31 0 0 0 chr10 25578631 25578662 -114738103 + AT_rich Low_complexity Low_complexity 1 31 0 1810 78 0 12 chr10 25579957 25580200 -114736565 + AluY SINE Alu 72 311 0 264 291 127 37 chr10 25580264 25580398 -114736367 - MIR3 SINE MIR -38 170 25 383 235 20 20 chr10 25581306 25581404 -114735361 + MER3 DNA MER1_type 5 102 -107 1622 199 3 16 chr10 25581416 25581723 -114735042 + AluJb SINE Alu 1 303 -9 2725 129 65 17 chr10 25581727 25581817 -114734948 + L1MA3 LINE L1 5760 5844 -461 1814 148 75 31 chr10 25581817 25582176 -114734589 + THE1C LTR MaLR 1 375 0 2725 129 65 17 chr10 25582176 25582606 -114734159 + L1MA3 LINE L1 5844 6305 0 416 134 85 0 chr10 25582626 25582708 -114734057 + MER3 DNA MER1_type 104 192 -17 263 327 200 32 chr10 25583381 25583907 -114732858 - L2 LINE L2 -2441 873 260 217 316 163 0 chr10 25586193 25586291 -114730474 + L2 LINE L2 3155 3268 -4 3399 144 61 15 chr10 25586990 25587579 -114729186 + Ricksha DNA DNA 9 624 -1422 845 119 0 30 chr10 25587584 25587718 -114729047 + Ricksha DNA DNA 1057 1186 -2060 1774 144 0 0 chr10 25587838 25588095 -114728670 + AluSq SINE Alu 1 257 -56 362 258 197 1 chr10 25588316 25588624 -114728141 + LTR16A LTR ERVL 52 450 0 2043 153 7 0 chr10 25589009 25589317 -114727448 - AluSx SINE Alu 0 312 3 225 289 0 0 chr10 25589708 25589760 -114727005 + L1ME3 LINE L1 601 652 -5467 210 172 52 0 chr10 25589800 25589858 -114726907 + A-rich Low_complexity Low_complexity 3 63 0 21 0 0 0 chr10 25589945 25589966 -114726799 + AT_rich Low_complexity Low_complexity 1 21 0 379 365 47 41 chr10 25590090 25590430 -114726335 + HAL1 LINE L1 1227 1568 -939 1742 142 68 4 chr10 25590457 25590738 -114726027 + AluSx SINE Alu 13 311 -1 543 266 184 26 chr10 25591308 25592000 -114724765 + L1ME3 LINE L1 2872 3672 -2457 392 204 23 11 chr10 25592122 25592210 -114724555 - MER74A LTR ERVL 0 558 470 765 137 8 0 chr10 25592234 25592351 -114724414 - MER74A LTR ERVL -440 118 1 383 268 109 22 chr10 25592357 25592495 -114724270 + HsTC2b DNA Tc2 66 215 -700 341 280 156 32 chr10 25592559 25592777 -114723988 + L1ME3 LINE L1 4999 5243 -886 477 238 82 105 chr10 25592804 25592952 -114723813 + L1ME3 LINE L1 5315 5465 -680 1770 150 7 31 chr10 25592952 25593245 -114723520 - AluJo SINE Alu -22 290 5 477 238 82 105 chr10 25593245 25593411 -114723354 + L1ME3 LINE L1 5465 5622 -523 1076 241 93 21 chr10 25593482 25593814 -114722951 - LTR16B LTR ERVL -2 462 107 347 312 64 0 chr10 25593921 25594117 -114722648 + L1ME3 LINE L1 5725 5934 -219 42666 52 4 3 chr10 25594129 25600275 -114716490 - L1PA4 LINE L1 0 6155 1 24 85 0 0 chr10 25600848 25600907 -114715858 + AT_rich Low_complexity Low_complexity 1 59 0 28 0 0 0 chr10 25601743 25601771 -114714994 + AT_rich Low_complexity Low_complexity 1 28 0 1447 267 99 54 chr10 25601860 25602782 -114713983 - HAL1 LINE L1 -112 2395 1433 23 0 0 0 chr10 25602782 25602805 -114713960 + AT_rich Low_complexity Low_complexity 1 23 0 696 286 83 67 chr10 25603148 25603596 -114713169 - HAL1 LINE L1 -1504 1003 549 2131 251 64 16 chr10 25603609 25604247 -114712518 - L1ME1 LINE L1 -18 6217 5549 391 210 59 8 chr10 25604257 25604376 -114712389 - L1ME1 LINE L1 -1433 4782 4658 5944 265 109 44 chr10 25604525 25605874 -114710891 + L1MEc LINE L1 35 1295 -4920 2331 80 0 7 chr10 25605874 25606173 -114710592 + AluY SINE Alu 1 297 -14 5944 265 109 44 chr10 25606173 25606385 -114710380 + L1MEc LINE L1 1295 1492 -4723 1480 184 9 57 chr10 25606385 25606701 -114710064 + AluJo SINE Alu 12 312 0 5944 265 109 44 chr10 25606701 25607302 -114709463 + L1MEc LINE L1 1492 2053 -4162 2366 121 49 0 chr10 25607302 25607667 -114709098 - L1PA16 LINE L1 -9 6157 5775 5944 265 109 44 chr10 25607667 25607842 -114708923 + L1MEc LINE L1 2053 2215 -4000 7327 29 17 1 chr10 25607842 25609150 -114707615 + L1PA3 LINE L1 4830 6152 -3 5944 265 109 44 chr10 25609150 25611079 -114705686 + L1MEc LINE L1 2215 4584 -1631 340 44 0 0 chr10 25611197 25611242 -114705523 + L1PA16 LINE L1 6112 6156 -10 801 234 90 80 chr10 25611256 25611667 -114705098 - L1ME1 LINE L1 -4039 2357 1943 285 75 0 0 chr10 25612570 25612610 -114704155 + (CA)n Simple_repeat Simple_repeat 1 40 0 2071 147 46 0 chr10 25612616 25612964 -114703801 - MER47A DNA MER2_type 0 366 3 1678 177 49 57 chr10 25613041 25613409 -114703356 - MLT1A1 LTR MaLR 0 365 1 1116 205 77 48 chr10 25613427 25613468 -114703297 + MER76 LTR ERV 1 39 -649 2242 82 0 7 chr10 25613468 25613760 -114703005 - AluY SINE Alu -21 290 1 1116 205 77 48 chr10 25613760 25614280 -114702485 + MER76 LTR ERV 39 667 -21 2336 71 0 14 chr10 25615042 25615337 -114701428 + AluY SINE Alu 10 300 -11 252 231 0 0 chr10 25618779 25618857 -114697908 + (TA)n Simple_repeat Simple_repeat 1 78 0 480 35 0 0 chr10 25619258 25619316 -114697449 + (TG)n Simple_repeat Simple_repeat 1 58 0 234 245 20 0 chr10 25619764 25619813 -114696952 + polypyrimidine Low_complexity Low_complexity 1 50 0 230 244 0 26 chr10 25619827 25619905 -114696860 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 465 300 93 20 chr10 25619985 25620135 -114696630 - L2 LINE L2 -4 3268 3108 229 333 43 26 chr10 25624107 25624224 -114692541 - L2 LINE L2 -1 3271 3153 308 273 91 0 chr10 25624350 25624460 -114692305 + L2 LINE L2 3153 3272 0 1855 155 7 30 chr10 25625165 25625468 -114691297 + AluJb SINE Alu 1 296 -16 291 212 106 47 chr10 25626176 25626261 -114690504 - MIR3 SINE MIR -35 173 84 1015 187 4 3 chr10 25626364 25626601 -114690164 - AluJb SINE Alu -14 298 2 316 233 110 7 chr10 25626883 25626996 -114689769 - MIR3 SINE MIR -2 206 78 253 327 19 28 chr10 25627091 25627198 -114689567 + MIR SINE MIR 22 127 -135 940 199 0 0 chr10 25627199 25627365 -114689400 - FRAM SINE Alu 0 166 1 407 288 18 68 chr10 25627389 25627552 -114689213 + L2 LINE L2 3159 3313 0 1443 314 70 10 chr10 25627694 25628593 -114688172 + L2 LINE L2 2360 3313 0 418 293 16 0 chr10 25628589 25628712 -114688053 + MIR SINE MIR 138 262 0 * 387 0 0 0 chr10 25630243 25630286 -114686479 + (CA)n Simple_repeat Simple_repeat 2 44 0 23 54 0 0 chr10 25630382 25630419 -114686346 + AT_rich Low_complexity Low_complexity 1 37 0 1198 60 7 0 chr10 25630421 25630570 -114686195 - AluY SINE Alu -129 182 33 434 262 105 47 chr10 25631071 25631243 -114685522 + MER63A DNA MER1_type 29 210 0 206 214 24 0 chr10 25631283 25631325 -114685440 + CT-rich Low_complexity Low_complexity 3 45 0 502 237 68 96 chr10 25631359 25631578 -114685187 - MER58C DNA MER1_type -2 213 1 487 223 18 12 chr10 25631623 25631789 -114684976 + (TA)n Simple_repeat Simple_repeat 1 167 0 5828 195 49 25 chr10 25631851 25634336 -114682429 - L1MB7 LINE L1 0 6184 3641 1579 149 67 0 chr10 25635033 25635315 -114681450 + L1PB4 LINE L1 5854 6154 -2 1998 146 44 39 chr10 25635547 25635909 -114680856 - THE1B LTR MaLR 0 364 1 317 325 32 32 chr10 25635957 25636114 -114680651 - MIR3 SINE MIR -49 159 3 208 304 215 18 chr10 25636146 25636451 -114680314 - L2 LINE L2 -338 2975 2615 1744 180 0 16 chr10 25636822 25637133 -114679632 + AluJo SINE Alu 5 310 -2 234 286 39 26 chr10 25637332 25637409 -114679356 - MIR SINE MIR -108 154 77 240 244 24 12 chr10 25637624 25637706 -114679059 + (TGAA)n Simple_repeat Simple_repeat 1 83 0 1016 174 42 46 chr10 25638755 25638996 -114677769 + MLT1D LTR MaLR 6 245 -260 478 179 120 0 chr10 25639061 25639178 -114677587 + MLT1D LTR MaLR 370 500 -5 408 333 94 44 chr10 25641427 25641832 -114674933 + L2 LINE L2 2209 2633 -681 456 238 21 28 chr10 25641838 25641981 -114674784 - LTR16A1 LTR ERVL 0 457 316 210 224 105 79 chr10 25642091 25642167 -114674598 + L2 LINE L2 2899 2976 -338 1935 166 15 100 chr10 25642274 25642755 -114674010 - LTR47B LTR ERVL 0 443 4 23 0 0 0 chr10 25643283 25643306 -114673459 + AT_rich Low_complexity Low_complexity 1 23 0 342 282 19 0 chr10 25644904 25645007 -114671758 - MIR SINE MIR 0 262 158 495 108 0 36 chr10 25645674 25645757 -114671008 - MADE1 DNA Mariner 0 80 1 328 130 29 0 chr10 25646398 25646467 -114670298 + GA-rich Low_complexity Low_complexity 1 71 0 2720 147 18 74 chr10 25646557 25646877 -114669888 + L1MB5 LINE L1 5578 5914 -260 1886 162 0 3 chr10 25646877 25647199 -114669566 + AluJo SINE Alu 3 312 0 2720 147 18 74 chr10 25647199 25647229 -114669536 + L1MB5 LINE L1 5914 5944 -230 2046 95 15 4 chr10 25647229 25647502 -114669263 + AluSc SINE Alu 17 292 -17 2720 147 18 74 chr10 25647502 25647774 -114668991 + L1MB5 LINE L1 5944 6166 -8 21 36 0 0 chr10 25647910 25647938 -114668827 + AT_rich Low_complexity Low_complexity 1 28 0 2103 132 26 59 chr10 25649508 25649964 -114666801 + L1MB3 LINE L1 5736 6176 -7 268 286 167 0 chr10 25650276 25650360 -114666405 - MIR SINE MIR -122 140 43 255 241 46 11 chr10 25650586 25650673 -114666092 - MLT1L LTR MaLR -353 262 173 23 0 0 0 chr10 25651007 25651030 -114665735 + AT_rich Low_complexity Low_complexity 1 23 0 2426 151 31 24 chr10 25651395 25651820 -114664945 - MSTA LTR MaLR 0 428 1 30 0 0 0 chr10 25653934 25653964 -114662801 + AT_rich Low_complexity Low_complexity 1 30 0 2940 33 10 0 chr10 25653982 25654371 -114662394 + L1P LINE L1 4994 5386 -760 1753 117 0 22 chr10 25654556 25654830 -114661935 - AluY SINE Alu -4 307 40 2259 108 3 10 chr10 25654859 25655156 -114661609 + AluSx SINE Alu 3 297 -15 21 36 0 0 chr10 25655179 25655207 -114661558 + AT_rich Low_complexity Low_complexity 1 28 0 6751 62 19 0 chr10 25655230 25656262 -114660503 - L1PA7 LINE L1 -6 6148 5131 440 51 0 0 chr10 25656263 25656322 -114660443 + L1PA7 LINE L1 5061 5119 -1027 4638 187 69 18 chr10 25656322 25657486 -114659279 - L1MC1 LINE L1 -5 6328 5225 2312 82 7 0 chr10 25657486 25657779 -114658986 - AluY SINE Alu -16 295 1 4638 187 69 18 chr10 25657779 25658641 -114658124 - L1MC1 LINE L1 -1108 5225 4078 2305 175 7 12 chr10 25658663 25659240 -114657525 - MER72 LTR ERV1 -28 694 82 2102 221 45 22 chr10 25659241 25659844 -114656921 - L1MC1 LINE L1 -2057 4089 3473 541 248 57 52 chr10 25659860 25660090 -114656675 - MER2 DNA MER2_type -1 344 114 864 242 49 0 chr10 25660091 25660397 -114656368 - L1MC1 LINE L1 -2860 3286 2966 2018 130 3 0 chr10 25660593 25660878 -114655887 - AluSx SINE Alu -14 298 13 25 31 0 0 chr10 25660906 25660938 -114655827 + AT_rich Low_complexity Low_complexity 1 32 0 1050 221 105 3 chr10 25660973 25661267 -114655498 + MER2 DNA MER2_type 11 334 -11 24 32 0 0 chr10 25661636 25661667 -114655098 + AT_rich Low_complexity Low_complexity 1 31 0 2132 125 0 16 chr10 25661863 25662166 -114654599 - AluSx SINE Alu -14 298 1 291 257 64 105 chr10 25662227 25662383 -114654382 - L1ME3A LINE L1 -232 5938 5777 1189 109 15 25 chr10 25662383 25662584 -114654181 - L1PA13 LINE L1 -5 6158 5960 291 257 64 105 chr10 25662584 25662769 -114653996 - L1ME3A LINE L1 -393 5777 5611 932 104 0 0 chr10 25662805 25662953 -114653812 - AluSg/x SINE Alu 0 303 156 574 274 19 14 chr10 25662953 25663341 -114653424 - L1ME3A LINE L1 -603 5567 5177 410 228 32 51 chr10 25663342 25663500 -114653265 - L1MA10 LINE L1 -4 6330 6176 * 690 211 22 28 chr10 25663477 25663657 -114653108 - L1ME LINE L1 -471 5695 5517 616 270 68 73 chr10 25663652 25664112 -114652653 - L1ME3A LINE L1 -953 5193 4737 * 1758 176 0 10 chr10 25664112 25664402 -114652363 - AluJo SINE Alu -25 287 1 616 270 68 73 chr10 25664402 25664734 -114652031 - L1ME3A LINE L1 -1409 4737 4405 2146 95 18 3 chr10 25664786 25665070 -114651695 - AluSc SINE Alu -21 288 1 2106 273 70 38 chr10 25666316 25666589 -114650176 - L2 LINE L2 0 3313 3050 2026 158 52 3 chr10 25666589 25666957 -114649808 + L1PB4 LINE L1 5757 6142 -14 2106 273 70 38 chr10 25666957 25667802 -114648963 - L2 LINE L2 -263 3050 2157 1703 189 11 3 chr10 25667951 25668236 -114648529 - AluJo SINE Alu -25 287 1 1056 115 0 0 chr10 25668370 25668509 -114648256 + AluSg/x SINE Alu 149 287 -25 211 229 16 33 chr10 25668912 25668973 -114647792 + CT-rich Low_complexity Low_complexity 4 63 0 483 316 143 23 chr10 25669501 25669852 -114646913 - L2 LINE L2 -553 2761 2369 360 280 49 35 chr10 25669855 25669929 -114646836 - L2 LINE L2 -1251 2063 1992 2645 147 7 16 chr10 25669929 25670359 -114646406 - MSTB LTR MaLR 0 426 1 360 280 49 35 chr10 25670359 25670427 -114646338 - L2 LINE L2 -1322 1992 1919 216 365 51 26 chr10 25671494 25671650 -114645115 - L2 LINE L2 -181 3091 2932 1497 231 12 34 chr10 25672259 25672675 -114644090 - MLT2D LTR ERVL -7 407 1 359 236 0 0 chr10 25672785 25672857 -114643908 + L2 LINE L2 3242 3313 0 2303 147 24 22 chr10 25673608 25673987 -114642778 + MSTB1 LTR MaLR 15 397 -35 2463 81 0 0 chr10 25673987 25674295 -114642470 - AluY SINE Alu -2 309 2 2303 147 24 22 chr10 25674295 25674330 -114642435 + MSTB1 LTR MaLR 397 430 -2 186 369 50 30 chr10 25675708 25675906 -114640859 + L2 LINE L2 200 401 -2913 378 330 17 8 chr10 25675907 25676025 -114640740 + L2 LINE L2 3153 3271 -1 496 211 12 23 chr10 25676025 25676196 -114640569 + GA-rich Low_complexity Low_complexity 1 169 0 319 371 88 17 chr10 25676240 25676593 -114640172 + L2 LINE L2 444 821 -2493 737 345 124 16 chr10 25676665 25676989 -114639776 + L2 LINE L2 1782 2070 -1244 2133 111 17 0 chr10 25676989 25677278 -114639487 - AluSc SINE Alu -14 295 2 737 345 124 16 chr10 25677278 25677937 -114638828 + L2 LINE L2 2070 2871 -443 193 274 179 34 chr10 25678167 25678284 -114638481 + L2 LINE L2 3180 3313 0 494 70 14 0 chr10 25678508 25678579 -114638186 + (TTCCC)n Simple_repeat Simple_repeat 4 75 0 1882 166 0 6 chr10 25678588 25678901 -114637864 - AluSx SINE Alu 0 312 2 445 275 75 44 chr10 25680434 25680594 -114636171 - MIR SINE MIR -40 222 58 261 340 107 55 chr10 25681467 25681758 -114635007 + L2 LINE L2 2958 3263 -9 241 344 22 11 chr10 25682921 25683011 -114633754 + MIR SINE MIR 35 125 -83 1741 171 0 43 chr10 25683516 25683838 -114632927 - AluJo SINE Alu -4 308 1 23 20 8 0 chr10 25684231 25684301 -114632464 + AT_rich Low_complexity Low_complexity 1 30 0 3875 198 50 26 chr10 25684323 25685081 -114631684 - L1MB3 LINE L1 -8 6175 5437 2275 122 0 0 chr10 25685081 25685393 -114631372 - AluSx SINE Alu 0 312 1 3875 198 50 26 chr10 25685393 25686142 -114630623 - L1MB3 LINE L1 -746 5437 4635 303 214 0 0 chr10 25686181 25686251 -114630514 + CT-rich Low_complexity Low_complexity 1 70 0 1716 158 0 0 chr10 25686251 25686511 -114630254 - AluSq SINE Alu -1 312 53 2893 180 30 2 chr10 25686511 25687155 -114629610 - L1MB3 LINE L1 -1504 4642 3981 276 305 78 16 chr10 25687268 25687396 -114629369 + MIR SINE MIR 6 141 -121 961 127 0 0 chr10 25688235 25688361 -114628404 + FLAM_C SINE Alu 1 126 -17 1093 180 9 73 chr10 25688545 25688778 -114627987 + AluJo SINE Alu 1 218 -94 3081 142 9 4 chr10 25688842 25689393 -114627372 - L1P LINE L1 -3004 3142 2589 11371 112 24 6 chr10 25689393 25689697 -114627068 + L1PA8A LINE L1 3199 3496 -2650 195 42 0 0 chr10 25689697 25689721 -114627044 + (CAA)n Simple_repeat Simple_repeat 1 24 0 11371 112 24 6 chr10 25689721 25691279 -114625486 + L1PA8A LINE L1 3496 5094 -1052 454 141 0 0 chr10 25691353 25691431 -114625334 - MSTB1 LTR MaLR 0 432 355 5956 74 16 0 chr10 25691490 25692474 -114624291 + L1PA8A LINE L1 5098 6095 -36 440 111 0 37 chr10 25692506 25692587 -114624178 - MSTB1 LTR MaLR 0 432 355 2371 38 72 0 chr10 25692759 25693049 -114623716 - AluY SINE Alu 0 311 1 1705 148 71 41 chr10 25693096 25693460 -114623305 + THE1C LTR MaLR 1 375 0 2115 143 0 9 chr10 25694120 25694468 -114622297 - AluSx SINE Alu 0 345 1 836 135 0 57 chr10 25695030 25695171 -114621594 + FLAM_C SINE Alu 1 133 -10 442 281 0 25 chr10 25695955 25696076 -114620689 + L2 LINE L2 3188 3305 -8 4102 132 6 60 chr10 25696554 25697283 -114619482 - LTR8 LTR ERV1 0 691 3 300 272 126 0 chr10 25699144 25699247 -114617518 - MLT1J2 LTR MaLR -61 389 274 410 226 198 11 chr10 25699280 25699457 -114617308 - MLT1J1 LTR MaLR -236 210 1 311 26 0 0 chr10 25700431 25700469 -114616296 + U2 snRNA snRNA 1 38 -150 7599 25 4 0 chr10 25700791 25701727 -114615038 - L1P LINE L1 -1245 4901 3962 1119 318 64 7 chr10 25701923 25702548 -114614217 + MER115 DNA AcHobo 1 692 -1 254 239 65 154 chr10 25702770 25703063 -114613702 - L2 LINE L2 -739 2575 2309 180 0 0 0 chr10 25703916 25703936 -114612829 + (TA)n Simple_repeat Simple_repeat 2 21 0 39 68 0 0 chr10 25704123 25704197 -114612568 + AT_rich Low_complexity Low_complexity 1 74 0 2175 118 0 10 chr10 25704256 25704560 -114612205 - AluSx SINE Alu -11 301 1 3391 129 63 3 chr10 25704642 25705240 -114611525 - LTR24C LTR ERV1 -1 634 1 2178 118 7 3 chr10 25705510 25705815 -114610950 - AluSg SINE Alu -3 307 2 1986 184 36 2 chr10 25706053 25706466 -114610299 - MER89 LTR ERV1 -131 428 2 394 281 48 0 chr10 25706469 25706615 -114610150 - L1ME3A LINE L1 -329 5841 5689 1780 178 40 0 chr10 25707349 25707670 -114609095 + MER7A DNA MER2_type 12 343 -3 7954 197 49 47 chr10 25707728 25708277 -114608488 - L1MA10 LINE L1 -43 6527 5981 2167 97 0 0 chr10 25708277 25708555 -114608210 - AluSq SINE Alu -33 280 3 7954 197 49 47 chr10 25708555 25710013 -114606752 - L1MA10 LINE L1 -589 5981 4527 1690 146 0 4 chr10 25710013 25710274 -114606491 - AluSx SINE Alu -17 295 36 7954 197 49 47 chr10 25710274 25710665 -114606100 - L1MA10 LINE L1 -2043 4527 4138 1489 126 31 0 chr10 25710665 25710888 -114605877 + MER30 DNA MER1_type 1 230 0 7954 197 49 47 chr10 25710888 25711614 -114605151 - L1MA10 LINE L1 -2432 4138 3393 1219 239 35 37 chr10 25711611 25712374 -114604391 - L1MA10 LINE L1 -3588 2794 2030 * 449 351 76 54 chr10 25712477 25713076 -114603689 + L2 LINE L2 2589 3198 -74 202 225 0 0 chr10 25713117 25713157 -114603608 + (CATA)n Simple_repeat Simple_repeat 3 42 0 196 287 181 11 chr10 25713160 25713254 -114603511 + MIR3 SINE MIR 47 156 -52 210 302 23 47 chr10 25714865 25714951 -114601814 - L2 LINE L2 0 3272 3189 1710 203 3 13 chr10 25715489 25715800 -114600965 + AluJo SINE Alu 1 308 -4 322 315 101 39 chr10 25715870 25716048 -114600717 - MIR3 SINE MIR -7 201 13 444 372 13 13 chr10 25716972 25717203 -114599562 + MIR SINE MIR 22 252 -10 327 311 0 0 chr10 25717481 25717571 -114599194 - L1MC4 LINE L1 -1339 6703 6614 686 119 53 35 chr10 25717596 25717866 -114598899 + (CATATA)n Simple_repeat Simple_repeat 1 274 0 307 318 0 0 chr10 25717869 25717957 -114598808 - L1MC4 LINE L1 -1341 6701 6614 * 361 197 46 0 chr10 25717941 25718050 -114598715 - L1MCa LINE L1 -1339 6983 1995 344 273 23 0 chr10 25717975 25718063 -114598702 + L1MC4 LINE L1 6614 6703 -1339 * 313 244 47 23 chr10 25718069 25718155 -114598610 - L1MC4 LINE L1 -1339 6703 6616 251 231 0 22 chr10 25718156 25718247 -114598518 - L1MC4 LINE L1 -1340 6702 6614 251 157 20 0 chr10 25718248 25718299 -114598466 + (TA)n Simple_repeat Simple_repeat 2 53 0 198 0 0 0 chr10 25718300 25718322 -114598443 + (TATG)n Simple_repeat Simple_repeat 3 24 0 1625 176 3 7 chr10 25718327 25718611 -114598154 - AluJb SINE Alu -29 283 1 844 207 17 81 chr10 25718823 25719181 -114597584 - L1MC5 LINE L1 -48 7913 7579 2323 87 0 34 chr10 25720056 25720378 -114596387 - AluY SINE Alu 0 311 1 3294 177 81 30 chr10 25722908 25723653 -114593112 - LTR39 LTR ERV1 0 783 1 416 252 52 26 chr10 25723776 25723891 -114592874 + MIR SINE MIR 37 154 -108 306 0 0 0 chr10 25723917 25723951 -114592814 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2121 127 3 0 chr10 25723956 25724239 -114592526 - AluSx SINE Alu -28 284 1 1450 182 4 16 chr10 25724443 25724696 -114592069 - AluJo SINE Alu -26 286 37 380 288 94 24 chr10 25724878 25725034 -114591731 - MIR SINE MIR -74 188 18 2107 130 140 8 chr10 25725034 25725412 -114591353 - MSTA LTR MaLR 0 428 1 380 288 94 24 chr10 25725412 25725425 -114591340 - MIR SINE MIR -244 18 7 2142 153 67 21 chr10 25726458 25726890 -114589875 - MLT1C LTR MaLR -15 452 1 6050 64 0 4 chr10 25728285 25729064 -114587701 + L1PA7 LINE L1 5376 6151 -3 524 272 131 15 chr10 25729192 25729398 -114587367 - MIR SINE MIR 0 262 33 469 234 32 24 chr10 25730489 25730613 -114586152 - MIR SINE MIR -24 238 114 795 285 98 30 chr10 25730811 25731239 -114585526 + LTR16A LTR ERVL 1 457 0 195 42 0 0 chr10 25731452 25731476 -114585289 + (CA)n Simple_repeat Simple_repeat 1 24 0 4656 105 10 31 chr10 25732487 25733261 -114583504 + L1PA13 LINE L1 5400 6157 -6 2033 96 68 7 chr10 25733308 25733601 -114583164 + AluSq SINE Alu 1 311 -2 651 336 111 38 chr10 25735247 25735771 -114580994 + L1MEd LINE L1 458 1019 -5511 333 242 91 28 chr10 25736115 25736367 -114580398 + L1MEd LINE L1 1345 1612 -4918 469 330 57 9 chr10 25736407 25736634 -114580131 + HAL1 LINE L1 1361 1598 -909 379 286 93 6 chr10 25737017 25737199 -114579566 + L1MEd LINE L1 2384 2581 -3959 243 223 69 34 chr10 25737202 25737377 -114579388 + L1M4 LINE L1 4249 4429 -1717 2178 135 8 3 chr10 25737416 25737771 -114578994 + MER47A DNA MER2_type 1 357 -9 275 237 11 0 chr10 25737772 25737865 -114578900 + (TCTA)n Simple_repeat Simple_repeat 4 97 0 * 282 149 18 54 chr10 25737852 25738020 -114578745 + (TA)n Simple_repeat Simple_repeat 1 162 0 225 97 65 32 chr10 25738032 25738094 -114578671 + (CTATA)n Simple_repeat Simple_repeat 2 65 0 2767 180 160 31 chr10 25738593 25739442 -114577323 - L1MB7 LINE L1 -2 6182 5227 604 277 88 36 chr10 25739559 25739978 -114576787 - L1ME4a LINE L1 -202 5919 5479 247 287 35 27 chr10 25740420 25740569 -114576196 + MIR SINE MIR 18 259 -3 193 286 0 71 chr10 25741284 25741368 -114575397 - MIR3 SINE MIR -6 202 125 26 0 0 27 chr10 25741440 25741457 -114575308 + AT_rich Low_complexity Low_complexity 1 17 -19 2536 65 0 0 chr10 25741457 25741764 -114575001 + AluY SINE Alu 1 307 -4 26 0 0 27 chr10 25741764 25741783 -114574982 + AT_rich Low_complexity Low_complexity 17 36 0 1638 112 4 4 chr10 25742365 25742619 -114574146 - AluSg/x SINE Alu 0 310 67 532 107 13 0 chr10 25742619 25742694 -114574071 + AluS SINE Alu 5 80 -232 331 315 9 18 chr10 25743513 25743624 -114573141 - MIR3 SINE MIR -2 206 97 911 194 0 13 chr10 25743902 25744057 -114572708 + AluJo SINE Alu 1 153 -159 375 278 0 0 chr10 25744073 25744163 -114572602 - L1MC4 LINE L1 -1339 6703 6614 347 300 0 0 chr10 25744089 25744179 -114572586 + L1MC4 LINE L1 6614 6703 -1339 * 225 178 0 0 chr10 25744185 25744230 -114572535 + (CA)n Simple_repeat Simple_repeat 2 46 0 484 85 71 7 chr10 25744326 25744467 -114572298 + (TA)n Simple_repeat Simple_repeat 1 150 0 865 301 48 0 chr10 25745213 25745502 -114571263 + MLT1J LTR MaLR 1 303 -208 280 333 131 18 chr10 25745894 25746062 -114570703 + MIR3 SINE MIR 20 206 -2 375 23 0 0 chr10 25747188 25747232 -114569533 + (TG)n Simple_repeat Simple_repeat 1 44 0 2153 188 25 58 chr10 25749212 25749743 -114567022 - MLT1E2 LTR MaLR -111 515 3 220 333 0 32 chr10 25749971 25750064 -114566701 + GA-rich Low_complexity Low_complexity 4 93 0 1753 172 0 13 chr10 25750086 25750394 -114566371 + AluJb SINE Alu 3 306 -6 2426 87 6 0 chr10 25750442 25750753 -114566012 + AluSq SINE Alu 1 313 0 269 50 0 25 chr10 25750753 25750793 -114565972 + (TA)n Simple_repeat Simple_repeat 1 39 0 399 310 16 0 chr10 25750903 25751032 -114565733 - MER94 DNA DNA -2 132 2 453 313 58 50 chr10 25751846 25752105 -114564660 + MIR SINE MIR 1 261 -1 488 128 21 64 chr10 25752492 25752586 -114564179 + AluJo SINE Alu 128 217 -95 240 297 74 74 chr10 25753006 25753154 -114563611 - L2 LINE L2 0 3272 3125 697 213 40 23 chr10 25753212 25753386 -114563379 + MER5B DNA MER1_type 2 178 0 354 250 0 0 chr10 25753613 25753681 -114563084 - L2 LINE L2 -11 3302 3235 331 330 80 17 chr10 25753710 25753886 -114562879 + MER5A DNA MER1_type 3 189 0 185 281 46 78 chr10 25753952 25754105 -114562660 - L2 LINE L2 -219 3053 2906 205 191 0 21 chr10 25756683 25756730 -114560035 + GA-rich Low_complexity Low_complexity 1 46 0 510 114 0 0 chr10 25756761 25756840 -114559925 + (TAGG)n Simple_repeat Simple_repeat 1 79 0 270 95 0 0 chr10 25756916 25756958 -114559807 + (CA)n Simple_repeat Simple_repeat 2 43 0 885 186 166 77 chr10 25757209 25757616 -114559149 + L1 LINE L1 4950 5391 -775 337 225 0 25 chr10 25757873 25757953 -114558812 - HAL1b LINE L1 -437 911 834 3369 213 70 22 chr10 25758011 25758824 -114557941 - MER21B LTR ERV1 -11 852 1 2076 110 120 3 chr10 25758840 25759166 -114557599 - THE1B LTR MaLR 0 364 1 532 254 15 0 chr10 25759226 25759356 -114557409 + MIR SINE MIR 131 262 0 1044 106 14 0 chr10 25759450 25759591 -114557174 + AluSg/x SINE Alu 156 298 -14 306 305 99 46 chr10 25759810 25759961 -114556804 - L1MEd LINE L1 -4905 1214 1056 635 262 57 9 chr10 25760479 25760689 -114556076 - L2 LINE L2 0 3313 3094 1043 241 147 105 chr10 25760767 25761461 -114555304 - L2 LINE L2 -728 2586 1864 719 82 49 8 chr10 25762008 25762130 -114554635 + MLT1B LTR MaLR 1 127 -263 1034 143 11 0 chr10 25762427 25762609 -114554156 + MLT1B LTR MaLR 131 314 -76 1174 185 0 151 chr10 25762620 25762737 -114554028 - L1PB4 LINE L1 0 6156 6023 1749 137 29 22 chr10 25762737 25763014 -114553751 + AluJb SINE Alu 1 279 -33 1174 185 0 151 chr10 25763014 25763280 -114553485 - L1PB4 LINE L1 -133 6023 5831 475 157 34 12 chr10 25763282 25763387 -114553378 + MLT1B LTR MaLR 300 388 -2 1752 192 0 23 chr10 25763633 25763935 -114552830 - AluJb SINE Alu -17 295 1 373 312 148 8 chr10 25764185 25764422 -114552343 - L1ME LINE L1 -333 5788 5519 2066 141 10 0 chr10 25764550 25764855 -114551910 - AluSx SINE Alu -4 308 1 2283 114 3 0 chr10 25766252 25766549 -114550216 - AluSq SINE Alu -15 298 1 744 344 20 4 chr10 25766991 25767244 -114549521 + MIR SINE MIR 6 262 0 447 273 43 22 chr10 25767322 25767461 -114549304 - L2 LINE L2 -297 3016 2875 2050 132 0 0 chr10 25767922 25768261 -114548504 - AluSx SINE Alu 0 340 2 1164 288 58 27 chr10 25769783 25770476 -114546289 - HAL1 LINE L1 -1734 773 10 557 325 150 15 chr10 25770479 25770834 -114545931 + L2 LINE L2 1813 2119 -1195 19888 94 23 3 chr10 25770834 25774549 -114542216 - L1PA7 LINE L1 0 6154 2377 557 325 150 15 chr10 25774549 25774848 -114541917 + L2 LINE L2 2119 2555 -759 400 292 92 0 chr10 25775047 25775167 -114541598 + L2 LINE L2 3142 3272 0 738 94 0 0 chr10 25775674 25775780 -114540985 + L1PA5 LINE L1 6048 6153 -1 275 330 93 25 chr10 25776581 25776699 -114540066 + L2 LINE L2 3141 3266 -6 1827 124 148 9 chr10 25776769 25777108 -114539657 - MSTA LTR MaLR 0 428 43 41645 41 2 1 chr10 25777108 25783249 -114533516 - L1PA3 LINE L1 -1 6154 10 313 185 0 0 chr10 25783258 25783312 -114533453 - MSTA LTR MaLR -374 54 1 331 280 120 63 chr10 25783619 25783794 -114532971 - MER5A DNA MER1_type -4 185 1 209 191 0 0 chr10 25783897 25783939 -114532826 + (TATG)n Simple_repeat Simple_repeat 2 43 0 197 294 0 0 chr10 25784274 25784325 -114532440 + MIR SINE MIR 103 153 -55 260 208 0 14 chr10 25784516 25784588 -114532177 + (TA)n Simple_repeat Simple_repeat 2 72 0 264 154 0 0 chr10 25785209 25785261 -114531504 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 238 286 0 0 chr10 25785336 25785392 -114531373 + MIR3 SINE MIR 151 206 -2 1944 184 3 0 chr10 25786924 25787307 -114529458 - AluJb SINE Alu 0 384 1 2793 213 38 7 chr10 25787477 25788084 -114528681 + MLT1E2 LTR MaLR 1 626 0 464 317 30 18 chr10 25788758 25788925 -114527840 - L2 LINE L2 -436 2878 2710 436 268 23 5 chr10 25789166 25789303 -114527462 + MIR SINE MIR 56 192 -58 898 202 93 75 chr10 25789408 25789794 -114526971 + MSTD LTR MaLR 1 393 -3 531 293 130 19 chr10 25790086 25790167 -114526598 - MIR SINE MIR -24 238 167 288 0 0 0 chr10 25790167 25790199 -114526566 + (TTA)n Simple_repeat Simple_repeat 2 33 0 531 293 130 19 chr10 25790199 25790325 -114526440 - MIR SINE MIR -95 167 8 21 0 0 0 chr10 25790509 25790530 -114526235 + AT_rich Low_complexity Low_complexity 1 21 0 285 51 0 0 chr10 25790608 25790647 -114526118 + (CA)n Simple_repeat Simple_repeat 2 40 0 2199 161 19 38 chr10 25790780 25791202 -114525563 - MLT2D LTR ERVL 0 414 1 265 310 34 56 chr10 25791284 25791552 -114525213 - L1MC/D LINE L1 -2264 5544 5283 7675 24 4 2 chr10 25792943 25794184 -114522581 - L1PA3 LINE L1 0 6155 4915 379 42 0 0 chr10 25794185 25794233 -114522532 + 5S rRNA rRNA 1 48 -73 270 0 0 0 chr10 25795219 25795249 -114521516 + (T)n Simple_repeat Simple_repeat 1 30 0 300 329 19 52 chr10 25795457 25795612 -114521153 + MIR3 SINE MIR 20 169 -39 705 282 75 9 chr10 25796669 25796882 -114519883 - MIR SINE MIR -15 247 21 314 291 28 85 chr10 25796947 25797088 -114519677 - MIR SINE MIR -83 179 47 228 111 0 0 chr10 25797088 25797124 -114519641 + (T)n Simple_repeat Simple_repeat 1 36 0 4963 165 28 7 chr10 25798698 25799627 -114517138 - L1MC1 LINE L1 0 6333 5385 1371 151 12 4 chr10 25800058 25800303 -114516462 - MLT2D LTR ERVL -167 247 1 265 310 34 56 chr10 25800385 25800653 -114516112 - L1MC/D LINE L1 -2264 5544 5283 18292 34 0 0 chr10 25802045 25805033 -114511732 - L1PA3 LINE L1 0 6155 3166 341 300 0 36 chr10 25805957 25806067 -114510698 - MIR3 SINE MIR -3 205 100 851 183 7 108 chr10 25807737 25808016 -114508749 + MLT1A1 LTR MaLR 115 365 0 183 281 56 11 chr10 25808329 25808418 -114508347 + MIR SINE MIR 47 139 -123 252 143 0 0 chr10 25808780 25808822 -114507943 + (A)n Simple_repeat Simple_repeat 1 42 0 370 298 78 27 chr10 25808889 25809080 -114507685 + MIR SINE MIR 9 213 -49 892 246 106 47 chr10 25809080 25809466 -114507299 + MLT1I LTR MaLR 1 409 0 370 298 78 27 chr10 25809466 25809516 -114507249 + MIR SINE MIR 213 259 -3 1751 230 37 7 chr10 25810100 25810561 -114506204 + MER39 LTR ERV1 233 707 0 1256 108 0 0 chr10 25811512 25811698 -114505067 - L1PA12 LINE L1 -191 5977 5792 820 239 86 17 chr10 25812652 25813490 -114503275 - L1ME3A LINE L1 -70 6100 5216 267 264 34 34 chr10 25813712 25813860 -114502905 - L1ME3A LINE L1 -1812 4334 4187 * 504 266 54 20 chr10 25813849 25814052 -114502713 - L1ME3A LINE L1 -2462 3684 3475 681 348 13 16 chr10 25815061 25815324 -114501441 - MIR SINE MIR 0 262 3 187 286 143 48 chr10 25815401 25815527 -114501238 + L2 LINE L2 3100 3237 -35 1017 274 134 25 chr10 25815707 25816177 -114500588 - LTR33 LTR ERVL 0 521 1 204 229 0 0 chr10 25816265 25816313 -114500452 - L2 LINE L2 -1 3312 3265 345 360 22 29 chr10 25818463 25818602 -114498163 - MIR3 SINE MIR -17 191 54 283 274 104 2 chr10 25819593 25819744 -114497021 - MER20B DNA MER1_type -586 197 1 2072 139 3 10 chr10 25819798 25820107 -114496658 + AluSx SINE Alu 1 307 -5 321 253 0 0 chr10 25820107 25820195 -114496570 + GA-rich Low_complexity Low_complexity 6 96 0 275 272 12 0 chr10 25820211 25820292 -114496473 - MER112 DNA MER1_type -84 176 95 1862 193 55 84 chr10 25820658 25821536 -114495229 + L1MB2 LINE L1 5376 6184 0 214 189 19 0 chr10 25821747 25821776 -114494989 + (TA)n Simple_repeat Simple_repeat 1 33 -21 207 0 0 0 chr10 25821776 25821799 -114494966 + (TG)n Simple_repeat Simple_repeat 2 24 0 214 189 19 0 chr10 25821799 25821822 -114494943 + (TA)n Simple_repeat Simple_repeat 33 54 0 24 0 0 0 chr10 25822161 25822185 -114494580 + AT_rich Low_complexity Low_complexity 1 24 0 1258 48 0 0 chr10 25823952 25824097 -114492668 - L1PA3 LINE L1 -3 6152 6008 254 231 16 83 chr10 25824617 25824738 -114492027 - 7SK RNA RNA -69 124 12 2419 93 0 0 chr10 25824823 25825125 -114491640 - AluSx SINE Alu -10 302 1 2072 120 0 74 chr10 25825347 25825673 -114491092 - AluSx SINE Alu -10 302 1 2027 163 34 29 chr10 25827307 25827349 -114489416 - L1M4 LINE L1 -539 5645 5605 2179 117 3 3 chr10 25827349 25827656 -114489109 - AluSq SINE Alu -6 307 1 2027 163 34 29 chr10 25827656 25828119 -114488646 - L1M4 LINE L1 -579 5605 5135 2060 132 83 37 chr10 25828119 25828467 -114488298 - THE1B LTR MaLR 0 364 1 2027 163 34 29 chr10 25828467 25828609 -114488156 - L1M4 LINE L1 -1049 5135 4995 * 2092 174 10 22 chr10 25828607 25829010 -114487755 + L1MA7 LINE L1 5791 6188 -103 831 149 0 0 chr10 25829012 25829146 -114487619 + MER4B LTR ERV1 1 134 -476 1723 171 47 11 chr10 25829148 25829510 -114487255 - MER50 LTR ERV1 -23 711 337 1440 152 8 29 chr10 25831829 25832073 -114484692 + AluJo SINE Alu 25 263 -49 180 352 62 31 chr10 25832960 25833122 -114483643 - MIR3 SINE MIR -26 182 16 2403 152 10 2 chr10 25833540 25833935 -114482830 - L1PA16 LINE L1 0 6166 5769 4674 66 0 2 chr10 25833935 25834495 -114482270 - L1PA6 LINE L1 0 6154 5593 2466 165 28 28 chr10 25834804 25835229 -114481536 + MSTB LTR MaLR 1 425 -1 400 256 188 23 chr10 25835304 25835437 -114481328 - MER5B DNA MER1_type -1 177 23 269 209 75 0 chr10 25835580 25835647 -114481118 - MIR SINE MIR -135 127 56 270 186 0 0 chr10 25836485 25836528 -114480237 + tRNA-Leu-CTT tRNA tRNA 1 43 -42 1836 127 28 3 chr10 25836534 25836817 -114479948 + AluSc SINE Alu 1 290 -19 7098 71 2 14 chr10 25836839 25837186 -114479579 + L1PA7 LINE L1 5026 5376 -778 2230 119 0 31 chr10 25837186 25837505 -114479260 + AluSc SINE Alu 1 309 0 7098 71 2 14 chr10 25837505 25838255 -114478510 + L1PA7 LINE L1 5376 6138 -16 261 0 0 0 chr10 25838460 25838489 -114478276 + (CTTG)n Simple_repeat Simple_repeat 4 32 0 1506 167 8 12 chr10 25838489 25838739 -114478026 - AluJb SINE Alu -55 257 7 316 264 28 0 chr10 25838739 25838811 -114477954 + MIR3 SINE MIR 85 158 -50 311 340 116 73 chr10 25838806 25839176 -114477589 + L2 LINE L2 2881 3266 -6 * 644 240 27 38 chr10 25839187 25839370 -114477395 - L2 LINE L2 0 3313 3133 467 341 44 36 chr10 25839975 25840227 -114476538 + MIR SINE MIR 8 261 -1 186 43 0 0 chr10 25842035 25842058 -114474707 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 226 434 7 0 chr10 25842731 25842867 -114473898 - L2 LINE L2 -189 3083 2947 1820 158 4 4 chr10 25842989 25843268 -114473497 - AluJo SINE Alu -23 289 11 241 185 31 0 chr10 25843719 25843784 -114472981 + GA-rich Low_complexity Low_complexity 3 69 0 1009 197 8 38 chr10 25844112 25844351 -114472414 + L1MD3 LINE L1 7763 7994 -1 2012 145 7 0 chr10 25845355 25845652 -114471113 + AluSc SINE Alu 1 299 -10 185 132 26 0 chr10 25845676 25845714 -114471051 + CT-rich Low_complexity Low_complexity 3 41 0 509 246 0 74 chr10 25846469 25846644 -114470121 - L2 LINE L2 -2 3311 3150 * 580 225 130 12 chr10 25846635 25846804 -114469961 - MIR SINE MIR -57 205 17 349 312 132 11 chr10 25846847 25847108 -114469657 - L2 LINE L2 -236 3077 2782 23 0 0 0 chr10 25847117 25847140 -114469625 + AT_rich Low_complexity Low_complexity 1 23 0 4177 125 36 5 chr10 25847296 25847929 -114468836 - L1PA16 LINE L1 0 6166 5514 1872 157 0 9 chr10 25847929 25848253 -114468512 - L1P4 LINE L1 -573 5593 5273 465 320 69 10 chr10 25849927 25850130 -114466635 + MIR SINE MIR 48 262 0 21 36 0 0 chr10 25850499 25850527 -114466238 + AT_rich Low_complexity Low_complexity 1 28 0 441 0 0 0 chr10 25851450 25851499 -114465266 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 1735 276 18 12 chr10 25852725 25853235 -114463530 - L1MEc LINE L1 -5847 549 37 1854 146 24 0 chr10 25853762 25854050 -114462715 + AluSq SINE Alu 1 295 -18 1735 207 32 45 chr10 25854113 25854553 -114462212 - MLT1C LTR MaLR 0 467 34 427 227 25 8 chr10 25854600 25854719 -114462046 + LTR33 LTR ERVL 1 121 -400 293 250 25 145 chr10 25905892 25905939 -114410826 - MER5B DNA MER1_type 0 189 138 2131 122 27 0 chr10 25905939 25906235 -114410530 - AluSx SINE Alu -8 304 1 293 250 25 145 chr10 25906235 25906387 -114410378 - MER5B DNA MER1_type -51 138 3 2168 202 7 0 chr10 25906483 25906898 -114409867 + MER47B DNA MER2_type 1 418 0 231 223 8 15 chr10 25906898 25907022 -114409743 + (TA)n Simple_repeat Simple_repeat 2 124 0 301 133 0 50 chr10 25907024 25907084 -114409681 + MLT2B1 LTR ERVL 464 520 0 267 291 176 20 chr10 25908032 25908231 -114408534 - MIR SINE MIR -13 249 20 198 148 16 33 chr10 25908708 25908769 -114407996 + (CA)n Simple_repeat Simple_repeat 1 60 0 1466 251 51 37 chr10 25912160 25912832 -114403933 - HAL1 LINE L1 -770 1737 1057 258 32 0 0 chr10 25913275 25913306 -114403459 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 237 65 0 0 chr10 25913412 25913443 -114403322 + (ATG)n Simple_repeat Simple_repeat 2 32 0 757 305 12 31 chr10 25913445 25913588 -114403177 - MIR SINE MIR -8 254 117 1686 138 202 17 chr10 25913588 25913949 -114402816 - MSTA LTR MaLR 0 428 1 757 305 12 31 chr10 25913949 25914061 -114402704 - MIR SINE MIR -145 117 4 198 143 0 0 chr10 25914396 25914431 -114402334 + (CA)n Simple_repeat Simple_repeat 2 36 0 253 267 62 62 chr10 25914523 25914669 -114402096 + MIR SINE MIR 66 211 -51 2089 135 3 0 chr10 25915638 25915934 -114400831 + AluSx SINE Alu 1 297 -15 2494 76 0 0 chr10 25915940 25916244 -114400521 + AluSg SINE Alu 1 304 -6 926 94 0 0 chr10 25916598 25916726 -114400039 - L1PA7 LINE L1 -1 6153 6026 5110 58 6 0 chr10 25916733 25917917 -114398848 - L1PA7 LINE L1 -236 5918 4730 5948 96 9 0 chr10 25918117 25919221 -114397544 - L1PB2 LINE L1 0 6151 5074 259 333 65 32 chr10 25920805 25920819 -114395946 - L2 LINE L2 -7 3265 3253 207 0 0 0 chr10 25920819 25920842 -114395923 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 259 333 65 32 chr10 25920842 25920950 -114395815 - L2 LINE L2 -19 3253 3139 679 261 37 29 chr10 25921367 25921612 -114395153 - L2 LINE L2 -924 2390 2144 2212 157 30 3 chr10 25921810 25922148 -114394617 - MER7A DNA MER2_type 0 346 2 1742 199 0 0 chr10 25922175 25922477 -114394288 + AluJb SINE Alu 2 303 -9 22 0 0 0 chr10 25923138 25923160 -114393605 + AT_rich Low_complexity Low_complexity 1 22 0 812 188 0 0 chr10 25923391 25923540 -114393225 + FRAM SINE Alu 23 171 -5 560 293 78 27 chr10 25923772 25924185 -114392580 + L1MEd LINE L1 595 1028 -5091 1475 158 165 11 chr10 25924192 25924452 -114392313 + AluJo SINE Alu 1 300 -2 1953 167 21 0 chr10 25924459 25924788 -114391977 - L1MB1 LINE L1 -4 6400 6065 11248 193 43 19 chr10 25924788 25926759 -114390006 - L1MB1 LINE L1 -721 5683 3627 2052 85 48 0 chr10 25926759 25927052 -114389713 - AluYa5 SINE Alu 0 306 1 11248 193 43 19 chr10 25927052 25927676 -114389089 - L1MB1 LINE L1 -2777 3627 3020 1128 219 29 33 chr10 25927700 25927942 -114388823 + AluJo SINE Alu 1 241 -71 608 238 63 16 chr10 25928021 25928210 -114388555 - L1MB1 LINE L1 -3386 2996 2799 * 1909 269 35 15 chr10 25928200 25929327 -114387438 - L1MB1 LINE L1 -4024 2358 1257 * 44886 42 1 1 chr10 25929325 25935479 -114381286 - L1PA4 LINE L1 0 6155 1 2282 284 58 40 chr10 25935479 25936990 -114379775 - L1M3d LINE L1 -4819 1072 1 1660 162 0 18 chr10 25937010 25937288 -114379477 - AluJo SINE Alu 0 312 40 470 285 10 31 chr10 25937290 25937483 -114379282 + L1MEd LINE L1 1025 1213 -4906 29 70 0 0 chr10 25939053 25939110 -114377655 + AT_rich Low_complexity Low_complexity 1 57 0 1660 194 0 10 chr10 25939223 25939512 -114377253 - AluJo SINE Alu -22 290 5 188 319 50 34 chr10 25939892 25940011 -114376754 - L2 LINE L2 -557 2757 2637 1367 167 4 4 chr10 25940049 25940276 -114376489 + AluJb SINE Alu 86 312 0 389 271 95 50 chr10 25940432 25940694 -114376071 - L2 LINE L2 -822 2492 2219 222 304 108 21 chr10 25940854 25941048 -114375717 + L3 LINE CR1 1233 1443 -134 2022 120 3 30 chr10 25941249 25941577 -114375188 + AluSx SINE Alu 1 312 0 1692 199 16 0 chr10 25941848 25942185 -114374580 - AluJb SINE Alu 0 342 1 414 0 0 0 chr10 25942306 25942352 -114374413 + (CA)n Simple_repeat Simple_repeat 2 47 0 281 130 65 0 chr10 25942529 25942575 -114374190 - AluJ/FRAM SINE Alu -26 276 228 2333 105 0 0 chr10 25942786 25943090 -114373675 - AluSx SINE Alu -8 304 1 284 289 62 39 chr10 25943771 25943899 -114372866 - MIR3 SINE MIR -68 140 10 2107 150 0 10 chr10 25944049 25944363 -114372402 - AluSx SINE Alu -1 311 1 6336 114 20 5 chr10 25944365 25945331 -114371434 - L1PA11 LINE L1 -8 6166 5198 242 318 204 0 chr10 25945731 25945863 -114370902 + MIR3 SINE MIR 47 205 -3 1520 121 70 0 chr10 25948800 25949015 -114367750 + MER30 DNA MER1_type 1 230 0 6230 89 11 8 chr10 25949421 25950290 -114366475 - L1PA10 LINE L1 0 6168 5297 181 379 0 0 chr10 25950543 25950609 -114366156 + MIR SINE MIR 52 117 -145 24 32 0 0 chr10 25950894 25950925 -114365840 + AT_rich Low_complexity Low_complexity 1 31 0 314 358 94 20 chr10 25950933 25951187 -114365578 - L2 LINE L2 -800 2514 2242 905 273 38 73 chr10 25951203 25951599 -114365166 + L2 LINE L2 2932 3313 0 233 172 86 0 chr10 25951598 25951656 -114365109 - MIR SINE MIR -19 243 181 * 504 308 40 12 chr10 25951672 25951919 -114364846 - L2 LINE L2 -1093 2221 1968 2569 33 3 3 chr10 25952097 25952399 -114364366 - AluY SINE Alu -9 302 1 1880 170 0 0 chr10 25952882 25953170 -114363595 + AluJb SINE Alu 6 293 -19 381 117 0 0 chr10 25955438 25955498 -114361267 + (TA)n Simple_repeat Simple_repeat 2 61 0 7961 35 0 0 chr10 25955498 25956919 -114359846 - L1PA5 LINE L1 -12 6142 4718 2419 72 3 0 chr10 25956919 25957225 -114359540 + L1PA5 LINE L1 4430 4736 -1410 1795 166 0 40 chr10 25957342 25957667 -114359098 - AluJo SINE Alu 0 312 1 248 325 98 44 chr10 25959167 25959555 -114357210 + L2 LINE L2 1496 1904 -1410 264 268 107 13 chr10 25959555 25960080 -114356685 + L1MD3 LINE L1 5589 6092 -74 445 31 16 16 chr10 25960080 25960144 -114356621 + (TG)n Simple_repeat Simple_repeat 1 64 0 264 268 107 13 chr10 25960144 25960194 -114356571 + L1MD3 LINE L1 6092 6136 -30 1659 179 14 21 chr10 25960194 25960351 -114356414 - AluJb SINE Alu -23 289 132 207 0 0 0 chr10 25960351 25960374 -114356391 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2095 118 0 3 chr10 25960374 25960661 -114356104 - AluSq SINE Alu -27 286 1 1659 179 14 21 chr10 25960661 25960792 -114355973 - AluJb SINE Alu -178 134 2 6265 21 0 0 chr10 25960842 25961514 -114355251 - L1PA3 LINE L1 -3 6152 5481 8457 54 0 8 chr10 25961514 25962573 -114354192 - L1P LINE L1 -5090 1056 7 1110 326 106 41 chr10 25962636 25963016 -114353749 + L2 LINE L2 1965 2319 -953 1616 188 10 17 chr10 25963016 25963308 -114353457 + AluJo SINE Alu 3 292 -20 1110 326 106 41 chr10 25963308 25964149 -114352616 + L2 LINE L2 2319 3263 -9 1491 200 46 14 chr10 25964460 25964745 -114352020 + AluJo SINE Alu 1 294 -18 324 0 0 0 chr10 25965915 25965951 -114350814 + (TG)n Simple_repeat Simple_repeat 2 37 0 1019 152 24 30 chr10 25965995 25966160 -114350605 + AluJo SINE Alu 105 268 -44 210 37 0 0 chr10 25966336 25966363 -114350402 + (TTTTTA)n Simple_repeat Simple_repeat 2 28 0 3127 68 5 0 chr10 25966378 25966760 -114350005 - L1PA6 LINE L1 -1 6153 5770 230 0 33 0 chr10 25966760 25966790 -114349975 + (TA)n Simple_repeat Simple_repeat 2 32 0 2403 22 0 7 chr10 25966789 25967052 -114349713 - L1PA5 LINE L1 -3 6151 5884 248 0 0 30 chr10 25968238 25968271 -114348494 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 296 256 13 0 chr10 25968849 25968927 -114347838 + MER116 DNA Mariner 1 79 -1 856 209 41 0 chr10 25969076 25969248 -114347517 + L1MB7 LINE L1 5987 6165 -19 3859 211 24 15 chr10 25969251 25969986 -114346779 + L1MC/D LINE L1 4157 4920 -1344 2552 118 3 0 chr10 25969986 25970349 -114346416 + THE1B LTR MaLR 1 364 0 3859 211 24 15 chr10 25970349 25970955 -114345810 + L1MC/D LINE L1 4920 5519 -745 551 221 59 45 chr10 25970939 25971161 -114345604 + L1MC1 LINE L1 4664 4888 -1258 * 525 68 14 0 chr10 25971161 25971234 -114345531 + THE1C LTR MaLR 1 74 -301 4290 154 29 18 chr10 25971237 25972034 -114344731 + L1MC1 LINE L1 5528 6333 0 315 0 0 0 chr10 25972248 25972283 -114344482 + (ATG)n Simple_repeat Simple_repeat 3 37 0 456 233 39 39 chr10 25972873 25973002 -114343763 - L2 LINE L2 0 3313 3185 994 220 86 78 chr10 25973340 25973827 -114342938 + MLT1J LTR MaLR 2 492 -19 210 37 0 0 chr10 25974040 25974067 -114342698 + (TTGG)n Simple_repeat Simple_repeat 2 28 0 5529 102 7 0 chr10 25974070 25974882 -114341883 - L1PA15 LINE L1 -1 6164 5347 1980 128 4 0 chr10 25976017 25976321 -114340444 - AluSx SINE Alu 0 305 1 901 188 12 0 chr10 25977057 25977222 -114339543 - AluJb SINE Alu -13 299 133 1548 154 6 111 chr10 25978956 25979288 -114337477 - AluJb SINE Alu -1 301 5 1263 176 157 49 chr10 25979615 25979766 -114336999 + MLT1C LTR MaLR 1 134 -408 2217 71 0 7 chr10 25979766 25980077 -114336688 - AluY SINE Alu 0 309 1 1263 176 157 49 chr10 25980077 25980339 -114336426 + MLT1C LTR MaLR 134 535 -7 833 187 35 6 chr10 25981031 25981202 -114335563 - MER45A DNA AcHobo 0 178 3 736 86 9 0 chr10 25981432 25981537 -114335228 + L1PA4 LINE L1 6042 6147 -8 244 308 106 0 chr10 25981715 25981819 -114334946 - L2 LINE L2 -25 3247 3133 524 313 123 21 chr10 25981839 25982439 -114334326 + L2 LINE L2 2636 3303 -10 306 271 21 21 chr10 25982949 25983045 -114333720 + MER81 DNA DNA 1 96 -18 670 206 0 0 chr10 25983527 25983653 -114333112 - MER58B DNA MER1_type -1 340 215 418 152 0 0 chr10 25983653 25983719 -114333046 + MER58B DNA MER1_type 264 329 -12 503 165 0 0 chr10 25983730 25983809 -114332956 - MER58A DNA MER1_type -28 79 1 285 171 21 15 chr10 25984343 25984425 -114332340 - AluSg SINE Alu -195 105 42 1820 145 34 24 chr10 25984468 25984764 -114332001 + AluJb SINE Alu 1 299 -13 857 143 30 6 chr10 25985107 25985275 -114331490 + L1PA15 LINE L1 5994 6165 0 2923 115 31 4 chr10 25989112 25989565 -114327200 - L1PA16 LINE L1 -3 6163 5699 345 393 66 6 chr10 25989702 25989885 -114326880 - MIR3 SINE MIR -1 207 14 21 36 0 0 chr10 25989913 25989941 -114326824 + AT_rich Low_complexity Low_complexity 1 28 0 210 122 61 20 chr10 25989992 25990041 -114326724 + (TATAA)n Simple_repeat Simple_repeat 2 52 0 291 28 0 0 chr10 25990238 25990274 -114326491 + (TG)n Simple_repeat Simple_repeat 1 36 0 302 295 62 15 chr10 25990329 25990625 -114326140 - L1ME3A LINE L1 -226 6180 5868 496 324 61 39 chr10 25990789 25991119 -114325646 - L1ME3A LINE L1 -904 5478 5142 696 286 78 20 chr10 25991167 25991760 -114325005 - L1ME3A LINE L1 -1890 4492 3839 2209 116 7 0 chr10 25991820 25992112 -114324653 + AluSg SINE Alu 1 294 -16 378 0 0 0 chr10 25992151 25992193 -114324572 + (TG)n Simple_repeat Simple_repeat 1 42 0 324 313 86 25 chr10 25992196 25992394 -114324371 - L1ME3A LINE L1 -2643 3739 3530 397 304 36 36 chr10 25992632 25992879 -114323886 - L1ME3A LINE L1 -4749 1635 1389 484 302 105 30 chr10 25992879 25993537 -114323228 - L1ME3A LINE L1 -4894 1478 772 287 289 66 79 chr10 25993672 25993900 -114322865 - L1ME3A LINE L1 -5864 508 284 586 143 0 0 chr10 25997010 25997094 -114319671 - FRAM SINE Alu -26 150 67 1059 273 78 18 chr10 25998749 25999144 -114317621 - MLT1J2 LTR MaLR -31 419 1 2058 151 3 0 chr10 26000119 26000417 -114316348 + AluSx SINE Alu 1 299 -13 1899 166 0 10 chr10 26001409 26001705 -114315060 - AluJo SINE Alu -19 293 1 314 282 0 0 chr10 26001904 26001975 -114314790 + MIR SINE MIR 84 154 -108 369 285 127 36 chr10 26003673 26003926 -114312839 + MARNA DNA Mariner 269 544 -42 27 29 0 0 chr10 26004790 26004824 -114311941 + AT_rich Low_complexity Low_complexity 1 34 0 1595 191 27 3 chr10 26004976 26005275 -114311490 - AluJo SINE Alu -6 306 1 341 381 62 14 chr10 26005322 26005611 -114311154 - L1ME4a LINE L1 -236 5885 5583 398 308 65 32 chr10 26006136 26006369 -114310396 - L1ME4a LINE L1 -1219 4927 4681 507 339 18 41 chr10 26006383 26006570 -114310195 + MIR SINE MIR 15 198 -64 2673 179 89 54 chr10 26006570 26006906 -114309859 - MER44D DNA MER2_type -1882 605 357 2036 117 10 3 chr10 26006906 26007206 -114309559 + AluY SINE Alu 1 302 -9 2673 179 89 54 chr10 26007206 26007577 -114309188 - MER44D DNA MER2_type -2130 357 1 507 339 18 41 chr10 26007577 26007610 -114309155 + MIR SINE MIR 198 230 -32 317 291 211 36 chr10 26007777 26008024 -114308741 + L1MDa LINE L1 40 329 -6211 245 225 0 108 chr10 26008506 26008617 -114308148 + L1MDa LINE L1 909 1007 -5536 492 77 0 0 chr10 26008631 26008696 -114308069 + MLT1A2 LTR MaLR 258 322 -52 476 126 6 6 chr10 26008738 26008832 -114307933 + MLT1A1 LTR MaLR 296 365 0 1349 129 26 33 chr10 26008832 26009104 -114307661 - Charlie5 DNA MER1_type -110 2502 2233 765 133 0 16 chr10 26009314 26009442 -114307323 + L1PB4 LINE L1 6031 6156 0 2241 96 14 7 chr10 26010095 26010388 -114306377 - AluSx SINE Alu -17 295 1 1897 161 45 34 chr10 26012334 26012879 -114303886 - MLT2A2 LTR ERVL -1 553 2 1315 167 14 0 chr10 26013313 26013535 -114303230 + AluJb SINE Alu 85 309 -3 225 0 0 0 chr10 26013832 26013857 -114302908 + (A)n Simple_repeat Simple_repeat 1 25 0 189 149 0 164 chr10 26013862 26013929 -114302836 - MER5A DNA MER1_type -75 114 59 2230 113 33 0 chr10 26014386 26014688 -114302077 + AluSx SINE Alu 1 312 0 2526 140 16 21 chr10 26015212 26015640 -114301125 + MSTB LTR MaLR 1 426 0 1989 140 3 16 chr10 26016001 26016309 -114300456 - AluSx SINE Alu -8 304 1 29 47 0 0 chr10 26016401 26016444 -114300321 + AT_rich Low_complexity Low_complexity 1 43 0 1252 145 69 28 chr10 26016444 26016733 -114300032 + L1MA4 LINE L1 6000 6300 0 2145 130 10 0 chr10 26016833 26017140 -114299625 - AluSq SINE Alu -3 310 1 205 270 96 35 chr10 26018099 26018214 -114298551 - MIR SINE MIR -56 206 85 642 254 62 31 chr10 26018577 26018770 -114297995 - MIR3 SINE MIR -7 201 3 183 129 0 0 chr10 26018874 26018905 -114297860 + (TCCC)n Simple_repeat Simple_repeat 4 34 0 1814 134 3 59 chr10 26020670 26020784 -114295981 + AluJo SINE Alu 14 133 -179 2792 10 0 0 chr10 26020784 26021082 -114295683 - AluYa5 SINE Alu -13 298 1 1814 134 3 59 chr10 26021082 26021272 -114295493 + AluJo SINE Alu 133 301 -11 346 210 3 10 chr10 26021319 26021411 -114295354 + L1MB3 LINE L1 5879 5968 -203 1294 134 0 6 chr10 26021418 26021597 -114295168 + AluSx SINE Alu 1 178 -134 840 120 0 0 chr10 26021652 26021769 -114294996 + AluSx SINE Alu 183 299 -13 1061 172 14 9 chr10 26021770 26021985 -114294780 + L1MB3 LINE L1 5960 6175 -8 498 317 0 7 chr10 26022197 26022339 -114294426 - MIR3 SINE MIR -38 170 30 2080 127 3 7 chr10 26022364 26022663 -114294102 + AluSx SINE Alu 1 298 -14 452 208 13 67 chr10 26022792 26022855 -114293910 - L1MA10 LINE L1 0 6334 6272 2601 235 63 12 chr10 26022855 26023288 -114293477 - L1ME1 LINE L1 -44 6122 5713 2040 223 57 30 chr10 26023288 26023831 -114292934 + MER74A LTR ERVL 1 558 0 2601 235 63 12 chr10 26023831 26024425 -114292340 - L1ME1 LINE L1 -453 5713 5039 712 243 76 5 chr10 26024436 26024646 -114292119 + L1ME LINE L1 5330 5554 -612 553 166 137 2 chr10 26026177 26026320 -114290445 + L1ME LINE L1 5542 5666 -500 2207 88 0 14 chr10 26026323 26026619 -114290146 + AluY SINE Alu 1 292 -19 1986 207 50 53 chr10 26026678 26027340 -114289425 - L1ME1 LINE L1 -1131 5015 4356 1881 215 80 48 chr10 26029427 26029952 -114286813 - MLT1F LTR MaLR 0 542 1 302 327 18 18 chr10 26030057 26030222 -114286543 + MIR3 SINE MIR 31 195 -13 658 164 0 49 chr10 26030704 26030826 -114285939 + FLAM_A SINE Alu 5 120 -13 25 31 0 0 chr10 26030826 26030858 -114285907 + AT_rich Low_complexity Low_complexity 1 32 0 632 299 79 17 chr10 26031100 26031391 -114285374 + L2 LINE L2 3005 3313 0 1128 174 58 47 chr10 26033168 26033279 -114283486 + L1MA4 LINE L1 6022 6130 -170 1709 153 49 17 chr10 26033279 26033566 -114283199 + AluSx SINE Alu 1 296 -16 1128 174 58 47 chr10 26033566 26033729 -114283036 + L1MA4 LINE L1 6130 6299 -1 354 45 0 0 chr10 26034096 26034140 -114282625 + (TG)n Simple_repeat Simple_repeat 2 45 0 1437 185 182 3 chr10 26034568 26034881 -114281884 - MSTD LTR MaLR 0 396 28 280 274 154 10 chr10 26035037 26035238 -114281527 - MIR SINE MIR 0 262 33 182 324 49 29 chr10 26036089 26036191 -114280574 + L2 LINE L2 2793 2896 -418 225 270 270 0 chr10 26036247 26036358 -114280407 + L2 LINE L2 3105 3245 -68 1844 105 67 8 chr10 26038346 26038664 -114278101 + AluSp SINE Alu 1 334 0 535 318 14 14 chr10 26038714 26038925 -114277840 - MIR SINE MIR -15 247 37 787 316 16 0 chr10 26039241 26039491 -114277274 + MIR SINE MIR 9 262 0 3508 114 4 52 chr10 26039799 26040353 -114276412 + MER1A DNA MER1_type 1 527 0 792 224 33 17 chr10 26041306 26041514 -114275251 + MLT1C LTR MaLR 272 464 -3 2290 87 2 107 chr10 26041548 26041676 -114275089 - L1PB1 LINE L1 0 6151 6011 201 39 0 0 chr10 26041676 26041702 -114275063 + (TTG)n Simple_repeat Simple_repeat 1 26 0 1977 126 3 18 chr10 26041702 26041988 -114274777 - AluSx SINE Alu -30 282 1 2290 87 2 107 chr10 26041988 26042259 -114274506 - L1PB1 LINE L1 -138 6013 5793 222 118 0 0 chr10 26042259 26042293 -114274472 + (TG)n Simple_repeat Simple_repeat 2 35 0 652 130 46 0 chr10 26042298 26042406 -114274359 - L1PB1 LINE L1 -251 5900 5788 8570 159 56 44 chr10 26042406 26044080 -114272685 - pTR5 LTR ERV1 -3 2435 743 360 0 0 0 chr10 26044085 26044125 -114272640 + (TA)n Simple_repeat Simple_repeat 2 41 0 1280 140 26 50 chr10 26044157 26044416 -114272349 - L1MC2 LINE L1 -328 5793 5583 192 304 14 0 chr10 26045138 26045207 -114271558 - MIR SINE MIR -72 190 121 915 212 113 92 chr10 26045801 26046047 -114270718 - MER34 LTR ERV1 0 542 303 2281 118 98 28 chr10 26046047 26046406 -114270359 + MSTA LTR MaLR 1 392 -36 2096 140 7 3 chr10 26046406 26046714 -114270051 - AluSx SINE Alu -3 309 1 2281 118 98 28 chr10 26046714 26046754 -114270011 + MSTA LTR MaLR 392 428 0 915 212 113 92 chr10 26046754 26047048 -114269717 - MER34 LTR ERV1 -239 303 1 1606 124 0 0 chr10 26047104 26047321 -114269444 - AluSg/x SINE Alu -3 307 91 622 315 126 38 chr10 26047869 26048755 -114268010 - L2 LINE L2 0 3272 2307 1957 126 0 21 chr10 26048981 26049266 -114267499 + AluSx SINE Alu 1 279 -33 306 0 0 0 chr10 26049266 26049300 -114267465 + (CA)n Simple_repeat Simple_repeat 1 34 0 2435 188 58 0 chr10 26049704 26050135 -114266630 + MSTB2 LTR MaLR 2 457 0 210 233 14 27 chr10 26050201 26050274 -114266491 + CT-rich Low_complexity Low_complexity 1 72 0 706 320 58 28 chr10 26050441 26050800 -114265965 - L3 LINE CR1 -62 1515 1146 2093 139 0 0 chr10 26052340 26052634 -114264131 + AluSq SINE Alu 1 294 -19 1048 163 6 0 chr10 26052637 26052803 -114263962 + AluSg/x SINE Alu 126 292 -18 518 283 134 10 chr10 26052933 26053223 -114263542 - HAL1b LINE L1 -586 762 437 2013 146 3 0 chr10 26053435 26053736 -114263029 + AluSx SINE Alu 1 302 -10 2291 103 3 0 chr10 26054435 26054735 -114262030 + AluSp SINE Alu 1 301 -12 1977 125 48 0 chr10 26054742 26055031 -114261734 + AluSx SINE Alu 1 303 -9 2545 74 0 3 chr10 26055650 26055961 -114260804 + AluY SINE Alu 1 310 -1 347 262 24 16 chr10 26055961 26056087 -114260678 + MIR SINE MIR 117 243 -19 21 36 0 0 chr10 26056255 26056283 -114260482 + AT_rich Low_complexity Low_complexity 1 28 0 2315 178 29 43 chr10 26056332 26056559 -114260206 - MER39 LTR ERV1 0 707 478 1829 154 0 35 chr10 26056559 26056870 -114259895 + AluJo SINE Alu 1 300 -12 2315 178 29 43 chr10 26056870 26057149 -114259616 - MER39 LTR ERV1 -229 478 5 1660 174 52 0 chr10 26057738 26058025 -114258740 + AluJb SINE Alu 1 302 -10 1164 96 128 41 chr10 26058206 26058425 -114258340 + L1MA1 LINE L1 6065 6302 0 737 249 70 91 chr10 26058544 26058586 -114258179 - MER39 LTR ERV1 -65 584 543 2002 130 35 0 chr10 26058586 26058870 -114257895 - AluSx SINE Alu -18 294 1 737 249 70 91 chr10 26058870 26059304 -114257461 - MER39 LTR ERV1 -106 543 1 1663 192 7 17 chr10 26059604 26059906 -114256859 - AluJo SINE Alu -11 301 3 820 137 0 46 chr10 26059920 26060051 -114256714 - FLAM_C SINE Alu -8 125 1 405 0 0 0 chr10 26060628 26060673 -114256092 + (CA)n Simple_repeat Simple_repeat 2 46 0 2187 127 3 0 chr10 26060732 26061032 -114255733 + AluSx SINE Alu 1 301 -11 1048 163 6 0 chr10 26061237 26061403 -114255362 - AluSg/x SINE Alu -18 294 128 2093 139 0 0 chr10 26061406 26061700 -114255065 - AluSq SINE Alu -19 294 1 706 320 58 28 chr10 26063240 26063599 -114253166 + L3 LINE CR1 1146 1515 -62 210 233 14 27 chr10 26063766 26063839 -114252926 + GA-rich Low_complexity Low_complexity 1 72 0 2435 188 58 0 chr10 26063905 26064336 -114252429 - MSTB2 LTR MaLR 0 457 2 306 0 0 0 chr10 26064740 26064774 -114251991 + (TG)n Simple_repeat Simple_repeat 1 34 0 1115 130 35 30 chr10 26064774 26064974 -114251791 - AluSg/x SINE Alu -33 277 77 180 77 0 0 chr10 26065087 26065113 -114251652 + (TTCC)n Simple_repeat Simple_repeat 1 26 0 500 229 0 0 chr10 26065114 26065219 -114251546 - FLAM_A SINE Alu -37 105 1 1407 161 6 114 chr10 26065300 26065641 -114251124 - AluJb SINE Alu -8 304 1 359 257 133 40 chr10 26065834 26066060 -114250705 + LTR33 LTR ERVL 271 517 -4 1779 148 7 24 chr10 26066580 26066870 -114249895 + AluJo SINE Alu 1 285 -27 324 0 0 0 chr10 26066870 26066906 -114249859 + (CA)n Simple_repeat Simple_repeat 2 37 0 327 192 90 0 chr10 26066919 26066997 -114249768 + MER53 DNA DNA 105 189 0 368 217 0 0 chr10 26067664 26067733 -114249032 - L2 LINE L2 0 3313 3245 762 171 0 0 chr10 26069272 26069395 -114247370 + AluJ SINE Alu 11 133 -179 309 314 11 59 chr10 26069476 26069747 -114247018 + MLT1J LTR MaLR 3 260 -251 1472 139 0 0 chr10 26070401 26070610 -114246155 + AluSg/x SINE Alu 92 300 -10 747 185 6 67 chr10 26070635 26070813 -114245952 + AluJ SINE Alu 118 284 -28 771 267 19 77 chr10 26071689 26071736 -114245029 - MLT1A1 LTR MaLR -2 363 315 2245 110 7 0 chr10 26071736 26072044 -114244721 - AluSx SINE Alu -2 310 1 771 267 19 77 chr10 26072044 26072359 -114244406 - MLT1A1 LTR MaLR -50 315 22 1775 121 0 27 chr10 26073159 26073457 -114243308 - AluSx SINE Alu -22 290 1 265 284 8 30 chr10 26073769 26073903 -114242862 + CT-rich Low_complexity Low_complexity 4 134 0 382 214 12 0 chr10 26074320 26074404 -114242361 + L1MB1 LINE L1 6060 6144 -24 225 0 0 0 chr10 26074404 26074429 -114242336 + (TG)n Simple_repeat Simple_repeat 2 26 0 787 223 29 6 chr10 26074615 26074790 -114241975 - MIR SINE MIR -61 201 23 26 64 0 0 chr10 26075657 26075704 -114241061 + AT_rich Low_complexity Low_complexity 1 47 0 1525 274 29 35 chr10 26075828 26076339 -114240426 + MLT1E3 LTR MaLR 26 533 -91 249 258 117 62 chr10 26076954 26077082 -114239683 + L1MC/D LINE L1 5620 5754 -2054 1315 216 3 30 chr10 26077445 26077746 -114239019 + AluJo SINE Alu 1 293 -19 1404 126 0 23 chr10 26078291 26078506 -114238259 - AluSx SINE Alu -102 210 1 277 219 16 16 chr10 26078758 26078822 -114237943 - MER20B DNA MER1_type -696 87 24 188 325 136 26 chr10 26081991 26082145 -114234620 - L2 LINE L2 -993 2321 2151 680 264 72 48 chr10 26082390 26082432 -114234333 + MIR SINE MIR 1 41 -221 809 208 141 14 chr10 26082432 26082716 -114234049 + MER33 DNA MER1_type 5 324 0 680 264 72 48 chr10 26082716 26082923 -114233842 + MIR SINE MIR 41 256 -6 2398 78 0 0 chr10 26082924 26083231 -114233534 - AluSx SINE Alu -1 311 5 856 166 43 11 chr10 26086034 26086221 -114230544 + MER63 DNA MER1_type 12 204 -857 1548 199 3 13 chr10 26086954 26087256 -114229509 - AluJo SINE Alu -11 301 3 828 137 0 46 chr10 26087270 26087401 -114229364 - FLAM_C SINE Alu -8 125 1 966 84 15 0 chr10 26087822 26087953 -114228812 - AluSq/x SINE Alu -180 133 1 354 98 0 0 chr10 26089301 26089352 -114227413 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1917 121 4 0 chr10 26089357 26089630 -114227135 - AluSg SINE Alu -36 274 1 408 127 25 14 chr10 26090205 26090291 -114226474 + AluS SINE Alu 1 60 -243 431 187 36 92 chr10 26090583 26090834 -114225931 + AluSg1 SINE Alu 5 241 -68 233 384 53 8 chr10 26090858 26090991 -114225774 - L2 LINE L2 -12 3260 3122 1592 176 0 40 chr10 26091199 26091522 -114225243 + AluJo SINE Alu 1 310 -2 670 128 0 20 chr10 26091681 26091783 -114224982 - MSTC LTR MaLR -327 101 2 695 209 0 53 chr10 26092514 26092701 -114224064 + FRAM SINE Alu 1 176 0 369 290 97 39 chr10 26092770 26092977 -114223788 + Charlie8 DNA MER1_type 103 321 -2096 1968 131 3 19 chr10 26093304 26093617 -114223148 + AluSx SINE Alu 1 308 -4 876 191 30 61 chr10 26093626 26093857 -114222908 + AluJb SINE Alu 85 308 -4 312 27 0 0 chr10 26095043 26095080 -114221685 + (TG)n Simple_repeat Simple_repeat 1 37 0 1878 85 25 2 chr10 26096803 26097079 -114219686 - L1PA8 LINE L1 -183 5989 5709 1571 160 16 26 chr10 26098405 26098712 -114218053 + AluJo SINE Alu 1 304 -8 361 330 0 0 chr10 26098718 26098821 -114217944 - MER5A DNA MER1_type -83 106 4 208 326 93 12 chr10 26100677 26100763 -114216002 + MIR SINE MIR 52 144 -64 1328 169 8 16 chr10 26101037 26101279 -114215486 + THE1A LTR MaLR 1 240 -115 2218 117 0 3 chr10 26102104 26102413 -114214352 - AluSx SINE Alu -3 309 2 214 234 0 31 chr10 26102537 26102601 -114214164 + (CATA)n Simple_repeat Simple_repeat 2 63 0 1440 133 0 0 chr10 26103160 26103370 -114213395 - MSTC LTR MaLR -218 210 1 504 293 128 65 chr10 26103439 26103962 -114212803 - L1M4 LINE L1 -3250 2896 2341 1498 123 8 41 chr10 26103998 26104242 -114212523 + MER46A DNA MER2_type 1 236 0 1523 108 23 0 chr10 26104281 26104495 -114212270 + AluSx SINE Alu 1 219 -93 356 170 0 0 chr10 26104596 26104649 -114212116 - AluS SINE Alu -231 68 16 283 252 27 88 chr10 26104657 26104804 -114211961 - MIR SINE MIR -107 155 18 807 208 0 40 chr10 26105017 26105190 -114211575 + FRAM SINE Alu 8 173 -3 1808 139 17 7 chr10 26105649 26105943 -114210822 - AluSx SINE Alu -15 297 1 667 283 84 32 chr10 26108227 26108585 -114208180 - L2 LINE L2 0 3313 2898 286 164 91 0 chr10 26108920 26108975 -114207790 - AluJo SINE Alu -153 149 90 521 308 24 14 chr10 26108978 26109186 -114207579 + L2 LINE L2 2504 2713 -601 1137 138 94 0 chr10 26109199 26109230 -114207535 + AluJo SINE Alu 89 116 -196 582 28 0 0 chr10 26109230 26109302 -114207463 + (CAATA)n Simple_repeat Simple_repeat 2 73 0 1137 138 94 0 chr10 26109302 26109473 -114207292 + AluJo SINE Alu 116 310 -2 657 260 60 97 chr10 26109481 26109768 -114206997 + L2 LINE L2 2739 3105 -208 911 138 26 62 chr10 26109768 26109963 -114206802 - MER53 DNA DNA 0 189 2 657 260 60 97 chr10 26109963 26110165 -114206600 + L2 LINE L2 3105 3313 0 219 244 35 116 chr10 26110174 26110260 -114206505 - L3 LINE CR1 -136 1441 1363 916 127 58 5 chr10 26111797 26112002 -114204763 - AluY SINE Alu -95 216 1 1624 177 10 10 chr10 26112002 26112307 -114204458 - AluJo SINE Alu -6 306 2 1191 164 5 14 chr10 26113002 26113209 -114203556 + AluJo SINE Alu 3 207 -105 675 76 54 0 chr10 26113635 26113727 -114203038 - MER41A LTR ERV1 -4 550 454 971 129 5 86 chr10 26113729 26113915 -114202850 - AluSg/x SINE Alu 0 310 140 2174 117 0 0 chr10 26114117 26114424 -114202341 - AluY SINE Alu -3 308 2 1912 96 0 74 chr10 26114425 26114748 -114202017 - AluSq SINE Alu -14 299 1 516 195 65 0 chr10 26115196 26115319 -114201446 + MER94 DNA DNA 1 131 -3 22 56 0 0 chr10 26115431 26115467 -114201298 + AT_rich Low_complexity Low_complexity 1 36 0 180 328 17 59 chr10 26116349 26116468 -114200297 - MIR3 SINE MIR -1 207 94 2320 63 0 7 chr10 26116990 26117291 -114199474 - AluY SINE Alu -12 299 1 1787 133 10 20 chr10 26117613 26117914 -114198851 - AluJo SINE Alu -10 302 5 195 69 0 0 chr10 26118816 26118845 -114197920 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 1839 107 0 49 chr10 26120299 26120626 -114196139 + AluY SINE Alu 1 311 0 423 160 0 0 chr10 26121173 26121248 -114195517 + (TG)n Simple_repeat Simple_repeat 2 76 0 704 202 0 0 chr10 26121559 26121678 -114195087 - FLAM_A SINE Alu -10 123 5 300 240 156 10 chr10 26121773 26121869 -114194896 - MER81 DNA DNA 0 114 5 2051 145 0 0 chr10 26122223 26122519 -114194246 + AluSx SINE Alu 1 296 -16 698 157 0 0 chr10 26124147 26124255 -114192510 + FLAM_C SINE Alu 2 109 -34 3391 65 11 11 chr10 26125356 26125802 -114190963 - MER41A LTR ERV1 -108 446 1 856 156 0 120 chr10 26126247 26126439 -114190326 - AluJb SINE Alu -8 304 136 1737 119 95 41 chr10 26126864 26127159 -114189606 - AluSx SINE Alu -1 311 1 1015 179 0 22 chr10 26127434 26127618 -114189147 + AluJb SINE Alu 133 312 0 340 254 40 48 chr10 26127957 26128083 -114188682 - MIR3 SINE MIR -52 156 32 2264 107 0 3 chr10 26128526 26128824 -114187941 - AluSx SINE Alu -15 297 1 207 0 0 0 chr10 26129716 26129739 -114187026 + (A)n Simple_repeat Simple_repeat 1 23 0 254 338 106 7 chr10 26131268 26131419 -114185346 - MIR3 SINE MIR -3 205 40 944 201 0 0 chr10 26131701 26131850 -114184915 + AluJb SINE Alu 134 282 -30 224 211 0 0 chr10 26131962 26132014 -114184751 + (CA)n Simple_repeat Simple_repeat 1 52 0 2693 36 0 3 chr10 26132253 26132562 -114184203 - AluY SINE Alu -3 308 1 1405 224 0 14 chr10 26133009 26133295 -114183470 + AluJo SINE Alu 12 293 -19 1684 170 31 14 chr10 26134136 26134430 -114182335 + AluJo SINE Alu 1 299 -13 2080 137 7 0 chr10 26134884 26135183 -114181582 + AluSx SINE Alu 1 301 -11 2367 83 7 0 chr10 26136014 26136314 -114180451 + AluY SINE Alu 1 302 -9 1262 168 9 23 chr10 26136419 26136639 -114180126 + AluSg/x SINE Alu 87 303 -7 2245 100 0 7 chr10 26137527 26137827 -114178938 - AluSx SINE Alu -14 298 1 201 182 0 0 chr10 26138152 26138185 -114178580 + A-rich Low_complexity Low_complexity 1 33 0 687 112 0 0 chr10 26138440 26138547 -114178218 + (TC)n Simple_repeat Simple_repeat 2 108 0 1520 154 3 68 chr10 26138548 26138841 -114177924 - AluJo SINE Alu -38 274 1 216 353 60 17 chr10 26139362 26139478 -114177287 - L2 LINE L2 -32 3281 3161 2366 104 0 0 chr10 26139778 26140076 -114176689 - AluSx SINE Alu -14 298 1 252 231 0 0 chr10 26140158 26140210 -114176555 + LTR30 LTR ERV1 1 52 -670 1001 191 40 56 chr10 26140210 26140514 -114176251 + LTR12 LTR ERV1 53 2032 -406 364 149 15 0 chr10 26140514 26140581 -114176184 + LTR30 LTR ERV1 551 618 -104 590 129 58 79 chr10 26140581 26140720 -114176045 + LTR12 LTR ERV1 352 487 -227 717 171 0 16 chr10 26141195 26141318 -114175447 - FLAM_C SINE Alu -21 122 2 7490 21 0 0 chr10 26142072 26142918 -114173847 + L1PA2 LINE L1 5297 6142 -13 1651 183 3 7 chr10 26142948 26143243 -114173522 + AluJo SINE Alu 1 294 -18 1970 161 0 0 chr10 26143931 26144235 -114172530 - AluJo SINE Alu -8 304 1 186 43 0 0 chr10 26145893 26145916 -114170849 + (CA)n Simple_repeat Simple_repeat 1 23 0 372 22 0 0 chr10 26146957 26147002 -114169763 + (TG)n Simple_repeat Simple_repeat 2 46 0 347 299 82 8 chr10 26147843 26147977 -114168788 + MIR SINE MIR 48 191 -71 1801 127 38 31 chr10 26148139 26148430 -114168335 - AluJb SINE Alu -19 293 1 224 175 0 0 chr10 26148443 26148483 -114168282 - MIR SINE MIR -114 148 109 24 0 0 0 chr10 26148651 26148675 -114168090 + AT_rich Low_complexity Low_complexity 1 24 0 5369 116 51 4 chr10 26149404 26150402 -114166363 - L1PA16 LINE L1 -1 6165 5111 1924 169 19 16 chr10 26150551 26150923 -114165842 - L1PB4 LINE L1 -3 6153 5781 238 271 13 0 chr10 26150927 26151078 -114165687 + (TA)n Simple_repeat Simple_repeat 1 153 0 2059 148 3 0 chr10 26151837 26152148 -114164617 - AluSx SINE Alu 0 312 1 1521 214 3 23 chr10 26152922 26153221 -114163544 - AluJb SINE Alu -19 293 1 245 258 117 62 chr10 26153584 26153712 -114163053 - L1MC/D LINE L1 -2054 5754 5620 1793 167 17 0 chr10 26154020 26154307 -114162458 + AluSx SINE Alu 2 293 -19 183 80 0 0 chr10 26154398 26154423 -114162342 + (TTTTC)n Simple_repeat Simple_repeat 1 25 0 842 64 0 0 chr10 26154446 26154556 -114162209 - L1PA13 LINE L1 -3 6160 6051 813 121 0 57 chr10 26154573 26154713 -114162052 - FLAM_C SINE Alu -11 132 1 2304 84 0 17 chr10 26154798 26155096 -114161669 + AluY SINE Alu 1 293 -18 2587 68 3 0 chr10 26155672 26155981 -114160784 + AluSq SINE Alu 1 310 -3 372 96 5 35 chr10 26157723 26157789 -114158976 - Alu SINE Alu -9 293 240 24 32 0 0 chr10 26158194 26158225 -114158540 + AT_rich Low_complexity Low_complexity 1 31 0 1196 201 3 81 chr10 26158665 26158774 -114157991 + AluJo SINE Alu 29 145 -167 2147 111 3 3 chr10 26158774 26159063 -114157702 + AluSx SINE Alu 1 289 -23 1196 201 3 81 chr10 26159063 26159261 -114157504 + AluJo SINE Alu 145 312 0 372 290 97 39 chr10 26159330 26159537 -114157228 + Charlie8 DNA MER1_type 103 321 -2096 249 301 68 110 chr10 26159594 26159813 -114156952 + MIR SINE MIR 34 243 -19 1560 191 7 7 chr10 26160131 26160419 -114156346 + AluJo SINE Alu 6 293 -19 183 80 0 0 chr10 26160484 26160509 -114156256 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 230 358 0 18 chr10 26160533 26160642 -114156123 - L2 LINE L2 -43 3229 3123 832 107 0 107 chr10 26160690 26160839 -114155926 + FLAM_C SINE Alu 1 133 0 444 147 0 0 chr10 26161475 26161550 -114155215 + (TG)n Simple_repeat Simple_repeat 2 76 0 555 129 73 8 chr10 26161710 26161834 -114154931 + L1MC3 LINE L1 5267 5398 -2387 * 5392 188 59 75 chr10 26161824 26163760 -114153005 + L1PA16 LINE L1 4212 6177 11 2135 137 0 10 chr10 26163760 26164073 -114152692 + AluSg SINE Alu 1 310 0 5392 188 59 75 chr10 26164073 26164274 -114152491 + L1PA16 LINE L1 6177 6380 214 1909 162 7 7 chr10 26164274 26164582 -114152183 - AluSx SINE Alu -4 308 1 5392 188 59 75 chr10 26164582 26164835 -114151930 + L1PA16 LINE L1 6380 6636 470 2397 99 3 0 chr10 26164835 26165147 -114151618 + AluSp SINE Alu 1 313 0 5392 188 59 75 chr10 26165147 26165761 -114151004 + L1PA16 LINE L1 6636 7258 1092 760 167 17 0 chr10 26165761 26165881 -114150884 - FLAM_C SINE Alu -20 123 2 5392 188 59 75 chr10 26165881 26165895 -114150870 + L1PA16 LINE L1 7258 5936 -230 2299 88 10 0 chr10 26165895 26166189 -114150576 - AluY SINE Alu -14 297 1 5392 188 59 75 chr10 26166189 26166417 -114150348 + L1PA16 LINE L1 5935 6165 -1 1044 194 4 66 chr10 26166426 26166668 -114150097 + L1MC3 LINE L1 6201 6427 -1358 1000 169 39 10 chr10 26166681 26166888 -114149877 + L1MC3 LINE L1 7570 7782 -3 2423 82 3 0 chr10 26167134 26167438 -114149327 - AluY SINE Alu -6 305 1 2165 122 0 3 chr10 26167783 26168079 -114148686 + AluSq SINE Alu 1 295 -18 1958 118 0 83 chr10 26169569 26169907 -114146858 - AluSx SINE Alu -2 310 1 2378 69 16 0 chr10 26170448 26170754 -114146011 + AluY SINE Alu 1 311 0 321 330 0 0 chr10 26172527 26172630 -114144135 + MER5A DNA MER1_type 4 106 -83 1730 159 13 26 chr10 26172636 26172944 -114143821 - AluJo SINE Alu -8 304 1 1844 132 34 20 chr10 26174113 26174408 -114142357 - AluSq SINE Alu -14 299 1 1923 148 0 7 chr10 26175035 26175326 -114141439 + AluJb SINE Alu 6 294 -18 247 337 27 60 chr10 26175821 26176005 -114140760 + MIR3 SINE MIR 16 193 -15 4086 196 42 50 chr10 26176676 26177229 -114139536 - L1MD2 LINE L1 -197 6145 5589 2296 114 0 0 chr10 26177229 26177536 -114139229 - AluSg SINE Alu -3 307 1 4086 196 42 50 chr10 26177536 26177567 -114139198 - L1MD2 LINE L1 -753 5589 5559 1711 162 7 16 chr10 26177567 26177870 -114138895 + AluJb SINE Alu 5 304 -8 4086 196 42 50 chr10 26177870 26178284 -114138481 - L1MD2 LINE L1 -783 5559 5153 2189 116 0 0 chr10 26178284 26178576 -114138189 + AluSq SINE Alu 1 292 -21 4086 196 42 50 chr10 26178576 26178871 -114137894 - L1MD2 LINE L1 -1189 5153 4857 753 99 40 0 chr10 26178871 26178972 -114137793 - AluSq/x SINE Alu -206 107 3 540 161 21 0 chr10 26178986 26179079 -114137686 + L1M4 LINE L1 5189 5283 -863 3628 230 67 29 chr10 26179082 26179284 -114137481 - L1MD2 LINE L1 -1280 4849 4656 2491 70 0 10 chr10 26179284 26179598 -114137167 - AluY SINE Alu 0 311 1 3628 230 67 29 chr10 26179598 26180493 -114136272 - L1MD2 LINE L1 -1473 4656 3711 490 280 87 32 chr10 26180487 26180618 -114136147 - L1MD2 LINE L1 -853 1637 1515 * 180 0 0 0 chr10 26180618 26180638 -114136127 + (TA)n Simple_repeat Simple_repeat 2 21 0 490 280 87 32 chr10 26180638 26180823 -114135942 - L1MD2 LINE L1 -975 1515 1342 348 24 0 0 chr10 26180823 26180864 -114135901 + (TG)n Simple_repeat Simple_repeat 2 42 0 490 280 87 32 chr10 26180864 26181124 -114135641 - L1MD2 LINE L1 -1148 1342 984 809 227 91 12 chr10 26181295 26181537 -114135228 + MLT1I LTR MaLR 149 409 0 26 30 0 0 chr10 26181945 26181978 -114134787 + AT_rich Low_complexity Low_complexity 1 33 0 217 302 0 0 chr10 26182624 26182687 -114134078 - MIR SINE MIR -13 249 187 2542 152 25 23 chr10 26182702 26182751 -114134014 + Tigger2a DNA MER2_type 1 48 -2660 3595 202 79 4 chr10 26182751 26183434 -114133331 + MER50 LTR ERV1 1 734 0 2542 152 25 23 chr10 26183434 26183817 -114132948 + Tigger2a DNA MER2_type 48 434 0 219 216 307 0 chr10 26183818 26183906 -114132859 - MIR SINE MIR -90 172 58 245 309 0 15 chr10 26184263 26184331 -114132434 + MIR SINE MIR 4 70 -192 198 300 20 0 chr10 26184342 26184392 -114132373 + MIR SINE MIR 211 261 -1 2010 104 82 4 chr10 26184435 26184714 -114132051 + AluSg SINE Alu 1 301 -9 1208 246 104 26 chr10 26184786 26185426 -114131339 + L2 LINE L2 2527 3231 -82 2063 103 0 0 chr10 26185576 26185849 -114130916 - AluSx SINE Alu -39 273 1 1282 178 38 48 chr10 26185930 26186222 -114130543 + AluJo SINE Alu 1 289 -23 784 190 110 0 chr10 26186847 26187010 -114129755 + MER5A DNA MER1_type 9 189 0 1891 179 81 27 chr10 26188003 26188372 -114128393 - MLT1B LTR MaLR -1 389 1 21 0 0 0 chr10 26188948 26188969 -114127796 + AT_rich Low_complexity Low_complexity 1 21 0 2287 125 3 0 chr10 26190259 26190570 -114126195 + AluSq SINE Alu 1 312 -1 217 274 0 0 chr10 26191303 26191354 -114125411 + CT-rich Low_complexity Low_complexity 2 52 0 594 75 0 0 chr10 26191372 26191452 -114125313 + (TTCC)n Simple_repeat Simple_repeat 1 80 0 198 71 0 0 chr10 26192064 26192092 -114124673 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 1409 64 0 6 chr10 26192341 26192514 -114124251 - L1PA5 LINE L1 -1 6153 5982 13974 52 6 2 chr10 26192614 26194961 -114121804 - L1PA5 LINE L1 -143 6011 3658 1703 167 7 24 chr10 26195156 26195471 -114121294 + AluJo SINE Alu 1 310 0 205 287 30 20 chr10 26195729 26195830 -114120935 - L3b LINE CR1 -175 1408 1307 204 371 0 0 chr10 26196267 26196337 -114120428 + L3b LINE CR1 1296 1365 -218 525 248 8 0 chr10 26197083 26197200 -114119565 - MER96B DNA MER1_type? -2 415 298 2015 82 4 11 chr10 26197203 26197472 -114119293 + AluY SINE Alu 5 271 -40 313 139 7 7 chr10 26197625 26197713 -114119052 - L1ME LINE L1 -366 5785 5695 204 289 122 0 chr10 26197715 26197805 -114118960 - MIR SINE MIR -92 116 16 201 133 0 0 chr10 26198925 26198955 -114117810 + (TG)n Simple_repeat Simple_repeat 2 31 0 2304 289 137 25 chr10 26199654 26200525 -114116240 + L2 LINE L2 1715 2487 -826 2086 102 51 0 chr10 26200525 26200800 -114115965 - AluSx SINE Alu -23 289 1 2304 289 137 25 chr10 26200800 26201361 -114115404 + L2 LINE L2 2487 3312 -1 2281 122 0 0 chr10 26202439 26202743 -114114022 - AluSq SINE Alu -9 304 1 1214 276 18 38 chr10 26203821 26204216 -114112549 - MER115 DNA AcHobo -25 668 282 1481 164 19 58 chr10 26205276 26205588 -114111177 - AluJo SINE Alu -12 300 1 2189 102 26 10 chr10 26206224 26206528 -114110237 + AluSx SINE Alu 2 310 -2 588 220 75 31 chr10 26206806 26206965 -114109800 + MIR SINE MIR 92 257 -5 471 296 11 21 chr10 26207131 26207320 -114109445 - L1ME3A LINE L1 -206 5964 5778 666 290 101 38 chr10 26207457 26208295 -114108470 - L1ME3A LINE L1 -597 5573 4685 243 0 0 0 chr10 26208317 26208344 -114108421 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1925 157 0 3 chr10 26208346 26208633 -114108132 - AluSx SINE Alu -26 286 1 492 328 153 16 chr10 26208700 26209216 -114107549 - L1ME3A LINE L1 -1830 4316 3730 2908 90 6 11 chr10 26209247 26209613 -114107152 - THE1B LTR MaLR 0 364 1 296 68 0 0 chr10 26210231 26210275 -114106490 - AluY SINE Alu 0 301 258 1786 109 0 49 chr10 26210375 26210642 -114106123 - AluY SINE Alu -57 254 1 1864 157 28 0 chr10 26210715 26210877 -114105888 - AluSx SINE Alu -17 295 120 1954 100 0 4 chr10 26210877 26211137 -114105628 - AluSc SINE Alu -4 305 47 1864 157 28 0 chr10 26211137 26211261 -114105504 - AluSx SINE Alu -192 120 1 21 0 0 0 chr10 26211493 26211514 -114105251 + AT_rich Low_complexity Low_complexity 1 21 0 257 290 75 47 chr10 26211841 26211948 -114104817 + L2 LINE L2 3162 3271 -1 2385 88 3 0 chr10 26212021 26212326 -114104439 - AluSc SINE Alu -3 306 1 570 190 17 31 chr10 26212732 26212895 -114103870 + MER69 DNA AcHobo 9 2526 0 471 333 125 27 chr10 26212939 26213387 -114103378 - L1ME4a LINE L1 -223 5898 5407 2020 129 3 10 chr10 26213766 26214060 -114102705 + AluSx SINE Alu 1 292 -20 941 242 62 0 chr10 26214484 26214711 -114102054 + MIR SINE MIR 14 254 -8 989 283 114 37 chr10 26214775 26215485 -114101280 + L2 LINE L2 2522 3313 0 1232 216 42 19 chr10 26215738 26216048 -114100717 + L1ME1 LINE L1 5818 6134 -32 2476 113 21 16 chr10 26216054 26216433 -114100332 - L1PB1 LINE L1 -1 6150 5770 1742 147 3 11 chr10 26216470 26216755 -114100010 - AluSx SINE Alu -29 283 1 2183 117 0 3 chr10 26217564 26217862 -114098903 + AluSx SINE Alu 1 297 -15 442 139 236 0 chr10 26218219 26218291 -114098474 + AluS SINE Alu 2 90 -222 544 218 20 0 chr10 26218292 26218393 -114098372 - AluJo SINE Alu -125 187 85 1251 223 108 47 chr10 26218553 26218894 -114097871 + MER82 DNA MER2_type 1 362 -291 1174 134 5 37 chr10 26218957 26219144 -114097621 - AluJo SINE Alu -36 276 96 614 131 50 30 chr10 26219178 26219277 -114097488 - AluJo SINE Alu -211 101 1 1134 271 11 4 chr10 26219341 26219614 -114097151 + MER82 DNA MER2_type 379 653 0 500 136 0 12 chr10 26219691 26219772 -114096993 - MADE1 DNA Mariner 0 80 1 1418 181 3 59 chr10 26220452 26220604 -114096161 - AluJo SINE Alu -25 287 159 2249 124 0 0 chr10 26220604 26220903 -114095862 - AluSg SINE Alu -11 299 1 1418 181 3 59 chr10 26220903 26221054 -114095711 - AluJo SINE Alu -153 159 1 2865 93 8 16 chr10 26221454 26221832 -114094933 + THE1C LTR MaLR 1 375 0 349 303 30 8 chr10 26222219 26222351 -114094414 + L3 LINE CR1 1248 1382 -195 288 328 146 5 chr10 26222339 26222531 -114094234 + MIR SINE MIR 23 241 -21 * 209 307 45 34 chr10 26222563 26222651 -114094114 - L2 LINE L2 0 3313 3225 1986 119 59 0 chr10 26222850 26223136 -114093629 - AluSx SINE Alu -9 303 1 200 226 12 36 chr10 26223202 26223286 -114093479 + T-rich Low_complexity Low_complexity 2 83 0 305 263 0 0 chr10 26224138 26224218 -114092547 - MER116 DNA Mariner 0 80 1 2419 85 3 0 chr10 26224526 26224831 -114091934 + AluY SINE Alu 1 306 -5 1000 169 39 10 chr10 26225077 26225284 -114091481 - L1MC3 LINE L1 -3 7782 7570 1044 194 4 66 chr10 26225297 26225539 -114091226 - L1MC3 LINE L1 -1358 6427 6201 5411 188 58 76 chr10 26225548 26225776 -114090989 - L1PA16 LINE L1 -1 6165 5935 2327 85 10 0 chr10 26225776 26226070 -114090695 + AluY SINE Alu 1 297 -14 5411 188 58 76 chr10 26226070 26226084 -114090681 - L1PA16 LINE L1 -231 5935 5922 760 167 17 0 chr10 26226084 26226204 -114090561 + FLAM_C SINE Alu 2 123 -20 5411 188 58 76 chr10 26226204 26226819 -114089946 - L1PA16 LINE L1 -244 5922 5298 2428 96 3 0 chr10 26226819 26227131 -114089634 - AluSp SINE Alu 0 313 1 5411 188 58 76 chr10 26227131 26227384 -114089381 - L1PA16 LINE L1 -868 5298 5042 1916 162 7 7 chr10 26227384 26227692 -114089073 + AluSx SINE Alu 1 308 -4 5411 188 58 76 chr10 26227692 26227893 -114088872 - L1PA16 LINE L1 -1124 5042 4839 2177 131 0 10 chr10 26227893 26228206 -114088559 - AluSg SINE Alu 0 310 1 5411 188 58 76 chr10 26228206 26230148 -114086617 - L1PA16 LINE L1 -1327 4839 4212 555 129 73 8 chr10 26230138 26230262 -114086503 - L1MC3 LINE L1 -2387 5398 5267 * 423 160 0 0 chr10 26230422 26230497 -114086268 + (CA)n Simple_repeat Simple_repeat 2 76 0 2197 92 3 7 chr10 26231041 26231349 -114085416 - AluSx SINE Alu 0 307 1 31 44 0 0 chr10 26233095 26233140 -114083625 + AT_rich Low_complexity Low_complexity 1 45 0 180 152 0 0 chr10 26233424 26233457 -114083308 + GA-rich Low_complexity Low_complexity 3 35 0 189 0 0 0 chr10 26233520 26233541 -114083224 + (GGA)n Simple_repeat Simple_repeat 1 21 0 2275 95 7 0 chr10 26234606 26234900 -114081865 - AluSx SINE Alu -16 296 1 2165 122 0 3 chr10 26235245 26235541 -114081224 + AluSq SINE Alu 1 295 -18 1981 115 0 83 chr10 26237031 26237369 -114079396 - AluSx SINE Alu -2 310 1 2462 49 16 0 chr10 26237909 26238213 -114078552 + AluY SINE Alu 1 309 -2 384 296 82 13 chr10 26239990 26240099 -114076666 + MER5A DNA MER1_type 4 129 -60 1730 159 13 26 chr10 26240099 26240407 -114076358 - AluJo SINE Alu -8 304 1 384 296 82 13 chr10 26240407 26240456 -114076309 + MER5A DNA MER1_type 129 173 -16 292 203 16 16 chr10 26241152 26241216 -114075549 + MER20B DNA MER1_type 24 87 -696 2147 121 0 34 chr10 26241468 26241790 -114074975 + AluSx SINE Alu 1 311 -1 842 226 196 1 chr10 26241906 26242422 -114074343 + MER20B DNA MER1_type 109 783 0 2195 141 0 0 chr10 26242515 26242827 -114073938 + AluSx SINE Alu 1 312 0 1637 169 50 7 chr10 26243411 26243690 -114073075 - AluJo SINE Alu -12 300 10 1729 133 4 4 chr10 26244567 26244815 -114071950 - AluSx SINE Alu -12 300 53 2133 121 0 3 chr10 26244815 26245112 -114071653 - AluSx SINE Alu -16 296 1 2300 102 0 0 chr10 26245762 26246057 -114070708 + AluSx SINE Alu 1 295 -17 2300 137 63 18 chr10 26246057 26246437 -114070328 - LTR32 LTR ERVL -63 408 12 444 266 171 46 chr10 26246521 26246848 -114069917 - L2 LINE L2 -2 3311 2944 751 261 138 68 chr10 26246943 26247017 -114069748 - L2 LINE L2 -499 2815 2748 1976 151 0 7 chr10 26247017 26247315 -114069450 - AluJo SINE Alu -16 296 1 751 261 138 68 chr10 26247315 26247712 -114069053 - L2 LINE L2 -566 2748 2311 34 42 0 0 chr10 26248328 26248376 -114068389 + AT_rich Low_complexity Low_complexity 1 48 0 1207 202 109 8 chr10 26248376 26248633 -114068132 - AluJo SINE Alu -29 283 1 206 317 203 12 chr10 26248750 26249075 -114067690 - L2 LINE L2 -338 2976 2590 1450 215 63 6 chr10 26249197 26249666 -114067099 - MER87 LTR ERV1 0 541 21 212 308 146 23 chr10 26249698 26249958 -114066807 - L2 LINE L2 -882 2432 2141 1819 171 3 31 chr10 26251493 26251814 -114064951 + AluJb SINE Alu 1 312 0 2097 131 7 0 chr10 26252840 26253137 -114063628 + AluSx SINE Alu 1 299 -13 348 127 0 0 chr10 26253137 26253192 -114063573 + (GGGA)n Simple_repeat Simple_repeat 1 55 0 282 116 0 0 chr10 26253336 26253379 -114063386 + (CA)n Simple_repeat Simple_repeat 1 43 0 428 261 29 14 chr10 26253397 26253535 -114063230 - MER103 DNA DNA -25 141 2 334 258 107 13 chr10 26253619 26253778 -114062987 + MIR SINE MIR 32 205 -57 586 266 59 0 chr10 26254217 26254386 -114062379 - MIR SINE MIR -7 255 77 1893 152 0 3 chr10 26254714 26255020 -114061745 + AluJb SINE Alu 1 305 0 22 0 0 0 chr10 26256305 26256327 -114060438 + AT_rich Low_complexity Low_complexity 1 22 0 2215 109 3 10 chr10 26256333 26256635 -114060130 + AluSx SINE Alu 1 300 -12 1722 176 7 3 chr10 26256638 26256927 -114059838 + AluJb SINE Alu 5 294 -18 1737 92 26 0 chr10 26257843 26258070 -114058695 - AluSg/x SINE Alu -10 302 70 2326 78 7 10 chr10 26258659 26258965 -114057800 + AluY SINE Alu 1 305 -6 931 176 0 34 chr10 26259599 26259775 -114056990 + AluJb SINE Alu 137 306 -6 493 222 20 0 chr10 26260318 26260417 -114056348 + MER81 DNA DNA 13 113 -1 732 204 0 0 chr10 26261281 26261413 -114055352 - FLAM_A SINE Alu -1 132 1 803 149 25 19 chr10 26261732 26261893 -114054872 - MER119 DNA MER1_type -54 529 368 623 195 0 16 chr10 26261894 26262022 -114054743 + MLT2D LTR ERVL 2 127 -287 770 145 8 0 chr10 26262022 26262139 -114054626 + FLAM_C SINE Alu 3 120 -13 731 126 20 13 chr10 26262143 26262294 -114054471 + (TAGA)n Simple_repeat Simple_repeat 1 152 0 1361 163 8 54 chr10 26262295 26262553 -114054212 + MLT2D LTR ERVL 121 366 -48 1657 195 62 21 chr10 26262632 26262970 -114053795 - MER119 DNA MER1_type -231 352 1 2443 91 7 0 chr10 26263091 26263399 -114053366 + AluSx SINE Alu 1 310 -2 2490 72 0 13 chr10 26264755 26265059 -114051706 + AluY SINE Alu 1 300 -11 2077 152 61 13 chr10 26265069 26265245 -114051520 + L1MB3 LINE L1 5552 5718 -465 1934 135 20 24 chr10 26265245 26265541 -114051224 + AluSx SINE Alu 1 295 -17 2077 152 61 13 chr10 26265541 26265929 -114050836 + L1MB3 LINE L1 5718 6169 -14 1972 135 0 17 chr10 26265933 26266247 -114050518 - AluSx SINE Alu 0 309 1 259 77 0 0 chr10 26266588 26266627 -114050138 + L1MA3 LINE L1 6267 6305 0 1176 194 17 69 chr10 26266922 26267210 -114049555 - AluJo SINE Alu 0 312 40 360 0 0 0 chr10 26267782 26267822 -114048943 + (TG)n Simple_repeat Simple_repeat 2 41 0 1767 148 11 15 chr10 26267992 26268263 -114048502 + AluJo SINE Alu 19 288 -24 2079 131 0 0 chr10 26268274 26268584 -114048181 + AluSx SINE Alu 1 310 0 501 250 83 31 chr10 26271423 26271478 -114045287 - MIR SINE MIR -45 217 166 1924 126 47 0 chr10 26271478 26271756 -114045009 - AluJo SINE Alu -10 302 12 501 250 83 31 chr10 26271756 26271892 -114044873 - MIR SINE MIR -96 166 16 3218 131 10 12 chr10 26272059 26272548 -114044217 - LOR1a LTR ERV1 -7 490 3 296 158 0 73 chr10 26272971 26273282 -114043483 + (TA)n Simple_repeat Simple_repeat 1 288 0 260 317 49 37 chr10 26273590 26273754 -114043011 + MIR SINE MIR 97 262 0 2406 99 0 0 chr10 26274007 26274310 -114042455 + AluSq SINE Alu 1 303 -10 1841 168 7 0 chr10 26274611 26274903 -114041862 - AluJb SINE Alu -18 294 1 1936 163 3 0 chr10 26274931 26275232 -114041533 - AluJo SINE Alu -10 302 1 2194 105 0 3 chr10 26275789 26276084 -114040681 - AluSq SINE Alu -13 300 7 195 292 100 50 chr10 26276491 26276611 -114040154 + L3 LINE CR1 317 442 -1135 2067 117 0 11 chr10 26277023 26277306 -114039459 - AluSx SINE Alu -24 288 9 684 139 28 0 chr10 26277422 26277530 -114039235 - L1PA16 LINE L1 -9 6157 6047 341 297 132 62 chr10 26277740 26278080 -114038685 + L3b LINE CR1 1102 1465 -118 772 199 8 8 chr10 26278248 26278379 -114038386 + FLAM_A SINE Alu 1 131 -2 602 85 11 0 chr10 26278382 26278476 -114038289 + (GGAA)n Simple_repeat Simple_repeat 2 96 0 243 253 162 40 chr10 26278651 26278750 -114038015 + L2 LINE L2 3160 3270 -2 1551 194 95 14 chr10 26278936 26279282 -114037483 + L1MB8 LINE L1 5657 6030 -148 1229 108 0 6 chr10 26279284 26279450 -114037315 - AluSg/x SINE Alu -15 297 133 432 245 38 0 chr10 26279450 26279574 -114037191 + L1MB7 LINE L1 6021 6149 -25 1620 167 14 21 chr10 26279574 26279907 -114036858 - AluJo SINE Alu 0 333 3 2065 102 3 7 chr10 26279956 26280240 -114036525 + AluSq SINE Alu 1 283 -30 2337 202 26 22 chr10 26280765 26281373 -114035392 + L1M3 LINE L1 4848 5457 -723 252 214 0 0 chr10 26281372 26281414 -114035351 - L1M4 LINE L1 -707 5467 5426 * 2261 110 3 3 chr10 26281595 26281905 -114034860 - AluSg SINE Alu 0 310 1 241 302 54 31 chr10 26282973 26283102 -114033663 + MIR SINE MIR 119 250 -12 348 348 81 5 chr10 26283520 26283741 -114033024 - MIR SINE MIR -14 248 11 2246 125 44 36 chr10 26284160 26284521 -114032244 + THE1B LTR MaLR 1 364 0 420 321 79 42 chr10 26285638 26285828 -114030937 + MIR3 SINE MIR 5 201 -7 25 51 0 0 chr10 26286296 26286335 -114030430 + AT_rich Low_complexity Low_complexity 1 39 0 317 336 64 39 chr10 26286401 26286615 -114030150 - L1MC4a LINE L1 -1766 6042 5818 2360 89 7 0 chr10 26286615 26286918 -114029847 - AluSx SINE Alu -7 305 1 317 336 64 39 chr10 26286918 26286986 -114029779 - L1MC4a LINE L1 -1990 5818 5753 269 266 149 39 chr10 26287064 26287433 -114029332 - L1MC4a LINE L1 -725 5441 5296 282 323 52 47 chr10 26287530 26287954 -114028811 - L1MC4a LINE L1 -979 5167 4742 22 70 0 0 chr10 26288135 26288178 -114028587 + AT_rich Low_complexity Low_complexity 1 43 0 2539 114 22 75 chr10 26289759 26290143 -114026622 - L1MB2 LINE L1 0 6171 5813 2229 64 0 30 chr10 26290143 26290439 -114026326 + AluY SINE Alu 1 287 -24 2539 114 22 75 chr10 26290439 26290509 -114026256 - L1MB2 LINE L1 -358 5813 5741 2106 123 7 3 chr10 26290530 26290832 -114025933 - AluSx SINE Alu -9 303 1 21 0 0 0 chr10 26291543 26291564 -114025201 + AT_rich Low_complexity Low_complexity 1 21 0 898 143 7 0 chr10 26291738 26291885 -114024880 - L1MA9 LINE L1 -5 6307 6160 1872 122 68 0 chr10 26292036 26292314 -114024451 + AluSx SINE Alu 1 297 -15 1404 174 80 31 chr10 26292826 26293113 -114023652 + AluJb SINE Alu 1 301 -11 245 239 204 44 chr10 26293365 26293478 -114023287 - MIR SINE MIR -13 249 119 2058 132 3 7 chr10 26294906 26295209 -114021556 - AluSx SINE Alu -10 302 1 195 42 0 0 chr10 26297381 26297405 -114019360 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 4124 152 142 14 chr10 26298199 26298931 -114017834 - LTR1B LTR ERV1 0 826 1 1685 203 56 17 chr10 26299249 26299609 -114017156 - MLT1A2 LTR MaLR 0 374 1 2428 91 0 0 chr10 26299698 26300006 -114016759 - AluSg SINE Alu 0 310 3 258 223 17 189 chr10 26300175 26300350 -114016415 - MIR SINE MIR -90 172 28 2059 151 74 26 chr10 26300470 26300848 -114015917 + MSTD LTR MaLR 1 396 0 358 226 137 24 chr10 26300897 26301021 -114015744 - MIR3 SINE MIR -49 159 22 259 210 14 168 chr10 26302738 26302881 -114013884 + MARNA DNA Mariner 440 560 -26 204 125 0 0 chr10 26303003 26303035 -114013730 + (TTTTC)n Simple_repeat Simple_repeat 3 34 0 2104 143 0 9 chr10 26303037 26303352 -114013413 - AluSx SINE Alu 0 312 1 399 335 71 27 chr10 26303405 26303629 -114013136 - MIR SINE MIR -26 236 3 2159 100 0 4 chr10 26304000 26304280 -114012485 - AluSx SINE Alu -6 306 28 296 253 103 34 chr10 26304943 26305089 -114011676 - L1ME4a LINE L1 -11 6110 5955 1845 167 0 16 chr10 26305129 26305446 -114011319 - AluJb SINE Alu 0 312 1 2386 66 0 25 chr10 26305652 26305971 -114010794 + AluY SINE Alu 1 311 0 308 329 60 7 chr10 26306078 26306227 -114010538 - MIR SINE MIR -8 254 98 603 110 8 31 chr10 26306672 26306918 -114009847 + AluSx SINE Alu 1 310 0 1802 178 0 22 chr10 26307511 26307825 -114008940 - AluJo SINE Alu -5 307 1 2389 90 0 0 chr10 26307934 26308233 -114008532 - AluSq SINE Alu -14 299 1 215 222 0 19 chr10 26308694 26308729 -114008036 + CT-rich Low_complexity Low_complexity 3 38 -17 1503 169 0 55 chr10 26308729 26309055 -114007710 - AluJo SINE Alu 0 312 5 215 222 0 19 chr10 26309055 26309073 -114007692 + CT-rich Low_complexity Low_complexity 38 55 0 183 42 0 0 chr10 26309650 26309674 -114007091 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2149 136 0 0 chr10 26310116 26310426 -114006339 + AluSx SINE Alu 1 310 -2 204 237 0 51 chr10 26311004 26311063 -114005702 + T-rich Low_complexity Low_complexity 4 59 0 1010 176 71 9 chr10 26311672 26311882 -114004883 - MIR SINE MIR -3 259 37 185 333 96 0 chr10 26312876 26312975 -114003790 - MIR SINE MIR -64 144 62 351 0 0 0 chr10 26313133 26313172 -114003593 + (TG)n Simple_repeat Simple_repeat 2 40 0 2589 53 0 0 chr10 26313937 26314239 -114002526 + AluY SINE Alu 1 302 -9 873 172 53 24 chr10 26314551 26314720 -114002045 - AluJb SINE Alu -138 174 1 1787 116 31 41 chr10 26315768 26315946 -114000819 + L1PA16 LINE L1 5867 6042 -124 2252 158 83 25 chr10 26315946 26316382 -114000383 - LOR1b LTR ERV1 0 461 1 1787 116 31 41 chr10 26316382 26316497 -114000268 + L1PA16 LINE L1 6042 6157 -9 1701 173 7 7 chr10 26318621 26318928 -113997837 - AluJo SINE Alu -5 307 1 321 318 117 7 chr10 26320154 26320308 -113996457 - MIR3 SINE MIR -6 202 32 1797 149 22 4 chr10 26320323 26320598 -113996167 + AluJo SINE Alu 1 280 -32 210 37 0 0 chr10 26320598 26320625 -113996140 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 2073 146 0 3 chr10 26323611 26323919 -113992846 + AluSq SINE Alu 1 307 -6 1508 151 0 59 chr10 26324186 26324457 -113992308 + AluSx SINE Alu 1 255 -57 360 0 0 0 chr10 26324457 26324497 -113992268 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 2180 156 24 15 chr10 26325197 26325531 -113991234 + MER1B DNA MER1_type 1 337 0 22 70 0 0 chr10 26326292 26326335 -113990430 + AT_rich Low_complexity Low_complexity 1 43 0 192 270 79 16 chr10 26326464 26326527 -113990238 - MIR SINE MIR -108 100 34 1224 156 14 14 chr10 26326678 26326889 -113989876 - AluJb SINE Alu 0 312 102 1302 188 7 33 chr10 26376894 26377166 -113939599 - AluJo SINE Alu -36 276 12 896 169 0 0 chr10 26377725 26377861 -113938904 + MER2 DNA MER2_type 1 136 -209 550 227 74 51 chr10 26377902 26378118 -113938647 + MER2 DNA MER2_type 125 345 0 2128 111 3 0 chr10 26378347 26378636 -113938129 - AluSx SINE Alu -13 299 10 1690 167 10 7 chr10 26379168 26379461 -113937304 + AluJo SINE Alu 6 299 -13 1532 169 52 14 chr10 26379461 26379581 -113937184 + AluJb SINE Alu 1 115 -197 186 43 0 0 chr10 26379581 26379604 -113937161 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 1532 169 52 14 chr10 26379604 26379773 -113936992 + AluJb SINE Alu 115 301 -11 521 238 210 5 chr10 26380049 26380263 -113936502 - MIR SINE MIR 0 262 5 2695 108 11 6 chr10 26381015 26381377 -113935388 - THE1B LTR MaLR 0 364 1 22 0 0 0 chr10 26381402 26381424 -113935341 + AT_rich Low_complexity Low_complexity 1 22 0 2404 101 0 3 chr10 26383150 26383456 -113933309 + AluSq SINE Alu 1 305 -8 193 284 62 12 chr10 26383795 26383876 -113932889 - L2 LINE L2 -359 2913 2829 1984 125 0 7 chr10 26384047 26384360 -113932405 + AluSx SINE Alu 3 313 0 342 175 164 129 chr10 26384360 26384531 -113932234 - MER5B DNA MER1_type -1 177 1 2425 85 0 3 chr10 26385846 26386152 -113930613 + AluSq SINE Alu 1 305 -8 373 160 4 4 chr10 26386575 26386650 -113930115 - Alu SINE Alu -250 53 1 768 296 149 13 chr10 26386670 26387191 -113929574 + L2 LINE L2 2716 3312 -1 2281 122 0 0 chr10 26388269 26388573 -113928192 - AluSq SINE Alu -9 304 1 1214 276 18 38 chr10 26389651 26390046 -113926719 - MER115 DNA AcHobo -25 668 282 1481 164 19 58 chr10 26391106 26391418 -113925347 - AluJo SINE Alu -12 300 1 2172 103 26 10 chr10 26392054 26392356 -113924409 + AluSx SINE Alu 2 308 -4 621 208 75 31 chr10 26392630 26392789 -113923976 + MIR SINE MIR 92 257 -5 708 302 100 33 chr10 26392956 26394120 -113922645 - L1ME3A LINE L1 -206 5964 4685 243 0 0 0 chr10 26394142 26394169 -113922596 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1925 157 0 3 chr10 26394171 26394458 -113922307 - AluSx SINE Alu -26 286 1 492 328 153 16 chr10 26394525 26395041 -113921724 - L1ME3A LINE L1 -1830 4316 3730 2938 90 6 8 chr10 26395072 26395437 -113921328 - THE1B LTR MaLR 0 364 1 2199 102 0 41 chr10 26396054 26396369 -113920396 - AluY SINE Alu -9 302 1 1864 157 28 0 chr10 26396442 26396604 -113920161 - AluSx SINE Alu -17 295 120 1954 100 0 4 chr10 26396604 26396864 -113919901 - AluSc SINE Alu -4 305 47 1864 157 28 0 chr10 26396864 26396988 -113919777 - AluSx SINE Alu -192 120 1 21 0 0 0 chr10 26397220 26397241 -113919524 + AT_rich Low_complexity Low_complexity 1 21 0 257 290 75 47 chr10 26397568 26397675 -113919090 + L2 LINE L2 3162 3271 -1 2385 88 3 0 chr10 26397748 26398053 -113918712 - AluSc SINE Alu -3 306 1 570 190 17 31 chr10 26398459 26398622 -113918143 + MER69 DNA AcHobo 9 2526 0 471 333 125 27 chr10 26398666 26399114 -113917651 - L1ME4a LINE L1 -223 5898 5407 2020 129 3 10 chr10 26399493 26399787 -113916978 + AluSx SINE Alu 1 292 -20 413 297 95 23 chr10 26400588 26400804 -113915961 + MIR SINE MIR 19 250 -12 415 211 0 11 chr10 26401784 26401874 -113914891 - L2 LINE L2 -1 3312 3224 839 117 102 22 chr10 26401890 26402027 -113914738 + FRAM SINE Alu 21 168 -8 259 324 33 56 chr10 26402027 26402240 -113914525 - L2 LINE L2 -94 3219 3012 1062 236 114 64 chr10 26402240 26402790 -113913975 - HAL1 LINE L1 -898 1609 1032 347 304 63 87 chr10 26402798 26403011 -113913754 - HAL1 LINE L1 -1575 932 728 1553 196 0 11 chr10 26403011 26403286 -113913479 + AluJb SINE Alu 1 272 -40 347 304 63 87 chr10 26403286 26403404 -113913361 - HAL1 LINE L1 -1779 728 609 3849 132 2 8 chr10 26403547 26404077 -113912688 - MER1A DNA MER1_type 0 527 1 334 264 100 36 chr10 26404236 26404376 -113912389 - HAL1 LINE L1 -2358 149 1 650 210 107 24 chr10 26404492 26404682 -113912083 - MLT1G1 LTR MaLR 0 595 332 254 183 0 33 chr10 26404858 26404918 -113911847 - MLT1G1 LTR MaLR -374 175 118 2347 100 20 0 chr10 26405269 26405568 -113911197 - AluSx SINE Alu -7 305 1 1762 186 3 0 chr10 26405615 26405905 -113910860 - AluJo SINE Alu -21 291 1 186 128 0 0 chr10 26406455 26406494 -113910271 + (T)n Simple_repeat Simple_repeat 1 39 0 368 306 52 52 chr10 26406690 26406863 -113909902 - MIR3 SINE MIR -16 192 20 240 35 0 0 chr10 26407148 26407177 -113909588 + (TC)n Simple_repeat Simple_repeat 2 30 0 2258 106 6 6 chr10 26407177 26407489 -113909276 - AluSx SINE Alu 0 312 1 1668 177 7 3 chr10 26407498 26407786 -113908979 - AluJo SINE Alu -23 289 1 266 326 11 11 chr10 26407949 26408044 -113908721 - MIR3 SINE MIR -50 158 64 2250 112 0 0 chr10 26409011 26409306 -113907459 - AluSx SINE Alu -17 295 1 2478 75 0 0 chr10 26409622 26409930 -113906835 + AluY SINE Alu 1 308 -3 255 61 0 0 chr10 26411052 26411085 -113905680 + (A)n Simple_repeat Simple_repeat 1 33 0 1724 215 66 35 chr10 26412625 26413113 -113903652 - MLT1D LTR MaLR -2 503 1 201 213 0 0 chr10 26415789 26415836 -113900929 + (TG)n Simple_repeat Simple_repeat 1 47 0 533 282 82 20 chr10 26416012 26416057 -113900708 - MIR SINE MIR -1 261 220 2044 132 31 0 chr10 26416057 26416345 -113900420 - AluSx SINE Alu -13 299 3 533 282 82 20 chr10 26416345 26416544 -113900221 - MIR SINE MIR -42 220 2 580 254 92 40 chr10 26416812 26417139 -113899626 + L1MC5 LINE L1 7581 7924 -37 2026 119 3 3 chr10 26417143 26417457 -113899308 - AluSx SINE Alu 0 314 1 201 444 41 0 chr10 26417487 26417656 -113899109 + L2 LINE L2 2999 3174 -98 408 276 122 13 chr10 26418232 26418388 -113898377 - MIR SINE MIR -38 224 52 8182 20 0 0 chr10 26418528 26419451 -113897314 - L1PA4 LINE L1 -3 6152 5230 222 37 0 0 chr10 26419544 26419571 -113897194 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 710 304 9 17 chr10 26419819 26420049 -113896716 - MIR SINE MIR -3 259 32 2047 50 35 15 chr10 26420352 26420647 -113896118 - L1PA5 LINE L1 0 6154 5890 2329 96 0 0 chr10 26420995 26421286 -113895479 + AluSc SINE Alu 1 291 -18 1752 173 6 6 chr10 26421520 26421832 -113894933 - AluJb SINE Alu 0 312 1 23 0 0 0 chr10 26423408 26423431 -113893334 + AT_rich Low_complexity Low_complexity 1 23 0 633 243 101 0 chr10 26423822 26423991 -113892774 - MIR SINE MIR -59 203 18 21 0 0 0 chr10 26424063 26424084 -113892681 + AT_rich Low_complexity Low_complexity 1 21 0 1683 97 10 59 chr10 26425491 26425537 -113891228 + L1MA2 LINE L1 6029 6076 -228 2418 58 7 29 chr10 26425537 26425845 -113890920 + AluY SINE Alu 1 301 -10 1683 97 10 59 chr10 26425845 26426088 -113890677 + L1MA2 LINE L1 6076 6304 0 310 317 30 64 chr10 26426121 26426323 -113890442 - MIR3 SINE MIR -6 202 8 26 0 0 0 chr10 26428458 26428484 -113888281 + AT_rich Low_complexity Low_complexity 1 26 0 1888 149 10 3 chr10 26429036 26429331 -113887434 - AluJb SINE Alu -15 297 1 2299 98 3 0 chr10 26429851 26430147 -113886618 - AluSx SINE Alu -15 297 1 22 0 0 0 chr10 26430157 26430179 -113886586 + AT_rich Low_complexity Low_complexity 1 22 0 288 169 0 133 chr10 26430473 26430490 -113886275 - AluJo SINE Alu 0 302 284 252 59 0 0 chr10 26430490 26430524 -113886241 + (TG)n Simple_repeat Simple_repeat 1 34 0 288 169 0 133 chr10 26430524 26430589 -113886176 - AluJo SINE Alu -18 284 231 1510 151 12 27 chr10 26430589 26430848 -113885917 - AluJo SINE Alu -57 255 1 397 262 48 0 chr10 26431746 26431872 -113884893 + MIR SINE MIR 80 211 -51 961 173 16 26 chr10 26432077 26432268 -113884497 + MER5A DNA MER1_type 1 189 0 195 200 0 0 chr10 26432700 26432740 -113884025 - L3 LINE CR1 -1 1576 1537 1611 202 0 34 chr10 26432786 26433108 -113883657 + AluJo SINE Alu 1 311 -1 235 0 0 54 chr10 26434474 26434511 -113882254 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 2043 131 0 3 chr10 26434519 26434802 -113881963 - AluSx SINE Alu -30 282 1 311 264 30 12 chr10 26435197 26435364 -113881401 + (TA)n Simple_repeat Simple_repeat 1 170 0 180 0 0 0 chr10 26436580 26436600 -113880165 + (TCTG)n Simple_repeat Simple_repeat 2 21 0 1746 160 4 7 chr10 26437640 26437921 -113878844 - AluJb SINE Alu -21 291 12 402 74 0 0 chr10 26440933 26440987 -113875778 + (TG)n Simple_repeat Simple_repeat 2 55 0 24 77 0 0 chr10 26442173 26442225 -113874540 + AT_rich Low_complexity Low_complexity 1 52 0 1789 148 7 11 chr10 26442254 26442567 -113874198 - AluSx SINE Alu 0 317 6 189 0 0 0 chr10 26442758 26442779 -113873986 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 2209 101 0 0 chr10 26442779 26443057 -113873708 - AluSx SINE Alu -32 280 3 316 164 0 49 chr10 26444673 26444734 -113872031 - Tigger2a DNA MER2_type 0 434 377 2384 97 0 13 chr10 26444749 26445059 -113871706 + AluSx SINE Alu 1 306 -6 912 164 6 40 chr10 26445169 26445346 -113871419 - Tigger2a DNA MER2_type -263 171 1 1873 189 59 66 chr10 26445711 26446199 -113870566 - MLT1D LTR MaLR 0 505 21 2274 120 0 0 chr10 26447990 26448290 -113868475 + AluSq SINE Alu 1 300 -13 333 159 19 9 chr10 26449856 26449963 -113866802 + (CA)n Simple_repeat Simple_repeat 1 108 0 922 241 27 27 chr10 26450267 26450528 -113866237 - MIR SINE MIR 0 262 2 952 157 26 92 chr10 26452569 26452651 -113864114 - MER20 DNA MER1_type 0 219 133 2871 143 13 4 chr10 26452651 26453104 -113863661 - MSTB2 LTR MaLR 0 457 1 952 157 26 92 chr10 26453104 26453250 -113863515 - MER20 DNA MER1_type -86 133 6 636 250 0 7 chr10 26453489 26453637 -113863128 + MIR SINE MIR 26 172 -90 1925 154 13 13 chr10 26455792 26456091 -113860674 + AluJo SINE Alu 3 301 -11 469 298 19 0 chr10 26456306 26456514 -113860251 + L2 LINE L2 2545 2756 -558 189 0 0 0 chr10 26457156 26457177 -113859588 + (TTTTTA)n Simple_repeat Simple_repeat 5 25 0 * 600 153 0 0 chr10 26457176 26457294 -113859471 + (TA)n Simple_repeat Simple_repeat 1 118 0 2333 79 16 16 chr10 26457294 26457599 -113859166 - AluSx SINE Alu -7 305 1 895 157 13 26 chr10 26457625 26457778 -113858987 - FRAM SINE Alu -15 151 1 21 0 0 0 chr10 26458142 26458163 -113858602 + AT_rich Low_complexity Low_complexity 1 21 0 402 278 87 10 chr10 26458430 26458718 -113858047 + L2 LINE L2 2911 3313 0 189 275 25 38 chr10 26458826 26458906 -113857859 - MIR SINE MIR -87 175 97 908 283 102 20 chr10 26458922 26459382 -113857383 + L2 LINE L2 2304 2801 -513 330 284 0 71 chr10 26459397 26459524 -113857241 - MER94 DNA DNA -15 119 2 1169 266 64 39 chr10 26459542 26460026 -113856739 + L2 LINE L2 2815 3310 -3 304 232 14 0 chr10 26461988 26462057 -113854708 + L2 LINE L2 3238 3307 -6 543 122 12 12 chr10 26462224 26462306 -113854459 + AluJ/FRAM SINE Alu 214 295 -17 1919 141 37 7 chr10 26462640 26462938 -113853827 + AluJb SINE Alu 1 307 -5 2515 93 0 0 chr10 26464476 26464788 -113851977 - AluSx SINE Alu 0 312 1 2269 96 7 0 chr10 26466051 26466344 -113850421 - AluSx SINE Alu -17 295 1 338 200 0 0 chr10 26466967 26467037 -113849728 - AluS SINE Alu -3 298 229 1044 66 0 0 chr10 26467037 26467158 -113849607 - AluSq/x SINE Alu -192 121 1 186 133 0 0 chr10 26468593 26468623 -113848142 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 313 294 17 17 chr10 26469778 26469897 -113846868 - MIR SINE MIR -30 232 114 193 273 0 61 chr10 26470351 26470417 -113846348 - MIR SINE MIR -111 151 90 400 240 47 16 chr10 26470517 26470646 -113846119 - MIR SINE MIR -63 199 67 1778 175 45 0 chr10 26470649 26470935 -113845830 + AluJb SINE Alu 1 299 -13 1240 99 6 11 chr10 26471000 26471181 -113845584 + L1PB3 LINE L1 5968 6147 -7 1554 160 53 11 chr10 26471739 26472021 -113844744 + AluJb SINE Alu 1 294 -18 364 279 121 46 chr10 26472347 26472627 -113844138 - MARNA DNA Mariner -13 573 273 2301 109 3 6 chr10 26472649 26472962 -113843803 + AluSx SINE Alu 1 312 0 306 0 0 0 chr10 26473383 26473417 -113843348 + (TG)n Simple_repeat Simple_repeat 2 35 0 195 42 0 0 chr10 26473456 26473480 -113843285 + (TG)n Simple_repeat Simple_repeat 2 25 0 186 133 0 0 chr10 26473519 26473549 -113843216 + (TG)n Simple_repeat Simple_repeat 2 31 0 267 31 0 0 chr10 26473588 26473620 -113843145 + (TG)n Simple_repeat Simple_repeat 2 33 0 794 147 8 0 chr10 26473999 26474128 -113842637 + FLAM_C SINE Alu 1 130 -3 180 163 0 0 chr10 26474262 26474305 -113842460 + A-rich Low_complexity Low_complexity 1 43 0 2691 39 0 3 chr10 26474935 26475247 -113841518 - AluY SINE Alu 0 311 1 225 65 0 0 chr10 26475439 26475470 -113841295 + (T)n Simple_repeat Simple_repeat 1 31 0 203 263 0 92 chr10 26475815 26475891 -113840874 - L2 LINE L2 -53 3219 3151 1767 168 17 0 chr10 26475909 26476201 -113840564 + AluSg SINE Alu 1 297 -13 458 345 26 9 chr10 26476736 26476968 -113839797 - Charlie8 DNA MER1_type -2172 245 10 353 321 36 21 chr10 26478157 26478297 -113838468 - MER5B DNA MER1_type -1 177 36 2369 298 104 25 chr10 26479753 26481181 -113835584 + L1MEc LINE L1 45 1586 -4810 2278 240 78 6 chr10 26481179 26481863 -113834902 + L1M4 LINE L1 3589 4321 -1825 * 294 169 26 52 chr10 26481867 26481944 -113834821 + L1ME LINE L1 5770 5844 -322 252 235 153 31 chr10 26482476 26482496 -113834269 - L2 LINE L2 0 3313 3297 2592 108 19 100 chr10 26482496 26482968 -113833797 - Tigger2a DNA MER2_type 0 434 1 252 235 153 31 chr10 26482968 26483045 -113833720 - L2 LINE L2 -16 3297 3204 312 250 20 20 chr10 26483080 26483180 -113833585 + MIR SINE MIR 36 135 -73 429 259 18 0 chr10 26483384 26483496 -113833269 + MER5B DNA MER1_type 10 123 -55 192 258 97 21 chr10 26483902 26483995 -113832770 - L2 LINE L2 -294 3019 2920 689 87 0 0 chr10 26483998 26484090 -113832675 + AluSg/x SINE Alu 210 301 -9 1329 143 14 21 chr10 26484370 26484606 -113832159 + L1M3 LINE L1 5441 5664 -519 1943 105 0 25 chr10 26484637 26484913 -113831852 + AluY SINE Alu 37 305 -6 517 286 102 0 chr10 26485130 26485326 -113831439 - MIR SINE MIR -45 217 2 291 318 0 23 chr10 26486065 26486194 -113830571 - MIR SINE MIR -116 146 21 922 143 0 0 chr10 26486911 26487044 -113829721 + FLAM_A SINE Alu 1 133 0 2544 70 3 3 chr10 26487949 26488262 -113828503 + AluSp SINE Alu 1 313 0 32 86 0 0 chr10 26488844 26488925 -113827840 + AT_rich Low_complexity Low_complexity 1 81 0 2234 107 0 3 chr10 26488925 26489215 -113827550 - AluSx SINE Alu -23 289 1 1832 188 3 0 chr10 26489637 26489945 -113826820 + AluJo SINE Alu 1 309 -3 327 270 104 26 chr10 26490292 26490407 -113826358 + MER5A DNA MER1_type 66 189 0 1582 145 35 75 chr10 26490725 26491043 -113825722 + AluJb SINE Alu 1 305 -7 734 192 45 0 chr10 26491171 26491327 -113825438 + L1MA4 LINE L1 6127 6289 -11 201 121 0 0 chr10 26491420 26491453 -113825312 + (TTC)n Simple_repeat Simple_repeat 1 33 0 2132 128 7 0 chr10 26491560 26491857 -113824908 + AluSx SINE Alu 1 299 -13 854 171 40 92 chr10 26493314 26493542 -113823223 + MER20 DNA MER1_type 1 216 -3 276 100 0 0 chr10 26493589 26493629 -113823136 + (TC)n Simple_repeat Simple_repeat 1 40 0 427 276 8 16 chr10 26494176 26494303 -113822462 - L2 LINE L2 0 3313 3188 605 92 0 31 chr10 26494401 26494499 -113822266 + FLAM_C SINE Alu 48 142 -1 225 0 0 0 chr10 26494499 26494524 -113822241 + (TA)n Simple_repeat Simple_repeat 2 26 0 1062 162 15 41 chr10 26494531 26494728 -113822037 + AluJb SINE Alu 118 309 -3 24 0 0 0 chr10 26494728 26494752 -113822013 + AT_rich Low_complexity Low_complexity 1 24 0 1700 125 0 106 chr10 26494759 26494911 -113821854 + AluJo SINE Alu 3 107 -205 2007 120 57 0 chr10 26494911 26495194 -113821571 + AluSx SINE Alu 1 299 -13 1700 125 0 106 chr10 26495194 26495352 -113821413 + AluJo SINE Alu 107 280 -32 714 152 0 32 chr10 26496057 26496182 -113820583 + FRAM SINE Alu 33 153 -23 1504 138 89 0 chr10 26496562 26496809 -113819956 + AluSx SINE Alu 1 269 -43 1435 154 6 115 chr10 26496855 26497185 -113819580 + AluJo SINE Alu 3 296 -6 212 167 0 0 chr10 26497470 26497506 -113819259 + (CAT)n Simple_repeat Simple_repeat 3 38 0 715 180 21 142 chr10 26498871 26499110 -113817655 + MER63A DNA MER1_type 1 210 0 1780 152 7 14 chr10 26499554 26499843 -113816922 + AluJb SINE Alu 1 287 -25 761 132 0 0 chr10 26500462 26500568 -113816197 + FLAM_C SINE Alu 2 107 -36 545 161 31 0 chr10 26500590 26500720 -113816045 + GA-rich Low_complexity Low_complexity 1 134 0 2328 105 0 0 chr10 26500791 26501097 -113815668 - AluSg1 SINE Alu -3 306 1 216 0 0 0 chr10 26501283 26501307 -113815458 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 2076 100 4 7 chr10 26501310 26501589 -113815176 - AluSx SINE Alu -28 284 7 2328 104 0 0 chr10 26502296 26502593 -113814172 - AluSg SINE Alu -13 297 1 1931 156 0 10 chr10 26502841 26503130 -113813635 - AluSx SINE Alu -26 286 1 716 139 0 16 chr10 26503132 26503254 -113813511 - FLAM_A SINE Alu -2 140 21 411 309 44 12 chr10 26504244 26504411 -113812354 - MIR3 SINE MIR -24 184 13 214 238 0 0 chr10 26505759 26505801 -113810964 + GA-rich Low_complexity Low_complexity 1 42 0 204 170 19 38 chr10 26508215 26508268 -113808497 + CT-rich Low_complexity Low_complexity 2 53 0 260 169 0 17 chr10 26509081 26509140 -113807625 + CT-rich Low_complexity Low_complexity 3 60 0 2014 135 0 35 chr10 26510004 26510316 -113806449 + AluJb SINE Alu 1 301 -11 2923 176 29 41 chr10 26511000 26511061 -113805704 - MER73 LTR ERVL 0 644 584 2361 77 0 0 chr10 26511061 26511348 -113805417 - AluY SINE Alu -24 287 1 2923 176 29 41 chr10 26511348 26511938 -113804827 - MER73 LTR ERVL -60 584 1 913 183 0 24 chr10 26512059 26512223 -113804542 - FRAM SINE Alu -17 159 1 332 311 172 0 chr10 26512386 26512537 -113804228 + MIR SINE MIR 68 244 -18 2144 119 3 3 chr10 26512548 26512843 -113803922 + AluSx SINE Alu 1 295 -17 256 213 93 73 chr10 26513935 26514085 -113802680 - MIR SINE MIR -3 259 107 1175 255 109 39 chr10 26514976 26515407 -113801358 - MER20B DNA MER1_type -322 461 1 2017 146 0 7 chr10 26515662 26515964 -113800801 + AluSx SINE Alu 1 300 -12 553 249 18 12 chr10 26516261 26516430 -113800335 - MER5B DNA MER1_type -6 172 3 2265 134 91 10 chr10 26517892 26518287 -113798478 - MSTA LTR MaLR 0 428 2 651 144 29 83 chr10 26519438 26519472 -113797293 + L1MA5A LINE L1 6112 6146 -154 2283 99 0 0 chr10 26519472 26519765 -113797000 - AluSg SINE Alu -17 293 1 651 144 29 83 chr10 26519765 26519904 -113796861 + L1MA5A LINE L1 6146 6273 -27 333 152 0 54 chr10 26519961 26520073 -113796692 + (TA)n Simple_repeat Simple_repeat 1 106 0 228 239 0 43 chr10 26520086 26520178 -113796587 + (TA)n Simple_repeat Simple_repeat 2 89 0 312 155 0 36 chr10 26520291 26520375 -113796390 + (TA)n Simple_repeat Simple_repeat 1 81 0 332 43 0 21 chr10 26520716 26520763 -113796002 + (TA)n Simple_repeat Simple_repeat 2 47 0 263 154 58 0 chr10 26520763 26520815 -113795950 + L1MA5A LINE L1 6237 6291 -6 1508 154 47 8 chr10 26521275 26521528 -113795237 + AluJo SINE Alu 33 295 -17 389 331 51 44 chr10 26521648 26521923 -113794842 - L3 LINE CR1 -529 1048 772 1719 149 52 21 chr10 26522120 26522408 -113794357 - AluJo SINE Alu -5 307 11 647 236 71 57 chr10 26522662 26522874 -113793891 + MER20 DNA MER1_type 5 219 0 213 296 19 0 chr10 26523130 26523184 -113793581 + polypyrimidine Low_complexity Low_complexity 4 58 0 23 0 0 0 chr10 26523949 26523972 -113792793 + AT_rich Low_complexity Low_complexity 1 23 0 1747 150 44 49 chr10 26524098 26524465 -113792300 + MLT1A1 LTR MaLR 1 365 0 1214 258 115 29 chr10 26524557 26525220 -113791545 - L1ME3A LINE L1 -8 6162 5406 924 229 110 27 chr10 26525234 26525538 -113791227 - MLT1E LTR MaLR -3 590 316 2663 238 52 32 chr10 26525708 26526624 -113790141 - L1ME1 LINE L1 -8 6158 5262 2170 139 0 0 chr10 26526624 26526927 -113789838 - AluSx SINE Alu -8 304 2 2663 238 52 32 chr10 26526927 26527724 -113789041 - L1ME1 LINE L1 -904 5262 4482 2401 94 3 0 chr10 26527724 26528031 -113788734 + AluSx SINE Alu 1 308 -4 2663 238 52 32 chr10 26528031 26528935 -113787830 - L1ME1 LINE L1 -1684 4482 3432 2128 140 0 0 chr10 26528935 26529242 -113787523 - AluSx SINE Alu -5 307 1 2663 238 52 32 chr10 26529242 26529425 -113787340 - L1ME1 LINE L1 -2734 3432 3254 771 229 76 28 chr10 26529491 26529779 -113786986 - L1M4 LINE L1 -2189 3957 3656 487 213 0 57 chr10 26529901 26530042 -113786723 - L1 LINE L1 -2168 3978 3846 710 237 73 20 chr10 26530075 26530320 -113786445 + MIR SINE MIR 2 259 -3 307 282 100 9 chr10 26530366 26530476 -113786289 + MER115 DNA AcHobo 2 121 -572 460 318 45 6 chr10 26530581 26530757 -113786008 + MER115 DNA AcHobo 162 344 -349 989 280 92 45 chr10 26530861 26531439 -113785326 + L2 LINE L2 2682 3313 0 1232 221 45 26 chr10 26531692 26532008 -113784757 + L1ME1 LINE L1 5818 6139 -45 2716 91 16 67 chr10 26532008 26532394 -113784371 - L1PB1 LINE L1 -1 6150 5787 2438 97 3 0 chr10 26532394 26532705 -113784060 - AluSx SINE Alu 0 312 1 2716 91 16 67 chr10 26532705 26532748 -113784017 - L1PB1 LINE L1 -364 5787 5743 1232 221 45 26 chr10 26532748 26532795 -113783970 + L1ME1 LINE L1 6139 6184 0 197 289 122 0 chr10 26532795 26532885 -113783880 - MIR SINE MIR -92 116 16 201 133 0 0 chr10 26534005 26534035 -113782730 + (TG)n Simple_repeat Simple_repeat 2 31 0 1804 274 124 24 chr10 26534734 26535556 -113781209 + L2 LINE L2 1715 2618 -696 1451 195 0 45 chr10 26536073 26536360 -113780405 + AluJo SINE Alu 1 274 -38 345 140 0 0 chr10 26536365 26536422 -113780343 + (CA)n Simple_repeat Simple_repeat 1 57 0 312 256 0 35 chr10 26536564 26536650 -113780115 - MIR SINE MIR -66 142 60 300 27 0 0 chr10 26537259 26537296 -113779469 + (TG)n Simple_repeat Simple_repeat 1 37 0 281 282 53 30 chr10 26537828 26537959 -113778806 + MIR SINE MIR 16 149 -113 4457 206 48 46 chr10 26538365 26539086 -113777679 - L1MD2 LINE L1 -16 6326 5608 2296 114 0 0 chr10 26539086 26539393 -113777372 - AluSg SINE Alu -3 307 1 4457 206 48 46 chr10 26539393 26539424 -113777341 - L1MD2 LINE L1 -734 5608 5579 1711 162 7 16 chr10 26539424 26539727 -113777038 + AluJb SINE Alu 5 304 -8 4457 206 48 46 chr10 26539727 26540141 -113776624 - L1MD2 LINE L1 -763 5579 5150 2189 116 0 0 chr10 26540141 26540433 -113776332 + AluSq SINE Alu 1 292 -21 4457 206 48 46 chr10 26540433 26540728 -113776037 - L1MD2 LINE L1 -1192 5150 4857 753 99 40 0 chr10 26540728 26540829 -113775936 - AluSq/x SINE Alu -206 107 3 540 161 21 0 chr10 26540843 26540936 -113775829 + L1M4 LINE L1 5189 5283 -863 3628 230 67 29 chr10 26540939 26541141 -113775624 - L1MD2 LINE L1 -1280 4849 4656 2491 70 0 10 chr10 26541141 26541455 -113775310 - AluY SINE Alu 0 311 1 3628 230 67 29 chr10 26541455 26542350 -113774415 - L1MD2 LINE L1 -1473 4656 3711 490 280 87 32 chr10 26542344 26542475 -113774290 - L1MD2 LINE L1 -853 1637 1515 * 180 0 0 0 chr10 26542475 26542495 -113774270 + (TA)n Simple_repeat Simple_repeat 2 21 0 490 280 87 32 chr10 26542495 26542680 -113774085 - L1MD2 LINE L1 -975 1515 1342 348 24 0 0 chr10 26542680 26542721 -113774044 + (TG)n Simple_repeat Simple_repeat 2 42 0 490 280 87 32 chr10 26542721 26542981 -113773784 - L1MD2 LINE L1 -1148 1342 984 809 227 91 12 chr10 26543152 26543394 -113773371 + MLT1I LTR MaLR 149 409 0 26 30 0 0 chr10 26543802 26543835 -113772930 + AT_rich Low_complexity Low_complexity 1 33 0 217 302 0 0 chr10 26544481 26544544 -113772221 - MIR SINE MIR -13 249 187 2542 152 25 23 chr10 26544559 26544608 -113772157 + Tigger2a DNA MER2_type 1 48 -2660 3595 202 79 4 chr10 26544608 26545291 -113771474 + MER50 LTR ERV1 1 734 0 2542 152 25 23 chr10 26545291 26545674 -113771091 + Tigger2a DNA MER2_type 48 434 0 219 216 307 0 chr10 26545675 26545763 -113771002 - MIR SINE MIR -90 172 58 198 300 20 0 chr10 26546227 26546277 -113770488 + MIR SINE MIR 211 261 -1 2026 100 82 4 chr10 26546320 26546599 -113770166 + AluSg SINE Alu 1 301 -9 1271 241 103 28 chr10 26546671 26547316 -113769449 + L2 LINE L2 2527 3235 -78 2347 101 0 0 chr10 26547345 26547653 -113769112 - AluSx SINE Alu -4 308 1 1282 178 38 48 chr10 26547734 26548026 -113768739 + AluJo SINE Alu 1 289 -23 784 190 110 0 chr10 26548651 26548814 -113767951 + MER5A DNA MER1_type 9 189 0 1891 179 81 27 chr10 26549807 26550176 -113766589 - MLT1B LTR MaLR -1 389 1 21 0 0 0 chr10 26550752 26550773 -113765992 + AT_rich Low_complexity Low_complexity 1 21 0 2242 127 3 6 chr10 26552063 26552377 -113764388 + AluSq SINE Alu 1 313 0 217 274 0 0 chr10 26553107 26553158 -113763607 + CT-rich Low_complexity Low_complexity 2 52 0 594 75 0 0 chr10 26553176 26553256 -113763509 + (TTCC)n Simple_repeat Simple_repeat 1 80 0 219 36 0 0 chr10 26553868 26553896 -113762869 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 14410 54 4 3 chr10 26554145 26556634 -113760131 - L1PA5 LINE L1 -1 6153 3658 1703 167 7 24 chr10 26556829 26557144 -113759621 + AluJo SINE Alu 1 310 0 205 287 30 20 chr10 26557402 26557503 -113759262 - L3b LINE CR1 -175 1408 1307 204 371 0 0 chr10 26557938 26558008 -113758757 + L3b LINE CR1 1296 1365 -218 601 193 25 144 chr10 26558754 26558874 -113757891 + MER96B DNA MER1_type? 3 136 -281 2015 82 4 11 chr10 26558874 26559143 -113757622 + AluY SINE Alu 5 271 -40 601 193 25 144 chr10 26559143 26559171 -113757594 + MER96B DNA MER1_type? 136 124 -293 1440 179 0 12 chr10 26559171 26559411 -113757354 + L1MC1 LINE L1 6086 6322 -11 601 193 25 144 chr10 26559411 26559463 -113757302 + MER96B DNA MER1_type? 123 180 -237 484 206 0 0 chr10 26560560 26560633 -113756132 + AluJ/FLAM SINE Alu 2 74 -238 343 267 0 0 chr10 26612378 26612453 -113704312 - MIR SINE MIR -185 77 3 1723 120 39 25 chr10 26612454 26612766 -113703999 + AluJo SINE Alu 1 316 0 1488 167 26 34 chr10 26613119 26613388 -113703377 + AluJo SINE Alu 1 267 -45 1148 119 0 0 chr10 26613435 26613586 -113703179 + AluSq/x SINE Alu 1 151 -161 1455 161 66 49 chr10 26613839 26614144 -113702621 - AluJb SINE Alu -2 310 1 2287 105 0 3 chr10 26615090 26615386 -113701379 - AluSx SINE Alu -15 297 3 207 0 0 0 chr10 26615778 26615801 -113700964 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 1598 126 114 11 chr10 26616241 26616512 -113700253 + AluSg SINE Alu 1 299 -11 27 29 0 0 chr10 26617363 26617397 -113699368 + AT_rich Low_complexity Low_complexity 1 34 0 829 138 29 36 chr10 26617922 26618060 -113698705 + FLAM_C SINE Alu 1 137 -6 347 282 74 20 chr10 26618108 26618257 -113698508 + HAL1b LINE L1 58 214 -1134 393 253 99 50 chr10 26618318 26618500 -113698265 + MLT1J LTR MaLR 71 261 -250 468 176 0 0 chr10 26618504 26618589 -113698176 + MER53 DNA DNA 1 85 -104 295 202 10 71 chr10 26618520 26618619 -113698146 - MER53 DNA DNA -7 182 90 * 183 80 0 0 chr10 26618620 26618645 -113698120 + (A)n Simple_repeat Simple_repeat 1 25 0 825 178 14 7 chr10 26618704 26618850 -113697915 + AluJo SINE Alu 5 151 -161 519 213 0 0 chr10 26618859 26618953 -113697812 - AluJ/FLAM SINE Alu -217 95 2 996 231 42 5 chr10 26619085 26619301 -113697464 - MER58A DNA MER1_type 0 224 1 2182 114 3 7 chr10 26619334 26619633 -113697132 - AluSq SINE Alu -15 298 1 25 0 0 0 chr10 26619708 26619733 -113697032 + AT_rich Low_complexity Low_complexity 1 25 0 804 176 0 0 chr10 26619735 26619860 -113696905 - FLAM_C SINE Alu -18 125 1 225 282 77 0 chr10 26619969 26620047 -113696718 - MLT1J LTR MaLR -52 459 376 322 133 0 167 chr10 26620110 26620152 -113696613 - MER53 DNA DNA 0 189 167 1946 112 0 76 chr10 26620152 26620478 -113696287 - AluSg SINE Alu 0 303 1 322 133 0 167 chr10 26620478 26620524 -113696241 - MER53 DNA DNA -22 167 115 1292 152 0 27 chr10 26620525 26620749 -113696016 - AluJo SINE Alu -11 301 84 216 0 0 0 chr10 26620867 26620891 -113695874 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2264 68 0 7 chr10 26620893 26621172 -113695593 - AluSg1 SINE Alu -32 277 1 302 261 42 2 chr10 26621202 26621335 -113695430 + L1P5 LINE L1 5306 5442 -712 1773 92 0 9 chr10 26621550 26621779 -113694986 + AluSg/x SINE Alu 65 291 -21 1123 273 64 8 chr10 26621877 26622265 -113694500 + L2 LINE L2 2389 2798 -516 650 219 89 113 chr10 26622360 26622730 -113694035 + L2 LINE L2 2936 3296 -17 681 266 0 0 chr10 26622744 26622902 -113693863 + FRAM SINE Alu 4 161 -5 328 123 15 15 chr10 26622906 26622971 -113693794 + A-rich Low_complexity Low_complexity 4 68 0 227 180 0 80 chr10 26623104 26623154 -113693611 + Alu SINE Alu 123 168 -135 460 139 0 14 chr10 26623154 26623226 -113693539 + AluJ/FLAM SINE Alu 15 85 -227 1764 144 118 9 chr10 26623550 26623898 -113692867 + LOR1b LTR ERV1 1 386 -75 2280 93 7 0 chr10 26623911 26624200 -113692565 + AluSc SINE Alu 1 291 -18 24 32 0 0 chr10 26624261 26624292 -113692473 + AT_rich Low_complexity Low_complexity 1 31 0 24 32 0 0 chr10 26624298 26624329 -113692436 + AT_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr10 26624340 26624368 -113692397 + AT_rich Low_complexity Low_complexity 1 28 0 232 259 23 23 chr10 26624378 26624509 -113692256 + (TTTA)n Simple_repeat Simple_repeat 3 133 0 2235 119 0 0 chr10 26624732 26625034 -113691731 - AluSq SINE Alu -11 302 1 234 0 0 0 chr10 26626146 26626172 -113690593 + (A)n Simple_repeat Simple_repeat 1 26 0 2190 99 3 3 chr10 26626460 26626754 -113690011 + AluSx SINE Alu 1 294 -18 2032 123 35 0 chr10 26627704 26627989 -113688776 - AluSx SINE Alu -17 295 1 1180 218 45 42 chr10 26628215 26628277 -113688488 + Charlie2 DNA MER1_type 2426 2486 -376 1585 185 3 54 chr10 26628277 26628590 -113688175 + AluJo SINE Alu 1 297 -15 1477 181 34 31 chr10 26628595 26628887 -113687878 + AluJo SINE Alu 3 295 -17 1180 218 45 42 chr10 26628887 26628995 -113687770 + Charlie2 DNA MER1_type 2489 2595 -267 2079 128 3 13 chr10 26628995 26629308 -113687457 - AluSx SINE Alu -2 310 1 1180 218 45 42 chr10 26629308 26629530 -113687235 + Charlie2 DNA MER1_type 2595 2826 -36 2594 67 0 3 chr10 26630026 26630362 -113686403 - AluY SINE Alu 0 335 1 297 0 0 0 chr10 26630494 26630527 -113686238 + (TG)n Simple_repeat Simple_repeat 2 34 0 1822 172 0 0 chr10 26630528 26630813 -113685952 - AluSx SINE Alu -27 285 1 474 226 88 13 chr10 26630976 26631135 -113685630 + L1ME LINE L1 5598 5768 -353 22 0 0 0 chr10 26631411 26631433 -113685332 + AT_rich Low_complexity Low_complexity 1 22 0 280 313 146 26 chr10 26631508 26631741 -113685024 - MIR SINE MIR 0 262 2 718 266 68 10 chr10 26632046 26632253 -113684512 + Charlie8 DNA MER1_type 2 220 -2197 1860 134 42 23 chr10 26632444 26632623 -113684142 - AluJb SINE Alu 0 312 123 2176 120 3 13 chr10 26632623 26632932 -113683833 - AluSx SINE Alu -4 308 3 1860 134 42 23 chr10 26632932 26633058 -113683707 - AluJb SINE Alu -189 123 1 593 302 117 32 chr10 26635501 26635971 -113680794 + L2 LINE L2 2245 2754 -560 209 336 164 0 chr10 26636215 26636337 -113680428 + L2 LINE L2 2085 2226 -1088 3226 160 34 24 chr10 26636442 26637030 -113679735 - L1PB4 LINE L1 -5 6151 5558 2343 180 9 32 chr10 26637033 26637463 -113679302 + L1 LINE L1 3256 3694 -2452 1710 187 3 7 chr10 26637463 26637762 -113679003 + AluJo SINE Alu 1 298 -14 2343 180 9 32 chr10 26637762 26637778 -113678987 + L1 LINE L1 3694 3709 -2437 225 0 0 0 chr10 26637778 26637803 -113678962 + (CAA)n Simple_repeat Simple_repeat 3 27 0 2343 180 9 32 chr10 26637803 26637883 -113678882 + L1 LINE L1 3709 3771 -2375 479 288 87 93 chr10 26638333 26638656 -113678109 + L2 LINE L2 2944 3264 -8 2174 118 0 0 chr10 26638826 26639123 -113677642 + AluSg SINE Alu 6 302 -8 303 234 0 0 chr10 26639124 26639201 -113677564 + GA-rich Low_complexity Low_complexity 1 77 0 420 185 111 85 chr10 26639837 26639929 -113676836 + MLT1D LTR MaLR 12 100 -367 2049 126 7 7 chr10 26639929 26640223 -113676542 - AluSx SINE Alu -18 294 1 420 185 111 85 chr10 26640223 26640355 -113676410 + MLT1D LTR MaLR 100 256 -211 2007 153 46 6 chr10 26640372 26640699 -113676066 + MER2 DNA MER2_type 1 340 -4 24 32 0 0 chr10 26641437 26641468 -113675297 + AT_rich Low_complexity Low_complexity 1 31 0 889 142 0 8 chr10 26641646 26641780 -113674985 - FLAM_C SINE Alu 0 133 1 2357 88 13 0 chr10 26642760 26643067 -113673698 + AluY SINE Alu 1 311 0 1447 155 4 4 chr10 26643396 26643622 -113673143 + AluSx SINE Alu 61 286 -26 1881 134 14 7 chr10 26644232 26644515 -113672250 + AluSx SINE Alu 1 285 -27 29 0 0 0 chr10 26644515 26644544 -113672221 + AT_rich Low_complexity Low_complexity 1 29 0 530 292 77 29 chr10 26645083 26645292 -113671473 - MIR SINE MIR -42 220 2 2122 107 11 0 chr10 26645366 26645669 -113671096 + AluSx SINE Alu 1 306 0 228 128 0 0 chr10 26645670 26645709 -113671056 + L1MDa LINE L1 83 121 -6419 * 4334 135 67 52 chr10 26645708 26646397 -113670368 + L1MD1 LINE L1 5378 6083 -159 2367 79 0 25 chr10 26646397 26646715 -113670050 - AluSq SINE Alu -3 310 1 4334 135 67 52 chr10 26646715 26646867 -113669898 + L1MD1 LINE L1 6083 6231 -11 2094 135 0 10 chr10 26647012 26647323 -113669442 + AluSx SINE Alu 1 308 -4 271 158 0 0 chr10 26647575 26647632 -113669133 - L1MB3 LINE L1 0 6183 6127 689 152 22 36 chr10 26647659 26647767 -113668998 - L1MB3 LINE L1 -245 5938 5831 1590 191 10 10 chr10 26647767 26648065 -113668700 - AluJo SINE Alu -14 298 1 689 152 22 36 chr10 26648065 26648094 -113668671 - L1MB3 LINE L1 -352 5831 5803 2213 86 3 38 chr10 26648094 26648408 -113668357 + AluSx SINE Alu 1 303 -9 1849 133 4 4 chr10 26648485 26648756 -113668009 + AluJb SINE Alu 18 288 -24 1843 161 10 73 chr10 26648770 26649181 -113667584 - L1MB3 LINE L1 -377 5806 5422 804 21 21 0 chr10 26649492 26649589 -113667176 - AluY SINE Alu -3 308 210 868 165 8 8 chr10 26649611 26649744 -113667021 - FLAM_C SINE Alu 0 133 1 1259 111 6 11 chr10 26649860 26650041 -113666724 - AluSx SINE Alu -131 181 2 26 0 0 0 chr10 26650041 26650067 -113666698 + AT_rich Low_complexity Low_complexity 1 26 0 188 309 75 11 chr10 26650358 26650452 -113666313 + L2 LINE L2 3173 3272 0 846 191 0 0 chr10 26650454 26650585 -113666180 + FLAM_C SINE Alu 1 131 -2 2112 114 185 27 chr10 26650601 26650968 -113665797 - MSTA LTR MaLR -3 425 1 273 296 148 0 chr10 26651788 26651876 -113664889 + L3 LINE CR1 1449 1549 -28 225 297 106 76 chr10 26652057 26652424 -113664341 - L2 LINE L2 -10 3262 2885 226 79 0 0 chr10 26653047 26653085 -113663680 + LTR66 LTR ERVL 404 441 -169 237 180 0 0 chr10 26653085 26653135 -113663630 + (TA)n Simple_repeat Simple_repeat 2 51 0 2035 125 7 20 chr10 26653218 26653515 -113663250 - AluSx SINE Alu -19 293 1 2124 128 0 10 chr10 26653530 26653842 -113662923 - AluSx SINE Alu -3 309 1 4872 130 52 45 chr10 26654224 26654304 -113662461 + Tigger3b DNA MER2_type 1 79 -2949 2012 123 0 14 chr10 26654304 26654626 -113662139 + AluSx SINE Alu 1 312 0 4872 130 52 45 chr10 26654626 26655171 -113661594 + Tigger3b DNA MER2_type 79 638 -2390 2001 144 0 0 chr10 26655171 26655469 -113661296 + AluSx SINE Alu 1 298 -14 4872 130 52 45 chr10 26655469 26655763 -113661002 + Tigger3b DNA MER2_type 638 928 -303 751 160 0 69 chr10 26655886 26656017 -113660748 + FLAM_C SINE Alu 2 123 -10 23 0 0 0 chr10 26656017 26656040 -113660725 + AT_rich Low_complexity Low_complexity 1 23 0 256 343 112 67 chr10 26657257 26657337 -113659428 + L2 LINE L2 2079 2154 -1160 387 41 0 0 chr10 26657337 26657386 -113659379 + (TC)n Simple_repeat Simple_repeat 1 49 0 256 343 112 67 chr10 26657386 26657799 -113658966 + L2 LINE L2 2154 2608 -706 500 80 13 0 chr10 26657799 26657874 -113658891 + L1MA9 LINE L1 6234 6309 -3 256 343 112 67 chr10 26657874 26658003 -113658762 + L2 LINE L2 2608 2730 -584 209 30 61 0 chr10 26658017 26658050 -113658715 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 894 176 0 20 chr10 26658054 26658207 -113658558 - AluJb SINE Alu -23 289 140 1836 140 43 10 chr10 26658307 26658607 -113658158 - AluSx SINE Alu -2 310 1 23 54 0 0 chr10 26658609 26658646 -113658119 + AT_rich Low_complexity Low_complexity 1 37 0 326 151 174 0 chr10 26659153 26659239 -113657526 + L1M4 LINE L1 4296 4396 -1750 * 498 460 21 61 chr10 26659212 26659242 -113657523 + L1MEc LINE L1 5 35 -6361 180 0 0 0 chr10 26659242 26659262 -113657503 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 498 460 21 61 chr10 26659262 26659609 -113657156 + L1MEc LINE L1 35 367 -6029 1742 177 20 3 chr10 26659640 26659975 -113656790 + AluJo SINE Alu 8 347 0 465 184 16 16 chr10 26659977 26660102 -113656663 + GA-rich Low_complexity Low_complexity 3 127 0 3184 245 60 12 chr10 26660109 26661026 -113655739 + L1MEc LINE L1 393 1353 -5043 258 292 0 10 chr10 26661060 26661156 -113655609 + L1MEc LINE L1 2518 2612 -3603 * 1122 204 43 26 chr10 26661127 26661472 -113655293 + L1MEc LINE L1 3740 4138 -2077 1337 121 35 65 chr10 26661476 26661501 -113655264 + AluSg/x SINE Alu 86 110 -236 2923 82 3 0 chr10 26661501 26661855 -113654910 + THE1A LTR MaLR 1 355 0 1337 121 35 65 chr10 26661855 26662097 -113654668 + AluSg/x SINE Alu 110 346 0 435 247 160 33 chr10 26662697 26662847 -113653918 + MER5A DNA MER1_type 9 177 -12 468 275 188 5 chr10 26663771 26663978 -113652787 - MIR SINE MIR 0 262 18 2076 112 18 0 chr10 26664045 26664347 -113652418 + AluSx SINE Alu 1 307 0 261 273 20 47 chr10 26664352 26664470 -113652295 - MIR SINE MIR -95 113 2 1446 197 4 0 chr10 26666249 26666498 -113650267 - L1PB4 LINE L1 0 6156 5907 1323 128 4 100 chr10 26666550 26666831 -113649934 - L1PA16 LINE L1 -230 5936 5683 1367 148 0 43 chr10 26667239 26667469 -113649296 + AluJb SINE Alu 93 312 0 2289 127 15 66 chr10 26668215 26668338 -113648427 - MLT1B LTR MaLR 0 390 262 2143 114 33 0 chr10 26668338 26668637 -113648128 - AluSx SINE Alu -3 309 1 2289 127 15 66 chr10 26668637 26668811 -113647954 - MLT1B LTR MaLR -128 262 117 1882 187 42 22 chr10 26668811 26669169 -113647596 + MLT1A1 LTR MaLR 1 365 0 2289 127 15 66 chr10 26669169 26669281 -113647484 - MLT1B LTR MaLR -273 117 1 1879 178 0 3 chr10 26669537 26669841 -113646924 + AluJo SINE Alu 1 303 -9 1647 183 7 13 chr10 26670151 26670451 -113646314 + AluJo SINE Alu 5 302 -10 987 120 0 0 chr10 26670465 26670598 -113646167 + FLAM_C SINE Alu 1 133 0 2097 137 0 0 chr10 26671224 26671517 -113645248 - AluSx SINE Alu -19 293 1 257 300 50 78 chr10 26671615 26671795 -113644970 + L2 LINE L2 3138 3312 -1 782 279 70 30 chr10 26672040 26672341 -113644424 + L3 LINE CR1 1133 1445 -132 1785 124 0 4 chr10 26672413 26672662 -113644103 - AluSx SINE Alu -47 265 18 1879 153 0 38 chr10 26672714 26673028 -113643737 + AluJo SINE Alu 1 302 -10 380 74 19 0 chr10 26673028 26673082 -113643683 - HAL1 LINE L1 -1482 1025 971 2205 131 0 0 chr10 26674076 26674388 -113642377 + AluSx SINE Alu 1 312 0 790 263 114 105 chr10 26674452 26675144 -113641621 - HAL1 LINE L1 -140 2367 1662 2196 120 0 10 chr10 26675144 26675445 -113641320 - AluSx SINE Alu -14 298 1 790 263 114 105 chr10 26675445 26675730 -113641035 - HAL1 LINE L1 -845 1662 1381 1612 182 6 42 chr10 26676063 26676376 -113640389 + AluJo SINE Alu 1 302 -10 560 262 37 0 chr10 26676557 26676721 -113640044 + MER112 DNA MER1_type 80 249 -11 462 303 105 110 chr10 26676724 26676990 -113639775 + L3 LINE CR1 580 846 -731 1470 193 44 4 chr10 26676990 26677287 -113639478 - AluJo SINE Alu 0 308 1 462 303 105 110 chr10 26677287 26677418 -113639347 + L3 LINE CR1 846 976 -601 1822 153 0 14 chr10 26677493 26677788 -113638977 - AluSx SINE Alu -21 291 1 186 43 0 0 chr10 26677845 26677868 -113638897 + (T)n Simple_repeat Simple_repeat 1 23 0 1012 166 0 6 chr10 26677987 26678156 -113638609 + AluJb SINE Alu 136 303 -9 294 189 0 19 chr10 26678168 26678221 -113638544 - Alu SINE Alu -247 54 3 57 16 0 0 chr10 26678233 26678297 -113638468 + AT_rich Low_complexity Low_complexity 1 64 0 2431 95 0 0 chr10 26678797 26679102 -113637663 + AluSg SINE Alu 1 305 -5 263 176 54 68 chr10 26679316 26679390 -113637375 + AluSp SINE Alu 97 169 -134 2161 133 0 0 chr10 26680084 26680386 -113636379 - AluSq SINE Alu -11 302 1 1627 165 7 24 chr10 26680391 26680552 -113636213 - AluJo SINE Alu -18 294 139 1962 160 10 3 chr10 26680552 26680858 -113635907 - AluJb SINE Alu -4 308 1 1627 165 7 24 chr10 26680858 26680993 -113635772 - AluJo SINE Alu -173 139 3 609 151 12 0 chr10 26681173 26681259 -113635506 + AluS SINE Alu 2 88 -224 1161 125 6 6 chr10 26681361 26681529 -113635236 - AluSx SINE Alu -144 168 1 2202 182 78 25 chr10 26681534 26681984 -113634781 + MLT2B1 LTR ERVL 5 485 -35 2635 113 83 10 chr10 26681984 26682383 -113634382 + MSTA LTR MaLR 1 428 0 2202 182 78 25 chr10 26682383 26682422 -113634343 + MLT2B1 LTR ERVL 485 520 0 758 179 0 8 chr10 26682719 26682842 -113633923 + FLAM_C SINE Alu 1 122 -11 351 316 9 26 chr10 26683081 26683195 -113633570 + L2 LINE L2 3178 3289 -24 206 326 67 0 chr10 26683508 26683597 -113633168 + MIR SINE MIR 84 146 -62 259 32 0 0 chr10 26683668 26683699 -113633066 + (TTTTA)n Simple_repeat Simple_repeat 2 105 0 1938 127 33 0 chr10 26683699 26683974 -113632791 - AluSx SINE Alu -28 284 1 201 143 125 89 chr10 26684583 26684639 -113632126 - L2 LINE L2 -56 3257 3200 1232 263 178 61 chr10 26685070 26686212 -113630553 - L2 LINE L2 -37 3276 2009 472 325 146 36 chr10 26686247 26686610 -113630155 - L2 LINE L2 0 3272 2870 1338 130 10 0 chr10 26686716 26686916 -113629849 - AluSx SINE Alu -57 255 54 227 322 168 37 chr10 26686922 26687512 -113629253 - L2 LINE L2 -616 2698 2032 288 0 0 0 chr10 26688040 26688072 -113628693 + (CA)n Simple_repeat Simple_repeat 2 33 0 1706 141 36 7 chr10 26689797 26690074 -113626691 - AluJo SINE Alu -7 305 21 1859 159 27 3 chr10 26690358 26690653 -113626112 - AluJb SINE Alu -9 303 2 2263 122 3 0 chr10 26691026 26691337 -113625428 - AluSx SINE Alu 0 312 1 754 185 7 30 chr10 26691349 26691484 -113625281 - FLAM_C SINE Alu -1 132 1 23 0 0 29 chr10 26692559 26692575 -113624190 + AT_rich Low_complexity Low_complexity 1 16 -17 2291 86 7 3 chr10 26692575 26692866 -113623899 + AluSx SINE Alu 1 292 -20 23 0 0 29 chr10 26692866 26692883 -113623882 + AT_rich Low_complexity Low_complexity 16 33 0 593 178 178 7 chr10 26692907 26693059 -113623706 - MIR SINE MIR -1 261 84 642 200 0 0 chr10 26693091 26693196 -113623569 + AluSq/x SINE Alu 3 107 -206 202 192 19 19 chr10 26693216 26693268 -113623497 + (TAA)n Simple_repeat Simple_repeat 2 53 0 879 211 6 6 chr10 26693293 26693459 -113623306 - AluJo SINE Alu -146 166 1 304 346 29 0 chr10 26693462 26693566 -113623199 - MIR SINE MIR -60 148 42 2828 160 20 71 chr10 26693912 26694133 -113622632 + LTR64 LTR ERVK 1 232 -326 1979 114 34 20 chr10 26694133 26694430 -113622335 - AluSx SINE Alu -11 301 1 2828 160 20 71 chr10 26694430 26694796 -113621969 + LTR64 LTR ERVK 232 558 0 558 105 58 0 chr10 26694952 26695038 -113621727 + AluY SINE Alu 204 294 -17 1788 165 3 10 chr10 26695089 26695380 -113621385 + AluJo SINE Alu 1 289 -23 2200 104 4 0 chr10 26695391 26695671 -113621094 + AluSx SINE Alu 6 286 -26 252 269 65 11 chr10 26695837 26695930 -113620835 - L2 LINE L2 -6 3266 3169 1231 167 4 44 chr10 26696279 26696506 -113620259 - AluJo SINE Alu -9 303 86 358 232 29 29 chr10 26696554 26696696 -113620069 + MIR SINE MIR 11 151 -62 525 292 129 10 chr10 26696697 26696906 -113619859 + MIR SINE MIR 21 254 -8 211 363 44 0 chr10 26696918 26697009 -113619756 + MIR SINE MIR 167 261 -1 1508 192 18 59 chr10 26697099 26697437 -113619328 - MLT1D LTR MaLR -1 504 181 1241 87 0 6 chr10 26697446 26697607 -113619158 - AluSp SINE Alu -16 297 138 918 153 41 29 chr10 26697610 26697780 -113618985 - MLT1D LTR MaLR -316 189 18 1811 132 3 53 chr10 26698022 26698325 -113618440 - AluJo SINE Alu -22 290 3 1568 193 33 20 chr10 26698855 26699161 -113617604 + AluJo SINE Alu 1 310 -2 195 42 0 0 chr10 26699181 26699205 -113617560 + (TTTTC)n Simple_repeat Simple_repeat 3 26 0 641 165 83 0 chr10 26699208 26699317 -113617448 - FLAM_C SINE Alu -24 119 2 419 236 154 0 chr10 26699693 26699816 -113616949 - MIR SINE MIR -49 213 72 758 154 15 22 chr10 26699818 26699954 -113616811 + AluJb SINE Alu 85 219 -93 407 188 0 0 chr10 26699956 26700025 -113616740 + AluSp/q SINE Alu 190 258 -45 987 123 6 11 chr10 26700049 26700228 -113616537 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 892 129 79 7 chr10 26701162 26701301 -113615464 + FAM SINE Alu 18 166 -19 182 229 83 0 chr10 26701417 26701465 -113615300 + L2 LINE L2 3262 3313 0 1669 155 38 17 chr10 26701495 26701786 -113614979 + AluJo SINE Alu 1 297 -15 2816 196 22 17 chr10 26701795 26702337 -113614428 - MER44D DNA MER2_type 0 605 6 1548 152 168 0 chr10 26702800 26703109 -113613656 + MER46B DNA MER2_type 1 236 0 2113 137 0 0 chr10 26703329 26703629 -113613136 + AluSx SINE Alu 1 300 -12 22 0 0 0 chr10 26703808 26703830 -113612935 + AT_rich Low_complexity Low_complexity 1 22 0 3025 115 31 31 chr10 26703835 26703974 -113612791 - L1MB2 LINE L1 -7 6164 6026 1327 106 125 19 chr10 26703974 26704182 -113612583 + MER30 DNA MER1_type 1 230 0 3025 115 31 31 chr10 26704182 26704519 -113612246 - L1MB2 LINE L1 -144 6027 5688 1784 87 4 0 chr10 26705173 26705404 -113611361 - L1PA8 LINE L1 0 6172 5941 2437 45 0 7 chr10 26706548 26706840 -113609925 - AluY SINE Alu -20 291 2 2037 120 30 7 chr10 26707004 26707304 -113609461 - AluSq SINE Alu -6 307 1 1985 96 11 28 chr10 26707632 26707914 -113608851 - AluSq SINE Alu -5 308 32 304 263 38 0 chr10 26707954 26708034 -113608731 - L2 LINE L2 -5 3267 3185 676 270 58 39 chr10 26708058 26708317 -113608448 + Charlie7 DNA MER1_type 1 264 -2348 1933 112 9 71 chr10 26708342 26708665 -113608100 - AluSx SINE Alu -7 305 3 2558 217 35 68 chr10 26708707 26709192 -113607573 - L1MB8 LINE L1 0 6178 5678 955 32 24 0 chr10 26709192 26709318 -113607447 + (TTTC)n Simple_repeat Simple_repeat 2 130 0 1603 171 16 0 chr10 26709322 26709579 -113607186 - AluSx SINE Alu -51 261 1 2558 217 35 68 chr10 26709579 26710292 -113606473 - L1MB8 LINE L1 -503 5675 5024 1182 106 12 0 chr10 26710340 26710501 -113606264 - AluSg/x SINE Alu -17 295 133 342 253 0 10 chr10 26710501 26710600 -113606165 - L1MB8 LINE L1 -1143 5003 4906 * 3896 236 30 35 chr10 26710593 26711663 -113605102 - L1MB8 LINE L1 -1572 4574 3509 1389 146 172 4 chr10 26711663 26711930 -113604835 - AluJb SINE Alu 0 312 1 3896 236 30 35 chr10 26711930 26712040 -113604725 - L1MB8 LINE L1 -2637 3509 3400 499 106 15 0 chr10 26712045 26712111 -113604654 + AluJ/FLAM SINE Alu 2 68 -244 5965 53 0 7 chr10 26712201 26712212 -113604553 + L1P LINE L1 3042 3052 -3094 5242 69 0 0 chr10 26712212 26712832 -113603933 - L1PA5 LINE L1 -5 6149 5530 5965 53 0 7 chr10 26712832 26713588 -113603177 + L1P LINE L1 3052 3804 -2342 694 244 62 31 chr10 26713585 26713642 -113603123 - L1MB8 LINE L1 -2740 3406 3352 * 786 125 62 47 chr10 26713642 26713770 -113602995 - FLAM_C SINE Alu -3 130 1 694 244 62 31 chr10 26713770 26714036 -113602729 - L1MB8 LINE L1 -2794 3352 3073 5654 193 24 20 chr10 26714071 26715843 -113600922 + L1PBa LINE L1 1 985 -5219 1012 117 7 0 chr10 26715843 26715980 -113600785 + AluSq/x SINE Alu 1 138 -175 10329 187 26 6 chr10 26715982 26718084 -113598681 + L1 LINE L1 2230 4373 -1773 579 85 0 12 chr10 26718087 26718169 -113598596 + L1P5 LINE L1 5447 5527 -624 1876 158 3 3 chr10 26718169 26718460 -113598305 - AluJb SINE Alu -20 292 2 936 156 0 15 chr10 26718481 26718616 -113598149 - FLAM_C SINE Alu 0 133 1 1596 197 44 38 chr10 26718616 26719081 -113597684 - L1MB8 LINE L1 -3061 3085 2615 374 234 219 0 chr10 26719197 26719325 -113597440 - L1MEc LINE L1 -4699 1697 1542 751 236 117 37 chr10 26719349 26719701 -113597064 - L1MEc LINE L1 -5020 1376 997 1962 140 13 0 chr10 26719782 26720082 -113596683 - AluSx SINE Alu -8 304 1 399 256 30 57 chr10 26720198 26720277 -113596488 + L1MEc LINE L1 1515 1544 -963 2453 125 120 5 chr10 26720277 26720661 -113596104 + MSTA LTR MaLR 1 428 0 399 256 30 57 chr10 26720661 26720784 -113595981 + L1MEc LINE L1 1544 1669 -838 1698 176 63 9 chr10 26720790 26721109 -113595656 + MER7A DNA MER2_type 1 334 -12 387 290 105 15 chr10 26721429 26721575 -113595190 + MER5A DNA MER1_type 26 183 -6 1027 212 46 92 chr10 26721619 26721935 -113594830 - MER21B LTR ERV1 -107 809 497 796 230 91 34 chr10 26721934 26722243 -113594522 - MER21B LTR ERV1 -486 377 1 * 2102 140 109 18 chr10 26722306 26722692 -113594073 - MSTA LTR MaLR -2 426 6 417 281 67 28 chr10 26722716 26722894 -113593871 + MIR SINE MIR 14 198 -64 1733 162 3 26 chr10 26722902 26723204 -113593561 + AluJo SINE Alu 1 295 -17 21 0 0 0 chr10 26723572 26723593 -113593172 + AT_rich Low_complexity Low_complexity 1 21 0 223 68 85 0 chr10 26723633 26723692 -113593073 + (TA)n Simple_repeat Simple_repeat 1 64 0 2015 129 28 3 chr10 26723908 26724195 -113592570 - AluSx SINE Alu -18 294 1 606 180 0 0 chr10 26724394 26724494 -113592271 + FLAM_C SINE Alu 32 131 -12 21 0 0 0 chr10 26724494 26724515 -113592250 + AT_rich Low_complexity Low_complexity 1 21 0 1484 252 96 67 chr10 26724543 26724914 -113591851 + MLT1G1 LTR MaLR 2 361 -234 771 198 86 30 chr10 26724914 26725111 -113591654 + MER3 DNA MER1_type 2 209 0 1484 252 96 67 chr10 26725111 26725214 -113591551 + MLT1G1 LTR MaLR 361 460 -135 2239 107 3 0 chr10 26725214 26725513 -113591252 - AluSg SINE Alu -10 300 1 1484 252 96 67 chr10 26725513 26725601 -113591164 + MLT1G1 LTR MaLR 460 581 -14 1661 144 44 44 chr10 26725609 26725907 -113590858 - AluJo SINE Alu -4 308 11 376 256 0 0 chr10 26726325 26726403 -113590362 - MER91A DNA MER1_type -38 158 81 558 108 0 0 chr10 26727479 26727562 -113589203 + (CA)n Simple_repeat Simple_repeat 2 84 0 1730 163 0 18 chr10 26730212 26730495 -113586270 + AluJo SINE Alu 5 282 -30 195 308 55 22 chr10 26731065 26731156 -113585609 + MIR SINE MIR 156 249 -13 444 323 111 0 chr10 26731800 26731989 -113584776 + L3b LINE CR1 1150 1359 -224 1710 133 0 0 chr10 26732070 26732310 -113584455 - AluSx SINE Alu -72 240 1 820 166 83 7 chr10 26732311 26732456 -113584309 - AluJb SINE Alu -24 288 133 794 168 0 0 chr10 26733068 26733187 -113583578 + FLAM_A SINE Alu 13 131 -11 2076 93 41 0 chr10 26733192 26733461 -113583304 + AluSx SINE Alu 6 285 -27 889 238 32 20 chr10 26733745 26733993 -113582772 + MIR SINE MIR 12 262 0 207 0 0 0 chr10 26735134 26735157 -113581608 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1884 156 7 7 chr10 26735370 26735677 -113581088 + AluJo SINE Alu 1 307 -5 2035 144 30 0 chr10 26735698 26735997 -113580768 + AluSx SINE Alu 1 308 -4 1003 103 0 58 chr10 26736004 26736159 -113580606 + FRAM SINE Alu 27 172 -4 2180 120 0 19 chr10 26736160 26736476 -113580289 + AluSx SINE Alu 1 310 -2 2450 107 79 60 chr10 26738872 26739121 -113577644 + MSTA LTR MaLR 1 263 -165 1805 152 50 0 chr10 26739121 26739398 -113577367 - AluSx SINE Alu -21 291 1 2450 107 79 60 chr10 26739398 26739568 -113577197 + MSTA LTR MaLR 263 428 0 514 311 40 0 chr10 26739579 26739730 -113577035 + L2 LINE L2 3111 3267 -5 2288 106 0 3 chr10 26739950 26740251 -113576514 + AluSx SINE Alu 1 300 -12 510 169 38 141 chr10 26741034 26741071 -113575694 - HAL1 LINE L1 -10 2497 2458 1822 145 7 3 chr10 26741071 26741397 -113575368 + AluSx SINE Alu 1 327 0 510 169 38 141 chr10 26741397 26741571 -113575194 - HAL1 LINE L1 -49 2458 2307 760 182 15 8 chr10 26741659 26741791 -113574974 - FLAM_C SINE Alu 0 133 1 24 32 0 0 chr10 26741871 26741902 -113574863 + AT_rich Low_complexity Low_complexity 1 31 0 231 238 286 0 chr10 26742094 26742199 -113574566 - L1MC4 LINE L1 -312 7730 7596 1107 149 52 85 chr10 26742209 26742221 -113574544 + Tigger1 DNA MER2_type 2 13 -2405 1924 119 0 11 chr10 26742221 26742490 -113574275 - AluSx SINE Alu -9 303 38 1107 149 52 85 chr10 26742490 26742725 -113574040 + Tigger1 DNA MER2_type 13 241 -2177 2139 99 7 16 chr10 26742725 26743029 -113573736 - AluSx SINE Alu -7 305 5 3809 106 38 34 chr10 26743032 26743645 -113573120 + Tigger1 DNA MER2_type 1076 1690 -728 636 167 25 7 chr10 26743647 26743885 -113572880 + AluJ SINE Alu 2 301 -11 5103 111 23 8 chr10 26743885 26744615 -113572150 + Tigger1 DNA MER2_type 1678 2418 0 2075 135 0 0 chr10 26744686 26744989 -113571776 + AluSx SINE Alu 1 303 0 203 304 0 0 chr10 26745003 26745059 -113571706 + L2 LINE L2 3257 3312 -1 225 196 0 0 chr10 26745479 26745525 -113571240 + GA-rich Low_complexity Low_complexity 2 47 0 2267 128 0 0 chr10 26745931 26746243 -113570522 + AluSx SINE Alu 1 312 0 448 198 18 30 chr10 26746630 26746797 -113569968 + GA-rich Low_complexity Low_complexity 1 165 0 266 203 0 14 chr10 26746842 26746911 -113569854 + GA-rich Low_complexity Low_complexity 2 69 0 1981 132 42 3 chr10 26747656 26747945 -113568820 - AluSx SINE Alu -12 300 1 864 195 11 74 chr10 26748369 26748559 -113568206 - AluJo SINE Alu -84 228 51 1354 166 40 8 chr10 26748749 26748996 -113567769 - L1MA4A LINE L1 0 6303 6049 1814 159 7 7 chr10 26749970 26750259 -113566506 - AluJo SINE Alu -23 289 1 2021 104 4 0 chr10 26750675 26750943 -113565822 + AluSx SINE Alu 35 303 -9 228 297 11 11 chr10 26752559 26752650 -113564115 + L1MC4 LINE L1 6613 6703 -1339 1695 166 6 56 chr10 26752659 26752978 -113563787 - AluJo SINE Alu -9 303 1 292 187 75 84 chr10 26753490 26753597 -113563168 + MLT1K LTR MaLR 461 566 -22 1135 143 0 11 chr10 26753752 26753927 -113562838 - FRAM SINE Alu -6 170 1 2447 159 39 14 chr10 26754591 26754624 -113562141 - L1MA6 LINE L1 -4 6296 6265 2688 121 3 18 chr10 26754624 26755005 -113561760 + THE1C LTR MaLR 1 375 0 2447 159 39 14 chr10 26755005 26755412 -113561353 - L1MA6 LINE L1 -35 6265 5845 984 182 0 12 chr10 26755699 26755869 -113560896 - FRAM SINE Alu -7 169 2 746 150 0 17 chr10 26755948 26756068 -113560697 + FLAM_C SINE Alu 2 119 -24 180 0 0 0 chr10 26756068 26756088 -113560677 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 383 284 21 0 chr10 26756138 26756233 -113560532 + MIR SINE MIR 158 254 -8 2229 110 0 0 chr10 26756264 26756554 -113560211 + AluSg SINE Alu 1 290 -20 612 175 0 0 chr10 26756564 26756661 -113560104 - FLAM_A SINE Alu -8 134 38 274 242 125 47 chr10 26756807 26756935 -113559830 - HAL1 LINE L1 -2112 395 258 819 204 25 13 chr10 26757026 26757183 -113559582 - AluJo SINE Alu -152 160 2 2055 148 0 0 chr10 26757474 26757771 -113558994 - AluSx SINE Alu -15 297 1 307 222 14 0 chr10 26757775 26757847 -113558918 - MIR SINE MIR -101 161 89 681 103 93 0 chr10 26757849 26757946 -113558819 + AluSq/x SINE Alu 1 106 -207 2260 93 0 13 chr10 26759159 26759460 -113557305 - AluSq SINE Alu -16 297 1 485 139 25 13 chr10 26759535 26759614 -113557151 + MADE1 DNA Mariner 1 80 0 809 265 31 27 chr10 26759793 26760016 -113556749 + MIR SINE MIR 25 248 -14 1391 109 27 50 chr10 26760053 26760274 -113556491 - AluSg/x SINE Alu 0 312 97 1021 86 17 11 chr10 26760626 26760800 -113555965 + (TTTC)n Simple_repeat Simple_repeat 4 178 0 1489 178 19 11 chr10 26760809 26761146 -113555619 - AluJo SINE Alu 0 375 37 248 275 18 128 chr10 26761680 26761738 -113555027 + L2 LINE L2 2963 3005 -267 2271 107 7 0 chr10 26761738 26762047 -113554718 + AluSx SINE Alu 2 312 0 248 275 18 128 chr10 26762047 26762097 -113554668 + L2 LINE L2 3005 3059 -213 971 131 0 0 chr10 26762484 26762614 -113554151 - FLAM_A SINE Alu 0 133 4 335 181 44 0 chr10 26762808 26762968 -113553797 + (TA)n Simple_repeat Simple_repeat 2 168 0 21 36 0 0 chr10 26764807 26764835 -113551930 + AT_rich Low_complexity Low_complexity 1 28 0 1651 147 11 26 chr10 26765506 26765772 -113550993 + AluJo SINE Alu 24 285 -27 2158 119 0 28 chr10 26766955 26767273 -113549492 + AluSq SINE Alu 1 309 -4 505 202 23 31 chr10 26767383 26767512 -113549253 + L1ME3A LINE L1 6038 6165 -5 252 254 62 54 chr10 26767561 26767691 -113549074 - MIR3 SINE MIR -37 171 41 1256 169 153 8 chr10 26767744 26767882 -113548883 - AluJo SINE Alu -13 299 182 216 0 0 0 chr10 26767882 26767906 -113548859 + (TTA)n Simple_repeat Simple_repeat 1 24 0 1256 169 153 8 chr10 26767906 26768028 -113548737 - AluJo SINE Alu -130 182 1 297 0 0 0 chr10 26768301 26768334 -113548431 + (CA)n Simple_repeat Simple_repeat 2 34 0 212 360 51 23 chr10 26768880 26769055 -113547710 + L2 LINE L2 2173 2352 -962 1593 194 0 20 chr10 26769064 26769357 -113547408 + AluJb SINE Alu 1 287 -25 2073 119 30 0 chr10 26769357 26769652 -113547113 - AluSc SINE Alu -5 304 1 1646 102 16 0 chr10 26769874 26770120 -113546645 - L1MA3 LINE L1 -232 6073 5824 872 209 0 6 chr10 26771088 26771260 -113545505 + AluJo SINE Alu 123 293 -19 2234 115 0 3 chr10 26771350 26771646 -113545119 + AluSx SINE Alu 1 295 -17 931 132 0 183 chr10 26772614 26772849 -113543916 - 7SK RNA RNA -1 192 1 265 293 40 0 chr10 26772975 26773050 -113543715 + MIR SINE MIR 89 166 -96 1375 209 54 7 chr10 26773050 26773327 -113543438 + AluJo SINE Alu 1 290 -22 315 384 20 20 chr10 26773455 26773601 -113543164 + L2 LINE L2 3127 3272 0 2041 129 0 32 chr10 26773906 26774215 -113542550 + AluSx SINE Alu 1 299 -13 180 320 142 41 chr10 26774351 26774548 -113542217 + MIR SINE MIR 37 253 -9 191 260 20 0 chr10 26774882 26774932 -113541833 - MIR SINE MIR -115 147 97 305 217 0 0 chr10 26774944 26775004 -113541761 - AluJb SINE Alu -78 224 165 378 224 112 43 chr10 26775108 26775130 -113541635 - L1MA10 LINE L1 -1 6333 6312 3028 236 32 47 chr10 26775130 26775622 -113541143 - L1ME1 LINE L1 -9 6157 5659 2259 125 0 0 chr10 26775622 26775933 -113540832 + AluY SINE Alu 1 311 0 3028 236 32 47 chr10 26775933 26776024 -113540741 - L1ME1 LINE L1 -507 5659 5568 2250 132 0 0 chr10 26776024 26776335 -113540430 + AluSx SINE Alu 2 312 0 3028 236 32 47 chr10 26776335 26776720 -113540045 - L1ME1 LINE L1 -598 5568 5209 1013 202 149 10 chr10 26776725 26777027 -113539738 + L2 LINE L2 2447 2790 -524 292 320 64 74 chr10 26778927 26778990 -113537775 - MIR SINE MIR -39 223 161 1092 123 0 0 chr10 26778990 26779145 -113537620 + L1PA16 LINE L1 6010 6164 -2 292 320 64 74 chr10 26779145 26779284 -113537481 - MIR SINE MIR -101 161 23 2973 259 118 20 chr10 26779643 26780847 -113535918 + L2 LINE L2 1881 3206 -107 459 274 85 57 chr10 26781027 26781275 -113535490 - MLT1L LTR MaLR -134 481 227 472 300 106 82 chr10 26781415 26782101 -113534664 - HAL1 LINE L1 -1425 1082 380 247 48 24 24 chr10 26782361 26782403 -113534362 + (CATAT)n Simple_repeat Simple_repeat 2 43 0 1609 191 14 0 chr10 26782445 26782750 -113534015 - AluJo SINE Alu 0 309 1 341 280 9 0 chr10 26782790 26782897 -113533868 - MIR3 SINE MIR -10 198 91 490 227 67 0 chr10 26783014 26783164 -113533601 + MIR SINE MIR 103 262 0 4187 106 18 3 chr10 26783258 26784309 -113532456 + L1PA10 LINE L1 4731 5789 -379 189 229 0 0 chr10 26784309 26784357 -113532408 + (TATATG)n Simple_repeat Simple_repeat 3 50 0 2809 108 11 0 chr10 26784357 26784729 -113532036 + L1PA10 LINE L1 5782 6157 -11 2143 120 20 7 chr10 26786403 26786704 -113530061 + THE1B LTR MaLR 1 305 -59 9926 147 27 25 chr10 26786713 26788429 -113528336 + L1P LINE L1 11 1730 -4416 6996 45 9 7 chr10 26788531 26789401 -113527364 + L1PA6 LINE L1 5282 6153 -1 548 82 0 0 chr10 26789401 26789474 -113527291 + THE1B LTR MaLR 292 364 0 449 278 151 28 chr10 26790011 26790223 -113526542 + MIR SINE MIR 25 262 0 1708 123 112 0 chr10 26790306 26790566 -113526199 - AluSx SINE Alu -23 289 1 2286 107 0 7 chr10 26791499 26791798 -113524967 - AluSc SINE Alu -11 298 2 626 200 91 30 chr10 26791911 26792076 -113524689 + MER104 DNA Tc2 6 180 0 215 274 0 27 chr10 26792097 26792170 -113524595 + T-rich Low_complexity Low_complexity 4 74 0 344 158 0 0 chr10 26792359 26792416 -113524349 - Alu SINE Alu 0 301 245 2221 60 0 14 chr10 26792539 26792823 -113523942 + AluY SINE Alu 32 311 0 736 184 0 8 chr10 26793681 26793806 -113522959 + FRAM SINE Alu 23 146 -30 255 103 0 0 chr10 26793809 26793848 -113522917 + (CA)n Simple_repeat Simple_repeat 2 40 0 334 335 33 7 chr10 26794372 26794524 -113522241 + MIR SINE MIR 13 168 -94 7067 233 80 23 chr10 26794738 26797446 -113519319 + L1ME1 LINE L1 2715 5602 -564 2244 124 3 0 chr10 26797446 26797745 -113519020 - AluSx SINE Alu -12 300 1 7067 233 80 23 chr10 26797745 26797960 -113518805 + L1ME1 LINE L1 5602 5803 -363 566 60 0 12 chr10 26797967 26798051 -113518714 + (GAA)n Simple_repeat Simple_repeat 2 84 0 3417 123 35 10 chr10 26798058 26798656 -113518109 + MER4B LTR ERV1 1 779 0 1009 231 86 25 chr10 26798656 26798982 -113517783 + L1ME1 LINE L1 5834 6334 0 1312 221 132 72 chr10 26799283 26799855 -113516910 + MLT1E1 LTR MaLR 1 654 0 1569 180 14 24 chr10 26800042 26800336 -113516429 - AluJo SINE Alu -19 293 3 1253 100 0 0 chr10 26801308 26801468 -113515297 - AluSg/x SINE Alu -10 300 141 1279 189 142 12 chr10 26802074 26802397 -113514368 - MLT1A1 LTR MaLR 0 365 1 358 322 63 21 chr10 26802438 26802581 -113514184 + MLT1K LTR MaLR 190 338 -250 1929 137 3 45 chr10 26802711 26803024 -113513741 - AluJb SINE Alu -12 300 1 264 318 0 0 chr10 26803045 26803108 -113513657 + MLT1K LTR MaLR 518 580 -8 514 311 69 49 chr10 26803139 26803547 -113513218 - L1ME4a LINE L1 -295 5826 5411 1640 201 14 0 chr10 26803968 26804262 -113512503 - AluJo SINE Alu -11 301 4 815 137 0 0 chr10 26804264 26804381 -113512384 - AluJo SINE Alu -176 136 20 2074 140 6 26 chr10 26804747 26805090 -113511675 - MER1B DNA MER1_type -1 336 1 259 118 0 0 chr10 26805462 26805513 -113511252 - LTR66 LTR ERVL -169 441 391 2262 110 10 0 chr10 26805642 26805943 -113510822 + AluSp SINE Alu 1 304 -9 354 282 51 8 chr10 26806336 26806453 -113510312 - MIR SINE MIR -140 122 1 2206 104 7 3 chr10 26806833 26807142 -113509623 - AluSg SINE Alu 0 310 1 307 261 97 37 chr10 26807341 26807475 -113509290 + MIR SINE MIR 3 144 -118 1423 202 52 0 chr10 26807585 26807699 -113509066 + AluJo SINE Alu 1 108 -204 191 30 0 61 chr10 26807699 26807732 -113509033 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 1423 202 52 0 chr10 26807732 26807904 -113508861 + AluJo SINE Alu 108 302 -10 267 31 0 0 chr10 26807904 26807936 -113508829 + (GA)n Simple_repeat Simple_repeat 1 32 0 227 171 0 0 chr10 26808615 26808656 -113508109 - L1 LINE L1 -1503 4643 4603 * 2663 136 77 30 chr10 26808654 26808906 -113507859 + L1MA6 LINE L1 5362 5601 -699 843 181 0 0 chr10 26808906 26809039 -113507726 + FLAM_C SINE Alu 1 133 0 2663 136 77 30 chr10 26809039 26809280 -113507485 + L1MA6 LINE L1 5601 5878 -422 926 234 19 10 chr10 26809277 26809407 -113507358 - L1MEc LINE L1 -6150 246 112 * 1443 156 116 7 chr10 26809407 26809682 -113507083 - AluJo SINE Alu -7 305 1 926 234 19 10 chr10 26809682 26809760 -113507005 - L1MEc LINE L1 -6284 112 36 1610 121 42 170 chr10 26811767 26812196 -113504569 - MLT1A2 LTR MaLR 0 374 1 270 274 47 9 chr10 26812768 26812874 -113503891 - MIR SINE MIR -50 212 103 1117 192 220 0 chr10 26813020 26813265 -113503500 + AluJo SINE Alu 1 299 -3 2311 98 37 40 chr10 26813533 26813909 -113502856 - THE1C LTR MaLR 0 375 1 2972 9 0 0 chr10 26813923 26814239 -113502526 + AluYb8 SINE Alu 1 316 -2 284 185 0 15 chr10 26814340 26814405 -113502360 + MER5A DNA MER1_type 4 67 -122 1066 147 0 0 chr10 26814409 26814559 -113502206 + FRAM SINE Alu 1 142 -34 192 204 0 0 chr10 26814582 26814631 -113502134 + MER5A DNA MER1_type 61 109 -80 261 145 162 156 chr10 26814794 26814884 -113501881 + MIR SINE MIR 71 159 -103 3704 151 45 17 chr10 26814884 26815488 -113501277 - L1MC1 LINE L1 -1 6332 5705 2128 128 3 0 chr10 26815488 26815777 -113500988 + AluSx SINE Alu 1 290 -22 3704 151 45 17 chr10 26815777 26815866 -113500899 - L1MC1 LINE L1 -628 5705 5620 261 145 162 156 chr10 26815866 26815954 -113500811 + MIR SINE MIR 159 250 -12 385 231 13 0 chr10 26815965 26816043 -113500722 - MER115 DNA AcHobo 0 693 615 595 203 36 0 chr10 26817093 26817231 -113499534 + L1MB8 LINE L1 5625 5767 -399 477 224 87 43 chr10 26817296 26817457 -113499308 + L1MB8 LINE L1 5992 6159 -19 264 30 0 0 chr10 26817457 26817490 -113499275 + (TG)n Simple_repeat Simple_repeat 2 34 0 1810 161 3 7 chr10 26817490 26817775 -113498990 - AluJb SINE Alu -28 284 1 439 246 15 52 chr10 26817793 26817927 -113498838 - FLAM_C SINE Alu -3 130 2 301 362 9 0 chr10 26817950 26818055 -113498710 + MER5A DNA MER1_type 63 168 -21 22 0 0 0 chr10 26818113 26818135 -113498630 + AT_rich Low_complexity Low_complexity 1 22 0 244 208 7 174 chr10 26818279 26818428 -113498337 + MER103 DNA DNA 42 165 -1 2035 147 0 16 chr10 26819060 26819367 -113497398 - AluSx SINE Alu -10 302 1 47 19 0 0 chr10 26819458 26819512 -113497253 + AT_rich Low_complexity Low_complexity 1 54 0 1722 176 3 19 chr10 26819961 26820274 -113496491 - AluJb SINE Alu -4 308 1 747 259 84 32 chr10 26820670 26820924 -113495841 + L2 LINE L2 2450 2689 -624 1897 160 3 10 chr10 26820924 26821230 -113495535 + AluJo SINE Alu 1 304 -8 747 259 84 32 chr10 26821230 26821552 -113495213 + L2 LINE L2 2689 3056 -257 1710 171 3 17 chr10 26821887 26822179 -113494586 - AluJo SINE Alu -24 288 1 320 331 95 6 chr10 26822624 26822793 -113493972 + MIR SINE MIR 52 235 -27 481 267 152 9 chr10 26822944 26823161 -113493604 + MIR SINE MIR 12 259 -3 1850 172 7 13 chr10 26823276 26823578 -113493187 + AluJb SINE Alu 1 300 -12 577 195 16 0 chr10 26825360 26825483 -113491282 + MIR SINE MIR 51 175 -87 1869 142 25 0 chr10 26825523 26825804 -113490961 - AluJb SINE Alu -24 288 1 1707 172 21 0 chr10 26826129 26826455 -113490310 - AluSq SINE Alu 0 332 1 1676 112 0 25 chr10 26826664 26826906 -113489859 - MER46A DNA MER2_type 0 236 1 297 337 97 48 chr10 26826959 26827401 -113489364 + L2 LINE L2 1896 2359 -955 539 255 131 25 chr10 26827541 26827855 -113488910 + L2 LINE L2 2967 3313 0 237 178 0 0 chr10 26829075 26829120 -113487645 + G-rich Low_complexity Low_complexity 2 46 0 27 0 0 0 chr10 26829121 26829148 -113487617 + GC_rich Low_complexity Low_complexity 1 27 0 201 206 0 48 chr10 26829278 26829341 -113487424 + (CCG)n Simple_repeat Simple_repeat 2 61 0 221 267 9 0 chr10 26829579 26829695 -113487070 + (CACCT)n Simple_repeat Simple_repeat 1 117 0 185 241 35 17 chr10 26830616 26830674 -113486091 - MER5A DNA MER1_type -9 180 122 2372 101 122 10 chr10 26831379 26831764 -113485001 - MSTA LTR MaLR 0 428 1 1631 190 0 7 chr10 26832081 26832365 -113484400 + AluJo SINE Alu 1 282 -30 180 0 0 0 chr10 26832373 26832393 -113484372 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1230 135 16 0 chr10 26832551 26832736 -113484029 - L1PA15 LINE L1 0 6165 5978 213 218 0 0 chr10 26832875 26832930 -113483835 + T-rich Low_complexity Low_complexity 1 55 0 2841 130 4 30 chr10 26832932 26833162 -113483603 - L1MA6 LINE L1 0 6300 6066 1956 153 24 12 chr10 26833162 26833495 -113483270 + MER1B DNA MER1_type 1 337 0 2841 130 4 30 chr10 26833495 26833763 -113483002 - L1MA6 LINE L1 -234 6066 5815 925 201 0 34 chr10 26833764 26833883 -113482882 - L1 LINE L1 -1039 5107 4995 2133 117 0 0 chr10 26833883 26834191 -113482574 - AluSx SINE Alu 0 308 1 925 201 0 34 chr10 26834191 26834274 -113482491 - L1 LINE L1 -1151 4995 4911 420 282 0 67 chr10 26835946 26836095 -113480670 + MER103 DNA DNA 16 154 -12 1940 117 3 77 chr10 26836836 26837160 -113479605 - AluSx SINE Alu -12 300 1 982 110 0 22 chr10 26837162 26837298 -113479467 - AluJo/FLAM SINE Alu -169 133 1 514 266 142 19 chr10 26837657 26837924 -113478841 - L1ME4a LINE L1 -248 5873 5574 603 286 28 11 chr10 26838231 26838409 -113478356 + MIR SINE MIR 37 217 -45 751 229 57 17 chr10 26840407 26840582 -113476183 - MER20 DNA MER1_type 0 219 38 1730 179 10 3 chr10 26841189 26841486 -113475279 + AluJb SINE Alu 1 299 -13 286 245 107 68 chr10 26841543 26841691 -113475074 + MIR SINE MIR 36 186 -63 233 342 13 0 chr10 26842038 26842117 -113474648 - L3 LINE CR1 -120 1457 1378 636 254 68 0 chr10 26843150 26843327 -113473438 + MIR SINE MIR 74 262 0 336 175 0 0 chr10 26843569 26843632 -113473133 + (TG)n Simple_repeat Simple_repeat 1 63 0 474 193 0 48 chr10 26844046 26844233 -113472532 + (TG)n Simple_repeat Simple_repeat 1 178 0 787 124 5 38 chr10 26844253 26844438 -113472327 + (TG)n Simple_repeat Simple_repeat 2 180 0 2108 136 0 0 chr10 26845289 26845597 -113471168 - AluSx SINE Alu -4 308 1 1896 146 3 23 chr10 26846835 26847136 -113469629 + AluJo SINE Alu 5 299 -13 2235 100 0 10 chr10 26847144 26847445 -113469320 + AluSx SINE Alu 1 298 -14 384 264 65 68 chr10 26847456 26847738 -113469027 + L1MB8 LINE L1 637 1122 -6341 273 304 39 20 chr10 26848088 26848190 -113468575 + L1MB8 LINE L1 1704 1807 -5656 2078 232 60 30 chr10 26848214 26848267 -113468498 + L1MB8 LINE L1 3407 3457 -4128 1870 122 0 0 chr10 26848267 26848521 -113468244 + AluSq SINE Alu 49 302 -11 2078 232 60 30 chr10 26848521 26848723 -113468042 + L1MB8 LINE L1 3457 3652 -3933 2222 114 0 3 chr10 26848723 26849022 -113467743 + AluSx SINE Alu 13 310 -2 2078 232 60 30 chr10 26849022 26850011 -113466754 + L1MB8 LINE L1 3652 7186 -399 482 235 116 39 chr10 26850016 26850237 -113466528 + L1MB8 LINE L1 7324 7578 -18 246 32 0 0 chr10 26850237 26850268 -113466497 + (TG)n Simple_repeat Simple_repeat 2 32 0 827 156 16 8 chr10 26850268 26850396 -113466369 - AluJb SINE Alu -28 284 156 24 0 0 0 chr10 26850745 26850769 -113465996 + AT_rich Low_complexity Low_complexity 1 24 0 441 0 0 0 chr10 26851271 26851320 -113465445 + (TG)n Simple_repeat Simple_repeat 2 50 0 496 259 26 0 chr10 26852447 26852563 -113464202 + MER45A DNA AcHobo 58 176 -2 1159 173 5 36 chr10 26852713 26852933 -113463832 + AluJo SINE Alu 81 293 -19 295 176 0 27 chr10 26852933 26853007 -113463758 + GA-rich Low_complexity Low_complexity 3 74 0 192 77 0 0 chr10 26853020 26853046 -113463719 + (GAAAA)n Simple_repeat Simple_repeat 5 30 0 21 0 0 0 chr10 26854427 26854448 -113462317 + AT_rich Low_complexity Low_complexity 1 21 0 379 235 0 31 chr10 26854455 26854553 -113462212 + L1MA10 LINE L1 6240 6334 0 1268 199 8 4 chr10 26854640 26854876 -113461889 + AluJb SINE Alu 49 285 -27 297 211 79 13 chr10 26855033 26855109 -113461656 + MIR SINE MIR 103 183 -79 2278 68 0 0 chr10 26855586 26855904 -113460861 - AluY SINE Alu 0 318 1 224 95 48 16 chr10 26856138 26856201 -113460564 + (TA)n Simple_repeat Simple_repeat 1 65 0 5525 34 8 0 chr10 26856819 26857436 -113459329 + L1PA4 LINE L1 5531 6152 -3 242 317 250 0 chr10 26857601 26857765 -113459000 + L3 LINE CR1 400 604 -973 2689 118 17 0 chr10 26857786 26858142 -113458623 + THE1B LTR MaLR 1 362 -2 3280 95 0 0 chr10 26858144 26858574 -113458191 + THE1B-int LTR MaLR 1 430 -1150 6493 20 0 0 chr10 26858614 26859310 -113457455 - L1PA3 LINE L1 0 6155 5460 236 233 14 0 chr10 26859450 26859523 -113457242 + GA-rich Low_complexity Low_complexity 3 76 0 229 292 0 5 chr10 26860289 26860419 -113456346 + MIR SINE MIR 53 236 -26 847 152 0 0 chr10 26860592 26860717 -113456048 - FLAM_C SINE Alu -18 125 1 1191 274 87 19 chr10 26860963 26861342 -113455423 - MLT1I LTR MaLR -4 405 1 501 267 124 40 chr10 26861345 26861570 -113455195 + L2 LINE L2 3020 3263 -50 3083 135 45 97 chr10 26861687 26862347 -113454418 - LTR1 LTR ERV1 0 785 160 1935 125 11 21 chr10 26862628 26862915 -113453850 - AluSx SINE Alu -26 286 3 351 242 21 21 chr10 26864339 26864434 -113452331 + L2 LINE L2 3167 3261 -11 205 162 0 0 chr10 26864440 26864477 -113452288 + (CAGG)n Simple_repeat Simple_repeat 2 38 0 591 15 0 0 chr10 26865001 26865069 -113451696 + (TA)n Simple_repeat Simple_repeat 2 69 0 30 69 0 0 chr10 26865246 26865304 -113451461 + AT_rich Low_complexity Low_complexity 1 58 0 1032 133 0 0 chr10 26865306 26865486 -113451279 + (TA)n Simple_repeat Simple_repeat 1 180 0 2017 143 0 10 chr10 26865496 26865790 -113450975 - AluSx SINE Alu -21 291 1 241 277 213 0 chr10 26865820 26865914 -113450851 - L2 LINE L2 -1 3312 3199 230 158 0 0 chr10 26866055 26866093 -113450672 - LTR33 LTR ERVL -4 517 480 523 140 21 11 chr10 26866112 26866205 -113450560 - AluJ/FRAM SINE Alu 0 312 219 842 130 0 15 chr10 26866229 26866360 -113450405 - FLAM_C SINE Alu 0 143 15 591 246 34 29 chr10 26866367 26866542 -113450223 - LTR33 LTR ERVL -51 470 295 1915 102 4 0 chr10 26866966 26867220 -113449545 - AluSq SINE Alu -58 255 1 251 307 0 40 chr10 26867326 26867401 -113449364 + L2 LINE L2 3203 3274 -39 882 204 11 34 chr10 26867463 26867639 -113449126 + FRAM SINE Alu 1 172 -4 1944 152 0 20 chr10 26868500 26868802 -113447963 - AluJo SINE Alu -16 296 1 275 319 0 0 chr10 26869664 26869736 -113447029 + L2 LINE L2 3234 3305 -8 242 336 89 53 chr10 26870545 26870639 -113446126 + L2 LINE L2 2826 2915 -357 2153 111 3 7 chr10 26870639 26870945 -113445820 - AluSc SINE Alu -4 305 1 1710 171 17 14 chr10 26870945 26871238 -113445527 - AluJo SINE Alu -18 294 1 242 336 89 53 chr10 26871238 26871558 -113445207 + L2 LINE L2 2914 3256 -16 846 125 8 16 chr10 26872173 26872301 -113444464 - FLAM_C SINE Alu -2 131 5 1969 131 34 0 chr10 26872656 26872954 -113443811 - AluSx SINE Alu -4 308 1 2717 126 41 7 chr10 26873030 26873444 -113443321 + MSTA LTR MaLR 1 428 0 346 323 31 8 chr10 26873776 26873906 -113442859 - L3 LINE CR1 -7 1570 1438 889 123 7 45 chr10 26873908 26874062 -113442703 + LTR39 LTR ERV1 3 150 -633 304 107 107 0 chr10 26874070 26874126 -113442639 + L1PA10 LINE L1 6106 6167 -1 3127 181 36 34 chr10 26874179 26874528 -113442237 + LTR39 LTR ERV1 143 495 -288 2152 109 10 0 chr10 26874528 26874822 -113441943 + AluSq SINE Alu 1 297 -16 3127 181 36 34 chr10 26874822 26875112 -113441653 + LTR39 LTR ERV1 495 783 0 2029 134 3 10 chr10 26875299 26875589 -113441176 + AluSx SINE Alu 3 290 -22 1413 148 27 0 chr10 26877090 26877313 -113439452 + AluJo SINE Alu 1 229 -83 349 257 182 7 chr10 26877508 26877656 -113439109 + L2 LINE L2 3140 3313 0 223 287 191 7 chr10 26877757 26877893 -113438872 + L3 LINE CR1 1310 1470 -107 1953 120 16 35 chr10 26879811 26880127 -113436638 + AluSx SINE Alu 1 310 -2 255 329 0 0 chr10 26881238 26881320 -113435445 + (TG)n Simple_repeat Simple_repeat 2 83 0 241 286 34 122 chr10 26881418 26881744 -113435021 + L3 LINE CR1 1192 1540 -37 2242 113 7 0 chr10 26882206 26882508 -113434257 - AluSx SINE Alu -8 304 1 271 295 225 0 chr10 26882523 26882652 -113434113 - MIR SINE MIR -56 206 49 574 259 30 8 chr10 26883285 26883416 -113433349 + MIR SINE MIR 21 154 -108 233 214 0 0 chr10 26883470 26883512 -113433253 + (ATG)n Simple_repeat Simple_repeat 1 42 0 198 0 0 0 chr10 26883930 26883952 -113432813 + (T)n Simple_repeat Simple_repeat 1 22 0 335 325 22 51 chr10 26884368 26884523 -113432242 + MIR SINE MIR 4 151 -103 1750 168 28 0 chr10 26884523 26884814 -113431951 + AluJo SINE Alu 1 299 -13 335 325 22 51 chr10 26884814 26884855 -113431910 + MIR SINE MIR 151 192 -62 1007 64 6 19 chr10 26884894 26885050 -113431715 + (GAAA)n Simple_repeat Simple_repeat 2 155 0 2276 107 0 3 chr10 26885060 26885359 -113431406 - AluSq SINE Alu -15 298 1 254 196 0 0 chr10 26885391 26885437 -113431328 + L1ME4a LINE L1 6073 6118 -3 23 0 0 0 chr10 26885637 26885660 -113431105 + AT_rich Low_complexity Low_complexity 1 23 0 395 300 0 8 chr10 26885699 26885829 -113430936 + L1ME LINE L1 5657 5785 -336 2300 151 25 3 chr10 26885947 26886339 -113430426 + L1MA7 LINE L1 5891 6291 0 2156 112 31 0 chr10 26886433 26886727 -113430038 + AluSq SINE Alu 5 307 -6 1554 141 51 33 chr10 26886727 26887002 -113429763 - AluJo SINE Alu -31 281 1 23 0 0 0 chr10 26887099 26887122 -113429643 + AT_rich Low_complexity Low_complexity 1 23 0 2671 128 31 0 chr10 26887744 26888157 -113428608 + MSTA LTR MaLR 1 426 -2 2564 101 20 0 chr10 26888852 26889209 -113427556 + THE1B LTR MaLR 1 364 0 2473 127 61 20 chr10 26889229 26889638 -113427127 + MSTB LTR MaLR 1 426 0 22 0 0 0 chr10 26889665 26889687 -113427078 + AT_rich Low_complexity Low_complexity 1 22 0 2312 105 14 0 chr10 26889696 26889992 -113426773 - AluSx SINE Alu -12 300 1 320 282 0 0 chr10 26890164 26890242 -113426523 + L2 LINE L2 3222 3299 -14 653 268 110 13 chr10 26890274 26890502 -113426263 - MIR SINE MIR -8 254 5 578 257 57 23 chr10 26892828 26893003 -113423762 - MIR SINE MIR -51 211 31 789 316 18 34 chr10 26894252 26894695 -113422070 + L1ME LINE L1 10 445 -5625 1920 158 0 0 chr10 26894805 26895111 -113421654 + AluJo SINE Alu 5 310 0 913 308 53 31 chr10 26895207 26896025 -113420740 + L1ME LINE L1 525 1360 -4901 22 0 0 0 chr10 26896098 26896120 -113420645 + AT_rich Low_complexity Low_complexity 1 22 0 533 291 76 0 chr10 26896402 26896612 -113420153 - L1MC4 LINE L1 -178 7864 7639 765 182 44 19 chr10 26896631 26896790 -113419975 - FRAM SINE Alu -13 163 1 2035 96 0 22 chr10 26896903 26897174 -113419591 + AluSq SINE Alu 1 265 -48 1595 219 63 34 chr10 26897194 26897701 -113419064 - L1MC4 LINE L1 0 8042 7521 1358 242 34 49 chr10 26897699 26898286 -113418479 + L1MDa LINE L1 1259 1836 -4704 * 405 311 80 0 chr10 26898311 26898597 -113418168 + L1ME4a LINE L1 5589 5897 -224 2319 54 13 10 chr10 26898828 26899126 -113417639 + AluY SINE Alu 1 299 -12 952 263 86 42 chr10 26899142 26899547 -113417218 + MLT1H LTR MaLR 1 386 -169 655 11 122 0 chr10 26899547 26899637 -113417128 - L1PA5 LINE L1 0 6154 6054 952 263 86 42 chr10 26899637 26899815 -113416950 + MLT1H LTR MaLR 386 555 0 1889 141 3 7 chr10 26899910 26900200 -113416565 - AluJb SINE Alu -23 289 1 313 301 201 24 chr10 26902084 26902333 -113414432 + L2 LINE L2 2476 2768 -546 2123 128 45 31 chr10 26903030 26903389 -113413376 - THE1B LTR MaLR 0 364 1 2253 118 0 0 chr10 26903925 26904222 -113412543 - AluSp SINE Alu -13 300 4 491 224 109 0 chr10 26904945 26905110 -113411655 + MER63 DNA MER1_type 112 294 -767 409 62 31 0 chr10 26905232 26905297 -113411468 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 207 100 0 0 chr10 26905296 26905326 -113411439 + (CATA)n Simple_repeat Simple_repeat 4 33 0 * 275 255 117 7 chr10 26905549 26905694 -113411071 + MER103 DNA DNA 3 163 -3 1663 161 62 0 chr10 26905694 26905985 -113410780 - AluJo SINE Alu -3 309 1 412 292 41 23 chr10 26906112 26906283 -113410482 - LTR67 LTR ERVL 0 557 384 840 286 103 81 chr10 26906294 26907150 -113409615 + HAL1 LINE L1 62 950 -1557 744 206 0 0 chr10 26907150 26907281 -113409484 + FLAM_C SINE Alu 2 132 -1 840 286 103 81 chr10 26907281 26907540 -113409225 + HAL1 LINE L1 950 1202 -1305 403 229 136 0 chr10 26907541 26907659 -113409106 - MLT1H LTR MaLR 0 555 422 522 275 40 7 chr10 26907793 26907942 -113408823 - MLT1H LTR MaLR -321 228 75 2100 134 7 0 chr10 26907987 26908286 -113408479 - AluSx SINE Alu -11 301 1 1374 242 48 88 chr10 26908322 26909094 -113407671 + HAL1 LINE L1 1200 1940 -567 405 291 85 0 chr10 26910036 26910235 -113406530 + L1ME3A LINE L1 5742 5957 -213 464 348 103 32 chr10 26910415 26910921 -113405844 - L2 LINE L2 -1482 1832 1291 237 326 21 57 chr10 26910948 26911089 -113405676 + L2 LINE L2 2925 3060 -212 1627 121 158 4 chr10 26911251 26911516 -113405249 - AluSx SINE Alu -6 306 1 1226 102 0 6 chr10 26911568 26911734 -113405031 - AluSp SINE Alu -14 299 135 2062 119 0 10 chr10 26911735 26912045 -113404720 - AluSx SINE Alu 0 312 6 23 54 0 0 chr10 26912261 26912298 -113404467 + AT_rich Low_complexity Low_complexity 1 37 0 1727 144 0 0 chr10 26912944 26913187 -113403578 + AluSx SINE Alu 1 243 -69 1702 141 99 0 chr10 26918366 26918628 -113398137 - AluJb SINE Alu -14 298 11 216 130 0 0 chr10 26918839 26918885 -113397880 + (TA)n Simple_repeat Simple_repeat 2 47 0 282 339 141 17 chr10 26919125 26919423 -113397342 + L3 LINE CR1 371 705 -872 808 154 28 0 chr10 26919443 26919586 -113397179 + MER2 DNA MER2_type 55 201 -144 1784 147 0 4 chr10 26919634 26919906 -113396859 - AluJb SINE Alu -15 297 27 180 0 0 0 chr10 26920223 26920243 -113396522 + (A)n Simple_repeat Simple_repeat 1 20 0 751 229 18 70 chr10 26920306 26920533 -113396232 + MER58A DNA MER1_type 10 224 0 23 33 0 0 chr10 26923121 26923151 -113393614 + AT_rich Low_complexity Low_complexity 1 30 0 235 301 68 0 chr10 26923953 26924026 -113392739 + MIR3 SINE MIR 124 201 -7 202 351 0 0 chr10 26924406 26924463 -113392302 - L2 LINE L2 -1 3271 3215 544 263 239 70 chr10 26924883 26924936 -113391829 - L3 LINE CR1 -392 1185 1142 2123 121 3 7 chr10 26924936 26925243 -113391522 - AluSq SINE Alu -7 306 1 544 263 239 70 chr10 26925243 26925646 -113391119 - L3 LINE CR1 -435 1142 652 2591 101 8 16 chr10 26925652 26926019 -113390746 - THE1B LTR MaLR 0 364 1 7575 114 15 3 chr10 26926019 26927160 -113389605 - THE1B-int LTR MaLR 0 1580 427 2180 39 0 0 chr10 26927169 26927450 -113389315 - L1P LINE L1 -1004 5142 4862 809 20 20 0 chr10 26927450 26927552 -113389213 + L1P LINE L1 5144 5247 -899 201 352 116 36 chr10 26927907 26928208 -113388557 + L3b LINE CR1 1109 1433 -150 189 0 0 0 chr10 26928483 26928504 -113388261 + (T)n Simple_repeat Simple_repeat 1 21 0 200 199 0 4 chr10 26928973 26929017 -113387748 + MIR SINE MIR 114 157 -51 1143 120 0 24 chr10 26929133 26929300 -113387465 - AluSg/x SINE Alu -11 299 137 414 241 52 108 chr10 26929359 26929571 -113387194 - MIR SINE MIR 0 262 63 2286 138 96 5 chr10 26929763 26930189 -113386576 + MER4C LTR ERV1 1 465 0 366 215 176 71 chr10 26930283 26930541 -113386224 + LTR16A1 LTR ERVL 82 386 -71 2095 137 3 0 chr10 26930541 26930840 -113385925 - AluSx SINE Alu -12 300 1 366 215 176 71 chr10 26930840 26930921 -113385844 + LTR16A1 LTR ERVL 386 457 0 1737 152 118 0 chr10 26931208 26931531 -113385234 - MER46B DNA MER2_type 0 236 1 264 30 0 0 chr10 26931947 26931980 -113384785 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 23 33 0 0 chr10 26932704 26932734 -113384031 + AT_rich Low_complexity Low_complexity 1 30 0 447 229 91 14 chr10 26932839 26933049 -113383716 - L1ME4a LINE L1 -190 5931 5706 1778 194 0 0 chr10 26933082 26933381 -113383384 - AluJb SINE Alu -13 299 1 490 184 20 116 chr10 26933440 26933587 -113383178 + FLAM_A SINE Alu 1 133 0 1511 148 151 42 chr10 26934556 26934913 -113381852 - MSTD LTR MaLR 0 396 1 302 340 0 10 chr10 26935152 26935252 -113381513 + MIR3 SINE MIR 89 187 -21 326 280 144 15 chr10 26936868 26937000 -113379765 + MER115 DNA AcHobo 18 166 -527 810 239 17 6 chr10 26937000 26937180 -113379585 + MER5A DNA MER1_type 3 184 -5 366 245 21 11 chr10 26937189 26937283 -113379482 + MER115 DNA AcHobo 159 253 -440 622 213 65 7 chr10 26937390 26937545 -113379220 + MER115 DNA AcHobo 530 693 0 282 116 0 0 chr10 26937560 26937603 -113379162 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 1236 186 82 28 chr10 26937605 26937960 -113378805 - L1M4b LINE L1 -5248 1611 1238 767 230 138 0 chr10 26937982 26938199 -113378566 - L1M4b LINE L1 -6602 257 11 21 0 0 0 chr10 26938208 26938229 -113378536 + AT_rich Low_complexity Low_complexity 1 21 0 2104 121 7 0 chr10 26938235 26938516 -113378249 + AluSx SINE Alu 1 316 0 211 91 0 0 chr10 26938516 26938549 -113378216 + (CAAA)n Simple_repeat Simple_repeat 2 152 0 431 273 0 0 chr10 26938552 26938629 -113378136 - L2 LINE L2 -22 3250 3174 1910 135 16 29 chr10 26939387 26939699 -113377066 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr10 26940142 26940163 -113376602 + AT_rich Low_complexity Low_complexity 1 21 0 700 301 19 120 chr10 26940275 26940354 -113376411 - L2 LINE L2 -1 3271 3186 2150 118 0 7 chr10 26940354 26940651 -113376114 + AluSx SINE Alu 1 295 -17 700 301 19 120 chr10 26940651 26940996 -113375769 - L2 LINE L2 -86 3186 2890 988 163 0 0 chr10 26941375 26941522 -113375243 + FRAM SINE Alu 1 147 -19 20078 151 31 15 chr10 26941574 26942123 -113374642 - L1MA2 LINE L1 0 7723 7184 2283 91 3 3 chr10 26942123 26942430 -113374335 - AluSg SINE Alu -3 307 1 20078 151 31 15 chr10 26942430 26944396 -113372369 - L1MA2 LINE L1 -539 7184 5251 1996 149 0 0 chr10 26944396 26944678 -113372087 - AluJb SINE Alu -30 282 1 20078 151 31 15 chr10 26944678 26946050 -113370715 - L1MA2 LINE L1 -2472 5251 3903 1828 205 0 0 chr10 26946050 26946362 -113370403 - AluJb SINE Alu 0 312 1 20078 151 31 15 chr10 26946362 26950063 -113366702 - L1MA2 LINE L1 -3820 3903 12 230 294 0 0 chr10 26950632 26950683 -113366082 + polypurine Low_complexity Low_complexity 1 51 0 1964 158 6 13 chr10 26950939 26951250 -113365515 + AluJo SINE Alu 1 309 -3 245 252 78 0 chr10 26951473 26951576 -113365189 - MER97b DNA MER1_type? -194 859 749 954 73 32 0 chr10 26951580 26951735 -113365030 + AluSc SINE Alu 156 314 0 307 141 52 104 chr10 26951735 26951870 -113364895 - MER97a DNA MER1_type? -169 725 598 5444 115 21 14 chr10 26951891 26952781 -113363984 - L1PB3 LINE L1 -4 6150 5254 2153 223 51 22 chr10 26952798 26952823 -113363942 - MER97b DNA MER1_type? -445 608 585 1483 179 4 11 chr10 26952823 26953097 -113363668 + AluJo SINE Alu 11 282 -30 194 79 0 26 chr10 26953100 26953138 -113363627 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 2153 223 51 22 chr10 26953138 26953699 -113363066 - MER97b DNA MER1_type? -469 584 1 308 286 67 17 chr10 26955056 26955175 -113361590 + MIR3 SINE MIR 69 193 -15 1236 66 6 12 chr10 26955729 26955896 -113360869 + L1PA10 LINE L1 5994 6159 -9 1505 170 64 7 chr10 26956457 26956739 -113360026 - LTR32 LTR ERVL 0 471 174 2133 128 3 10 chr10 26956877 26957189 -113359576 + AluSx SINE Alu 1 310 -2 2175 142 0 0 chr10 26959853 26960195 -113356570 - AluSx SINE Alu 0 342 1 283 342 70 9 chr10 26960425 26960539 -113356226 - MIR SINE MIR -113 149 29 321 213 176 9 chr10 26960677 26960785 -113355980 + MER5B DNA MER1_type 46 171 -7 4381 175 52 13 chr10 26961221 26962090 -113354675 + MER4D LTR ERV1 1 903 0 1805 139 0 77 chr10 26962299 26962404 -113354361 + AluJb SINE Alu 1 112 -200 4124 107 24 6 chr10 26962404 26963028 -113353737 - MER41B LTR ERV1 0 635 1 1805 139 0 77 chr10 26963028 26963074 -113353691 + AluJb SINE Alu 112 160 -152 2162 111 3 7 chr10 26963074 26963380 -113353385 + AluSg SINE Alu 1 305 -5 1805 139 0 77 chr10 26963380 26963565 -113353200 + AluJb SINE Alu 160 312 0 1894 164 3 3 chr10 26963691 26964002 -113352763 - AluSx SINE Alu -1 311 1 1967 144 3 7 chr10 26964149 26964448 -113352317 + AluSx SINE Alu 1 298 -14 1690 166 26 29 chr10 26964660 26964967 -113351798 - AluJo SINE Alu -6 306 1 331 224 0 0 chr10 26965286 26965353 -113351412 + MIR SINE MIR 89 155 -107 877 267 32 4 chr10 26965451 26965702 -113351063 - MIR SINE MIR -2 260 3 994 217 75 5 chr10 26967028 26967240 -113349525 - MIR SINE MIR 0 262 36 2191 122 3 0 chr10 26967507 26967811 -113348954 - AluSx SINE Alu -7 305 1 187 203 31 16 chr10 26968039 26968103 -113348662 + CT-rich Low_complexity Low_complexity 3 67 0 7896 13 0 0 chr10 26968226 26969501 -113347264 + L1PA2 LINE L1 4879 6155 0 2287 110 0 3 chr10 26975094 26975404 -113341361 + AluSx SINE Alu 1 309 -3 771 107 42 0 chr10 26975404 26975621 -113341144 + GA-rich Low_complexity Low_complexity 1 226 0 474 18 0 0 chr10 26975623 26975678 -113341087 + (GAAA)n Simple_repeat Simple_repeat 2 56 0 2012 113 36 0 chr10 26976302 26976577 -113340188 - AluSx SINE Alu -27 285 1 188 390 25 25 chr10 26976789 26976907 -113339858 + L2 LINE L2 3137 3254 -18 1983 135 0 23 chr10 26977181 26977485 -113339280 - AluSx SINE Alu -15 297 1 197 181 29 67 chr10 26978714 26978819 -113337946 + A-rich Low_complexity Low_complexity 2 102 0 189 147 0 0 chr10 26978851 26978885 -113337880 + (GGGA)n Simple_repeat Simple_repeat 1 34 0 299 256 70 0 chr10 26979783 26979869 -113336896 + MIR SINE MIR 98 189 -73 261 331 71 52 chr10 26980109 26980263 -113336502 - L2 LINE L2 -254 3018 2862 2447 77 0 10 chr10 26980269 26980580 -113336185 - AluY SINE Alu -3 308 1 251 322 61 26 chr10 26980606 26980721 -113336044 - L2 LINE L2 -13 3300 3182 389 313 42 0 chr10 26981164 26981260 -113335505 - L2 LINE L2 -57 3215 3116 2380 96 0 0 chr10 26981326 26981628 -113335137 + AluY SINE Alu 1 302 -9 184 260 100 0 chr10 26981663 26981713 -113335052 - MIR SINE MIR -112 150 96 312 194 43 115 chr10 26981845 26981984 -113334781 + L1MA9 LINE L1 6122 6250 -62 2295 174 42 10 chr10 26983184 26983684 -113333081 - Charlie1b DNA MER1_type -7 516 1 247 368 120 0 chr10 26984057 26984174 -113332591 + L3b LINE CR1 1398 1528 -55 1063 329 94 50 chr10 26986465 26987378 -113329387 - L3 LINE CR1 -80 1497 545 446 294 165 7 chr10 26987644 26987846 -113328919 + MIR SINE MIR 10 241 -21 2266 96 0 13 chr10 26988270 26988572 -113328193 - AluY SINE Alu -13 298 1 448 297 86 36 chr10 26988775 26988997 -113327768 - L1ME4a LINE L1 -230 5891 5659 32 43 0 0 chr10 26988965 26989011 -113327754 + AT_rich Low_complexity Low_complexity 1 46 0 * 1389 150 0 10 chr10 26989037 26989244 -113327521 - AluJo SINE Alu -21 291 87 256 191 0 0 chr10 26989628 26989670 -113327095 + L2 LINE L2 3184 3225 -47 240 241 0 0 chr10 26990386 26990440 -113326325 + L3 LINE CR1 1215 1268 -309 600 219 60 13 chr10 26991014 26991165 -113325600 + MER3 DNA MER1_type 48 205 -4 647 279 55 45 chr10 26991681 26991989 -113324776 + Charlie7 DNA MER1_type 54 364 -2248 * 2278 226 139 34 chr10 26991984 26993005 -113323760 + Charlie7 DNA MER1_type 1474 2601 -11 25 51 0 0 chr10 26993071 26993110 -113323655 + AT_rich Low_complexity Low_complexity 1 39 0 325 163 272 0 chr10 26996449 26996541 -113320224 + L2 LINE L2 3196 3312 -1 21 0 0 0 chr10 26997386 26997407 -113319358 + AT_rich Low_complexity Low_complexity 1 21 0 544 297 64 39 chr10 26998279 26998562 -113318203 - L2 LINE L2 -1 3312 3023 326 189 95 0 chr10 26999791 26999865 -113316900 - MER69 DNA AcHobo -7 2519 2439 * 1087 291 123 5 chr10 26999862 27000261 -113316504 - MER69 DNA AcHobo -2055 471 26 245 272 170 14 chr10 27001254 27001401 -113315364 + MLT1-int LTR MaLR 290 459 -912 2125 106 14 0 chr10 27001478 27001761 -113315004 - AluSx SINE Alu -25 287 1 2548 152 8 15 chr10 27001771 27002244 -113314521 - L1MB2 LINE L1 -2 6169 5700 973 216 67 24 chr10 27002318 27002350 -113314415 + L1MD3 LINE L1 7713 7742 -253 2277 139 32 5 chr10 27002350 27002730 -113314035 - MLT1B LTR MaLR 0 390 1 973 216 67 24 chr10 27002730 27002952 -113313813 + L1MD3 LINE L1 7742 7978 -17 2408 69 0 0 chr10 27003020 27003311 -113313454 + AluY SINE Alu 1 291 -20 256 250 144 28 chr10 27003518 27003698 -113313067 + L1ME4a LINE L1 3438 3638 -2508 864 279 143 48 chr10 27003900 27004387 -113312378 + L1ME4a LINE L1 3870 4309 -1917 2242 100 10 0 chr10 27004387 27004686 -113312079 + AluSq SINE Alu 4 305 -8 864 279 143 48 chr10 27004686 27004795 -113311970 + L1ME4a LINE L1 4309 4406 -1820 2247 140 109 0 chr10 27004795 27005181 -113311584 + MSTA LTR MaLR 1 428 0 864 279 143 48 chr10 27005181 27005643 -113311122 + L1ME4a LINE L1 4406 4823 -1403 1428 162 57 153 chr10 27005643 27006081 -113310684 + MSTD LTR MaLR 1 396 0 864 279 143 48 chr10 27006081 27006160 -113310605 + L1ME4a LINE L1 4823 4893 -1333 2289 99 0 0 chr10 27006160 27006462 -113310303 - AluSc SINE Alu -7 302 1 864 279 143 48 chr10 27006462 27006997 -113309768 + L1ME4a LINE L1 4893 5707 -519 21 0 0 0 chr10 27007654 27007675 -113309090 + AT_rich Low_complexity Low_complexity 1 21 0 2311 96 3 22 chr10 27008161 27008475 -113308290 + AluSg SINE Alu 1 308 -2 423 0 0 0 chr10 27008708 27008755 -113308010 + (CA)n Simple_repeat Simple_repeat 2 48 0 2173 147 0 12 chr10 27009590 27009930 -113306835 + MER1B DNA MER1_type 1 336 -1 1356 210 83 35 chr10 27010039 27010462 -113306303 + LTR40c LTR ERVL 1 443 -22 242 222 104 52 chr10 27010726 27010861 -113305904 + L1ME4a LINE L1 5978 6119 -2 2528 47 3 7 chr10 27011027 27011325 -113305440 + AluY SINE Alu 1 297 -14 2196 214 16 87 chr10 27011345 27012081 -113304684 + L1PA15 LINE L1 2612 3282 -2864 2225 123 33 36 chr10 27012081 27012446 -113304319 - THE1B LTR MaLR 0 364 1 2196 214 16 87 chr10 27012446 27012545 -113304220 + L1PA15 LINE L1 3282 3387 -2759 13486 52 2 3 chr10 27012560 27015055 -113301710 + L1PA5 LINE L1 3652 6147 -7 8920 174 18 38 chr10 27015047 27017454 -113299311 + L1PA15 LINE L1 3387 5786 -379 * 1644 136 86 44 chr10 27017454 27017814 -113298951 - THE1C LTR MaLR 0 375 1 8920 174 18 38 chr10 27017814 27018187 -113298578 + L1PA15 LINE L1 5786 6165 0 382 300 55 61 chr10 27020774 27021067 -113295698 + HAL1 LINE L1 811 1101 -1406 978 279 142 22 chr10 27021090 27021759 -113295006 + HAL1 LINE L1 1169 1917 -590 2157 126 3 3 chr10 27021808 27022118 -113294647 + AluSx SINE Alu 1 310 -2 2109 125 0 0 chr10 27022769 27023057 -113293708 - AluSx SINE Alu -24 288 1 943 276 54 43 chr10 27023765 27024210 -113292555 + L2 LINE L2 2827 3276 -37 1507 134 127 14 chr10 27024218 27024494 -113292271 - MER47A DNA MER2_type 0 366 60 256 28 0 0 chr10 27024541 27024577 -113292188 - L1PA2 LINE L1 -5 6150 6115 240 250 0 0 chr10 27024577 27024629 -113292136 - MER47A DNA MER2_type -308 58 7 542 309 81 13 chr10 27024639 27024875 -113291890 - MIR SINE MIR -10 252 1 1998 156 16 24 chr10 27024910 27025288 -113291477 - THE1C LTR MaLR 0 375 1 247 389 54 6 chr10 27025745 27025912 -113290853 + MER5A DNA MER1_type 8 182 -7 313 234 85 11 chr10 27026022 27026116 -113290649 + MIR3 SINE MIR 100 200 -8 1856 161 7 0 chr10 27026683 27026987 -113289778 + AluJb SINE Alu 1 306 0 399 41 0 0 chr10 27027430 27027479 -113289286 + (CA)n Simple_repeat Simple_repeat 2 50 0 14330 42 1 7 chr10 27027516 27030049 -113286716 - L1PA5 LINE L1 -3 6151 3633 2447 72 0 3 chr10 27030049 27030353 -113286412 + AluY SINE Alu 1 303 -8 14330 42 1 7 chr10 27030353 27030377 -113286388 - L1PA5 LINE L1 -2521 3633 3610 8563 44 3 1 chr10 27030377 27031460 -113285305 - L1PA5 LINE L1 -2445 3701 2617 258 30 0 0 chr10 27031459 27031492 -113285273 + L1PA5 LINE L1 2578 2610 -3536 * 2230 64 50 0 chr10 27031492 27031772 -113284993 - AluY SINE Alu -17 294 1 232 312 11 11 chr10 27032008 27032101 -113284664 + (CATATA)n Simple_repeat Simple_repeat 4 96 0 1173 194 9 0 chr10 27032171 27032388 -113284377 + MER20 DNA MER1_type 1 219 0 914 178 32 42 chr10 27032869 27033124 -113283641 + AluJo SINE Alu 2 304 -8 693 205 35 6 chr10 27033256 27033427 -113283338 - MER104 DNA MER2_type -1 179 4 1832 174 0 0 chr10 27035296 27035594 -113281171 + AluJb SINE Alu 1 298 -14 346 115 0 0 chr10 27035696 27035748 -113281017 + Alu SINE Alu 250 301 -1 349 360 23 0 chr10 27035798 27035946 -113280819 - MIR3 SINE MIR -41 167 15 228 286 200 9 chr10 27036752 27036857 -113279908 - MIR3 SINE MIR -40 168 44 309 319 265 15 chr10 27037023 27037227 -113279538 + MIR SINE MIR 2 256 -6 * 336 326 30 30 chr10 27037222 27037357 -113279408 + MIR3 SINE MIR 50 184 -24 22 80 0 0 chr10 27037966 27038016 -113278749 + AT_rich Low_complexity Low_complexity 1 50 0 239 366 79 10 chr10 27038556 27038657 -113278108 + MIR SINE MIR 33 116 -92 845 270 5 5 chr10 27039198 27039398 -113277367 + MIR SINE MIR 49 248 -14 545 245 41 20 chr10 27039756 27039903 -113276862 - MIR3 SINE MIR -25 183 34 22 0 0 0 chr10 27039970 27039992 -113276773 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr10 27042860 27042888 -113273877 + GC_rich Low_complexity Low_complexity 1 28 0 574 240 0 8 chr10 27043869 27043994 -113272771 + L2 LINE L2 3190 3313 0 238 346 10 50 chr10 27044518 27044619 -113272146 + MIR SINE MIR 28 124 -84 1475 148 25 44 chr10 27044833 27045150 -113271615 - MER33 DNA MER1_type 0 324 14 186 71 0 0 chr10 27045370 27045398 -113271367 + (CA)n Simple_repeat Simple_repeat 2 29 0 693 252 78 71 chr10 27045444 27045753 -113271012 - L2 LINE L2 0 3313 3003 285 333 56 40 chr10 27046468 27046594 -113270171 + MIR SINE MIR 20 147 -61 290 234 186 10 chr10 27046976 27047080 -113269685 - MER5A DNA MER1_type -72 106 1 180 0 0 0 chr10 27047141 27047161 -113269604 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 471 278 86 6 chr10 27047239 27047401 -113269364 - MIR SINE MIR -11 251 77 892 215 32 16 chr10 27047431 27047617 -113269148 - MER5A DNA MER1_type 0 189 1 4159 119 35 30 chr10 27048625 27049262 -113267503 - MER51C LTR ERV1 0 640 1 2650 121 35 42 chr10 27049373 27049729 -113267036 + L1MA8 LINE L1 5838 6192 -99 1906 159 0 3 chr10 27049729 27050018 -113266747 + AluSx SINE Alu 9 296 -16 2650 121 35 42 chr10 27050018 27050115 -113266650 + L1MA8 LINE L1 6192 6288 -3 796 207 0 0 chr10 27050269 27050409 -113266356 - FLAM_C SINE Alu -2 141 2 402 147 0 0 chr10 27050736 27050804 -113265961 + (TCC)n Simple_repeat Simple_repeat 3 70 0 752 233 0 0 chr10 27051451 27051584 -113265181 + FLAM_A SINE Alu 1 133 0 234 0 0 0 chr10 27051976 27052002 -113264763 + (T)n Simple_repeat Simple_repeat 1 26 0 2455 224 17 82 chr10 27052194 27052835 -113263930 + L1ME1 LINE L1 5334 6015 -151 2444 67 3 16 chr10 27052835 27053150 -113263615 + AluY SINE Alu 1 311 0 2455 224 17 82 chr10 27053150 27053166 -113263599 + L1ME1 LINE L1 6015 6030 -136 2430 97 0 0 chr10 27053166 27053475 -113263290 + AluSg SINE Alu 1 309 -1 2455 224 17 82 chr10 27053475 27053608 -113263157 + L1ME1 LINE L1 6030 6089 -77 4277 66 193 2 chr10 27053608 27054184 -113262581 + LTR12 LTR ERV1 3 688 0 2455 224 17 82 chr10 27054184 27054252 -113262513 + L1ME1 LINE L1 6089 6160 -6 2153 134 3 0 chr10 27054272 27054578 -113262187 - AluSx SINE Alu -5 307 1 249 281 0 0 chr10 27054797 27054854 -113261911 - L2 LINE L2 -1 3312 3256 627 270 169 41 chr10 27054894 27055499 -113261266 - L2 LINE L2 -48 3265 2545 3131 157 19 6 chr10 27055527 27056063 -113260702 + L1MA3 LINE L1 5762 6304 -1 1037 270 41 47 chr10 27056267 27056818 -113259947 + L1MB4 LINE L1 5279 5836 -344 22 0 0 0 chr10 27056950 27056972 -113259793 + AT_rich Low_complexity Low_complexity 1 22 0 182 174 22 0 chr10 27057047 27057093 -113259672 + GA-rich Low_complexity Low_complexity 4 50 0 195 42 0 0 chr10 27059390 27059414 -113257351 + (A)n Simple_repeat Simple_repeat 1 24 0 2174 126 0 10 chr10 27059818 27060119 -113256646 - AluSx SINE Alu -11 301 4 248 0 0 30 chr10 27060216 27060249 -113256516 + (TTTTTG)n Simple_repeat Simple_repeat 3 34 0 565 121 85 99 chr10 27060620 27060761 -113256004 + MER53 DNA DNA 1 139 -50 790 175 42 0 chr10 27060762 27060882 -113255883 + FLAM_C SINE Alu 2 126 -17 2037 109 21 14 chr10 27060977 27061262 -113255503 + AluSc SINE Alu 1 287 -22 268 261 0 0 chr10 27061269 27061334 -113255431 + MER53 DNA DNA 125 189 0 1666 197 7 14 chr10 27061440 27061734 -113255031 - AluJo SINE Alu -20 292 1 291 104 0 0 chr10 27061972 27062020 -113254745 + (TC)n Simple_repeat Simple_repeat 1 48 0 346 281 78 7 chr10 27062399 27062552 -113254213 + L1MC/D LINE L1 5620 5783 -2025 1270 297 70 30 chr10 27062581 27062876 -113253889 + L1ME LINE L1 4106 4388 -1758 2045 133 6 16 chr10 27062876 27063191 -113253574 + AluSx SINE Alu 1 312 0 1270 297 70 30 chr10 27063191 27063689 -113253076 + L1ME LINE L1 4388 4931 -1215 985 301 35 56 chr10 27063694 27064126 -113252639 + LTR16A LTR ERVL 28 450 0 955 250 117 25 chr10 27064133 27064749 -113252016 + L1ME LINE L1 4943 5630 -540 2217 176 3 16 chr10 27064749 27065119 -113251646 + MLT1A1 LTR MaLR 1 365 0 955 250 117 25 chr10 27065119 27065200 -113251565 + L1ME LINE L1 5630 5702 -468 572 224 85 76 chr10 27065218 27065266 -113251499 + L1M3 LINE L1 5614 5660 -520 2128 81 0 0 chr10 27065266 27065526 -113251239 - AluY SINE Alu -9 302 43 572 224 85 76 chr10 27065526 27065690 -113251075 + L1M3 LINE L1 5660 5828 -352 2052 135 3 14 chr10 27065882 27066178 -113250587 + AluSx SINE Alu 1 293 -19 1663 116 43 0 chr10 27066327 27066585 -113250180 + L1MA4 LINE L1 6018 6286 -14 1772 179 0 10 chr10 27066690 27066991 -113249774 + AluJo SINE Alu 1 298 -14 192 40 0 0 chr10 27066991 27067016 -113249749 + (GA)n Simple_repeat Simple_repeat 2 26 0 2202 176 53 10 chr10 27067249 27067594 -113249171 + MLT2D LTR ERVL 1 330 -84 323 22 0 22 chr10 27067594 27067639 -113249126 + (TC)n Simple_repeat Simple_repeat 1 44 0 * 342 0 0 0 chr10 27067638 27067676 -113249089 + (CA)n Simple_repeat Simple_repeat 1 38 0 2202 176 53 10 chr10 27067639 27067727 -113249038 + MLT2D LTR ERVL 330 414 0 651 206 116 0 chr10 27068334 27068480 -113248285 - MER5A DNA MER1_type -26 163 1 1772 162 7 10 chr10 27068551 27068841 -113247924 - AluJo SINE Alu -23 289 1 196 391 16 0 chr10 27069015 27069079 -113247686 - L2 LINE L2 -92 3180 3116 451 241 98 8 chr10 27069383 27069516 -113247249 - MLT1B LTR MaLR -245 145 1 2188 109 3 7 chr10 27069570 27069874 -113246891 + AluSx SINE Alu 1 303 -9 2195 162 34 29 chr10 27069933 27070481 -113246284 + MLT2A2 LTR ERVL 3 554 0 799 198 12 6 chr10 27070509 27070671 -113246094 + MER3 DNA MER1_type 7 122 -87 2333 98 16 0 chr10 27071126 27071433 -113245332 + AluSx SINE Alu 1 312 0 234 324 36 54 chr10 27071548 27071659 -113245106 + MIR SINE MIR 13 121 -87 3164 128 20 0 chr10 27071663 27072203 -113244562 + L1MA5A LINE L1 5669 6292 -5 205 89 44 22 chr10 27072312 27072357 -113244408 + CT-rich Low_complexity Low_complexity 2 47 0 813 188 0 40 chr10 27072360 27072509 -113244256 - FLAM_C SINE Alu 0 143 1 306 408 40 26 chr10 27072550 27073006 -113243759 + L2 LINE L2 2372 2833 -481 2294 99 3 0 chr10 27073197 27073491 -113243274 + AluSx SINE Alu 1 295 -17 2128 122 7 0 chr10 27073624 27073918 -113242847 - AluSx SINE Alu -16 296 1 1486 256 36 17 chr10 27073920 27074341 -113242424 + LTR47B LTR ERVL 15 443 0 260 250 0 33 chr10 27074341 27074397 -113242368 - MER94 DNA DNA -77 57 4 258 258 200 17 chr10 27075383 27075533 -113241232 + L1ME LINE L1 5475 5596 -525 1657 150 13 80 chr10 27075533 27075846 -113240919 + AluSx SINE Alu 1 292 -20 258 258 200 17 chr10 27075846 27075990 -113240775 + L1ME LINE L1 5596 5823 -298 23 33 0 0 chr10 27076016 27076046 -113240719 + AT_rich Low_complexity Low_complexity 1 30 0 1766 144 17 34 chr10 27076113 27076411 -113240354 + AluJo SINE Alu 3 295 -17 608 101 72 15 chr10 27076445 27076453 -113240312 + (TA)n Simple_repeat Simple_repeat 1 7 -300 216 0 0 0 chr10 27076453 27076477 -113240288 + (TG)n Simple_repeat Simple_repeat 2 25 0 608 101 72 15 chr10 27076477 27076736 -113240029 + (TA)n Simple_repeat Simple_repeat 7 307 0 567 255 15 152 chr10 27076828 27076905 -113239860 + L2 LINE L2 2927 3013 -259 2973 94 3 0 chr10 27076905 27077268 -113239497 - THE1B LTR MaLR 0 364 1 567 255 15 152 chr10 27077268 27077586 -113239179 + L2 LINE L2 3013 3268 -4 582 227 170 35 chr10 27077801 27078030 -113238735 + MIR SINE MIR 3 262 0 496 122 178 0 chr10 27078148 27078238 -113238527 + MLT2B1 LTR ERVL 1 106 -414 1223 184 14 78 chr10 27078244 27078336 -113238429 + AluJb SINE Alu 26 122 -190 5560 36 12 8 chr10 27078336 27078974 -113237791 + L1PA5 LINE L1 5514 6154 0 237 65 0 0 chr10 27078974 27079005 -113237760 + (TA)n Simple_repeat Simple_repeat 1 31 0 1223 184 14 78 chr10 27079005 27079204 -113237561 + AluJb SINE Alu 120 299 -13 1275 238 55 28 chr10 27079204 27079565 -113237200 + MLT2B1 LTR ERVL 110 480 -40 315 269 13 0 chr10 27079565 27079643 -113237122 + L1MC4 LINE L1 6620 6698 -1344 564 149 0 23 chr10 27079741 27079828 -113236937 + AluJ/FRAM SINE Alu 214 298 -14 437 296 154 60 chr10 27080857 27081293 -113235472 - L2 LINE L2 -2 3311 2835 4895 165 24 21 chr10 27081342 27082500 -113234265 + L1MB3 LINE L1 4969 6128 -55 771 187 0 8 chr10 27082500 27082623 -113234142 + FLAM_A SINE Alu 1 122 -11 4895 165 24 21 chr10 27082623 27082678 -113234087 + L1MB3 LINE L1 6128 6181 -2 449 303 104 66 chr10 27082681 27083032 -113233733 - L2 LINE L2 -556 2758 2391 2125 114 3 10 chr10 27083032 27083338 -113233427 + AluSg SINE Alu 6 309 -1 449 303 104 66 chr10 27083338 27083352 -113233413 - L2 LINE L2 -923 2391 2379 339 264 108 100 chr10 27083348 27083417 -113233348 + L2 LINE L2 2912 2979 -334 * 1921 138 7 3 chr10 27083417 27083706 -113233059 - AluSx SINE Alu -22 290 1 339 264 108 100 chr10 27083706 27083977 -113232788 + L2 LINE L2 2979 3255 -58 1597 171 44 16 chr10 27084130 27084445 -113232320 - L1MA7 LINE L1 -4 6287 5964 194 286 219 34 chr10 27084477 27084596 -113232169 - L2 LINE L2 -1975 1339 1199 * 304 171 207 0 chr10 27084584 27084666 -113232099 - L2 LINE L2 -4 3268 3170 2495 74 0 3 chr10 27085207 27085517 -113231248 + AluY SINE Alu 1 309 -2 246 237 97 44 chr10 27086773 27086887 -113229878 + MIR SINE MIR 23 142 -66 1034 297 34 31 chr10 27087001 27087418 -113229347 - LTR16A LTR ERVL -8 442 25 233 211 0 84 chr10 27088677 27088748 -113228017 + MSTB2 LTR MaLR 310 374 -83 2073 154 94 30 chr10 27089080 27089482 -113227283 - MSTB1 LTR MaLR -4 428 1 1453 109 24 148 chr10 27089621 27089743 -113227022 + L1MA5A LINE L1 6004 6139 -158 2160 118 3 0 chr10 27089743 27090030 -113226735 + AluSx SINE Alu 1 288 -24 1453 109 24 148 chr10 27090030 27090238 -113226527 + L1MA5A LINE L1 6139 6293 -4 2087 148 0 0 chr10 27090241 27090539 -113226226 + AluSx SINE Alu 1 298 -14 397 311 48 6 chr10 27090640 27090807 -113225958 - MIR SINE MIR 0 262 89 620 244 58 6 chr10 27091070 27091226 -113225539 + FRAM SINE Alu 1 164 -2 1876 130 53 0 chr10 27092447 27092623 -113224142 - AluJo SINE Alu -3 309 111 282 56 0 0 chr10 27092623 27092659 -113224106 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 1876 130 53 0 chr10 27092659 27092766 -113223999 - AluJo SINE Alu -201 111 11 815 199 0 7 chr10 27092937 27093077 -113223688 - L1PB4 LINE L1 -14 6142 6002 3890 97 32 0 chr10 27093077 27093614 -113223151 - MER41A LTR ERV1 0 554 1 12883 92 24 8 chr10 27093624 27095106 -113221659 - MER41A-int LTR ERV1 -12 5934 3610 2093 138 3 0 chr10 27095106 27095403 -113221362 + AluSx SINE Alu 1 298 -14 12883 92 24 8 chr10 27095403 27095918 -113220847 - MER41A-int LTR ERV1 -2336 3610 3105 3541 143 55 10 chr10 27095935 27096550 -113220215 - L1PB4 LINE L1 -153 6003 5361 578 274 52 52 chr10 27097089 27097341 -113219424 - MIR SINE MIR 0 262 11 447 125 0 0 chr10 27098040 27098112 -113218653 + (CA)n Simple_repeat Simple_repeat 2 73 0 811 271 57 28 chr10 27098114 27098468 -113218297 + L1ME4a LINE L1 5596 5959 -162 232 123 53 0 chr10 27098435 27098492 -113218273 + L1MC4 LINE L1 6642 6701 -1341 * 846 206 0 0 chr10 27098684 27098830 -113217935 + FRAM SINE Alu 1 138 -38 310 162 29 0 chr10 27099139 27099207 -113217558 + L1MA4 LINE L1 6224 6293 -7 32 0 0 0 chr10 27099209 27099241 -113217524 + AT_rich Low_complexity Low_complexity 1 32 0 201 194 0 56 chr10 27099804 27099876 -113216889 + T-rich Low_complexity Low_complexity 2 69 0 2040 125 0 0 chr10 27099885 27100173 -113216592 + AluSx SINE Alu 1 288 -24 567 203 42 28 chr10 27101512 27101655 -113215110 + FRAM SINE Alu 31 175 -1 426 127 0 0 chr10 27101972 27102043 -113214722 + (GGGA)n Simple_repeat Simple_repeat 4 74 0 428 196 80 0 chr10 27102469 27102607 -113214158 - MER3 DNA MER1_type 0 2624 2476 407 104 149 0 chr10 27102612 27102679 -113214086 - MER3 DNA MER1_type -92 117 41 4273 112 17 1 chr10 27103387 27104506 -113212259 + L1PA13 LINE L1 4716 5853 -310 2009 95 7 7 chr10 27104607 27104901 -113211864 + L1PA13 LINE L1 5856 6149 -14 1879 143 0 0 chr10 27105077 27105342 -113211423 + AluSx SINE Alu 1 265 -47 231 62 0 0 chr10 27105342 27105374 -113211391 + Alu SINE Alu 105 136 -30 249 109 0 0 chr10 27105379 27105425 -113211340 + (TTAA)n Simple_repeat Simple_repeat 3 48 0 3463 245 79 32 chr10 27105950 27107720 -113209045 + L1MEc LINE L1 73 2088 -4308 2134 234 91 2 chr10 27107803 27108731 -113208034 + L1MEc LINE L1 2206 3337 -2878 1535 153 0 8 chr10 27109590 27109839 -113206926 - AluJo SINE Alu -15 297 51 327 268 78 13 chr10 27112180 27112333 -113204432 - MLT1J1 LTR MaLR -5 441 279 235 273 0 0 chr10 27112373 27112417 -113204348 - MLT1J1 LTR MaLR -275 171 128 493 271 66 13 chr10 27112435 27112586 -113204179 - MLT1J2 LTR MaLR -21 429 271 328 325 124 62 chr10 27113348 27113671 -113203094 + L2 LINE L2 2925 3267 -5 381 343 99 21 chr10 27113821 27114063 -113202702 + MIR SINE MIR 2 262 0 2038 116 3 14 chr10 27114655 27114968 -113201797 + AluSx SINE Alu 1 310 0 681 308 166 56 chr10 27115049 27116168 -113200597 - L2 LINE L2 -2 3270 2037 478 113 47 0 chr10 27116973 27117079 -113199686 + GA-rich Low_complexity Low_complexity 2 112 0 240 236 56 0 chr10 27117701 27117773 -113198992 + (CATATA)n Simple_repeat Simple_repeat 3 78 0 518 270 69 16 chr10 27117817 27118006 -113198759 - L1MC4a LINE L1 -1922 5886 5688 2356 98 0 13 chr10 27118694 27119011 -113197754 + AluSq SINE Alu 1 313 0 1945 131 51 51 chr10 27119669 27120044 -113196721 - THE1C LTR MaLR 0 375 1 22 35 0 0 chr10 27120735 27120764 -113196001 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr10 27121273 27121301 -113195464 + AT_rich Low_complexity Low_complexity 1 28 0 692 244 103 62 chr10 27121412 27121454 -113195311 - HsTC2 DNA Tc2 2 1900 1861 2099 98 0 0 chr10 27121454 27121728 -113195037 + AluSx SINE Alu 21 294 -18 692 244 103 62 chr10 27121728 27121920 -113194845 - HsTC2 DNA Tc2 -37 1861 1678 2986 173 66 41 chr10 27121920 27122635 -113194130 + MER44D DNA MER2_type 1 605 0 692 244 103 62 chr10 27122635 27122834 -113193931 - HsTC2 DNA Tc2 -220 1678 1272 * 840 217 106 98 chr10 27122826 27122963 -113193802 - HsTC2 DNA Tc2 -1526 372 238 2317 100 0 0 chr10 27122963 27123262 -113193503 - AluSx SINE Alu -13 299 1 840 217 106 98 chr10 27123262 27123283 -113193482 - HsTC2 DNA Tc2 -1660 238 219 2317 95 0 3 chr10 27123283 27123579 -113193186 - AluSx SINE Alu -17 295 1 840 217 106 98 chr10 27123579 27123787 -113192978 - HsTC2 DNA Tc2 -1679 219 2 877 195 0 37 chr10 27124085 27124249 -113192516 + AluJo SINE Alu 3 160 -152 748 293 12 30 chr10 27124385 27124716 -113192049 + L1ME1 LINE L1 5824 6148 -18 526 263 158 56 chr10 27124858 27125103 -113191662 - L1MDa LINE L1 -2931 3609 3322 1448 196 3 48 chr10 27125103 27125415 -113191350 - AluJb SINE Alu -14 298 1 526 263 158 56 chr10 27125415 27125492 -113191273 - L1MDa LINE L1 -3218 3322 3254 2106 137 3 0 chr10 27125543 27125843 -113190922 - AluSq SINE Alu -12 301 1 312 137 0 0 chr10 27125934 27125985 -113190780 + (CATA)n Simple_repeat Simple_repeat 2 52 0 884 263 41 26 chr10 27126174 27126623 -113190142 - L1MDa LINE L1 -3616 2924 2471 21185 46 49 3 chr10 27126835 27129554 -113187211 - L1P LINE L1 -3301 2845 1 2133 225 90 54 chr10 27131547 27131818 -113184947 - MLT1E1 LTR MaLR 0 654 394 180 0 0 0 chr10 27131818 27131838 -113184927 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 2133 225 90 54 chr10 27131838 27132197 -113184568 - MLT1E1 LTR MaLR -260 394 1 26 64 0 0 chr10 27132436 27132483 -113184282 + AT_rich Low_complexity Low_complexity 1 47 0 1343 170 6 112 chr10 27132583 27132895 -113183870 + AluJb SINE Alu 1 279 -33 216 0 0 0 chr10 27132906 27132930 -113183835 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 615 275 18 92 chr10 27132982 27133218 -113183547 + L3 LINE CR1 668 873 -704 1562 224 75 14 chr10 27133218 27133589 -113183176 - MSTD LTR MaLR 0 396 3 615 275 18 92 chr10 27133589 27133687 -113183078 + L3 LINE CR1 873 977 -600 287 83 0 0 chr10 27133728 27133764 -113183001 - U2 snRNA snRNA -152 36 1 426 242 70 53 chr10 27134570 27134855 -113181910 - L1M4 LINE L1 -915 5231 4942 1070 232 13 18 chr10 27134867 27134949 -113181816 - MER58A DNA MER1_type -2196 224 143 2055 142 39 94 chr10 27134949 27135407 -113181358 - Tigger2a DNA MER2_type -1 433 1 1070 232 13 18 chr10 27135407 27135548 -113181217 - MER58A DNA MER1_type -2277 143 2 625 270 146 28 chr10 27135550 27136329 -113180436 - L1M4 LINE L1 -1208 4938 4068 542 320 75 72 chr10 27136511 27137126 -113179639 - L1MDa LINE L1 -5413 1117 501 786 171 89 13 chr10 27137504 27137662 -113179103 + MER5B DNA MER1_type 9 178 0 26 0 0 0 chr10 27138414 27138440 -113178325 + AT_rich Low_complexity Low_complexity 1 26 0 31 26 0 0 chr10 27138922 27138960 -113177805 + AT_rich Low_complexity Low_complexity 1 38 0 1398 199 33 13 chr10 27139005 27139311 -113177454 - L1MC1 LINE L1 -6 6327 6016 2361 221 58 2 chr10 27139312 27139917 -113176848 - L1MC1 LINE L1 -812 5334 4696 2071 128 7 0 chr10 27140097 27140385 -113176380 + AluSx SINE Alu 1 290 -22 840 268 51 104 chr10 27140542 27141113 -113175652 + MLT1H1 LTR MaLR 1 555 0 330 336 31 87 chr10 27141553 27141978 -113174787 + MLT1I LTR MaLR 1 401 -8 272 347 0 0 chr10 27142297 27142392 -113174373 + L2 LINE L2 2664 2758 -556 244 295 134 13 chr10 27142653 27142802 -113173963 + L2 LINE L2 3118 3284 -29 2151 123 40 40 chr10 27143489 27143864 -113172901 - THE1C LTR MaLR 0 375 1 27 49 0 0 chr10 27144159 27144200 -113172565 + AT_rich Low_complexity Low_complexity 1 41 0 219 319 149 0 chr10 27145836 27145930 -113170835 + MIR SINE MIR 25 132 -76 369 326 43 0 chr10 27145948 27146086 -113170679 - MIR SINE MIR -8 254 111 220 362 111 39 chr10 27147182 27147489 -113169276 + L2 LINE L2 2961 3289 -24 1640 139 87 4 chr10 27147737 27148003 -113168762 - AluSq SINE Alu -25 288 1 242 256 26 13 chr10 27148477 27148555 -113168210 + CT-rich Low_complexity Low_complexity 1 79 0 281 263 71 50 chr10 27149040 27149139 -113167626 - MIR SINE MIR -77 131 31 2033 131 10 3 chr10 27149736 27150041 -113166724 - AluJb SINE Alu -5 307 1 23 0 0 0 chr10 27150196 27150219 -113166546 + AT_rich Low_complexity Low_complexity 1 23 0 341 236 210 19 chr10 27151274 27151431 -113165334 + MER5A DNA MER1_type 3 189 0 505 333 14 0 chr10 27151807 27151954 -113164811 - MIR3 SINE MIR -27 181 33 1606 191 0 20 chr10 27153011 27153315 -113163450 - AluJo SINE Alu -14 298 1 219 36 0 0 chr10 27153534 27153562 -113163203 + (GA)n Simple_repeat Simple_repeat 2 29 0 1136 307 95 39 chr10 27153775 27154737 -113162028 + L1MEd LINE L1 332 1387 -4902 203 111 37 37 chr10 27154786 27154840 -113161925 + (TTAA)n Simple_repeat Simple_repeat 1 54 0 297 169 0 0 chr10 27155206 27155265 -113161500 + (CTG)n Simple_repeat Simple_repeat 2 60 0 380 295 31 8 chr10 27155270 27155399 -113161366 - MIR SINE MIR -11 251 120 3273 104 21 4 chr10 27155430 27155909 -113160856 - LTR15 LTR ERV1 -6 487 1 248 293 35 0 chr10 27155912 27155970 -113160795 - MIR SINE MIR -199 63 4 21 57 0 0 chr10 27156022 27156057 -113160708 + AT_rich Low_complexity Low_complexity 1 35 0 920 273 22 20 chr10 27156226 27156582 -113160183 + L1MEd LINE L1 2157 2513 -3616 348 127 0 0 chr10 27156771 27156826 -113159939 + (TATG)n Simple_repeat Simple_repeat 2 56 0 1987 154 3 0 chr10 27156917 27157216 -113159549 + AluSq SINE Alu 1 300 -13 310 254 138 35 chr10 27157268 27157345 -113159420 + L1MEd LINE L1 2843 2911 -3218 1793 150 0 48 chr10 27157345 27157658 -113159107 + AluJb SINE Alu 1 298 -14 310 254 138 35 chr10 27157658 27157891 -113158874 + L1MEd LINE L1 2911 3185 -2944 1346 249 27 22 chr10 27158044 27158450 -113158315 - L1ME1 LINE L1 -18 6148 5741 2318 265 39 16 chr10 27158625 27159840 -113156925 - L1MEc LINE L1 -3230 3310 2091 243 88 0 0 chr10 27159840 27159874 -113156891 + (TG)n Simple_repeat Simple_repeat 1 34 0 2318 265 39 16 chr10 27159874 27159929 -113156836 - L1MEc LINE L1 -4449 2091 2039 303 185 0 0 chr10 27159952 27160006 -113156759 - MLT2B3 LTR ERVL 0 520 467 220 194 0 0 chr10 27160006 27160042 -113156723 + polypyrimidine Low_complexity Low_complexity 2 37 0 189 0 0 0 chr10 27160065 27160086 -113156679 + (TATG)n Simple_repeat Simple_repeat 4 24 0 2095 214 85 19 chr10 27160109 27160582 -113156183 - MLT2B3 LTR ERVL -46 508 5 508 211 30 23 chr10 27160586 27160719 -113156046 - L1MEc LINE L1 -4561 1979 1846 490 239 181 32 chr10 27160904 27161092 -113155673 - MIR SINE MIR 0 262 47 342 340 77 13 chr10 27161158 27161314 -113155451 - MIR3 SINE MIR -34 174 9 266 353 42 8 chr10 27161843 27161962 -113154803 + MIR SINE MIR 16 138 -70 351 274 12 0 chr10 27161982 27162066 -113154699 - L2 LINE L2 0 3272 3188 2148 80 42 0 chr10 27162275 27162563 -113154202 - AluY SINE Alu -11 300 1 31 76 0 0 chr10 27163747 27163813 -113152952 + AT_rich Low_complexity Low_complexity 1 66 0 2147 117 3 3 chr10 27166592 27166890 -113149875 - AluSg SINE Alu -12 298 1 21 57 0 0 chr10 27167190 27167225 -113149540 + AT_rich Low_complexity Low_complexity 1 35 0 580 325 105 18 chr10 27167904 27168246 -113148519 + L2 LINE L2 2369 2740 -574 2522 53 0 0 chr10 27168260 27168559 -113148206 - AluY SINE Alu -12 299 1 327 318 162 0 chr10 27168614 27168768 -113147997 + L2 LINE L2 2881 3059 -213 1157 260 46 48 chr10 27168782 27169239 -113147526 - LTR16A1 LTR ERVL -1 456 1 216 161 65 16 chr10 27169284 27169346 -113147419 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 221 0 35 0 chr10 27169346 27169375 -113147390 + (ATTG)n Simple_repeat Simple_repeat 3 32 0 973 256 14 5 chr10 27169481 27169696 -113147069 - MIR SINE MIR 0 262 46 337 359 57 13 chr10 27170013 27170172 -113146593 + MIR3 SINE MIR 32 197 -11 483 207 25 25 chr10 27170748 27170869 -113145896 + MIR SINE MIR 24 144 -118 21 0 0 0 chr10 27171573 27171594 -113145171 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr10 27171894 27171918 -113144847 + AT_rich Low_complexity Low_complexity 1 24 0 2458 209 38 12 chr10 27171979 27172557 -113144208 - L1MA9 LINE L1 -39 6273 5681 1058 178 0 0 chr10 27172667 27172841 -113143924 - AluSx SINE Alu -4 308 135 445 123 0 0 chr10 27172841 27172906 -113143859 - AluSx SINE Alu -248 65 1 1933 169 43 62 chr10 27172907 27173422 -113143343 - MLT1D LTR MaLR 0 505 1 234 302 0 0 chr10 27173644 27173707 -113143058 + GA-rich Low_complexity Low_complexity 2 64 0 208 299 0 52 chr10 27174097 27174174 -113142591 + MIR3 SINE MIR 120 192 -16 207 341 110 0 chr10 27174189 27174271 -113142494 - MER5B DNA MER1_type -5 173 83 1214 234 54 28 chr10 27174590 27174907 -113141858 - L1ME2 LINE L1 -10 6154 5826 2352 71 0 34 chr10 27174907 27175229 -113141536 - AluY SINE Alu 0 311 1 1214 234 54 28 chr10 27175229 27175265 -113141500 - L1ME2 LINE L1 -338 5826 5792 686 211 83 39 chr10 27175401 27175581 -113141184 - MER58C DNA MER1_type 0 215 28 463 161 92 0 chr10 27175597 27175684 -113141081 + MER3 DNA MER1_type 1 95 -114 336 361 147 12 chr10 27175684 27175936 -113140829 + L3 LINE CR1 252 537 -1040 960 177 59 30 chr10 27176001 27176204 -113140561 - MER3 DNA MER1_type 0 209 1 545 277 6 60 chr10 27176204 27176370 -113140395 + L3 LINE CR1 584 740 -837 354 234 0 32 chr10 27176507 27176601 -113140164 - MER103 DNA DNA -45 121 31 391 318 28 28 chr10 27176606 27176782 -113139983 + L3 LINE CR1 780 955 -622 215 143 61 0 chr10 27176947 27176996 -113139769 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 629 294 70 0 chr10 27177235 27177422 -113139343 + MIR SINE MIR 5 204 -58 254 214 129 14 chr10 27177513 27177583 -113139182 - MIR SINE MIR -112 150 73 328 311 68 40 chr10 27178149 27178297 -113138468 - L2 LINE L2 -5 3267 3116 229 289 0 0 chr10 27179384 27179436 -113137329 + (CATA)n Simple_repeat Simple_repeat 2 53 0 243 88 0 0 chr10 27179825 27179859 -113136906 + (CA)n Simple_repeat Simple_repeat 1 34 0 299 85 21 0 chr10 27179859 27179906 -113136859 + (GA)n Simple_repeat Simple_repeat 1 48 0 1742 164 31 0 chr10 27180216 27180503 -113136262 - AluJo SINE Alu -13 299 4 1102 258 87 49 chr10 27180516 27180991 -113135774 - L1MC4a LINE L1 -1929 5879 5379 1905 73 55 0 chr10 27180991 27181263 -113135502 - L1PA10 LINE L1 -11 6157 5871 1102 258 87 49 chr10 27181263 27181342 -113135423 - L1MC4a LINE L1 -2429 5379 5304 4539 197 37 17 chr10 27181366 27182424 -113134341 - L1MB3 LINE L1 0 6183 5073 2493 116 6 6 chr10 27182424 27182786 -113133979 + THE1B LTR MaLR 1 362 -2 4539 197 37 17 chr10 27182786 27183418 -113133347 - L1MB3 LINE L1 -1110 5073 4455 500 288 98 80 chr10 27183429 27184469 -113132296 - L1MC4a LINE L1 -855 5291 4270 4774 216 52 25 chr10 27184469 27185884 -113130881 - Charlie1a DNA MER1_type 0 1455 3 500 288 98 80 chr10 27185884 27186065 -113130700 - L1MC4a LINE L1 -1876 4270 4094 1466 29 0 0 chr10 27186065 27186238 -113130527 + L1PA4 LINE L1 5977 6149 -6 500 288 98 80 chr10 27186238 27186927 -113129838 - L1MC4a LINE L1 -2052 4094 3332 2216 90 0 0 chr10 27186927 27187229 -113129536 - AluSc SINE Alu 0 304 3 500 288 98 80 chr10 27187229 27187571 -113129194 - L1MC4a LINE L1 -2814 3332 2997 21 36 0 0 chr10 27187591 27187619 -113129146 + AT_rich Low_complexity Low_complexity 1 28 0 235 155 0 35 chr10 27187661 27187719 -113129046 + (TA)n Simple_repeat Simple_repeat 2 57 0 258 32 0 0 chr10 27187732 27187763 -113129002 + (CA)n Simple_repeat Simple_repeat 2 32 0 279 285 113 40 chr10 27187791 27188271 -113128494 - L1MC4a LINE L1 -3321 2825 2311 991 295 8 11 chr10 27188732 27189102 -113127663 - HAL1b LINE L1 -735 613 245 1804 240 86 31 chr10 27189104 27189653 -113127112 - MER119 DNA MER1_type 0 583 5 384 209 0 0 chr10 27189691 27189782 -113126983 + (TATG)n Simple_repeat Simple_repeat 3 93 0 2113 108 14 14 chr10 27189884 27190180 -113126585 - AluSx SINE Alu -16 296 1 1959 119 22 0 chr10 27190547 27190855 -113125910 - AluSx SINE Alu 0 314 1 198 324 14 14 chr10 27191583 27191657 -113125108 + L2 LINE L2 2694 2767 -547 305 330 74 80 chr10 27191938 27192289 -113124476 + L2 LINE L2 2915 3263 -9 411 301 18 9 chr10 27193883 27193996 -113122769 + MIR3 SINE MIR 54 167 -41 267 31 0 0 chr10 27194478 27194510 -113122255 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2504 59 3 0 chr10 27194932 27195239 -113121526 + AluY SINE Alu 1 308 -3 10321 120 16 28 chr10 27195339 27195674 -113121091 - Tigger1 DNA MER2_type -788 1630 1293 2318 80 3 0 chr10 27195674 27195976 -113120789 - AluY SINE Alu -8 303 1 10321 120 16 28 chr10 27195976 27196360 -113120405 - Tigger1 DNA MER2_type -1125 1293 906 1390 194 45 21 chr10 27196360 27196649 -113120116 - AluJo SINE Alu -16 296 1 10321 120 16 28 chr10 27196649 27197576 -113119189 - Tigger1 DNA MER2_type -1512 906 2 1872 164 0 34 chr10 27197652 27197975 -113118790 - AluJo SINE Alu 0 312 1 3449 118 13 85 chr10 27198121 27198300 -113118465 - L1MA6 LINE L1 -388 5912 5722 198 0 0 0 chr10 27198300 27198322 -113118443 + (CA)n Simple_repeat Simple_repeat 2 23 0 3449 118 13 85 chr10 27198322 27198774 -113117991 - L1MA6 LINE L1 -578 5722 5343 2636 104 46 22 chr10 27198774 27199189 -113117576 - L1PA11 LINE L1 0 6174 5750 3449 118 13 85 chr10 27199189 27199355 -113117410 - L1MA6 LINE L1 -957 5343 5167 1759 177 54 3 chr10 27199352 27199685 -113117080 + L1MA7 LINE L1 5909 6258 -33 * 395 208 52 0 chr10 27199685 27199762 -113117003 + Tigger5 DNA MER2_type 1 81 -2242 298 270 79 22 chr10 27199762 27199851 -113116914 - Tigger5 DNA MER2_type -6 2317 2224 * 394 268 0 0 chr10 27199830 27199912 -113116853 + Tigger5 DNA MER2_type 2242 2323 0 275 167 0 0 chr10 27199912 27199960 -113116805 + L1MA9 LINE L1 6265 6312 0 291 85 0 0 chr10 27200077 27200124 -113116641 + (CA)n Simple_repeat Simple_repeat 2 48 0 25 0 0 0 chr10 27200691 27200716 -113116049 + AT_rich Low_complexity Low_complexity 1 25 0 2177 123 0 0 chr10 27201477 27201779 -113114986 + AluSq SINE Alu 1 302 -11 2435 50 0 13 chr10 27201982 27202283 -113114482 + AluY SINE Alu 1 297 -14 987 73 46 20 chr10 27202842 27202993 -113113772 - L1PA2 LINE L1 0 6155 6001 1454 178 22 38 chr10 27203752 27204067 -113112698 - AluJo SINE Alu 0 312 3 274 234 218 0 chr10 27204646 27204770 -113111995 + L1MC5 LINE L1 7757 7907 -54 254 222 222 32 chr10 27204931 27205057 -113111708 - MER5B DNA MER1_type -28 150 1 251 287 35 11 chr10 27205245 27205332 -113111433 - MIR3 SINE MIR -7 201 113 204 297 0 68 chr10 27205358 27205432 -113111333 - L2 LINE L2 -9 3263 3195 301 226 97 73 chr10 27207483 27207607 -113109158 + MIR SINE MIR 80 206 -56 21 0 0 0 chr10 27207825 27207846 -113108919 + AT_rich Low_complexity Low_complexity 1 21 0 505 279 49 22 chr10 27208692 27208875 -113107890 + MIR SINE MIR 75 262 0 1109 279 122 28 chr10 27209225 27209759 -113107006 + MLT1L LTR MaLR 15 598 -17 2646 254 72 13 chr10 27209977 27211159 -113105606 - L1ME3A LINE L1 0 6170 4917 334 134 96 4 chr10 27211215 27211454 -113105311 + (TA)n Simple_repeat Simple_repeat 1 260 0 842 230 70 33 chr10 27211522 27211822 -113104943 - L1ME3A LINE L1 -1424 4722 4412 430 202 50 0 chr10 27211838 27211937 -113104828 - FLAM_A SINE Alu -2 140 37 793 288 77 9 chr10 27212071 27212540 -113104225 - L1M LINE L1 -743 5403 4917 325 126 96 18 chr10 27212595 27212865 -113103900 + (TA)n Simple_repeat Simple_repeat 1 291 0 2087 230 94 62 chr10 27212932 27213253 -113103512 - L1M4 LINE L1 -1424 4722 4413 1420 146 146 22 chr10 27213253 27213521 -113103244 - AluJo SINE Alu 0 302 2 2087 230 94 62 chr10 27213521 27214141 -113102624 - L1M4 LINE L1 -1733 4413 3750 249 198 17 112 chr10 27214406 27214522 -113102243 - L1ME LINE L1 -5926 144 40 697 316 90 32 chr10 27214698 27215531 -113101234 + L1MEc LINE L1 940 1820 -4576 210 37 0 0 chr10 27216071 27216098 -113100667 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 327 213 66 16 chr10 27216729 27216851 -113099914 - L1ME4a LINE L1 -16 6105 5978 364 348 79 17 chr10 27217818 27217996 -113098769 - MER5A DNA MER1_type 0 189 1 1237 103 82 30 chr10 27218508 27218741 -113098024 - L1MA8 LINE L1 -4 6287 6043 1998 169 35 3 chr10 27218998 27219341 -113097424 - MLT1A1 LTR MaLR -11 354 1 25 0 0 0 chr10 27220687 27220712 -113096053 + AT_rich Low_complexity Low_complexity 1 25 0 585 318 23 18 chr10 27221097 27221314 -113095451 + MIR SINE MIR 8 225 -37 1605 237 53 12 chr10 27221325 27221742 -113095023 - MLT1D LTR MaLR -66 439 6 360 0 0 0 chr10 27222632 27222672 -113094093 + (CA)n Simple_repeat Simple_repeat 2 41 0 2478 175 55 17 chr10 27223231 27223628 -113093137 - MLT1D LTR MaLR -8 497 78 1789 158 158 13 chr10 27223628 27224002 -113092763 + MSTA LTR MaLR 1 428 0 2478 175 55 17 chr10 27224002 27224079 -113092686 - MLT1D LTR MaLR -427 78 5 24 53 0 0 chr10 27224485 27224523 -113092242 + AT_rich Low_complexity Low_complexity 1 38 0 183 80 0 0 chr10 27225935 27225960 -113090805 + (T)n Simple_repeat Simple_repeat 1 25 0 1801 92 4 0 chr10 27225966 27226227 -113090538 - L1PA11 LINE L1 0 6174 5913 532 15 0 0 chr10 27227662 27227727 -113089038 + L1PA3 LINE L1 6091 6155 0 1077 195 90 67 chr10 27227922 27228312 -113088453 - L1 LINE L1 -3826 2502 2098 1991 135 3 3 chr10 27228312 27228608 -113088157 + AluSq SINE Alu 3 298 -15 1077 195 90 67 chr10 27228608 27228743 -113088022 - L1 LINE L1 -4230 2098 1968 6688 178 60 7 chr10 27228854 27230482 -113086283 - L1 LINE L1 -4083 1245 3 2059 148 19 23 chr10 27230530 27230893 -113085872 + THE1B LTR MaLR 1 426 -2 11152 106 6 1 chr10 27230895 27232468 -113084297 + THE1B-int LTR MaLR 1 1580 0 2288 115 19 22 chr10 27232468 27232833 -113083932 + THE1B LTR MaLR 1 364 0 1310 238 36 30 chr10 27232833 27233300 -113083465 - L1M4 LINE L1 -3270 2876 2407 4695 200 33 26 chr10 27233323 27233371 -113083394 - L1MB2 LINE L1 -9 6162 6116 6689 81 12 11 chr10 27233371 27235089 -113081676 - L1PA7 LINE L1 -14 6140 4425 4695 200 33 26 chr10 27235089 27236927 -113079838 - L1MB2 LINE L1 -55 6116 4261 443 238 145 25 chr10 27236918 27237153 -113079612 - L1M4 LINE L1 -3717 2429 2167 * 260 233 0 41 chr10 27237207 27237280 -113079485 - L3 LINE CR1 -557 1020 951 728 212 31 62 chr10 27237490 27237526 -113079239 + MIR SINE MIR 65 101 -161 2885 142 27 8 chr10 27237526 27238004 -113078761 - LTR45B LTR ERV1 0 489 3 728 212 31 62 chr10 27238004 27238160 -113078605 + MIR SINE MIR 101 251 -11 574 333 42 17 chr10 27238101 27238338 -113078427 - MIR SINE MIR -6 256 14 * 286 312 178 32 chr10 27238334 27238677 -113078088 - L3 LINE CR1 -878 699 307 * 24 0 0 0 chr10 27239153 27239177 -113077588 + AT_rich Low_complexity Low_complexity 1 24 0 1107 272 137 41 chr10 27239873 27240528 -113076237 - L1ME3A LINE L1 -42 6128 5537 1866 139 11 41 chr10 27240528 27240896 -113075869 - L1MA8 LINE L1 -4 6287 5931 1107 272 137 41 chr10 27240896 27241748 -113075017 - L1ME3A LINE L1 -633 5537 4468 438 309 55 14 chr10 27241754 27241971 -113074794 - L1ME3A LINE L1 -3623 2523 2298 674 292 46 29 chr10 27242140 27242380 -113074385 + LTR16C LTR ERVL 248 491 0 2216 133 37 0 chr10 27242390 27242797 -113073968 + L1PA13 LINE L1 5189 5607 -556 * 17720 27 3 0 chr10 27242795 27245477 -113071288 - L1P LINE L1 -1517 4629 1941 7503 29 7 1 chr10 27245477 27246961 -113069804 + L1PA3 LINE L1 4664 6152 -3 3024 140 29 4 chr10 27246999 27247491 -113069274 + L1PA13 LINE L1 5593 6096 -67 1034 282 65 23 chr10 27247570 27248272 -113068493 - L1MEc LINE L1 -3035 3180 2449 3925 234 60 30 chr10 27248350 27249672 -113067093 - L1MD2 LINE L1 -18 6410 5012 183 42 0 0 chr10 27249672 27249696 -113067069 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3925 234 60 30 chr10 27249696 27250347 -113066418 - L1MD2 LINE L1 -1416 5012 4382 657 291 31 88 chr10 27250657 27251271 -113065494 - L1MD2 LINE L1 -4586 1810 1232 3869 161 37 1 chr10 27251461 27252190 -113064575 - L1MB7 LINE L1 0 6184 5430 453 211 109 51 chr10 27252244 27252419 -113064346 - L1ME3A LINE L1 -76 6094 5910 502 259 118 84 chr10 27252581 27252882 -113063883 - L1MEc LINE L1 -4169 2227 1903 1683 195 13 10 chr10 27252882 27253189 -113063576 - AluJo SINE Alu -4 308 1 502 259 118 84 chr10 27253189 27253361 -113063404 - L1MEc LINE L1 -4493 1903 1738 413 224 12 0 chr10 27254185 27254270 -113062495 - L2 LINE L2 -1 3312 3227 413 264 88 50 chr10 27254448 27254630 -113062135 - L1ME3A LINE L1 -221 5949 5761 226 333 12 0 chr10 27254645 27254729 -113062036 - L1ME3A LINE L1 -516 5648 5564 308 396 55 0 chr10 27254824 27255006 -113061759 - L2 LINE L2 -616 2698 2507 840 296 137 48 chr10 27255119 27255806 -113060959 - L2 LINE L2 -1159 2155 1408 2095 118 0 16 chr10 27256918 27257233 -113059532 - AluSg SINE Alu 0 310 1 740 219 168 0 chr10 27257968 27258164 -113058601 + MIR SINE MIR 31 259 -3 7229 197 34 28 chr10 27259058 27261610 -113055155 - L1MB2 LINE L1 -4 6167 3612 2312 92 0 3 chr10 27261610 27261903 -113054862 - AluSc SINE Alu -15 294 3 7229 197 34 28 chr10 27261903 27262127 -113054638 - L1MB2 LINE L1 -2559 3612 3391 7039 183 91 45 chr10 27262742 27263942 -113052823 + MER52A LTR ERV1 50 1194 -561 2241 152 25 0 chr10 27263942 27264297 -113052468 + THE1B LTR MaLR 1 364 0 10565 112 8 31 chr10 27264297 27265914 -113050851 + THE1B-int LTR MaLR 1 1580 0 2500 129 3 0 chr10 27265914 27266277 -113050488 + THE1B LTR MaLR 1 364 0 7039 183 91 45 chr10 27266277 27266611 -113050154 + MER52A LTR ERV1 1193 1755 0 22 35 0 0 chr10 27266618 27266647 -113050118 + AT_rich Low_complexity Low_complexity 1 29 0 255 314 49 10 chr10 27267603 27267705 -113049060 + L2 LINE L2 2052 2157 -1157 374 219 0 0 chr10 27267705 27267778 -113048987 - 7SK RNA RNA 0 193 121 709 198 0 16 chr10 27267814 27267940 -113048825 - 7SK RNA RNA -68 125 2 1272 261 41 26 chr10 27267942 27268333 -113048432 + L2 LINE L2 2143 2539 -775 295 359 35 28 chr10 27268349 27268491 -113048274 - MIR SINE MIR -113 149 7 27 0 0 0 chr10 27268960 27268987 -113047778 + AT_rich Low_complexity Low_complexity 1 27 0 203 203 0 51 chr10 27269435 27269494 -113047271 + T-rich Low_complexity Low_complexity 3 58 0 270 81 0 0 chr10 27269589 27269626 -113047139 + (CCTA)n Simple_repeat Simple_repeat 2 38 0 584 286 0 0 chr10 27270465 27270612 -113046153 - MLT1E LTR MaLR -9 645 499 770 164 0 0 chr10 27270613 27270729 -113046036 + FLAM_C SINE Alu 1 116 -17 905 275 57 45 chr10 27270904 27271302 -113045463 - MLT1E LTR MaLR -146 447 45 237 135 0 0 chr10 27271811 27271848 -113044917 + MLT1E3 LTR MaLR 1 37 -617 1473 235 27 46 chr10 27271942 27272388 -113044377 + MLT1E3 LTR MaLR 130 624 0 2231 136 3 45 chr10 27272989 27273080 -113043685 + MER1B DNA MER1_type 1 94 -2618 1881 163 70 14 chr10 27273080 27273435 -113043330 - THE1C LTR MaLR 0 375 1 2231 136 3 45 chr10 27273435 27273697 -113043068 + MER1B DNA MER1_type 94 339 0 242 236 55 0 chr10 27274079 27274134 -113042631 + L2 LINE L2 3256 3313 0 2938 221 31 36 chr10 27276044 27276843 -113039922 + L1MC4 LINE L1 7239 8033 -9 32 0 0 0 chr10 27277004 27277036 -113039729 + AT_rich Low_complexity Low_complexity 1 32 0 263 288 12 0 chr10 27277189 27277269 -113039496 - L1ME LINE L1 -280 5841 5761 21 36 0 0 chr10 27279363 27279391 -113037374 + AT_rich Low_complexity Low_complexity 1 28 0 273 57 0 0 chr10 27279592 27279627 -113037138 + (T)n Simple_repeat Simple_repeat 1 35 0 585 287 61 81 chr10 27280252 27280560 -113036205 + LTR16C LTR ERVL 97 397 -94 3543 120 43 26 chr10 27280560 27281183 -113035582 - LTR24C LTR ERV1 -1 634 1 585 287 61 81 chr10 27281183 27281268 -113035497 + LTR16C LTR ERVL 397 482 -9 1582 308 70 0 chr10 27281469 27282014 -113034751 + L2 LINE L2 2155 2737 -577 195 42 0 0 chr10 27282014 27282038 -113034727 + (CCCTAA)n Simple_repeat Simple_repeat 5 28 0 198 365 107 6 chr10 27283748 27283907 -113032858 + L2 LINE L2 1535 1709 -1605 2076 125 0 0 chr10 27284436 27284738 -113032027 + AluSg SINE Alu 3 304 0 268 284 0 45 chr10 27284740 27284828 -113031937 - MIR3 SINE MIR -46 162 79 2540 62 3 0 chr10 27285752 27286061 -113030704 + AluY SINE Alu 1 310 -1 1640 158 3 53 chr10 27287131 27287434 -113029331 + AluJo SINE Alu 3 290 -22 478 295 8 0 chr10 27288959 27289088 -113027677 + MIR SINE MIR 14 143 -119 1800 190 58 15 chr10 27289094 27289796 -113026969 + L1MB7 LINE L1 4968 5704 -480 1691 166 36 15 chr10 27289797 27290128 -113026637 + L1MB7 LINE L1 5845 6182 -2 193 328 0 0 chr10 27290137 27290204 -113026561 + MIR SINE MIR 146 212 -50 273 243 57 0 chr10 27290800 27290870 -113025895 - MIR SINE MIR -57 151 78 27 62 0 0 chr10 27292644 27292692 -113024073 + AT_rich Low_complexity Low_complexity 1 48 0 9731 62 96 5 chr10 27292865 27294214 -113022551 - L1P LINE L1 -4674 1472 1 3417 178 53 6 chr10 27294546 27295113 -113021652 - L1MB4 LINE L1 -109 6071 5468 230 0 33 0 chr10 27295113 27295143 -113021622 + (TTG)n Simple_repeat Simple_repeat 2 32 0 3417 178 53 6 chr10 27295143 27295303 -113021462 - L1MB4 LINE L1 -712 5468 5317 760 161 8 0 chr10 27295310 27295440 -113021325 - L1MC1 LINE L1 -195 6138 6008 * 3746 211 19 31 chr10 27295437 27295623 -113021142 - L1MB4 LINE L1 -814 5332 5145 1605 192 3 14 chr10 27295623 27295910 -113020855 - AluJo SINE Alu -28 284 1 3746 211 19 31 chr10 27295910 27296658 -113020107 - L1MB4 LINE L1 -1001 5145 4409 1613 128 57 60 chr10 27297722 27298004 -113018761 + MER1B DNA MER1_type 59 339 0 2368 99 14 3 chr10 27298179 27298523 -113018242 - L1PB1 LINE L1 -15 6136 5789 202 182 0 0 chr10 27298523 27298556 -113018209 + (TG)n Simple_repeat Simple_repeat 1 33 0 269 168 0 84 chr10 27298556 27298651 -113018114 + L1MC4 LINE L1 6617 6703 -1339 3146 106 18 4 chr10 27298661 27298854 -113017911 - L1PB1 LINE L1 -369 5782 5593 8524 46 11 5 chr10 27298854 27300707 -113016058 - L1PA6 LINE L1 -8 6146 4281 3146 106 18 4 chr10 27300707 27300968 -113015797 - L1PB1 LINE L1 -558 5593 5322 755 245 39 0 chr10 27300975 27301179 -113015586 + L1PB1 LINE L1 5104 5315 -831 242 285 16 114 chr10 27301484 27301607 -113015158 + MIR SINE MIR 35 145 -117 4668 151 30 0 chr10 27301607 27302368 -113014397 - Tigger1 DNA MER2_type -1631 787 4 24 0 0 0 chr10 27304207 27304231 -113012534 + AT_rich Low_complexity Low_complexity 1 24 0 14175 23 12 0 chr10 27305046 27307471 -113009294 + L1PA3 LINE L1 3717 6152 -3 284 307 122 34 chr10 27307757 27307995 -113008770 + L1MC/D LINE L1 5491 5749 -2059 293 339 38 60 chr10 27308226 27308409 -113008356 - L2 LINE L2 0 3313 3135 386 316 98 35 chr10 27308487 27308661 -113008104 - MIR SINE MIR -77 185 1 427 107 27 0 chr10 27308989 27309064 -113007701 + (TG)n Simple_repeat Simple_repeat 1 77 0 667 175 0 36 chr10 27309145 27309310 -113007455 - FLAM_C SINE Alu 0 161 2 2208 75 3 11 chr10 27309355 27309661 -113007104 + AluY SINE Alu 1 304 0 422 275 118 34 chr10 27310161 27310339 -113006426 + MIR SINE MIR 1 193 -69 798 326 73 78 chr10 27310592 27311572 -113005193 - L2 LINE L2 -2 3311 2346 984 188 0 0 chr10 27311583 27311764 -113005001 + MER53 DNA DNA 9 189 0 589 336 97 17 chr10 27311776 27312187 -113004578 - L2 LINE L2 -985 2329 1886 1948 154 0 0 chr10 27312710 27313003 -113003762 - AluJb SINE Alu -17 295 3 242 287 35 0 chr10 27313035 27313122 -113003643 + L1M4 LINE L1 4910 4999 -1147 341 364 90 42 chr10 27313153 27313744 -113003021 - L2 LINE L2 -1407 1907 1289 1249 198 4 0 chr10 27314352 27314584 -113002181 + MER58B DNA MER1_type 98 330 -11 2070 132 41 41 chr10 27314584 27314948 -113001817 - THE1B LTR MaLR 0 364 1 209 388 9 26 chr10 27317067 27317183 -112999582 + MER5A DNA MER1_type 76 189 0 583 303 89 88 chr10 27317943 27318570 -112998195 + L2 LINE L2 2231 2861 -453 1297 203 0 76 chr10 27318570 27318752 -112998013 - AluJo SINE Alu -20 292 143 2138 130 0 0 chr10 27318752 27319052 -112997713 + AluSx SINE Alu 1 300 -12 1297 203 0 76 chr10 27319052 27319185 -112997580 - AluJo SINE Alu -169 143 1 583 303 89 88 chr10 27319185 27319286 -112997479 + L2 LINE L2 2861 2960 -354 744 215 141 16 chr10 27319439 27319630 -112997135 - MER20 DNA MER1_type -2 217 3 296 245 21 0 chr10 27319714 27319808 -112996957 + (TG)n Simple_repeat Simple_repeat 2 97 0 26 30 0 0 chr10 27321034 27321067 -112995698 + AT_rich Low_complexity Low_complexity 1 33 0 239 385 0 10 chr10 27321203 27321299 -112995466 - MIR SINE MIR -162 100 6 2572 216 45 35 chr10 27321663 27321951 -112994814 - L1ME2 LINE L1 0 6164 5880 2492 62 0 19 chr10 27321951 27322260 -112994505 - AluY SINE Alu -8 303 1 2572 216 45 35 chr10 27322260 27322707 -112994058 - L1ME2 LINE L1 -284 5880 5422 24 32 0 0 chr10 27322835 27322866 -112993899 + AT_rich Low_complexity Low_complexity 1 31 0 324 298 37 21 chr10 27322895 27323086 -112993679 - L1ME4a LINE L1 -275 5846 5653 300 298 166 33 chr10 27323121 27323302 -112993463 - L1ME4a LINE L1 -1959 4187 3983 1496 129 99 1 chr10 27323398 27323719 -112993046 + L1MA8 LINE L1 5917 6277 -23 180 179 0 0 chr10 27324231 27324270 -112992495 + T-rich Low_complexity Low_complexity 1 39 0 518 312 51 59 chr10 27324875 27325346 -112991419 - L1MC/D LINE L1 -2007 5801 5335 292 208 150 92 chr10 27325546 27325666 -112991099 + MIR SINE MIR 104 230 -32 240 59 0 0 chr10 27325878 27325912 -112990853 + (GTTTG)n Simple_repeat Simple_repeat 1 34 0 828 308 113 9 chr10 27326731 27327187 -112989578 - L2 LINE L2 -63 3250 2745 603 278 139 21 chr10 27328495 27328776 -112987989 + L2 LINE L2 2995 3308 -5 1136 221 27 27 chr10 27330305 27330563 -112986202 + AluJo SINE Alu 3 260 -52 2077 148 0 0 chr10 27331102 27331399 -112985366 - AluSx SINE Alu -15 297 1 237 233 133 0 chr10 27331432 27331492 -112985273 + L2 LINE L2 3205 3272 0 531 225 92 21 chr10 27332124 27332266 -112984499 + MIR SINE MIR 17 168 -94 1347 205 0 30 chr10 27332367 27332635 -112984130 - AluJb SINE Alu -52 260 1 4435 148 19 23 chr10 27332982 27333843 -112982922 - L1MA9 LINE L1 -14 6298 5345 3675 144 25 6 chr10 27333893 27334560 -112982205 - L1MA9 LINE L1 -1168 4978 4299 234 151 0 57 chr10 27335033 27335086 -112981679 + CT-rich Low_complexity Low_complexity 5 54 0 211 264 0 0 chr10 27335188 27335257 -112981508 + (TTCA)n Simple_repeat Simple_repeat 1 69 0 472 282 92 20 chr10 27335393 27335588 -112981177 - L2 LINE L2 -901 2413 2205 1787 104 3 74 chr10 27337285 27337583 -112979182 - AluSx SINE Alu -35 277 1 219 278 119 56 chr10 27339396 27339522 -112977243 + MIR3 SINE MIR 5 138 -70 480 277 165 11 chr10 27339537 27339725 -112977040 - MIR SINE MIR -3 259 43 2077 134 23 0 chr10 27341154 27341459 -112975306 - AluSx SINE Alu 0 312 1 23 33 0 0 chr10 27341499 27341529 -112975236 + AT_rich Low_complexity Low_complexity 1 30 0 15385 121 28 5 chr10 27341689 27342694 -112974071 + Tigger1 DNA MER2_type 1 982 -1436 2267 87 3 29 chr10 27342694 27343004 -112973761 - AluY SINE Alu -9 302 1 15385 121 28 5 chr10 27343004 27344360 -112972405 + Tigger1 DNA MER2_type 982 2416 -2 405 86 0 0 chr10 27344360 27344418 -112972347 + (TGGA)n Simple_repeat Simple_repeat 1 58 0 197 349 159 20 chr10 27345454 27345649 -112971116 - MIR SINE MIR -25 237 16 748 223 26 56 chr10 27347055 27347288 -112969477 + LTR12 LTR ERV1 238 463 -251 216 0 0 0 chr10 27347750 27347774 -112968991 + (CA)n Simple_repeat Simple_repeat 2 25 0 228 244 82 44 chr10 27347779 27347881 -112968884 - MER51D LTR ERV1 0 657 547 4745 127 34 8 chr10 27347881 27348640 -112968125 - MER4E LTR ERV1 0 779 1 228 244 82 44 chr10 27348640 27348672 -112968093 - MER51D LTR ERV1 -110 547 518 2797 149 54 31 chr10 27348712 27349284 -112967481 - LTR60 LTR ERV1 0 586 2 342 323 87 0 chr10 27349302 27349429 -112967336 + MIR SINE MIR 53 190 -72 304 311 119 90 chr10 27349821 27350065 -112966700 - L2 LINE L2 -49 3223 2973 2254 281 81 19 chr10 27350068 27350543 -112966222 + L2 LINE L2 2016 2563 -751 2446 85 3 0 chr10 27350543 27350850 -112965915 + AluY SINE Alu 1 308 -3 2254 281 81 19 chr10 27350850 27351176 -112965589 + L2 LINE L2 2563 2867 -447 996 195 147 51 chr10 27351262 27351595 -112965170 + MLT1A1 LTR MaLR 1 365 0 213 247 86 49 chr10 27351908 27351989 -112964776 + L2 LINE L2 2649 2732 -582 16586 37 5 0 chr10 27351997 27354797 -112961968 - L1PA5 LINE L1 0 6154 3350 1534 217 56 13 chr10 27354904 27355277 -112961488 + MLT1D LTR MaLR 3 391 -114 457 319 7 7 chr10 27355657 27355795 -112960970 + L2 LINE L2 3134 3271 -1 287 337 36 98 chr10 27357557 27357750 -112959015 - MIR3 SINE MIR -7 201 21 304 183 56 0 chr10 27357977 27358048 -112958717 + MER116 DNA Mariner 6 80 0 1226 203 8 4 chr10 27358326 27358563 -112958202 - L1MC4 LINE L1 -1013 7029 6792 279 54 0 0 chr10 27359525 27359562 -112957203 + (TG)n Simple_repeat Simple_repeat 2 38 0 4020 46 0 4 chr10 27359683 27360180 -112956585 - L1PA5 LINE L1 -4 6150 5656 544 215 54 34 chr10 27360182 27360387 -112956378 - HAL1b LINE L1 -311 1037 829 248 280 0 13 chr10 27360416 27360491 -112956274 - HAL1b LINE L1 -931 417 344 1890 106 8 0 chr10 27360493 27360749 -112956016 - AluSq SINE Alu -55 258 1 21 36 0 0 chr10 27360831 27360859 -112955906 + AT_rich Low_complexity Low_complexity 1 28 0 200 294 0 55 chr10 27361044 27361153 -112955612 + T-rich Low_complexity Low_complexity 3 105 0 2357 172 24 2 chr10 27361351 27361816 -112954949 - L1MB4 LINE L1 0 6180 5706 3355 214 69 12 chr10 27361841 27362606 -112954159 + MER54A LTR ERVL 93 901 0 1695 156 13 15 chr10 27362606 27362939 -112953826 - L1P2 LINE L1 -445 5709 5374 1581 211 3 7 chr10 27363223 27363517 -112953248 - AluJo SINE Alu -19 293 1 1402 255 59 15 chr10 27363635 27364027 -112952738 + L2 LINE L2 2135 2543 -771 464 260 80 47 chr10 27364176 27364326 -112952439 + L2 LINE L2 3158 3312 -1 597 330 25 13 chr10 27364705 27364941 -112951824 + L2 LINE L2 2804 3042 -271 1183 249 61 9 chr10 27366432 27366762 -112950003 + MLT1A1 LTR MaLR 1 347 -18 268 233 178 41 chr10 27367073 27367219 -112949546 + Charlie8 DNA MER1_type 75 240 -2177 523 247 190 6 chr10 27367237 27367411 -112949354 + MIR SINE MIR 1 206 -56 21 0 0 0 chr10 27367689 27367710 -112949055 + AT_rich Low_complexity Low_complexity 1 21 0 604 271 39 6 chr10 27367961 27368142 -112948623 - MLT1J LTR MaLR -324 187 1 353 294 56 0 chr10 27369496 27369656 -112947109 + L1ME LINE L1 4906 5074 -1072 289 291 40 0 chr10 27369755 27369885 -112946880 + L1ME LINE L1 5328 5462 -708 244 135 54 108 chr10 27370448 27370522 -112946243 + MLT1J2 LTR MaLR 68 137 -313 284 309 56 16 chr10 27370626 27370752 -112946013 + MLT1I LTR MaLR 277 407 -2 225 240 60 20 chr10 27371044 27371144 -112945621 - L1M4 LINE L1 -382 5796 5693 2167 144 46 8 chr10 27371145 27371513 -112945252 - MSTB1 LTR MaLR 0 432 51 183 80 0 0 chr10 27371619 27371644 -112945121 + (T)n Simple_repeat Simple_repeat 1 25 0 62 36 0 0 chr10 27372057 27372140 -112944625 + AT_rich Low_complexity Low_complexity 1 83 0 636 217 23 0 chr10 27373643 27373772 -112942993 + MIR SINE MIR 131 262 0 321 370 16 8 chr10 27374095 27374222 -112942543 + L2 LINE L2 2632 2759 -555 420 383 105 20 chr10 27374285 27374677 -112942088 + L2 LINE L2 2832 3256 -16 680 267 61 51 chr10 27375586 27375929 -112940836 - MLT1I LTR MaLR -18 391 1 28 29 0 0 chr10 27376750 27376785 -112939980 + AT_rich Low_complexity Low_complexity 1 35 0 1557 264 48 32 chr10 27376847 27377533 -112939232 - LTR51 LTR ERV1 -70 738 1 1041 178 13 49 chr10 27377634 27377859 -112938906 - MER20 DNA MER1_type 0 219 3 1022 255 134 86 chr10 27377942 27378333 -112938432 - MLT1G LTR MaLR 0 590 167 2144 124 10 0 chr10 27378333 27378632 -112938133 - AluSx SINE Alu -10 302 1 1022 255 134 86 chr10 27378632 27378808 -112937957 - MLT1G LTR MaLR -423 167 1 198 0 0 0 chr10 27379153 27379175 -112937590 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 14362 222 129 10 chr10 27379178 27383988 -112932777 - L1PB1 LINE L1 -3 6148 592 3512 17 2 0 chr10 27383988 27384396 -112932369 - L1PA2 LINE L1 -1 6154 5746 14362 222 129 10 chr10 27384396 27385068 -112931697 - L1PB1 LINE L1 -5559 592 1 1883 116 20 3 chr10 27385074 27385375 -112931390 - L1PBa LINE L1 -4950 1913 1608 449 88 0 0 chr10 27385376 27385433 -112931332 - U6 snRNA snRNA -1 106 50 403 352 62 6 chr10 27385731 27385893 -112930872 + MIR3 SINE MIR 21 191 -17 2500 180 165 10 chr10 27386654 27387247 -112929518 - MER76 LTR ERV -2 686 2 468 241 120 6 chr10 27387286 27387444 -112929321 + L1MB8 LINE L1 2510 2685 -3461 * 4970 183 61 34 chr10 27387420 27389485 -112927280 + L1MB8 LINE L1 4062 6172 -6 2195 117 10 3 chr10 27389502 27389809 -112926956 + AluSx SINE Alu 1 309 -3 630 285 58 23 chr10 27389855 27390164 -112926601 + L1ME3 LINE L1 47 366 -5704 567 254 105 28 chr10 27390176 27390424 -112926341 - LTR41 LTR ERVL -7 766 500 1598 238 149 13 chr10 27390552 27391263 -112925502 + L1ME3 LINE L1 2117 2924 -3156 235 284 118 0 chr10 27391365 27391467 -112925298 + L1ME3 LINE L1 3484 3597 -2483 1795 255 55 7 chr10 27391753 27392338 -112924427 + L1ME3 LINE L1 4262 4874 -1206 2153 91 14 0 chr10 27392381 27392668 -112924097 + AluY SINE Alu 1 291 -20 247 316 0 0 chr10 27393604 27393680 -112923085 + L1ME3 LINE L1 5825 5900 -196 195 243 71 29 chr10 27394499 27394569 -112922196 + MIR SINE MIR 50 122 -140 226 240 110 20 chr10 27395070 27395170 -112921595 - MIR SINE MIR -90 172 64 529 285 65 34 chr10 27396155 27396446 -112920319 - L1MC4a LINE L1 -1884 5924 5625 230 403 47 20 chr10 27396573 27396722 -112920043 + MER5B DNA MER1_type 23 175 -3 909 241 53 4 chr10 27397071 27397316 -112919449 + MIR SINE MIR 4 260 -2 887 126 24 0 chr10 27397632 27397759 -112919006 + AluSq/x SINE Alu 1 130 -182 261 0 0 0 chr10 27397759 27397788 -112918977 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1387 143 0 108 chr10 27397789 27398048 -112918717 + AluSx SINE Alu 57 287 -25 192 77 0 0 chr10 27398051 27398077 -112918688 + (CAGA)n Simple_repeat Simple_repeat 2 27 0 1509 248 140 19 chr10 27398443 27398972 -112917793 + MLT1E LTR MaLR 1 593 0 404 336 14 7 chr10 27399253 27399399 -112917366 - MIR SINE MIR -114 148 2 31 99 0 0 chr10 27399479 27399580 -112917185 + AT_rich Low_complexity Low_complexity 1 101 0 331 314 83 0 chr10 27400460 27400581 -112916184 - MER91B DNA MER1_type -58 132 2 26 30 0 0 chr10 27400966 27400999 -112915766 + AT_rich Low_complexity Low_complexity 1 33 0 2224 112 147 5 chr10 27401051 27401426 -112915339 + MSTA LTR MaLR 1 428 0 192 77 0 0 chr10 27401618 27401644 -112915121 + (TTG)n Simple_repeat Simple_repeat 2 27 0 272 230 42 108 chr10 27401856 27401890 -112914875 - L1ME4a LINE L1 -153 5968 5933 783 214 0 88 chr10 27401890 27402082 -112914683 - FAM SINE Alu 0 175 1 272 230 42 108 chr10 27402082 27402260 -112914505 - L1ME4a LINE L1 -188 5933 5770 21 0 0 0 chr10 27402924 27402945 -112913820 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 27403036 27403058 -112913707 + AT_rich Low_complexity Low_complexity 1 22 0 7499 30 6 0 chr10 27403371 27404353 -112912412 + L1PA5 LINE L1 5159 6145 -9 297 0 0 0 chr10 27404353 27404386 -112912379 + (TA)n Simple_repeat Simple_repeat 2 34 0 333 321 98 5 chr10 27404412 27404596 -112912169 - L1ME4a LINE L1 -530 5634 5434 249 294 49 10 chr10 27404674 27404776 -112911989 - L1ME4a LINE L1 -837 5309 5204 232 139 76 13 chr10 27405231 27405310 -112911455 + (TTATA)n Simple_repeat Simple_repeat 1 84 0 2390 83 3 3 chr10 27405857 27406159 -112910606 + AluSq SINE Alu 1 302 -11 2132 125 0 0 chr10 27406449 27406737 -112910028 - AluSx SINE Alu -24 288 1 1566 234 23 0 chr10 27406801 27407155 -112909610 - L1PB4 LINE L1 -8 6148 5787 269 282 14 0 chr10 27407701 27407772 -112908993 + MIR SINE MIR 86 157 -105 23 54 0 0 chr10 27407995 27408032 -112908733 + AT_rich Low_complexity Low_complexity 1 37 0 6624 64 2 0 chr10 27408032 27408876 -112907889 - L1PA7 LINE L1 -7 6147 5302 201 178 0 0 chr10 27409060 27409105 -112907660 + CT-rich Low_complexity Low_complexity 3 47 0 262 290 80 20 chr10 27409113 27409213 -112907552 - L2 LINE L2 -2 3270 3165 24863 37 0 0 chr10 27409659 27412697 -112904068 - L1P LINE L1 -1034 5112 2075 566 100 0 11 chr10 27412801 27412891 -112903874 + AluSg/x SINE Alu 219 307 -3 1366 148 48 65 chr10 27414595 27414750 -112902015 - AluJo SINE Alu -17 285 129 278 0 54 0 chr10 27414750 27414787 -112901978 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 2596 17 0 14 chr10 27414787 27415081 -112901684 - AluYb8 SINE Alu -27 291 2 1366 148 48 65 chr10 27415081 27415214 -112901551 - AluJo SINE Alu -171 131 1 2084 110 55 58 chr10 27415689 27416054 -112900711 - THE1B LTR MaLR 0 364 1 193 362 0 0 chr10 27416866 27416924 -112899841 + MIR SINE MIR 21 78 -130 692 291 39 69 chr10 27418640 27419001 -112897764 - MER93a LTR ERV1 0 402 53 234 258 55 86 chr10 27419136 27419264 -112897501 - L2 LINE L2 -4 3268 3145 1818 181 0 0 chr10 27419551 27419855 -112896910 + AluSx SINE Alu 1 304 -8 2013 118 3 37 chr10 27420246 27420567 -112896198 - AluSg SINE Alu 0 310 1 3523 106 6 0 chr10 27420715 27421208 -112895557 - LOR1a LTR ERV1 0 497 2 877 272 19 38 chr10 27421959 27422224 -112894541 - MIR SINE MIR 0 262 3 192 222 79 32 chr10 27424090 27424153 -112892612 - L2 LINE L2 -1147 2167 2102 312 214 41 20 chr10 27424897 27424995 -112891770 - L1ME4a LINE L1 -53 6068 5969 593 213 73 0 chr10 27425009 27425145 -112891620 - MER103 DNA DNA -18 148 3 21 57 0 0 chr10 27428813 27428848 -112887917 + AT_rich Low_complexity Low_complexity 1 35 0 2252 165 57 23 chr10 27429479 27429951 -112886814 + L1MB7 LINE L1 5681 6168 -16 379 259 85 55 chr10 27429963 27430164 -112886601 - L2 LINE L2 -15 3298 3092 662 200 0 0 chr10 27430388 27430513 -112886252 + FAM SINE Alu 35 159 -26 231 211 0 0 chr10 27430537 27430632 -112886133 + (TA)n Simple_repeat Simple_repeat 2 96 0 196 354 105 79 chr10 27437873 27437989 -112878776 + L2 LINE L2 2897 3009 -263 389 212 44 66 chr10 27437989 27438061 -112878704 + MER94 DNA DNA 1 70 -64 1779 164 3 23 chr10 27438061 27438360 -112878405 + AluJo SINE Alu 1 293 -19 389 212 44 66 chr10 27438360 27438424 -112878341 + MER94 DNA DNA 70 134 0 196 354 105 79 chr10 27438424 27438660 -112878105 + L2 LINE L2 3009 3258 -14 2132 113 0 7 chr10 27439953 27440244 -112876521 + AluSq SINE Alu 1 289 -24 1991 157 0 3 chr10 27440402 27440708 -112876057 + AluJo SINE Alu 1 305 -7 270 369 89 0 chr10 27440730 27440887 -112875878 + MIR3 SINE MIR 36 206 -2 273 57 0 0 chr10 27440887 27440922 -112875843 + (TG)n Simple_repeat Simple_repeat 2 36 0 25 0 0 0 chr10 27442159 27442184 -112874581 + AT_rich Low_complexity Low_complexity 1 25 0 1466 82 0 0 chr10 27442184 27442378 -112874387 - L1PA7 LINE L1 -4 6150 5957 2584 73 26 2 chr10 27442378 27442949 -112873816 + L1P3 LINE L1 5023 5603 -551 511 98 49 0 chr10 27442979 27443061 -112873704 - L1MA1 LINE L1 -6 7715 7630 14882 184 37 14 chr10 27443169 27450082 -112866683 - L1MA1 LINE L1 -405 7319 14 2020 153 7 0 chr10 27450093 27450394 -112866371 - AluSq SINE Alu -10 303 1 815 266 111 74 chr10 27450938 27451423 -112865342 + MLT1J LTR MaLR 3 505 -6 576 245 86 68 chr10 27451689 27451967 -112864798 - LTR26 LTR ERV1 0 727 348 970 183 58 144 chr10 27452443 27452755 -112864010 - LTR8 LTR ERV1 -436 255 1 28322 115 25 69 chr10 27453103 27459305 -112857460 + L1PA7 LINE L1 12 5923 -231 5216 54 9 1 chr10 27459305 27459956 -112856809 + L1PA7 LINE L1 5490 6147 -7 3385 140 25 27 chr10 27460501 27461131 -112855634 + L1PB4 LINE L1 5520 6148 -8 448 259 26 99 chr10 27461641 27461873 -112854892 + MLT1I LTR MaLR 194 408 -1 1901 162 17 28 chr10 27462088 27462114 -112854651 - L1PA15 LINE L1 -17 6148 6123 1917 161 0 3 chr10 27462114 27462405 -112854360 - AluJb SINE Alu -22 290 1 1901 162 17 28 chr10 27462405 27462737 -112854028 - L1PA15 LINE L1 -42 6123 5794 2244 88 115 6 chr10 27464064 27464404 -112852361 + MER51B LTR ERV1 1 377 0 817 121 0 0 chr10 27464700 27464816 -112851949 - AluJb SINE Alu -14 298 183 256 156 0 0 chr10 27464835 27464880 -112851885 + AluJb SINE Alu 67 111 -191 * 356 231 0 0 chr10 27464877 27464955 -112851810 - AluJ/FLAM SINE Alu -233 69 1 2016 153 0 0 chr10 27465896 27466184 -112850581 - AluSx SINE Alu -24 288 1 1834 167 0 0 chr10 27467157 27467444 -112849321 - AluJb SINE Alu -25 287 1 778 228 37 5 chr10 27468851 27469042 -112847723 + L1P LINE L1 4821 5021 -1125 2375 78 0 0 chr10 27469042 27469336 -112847429 + AluY SINE Alu 1 294 -17 778 228 37 5 chr10 27469336 27469359 -112847406 + L1P LINE L1 5021 5042 -1104 244 180 20 0 chr10 27469921 27469971 -112846794 + Alu SINE Alu 2 52 -250 236 96 115 0 chr10 27469971 27470048 -112846717 + Alu SINE Alu 245 327 0 214 314 26 85 chr10 27470048 27470201 -112846564 + MIR SINE MIR 20 163 -99 402 219 36 122 chr10 27470665 27470794 -112845971 - LTR41 LTR ERVL -10 763 669 1873 157 20 16 chr10 27470794 27471100 -112845665 + AluSx SINE Alu 1 307 -5 402 219 36 122 chr10 27471100 27471248 -112845517 - LTR41 LTR ERVL -104 669 510 306 190 117 61 chr10 27471513 27471676 -112845089 - LTR41 LTR ERVL -601 172 1 237 139 0 0 chr10 27471878 27471921 -112844844 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 435 307 139 36 chr10 27472410 27472853 -112843912 - L2 LINE L2 -5 3267 2716 883 255 56 4 chr10 27473472 27473703 -112843062 + MIR SINE MIR 10 252 -10 641 330 16 33 chr10 27474230 27474496 -112842269 - MIR SINE MIR 0 262 3 349 175 63 0 chr10 27476055 27476118 -112840647 + L2 LINE L2 3242 3308 -5 1198 41 0 0 chr10 27476396 27476543 -112840222 - L1PA4 LINE L1 -4 6151 6005 245 301 231 32 chr10 27477918 27478074 -112838691 + MIR3 SINE MIR 9 195 -13 269 281 0 49 chr10 27478386 27478468 -112838297 + L2 LINE L2 3236 3313 0 1183 239 82 31 chr10 27478565 27479054 -112837711 - MER113 DNA MER1_type? -3 518 5 624 193 40 62 chr10 27480581 27480757 -112836008 - MER97a DNA MER1_type? -722 172 1 343 141 71 10 chr10 27480798 27480897 -112835868 + GA-rich Low_complexity Low_complexity 4 108 0 6311 30 6 0 chr10 27480905 27481700 -112835065 - L1P LINE L1 -1385 4761 3962 21 0 0 0 chr10 27484083 27484104 -112832661 + AT_rich Low_complexity Low_complexity 1 21 0 2265 199 97 8 chr10 27484729 27485378 -112831387 - L1M4 LINE L1 -3189 3455 2749 363 296 126 0 chr10 27485389 27485588 -112831177 + L1ME4a LINE L1 5507 5730 -391 304 274 105 0 chr10 27485601 27485725 -112831040 + L1ME4a LINE L1 5798 5934 -187 2524 72 0 0 chr10 27486292 27486599 -112830166 - AluY SINE Alu 0 311 5 2919 258 70 8 chr10 27488143 27489308 -112827457 - L1M4 LINE L1 -2789 3357 2121 805 258 97 12 chr10 27489314 27489744 -112827021 - L1M4 LINE L1 -3828 2816 2357 2374 252 128 41 chr10 27489873 27490932 -112825833 - L1M4 LINE L1 -5380 1162 12 352 329 77 18 chr10 27491594 27491764 -112825001 + MIR3 SINE MIR 9 188 -20 5015 80 30 1 chr10 27491767 27492467 -112824298 - LTR30 LTR ERV1 -2 720 1 804 251 18 0 chr10 27493355 27493518 -112823247 - MER5A DNA MER1_type 0 189 24 561 324 119 60 chr10 27493691 27494624 -112822141 - L2 LINE L2 -452 2862 1875 248 286 0 0 chr10 27495900 27495956 -112820809 + L2 LINE L2 3205 3260 -12 2231 87 0 27 chr10 27496650 27496949 -112819816 + AluSx SINE Alu 5 295 -17 24 0 0 0 chr10 27496980 27497004 -112819761 + AT_rich Low_complexity Low_complexity 1 24 0 1071 158 6 0 chr10 27498363 27498534 -112818231 + FAM SINE Alu 1 172 -3 234 0 0 0 chr10 27500162 27500188 -112816577 + (A)n Simple_repeat Simple_repeat 1 26 0 2296 113 0 0 chr10 27500622 27500923 -112815842 + AluSg SINE Alu 3 303 -7 1082 161 0 0 chr10 27500936 27501097 -112815668 + AluSg/x SINE Alu 135 295 -15 857 202 16 16 chr10 27501427 27501615 -112815150 + MER5A DNA MER1_type 2 189 0 341 151 14 0 chr10 27502071 27502144 -112814621 - L1PB3 LINE L1 0 6154 6081 1826 114 23 8 chr10 27502245 27502507 -112814258 - AluSq SINE Alu -47 266 1 21 0 0 0 chr10 27502704 27502725 -112814040 + AT_rich Low_complexity Low_complexity 1 21 0 2220 120 0 0 chr10 27503154 27503462 -112813303 - AluSc SINE Alu 0 309 2 5011 84 3 0 chr10 27503722 27504380 -112812385 + PABL_A LTR ERV1 1 660 0 212 341 100 4 chr10 27504432 27504572 -112812193 + MIR SINE MIR 47 208 -54 758 186 0 0 chr10 27505228 27505357 -112811408 + FLAM_C SINE Alu 4 132 -1 359 305 11 46 chr10 27505582 27505738 -112811027 - MIR3 SINE MIR -14 194 44 411 283 110 7 chr10 27505828 27505973 -112810792 - MIR3 SINE MIR -8 200 41 690 197 54 27 chr10 27506017 27506164 -112810601 + L3 LINE CR1 244 394 -1183 278 211 253 21 chr10 27507004 27507099 -112809666 + L3 LINE CR1 558 674 -903 314 372 41 25 chr10 27507145 27507341 -112809424 + L3 LINE CR1 1377 1575 -2 568 329 104 37 chr10 27508180 27508701 -112808064 - L2 LINE L2 -223 3049 2491 1675 163 62 3 chr10 27509139 27509427 -112807338 - AluJo SINE Alu -7 305 1 29 0 0 0 chr10 27510232 27510261 -112806504 + AT_rich Low_complexity Low_complexity 1 29 0 493 293 39 30 chr10 27511278 27511613 -112805152 + L1ME4a LINE L1 5531 5868 -253 2465 126 40 26 chr10 27511755 27512177 -112804588 + MSTA LTR MaLR 1 428 0 738 266 28 20 chr10 27512229 27512481 -112804284 - MLT2F LTR ERVL -15 648 395 248 167 0 21 chr10 27512483 27512531 -112804234 + MLT1K LTR MaLR 540 586 -2 1613 198 7 3 chr10 27513182 27513485 -112803280 + AluJo SINE Alu 2 305 -7 749 58 0 10 chr10 27513989 27514093 -112802672 + (GAAA)n Simple_repeat Simple_repeat 2 104 0 264 167 0 0 chr10 27514093 27514141 -112802624 + GA-rich Low_complexity Low_complexity 2 49 0 1049 114 12 0 chr10 27514150 27514317 -112802448 + (GAAA)n Simple_repeat Simple_repeat 1 169 0 421 252 36 0 chr10 27515142 27515281 -112801484 - L1MA10 LINE L1 -9 6325 6182 229 294 18 18 chr10 27515726 27515835 -112800930 + GA-rich Low_complexity Low_complexity 3 111 0 2806 221 118 37 chr10 27516574 27517314 -112799451 - L1ME1 LINE L1 -55 6111 5433 2761 152 35 106 chr10 27517314 27518058 -112798707 - LTR8 LTR ERV1 0 691 1 2806 221 118 37 chr10 27518058 27518113 -112798652 - L1ME1 LINE L1 -733 5433 5384 915 212 0 0 chr10 27518113 27518278 -112798487 - FRAM SINE Alu 0 166 2 2806 221 118 37 chr10 27518278 27518687 -112798078 - L1ME1 LINE L1 -782 5384 5010 2355 109 64 12 chr10 27518687 27519091 -112797674 - MSTA LTR MaLR -3 425 1 2806 221 118 37 chr10 27519091 27519675 -112797090 - L1ME1 LINE L1 -1156 5010 4161 6755 146 9 7 chr10 27519694 27521788 -112794977 - L1MA2 LINE L1 -1 7722 5620 4472 188 58 21 chr10 27521794 27523084 -112793681 - L1MA2 LINE L1 -2807 4758 3415 * 8611 120 88 4 chr10 27523076 27523818 -112792947 - L1MA2 LINE L1 -5029 2536 1858 198 0 0 0 chr10 27523818 27523840 -112792925 + (TC)n Simple_repeat Simple_repeat 2 23 0 8611 120 88 4 chr10 27523840 27524475 -112792290 - L1MA2 LINE L1 -5707 1858 1043 402 105 18 0 chr10 27524607 27524664 -112792101 - AluSg/x SINE Alu -111 189 132 1116 128 0 21 chr10 27524664 27524852 -112791913 - AluSg/x SINE Alu -8 302 119 216 129 16 32 chr10 27525004 27525066 -112791699 + CT-rich Low_complexity Low_complexity 2 62 0 216 355 16 13 chr10 27525092 27525288 -112791477 + CT-rich Low_complexity Low_complexity 1 196 0 242 254 17 34 chr10 27525463 27525581 -112791184 + CT-rich Low_complexity Low_complexity 5 120 0 321 200 46 15 chr10 27526206 27526271 -112790494 - MER20 DNA MER1_type -152 67 1 429 286 71 0 chr10 27526271 27526425 -112790340 + L1MC4a LINE L1 5737 5901 -1907 945 172 51 59 chr10 27527002 27527258 -112789507 + pTR5 LTR ERV1 1774 2027 -411 352 202 32 21 chr10 27527260 27527354 -112789411 + LTR30 LTR ERV1 548 642 -80 1755 99 152 4 chr10 27527355 27527677 -112789088 + LTR12 LTR ERV1 375 714 0 2007 112 3 17 chr10 27527681 27527988 -112788777 + AluSx SINE Alu 1 303 0 216 321 12 12 chr10 27528104 27528188 -112788577 + MIR SINE MIR 8 91 -171 369 80 0 0 chr10 27528203 27528253 -112788512 + MADE1 DNA Mariner 25 74 -6 304 269 28 28 chr10 27528261 27528369 -112788396 + MIR SINE MIR 117 224 -38 30 97 0 0 chr10 27528959 27529052 -112787713 + AT_rich Low_complexity Low_complexity 1 93 0 1580 193 3 32 chr10 27529054 27529370 -112787395 - AluJo SINE Alu -5 307 1 1498 186 43 110 chr10 27529392 27530066 -112786699 + Zaphod DNA AcHobo 816 1444 -2587 295 258 15 0 chr10 27530064 27530130 -112786635 + Zaphod DNA AcHobo 3964 4030 -1 * 2534 111 5 39 chr10 27530366 27530797 -112785968 - L1P4 LINE L1 -462 5703 5288 318 26 0 0 chr10 27531001 27531040 -112785725 + (CA)n Simple_repeat Simple_repeat 2 40 0 378 293 132 43 chr10 27531041 27531413 -112785352 + HAL1b LINE L1 410 814 -534 192 295 0 16 chr10 27531456 27531517 -112785248 - MIR SINE MIR -16 246 187 554 173 144 0 chr10 27531796 27531900 -112784865 + Tigger1 DNA MER2_type 2299 2417 -1 2363 246 61 40 chr10 27531909 27532029 -112784736 + L1M4c LINE L1 356 472 -6070 2258 77 3 7 chr10 27532029 27532316 -112784449 + AluSc SINE Alu 1 286 -23 2363 246 61 40 chr10 27532316 27532938 -112783827 + L1M4c LINE L1 472 1113 -5429 539 226 99 28 chr10 27532946 27533158 -112783607 + L1M4c LINE L1 1536 1762 -4884 291 128 0 0 chr10 27533287 27533334 -112783431 - HERVH LTR ERV1 -2067 5646 5600 8263 112 2 1 chr10 27533335 27534519 -112782246 - HERVH LTR ERV1 -2287 4242 3962 21 0 0 0 chr10 27535249 27535270 -112781495 + AT_rich Low_complexity Low_complexity 1 21 0 181 198 22 0 chr10 27535482 27535573 -112781192 + A-rich Low_complexity Low_complexity 1 93 0 417 282 61 46 chr10 27535863 27536125 -112780640 + L1M4 LINE L1 3243 3508 -2638 227 123 41 14 chr10 27536275 27536348 -112780417 + (TA)n Simple_repeat Simple_repeat 1 75 0 521 267 77 12 chr10 27536418 27536665 -112780100 + L1M4 LINE L1 3718 3979 -2167 3795 173 41 2 chr10 27536851 27537487 -112779278 - L1M1 LINE L1 -6889 676 16 4647 254 64 14 chr10 27537510 27539638 -112777127 - L1MEc LINE L1 -1998 4217 2010 2877 300 88 25 chr10 27539639 27540430 -112776335 - L1MEc LINE L1 -4432 1964 1224 1907 130 3 50 chr10 27540430 27540764 -112776001 - AluSc SINE Alu 0 309 1 2877 300 88 25 chr10 27540764 27541769 -112774996 - L1MEc LINE L1 -5172 1224 55 1068 244 46 34 chr10 27542451 27543133 -112773632 + L1M4c LINE L1 1797 2578 -4068 272 46 132 34 chr10 27543140 27543201 -112773564 - MLT2A1 LTR ERVL 0 453 388 202 108 77 0 chr10 27543293 27543358 -112773407 + (TATAA)n Simple_repeat Simple_repeat 5 74 0 2971 69 23 5 chr10 27543384 27543777 -112772988 - MLT2A1 LTR ERVL -44 400 1 4313 243 29 30 chr10 27543777 27545351 -112771414 + L1M4c LINE L1 2580 4152 -2492 1782 164 82 37 chr10 27545356 27545583 -112771182 + L1MC3 LINE L1 7358 7612 -173 2551 66 0 0 chr10 27545583 27545887 -112770878 + AluY SINE Alu 1 304 -7 1782 164 82 37 chr10 27545887 27546062 -112770703 + L1MC3 LINE L1 7612 7778 -7 1368 188 68 34 chr10 27546371 27546499 -112770266 + AluJo SINE Alu 3 125 -187 414 0 0 0 chr10 27546499 27546545 -112770220 + (TAA)n Simple_repeat Simple_repeat 2 47 0 1368 188 68 34 chr10 27546545 27546709 -112770056 + AluJo SINE Alu 125 305 -7 716 61 0 10 chr10 27546726 27546825 -112769940 + (GGAA)n Simple_repeat Simple_repeat 3 100 0 22 35 0 0 chr10 27547917 27547946 -112768819 + AT_rich Low_complexity Low_complexity 1 29 0 31 44 0 0 chr10 27549770 27549815 -112766950 + AT_rich Low_complexity Low_complexity 1 45 0 2022 128 62 0 chr10 27550172 27550460 -112766305 - AluSx SINE Alu -6 306 1 1012 184 168 76 chr10 27550761 27551156 -112765609 - MLT2B1 LTR ERVL -53 501 1 2289 108 0 3 chr10 27551756 27552082 -112764683 - AluSq SINE Alu 0 313 1 454 245 63 106 chr10 27552095 27552426 -112764339 - L2 LINE L2 -64 3249 2933 3333 305 128 30 chr10 27552470 27552591 -112764174 - L2 LINE L2 0 3313 3205 2382 106 41 52 chr10 27552591 27552959 -112763806 + THE1B LTR MaLR 1 364 0 3333 305 128 30 chr10 27552959 27554605 -112762160 - L2 LINE L2 -108 3205 1279 2271 155 19 14 chr10 27554605 27554967 -112761798 + THE1B LTR MaLR 1 364 0 3333 305 128 30 chr10 27554967 27555342 -112761423 - L2 LINE L2 -2034 1279 942 2012 159 3 0 chr10 27555351 27555659 -112761106 + AluSx SINE Alu 1 309 -3 236 360 7 4 chr10 27556059 27556222 -112760543 + C-rich Low_complexity Low_complexity 2 276 0 183 158 12 37 chr10 27556233 27556315 -112760450 + (CAG)n Simple_repeat Simple_repeat 1 80 0 754 39 0 19 chr10 27556326 27556430 -112760335 + (GAA)n Simple_repeat Simple_repeat 1 102 0 209 306 0 0 chr10 27556533 27556582 -112760183 + polypyrimidine Low_complexity Low_complexity 3 51 0 937 108 0 14 chr10 27557558 27557697 -112759068 + LTR7 LTR ERV1 312 448 -2 1581 252 72 20 chr10 27557697 27558296 -112758469 + L1M4 LINE L1 4233 4862 -1284 456 213 110 8 chr10 27558763 27558890 -112757875 + MER39B LTR ERV1 5 144 -509 830 173 7 7 chr10 27558890 27559040 -112757725 + AluSq/x SINE Alu 1 150 -163 372 157 12 12 chr10 27559070 27559153 -112757612 + GA-rich Low_complexity Low_complexity 3 85 0 1019 88 18 12 chr10 27559153 27559324 -112757441 + (GGAA)n Simple_repeat Simple_repeat 4 175 0 399 262 25 0 chr10 27559398 27559520 -112757245 + MER39B LTR ERV1 137 261 -392 837 133 0 0 chr10 27559527 27559640 -112757125 - FLAM_C SINE Alu -16 117 5 2638 129 9 14 chr10 27559652 27560071 -112756694 + MER39B LTR ERV1 232 648 -5 2203 103 3 0 chr10 27560250 27560573 -112756192 - AluSx SINE Alu 0 324 1 494 228 12 18 chr10 27561168 27561339 -112755426 + CT-rich Low_complexity Low_complexity 4 173 0 2766 116 6 0 chr10 27561350 27561712 -112755053 + THE1B LTR MaLR 1 364 0 229 218 26 0 chr10 27561724 27561802 -112754963 + CT-rich Low_complexity Low_complexity 2 81 0 3115 167 78 15 chr10 27561879 27562485 -112754280 - LTR48B LTR ERV1 0 644 1 1798 102 110 0 chr10 27562592 27562884 -112753881 - AluSx SINE Alu 0 320 1 463 248 117 7 chr10 27563103 27563248 -112753517 + MIR SINE MIR 95 255 -7 1871 169 3 0 chr10 27563366 27563662 -112753103 - AluJo SINE Alu -15 297 1 1470 141 4 4 chr10 27563736 27563963 -112752802 + L1MA4A LINE L1 6066 6292 -11 2963 82 20 5 chr10 27564443 27564835 -112751930 + L1PA10 LINE L1 5767 6164 -4 192 200 0 0 chr10 27565326 27565386 -112751379 + A-rich Low_complexity Low_complexity 1 60 0 2169 199 28 114 chr10 27565451 27566120 -112750645 - LTR9 LTR ERV1 0 612 1 351 271 7 18 chr10 27566226 27566340 -112750425 - L1ME2 LINE L1 -163 6007 5895 647 197 78 0 chr10 27566436 27566578 -112750187 + L1M4 LINE L1 4699 4851 -1295 4915 169 19 29 chr10 27566582 27567870 -112748895 - L1MB4 LINE L1 0 6180 4907 486 190 30 30 chr10 27567874 27567974 -112748791 + L1M4 LINE L1 4844 4943 -1203 1252 127 24 19 chr10 27567994 27568199 -112748566 + THE1C LTR MaLR 111 316 -59 932 98 0 8 chr10 27568199 27568322 -112748443 + AluSq/x SINE Alu 1 122 -191 222 37 0 0 chr10 27568322 27568349 -112748416 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 546 61 0 0 chr10 27568349 27568415 -112748350 + THE1C LTR MaLR 308 373 -2 2393 112 0 0 chr10 27568471 27568783 -112747982 + AluSx SINE Alu 1 312 0 4408 212 46 16 chr10 27568804 27570547 -112746218 + L1MB5 LINE L1 4364 6165 -9 525 276 16 0 chr10 27570531 27570723 -112746042 + L1M4 LINE L1 5135 5329 -817 * 1126 230 23 68 chr10 27570728 27571080 -112745685 + L1M4 LINE L1 14 349 -6193 15063 121 34 1 chr10 27571080 27573317 -112743448 + Tigger1 DNA MER2_type 1 2309 -109 1813 163 3 3 chr10 27573317 27573606 -112743159 - AluJo SINE Alu -13 299 11 243 344 200 0 chr10 27574948 27575073 -112741692 - L2 LINE L2 0 3272 3123 238 280 189 7 chr10 27575149 27575292 -112741473 - MIR3 SINE MIR -13 195 27 2646 84 55 3 chr10 27575323 27575667 -112741098 + THE1B LTR MaLR 3 364 0 940 238 14 19 chr10 27576123 27576333 -112740432 + MER63A DNA MER1_type 2 210 0 3832 100 22 0 chr10 27576537 27577038 -112739727 + MER75 DNA T2_type 1 512 -2 1307 207 78 15 chr10 27577381 27577437 -112739328 + MLT1A1 LTR MaLR 11 62 -303 4490 80 2 18 chr10 27577437 27578000 -112738765 - MER41A LTR ERV1 0 554 1 1307 207 78 15 chr10 27578000 27578277 -112738488 + MLT1A1 LTR MaLR 62 365 0 3004 120 87 4 chr10 27578452 27578912 -112737853 - MER41E LTR ERV1 0 512 15 2773 174 29 57 chr10 27579648 27580264 -112736501 + LTR9 LTR ERV1 14 612 0 183 156 0 0 chr10 27580643 27580675 -112736090 + (TG)n Simple_repeat Simple_repeat 2 33 0 216 311 155 0 chr10 27583390 27583493 -112733272 + MIR3 SINE MIR 84 202 -6 329 316 76 13 chr10 27584042 27584200 -112732565 - MIR SINE MIR -47 215 48 1570 153 96 3 chr10 27584302 27584584 -112732181 + AluSq SINE Alu 1 308 -5 1130 60 0 78 chr10 27584642 27584808 -112731957 + AluY SINE Alu 1 153 -158 2664 66 0 6 chr10 27584810 27585159 -112731606 - LTR7 LTR ERV1 -2 448 102 1792 94 64 0 chr10 27585161 27585427 -112731338 - HERVH LTR ERV1 -109 7604 7322 1348 117 42 9 chr10 27585425 27585638 -112731127 - HERVH LTR ERV1 -1894 5819 5600 * 4234 145 14 3 chr10 27585639 27586294 -112730471 - HERVH LTR ERV1 -2564 5149 4488 10327 168 61 60 chr10 27586296 27590287 -112726478 - HERVH LTR ERV1 -3720 3993 1 3417 60 0 70 chr10 27590289 27590771 -112725994 - LTR7 LTR ERV1 -2 448 1 926 117 14 0 chr10 27590794 27590939 -112725826 + AluY SINE Alu 157 303 -8 198 276 31 61 chr10 27590988 27591086 -112725679 + L2 LINE L2 3125 3219 -94 261 195 0 0 chr10 27591087 27591128 -112725637 + MER63 DNA MER1_type 1 41 -1020 229 196 43 0 chr10 27591178 27591224 -112725541 + MER63 DNA MER1_type 985 1032 -28 265 222 222 0 chr10 27591253 27591334 -112725431 + L2 LINE L2 3212 3310 -3 3102 131 9 11 chr10 27591381 27591531 -112725234 + LTR39 LTR ERV1 1 150 -633 1876 227 44 75 chr10 27591531 27592162 -112724603 - LTR9 LTR ERV1 0 612 1 3102 131 9 11 chr10 27592162 27592476 -112724289 + LTR39 LTR ERV1 150 464 -319 17180 101 24 25 chr10 27592672 27595338 -112721427 - HERVH LTR ERV1 -5051 2662 1 2872 95 92 5 chr10 27595340 27595752 -112721013 - LTR7 LTR ERV1 -2 448 1 3893 227 97 35 chr10 27595752 27597225 -112719540 - L1M4 LINE L1 -1907 4239 2675 322 133 100 0 chr10 27597231 27597291 -112719474 - MLT1B LTR MaLR 0 390 325 2213 118 10 0 chr10 27597291 27597597 -112719168 + AluSx SINE Alu 1 309 -3 481 175 50 0 chr10 27597981 27598061 -112718704 + MER2 DNA MER2_type 1 84 -261 1299 138 57 29 chr10 27598152 27598398 -112718367 + MER2 DNA MER2_type 93 345 0 2078 121 3 0 chr10 27598420 27598760 -112718005 + AluSq SINE Alu 1 341 0 2107 97 3 17 chr10 27599013 27599332 -112717433 - AluSq SINE Alu 0 315 1 1923 134 8 85 chr10 27599925 27600291 -112716474 - MER44D DNA MER2_type -1 608 1 2927 128 16 5 chr10 27600339 27600762 -112716003 + MSTA LTR MaLR 1 428 0 1543 131 29 48 chr10 27600812 27601219 -112715546 + MLT1C LTR MaLR 1 390 0 230 229 66 0 chr10 27601448 27601509 -112715256 - MIR3 SINE MIR -36 172 108 2488 114 48 11 chr10 27601672 27602023 -112714742 + THE1B LTR MaLR 1 364 0 2093 138 0 3 chr10 27602201 27602506 -112714259 + AluSc SINE Alu 1 304 -5 1759 208 54 3 chr10 27602645 27603016 -112713749 + MLT1B LTR MaLR 1 390 0 456 19 0 0 chr10 27603195 27603248 -112713517 + (CA)n Simple_repeat Simple_repeat 2 54 0 2281 183 105 19 chr10 27603721 27604186 -112712579 + MLT1D LTR MaLR 1 505 0 1584 135 15 132 chr10 27605229 27605570 -112711195 - AluJo SINE Alu -1 301 1 472 304 31 6 chr10 27606418 27606579 -112710186 + MIR SINE MIR 12 176 -86 331 73 0 0 chr10 27606705 27606746 -112710019 - MSTA LTR MaLR 0 426 386 2291 99 3 13 chr10 27606746 27607058 -112709707 + AluSc SINE Alu 1 309 0 1970 150 94 19 chr10 27607078 27607451 -112709314 - MSTA LTR MaLR -27 401 1 491 241 80 55 chr10 27608036 27608112 -112708653 - MIR SINE MIR -3 259 186 1983 115 45 3 chr10 27608112 27608398 -112708367 - AluSx SINE Alu -6 306 9 491 241 80 55 chr10 27608398 27608520 -112708245 - MIR SINE MIR -76 186 56 971 232 231 17 chr10 27608602 27608659 -112708106 - MLT1F1 LTR MaLR -8 559 516 2242 98 0 3 chr10 27608659 27608956 -112707809 + AluSc SINE Alu 4 299 -10 971 232 231 17 chr10 27608956 27609355 -112707410 - MLT1F1 LTR MaLR -51 516 1 567 128 47 0 chr10 27609527 27609613 -112707152 + FLAM_A SINE Alu 36 125 -17 1205 136 121 0 chr10 27609775 27609974 -112706791 - AluSg/x SINE Alu -5 305 83 2051 109 13 7 chr10 27610707 27611011 -112705754 + AluSx SINE Alu 1 306 -6 2261 110 0 0 chr10 27611664 27611964 -112704801 + AluSq SINE Alu 1 300 -13 1796 266 67 19 chr10 27611970 27612593 -112704172 - MER115 DNA AcHobo -40 653 1 275 219 0 41 chr10 27612942 27613015 -112703750 + L2 LINE L2 2794 2863 -451 218 122 14 54 chr10 27613195 27613269 -112703496 + (CCCCCG)n Simple_repeat Simple_repeat 5 75 0 1154 197 12 51 chr10 27613410 27613664 -112703101 + LTR39 LTR ERV1 532 775 -8 187 347 0 20 chr10 27614178 27614227 -112702538 + L2 LINE L2 3136 3183 -89 675 273 108 0 chr10 27614557 27614733 -112702032 + MIR SINE MIR 17 211 -51 1714 171 0 54 chr10 27614739 27615055 -112701710 + AluJb SINE Alu 1 299 -13 382 352 51 15 chr10 27615511 27615707 -112701058 + MIR3 SINE MIR 1 203 -5 1556 208 0 16 chr10 27615772 27616075 -112700690 - AluJo SINE Alu -14 298 1 2627 136 62 5 chr10 27616593 27616998 -112699767 - MSTA LTR MaLR 0 428 1 437 277 49 38 chr10 27617134 27617318 -112699447 - L1ME4a LINE L1 -1 6120 5935 1643 154 3 28 chr10 27617328 27617641 -112699124 - AluJo SINE Alu 0 310 5 2330 110 0 0 chr10 27617679 27617989 -112698776 - AluSx SINE Alu -2 310 1 671 260 29 65 chr10 27618029 27618138 -112698627 - L1ME4a LINE L1 -212 5909 5798 4306 157 27 10 chr10 27618138 27618832 -112697933 - MER39 LTR ERV1 -1 706 1 671 260 29 65 chr10 27618832 27619030 -112697735 - L1ME4a LINE L1 -323 5798 5613 2241 115 3 10 chr10 27621103 27621417 -112695348 - AluSx SINE Alu 0 312 1 2288 91 7 0 chr10 27622453 27622750 -112694015 - AluY SINE Alu -12 299 1 1876 128 14 27 chr10 27623449 27623745 -112693020 + AluSq SINE Alu 13 304 -9 676 141 19 19 chr10 27623759 27623915 -112692850 + GA-rich Low_complexity Low_complexity 1 156 0 359 303 74 6 chr10 27624577 27624739 -112692026 - MER5A DNA MER1_type -14 175 3 367 284 71 0 chr10 27625177 27625304 -112691461 - MIR SINE MIR -98 164 29 2250 128 3 0 chr10 27625415 27625727 -112691038 - AluSq SINE Alu 0 313 1 1617 160 34 37 chr10 27627296 27627624 -112689141 - AluJo SINE Alu 0 332 6 342 266 21 11 chr10 27628033 27628127 -112688638 + GA-rich Low_complexity Low_complexity 2 96 0 2319 166 41 37 chr10 27628193 27628276 -112688489 - L1MA4 LINE L1 -10 6290 6209 1695 153 7 24 chr10 27628276 27628564 -112688201 + AluJo SINE Alu 14 296 -16 2319 166 41 37 chr10 27628564 27628944 -112687821 - L1MA4 LINE L1 -91 6209 5825 222 227 0 0 chr10 27629603 27629647 -112687118 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 194 253 95 53 chr10 27629651 27629746 -112687019 - L2 LINE L2 -5 3267 3169 233 217 0 0 chr10 27629954 27630000 -112686765 + (TGAA)n Simple_repeat Simple_repeat 3 48 0 2289 102 0 0 chr10 27630155 27630449 -112686316 + AluSx SINE Alu 1 294 -18 1340 203 72 51 chr10 27630573 27631001 -112685764 - LTR56 LTR ERV1 0 445 9 2176 157 49 45 chr10 27632018 27632465 -112684300 - MER67A LTR ERV1 0 543 95 3140 74 14 61 chr10 27632483 27632928 -112683837 + L1PA10 LINE L1 5730 6153 -15 776 125 0 0 chr10 27632962 27633074 -112683691 - MER67A LTR ERV1 -431 112 1 666 330 13 4 chr10 27633119 27633352 -112683413 + MIR SINE MIR 28 262 0 214 127 0 36 chr10 27633732 27633787 -112682978 + (CAAAG)n Simple_repeat Simple_repeat 2 54 0 1114 308 26 13 chr10 27633789 27634166 -112682599 - MLT1I LTR MaLR -2 407 26 2817 138 30 5 chr10 27634185 27634614 -112682151 - L1PA15 LINE L1 0 6165 5726 5886 83 17 1 chr10 27635028 27635812 -112680953 - L1PA10 LINE L1 0 6168 5373 411 244 148 0 chr10 27635915 27636050 -112680715 - MLT1J LTR MaLR -349 162 8 23 0 0 0 chr10 27636187 27636210 -112680555 + AT_rich Low_complexity Low_complexity 1 23 0 579 286 84 10 chr10 27636424 27636627 -112680138 + MIR SINE MIR 32 249 -13 207 0 0 0 chr10 27636637 27636660 -112680105 + (CA)n Simple_repeat Simple_repeat 1 23 0 228 67 0 0 chr10 27636884 27636914 -112679851 + (T)n Simple_repeat Simple_repeat 1 30 0 205 229 102 81 chr10 27636974 27637092 -112679673 + MIR SINE MIR 44 120 -88 21 0 0 0 chr10 27637108 27637129 -112679636 + AT_rich Low_complexity Low_complexity 1 21 0 243 282 12 12 chr10 27638007 27638092 -112678673 - MIR SINE MIR -26 236 152 201 74 0 0 chr10 27639143 27639170 -112677595 + (CCTA)n Simple_repeat Simple_repeat 1 27 0 1704 164 4 7 chr10 27639297 27639571 -112677194 + AluJo SINE Alu 16 288 -24 1523 202 50 23 chr10 27640224 27640566 -112676199 + LTR53 LTR ERVL 3 353 -166 889 174 30 42 chr10 27640795 27640870 -112675895 - FRAM SINE Alu -149 163 89 8843 71 4 6 chr10 27640870 27641943 -112674822 + MER11C LTR ERVK 1 1071 0 889 174 30 42 chr10 27641943 27642034 -112674731 - FRAM SINE Alu -223 89 1 1035 111 0 0 chr10 27642113 27642248 -112674517 + AluSq/x SINE Alu 1 135 -177 2173 132 3 0 chr10 27642248 27642558 -112674207 + AluSx SINE Alu 1 311 -1 297 264 198 14 chr10 27642614 27642775 -112673990 + MER5A DNA MER1_type 1 177 -1 281 33 33 49 chr10 27643416 27643477 -112673288 + (TTTTA)n Simple_repeat Simple_repeat 2 61 0 1767 165 11 0 chr10 27643480 27643759 -112673006 - AluSx SINE Alu -30 282 1 224 239 0 0 chr10 27643798 27643844 -112672921 + MER5B DNA MER1_type 1 46 -132 240 219 0 0 chr10 27643880 27643921 -112672844 - MLT2B1 LTR ERVL 0 515 475 433 113 0 0 chr10 27643967 27644029 -112672736 + MADE1 DNA Mariner 1 62 -18 1472 238 92 7 chr10 27644036 27644469 -112672296 - MLT2B1 LTR ERVL -50 470 1 669 218 30 69 chr10 27644469 27644601 -112672164 + MIR SINE MIR 69 192 -70 1720 162 34 27 chr10 27644601 27644897 -112671868 + AluJb SINE Alu 1 298 -14 669 218 30 69 chr10 27644897 27644966 -112671799 + MIR SINE MIR 192 262 0 228 341 11 34 chr10 27645017 27645105 -112671660 - MER5A DNA MER1_type -98 91 6 852 321 84 26 chr10 27645143 27645716 -112671049 + Charlie7 DNA MER1_type 71 676 -1936 1514 156 4 42 chr10 27645757 27646020 -112670745 + AluJo SINE Alu 6 258 -54 315 0 0 0 chr10 27646024 27646059 -112670706 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 254 180 33 16 chr10 27646955 27647016 -112669749 - MER116 DNA Mariner 0 80 19 477 329 66 0 chr10 27647344 27647557 -112669208 + MARNA DNA Mariner 18 244 -342 1600 179 10 35 chr10 27648313 27648626 -112668139 - AluJo SINE Alu -7 305 1 718 201 8 8 chr10 27651150 27651284 -112665481 + AluJb SINE Alu 164 297 -15 1295 185 0 13 chr10 27651284 27651511 -112665254 + AluSx SINE Alu 1 224 -88 966 251 110 28 chr10 27651627 27651953 -112664812 - MLT1A1 LTR MaLR -12 353 1 739 288 88 23 chr10 27652495 27652881 -112663884 - LTR16C LTR ERVL -9 482 72 387 0 0 0 chr10 27654039 27654082 -112662683 + (A)n Simple_repeat Simple_repeat 1 43 0 392 254 45 30 chr10 27654805 27654939 -112661826 + MIR SINE MIR 109 244 -18 191 323 73 16 chr10 27655630 27655754 -112661011 + MER5A DNA MER1_type 40 170 -19 252 45 27 100 chr10 27656098 27656208 -112660557 + (TA)n Simple_repeat Simple_repeat 1 102 0 212 130 57 24 chr10 27656272 27656395 -112660370 + (TATAG)n Simple_repeat Simple_repeat 4 130 0 214 172 69 23 chr10 27656395 27656482 -112660283 + (CTATA)n Simple_repeat Simple_repeat 1 91 0 222 116 43 67 chr10 27656482 27656646 -112660119 + (TA)n Simple_repeat Simple_repeat 1 160 0 603 284 74 9 chr10 27656775 27657214 -112659551 - L2 LINE L2 -161 3152 2678 303 244 24 0 chr10 27657649 27657731 -112659034 + CT-rich Low_complexity Low_complexity 2 85 0 2094 194 35 30 chr10 27657893 27658356 -112658409 - MLT1D LTR MaLR -38 467 3 207 0 0 0 chr10 27658697 27658720 -112658045 + (A)n Simple_repeat Simple_repeat 1 23 0 321 278 19 28 chr10 27658855 27658963 -112657802 + MLT1G1 LTR MaLR 258 364 -231 2573 132 18 34 chr10 27661012 27661146 -112655619 - L1PA16 LINE L1 -13 6153 6018 2061 138 0 3 chr10 27661146 27661457 -112655308 - AluSq SINE Alu -3 310 1 2573 132 18 34 chr10 27661457 27661760 -112655005 - L1PA16 LINE L1 -148 6018 5723 899 296 157 14 chr10 27662306 27663091 -112653674 + L2 LINE L2 36 932 -2382 278 347 95 12 chr10 27663462 27663704 -112653061 - L2 LINE L2 -18 3254 2993 216 0 0 0 chr10 27664304 27664328 -112652437 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 333 62 0 0 chr10 27664327 27664375 -112652390 + (CA)n Simple_repeat Simple_repeat 1 48 0 244 205 26 39 chr10 27664582 27664660 -112652105 + (CATATA)n Simple_repeat Simple_repeat 4 80 0 2369 149 41 12 chr10 27665835 27666251 -112650514 + MSTA LTR MaLR 1 428 0 1486 196 22 10 chr10 27666261 27666573 -112650192 + MLT1B LTR MaLR 1 316 -74 216 67 0 0 chr10 27716600 27716630 -112600135 + (TTTTTG)n Simple_repeat Simple_repeat 3 32 0 673 255 109 5 chr10 27717748 27717932 -112598833 - MIR SINE MIR -6 256 54 328 390 17 0 chr10 27718082 27718200 -112598565 - L2 LINE L2 -10 3262 3143 628 248 0 0 chr10 27718387 27718508 -112598257 + FLAM_A SINE Alu 15 135 -7 274 300 20 67 chr10 27718974 27719124 -112597641 - MIR SINE MIR -74 188 46 2004 141 3 0 chr10 27719217 27719500 -112597265 + AluSx SINE Alu 1 284 -28 350 317 43 24 chr10 27719943 27720107 -112596658 + MIR SINE MIR 85 251 -11 1366 180 77 23 chr10 27721722 27722022 -112594743 + L1MC4 LINE L1 6782 7097 -945 2193 161 5 72 chr10 27722036 27722483 -112594282 + LTR9 LTR ERV1 1 417 -195 485 92 0 0 chr10 27722543 27722608 -112594157 - Alu SINE Alu -8 304 240 410 170 57 85 chr10 27722608 27722714 -112594051 + LTR9 LTR ERV1 515 779 0 2176 253 40 21 chr10 27722722 27722755 -112594010 + L1MC4 LINE L1 7266 7297 -745 4359 155 66 32 chr10 27722755 27723511 -112593254 - LTR39 LTR ERV1 -1 782 1 2176 253 40 21 chr10 27723511 27724148 -112592617 + L1MC4 LINE L1 7297 8042 0 345 314 175 11 chr10 27724286 27724560 -112592205 + L1ME4a LINE L1 5738 6056 -65 1334 233 149 20 chr10 27724790 27725280 -112591485 + LTR48B LTR ERV1 92 644 0 3000 83 92 2 chr10 27726342 27726753 -112590012 - LTR7 LTR ERV1 -2 448 1 366 284 117 12 chr10 27726773 27726935 -112589830 + MIR SINE MIR 84 262 0 856 300 163 33 chr10 27727084 27727943 -112588822 + L2 LINE L2 2358 3308 -5 668 251 70 70 chr10 27728507 27728806 -112587959 + LTR16A LTR ERVL 123 421 -29 2172 122 58 50 chr10 27728823 27729184 -112587581 + THE1B LTR MaLR 1 364 0 1823 160 39 15 chr10 27729506 27729837 -112586928 + MER44D DNA MER2_type 1 609 0 2396 125 36 23 chr10 27729852 27730237 -112586528 + MLT1B LTR MaLR 1 390 0 477 0 0 0 chr10 27730927 27730980 -112585785 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 34 24 0 0 chr10 27730980 27731021 -112585744 + AT_rich Low_complexity Low_complexity 1 41 0 5444 135 34 23 chr10 27731834 27732696 -112584069 - MER4D LTR ERV1 0 872 2 2754 117 0 14 chr10 27733030 27733399 -112583366 + THE1B LTR MaLR 1 364 0 10679 114 40 34 chr10 27733399 27734970 -112581795 + THE1B-int LTR MaLR 1 1580 0 2683 117 17 6 chr10 27734970 27735330 -112581435 + THE1B LTR MaLR 1 364 0 801 164 43 0 chr10 27736150 27736290 -112580475 - FRAM SINE Alu -30 146 1 2171 137 0 0 chr10 27736330 27736629 -112580136 - AluSx SINE Alu -13 299 1 188 268 0 0 chr10 27737460 27737501 -112579264 + MIR SINE MIR 196 236 -26 693 152 0 0 chr10 27737652 27737744 -112579021 + AluJ/FLAM SINE Alu 4 95 -217 403 241 12 0 chr10 27737744 27737906 -112578859 + (TA)n Simple_repeat Simple_repeat 1 164 0 2293 177 26 0 chr10 27738072 27738461 -112578304 - Tigger1 DNA MER2_type -2019 399 1 1046 155 0 0 chr10 27739782 27739943 -112576822 + FRAM SINE Alu 14 174 -2 3738 88 15 0 chr10 27740124 27740603 -112576162 + LTR19A LTR ERV1 1 486 0 2149 121 0 7 chr10 27742178 27742484 -112574281 - AluSx SINE Alu -8 304 1 236 314 0 0 chr10 27742602 27742688 -112574077 - L1MC4 LINE L1 -1342 6700 6615 207 0 0 0 chr10 27742742 27742765 -112574000 + (TATG)n Simple_repeat Simple_repeat 4 26 0 522 73 29 0 chr10 27743138 27743238 -112573527 - AluSg/x SINE Alu 0 312 211 1035 105 0 0 chr10 27743264 27743397 -112573368 - AluSq/x SINE Alu -179 133 1 618 178 10 0 chr10 27744009 27744110 -112572655 - U4 snRNA snRNA -1 144 43 531 140 0 90 chr10 27744151 27744251 -112572514 - FRAM SINE Alu -13 163 73 337 183 110 0 chr10 27744400 27744482 -112572283 + MIR SINE MIR 117 207 -55 2185 107 7 0 chr10 27744662 27744961 -112571804 + AluY SINE Alu 1 301 -10 4242 138 12 49 chr10 27744965 27745723 -112571042 + L1MB3 LINE L1 5444 6173 -10 345 284 0 0 chr10 27745913 27746001 -112570764 + MIR SINE MIR 60 147 -115 2278 87 0 3 chr10 27746053 27746353 -112570412 + AluY SINE Alu 1 299 -12 1594 158 3 76 chr10 27746353 27746653 -112570112 - AluJo SINE Alu -31 281 1 222 287 46 11 chr10 27746658 27746745 -112570020 + MIR SINE MIR 167 256 -6 231 175 48 0 chr10 27748734 27748797 -112567968 - HSMAR1 DNA Mariner 0 1287 1222 511 333 10 10 chr10 27748961 27749165 -112567600 - MIR SINE MIR 0 262 59 2996 159 62 18 chr10 27749244 27749742 -112567023 + MLT2B1 LTR ERVL 1 520 0 500 303 30 84 chr10 27750713 27750882 -112565883 + L2 LINE L2 2998 3142 -171 2269 95 0 31 chr10 27750882 27751199 -112565566 + AluSx SINE Alu 2 308 -4 500 303 30 84 chr10 27751199 27751362 -112565403 + L2 LINE L2 3142 3312 -1 287 317 96 36 chr10 27751609 27751776 -112564989 + MIR3 SINE MIR 4 180 -28 679 163 0 68 chr10 27751984 27752131 -112564634 - FLAM_C SINE Alu 0 143 7 2506 74 0 0 chr10 27752144 27752440 -112564325 - AluSg SINE Alu -14 296 1 1789 154 27 10 chr10 27752466 27752765 -112564000 - AluJb SINE Alu -8 304 1 225 213 66 16 chr10 27753723 27753784 -112562981 + L2 LINE L2 3250 3313 0 205 253 181 12 chr10 27754149 27754232 -112562533 + MIR SINE MIR 74 170 -92 646 115 244 17 chr10 27754763 27754899 -112561866 - AluSg/x SINE Alu -12 297 154 596 148 98 25 chr10 27754971 27755093 -112561672 + FLAM_A SINE Alu 11 141 -1 1814 176 83 13 chr10 27755096 27755597 -112561168 + LTR65 LTR ERV1 53 669 0 2256 89 3 13 chr10 27755688 27755990 -112560775 + AluSc SINE Alu 1 299 -10 1824 169 128 58 chr10 27755990 27756474 -112560291 - Charlie1b DNA MER1_type -5 518 1 2403 52 0 19 chr10 27756976 27757283 -112559482 - AluY SINE Alu -10 301 1 23 54 0 0 chr10 27759879 27759916 -112556849 + AT_rich Low_complexity Low_complexity 1 37 0 349 329 7 27 chr10 27760705 27760851 -112555914 + MIR SINE MIR 106 248 -14 634 283 42 71 chr10 27760994 27761302 -112555463 + MER102b DNA MER1_type 37 335 -6 204 238 12 75 chr10 27761430 27761510 -112555255 - MIR SINE MIR -68 194 120 332 293 233 8 chr10 27762206 27762459 -112554306 - L2 LINE L2 -339 2975 2666 556 268 182 32 chr10 27763313 27764219 -112552546 - L1MEd LINE L1 -3044 3496 2440 598 279 97 22 chr10 27764543 27764986 -112551779 - L1MEd LINE L1 -794 2107 1533 473 297 57 0 chr10 27764988 27765163 -112551602 - LTR33A LTR ERVL 0 523 339 335 318 89 38 chr10 27765216 27765452 -112551313 - LTR33A LTR ERVL -267 256 9 307 296 0 23 chr10 27765456 27765544 -112551221 - L1MEd LINE L1 -5007 1523 1438 10400 203 63 40 chr10 27765551 27765949 -112550816 - L1MB3 LINE L1 -10 6984 6597 2007 157 0 0 chr10 27765949 27766255 -112550510 - AluSx SINE Alu -6 306 1 10400 203 63 40 chr10 27766255 27767722 -112549043 - L1MB3 LINE L1 -397 6597 5166 324 0 0 0 chr10 27767722 27767758 -112549007 + (TG)n Simple_repeat Simple_repeat 1 36 0 10400 203 63 40 chr10 27767758 27770663 -112546102 - L1MB3 LINE L1 -1828 5166 1972 2403 81 3 0 chr10 27770663 27770973 -112545792 + AluY SINE Alu 1 311 0 10400 203 63 40 chr10 27770973 27771353 -112545412 - L1MB3 LINE L1 -5022 1972 1602 2442 84 3 0 chr10 27771446 27771757 -112545008 - AluSp SINE Alu 0 313 2 1169 259 39 55 chr10 27771856 27772293 -112544472 - L2 LINE L2 -8 3305 2876 210 387 63 0 chr10 27772772 27772883 -112543882 + MIR SINE MIR 20 137 -71 262 296 16 80 chr10 27773877 27774002 -112542763 - L2 LINE L2 0 3313 3197 570 256 40 0 chr10 27774016 27774141 -112542624 - L2 LINE L2 0 3313 3184 815 320 56 70 chr10 27774308 27774876 -112541889 - L2 LINE L2 -1840 1474 915 193 240 0 20 chr10 27775772 27775822 -112540943 + MIR3 SINE MIR 132 180 -28 193 327 220 13 chr10 27778085 27778244 -112538521 + MIR3 SINE MIR 15 206 -2 1408 171 13 112 chr10 27779943 27780328 -112536437 - MLT1A1 LTR MaLR 0 365 19 1679 131 11 58 chr10 27780401 27780676 -112536089 - AluSx SINE Alu -17 295 34 5550 114 12 6 chr10 27780795 27781207 -112535558 - L1PA13 LINE L1 0 6163 5755 2133 125 54 23 chr10 27781207 27781560 -112535205 + THE1B LTR MaLR 1 364 0 5550 114 12 6 chr10 27781560 27782928 -112533837 - L1PA13 LINE L1 -408 5755 4379 1893 168 6 0 chr10 27782942 27783282 -112533483 - L1PA13 LINE L1 -1702 4444 4103 291 28 0 0 chr10 27783868 27783904 -112532861 + (TG)n Simple_repeat Simple_repeat 2 37 0 499 261 39 64 chr10 27784109 27784312 -112532453 - HAL1 LINE L1 -2299 208 11 2458 124 3 8 chr10 27784470 27784841 -112531924 - Tigger2a DNA MER2_type -25 419 51 664 165 0 9 chr10 27784820 27784935 -112531830 - Tigger2a DNA MER2_type -320 114 1 * 436 252 55 0 chr10 27788196 27788323 -112528442 + L1ME1 LINE L1 6029 6162 -4 23 33 0 0 chr10 27788415 27788445 -112528320 + AT_rich Low_complexity Low_complexity 1 30 0 5579 77 17 16 chr10 27788500 27789328 -112527437 - L1M1 LINE L1 -4251 3314 2486 3999 204 21 23 chr10 27789333 27790025 -112526740 - L1M1 LINE L1 -6681 884 193 189 0 0 0 chr10 27790025 27790046 -112526719 + (TC)n Simple_repeat Simple_repeat 2 22 0 3999 204 21 23 chr10 27790046 27790226 -112526539 - L1M1 LINE L1 -7372 193 14 479 332 92 11 chr10 27790353 27790636 -112526129 - L2 LINE L2 0 3313 3008 180 336 19 37 chr10 27790720 27790827 -112525938 + MER5A DNA MER1_type 84 188 -1 1395 287 93 58 chr10 27790869 27792122 -112524643 + L1ME LINE L1 36 1331 -5065 2149 268 81 24 chr10 27792163 27792702 -112524063 + L1ME LINE L1 1390 1897 -4318 3000 171 26 16 chr10 27792702 27793023 -112523742 + MER44D DNA MER2_type 2 387 -2100 2107 84 21 14 chr10 27793023 27793309 -112523456 + AluY SINE Alu 1 288 -23 3000 171 26 16 chr10 27793309 27793531 -112523234 + MER44D DNA MER2_type 387 605 0 2149 268 81 24 chr10 27793531 27795055 -112521710 + L1ME LINE L1 1897 3631 -2584 1007 318 22 5 chr10 27795491 27795894 -112520871 - L1M4c LINE L1 -4571 2388 1979 1004 140 0 0 chr10 27795896 27796053 -112520712 - AluSg/x SINE Alu 0 312 156 3472 208 66 31 chr10 27796054 27797054 -112519711 - L1M4c LINE L1 -4983 1976 903 4576 128 6 0 chr10 27797066 27797768 -112518997 - L1P LINE L1 -1512 4634 3929 3651 107 0 0 chr10 27797767 27798309 -112518456 + L1P LINE L1 4752 5293 -853 * 413 58 0 0 chr10 27798309 27798355 -112518410 + L1PA10 LINE L1 6100 6151 -17 1387 239 63 14 chr10 27798388 27798903 -112517862 - L1M4c LINE L1 -5963 896 2 621 251 95 74 chr10 27798912 27798966 -112517799 + L1ME LINE L1 3674 3725 -2490 2603 213 78 30 chr10 27798966 27799655 -112517110 - MER72 LTR ERV1 0 722 1 621 251 95 74 chr10 27799655 27800002 -112516763 + L1ME LINE L1 3725 4080 -2135 1137 272 45 0 chr10 27800057 27800370 -112516395 + L1ME LINE L1 5456 5782 -451 1976 133 65 31 chr10 27802311 27802663 -112514102 - THE1B LTR MaLR 0 364 1 792 219 91 0 chr10 27803804 27803991 -112512774 - MER20 DNA MER1_type -2 217 14 2423 66 0 3 chr10 27804020 27804325 -112512440 + AluY SINE Alu 1 304 -7 238 250 19 0 chr10 27804461 27804513 -112512252 + L2 LINE L2 3251 3303 -10 2384 137 119 7 chr10 27804774 27805238 -112511527 - L1MC2 LINE L1 0 6344 5831 1376 211 82 22 chr10 27805339 27805841 -112510924 + L1ME1 LINE L1 4960 5485 -681 950 157 63 26 chr10 27805828 27806019 -112510746 + L1PB1 LINE L1 3 200 -6663 * 13075 101 114 16 chr10 27806019 27807321 -112509444 + L1PB1 LINE L1 634 2226 -4637 2448 66 0 7 chr10 27807321 27807622 -112509143 - AluY SINE Alu -12 299 1 13075 101 114 16 chr10 27807622 27808449 -112508316 + L1PB1 LINE L1 2226 2971 -3892 1574 199 82 3 chr10 27808457 27808773 -112507992 + LTR9B LTR ERV1 304 644 0 10875 179 20 13 chr10 27808774 27809021 -112507744 + L1PB1 LINE L1 3510 3754 -3113 2002 152 0 0 chr10 27809021 27809324 -112507441 + AluSx SINE Alu 1 303 -9 10875 179 20 13 chr10 27809324 27809454 -112507311 + L1PB1 LINE L1 3754 3882 -2985 207 0 0 0 chr10 27809454 27809477 -112507288 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 10875 179 20 13 chr10 27809477 27812438 -112504327 + L1PB1 LINE L1 3882 6867 0 26 0 0 0 chr10 27812438 27812464 -112504301 + AT_rich Low_complexity Low_complexity 1 26 0 1260 236 60 23 chr10 27812464 27812874 -112503891 + L1ME1 LINE L1 5457 5892 -278 1612 141 56 30 chr10 27813006 27813310 -112503455 - AluJo SINE Alu 0 312 1 517 230 72 0 chr10 27813604 27813743 -112503022 + MIR SINE MIR 114 262 0 39052 51 3 1 chr10 27814583 27820283 -112496482 - L1PA5 LINE L1 -7 6147 435 880 293 69 18 chr10 27821594 27821986 -112494779 + MLT1L LTR MaLR 142 553 -62 2307 74 0 3 chr10 27822955 27823263 -112493502 - AluY SINE Alu 0 307 1 738 314 69 31 chr10 27823756 27824176 -112492589 + L2 LINE L2 2311 2746 -568 365 118 0 0 chr10 27824743 27824794 -112491971 - Alu SINE Alu -8 293 243 1860 135 168 11 chr10 27824844 27825214 -112491551 - MSTA LTR MaLR 0 428 1 1743 173 0 18 chr10 27825768 27826051 -112490714 + AluJo SINE Alu 4 281 -31 1804 174 142 74 chr10 27826318 27826888 -112489877 - LTR10A LTR ERV1 0 609 1 184 356 41 0 chr10 27827016 27827089 -112489676 + L2 LINE L2 3179 3254 -18 222 337 54 36 chr10 27827109 27827275 -112489490 + MIR SINE MIR 68 236 -26 286 250 16 0 chr10 27827321 27827385 -112489380 + L2 LINE L2 3248 3312 -1 4734 207 78 23 chr10 27828375 27829701 -112487064 + L1MC4 LINE L1 6473 7904 -138 201 147 0 0 chr10 27829741 27829775 -112486990 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 20614 30 8 7 chr10 27830194 27833458 -112483307 + L1PA3 LINE L1 2886 6152 -3 195 230 69 69 chr10 27833812 27833899 -112482866 + MIR3 SINE MIR 108 194 -14 196 318 152 0 chr10 27834355 27834421 -112482344 - L3 LINE CR1 -3 1574 1499 2331 101 10 0 chr10 27834519 27834826 -112481939 - AluSg SINE Alu 0 310 1 292 270 0 45 chr10 27834860 27834949 -112481816 - MIR3 SINE MIR -40 168 84 544 158 0 21 chr10 27835082 27835177 -112481588 - AluSg/x SINE Alu -19 290 198 1698 177 0 32 chr10 27835211 27835522 -112481243 + AluJb SINE Alu 1 301 -11 9084 175 21 17 chr10 27835564 27838349 -112478416 + L1PB3 LINE L1 3369 6154 0 277 194 0 28 chr10 27838547 27838619 -112478146 - MLT2D LTR ERVL -295 119 50 271 98 0 0 chr10 27838702 27838743 -112478022 - MLT2D LTR ERVL -373 41 1 264 326 31 0 chr10 27839587 27839685 -112477080 + MIR3 SINE MIR 87 187 -21 25 65 0 0 chr10 27841636 27841682 -112475083 + AT_rich Low_complexity Low_complexity 1 46 0 42 36 0 0 chr10 27842040 27842096 -112474669 + AT_rich Low_complexity Low_complexity 1 56 0 579 242 0 0 chr10 27842727 27842855 -112473910 + MER94 DNA DNA 4 131 -3 883 229 46 29 chr10 27843036 27843276 -112473489 - L1MB8 LINE L1 -1 6177 5934 482 0 0 17 chr10 27843276 27843335 -112473430 + (TTTA)n Simple_repeat Simple_repeat 2 59 0 1513 61 0 0 chr10 27843335 27843516 -112473249 - AluY SINE Alu -24 287 107 1293 104 0 0 chr10 27843517 27843680 -112473085 - AluY SINE Alu -148 163 1 1268 183 21 7 chr10 27843680 27843948 -112472817 - L1MB8 LINE L1 -241 5913 5662 209 238 0 0 chr10 27844109 27844151 -112472614 + (TA)n Simple_repeat Simple_repeat 1 42 0 34 24 0 0 chr10 27846112 27846153 -112470612 + AT_rich Low_complexity Low_complexity 1 41 0 1622 215 24 1 chr10 27848387 27848793 -112467972 - L1PA15-16 LINE L1 -3845 3004 2591 360 319 29 91 chr10 27848853 27849094 -112467671 + L2 LINE L2 3031 3256 -16 784 331 128 20 chr10 27849451 27849856 -112466909 - L3 LINE CR1 -12 1565 1117 2159 87 4 0 chr10 27850771 27851048 -112465717 - AluY SINE Alu -17 294 17 1897 172 0 0 chr10 27851412 27851709 -112465056 - AluJb SINE Alu -15 297 1 387 270 116 21 chr10 27851725 27851958 -112464807 - L1ME4a LINE L1 -188 5933 5679 23 33 0 0 chr10 27852005 27852035 -112464730 + AT_rich Low_complexity Low_complexity 1 30 0 619 305 62 13 chr10 27852158 27852384 -112464381 - MIR SINE MIR -12 250 14 1921 237 69 14 chr10 27852690 27853180 -112463585 - LTR40a LTR ERVL 0 519 3 483 298 50 32 chr10 27853315 27853594 -112463171 - L1MEd LINE L1 -4862 1257 974 22 80 0 0 chr10 27854380 27854430 -112462335 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr10 27854796 27854817 -112461948 + AT_rich Low_complexity Low_complexity 1 21 0 598 202 18 0 chr10 27855723 27855857 -112460908 - FLAM_A SINE Alu 0 140 5 2401 78 0 3 chr10 27856399 27856705 -112460060 + AluSg SINE Alu 1 305 -5 337 355 69 16 chr10 27857045 27857127 -112459638 + L2 LINE L2 2304 2380 -934 2054 107 0 24 chr10 27857127 27857443 -112459322 - AluSg SINE Alu 0 309 1 337 355 69 16 chr10 27857443 27857548 -112459217 + L2 LINE L2 2380 2502 -812 32 26 0 0 chr10 27858886 27858925 -112457840 + AT_rich Low_complexity Low_complexity 1 39 0 301 267 119 0 chr10 27859631 27859732 -112457033 - MIR3 SINE MIR -1 207 95 2284 77 0 20 chr10 27860005 27860303 -112456462 - AluY SINE Alu -19 292 1 409 302 9 93 chr10 27861035 27861250 -112455515 + MIR SINE MIR 32 228 -34 256 296 0 0 chr10 27861306 27861360 -112455405 + L2 LINE L2 3241 3294 -19 8430 171 80 14 chr10 27861569 27861688 -112455077 - L1 LINE L1 -1161 6404 6294 1371 128 123 78 chr10 27861688 27862047 -112454718 - THE1C LTR MaLR 0 375 1 8430 171 80 14 chr10 27862047 27863086 -112453679 - L1 LINE L1 -1271 6294 5325 2032 68 0 68 chr10 27863086 27863401 -112453364 - AluSp SINE Alu 0 319 24 8430 171 80 14 chr10 27863401 27864243 -112452522 - L1 LINE L1 -2240 5325 4269 3198 122 0 4 chr10 27864249 27864739 -112452026 - MER75 DNA T2_type -24 490 3 18256 157 40 6 chr10 27864741 27865399 -112451366 - L1 LINE L1 -3280 4285 3651 216 67 0 0 chr10 27865399 27865429 -112451336 + (TTG)n Simple_repeat Simple_repeat 2 31 0 18256 157 40 6 chr10 27865429 27867214 -112449551 - L1 LINE L1 -3914 3651 1656 333 0 0 0 chr10 27867214 27867251 -112449514 + (TC)n Simple_repeat Simple_repeat 2 38 0 18256 157 40 6 chr10 27867251 27868622 -112448143 - L1 LINE L1 -5909 1656 334 450 0 0 0 chr10 27869431 27869481 -112447284 + (TAGA)n Simple_repeat Simple_repeat 1 50 0 242 114 0 0 chr10 27869518 27869553 -112447212 + MER21A LTR ERV1 34 68 -863 2224 168 133 113 chr10 27869663 27870481 -112446284 + MER21A LTR ERV1 70 904 -27 203 200 50 0 chr10 27870508 27870548 -112446217 + MER91B DNA MER1_type 36 77 -113 2505 58 0 13 chr10 27871556 27871866 -112444899 + AluY SINE Alu 1 306 -5 206 269 19 0 chr10 27872598 27872650 -112444115 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 1363 278 75 8 chr10 27872743 27873233 -112443532 - L2 LINE L2 -933 2381 1859 248 268 46 9 chr10 27873234 27873364 -112443401 + L1MD3 LINE L1 7315 7624 -356 722 293 171 10 chr10 27873386 27873731 -112443034 - L2 LINE L2 -1469 1845 1422 2328 104 13 0 chr10 27873731 27874038 -112442727 - AluY SINE Alu 0 311 1 722 293 171 10 chr10 27874038 27874102 -112442663 - L2 LINE L2 -1892 1422 1370 251 193 0 0 chr10 27874139 27874196 -112442569 + L1ME4a LINE L1 6063 6119 -2 364 98 0 7 chr10 27874282 27874346 -112442419 - Alu SINE Alu -259 49 1 186 97 75 21 chr10 27875601 27875694 -112441071 + (TA)n Simple_repeat Simple_repeat 2 99 0 902 265 15 0 chr10 27875787 27875991 -112440774 + MER58A DNA MER1_type 5 211 -13 229 246 16 0 chr10 27877243 27877304 -112439461 + (TA)n Simple_repeat Simple_repeat 2 63 0 544 281 145 42 chr10 27877405 27877608 -112439157 - L2 LINE L2 -4 3309 3128 2152 129 0 3 chr10 27877608 27877917 -112438848 + AluSg SINE Alu 1 308 -2 544 281 145 42 chr10 27877917 27878333 -112438432 - L2 LINE L2 -185 3128 2625 248 263 20 81 chr10 27878532 27878563 -112438202 + LTR33 LTR ERVL 5 36 -485 1861 206 83 15 chr10 27878563 27879034 -112437731 + MLT1D LTR MaLR 3 505 0 248 263 20 81 chr10 27879034 27879101 -112437664 + LTR33 LTR ERVL 36 97 -424 512 266 86 27 chr10 27879110 27879332 -112437433 + LTR33 LTR ERVL 221 455 -66 2185 197 66 2 chr10 27879335 27879792 -112436973 + L1MCa LINE L1 28 513 -5913 3242 186 54 14 chr10 27879830 27880592 -112436173 + L1MCa LINE L1 633 1424 -5002 4255 171 26 4 chr10 27881881 27882683 -112434082 - L1MC1 LINE L1 -5 6328 5509 3080 232 33 2 chr10 27882685 27883559 -112433206 - L1MC1 LINE L1 -1405 4741 3841 225 306 67 15 chr10 27883766 27883900 -112432865 + L2 LINE L2 3165 3305 -8 1872 100 0 16 chr10 27883938 27884040 -112432725 + AluSx SINE Alu 35 137 -168 2210 106 0 13 chr10 27884040 27884383 -112432382 + AluSp SINE Alu 1 313 0 1872 100 0 16 chr10 27884383 27884555 -112432210 + AluSx SINE Alu 137 305 0 2548 70 0 3 chr10 27884981 27885293 -112431472 - AluY SINE Alu 0 311 1 249 376 36 21 chr10 27885444 27885767 -112430998 - L2 LINE L2 -211 3061 2702 221 325 48 16 chr10 27886126 27886252 -112430513 - L2 LINE L2 0 3313 3184 2175 95 7 0 chr10 27886324 27886598 -112430167 + AluSc SINE Alu 22 297 -12 337 131 33 0 chr10 27886671 27886732 -112430033 - L1M4 LINE L1 -898 5248 5186 1009 236 7 7 chr10 27887345 27887633 -112429132 - L1M4 LINE L1 -974 5172 4885 3129 274 133 37 chr10 27887980 27889367 -112427398 - L2 LINE L2 -2 3311 2058 2240 107 3 7 chr10 27889367 27889677 -112427088 + AluSx SINE Alu 2 310 -2 3129 274 133 37 chr10 27889677 27889899 -112426866 - L2 LINE L2 -1255 2058 1859 2596 26 3 19 chr10 27889899 27890208 -112426557 + AluY SINE Alu 1 304 -7 3129 274 133 37 chr10 27890208 27890250 -112426515 - L2 LINE L2 -1454 1859 1507 362 117 0 78 chr10 27893721 27893779 -112422986 + L1ME1 LINE L1 5775 5827 -337 1501 158 21 4 chr10 27893779 27894013 -112422752 + AluJo SINE Alu 65 302 -10 362 117 0 78 chr10 27894013 27894031 -112422734 + L1ME1 LINE L1 5827 5845 -319 1878 90 7 80 chr10 27894059 27894360 -112422405 + AluY SINE Alu 1 279 -32 276 98 0 0 chr10 27894360 27894427 -112422338 + Alu SINE Alu 242 308 0 23 0 0 0 chr10 27894427 27894450 -112422315 + AT_rich Low_complexity Low_complexity 1 23 0 1187 209 36 10 chr10 27894450 27894756 -112422009 + L1ME1 LINE L1 5845 6158 -8 353 325 36 16 chr10 27895075 27895327 -112421438 - L1M4 LINE L1 -1146 5000 4744 244 87 101 0 chr10 27895345 27895414 -112421351 + (TA)n Simple_repeat Simple_repeat 1 76 0 2406 224 15 5 chr10 27895421 27896033 -112420732 - L1 LINE L1 -904 6263 5646 1762 136 3 10 chr10 27896047 27896341 -112420424 - L1PB1 LINE L1 0 6867 6576 425 109 0 70 chr10 27896343 27896610 -112420155 + (TA)n Simple_repeat Simple_repeat 1 248 0 13840 197 60 17 chr10 27896630 27902858 -112413907 - L1PB1 LINE L1 -360 6507 6 1829 154 51 2 chr10 27902883 27903293 -112413472 - L1 LINE L1 -1510 5657 5228 1082 135 81 9 chr10 27903295 27903517 -112413248 - Tigger7 DNA MER2_type 0 2491 2254 246 62 0 0 chr10 27903517 27903549 -112413216 + (TC)n Simple_repeat Simple_repeat 1 32 0 3454 162 71 3 chr10 27903551 27904198 -112412567 - Tigger7 DNA MER2_type -1755 732 42 1316 209 0 3 chr10 27904208 27904500 -112412265 - L1 LINE L1 -1941 5226 4936 3974 209 23 14 chr10 27904917 27905258 -112411507 - L1 LINE L1 -2201 4966 4630 1818 180 0 16 chr10 27905258 27905575 -112411190 - AluJo SINE Alu 0 312 1 3974 209 23 14 chr10 27905575 27906345 -112410420 - L1 LINE L1 -2537 4630 3845 1326 213 27 45 chr10 27906465 27906822 -112409943 - L1 LINE L1 -6769 399 48 1777 156 46 22 chr10 27906822 27907188 -112409577 - THE1C LTR MaLR 0 375 1 1326 213 27 45 chr10 27907188 27907234 -112409531 - L1 LINE L1 -7120 48 3 26 50 0 0 chr10 27908923 27908963 -112407802 + AT_rich Low_complexity Low_complexity 1 40 0 190 222 0 0 chr10 27909250 27909295 -112407470 - L2 LINE L2 -6 3307 3263 2220 82 10 0 chr10 27910088 27910379 -112406386 + AluY SINE Alu 1 294 -17 470 330 108 0 chr10 27910477 27910662 -112406103 + MIR SINE MIR 56 260 -2 220 205 0 0 chr10 27910702 27910741 -112406024 + L2 LINE L2 3216 3254 -18 724 287 118 11 chr10 27911529 27911938 -112404827 - LTR33 LTR ERVL -56 467 21 541 286 81 24 chr10 27912391 27912601 -112404164 - MIR SINE MIR -13 249 28 290 200 0 0 chr10 27912624 27912674 -112404091 - L2 LINE L2 0 3313 3264 218 198 55 66 chr10 27912749 27912840 -112403925 - L2 LINE L2 -1891 1423 1334 2451 65 3 0 chr10 27912950 27913243 -112403522 + AluY SINE Alu 1 294 -17 191 86 35 52 chr10 27914435 27914493 -112402272 + G-rich Low_complexity Low_complexity 4 60 0 27 29 0 0 chr10 27914650 27914684 -112402081 + AT_rich Low_complexity Low_complexity 1 34 0 229 274 177 52 chr10 27915179 27915580 -112401185 + L2 LINE L2 1980 2430 -884 2535 62 0 0 chr10 27916084 27916390 -112400375 - AluY SINE Alu -4 307 2 200 247 286 0 chr10 27917411 27917488 -112399277 - MIR3 SINE MIR 0 208 110 395 333 118 0 chr10 27917488 27917692 -112399073 + MIR SINE MIR 1 228 -34 * 570 218 109 12 chr10 27917671 27917836 -112398929 + L2 LINE L2 3127 3307 -6 233 308 192 0 chr10 27918412 27918532 -112398233 - MIR SINE MIR -10 252 110 228 281 12 0 chr10 27918569 27918651 -112398114 + (CATATA)n Simple_repeat Simple_repeat 5 87 0 1415 169 72 63 chr10 27918674 27919036 -112397729 - L1MB8 LINE L1 -1 6177 5813 39894 72 10 7 chr10 27919058 27925181 -112391584 - L1PA5 LINE L1 -3 6151 11 3079 191 32 17 chr10 27925167 27926381 -112390384 - L1MB8 LINE L1 -323 5855 4622 * 270 0 0 0 chr10 27926536 27926566 -112390199 + (CA)n Simple_repeat Simple_repeat 2 31 0 1026 316 55 25 chr10 27926630 27927267 -112389498 - L1MC4a LINE L1 -1898 5910 5255 23 68 0 0 chr10 27927486 27927530 -112389235 + AT_rich Low_complexity Low_complexity 1 44 0 403 300 50 27 chr10 27927618 27927918 -112388847 - L1MC4a LINE L1 -1314 4832 4526 22 0 0 0 chr10 27928023 27928045 -112388720 + AT_rich Low_complexity Low_complexity 1 22 0 583 282 95 25 chr10 27928090 27928615 -112388150 - L1MC4a LINE L1 -1904 4242 3681 200 253 67 27 chr10 27928743 27928818 -112387947 + MER5A DNA MER1_type 87 164 -25 2241 103 0 3 chr10 27928870 27929171 -112387594 + AluY SINE Alu 1 300 -11 399 278 99 81 chr10 27929259 27929705 -112387060 - L1MC4a LINE L1 -2703 3443 2990 1227 221 72 0 chr10 27930948 27931197 -112385568 + Tigger7 DNA MER2_type 1 267 -2220 550 168 0 40 chr10 27931196 27931297 -112385468 + Tigger7 DNA MER2_type 2490 2586 -1 * 1482 201 24 20 chr10 27932531 27932829 -112383936 - AluJo SINE Alu -11 301 3 227 175 0 0 chr10 27934262 27934302 -112382463 + CT-rich Low_complexity Low_complexity 1 40 0 2083 123 10 3 chr10 27934852 27935161 -112381604 + AluSx SINE Alu 1 311 -1 339 320 64 6 chr10 27935378 27935534 -112381231 + MIR3 SINE MIR 35 199 -9 405 348 85 0 chr10 27936379 27936497 -112380268 - L2 LINE L2 -9 3263 3136 339 403 28 17 chr10 27936649 27936937 -112379828 - L2 LINE L2 -400 2914 2624 2232 191 19 17 chr10 27937767 27938232 -112378533 - MLT1C LTR MaLR -1 466 1 1047 163 36 50 chr10 27938383 27938604 -112378161 - MER20 DNA MER1_type 0 219 2 6344 64 5 23 chr10 27938990 27939859 -112376906 - L1PA13 LINE L1 -11 6152 5300 671 275 122 59 chr10 27940019 27940294 -112376471 + L2 LINE L2 2489 2745 -568 2237 100 0 7 chr10 27940294 27940594 -112376171 - AluSx SINE Alu -14 298 1 671 275 122 59 chr10 27940594 27941091 -112375674 + L2 LINE L2 2745 3294 -19 1531 173 20 39 chr10 27941536 27941842 -112374923 + AluJo SINE Alu 1 300 -12 204 278 11 100 chr10 27942098 27942188 -112374577 - L2 LINE L2 -7 3306 3225 2164 92 0 4 chr10 27943144 27943417 -112373348 + AluSx SINE Alu 15 286 -26 345 372 28 0 chr10 27944148 27944293 -112372472 + L2 LINE L2 2531 2679 -635 225 154 0 0 chr10 27944362 27944401 -112372364 + CT-rich Low_complexity Low_complexity 3 41 0 244 268 141 0 chr10 27944489 27944560 -112372205 + L2 LINE L2 3191 3271 -1 441 330 125 47 chr10 27944567 27945122 -112371643 + L1M4 LINE L1 4778 5403 -743 2332 93 0 0 chr10 27945307 27945618 -112371147 + AluY SINE Alu 1 311 0 1465 158 0 20 chr10 27945627 27945873 -112370892 + AluJo SINE Alu 64 304 -8 346 300 0 0 chr10 27948650 27948740 -112368025 + MIR3 SINE MIR 65 154 -54 208 291 0 0 chr10 27948925 27948980 -112367785 + MIR3 SINE MIR 151 205 -3 42 71 0 0 chr10 27949418 27949502 -112367263 + AT_rich Low_complexity Low_complexity 1 84 0 1794 157 0 20 chr10 27951773 27952073 -112364692 - AluJb SINE Alu -18 294 1 949 213 0 0 chr10 27955259 27955428 -112361337 - FRAM SINE Alu -15 161 1 593 188 13 34 chr10 27956180 27956329 -112360436 + L1MC4 LINE L1 7897 8042 0 224 293 85 37 chr10 27956766 27956848 -112359917 - MIR SINE MIR -104 104 19 32 43 0 0 chr10 27957007 27957053 -112359712 + AT_rich Low_complexity Low_complexity 1 46 0 2117 104 33 3 chr10 27957357 27957656 -112359109 + AluSq SINE Alu 3 310 -3 2026 132 7 7 chr10 27958398 27958702 -112358063 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr10 27958757 27958778 -112357987 + AT_rich Low_complexity Low_complexity 1 21 0 3347 120 92 21 chr10 27958947 27960003 -112356762 + MER11A LTR ERVK 1 1236 0 23 39 0 39 chr10 27960886 27960910 -112355855 + AT_rich Low_complexity Low_complexity 1 24 -26 1900 102 8 16 chr10 27960910 27961165 -112355600 - AluSp SINE Alu -24 289 37 23 39 0 39 chr10 27961165 27961192 -112355573 + AT_rich Low_complexity Low_complexity 24 50 0 1611 137 67 39 chr10 27961272 27961556 -112355209 + AluSx SINE Alu 1 292 -20 198 172 276 0 chr10 27961727 27961785 -112354980 - L2 LINE L2 -251 3062 2989 2420 97 0 3 chr10 27962064 27962374 -112354391 + AluSx SINE Alu 1 309 -3 212 0 36 0 chr10 27962812 27962840 -112353925 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2113 105 0 0 chr10 27962842 27963119 -112353646 - AluY SINE Alu -29 282 6 343 264 76 36 chr10 27964468 27964632 -112352133 - MIR SINE MIR -61 147 4 2340 87 0 0 chr10 27964946 27965235 -112351530 + AluSx SINE Alu 1 289 -23 199 245 20 0 chr10 27965745 27965794 -112350971 - L3b LINE CR1 -5 1578 1529 1005 161 21 32 chr10 27966645 27966791 -112349974 + MER5A DNA MER1_type 1 146 -43 2371 88 0 10 chr10 27966791 27967096 -112349669 + AluSq SINE Alu 1 302 -11 1005 161 21 32 chr10 27967096 27967135 -112349630 + MER5A DNA MER1_type 146 184 -5 1314 177 56 76 chr10 27968265 27968661 -112348104 - MLT1B LTR MaLR -2 388 1 872 133 0 0 chr10 27968728 27968848 -112347917 + FLAM_C SINE Alu 1 120 -13 245 250 0 0 chr10 27969245 27969309 -112347456 + (ATG)n Simple_repeat Simple_repeat 2 65 0 490 231 21 7 chr10 27970124 27970135 -112346630 - L1MA10 LINE L1 -2 6332 6322 339 284 47 18 chr10 27970135 27970304 -112346461 - L1ME1 LINE L1 -4 6162 5989 2852 203 43 75 chr10 27970312 27971302 -112345463 - L1MDa LINE L1 -1222 5318 4362 2286 123 0 0 chr10 27971302 27971611 -112345154 - AluSx SINE Alu -3 309 1 2852 203 43 75 chr10 27971611 27971677 -112345088 - L1MDa LINE L1 -2178 4362 4295 1753 139 232 29 chr10 27971700 27972105 -112344660 - L1MA8 LINE L1 -2 6289 5767 252 0 0 0 chr10 27972105 27972133 -112344632 + (TG)n Simple_repeat Simple_repeat 2 29 0 1753 139 232 29 chr10 27972133 27972215 -112344550 - L1MA8 LINE L1 -524 5767 5703 3779 237 113 12 chr10 27972247 27973810 -112342955 - L1MDa LINE L1 -2327 4213 2475 803 229 33 17 chr10 27973821 27974061 -112342704 - L1MDa LINE L1 -6117 604 361 433 257 164 33 chr10 27974323 27974506 -112342259 - MIR SINE MIR 0 262 56 419 286 106 25 chr10 27975214 27975413 -112341352 - MIR SINE MIR -28 234 20 2178 123 7 3 chr10 27976245 27976555 -112340210 - AluSx SINE Alu -1 311 1 1235 115 5 0 chr10 27978765 27978956 -112337809 - L1PA13 LINE L1 -3 6160 5969 253 290 111 44 chr10 27979796 27979896 -112336869 + MIR SINE MIR 3 95 -167 1285 122 0 80 chr10 27979896 27980134 -112336631 + MER20 DNA MER1_type 1 219 0 253 290 111 44 chr10 27980134 27980218 -112336547 + MIR SINE MIR 95 195 -67 2372 87 0 10 chr10 27980320 27980630 -112336135 - AluY SINE Alu -4 307 1 22 0 0 0 chr10 27980735 27980757 -112336008 + AT_rich Low_complexity Low_complexity 1 22 0 2136 79 61 0 chr10 27981085 27981365 -112335400 - AluY SINE Alu -14 297 1 2413 61 0 61 chr10 27981424 27981754 -112335011 - AluY SINE Alu -1 310 1 1527 171 19 26 chr10 27982481 27982750 -112334015 + AluJo SINE Alu 46 312 0 602 265 14 62 chr10 27983580 27983791 -112332974 + MIR SINE MIR 3 203 -59 25 0 0 0 chr10 27983833 27983858 -112332907 + AT_rich Low_complexity Low_complexity 1 25 0 183 263 0 35 chr10 27983974 27984031 -112332734 - L2 LINE L2 -2 3270 3216 298 232 37 49 chr10 27984195 27984277 -112332488 + L2 LINE L2 3232 3312 -1 251 340 172 36 chr10 27985384 27986954 -112329811 - L2 LINE L2 -557 2757 975 196 327 139 0 chr10 27987191 27987292 -112329473 - MIR3 SINE MIR -36 172 58 760 218 42 0 chr10 27988458 27988623 -112328142 + AluJo SINE Alu 120 291 -21 247 211 211 0 chr10 27990261 27990337 -112326428 + L2 LINE L2 3160 3251 -21 493 265 15 0 chr10 27991577 27991709 -112325056 + MER112 DNA MER1_type 123 256 -4 668 216 125 26 chr10 27991862 27992126 -112324639 + MER46C DNA MER2_type 10 299 -39 234 358 11 11 chr10 27997401 27997496 -112319269 + MIR3 SINE MIR 78 172 -36 2527 44 0 0 chr10 27998090 27998386 -112318379 + AluY SINE Alu 1 296 -15 1827 116 0 4 chr10 28000408 28000659 -112316106 + AluSx SINE Alu 62 311 -1 1966 86 52 0 chr10 28000868 28001164 -112315601 - AluY SINE Alu 0 310 1 2301 109 0 13 chr10 28001167 28001480 -112315285 - AluSq SINE Alu -4 309 1 1024 131 171 0 chr10 28001480 28001679 -112315086 + MER6 DNA MER2_type 633 865 0 2219 94 0 3 chr10 28001924 28002212 -112314553 - AluSx SINE Alu -25 287 1 611 312 52 52 chr10 28002267 28002674 -112314091 + L1ME LINE L1 3814 4220 -1926 373 325 173 28 chr10 28002763 28003225 -112313540 + L1ME LINE L1 4370 4898 -1248 461 305 106 39 chr10 28003426 28003960 -112312805 + L1ME LINE L1 5122 5691 -430 275 205 48 0 chr10 28003978 28004061 -112312704 + L1ME LINE L1 5751 5837 -284 22 0 0 0 chr10 28004726 28004748 -112312017 + AT_rich Low_complexity Low_complexity 1 22 0 2561 55 3 0 chr10 28005320 28005628 -112311137 + AluY SINE Alu 1 309 -2 698 168 25 0 chr10 28006020 28006139 -112310626 + FLAM_A SINE Alu 4 125 -8 2355 116 0 0 chr10 28007407 28007717 -112309048 - AluSx SINE Alu -2 310 1 508 294 105 33 chr10 28007946 28008341 -112308424 - L1MC4a LINE L1 -302 5819 5459 2458 80 0 0 chr10 28008341 28008643 -112308122 - AluY SINE Alu -9 302 1 508 294 105 33 chr10 28008643 28008853 -112307912 - L1MC4a LINE L1 -662 5459 5265 339 283 137 53 chr10 28008857 28009179 -112307586 - L1MC4a LINE L1 -886 5260 4912 1238 140 72 0 chr10 28009372 28009565 -112307200 - MLT1B LTR MaLR 0 390 184 7822 30 7 1 chr10 28009568 28011145 -112305620 - L1PA4 LINE L1 0 6155 4574 1067 24 0 0 chr10 28011145 28011268 -112305497 + L1PA4 LINE L1 4464 4586 -1560 1316 116 26 0 chr10 28011268 28011458 -112305307 - MLT1B LTR MaLR -195 195 1 2189 123 10 0 chr10 28011861 28012170 -112304595 + AluSx SINE Alu 1 312 0 194 352 64 59 chr10 28012202 28012438 -112304327 - L2 LINE L2 -668 2646 2410 238 330 66 19 chr10 28012657 28012763 -112304002 - L2 LINE L2 -24 3289 3179 319 115 0 0 chr10 28012860 28012912 -112303853 + MADE1 DNA Mariner 29 80 0 22 35 0 0 chr10 28013880 28013909 -112302856 + AT_rich Low_complexity Low_complexity 1 29 0 192 77 0 0 chr10 28014698 28014724 -112302041 + (TCCC)n Simple_repeat Simple_repeat 1 26 0 2270 117 3 7 chr10 28014724 28015032 -112301733 - AluSq SINE Alu -6 307 1 230 347 129 35 chr10 28016018 28016554 -112300211 + L2 LINE L2 2384 2969 -345 262 254 28 0 chr10 28016936 28017007 -112299758 + (CATA)n Simple_repeat Simple_repeat 3 75 0 313 185 204 9 chr10 28017021 28017129 -112299636 - L1MB8 LINE L1 -7 6171 6043 201 260 0 0 chr10 28017408 28017458 -112299307 + CT-rich Low_complexity Low_complexity 2 51 0 21 0 0 0 chr10 28021416 28021437 -112295328 + GC_rich Low_complexity Low_complexity 1 21 0 333 0 0 0 chr10 28022076 28022113 -112294652 + (CA)n Simple_repeat Simple_repeat 1 37 0 22 35 0 0 chr10 28022843 28022872 -112293893 + AT_rich Low_complexity Low_complexity 1 29 0 315 71 0 0 chr10 28027211 28027253 -112289512 + (TG)n Simple_repeat Simple_repeat 2 43 0 2031 117 0 0 chr10 28030516 28030782 -112285983 - AluSx SINE Alu -11 301 36 849 198 75 16 chr10 28031088 28031275 -112285490 + MER20 DNA MER1_type 7 204 -15 1997 129 0 72 chr10 28032048 28032411 -112284354 + MER1B DNA MER1_type 1 337 0 2321 99 0 13 chr10 28032432 28032735 -112284030 + AluSx SINE Alu 1 299 -13 1083 190 57 14 chr10 28033501 28033712 -112283053 + AluJb SINE Alu 83 302 -10 187 98 0 49 chr10 28033765 28033806 -112282959 + (GGGAA)n Simple_repeat Simple_repeat 4 42 0 1596 178 7 22 chr10 28033950 28034249 -112282516 - AluJo SINE Alu 0 305 11 2089 118 3 10 chr10 28034332 28034629 -112282136 + AluSq SINE Alu 3 297 -16 244 200 0 0 chr10 28034870 28034920 -112281845 + (TG)n Simple_repeat Simple_repeat 2 51 0 1726 185 150 70 chr10 28035134 28035594 -112281171 - MLT1D LTR MaLR -4 501 5 2039 100 0 85 chr10 28035994 28036325 -112280440 - AluSx SINE Alu -7 305 3 300 264 81 47 chr10 28036556 28036704 -112280061 - MIR SINE MIR -27 235 83 2434 80 6 10 chr10 28037566 28037879 -112278886 + AluSq SINE Alu 1 312 -1 338 286 10 0 chr10 28037881 28037979 -112278786 - MIR SINE MIR -59 149 51 618 319 5 14 chr10 28038080 28038290 -112278475 + MIR SINE MIR 23 230 -32 2309 101 0 3 chr10 28038402 28038698 -112278067 - AluSx SINE Alu -17 295 1 327 224 40 0 chr10 28039130 28039206 -112277559 - L3 LINE CR1 -3 1574 1496 944 168 7 0 chr10 28039639 28039794 -112276971 - FRAM SINE Alu -13 163 8 2412 105 0 0 chr10 28039812 28040125 -112276640 - AluSq SINE Alu 0 313 1 257 295 41 16 chr10 28040898 28041020 -112275745 + MIR SINE MIR 126 250 -12 2026 114 22 0 chr10 28041250 28041523 -112275242 + AluSx SINE Alu 1 279 -33 417 20 0 0 chr10 28041523 28041573 -112275192 + (CA)n Simple_repeat Simple_repeat 1 50 0 478 149 0 10 chr10 28042701 28042788 -112273977 - L1MB8 LINE L1 -220 5958 5876 233 200 0 0 chr10 28043487 28043532 -112273233 + L2 LINE L2 3267 3311 -2 1055 168 25 0 chr10 28044364 28044561 -112272204 - L1MA4 LINE L1 0 6300 6099 2075 176 124 0 chr10 28044600 28045010 -112271755 - LOR1b LTR ERV1 0 461 1 2190 104 3 7 chr10 28045143 28045431 -112271334 - AluSq SINE Alu -26 287 1 198 286 31 61 chr10 28045452 28045550 -112271215 + L2 LINE L2 3158 3252 -61 1686 173 0 53 chr10 28046836 28047159 -112269606 + AluJb SINE Alu 1 306 -6 29 70 0 0 chr10 28048643 28048700 -112268065 + AT_rich Low_complexity Low_complexity 1 57 0 2523 39 0 32 chr10 28048964 28049272 -112267493 + AluY SINE Alu 1 298 -13 330 311 0 30 chr10 28050839 28050974 -112265791 - MER94 DNA DNA 0 134 4 477 314 78 12 chr10 28051384 28051629 -112265136 + MIR SINE MIR 1 261 -1 418 258 107 31 chr10 28051734 28051893 -112264872 - MIR3 SINE MIR -34 174 4 554 259 161 10 chr10 28052068 28052273 -112264492 - MIR SINE MIR -15 247 12 5462 130 26 70 chr10 28052692 28053170 -112263595 - L1MA8 LINE L1 -3 6288 5791 2582 67 0 10 chr10 28053170 28053484 -112263281 - AluY SINE Alu 0 311 1 5462 130 26 70 chr10 28053484 28053631 -112263134 - L1MA8 LINE L1 -500 5791 5639 2226 112 7 0 chr10 28053631 28053926 -112262839 - AluSx SINE Alu -15 297 1 5462 130 26 70 chr10 28053926 28053987 -112262778 - L1MA8 LINE L1 -652 5639 5577 2262 99 0 0 chr10 28053987 28054314 -112262451 - AluSx SINE Alu 0 327 1 5462 130 26 70 chr10 28054314 28055642 -112261123 - L1MA8 LINE L1 -714 5577 4342 222 307 223 18 chr10 28055978 28056144 -112260621 + MIR SINE MIR 47 246 -16 2592 255 130 54 chr10 28056395 28057378 -112259387 + L2 LINE L2 1036 1943 -1370 1661 160 0 32 chr10 28057378 28057660 -112259105 + AluJb SINE Alu 1 273 -39 2592 255 130 54 chr10 28057660 28058539 -112258226 + L2 LINE L2 1943 3146 -167 210 71 0 0 chr10 28058539 28058567 -112258198 + (CA)n Simple_repeat Simple_repeat 2 29 0 2592 255 130 54 chr10 28058567 28058749 -112258016 + L2 LINE L2 3146 3313 0 206 220 17 85 chr10 28060815 28060874 -112255891 - MIR3 SINE MIR -23 185 131 21 0 0 0 chr10 28065456 28065477 -112251288 + GC_rich Low_complexity Low_complexity 1 21 0 423 0 0 0 chr10 28066116 28066163 -112250602 + (CA)n Simple_repeat Simple_repeat 1 47 0 22 35 0 0 chr10 28066893 28066922 -112249843 + AT_rich Low_complexity Low_complexity 1 29 0 315 71 0 0 chr10 28071261 28071303 -112245462 + (TG)n Simple_repeat Simple_repeat 2 43 0 1919 117 0 0 chr10 28074566 28074832 -112241933 - AluSx SINE Alu -11 301 36 858 198 75 16 chr10 28075138 28075325 -112241440 + MER20 DNA MER1_type 7 204 -15 2019 129 0 72 chr10 28076098 28076461 -112240304 + MER1B DNA MER1_type 1 337 0 2195 99 0 13 chr10 28076482 28076785 -112239980 + AluSx SINE Alu 1 299 -13 1008 190 57 14 chr10 28077551 28077762 -112239003 + AluJb SINE Alu 83 302 -10 187 98 0 49 chr10 28077815 28077856 -112238909 + (GGGAA)n Simple_repeat Simple_repeat 4 42 0 216 0 0 0 chr10 28078000 28078024 -112238741 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1485 178 0 22 chr10 28078030 28078299 -112238466 - AluJo SINE Alu -39 273 11 1964 118 3 10 chr10 28078382 28078679 -112238086 + AluSq SINE Alu 3 297 -16 244 200 0 0 chr10 28078920 28078970 -112237795 + (TG)n Simple_repeat Simple_repeat 2 51 0 1734 185 150 70 chr10 28079184 28079644 -112237121 - MLT1D LTR MaLR -4 501 5 1913 100 0 85 chr10 28080044 28080375 -112236390 - AluSx SINE Alu -7 305 3 364 264 81 47 chr10 28080606 28080754 -112236011 - MIR SINE MIR -27 235 83 2306 80 6 10 chr10 28081616 28081929 -112234836 + AluSq SINE Alu 1 312 -1 378 279 23 45 chr10 28081931 28082063 -112234702 - MIR SINE MIR -59 149 20 707 319 5 14 chr10 28082130 28082340 -112234425 + MIR SINE MIR 23 230 -32 2179 101 0 3 chr10 28082452 28082748 -112234017 - AluSx SINE Alu -17 295 1 356 224 40 0 chr10 28083180 28083256 -112233509 - L3 LINE CR1 -3 1574 1496 886 168 7 0 chr10 28083689 28083844 -112232921 - FRAM SINE Alu -13 163 8 2291 105 0 0 chr10 28083862 28084175 -112232590 - AluSq SINE Alu 0 313 1 213 312 11 11 chr10 28084661 28084754 -112232011 - L2 LINE L2 -39 3274 3182 314 295 41 16 chr10 28084948 28085070 -112231695 + MIR SINE MIR 126 250 -12 1907 114 22 0 chr10 28085300 28085573 -112231192 + AluSx SINE Alu 1 279 -33 417 20 0 0 chr10 28085573 28085623 -112231142 + (CA)n Simple_repeat Simple_repeat 1 50 0 200 238 0 79 chr10 28087148 28087211 -112229554 - L2 LINE L2 -87 3226 3169 641 354 23 4 chr10 28087237 28087497 -112229268 - L2 LINE L2 -223 3090 2826 31 26 0 0 chr10 28087926 28087964 -112228801 + AT_rich Low_complexity Low_complexity 1 38 0 1673 147 0 0 chr10 28088062 28088321 -112228444 + AluSx SINE Alu 39 297 -15 2254 62 0 36 chr10 28088328 28088633 -112228132 + AluY SINE Alu 5 298 -13 305 309 98 0 chr10 28088826 28088949 -112227816 - L3 LINE CR1 -140 1437 1303 2259 52 0 21 chr10 28089544 28089860 -112226905 - AluY SINE Alu 0 310 1 310 293 7 71 chr10 28089914 28090054 -112226711 - L3 LINE CR1 -404 1173 1043 4695 144 20 45 chr10 28091588 28092444 -112224321 + L1MB3 LINE L1 5287 6163 -20 2312 102 0 3 chr10 28092444 28092758 -112224007 + AluSq SINE Alu 1 313 0 1537 39 10 34 chr10 28092761 28092967 -112223798 + L1PA10 LINE L1 5968 6168 0 4695 144 20 45 chr10 28092967 28093017 -112223748 + L1MB3 LINE L1 6165 6174 -9 2166 87 7 20 chr10 28093017 28093316 -112223449 - AluSq SINE Alu -18 295 1 195 321 56 51 chr10 28094371 28094543 -112222222 - L2 LINE L2 -162 3110 2935 3901 77 71 6 chr10 28094543 28095063 -112221702 - MER41A LTR ERV1 0 554 1 195 321 56 51 chr10 28095063 28095086 -112221679 - L2 LINE L2 -337 2935 2914 2319 99 0 0 chr10 28095188 28095500 -112221265 + AluSx SINE Alu 1 312 0 4341 149 65 11 chr10 28095538 28096281 -112220484 - LTR39 LTR ERV1 0 783 1 1822 96 4 0 chr10 28096658 28096909 -112219856 - AluSx SINE Alu -32 280 29 1342 184 79 18 chr10 28097604 28097881 -112218884 - AluJo SINE Alu -7 295 2 2106 88 6 64 chr10 28098443 28098773 -112217992 - AluY SINE Alu 0 311 1 693 278 110 0 chr10 28098917 28099090 -112217675 + MIR SINE MIR 29 220 -42 295 260 58 10 chr10 28099236 28099340 -112217425 - L1ME LINE L1 -492 5629 5521 2192 105 0 26 chr10 28099913 28100226 -112216539 - AluSx SINE Alu -7 305 1 2063 111 3 10 chr10 28100235 28100533 -112216232 - AluSp SINE Alu -17 296 1 24 32 0 0 chr10 28100679 28100710 -112216055 + AT_rich Low_complexity Low_complexity 1 31 0 1819 96 15 165 chr10 28101446 28101618 -112215147 - MER1B DNA MER1_type -2377 335 253 1772 109 4 0 chr10 28101618 28101875 -112214890 - AluSx SINE Alu -17 295 38 1819 96 15 165 chr10 28101875 28102096 -112214669 - MER1B DNA MER1_type -2459 253 1 1052 287 208 21 chr10 28102176 28103227 -112213538 - L2 LINE L2 -502 2812 1565 411 83 0 0 chr10 28103236 28103296 -112213469 + (GGAA)n Simple_repeat Simple_repeat 1 60 0 200 291 0 0 chr10 28103552 28103607 -112213158 - L3b LINE CR1 0 1583 1529 3405 188 52 87 chr10 28103619 28104644 -112212121 - L1MC4 LINE L1 -1 8041 7053 2057 119 3 0 chr10 28104671 28104966 -112211799 + AluSx SINE Alu 1 296 -16 312 204 0 91 chr10 28105648 28105736 -112211029 - MIR SINE MIR 0 262 183 194 306 20 0 chr10 28105848 28105897 -112210868 - MIR SINE MIR -165 97 48 4373 165 39 42 chr10 28105936 28106388 -112210377 - L1MB3 LINE L1 -2 6181 5729 2172 115 0 13 chr10 28106388 28106693 -112210072 - AluSx SINE Alu -11 301 1 4373 165 39 42 chr10 28106693 28107457 -112209308 - L1MB3 LINE L1 -454 5729 4976 428 292 99 60 chr10 28107639 28107923 -112208842 - L1ME4a LINE L1 -178 5943 5632 2107 101 7 0 chr10 28107923 28108219 -112208546 + AluSx SINE Alu 1 298 -14 428 292 99 60 chr10 28108219 28108410 -112208355 - L1ME4a LINE L1 -489 5632 5450 917 83 8 30 chr10 28108471 28108604 -112208161 - L1MA1 LINE L1 -1 6301 6172 411 292 152 25 chr10 28108669 28108946 -112207819 - L1ME4a LINE L1 -893 5253 4942 872 230 9 14 chr10 28108975 28109188 -112207577 - L1MB3 LINE L1 -2500 3646 3435 229 352 55 0 chr10 28109192 28109320 -112207445 - L1ME4a LINE L1 -2061 4085 3951 266 250 0 16 chr10 28109323 28109387 -112207378 + CT-rich Low_complexity Low_complexity 2 64 0 288 291 124 37 chr10 28109388 28110369 -112206396 - L1ME4a LINE L1 -2201 3945 2879 244 323 75 11 chr10 28111527 28111620 -112205145 + MIR SINE MIR 9 107 -155 317 288 138 25 chr10 28111680 28111840 -112204925 - MIR SINE MIR -10 252 75 2304 67 13 10 chr10 28111888 28112186 -112204579 - AluY SINE Alu -12 299 1 2300 101 0 3 chr10 28112781 28113078 -112203687 - AluSc SINE Alu -13 296 1 223 311 0 0 chr10 28113617 28113691 -112203074 + MER5A DNA MER1_type 7 80 -109 465 250 66 40 chr10 28113693 28113845 -112202920 + L2 LINE L2 3158 3313 0 319 269 83 9 chr10 28113843 28113951 -112202814 + MER5A DNA MER1_type 71 186 -3 * 196 250 0 0 chr10 28114093 28114141 -112202624 - L2 LINE L2 -4 3309 3262 304 198 71 0 chr10 28114500 28114579 -112202186 + MIR3 SINE MIR 74 159 -49 587 254 111 29 chr10 28115270 28115550 -112201215 - MER20B DNA MER1_type 0 783 481 236 180 0 40 chr10 28115591 28115641 -112201124 - MER20B DNA MER1_type -669 114 67 2648 47 0 0 chr10 28115762 28116061 -112200704 + AluY SINE Alu 1 299 -12 208 232 87 14 chr10 28119003 28119072 -112197693 + MER5C DNA MER1_type 2 75 -249 2261 114 0 0 chr10 28119337 28119635 -112197130 - AluSx SINE Alu -14 298 1 2428 99 0 0 chr10 28120157 28120461 -112196304 + AluSq SINE Alu 1 304 -9 21 0 0 0 chr10 28121670 28121691 -112195074 + AT_rich Low_complexity Low_complexity 1 21 0 1490 145 58 58 chr10 28123455 28123765 -112193000 + AluJo SINE Alu 1 310 -2 2252 108 3 19 chr10 28123946 28124262 -112192503 - AluSx SINE Alu -1 311 1 192 370 58 35 chr10 28124452 28124625 -112192140 - L2 LINE L2 -21 3251 3075 21 0 0 0 chr10 28125565 28125586 -112191179 + AT_rich Low_complexity Low_complexity 1 21 0 664 226 198 19 chr10 28125935 28126147 -112190618 - MIR SINE MIR -3 259 10 231 333 42 10 chr10 28126847 28126943 -112189822 - L2 LINE L2 -256 3016 2918 24 0 0 0 chr10 28127211 28127235 -112189530 + AT_rich Low_complexity Low_complexity 1 24 0 1810 151 169 20 chr10 28127802 28128152 -112188613 - MER4A LTR ERV1 0 664 263 614 103 21 10 chr10 28128152 28128249 -112188516 - MER4A LTR ERV1 -566 98 1 950 149 0 0 chr10 28128291 28128439 -112188326 + L1PB4 LINE L1 5996 6143 -13 29 0 0 0 chr10 28128439 28128468 -112188297 + AT_rich Low_complexity Low_complexity 1 29 0 863 271 72 11 chr10 28128738 28129015 -112187750 - HAL1 LINE L1 -1796 711 418 2077 148 0 0 chr10 28129521 28129818 -112186947 - AluSx SINE Alu -15 297 1 645 256 136 55 chr10 28129853 28130346 -112186419 - L1ME4a LINE L1 -1 6120 5588 300 283 192 11 chr10 28130354 28130531 -112186234 - L3 LINE CR1 -872 705 497 802 321 97 82 chr10 28130591 28131720 -112185045 + L3 LINE CR1 429 1574 -3 295 305 40 20 chr10 28131807 28131958 -112184807 + MER103 DNA DNA 11 164 -2 2363 86 7 7 chr10 28132140 28132444 -112184321 - AluY SINE Alu -7 304 1 2941 118 7 16 chr10 28134929 28135378 -112181387 - MER65A LTR ERV1 0 445 1 896 97 0 0 chr10 28137369 28137482 -112179283 - AluSg/x SINE Alu -13 297 185 21 0 0 0 chr10 28137734 28137755 -112179010 + AT_rich Low_complexity Low_complexity 1 21 0 2442 96 0 0 chr10 28140741 28141053 -112175712 - AluSx SINE Alu 0 312 1 262 307 108 12 chr10 28141352 28141518 -112175247 - MIR SINE MIR 0 262 81 406 322 41 6 chr10 28142017 28142188 -112174577 + MER5B DNA MER1_type 2 178 0 366 80 0 0 chr10 28143074 28143124 -112173641 + (CA)n Simple_repeat Simple_repeat 1 50 0 997 186 35 30 chr10 28143157 28143356 -112173409 - MER3 DNA MER1_type 0 209 10 1738 172 82 18 chr10 28143540 28143883 -112172882 - MLT1A1 LTR MaLR 0 365 1 2131 114 0 39 chr10 28144496 28144802 -112171963 - AluSx SINE Alu -18 294 1 3474 150 105 0 chr10 28145251 28145858 -112170907 - LTR51 LTR ERV1 0 671 1 21 82 0 0 chr10 28149011 28149060 -112167705 + AT_rich Low_complexity Low_complexity 1 49 0 545 103 0 11 chr10 28151012 28151099 -112165666 + (GGGA)n Simple_repeat Simple_repeat 4 89 0 401 218 62 38 chr10 28152348 28152517 -112164248 - L1MD3 LINE L1 0 7995 7772 1167 147 0 0 chr10 28152545 28152715 -112164050 - AluSg/x SINE Alu -9 301 132 2265 105 0 7 chr10 28152715 28153021 -112163744 - AluSx SINE Alu -8 304 1 254 195 0 49 chr10 28153047 28153129 -112163636 - L1MC5 LINE L1 -279 7682 7605 494 308 81 9 chr10 28153715 28153839 -112162926 + MIR SINE MIR 17 131 -131 3803 94 59 0 chr10 28153839 28154362 -112162403 + MER41A LTR ERV1 1 554 0 494 308 81 9 chr10 28154362 28154458 -112162307 + MIR SINE MIR 131 253 -9 188 184 20 0 chr10 28154873 28154922 -112161843 + (TA)n Simple_repeat Simple_repeat 1 50 0 3177 102 13 55 chr10 28155375 28156041 -112160724 + LTR8A LTR ERV1 1 727 0 3074 125 53 25 chr10 28156540 28157137 -112159628 - MER4B LTR ERV1 0 779 1 2027 136 13 7 chr10 28158769 28159070 -112157695 + AluJb SINE Alu 1 303 -9 795 217 0 6 chr10 28159215 28159376 -112157389 + MIR SINE MIR 33 192 -70 1463 178 36 77 chr10 28159907 28160186 -112156579 + MLT1A1 LTR MaLR 16 278 -87 1529 199 28 7 chr10 28160186 28160472 -112156293 + AluJo SINE Alu 1 292 -20 1463 178 36 77 chr10 28160472 28160557 -112156208 + MLT1A1 LTR MaLR 278 365 0 510 17 0 0 chr10 28160624 28160683 -112156082 + (CA)n Simple_repeat Simple_repeat 2 60 0 324 0 0 0 chr10 28161345 28161381 -112155384 + (TG)n Simple_repeat Simple_repeat 1 36 0 1742 141 64 7 chr10 28162510 28162793 -112153972 - AluSx SINE Alu -13 299 1 2174 112 0 3 chr10 28163159 28163471 -112153294 + AluSx SINE Alu 1 311 -1 1606 178 24 21 chr10 28163945 28164232 -112152533 - AluJb SINE Alu -22 290 3 2464 76 3 0 chr10 28165178 28165480 -112151285 - AluSp SINE Alu -10 303 1 260 277 146 36 chr10 28165744 28165881 -112150884 - L2 LINE L2 0 3313 3162 1062 149 0 5 chr10 28165896 28166091 -112150674 + L1MA6 LINE L1 6107 6300 0 553 164 17 0 chr10 28166093 28166209 -112150556 + GA-rich Low_complexity Low_complexity 3 120 0 287 262 33 49 chr10 28166753 28166875 -112149890 - L2 LINE L2 -634 2680 2561 269 216 59 39 chr10 28167978 28168131 -112148634 + HAL1 LINE L1 1066 1221 -1286 830 148 49 0 chr10 28168177 28168319 -112148446 + L1PB3 LINE L1 5998 6146 -8 21 57 0 0 chr10 28168319 28168354 -112148411 + AT_rich Low_complexity Low_complexity 1 35 0 547 182 27 9 chr10 28168363 28168473 -112148292 + FLAM_A SINE Alu 11 122 -20 2388 96 0 3 chr10 28168481 28168784 -112147981 + AluSp SINE Alu 1 302 -11 460 348 78 12 chr10 28168884 28169217 -112147548 + L1MEd LINE L1 11 365 -5754 1534 264 90 26 chr10 28169219 28169805 -112146960 - L2 LINE L2 -2595 719 96 3374 95 2 12 chr10 28170090 28170448 -112146317 - L1PB1 LINE L1 -1 6150 5797 450 0 0 0 chr10 28170448 28170498 -112146267 + (TG)n Simple_repeat Simple_repeat 1 50 0 3374 95 2 12 chr10 28170498 28170632 -112146133 - L1PB1 LINE L1 -354 5797 5663 2134 145 3 0 chr10 28171146 28171457 -112145308 + AluSx SINE Alu 1 312 0 180 0 0 0 chr10 28172381 28172401 -112144364 + (TA)n Simple_repeat Simple_repeat 2 21 0 339 333 9 47 chr10 28172490 28172591 -112144174 - L1ME LINE L1 -389 5732 5642 2021 147 0 16 chr10 28172591 28172766 -112143999 - AluJb SINE Alu -3 309 140 1911 113 28 14 chr10 28172766 28173057 -112143708 - AluSq SINE Alu -18 295 1 2021 147 0 16 chr10 28173057 28173195 -112143570 - AluJb SINE Alu -172 140 1 339 333 9 47 chr10 28173195 28173306 -112143459 - L1ME LINE L1 -479 5642 5528 304 327 86 41 chr10 28173660 28173880 -112142885 + HAL1 LINE L1 975 1204 -1303 335 174 12 0 chr10 28174017 28174103 -112142662 + (TA)n Simple_repeat Simple_repeat 1 87 0 2438 153 8 0 chr10 28174479 28174879 -112141886 - MER57A LTR ERV1 0 403 1 299 312 85 21 chr10 28175357 28175498 -112141267 - MIR3 SINE MIR -31 177 28 400 263 39 90 chr10 28176335 28176590 -112140175 - L1M4 LINE L1 -3095 3233 2992 5889 92 14 52 chr10 28176616 28177770 -112138995 + L1PA10 LINE L1 5049 6166 -2 221 194 0 32 chr10 28177902 28177964 -112138801 + (TATATG)n Simple_repeat Simple_repeat 5 64 0 461 273 16 16 chr10 28178084 28178205 -112138560 + L2 LINE L2 3190 3310 -3 347 247 72 0 chr10 28178438 28178535 -112138230 - MER91C DNA MER1_type -35 105 2 294 29 0 0 chr10 28178696 28178731 -112138034 + (TC)n Simple_repeat Simple_repeat 1 35 0 4237 80 102 2 chr10 28179691 28180291 -112136474 + PABL_A LTR ERV1 1 660 0 4767 104 10 18 chr10 28180292 28181023 -112135742 + PABL_A-int LTR ERV1 2 726 -4289 541 52 0 0 chr10 28181024 28181101 -112135664 - Alu SINE Alu -3 307 231 1381 43 0 16 chr10 28181101 28181287 -112135478 + PABL_A-int LTR ERV1 717 899 -4116 * 3536 63 2 4 chr10 28181279 28181783 -112134982 + PABL_A-int LTR ERV1 1151 1653 -3362 809 156 271 0 chr10 28181783 28181982 -112134783 - LTR8 LTR ERV1 -438 253 1 1257 46 46 5 chr10 28181982 28182177 -112134588 + PABL_A-int LTR ERV1 1862 2064 -2951 4754 228 28 11 chr10 28182179 28183491 -112133274 - L1M4 LINE L1 -4066 1262 14 625 127 59 34 chr10 28184067 28184185 -112132580 + FLAM_C SINE Alu 13 133 -10 1748 111 88 50 chr10 28184191 28184488 -112132277 - AluSx SINE Alu -4 308 1 349 252 137 8 chr10 28184849 28184980 -112131785 + L2 LINE L2 3158 3305 -8 2714 181 22 67 chr10 28185267 28185908 -112130857 - LTR9 LTR ERV1 0 612 1 5730 120 3 1 chr10 28186092 28187036 -112129729 + L1PA13 LINE L1 5215 6163 0 1334 158 10 86 chr10 28187565 28187829 -112128936 + MSTA LTR MaLR 148 388 -40 1937 150 7 0 chr10 28187829 28188122 -112128643 - AluSx SINE Alu -17 295 1 1334 158 10 86 chr10 28188122 28188161 -112128604 + MSTA LTR MaLR 388 428 0 668 267 29 6 chr10 28189064 28189236 -112127529 + FRAM SINE Alu 1 40 0 678 197 15 28 chr10 28189240 28189558 -112127207 + GA-rich Low_complexity Low_complexity 1 313 0 841 161 0 17 chr10 28189598 28189778 -112126987 + GA-rich Low_complexity Low_complexity 4 180 0 315 164 0 0 chr10 28190833 28190894 -112125871 + (CA)n Simple_repeat Simple_repeat 2 62 0 985 116 46 0 chr10 28191781 28191954 -112124811 + L1MA4 LINE L1 6115 6295 -5 23 0 0 0 chr10 28192052 28192075 -112124690 + AT_rich Low_complexity Low_complexity 1 23 0 224 292 0 0 chr10 28192081 28192129 -112124636 - MIR SINE MIR -4 258 211 2249 86 20 3 chr10 28192437 28192460 -112124305 - AluSc SINE Alu -2 307 286 531 0 0 0 chr10 28192460 28192519 -112124246 + (TATG)n Simple_repeat Simple_repeat 2 60 0 2249 86 20 3 chr10 28192519 28192797 -112123968 - AluSc SINE Alu -23 286 1 415 314 39 76 chr10 28192797 28193281 -112123484 - L1M4 LINE L1 -939 5207 4742 451 309 46 0 chr10 28193318 28193470 -112123295 - MIR SINE MIR -102 160 2 877 70 0 31 chr10 28193476 28193605 -112123160 + AluY SINE Alu 187 311 0 21 36 0 0 chr10 28193676 28193704 -112123061 + AT_rich Low_complexity Low_complexity 1 28 0 1850 141 48 0 chr10 28193783 28194073 -112122692 + AluSx SINE Alu 1 304 -8 593 300 50 27 chr10 28194277 28194717 -112122048 - L1M4 LINE L1 -2027 4119 3670 201 278 19 0 chr10 28195952 28196006 -112120759 - L2 LINE L2 -575 2739 2685 3662 107 73 28 chr10 28196007 28197070 -112119695 + MER11A LTR ERVK 1 1232 -4 233 361 98 15 chr10 28197604 28197809 -112118956 + L2 LINE L2 2643 2864 -450 2181 103 4 0 chr10 28198038 28198348 -112118417 - AluY SINE Alu 0 311 1 2234 112 0 0 chr10 28198350 28198644 -112118121 - AluSg SINE Alu -16 294 1 1112 160 9 19 chr10 28198975 28199096 -112117669 + MER2 DNA MER2_type 1 122 -223 189 0 0 0 chr10 28199096 28199117 -112117648 + (TA)n Simple_repeat Simple_repeat 1 21 0 639 152 64 24 chr10 28199117 28199242 -112117523 - FLAM_C SINE Alu -3 130 1 1112 160 9 19 chr10 28199242 28199331 -112117434 + MER2 DNA MER2_type 120 210 -135 2545 113 60 21 chr10 28200005 28200438 -112116327 + LTR7 LTR ERV1 1 450 0 411 21 0 0 chr10 28201121 28201169 -112115596 + (GA)n Simple_repeat Simple_repeat 1 48 0 1271 202 67 5 chr10 28202815 28203241 -112113524 + MLT1D LTR MaLR 1 491 -14 849 204 58 119 chr10 28203251 28203628 -112113137 - MLT1A1 LTR MaLR -11 354 1 522 164 82 9 chr10 28203637 28203747 -112113018 + MLT1D-int LTR MaLR 2 119 -1252 1049 251 130 14 chr10 28204118 28204540 -112112225 + MER20B DNA MER1_type 124 594 -189 394 123 86 12 chr10 28204538 28204619 -112112146 - LTR52 LTR ERVL -29 392 306 * 4821 132 19 12 chr10 28204620 28205426 -112111339 + L1MC2 LINE L1 5532 6342 -2 392 290 65 12 chr10 28205490 28205767 -112110998 + L1ME LINE L1 5283 5495 -669 499 240 8 8 chr10 28205767 28205888 -112110877 - MLT1E LTR MaLR 0 593 473 1485 229 32 5 chr10 28205900 28206446 -112110319 + Charlie1 DNA MER1_type 1817 2454 -307 206 130 19 37 chr10 28208085 28208139 -112108626 + (TTTG)n Simple_repeat Simple_repeat 3 55 0 552 190 0 17 chr10 28209894 28210010 -112106755 - AluSg/x SINE Alu -2 307 194 2857 118 7 16 chr10 28212569 28213018 -112103747 - MER65A LTR ERV1 0 445 1 890 97 0 0 chr10 28215009 28215122 -112101643 - AluSg/x SINE Alu -13 299 187 21 0 0 0 chr10 28215374 28215395 -112101370 + AT_rich Low_complexity Low_complexity 1 21 0 195 300 118 27 chr10 28215745 28215855 -112100910 - L2 LINE L2 -672 2642 2523 2426 96 0 0 chr10 28218381 28218693 -112098072 - AluSx SINE Alu 0 312 1 298 325 91 20 chr10 28218992 28219189 -112097576 - MIR SINE MIR 0 262 52 440 328 41 6 chr10 28219657 28219828 -112096937 + MER5B DNA MER1_type 2 178 0 366 80 0 0 chr10 28220714 28220764 -112096001 + (CA)n Simple_repeat Simple_repeat 1 50 0 1005 186 35 30 chr10 28220797 28220996 -112095769 - MER3 DNA MER1_type 0 209 10 1540 184 87 19 chr10 28221180 28221501 -112095264 - MLT1A1 LTR MaLR 0 365 23 963 280 224 19 chr10 28221508 28222443 -112094322 + L2 LINE L2 1687 2812 -502 1766 96 15 165 chr10 28222523 28222744 -112094021 + MER1B DNA MER1_type 1 139 -2573 1857 109 4 0 chr10 28222744 28223001 -112093764 + AluSx SINE Alu 38 295 -17 1766 96 15 165 chr10 28223001 28223173 -112093592 + MER1B DNA MER1_type 139 335 -4 24 32 0 0 chr10 28223909 28223940 -112092825 + AT_rich Low_complexity Low_complexity 1 31 0 2165 111 3 10 chr10 28224086 28224384 -112092381 + AluSp SINE Alu 1 296 -17 2301 105 0 26 chr10 28224393 28224706 -112092059 + AluSx SINE Alu 1 305 -7 313 260 58 10 chr10 28225279 28225383 -112091382 + L1ME LINE L1 5521 5629 -492 676 278 110 0 chr10 28225529 28225702 -112091063 - MIR SINE MIR -42 220 29 2190 91 6 64 chr10 28225846 28226176 -112090589 + AluY SINE Alu 1 311 0 1296 187 79 18 chr10 28226737 28227015 -112089750 + AluJo SINE Alu 1 295 -17 1908 96 4 0 chr10 28227710 28227961 -112088804 + AluSx SINE Alu 29 280 -32 2241 170 104 18 chr10 28228338 28228791 -112087974 + LTR39 LTR ERV1 1 492 -291 777 172 16 0 chr10 28229543 28229671 -112087094 - FLAM_C SINE Alu -3 130 1 1766 180 0 0 chr10 28230339 28230617 -112086148 + AluSx SINE Alu 3 280 -32 325 151 14 14 chr10 28230619 28230692 -112086073 + GA-rich Low_complexity Low_complexity 3 75 0 6169 33 30 3 chr10 28231170 28231894 -112084871 - L1PA3 LINE L1 0 6155 5412 2684 66 22 19 chr10 28232717 28233079 -112083686 + L1PA11 LINE L1 5686 6048 -126 397 87 0 29 chr10 28233381 28233450 -112083315 + (GGAA)n Simple_repeat Simple_repeat 2 68 0 494 330 110 42 chr10 28233454 28234171 -112082594 - L1 LINE L1 -1098 5048 4283 723 243 119 5 chr10 28234259 28234444 -112082321 + MER58A DNA MER1_type 19 224 0 648 332 55 7 chr10 28234494 28234941 -112081824 - L1 LINE L1 -2013 4133 3666 1666 183 0 30 chr10 28235386 28235687 -112081078 + AluJo SINE Alu 1 292 -20 2019 66 8 0 chr10 28235972 28236216 -112080549 - L1PA8 LINE L1 -15 6157 5912 412 274 65 38 chr10 28236572 28236629 -112080136 - MIR SINE MIR -29 233 179 1726 182 0 26 chr10 28236629 28236937 -112079828 - AluJo SINE Alu -10 302 3 412 274 65 38 chr10 28236937 28237065 -112079700 - MIR SINE MIR -83 179 43 369 217 76 131 chr10 28237606 28237668 -112079097 + LTR41 LTR ERVL 1 65 -708 3727 183 13 37 chr10 28237668 28238433 -112078332 - L1MB8 LINE L1 0 6178 5432 369 217 76 131 chr10 28238433 28238568 -112078197 + LTR41 LTR ERVL 65 187 -586 314 228 84 109 chr10 28238827 28238950 -112077815 + LTR41 LTR ERVL 586 690 -105 1032 147 70 0 chr10 28238950 28239107 -112077658 - FAM SINE Alu -7 168 1 314 228 84 109 chr10 28239107 28239211 -112077554 + LTR41 LTR ERVL 690 795 0 30 0 0 0 chr10 28240274 28240304 -112076461 + AT_rich Low_complexity Low_complexity 1 30 0 270 304 140 14 chr10 28240481 28240695 -112076070 + MIR SINE MIR 20 260 -2 1107 197 38 94 chr10 28240965 28241314 -112075451 + MLT1B LTR MaLR 1 321 -69 5783 145 25 16 chr10 28242058 28243018 -112073747 - LTR5 LTR ERVK 0 969 1 497 267 62 14 chr10 28246452 28246598 -112070167 - L2 LINE L2 -1 3312 3160 270 287 23 0 chr10 28246736 28246823 -112069942 - MER117 DNA MER1_type -64 133 45 1700 218 0 15 chr10 28246885 28247215 -112069550 + MLT1A1 LTR MaLR 1 325 -40 968 133 144 6 chr10 28247215 28247396 -112069369 + MSTA LTR MaLR 1 206 -222 2316 149 56 30 chr10 28247397 28247915 -112068850 - MLT2A2 LTR ERVL 0 554 1 1002 153 139 20 chr10 28247915 28248117 -112068648 + MSTA LTR MaLR 203 428 0 377 67 0 0 chr10 28248117 28248162 -112068603 + MLT1A1 LTR MaLR 330 374 0 2374 95 0 0 chr10 28248666 28248972 -112067793 - AluSg SINE Alu -4 306 1 1999 113 42 0 chr10 28250277 28250561 -112066204 + AluSx SINE Alu 1 296 -16 36 0 0 0 chr10 28250623 28250659 -112066106 + AT_rich Low_complexity Low_complexity 1 36 0 988 114 11 86 chr10 28250829 28251031 -112065734 - AluSg/x SINE Alu 0 310 132 1584 161 0 8 chr10 28251031 28251286 -112065479 - AluSx SINE Alu -22 290 38 1924 146 13 3 chr10 28252581 28252890 -112063875 + AluJb SINE Alu 1 312 0 2554 42 0 10 chr10 28253025 28253332 -112063433 + AluY SINE Alu 1 304 -7 186 43 0 0 chr10 28253709 28253732 -112063033 + (TG)n Simple_repeat Simple_repeat 2 24 0 774 150 45 0 chr10 28254577 28254710 -112062055 - MER2 DNA MER2_type -25 320 182 4523 99 55 68 chr10 28254766 28255203 -112061562 + L1MA4A LINE L1 5362 5785 -518 2196 125 3 0 chr10 28255203 28255508 -112061257 + AluSg SINE Alu 1 306 -4 4523 99 55 68 chr10 28255508 28255858 -112060907 + L1MA4A LINE L1 5785 6138 -165 2097 101 0 0 chr10 28255958 28256225 -112060540 - AluSg SINE Alu -43 267 1 2083 113 0 30 chr10 28256746 28257047 -112059718 + AluSx SINE Alu 1 292 -20 1839 181 7 0 chr10 28257227 28257536 -112059229 - AluJb SINE Alu -1 311 1 458 129 0 0 chr10 28257842 28257912 -112058853 - Alu SINE Alu -1 309 240 * 615 222 0 22 chr10 28257907 28258042 -112058723 + AluY SINE Alu 98 229 -82 1674 91 0 0 chr10 28258536 28258746 -112058019 + AluSg/x SINE Alu 82 291 -21 342 188 139 30 chr10 28258751 28258852 -112057913 + L1MC5 LINE L1 7646 7757 -204 1582 183 0 14 chr10 28259019 28259308 -112057457 - AluJo SINE Alu -14 298 14 25 31 0 0 chr10 28259347 28259379 -112057386 + AT_rich Low_complexity Low_complexity 1 32 0 3640 109 103 26 chr10 28260390 28261436 -112055329 + MER11A LTR ERVK 1 1232 -4 208 231 77 0 chr10 28261986 28262051 -112054714 + L2 LINE L2 3244 3313 0 916 179 109 10 chr10 28262234 28262435 -112054330 + AluJo SINE Alu 85 305 -7 233 88 0 0 chr10 28262783 28262817 -112053948 - L1P LINE L1 -878 5287 5254 * 6629 206 9 10 chr10 28262788 28264183 -112052582 - L1 LINE L1 -864 5282 3889 1756 143 3 40 chr10 28264311 28264611 -112052154 + AluJo SINE Alu 1 289 -23 325 91 0 254 chr10 28264939 28265049 -112051716 - L1MA10 LINE L1 -2 6332 6251 21 0 0 0 chr10 28265571 28265592 -112051173 + GC_rich Low_complexity Low_complexity 1 21 0 1362 180 112 25 chr10 28266230 28266508 -112050257 - AluJo SINE Alu 0 302 1 1284 148 5 0 chr10 28266721 28266917 -112049848 - AluSg/x SINE Alu -16 294 98 282 29 0 0 chr10 28267384 28267419 -112049346 + (CA)n Simple_repeat Simple_repeat 2 36 0 1624 166 34 88 chr10 28267524 28267623 -112049142 + MLT1A1 LTR MaLR 1 104 -261 2306 132 24 32 chr10 28267623 28268001 -112048764 - THE1C LTR MaLR 0 375 1 1624 166 34 88 chr10 28268001 28268180 -112048585 + MLT1A1 LTR MaLR 104 255 -110 2627 190 34 58 chr10 28268180 28268806 -112047959 + LTR9 LTR ERV1 2 612 0 1624 166 34 88 chr10 28268806 28268912 -112047853 + MLT1A1 LTR MaLR 255 365 0 243 0 0 0 chr10 28269061 28269088 -112047677 + (TG)n Simple_repeat Simple_repeat 2 28 0 2043 86 27 38 chr10 28269088 28269380 -112047385 - AluY SINE Alu -22 289 1 382 259 107 56 chr10 28269380 28269596 -112047169 - MIR SINE MIR -13 249 23 5806 65 0 0 chr10 28270082 28270778 -112045987 + L1PA5 LINE L1 5453 6148 -6 2227 123 0 0 chr10 28270940 28271248 -112045517 - AluSx SINE Alu 0 312 5 2287 65 0 0 chr10 28271735 28272010 -112044755 - L1PA5 LINE L1 -1 6153 5879 810 42 0 0 chr10 28272011 28272107 -112044658 + L1PA5 LINE L1 5794 5889 -265 457 277 90 86 chr10 28272395 28272422 -112044343 + L2 LINE L2 1727 1752 -1562 1463 209 11 4 chr10 28272422 28272700 -112044065 - AluJo SINE Alu -32 280 1 457 277 90 86 chr10 28272700 28273195 -112043570 + L2 LINE L2 1752 2251 -1063 656 305 71 20 chr10 28273342 28273637 -112043128 - HERV16 LTR ERVL -4685 311 2 1435 249 26 13 chr10 28273639 28274025 -112042740 - LTR16A LTR ERVL -1 449 59 341 222 170 46 chr10 28274062 28274215 -112042550 + MIR SINE MIR 91 262 0 25 0 0 0 chr10 28274237 28274262 -112042503 + AT_rich Low_complexity Low_complexity 1 25 0 2397 93 0 0 chr10 28274321 28274631 -112042134 - AluY SINE Alu -1 310 1 181 250 76 76 chr10 28274653 28274745 -112042020 + L2 LINE L2 3124 3215 -98 495 289 31 31 chr10 28274854 28275082 -112041683 + L2 LINE L2 567 794 -2520 292 200 24 40 chr10 28276042 28276167 -112040598 + (TA)n Simple_repeat Simple_repeat 1 123 0 3591 75 10 20 chr10 28276350 28276859 -112039906 + L1PA8 LINE L1 5594 6097 -75 332 293 71 87 chr10 28277003 28277339 -112039426 - L1MC/D LINE L1 -2054 5754 5427 5201 81 6 0 chr10 28277339 28277997 -112038768 + L1PA8 LINE L1 5511 6172 0 332 293 71 87 chr10 28277997 28278168 -112038597 - L1MC/D LINE L1 -2381 5427 5255 32 43 0 0 chr10 28278462 28278508 -112038257 + AT_rich Low_complexity Low_complexity 1 46 0 230 81 27 0 chr10 28278518 28278555 -112038210 + (TCTA)n Simple_repeat Simple_repeat 1 38 0 1013 233 173 67 chr10 28278582 28278912 -112037853 - MSTD LTR MaLR 0 396 1 25 0 0 0 chr10 28279542 28279567 -112037198 + AT_rich Low_complexity Low_complexity 1 25 0 469 332 48 34 chr10 28279578 28280054 -112036711 - L1MC/D LINE L1 -2006 4140 3658 972 166 0 0 chr10 28280483 28280634 -112036131 + FAM SINE Alu 20 170 -15 24 0 0 0 chr10 28280689 28280713 -112036052 + AT_rich Low_complexity Low_complexity 1 24 0 318 233 217 0 chr10 28281530 28281659 -112035106 + L1MCc LINE L1 1378 1534 -4889 243 294 99 41 chr10 28281896 28282117 -112034648 + L1MCc LINE L1 1773 2006 -4925 1856 159 0 0 chr10 28282117 28282394 -112034371 + AluSx SINE Alu 1 277 -35 369 0 0 0 chr10 28282398 28282439 -112034326 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 226 214 0 36 chr10 28282451 28282507 -112034258 + L1MCc LINE L1 2026 2079 -5043 571 217 37 56 chr10 28282672 28282833 -112033932 - MER5B DNA MER1_type -4 174 17 1904 152 0 34 chr10 28283132 28283455 -112033310 + AluSx SINE Alu 1 312 0 364 200 211 0 chr10 28283911 28284006 -112032759 + L1MA8 LINE L1 5989 6103 -188 1085 141 6 0 chr10 28284006 28284169 -112032596 + FRAM SINE Alu 1 158 -18 996 148 38 11 chr10 28284172 28284355 -112032410 + L1MA8 LINE L1 6099 6286 -5 180 0 0 0 chr10 28284356 28284376 -112032389 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1746 125 3 81 chr10 28284380 28284677 -112032088 - AluSx SINE Alu -38 274 1 1666 185 0 30 chr10 28285185 28285487 -112031278 + AluJb SINE Alu 1 293 -19 1010 283 83 26 chr10 28286208 28286558 -112030207 - MLT1J LTR MaLR -30 481 112 286 214 0 29 chr10 28287610 28287680 -112029085 + GA-rich Low_complexity Low_complexity 1 68 0 2088 135 3 0 chr10 28287763 28288060 -112028705 + AluSx SINE Alu 1 298 -14 840 185 0 0 chr10 28288071 28288206 -112028559 + FLAM_C SINE Alu 2 136 -7 1662 201 7 3 chr10 28288216 28288519 -112028246 + AluJo SINE Alu 3 306 -6 756 190 14 7 chr10 28289210 28289352 -112027413 + FRAM SINE Alu 2 144 -32 276 309 94 42 chr10 28289371 28289562 -112027203 - L2 LINE L2 -411 2903 2703 405 369 45 11 chr10 28289577 28289756 -112027009 + MIR SINE MIR 11 195 -67 780 165 8 0 chr10 28289759 28289880 -112026885 + FLAM_C SINE Alu 2 123 -20 631 333 183 0 chr10 28289902 28290262 -112026503 - L2 LINE L2 -605 2709 2284 883 256 70 32 chr10 28290444 28290760 -112026005 + LTR37A LTR ERV1 99 426 0 962 208 15 34 chr10 28291166 28291431 -112025334 + L1M4 LINE L1 4904 5163 -983 2063 137 0 0 chr10 28291703 28292026 -112024739 - AluSx SINE Alu 0 323 1 7966 31 2 0 chr10 28292128 28293401 -112023364 - L1PA4 LINE L1 -6 6149 4875 539 175 0 53 chr10 28293575 28293689 -112023076 + FLAM_A SINE Alu 35 142 0 1682 171 4 7 chr10 28294305 28294585 -112022180 + AluJo SINE Alu 9 287 -25 1555 160 23 4 chr10 28294657 28294913 -112021852 - L1PA16 LINE L1 0 6166 5906 2355 229 38 72 chr10 28295053 28295754 -112021011 - L1ME1 LINE L1 -4 6162 5488 735 157 0 82 chr10 28295754 28295888 -112020877 - FLAM_A SINE Alu -10 123 1 2355 229 38 72 chr10 28295888 28295954 -112020811 - L1ME1 LINE L1 -678 5488 5421 1336 180 85 39 chr10 28295995 28296278 -112020487 + AluJo SINE Alu 1 296 -16 323 302 0 12 chr10 28296285 28296371 -112020394 - MER5B DNA MER1_type -91 87 3 2760 137 66 15 chr10 28296627 28296961 -112019804 + L1MC3 LINE L1 5262 5628 -2157 4089 94 73 25 chr10 28296961 28297565 -112019200 + LTR10E LTR ERV1 1 633 0 2760 137 66 15 chr10 28297565 28297698 -112019067 + L1MC3 LINE L1 5628 5753 -2032 381 73 59 29 chr10 28297698 28297729 -112019036 + MER41D LTR ERV1 1 30 -527 2164 105 34 7 chr10 28297729 28298023 -112018742 - AluSg SINE Alu -8 302 1 381 73 59 29 chr10 28298023 28298059 -112018706 + MER41D LTR ERV1 30 70 -487 2986 171 44 4 chr10 28298059 28298563 -112018202 + MER41D LTR ERV1 29 552 -5 1249 174 0 0 chr10 28298569 28298782 -112017983 + L1MC3 LINE L1 5755 5967 -1818 1921 141 7 0 chr10 28298857 28299141 -112017624 + AluSx SINE Alu 24 309 -3 451 316 46 0 chr10 28299803 28299955 -112016810 + LTR16A LTR ERVL 258 416 -34 252 212 45 0 chr10 28300198 28300264 -112016501 + MLT1K LTR MaLR 509 577 -11 1117 101 0 126 chr10 28300357 28300423 -112016342 + Tigger2a DNA MER2_type 1 74 -2634 2446 80 3 3 chr10 28300423 28300734 -112016031 - AluY SINE Alu 0 311 1 1117 101 0 126 chr10 28300734 28300874 -112015891 + Tigger2a DNA MER2_type 74 181 -253 1668 129 16 4 chr10 28301032 28301287 -112015478 + Tigger2a DNA MER2_type 187 444 0 21 57 0 0 chr10 28301759 28301794 -112014971 + AT_rich Low_complexity Low_complexity 1 35 0 934 162 0 0 chr10 28301964 28302100 -112014665 + MER1A DNA MER1_type 1 136 -391 2654 101 6 8 chr10 28302100 28302465 -112014300 - THE1B LTR MaLR 0 364 1 * 3049 92 8 0 chr10 28302465 28302841 -112013924 + MER1A DNA MER1_type 132 510 -19 351 243 157 0 chr10 28302867 28303007 -112013758 - MLT1F1 LTR MaLR -40 527 366 274 257 103 18 chr10 28303140 28303268 -112013497 - MLT1F1 LTR MaLR -371 178 1 2195 108 0 0 chr10 28303671 28303957 -112012808 - AluSx SINE Alu -18 294 9 407 330 179 18 chr10 28304019 28304298 -112012467 + L2 LINE L2 176 499 -2815 204 193 0 84 chr10 28304498 28304581 -112012184 + T-rich Low_complexity Low_complexity 5 80 0 1713 145 58 0 chr10 28304591 28304867 -112011898 - AluJo SINE Alu -20 292 1 286 120 0 40 chr10 28304908 28304958 -112011807 - MER94 DNA DNA -86 48 1 206 319 25 0 chr10 28305026 28305145 -112011620 + L2 LINE L2 774 895 -2419 666 333 58 21 chr10 28305196 28305662 -112011103 + L2 LINE L2 1177 1659 -1655 871 171 12 18 chr10 28305680 28305890 -112010875 + AluJo SINE Alu 120 328 0 1305 316 91 23 chr10 28305890 28305950 -112010815 + L2 LINE L2 1712 1767 -1547 2380 136 31 0 chr10 28305950 28306303 -112010462 + THE1B LTR MaLR 1 364 0 1305 316 91 23 chr10 28306303 28307071 -112009694 + L2 LINE L2 1767 2596 -718 2371 128 35 56 chr10 28307072 28307266 -112009499 + Tigger2a DNA MER2_type 1 198 -2510 1658 169 20 23 chr10 28307266 28307568 -112009197 + AluJo SINE Alu 1 301 -11 2371 128 35 56 chr10 28307568 28307804 -112008961 + Tigger2a DNA MER2_type 198 422 -12 4573 123 22 3 chr10 28307804 28308493 -112008272 + MER50 LTR ERV1 1 702 -32 370 367 107 11 chr10 28308586 28308856 -112007909 + L2 LINE L2 2635 2930 -384 195 255 0 0 chr10 28308858 28308905 -112007860 + L2 LINE L2 2482 2528 -786 1660 169 11 22 chr10 28308937 28309209 -112007556 - AluJo SINE Alu -38 274 6 1009 301 62 24 chr10 28309214 28309681 -112007084 + L2 LINE L2 2516 3001 -312 704 287 58 12 chr10 28309776 28310079 -112006686 + L2 LINE L2 2728 3043 -270 344 60 20 0 chr10 28310083 28310133 -112006632 - MER50 LTR ERV1 -544 190 140 196 30 61 0 chr10 28310151 28310184 -112006581 + (TAAA)n Simple_repeat Simple_repeat 4 38 0 763 81 65 0 chr10 28310185 28310309 -112006456 + Tigger2a DNA MER2_type 195 326 -118 729 104 0 9 chr10 28310311 28310417 -112006348 - MER50 LTR ERV1 -629 105 1 1441 134 28 28 chr10 28310417 28310671 -112006094 - Tigger2 DNA MER2_type -12 2706 2453 323 253 66 36 chr10 28310683 28310849 -112005916 + L2 LINE L2 3057 3227 -86 624 266 60 52 chr10 28311145 28311397 -112005368 - L1MC/D LINE L1 -2077 5731 5478 270 0 0 0 chr10 28311801 28311831 -112004934 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 273 299 24 39 chr10 28313659 28313786 -112002979 + MIR3 SINE MIR 43 167 -41 23 0 0 0 chr10 28314422 28314445 -112002320 + AT_rich Low_complexity Low_complexity 1 23 0 199 271 157 0 chr10 28315454 28315524 -112001241 - MIR SINE MIR -142 120 40 229 230 115 106 chr10 28316219 28316332 -112000433 - L1ME3 LINE L1 -81 6081 5968 1399 110 0 11 chr10 28316639 28316830 -111999935 + AluSx SINE Alu 1 189 -123 1441 165 31 39 chr10 28317304 28317564 -111999201 - AluJb SINE Alu -54 258 1 1549 230 228 29 chr10 28317611 28318372 -111998393 - L2 LINE L2 -40 3273 2346 337 243 39 29 chr10 28318437 28318540 -111998225 - MIR SINE MIR -89 173 70 2182 96 0 4 chr10 28318550 28318822 -111997943 + AluSc SINE Alu 7 277 -32 746 50 0 10 chr10 28318823 28318923 -111997842 + (GAAA)n Simple_repeat Simple_repeat 2 100 0 814 126 7 63 chr10 28319138 28319281 -111997484 - FLAM_C SINE Alu -7 136 2 780 160 112 0 chr10 28320455 28320580 -111996185 + FRAM SINE Alu 1 139 -37 293 42 0 42 chr10 28320582 28320630 -111996135 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 316 305 0 24 chr10 28320632 28320714 -111996051 - L2 LINE L2 -93 3179 3100 2187 82 10 16 chr10 28320822 28321127 -111995638 + AluY SINE Alu 5 307 -4 407 218 0 0 chr10 28321361 28321448 -111995317 - MER33 DNA MER1_type 0 324 238 456 169 14 0 chr10 28321452 28321523 -111995242 - AluJ/FRAM SINE Alu -17 295 224 850 143 24 0 chr10 28321532 28321658 -111995107 - FLAM_C SINE Alu -10 133 5 38 51 0 0 chr10 28321845 28321904 -111994861 + AT_rich Low_complexity Low_complexity 1 59 0 801 145 0 8 chr10 28321934 28322051 -111994714 - AluJb SINE Alu -178 134 19 906 138 31 0 chr10 28322060 28322219 -111994546 - MER33 DNA MER1_type -160 164 1 207 146 0 0 chr10 28323011 28323052 -111993713 + (TG)n Simple_repeat Simple_repeat 1 41 0 286 273 162 0 chr10 28323152 28323251 -111993514 - MIR SINE MIR 0 262 148 1729 171 14 0 chr10 28323456 28323742 -111993023 + AluJo SINE Alu 3 292 -20 361 182 15 0 chr10 28323939 28324005 -111992760 + MIR SINE MIR 183 249 -13 2160 117 0 19 chr10 28324414 28324722 -111992043 - AluSx SINE Alu -10 302 1 30 27 0 0 chr10 28324862 28324899 -111991866 + AT_rich Low_complexity Low_complexity 1 37 0 812 152 0 8 chr10 28324990 28325115 -111991650 - FLAM_C SINE Alu -19 124 1 251 342 8 17 chr10 28325396 28325513 -111991252 + MIR3 SINE MIR 89 204 -4 338 189 78 22 chr10 28325953 28326043 -111990722 - MIR SINE MIR -96 166 72 350 264 168 0 chr10 28326255 28326380 -111990385 + MIR SINE MIR 101 246 -16 1483 153 71 0 chr10 28326400 28326655 -111990110 - L1PB4 LINE L1 0 6156 5884 839 298 52 87 chr10 28327398 28327515 -111989250 + L1MB8 LINE L1 5328 5420 -758 4849 93 61 12 chr10 28327515 28327885 -111988880 + L1MA2 LINE L1 5552 5902 -402 1798 112 0 135 chr10 28327885 28328241 -111988524 + AluSg1 SINE Alu 1 308 -1 4849 93 61 12 chr10 28328241 28328575 -111988190 + L1MA2 LINE L1 5902 6304 0 839 298 52 87 chr10 28328575 28328675 -111988090 + L1MB8 LINE L1 5420 5522 -656 2065 81 50 11 chr10 28328973 28329256 -111987509 + AluSg SINE Alu 1 294 -16 1570 169 49 20 chr10 28329449 28329956 -111986809 + L1MB8 LINE L1 5565 6139 -39 209 354 33 74 chr10 28330055 28330298 -111986467 - L2 LINE L2 -400 2914 2682 1018 154 0 0 chr10 28330329 28330485 -111986280 + AluJb SINE Alu 147 302 -10 323 341 116 0 chr10 28331293 28331466 -111985299 + MIR SINE MIR 68 260 -2 1348 245 142 18 chr10 28331474 28331981 -111984784 - MLT1G LTR MaLR 0 590 21 821 178 0 0 chr10 28332098 28332233 -111984532 + AluJo SINE Alu 1 135 -177 1681 205 0 0 chr10 28332233 28332526 -111984239 + AluJo SINE Alu 1 293 -19 971 94 0 16 chr10 28332658 28332785 -111983980 - AluSq/x SINE Alu -187 125 1 539 181 21 0 chr10 28332966 28333060 -111983705 - MER5A DNA MER1_type 0 189 94 1137 200 0 19 chr10 28333065 28333275 -111983490 + AluJo SINE Alu 77 282 -30 368 167 119 36 chr10 28333288 28333372 -111983393 - MER5A DNA MER1_type -98 91 1 403 299 157 10 chr10 28333534 28333738 -111983027 - MIR SINE MIR -7 255 22 620 88 0 0 chr10 28334184 28334264 -111982501 - MADE1 DNA Mariner 0 80 1 578 113 127 0 chr10 28334681 28334823 -111981942 - Tigger3(Golem) DNA MER2_type -504 2525 2366 2061 120 36 3 chr10 28334828 28335129 -111981636 - AluSx SINE Alu -1 311 1 1846 137 7 42 chr10 28335173 28335480 -111981285 - L1PA16 LINE L1 -1 6165 5870 2088 156 11 22 chr10 28335654 28335834 -111980931 + MER47A DNA MER2_type 4 180 -2143 2174 118 0 7 chr10 28335834 28336138 -111980627 + AluSx SINE Alu 1 302 -10 2088 156 11 22 chr10 28336138 28336322 -111980443 + MER47A DNA MER2_type 180 364 -2 774 261 14 24 chr10 28336547 28336765 -111980000 - MIR SINE MIR -9 253 37 2175 101 3 3 chr10 28337264 28337562 -111979203 - AluSc SINE Alu -11 298 1 303 28 0 0 chr10 28338149 28338185 -111978580 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 2121 124 7 7 chr10 28338236 28338543 -111978222 + AluSx SINE Alu 1 307 -5 605 311 95 10 chr10 28338699 28339005 -111977760 - HsTC2 DNA Tc2 -1068 830 499 348 279 47 100 chr10 28339027 28339311 -111977454 - HsTC2 DNA Tc2 -1609 289 28 2177 125 7 0 chr10 28339311 28339614 -111977151 + AluSx SINE Alu 1 305 -7 348 279 47 100 chr10 28339614 28339640 -111977125 - HsTC2 DNA Tc2 -1870 28 2 613 213 45 0 chr10 28340073 28340228 -111976537 + L1MA8 LINE L1 6130 6291 0 2181 126 7 0 chr10 28340701 28341011 -111975754 - AluSx SINE Alu 0 312 1 374 297 64 8 chr10 28341145 28341328 -111975437 + MIR SINE MIR 15 201 -61 1968 134 26 23 chr10 28341542 28341653 -111975112 + AluJo SINE Alu 7 116 -196 1578 110 9 0 chr10 28341653 28341872 -111974893 - AluSg/x SINE Alu -16 294 74 1968 134 26 23 chr10 28341872 28342065 -111974700 + AluJo SINE Alu 116 312 0 325 259 35 17 chr10 28342089 28342205 -111974560 - L1MC4 LINE L1 -6 8036 7919 2370 110 0 0 chr10 28342384 28342694 -111974071 - AluSx SINE Alu -2 310 1 679 226 126 50 chr10 28342707 28342946 -111973819 - L1MC4 LINE L1 -491 7551 7295 189 368 15 0 chr10 28343244 28343312 -111973453 - L2 LINE L2 -44 3228 3160 1126 176 45 10 chr10 28343336 28343535 -111973230 - AluJo SINE Alu -23 289 84 531 299 227 20 chr10 28343549 28343950 -111972815 - L2 LINE L2 0 3313 2830 546 147 0 0 chr10 28343998 28344073 -111972692 + AluS SINE Alu 2 76 -237 1170 107 6 0 chr10 28344073 28344232 -111972533 + AluSc SINE Alu 145 304 -5 447 180 279 6 chr10 28344240 28344401 -111972364 - L2 LINE L2 -1059 2255 2051 532 167 0 211 chr10 28344403 28344630 -111972135 - MER69 DNA AcHobo -1 2525 2347 35 24 0 0 chr10 28344649 28344691 -111972074 + AT_rich Low_complexity Low_complexity 1 42 0 585 213 82 16 chr10 28344974 28345157 -111971608 - MER69 DNA AcHobo -246 2280 2086 260 234 26 39 chr10 28345636 28345713 -111971052 - MER69 DNA AcHobo -101 76 1 624 223 95 0 chr10 28345715 28345863 -111970902 - L2 LINE L2 -1262 2052 1891 914 118 0 15 chr10 28345908 28346043 -111970722 - FLAM_C SINE Alu 0 143 11 306 331 63 21 chr10 28346052 28346194 -111970571 - L2 LINE L2 -1408 1906 1759 1702 161 25 38 chr10 28346757 28347073 -111969692 - AluJo SINE Alu 0 312 1 387 0 0 0 chr10 28347114 28347157 -111969608 + (TG)n Simple_repeat Simple_repeat 2 44 0 23 0 0 0 chr10 28347964 28347987 -111968778 + AT_rich Low_complexity Low_complexity 1 23 0 2004 107 3 17 chr10 28348113 28348402 -111968363 + AluSq SINE Alu 22 306 -7 498 261 53 37 chr10 28348584 28348772 -111967993 + MIR SINE MIR 72 262 0 1206 181 0 0 chr10 28348994 28349198 -111967567 - AluJo SINE Alu -8 304 101 2091 96 11 7 chr10 28349581 28349885 -111966880 - AluSx SINE Alu 0 305 1 229 247 169 11 chr10 28350649 28350738 -111966027 + MIR SINE MIR 20 122 -86 387 262 135 14 chr10 28350875 28351016 -111965749 - MIR SINE MIR -48 214 57 938 118 0 22 chr10 28351227 28351362 -111965403 + FLAM_C SINE Alu 1 132 -1 31 0 0 0 chr10 28351367 28351398 -111965367 + AT_rich Low_complexity Low_complexity 1 31 0 180 0 0 0 chr10 28352491 28352511 -111964254 + (TC)n Simple_repeat Simple_repeat 2 21 0 1848 141 17 0 chr10 28353521 28353812 -111962953 - AluJo SINE Alu -16 296 1 2079 130 0 0 chr10 28355022 28355331 -111961434 + AluSx SINE Alu 1 309 0 394 206 152 78 chr10 28355581 28355622 -111961143 + L1MC5 LINE L1 7671 7708 -253 2182 123 0 0 chr10 28355622 28355923 -111960842 + AluSq SINE Alu 1 301 -12 394 206 152 78 chr10 28355923 28356124 -111960641 + L1MC5 LINE L1 7708 7931 -30 2204 125 3 0 chr10 28356276 28356587 -111960178 + AluSx SINE Alu 1 312 0 225 256 209 39 chr10 28356590 28356719 -111960046 - MIR3 SINE MIR -23 185 35 2302 93 0 0 chr10 28357039 28357329 -111959436 - AluSx SINE Alu -10 302 13 5887 148 35 43 chr10 28357776 28358856 -111957909 - MER11C LTR ERVK 0 1071 1 1398 149 0 5 chr10 28359125 28359333 -111957432 - AluJb SINE Alu -21 291 85 2188 128 3 0 chr10 28359825 28360129 -111956636 + AluSg SINE Alu 1 305 -5 2265 108 0 0 chr10 28360276 28360573 -111956192 - AluSc SINE Alu 0 309 13 884 115 0 65 chr10 28360767 28360906 -111955859 + FLAM_C SINE Alu 2 131 -2 460 69 69 0 chr10 28361167 28361283 -111955482 + (TA)n Simple_repeat Simple_repeat 1 124 0 46 33 0 0 chr10 28362061 28362121 -111954644 + AT_rich Low_complexity Low_complexity 1 60 0 1759 156 60 23 chr10 28362185 28362486 -111954279 + AluJo SINE Alu 1 312 0 1707 104 0 0 chr10 28362549 28362771 -111953994 + AluY SINE Alu 1 222 -89 1296 149 0 5 chr10 28362789 28362990 -111953775 - AluSq SINE Alu -113 200 1 1954 113 0 0 chr10 28363282 28363539 -111953226 - AluSx SINE Alu -55 257 1 1997 139 7 0 chr10 28363739 28364034 -111952731 + AluSx SINE Alu 1 297 -15 1713 134 4 12 chr10 28364510 28364764 -111952001 + AluJo SINE Alu 17 268 -44 606 143 0 0 chr10 28364764 28364848 -111951917 + AluSg/x SINE Alu 217 300 -10 2088 164 0 0 chr10 28365441 28365753 -111951012 + AluJb SINE Alu 1 312 0 2300 94 0 3 chr10 28367872 28368170 -111948595 + AluY SINE Alu 1 297 -14 392 151 55 0 chr10 28368490 28368563 -111948202 + L1MA3 LINE L1 6173 6249 -56 2384 94 0 0 chr10 28368866 28369175 -111947590 + AluY SINE Alu 1 309 -2 2263 114 0 7 chr10 28369940 28370246 -111946519 + AluSx SINE Alu 1 304 -8 1597 159 58 7 chr10 28370291 28370568 -111946197 - AluJo SINE Alu -21 291 1 197 211 410 0 chr10 28370885 28370980 -111945785 + L2 LINE L2 1023 1156 -2158 905 126 0 8 chr10 28371030 28371157 -111945608 - FLAM_C SINE Alu -7 126 1 659 305 11 21 chr10 28371157 28371344 -111945421 + L2 LINE L2 1374 1558 -1756 735 267 61 16 chr10 28371359 28371753 -111945012 + L2 LINE L2 2720 3143 -170 1679 157 4 4 chr10 28371782 28372043 -111944722 - AluJo SINE Alu -34 278 18 328 143 0 0 chr10 28372091 28372140 -111944625 + AluJ/FLAM SINE Alu 18 66 -236 228 230 14 54 chr10 28372213 28372287 -111944478 + L2 LINE L2 3214 3284 -29 440 243 209 51 chr10 28372492 28372723 -111944042 - L2 LINE L2 -337 2977 2689 1712 154 13 27 chr10 28372723 28373022 -111943743 + AluJo SINE Alu 1 295 -17 440 243 209 51 chr10 28373022 28373082 -111943683 - L2 LINE L2 -625 2689 2640 25 51 0 0 chr10 28373994 28374033 -111942732 + AT_rich Low_complexity Low_complexity 1 39 0 520 204 54 0 chr10 28375106 28375199 -111941566 + 5S rRNA rRNA 6 103 -18 2219 123 0 0 chr10 28375470 28375780 -111940985 - AluSg SINE Alu 0 310 1 1700 176 0 11 chr10 28375963 28376247 -111940518 + AluJo SINE Alu 1 281 -31 378 0 0 0 chr10 28376247 28376289 -111940476 + (CA)n Simple_repeat Simple_repeat 1 42 0 1943 145 0 10 chr10 28376571 28376860 -111939905 + AluSx SINE Alu 1 286 -26 211 172 0 250 chr10 28376989 28377117 -111939648 + L2 LINE L2 3137 3232 -40 829 136 0 0 chr10 28377523 28377641 -111939124 - FLAM_C SINE Alu -15 118 1 921 157 0 0 chr10 28378134 28378274 -111938491 - AluJb SINE Alu -28 284 145 751 177 197 14 chr10 28378648 28378795 -111937970 + FAM SINE Alu 2 175 0 2021 92 33 11 chr10 28379273 28379546 -111937219 - AluSc SINE Alu -30 279 1 2134 109 3 38 chr10 28380373 28380693 -111936072 - AluSc SINE Alu 0 309 1 312 218 38 45 chr10 28380713 28380846 -111935919 - MLT1J2 LTR MaLR 0 466 351 596 250 14 14 chr10 28380935 28381079 -111935686 - MLT1J LTR MaLR -312 199 56 628 268 59 117 chr10 28381371 28381610 -111935155 - MER34 LTR ERV1 -18 524 273 2956 104 21 52 chr10 28381610 28381786 -111934979 - MER4C LTR ERV1 0 465 285 1931 124 40 7 chr10 28381786 28382085 -111934680 + AluSx SINE Alu 2 310 -2 2956 104 21 52 chr10 28382085 28382387 -111934378 - MER4C LTR ERV1 -180 285 2 628 268 59 117 chr10 28382387 28382703 -111934062 - MER34 LTR ERV1 -269 273 1 620 198 62 62 chr10 28382740 28382967 -111933798 - L1ME3A LINE L1 -39 6131 5905 1056 173 14 36 chr10 28382968 28383188 -111933577 - AluJb SINE Alu -18 294 80 1882 234 22 44 chr10 28383212 28383469 -111933296 - L1ME3A LINE L1 -316 5854 5593 2057 143 7 0 chr10 28383469 28383776 -111932989 - AluSx SINE Alu -3 309 1 1522 109 24 0 chr10 28383778 28383988 -111932777 - AluSg/x SINE Alu -14 298 84 1882 234 22 44 chr10 28383988 28384269 -111932496 - L1ME3A LINE L1 -578 5592 5325 2214 128 103 35 chr10 28384481 28384553 -111932212 - MSTA LTR MaLR 0 428 362 1921 96 0 57 chr10 28384553 28384833 -111931932 + AluSq SINE Alu 38 301 -12 2214 128 103 35 chr10 28384833 28385157 -111931608 - MSTA LTR MaLR -66 362 5 434 153 0 214 chr10 28385525 28385656 -111931109 + AluJb SINE Alu 1 103 -209 984 251 0 18 chr10 28385656 28385883 -111930882 + MSTD LTR MaLR 174 396 0 2438 180 136 103 chr10 28387155 28387286 -111929479 - Charlie2 DNA MER1_type -1 2861 2736 2256 115 0 0 chr10 28387286 28387574 -111929191 - AluSx SINE Alu -24 288 1 2438 180 136 103 chr10 28387574 28387727 -111929038 - Charlie2 DNA MER1_type -126 2736 2589 1276 179 27 0 chr10 28387727 28387950 -111928815 - L1MC1 LINE L1 0 6333 6105 2438 180 136 103 chr10 28387950 28388258 -111928507 - Charlie2 DNA MER1_type -273 2589 2293 2097 87 55 45 chr10 28388258 28388568 -111928197 + AluSq SINE Alu 1 313 0 2438 180 136 103 chr10 28388568 28388916 -111927849 - Charlie2 DNA MER1_type -569 2293 1888 483 273 212 0 chr10 28388929 28389127 -111927638 - Charlie2 DNA MER1_type -2532 330 91 767 176 15 15 chr10 28389210 28389341 -111927424 + FLAM_C SINE Alu 1 131 -2 640 224 203 10 chr10 28389525 28389880 -111926885 + MER39 LTR ERV1 9 469 -238 1755 187 17 28 chr10 28389924 28390277 -111926488 - MER4D LTR ERV1 -8 895 547 683 182 6 12 chr10 28390276 28390424 -111926341 - MER4E LTR ERV1 -589 283 28 * 291 157 0 0 chr10 28390441 28390492 -111926273 + CT-rich Low_complexity Low_complexity 2 52 0 1862 155 28 0 chr10 28390524 28390815 -111925950 + AluJb SINE Alu 1 299 -13 896 179 27 11 chr10 28390835 28391019 -111925746 + MER39 LTR ERV1 521 707 0 1177 228 131 60 chr10 28391146 28391641 -111925124 - MER39 LTR ERV1 0 707 1 350 232 36 72 chr10 28391928 28391956 -111924809 - L1ME4a LINE L1 0 6121 6094 2207 92 0 3 chr10 28391956 28392260 -111924505 + AluSc SINE Alu 1 303 0 350 232 36 72 chr10 28392260 28392368 -111924397 - L1ME4a LINE L1 -27 6094 5989 1950 139 23 7 chr10 28392783 28393084 -111923681 + AluJo SINE Alu 1 306 -6 2354 98 3 0 chr10 28393203 28393509 -111923256 - AluSq SINE Alu -6 307 1 443 258 15 22 chr10 28393594 28393782 -111922983 - MLT1H LTR MaLR -221 192 36 240 357 110 34 chr10 28393818 28394081 -111922684 + L2 LINE L2 2870 3152 -120 1805 165 0 0 chr10 28394172 28394445 -111922320 + AluJo SINE Alu 1 273 -39 2148 138 0 6 chr10 28395145 28395456 -111921309 - AluSx SINE Alu -1 311 3 619 152 0 0 chr10 28395605 28395704 -111921061 - L1MB4 LINE L1 0 6180 6082 844 173 0 8 chr10 28395746 28395879 -111920886 - FLAM_A SINE Alu -1 132 1 2468 71 0 0 chr10 28395927 28396221 -111920544 + AluSg SINE Alu 1 294 -16 533 248 118 7 chr10 28396238 28396391 -111920374 + MIR SINE MIR 64 233 -29 1886 128 57 4 chr10 28396589 28396870 -111919895 + AluSg SINE Alu 1 296 -14 2504 54 0 0 chr10 28396904 28397198 -111919567 + AluY SINE Alu 1 294 -17 966 157 13 7 chr10 28397320 28397473 -111919292 + FRAM SINE Alu 2 155 -21 479 252 224 0 chr10 28397490 28397637 -111919128 - MER5A DNA MER1_type -8 181 2 1930 147 0 26 chr10 28397990 28398297 -111918468 - AluJo SINE Alu -2 310 12 251 248 74 33 chr10 28398473 28398594 -111918171 + Charlie8 DNA MER1_type 116 241 -2176 861 165 0 0 chr10 28399698 28399831 -111916934 + FLAM_A SINE Alu 1 133 0 300 192 10 101 chr10 28399981 28400080 -111916685 + Charlie8 DNA MER1_type 123 212 -2205 28 71 0 0 chr10 28400611 28400667 -111916098 + AT_rich Low_complexity Low_complexity 1 56 0 24 32 0 0 chr10 28400795 28400826 -111915939 + AT_rich Low_complexity Low_complexity 1 31 0 1897 101 14 0 chr10 28400835 28401111 -111915654 - L1MA1 LINE L1 0 6302 6023 313 276 191 13 chr10 28401273 28401425 -111915340 - MIR SINE MIR -81 181 3 1792 144 6 58 chr10 28402103 28402429 -111914336 - AluJb SINE Alu -3 309 1 387 295 105 57 chr10 28403097 28403169 -111913596 + L1ME4a LINE L1 3997 4064 -2082 2025 148 0 3 chr10 28403169 28403472 -111913293 + AluSx SINE Alu 1 302 -10 387 295 105 57 chr10 28403472 28403879 -111912886 + L1ME4a LINE L1 4064 4515 -1631 2480 67 0 3 chr10 28403879 28404176 -111912589 + AluSg SINE Alu 1 296 -14 387 295 105 57 chr10 28404176 28404286 -111912479 + L1ME4a LINE L1 4515 4618 -1528 365 248 81 6 chr10 28404484 28404645 -111912120 + L1ME4a LINE L1 4882 5054 -1092 1701 174 16 7 chr10 28404647 28404951 -111911814 + AluJo SINE Alu 1 307 -5 431 111 0 14 chr10 28404961 28405033 -111911732 + (GGAA)n Simple_repeat Simple_repeat 2 72 0 365 278 125 44 chr10 28405034 28405812 -111910953 + L1ME4a LINE L1 5040 5885 -236 636 155 0 0 chr10 28405812 28405909 -111910856 + AluJ/FLAM SINE Alu 2 98 -214 33 0 0 0 chr10 28406010 28406043 -111910722 + AT_rich Low_complexity Low_complexity 1 33 0 1193 89 0 0 chr10 28406696 28406854 -111909911 - L1MA5A LINE L1 0 6297 6140 1789 174 3 0 chr10 28407686 28407974 -111908791 - AluJb SINE Alu -23 289 1 21 57 0 0 chr10 28408312 28408347 -111908418 + AT_rich Low_complexity Low_complexity 1 35 0 963 177 62 29 chr10 28408381 28408590 -111908175 + MER20 DNA MER1_type 1 216 -3 2161 119 3 3 chr10 28408703 28409015 -111907750 + AluSx SINE Alu 1 312 0 209 227 0 106 chr10 28409040 28409106 -111907659 + L2 LINE L2 3208 3266 -47 * 688 272 141 12 chr10 28409103 28409423 -111907342 - L2 LINE L2 -58 3255 2895 266 234 16 0 chr10 28409559 28409623 -111907142 - MIR SINE MIR -179 83 19 295 306 111 0 chr10 28409830 28409938 -111906827 + MER5A DNA MER1_type 7 126 -63 2183 96 0 51 chr10 28410861 28410997 -111905768 + AluSx SINE Alu 1 142 -170 2797 19 0 0 chr10 28410997 28411308 -111905457 + AluY SINE Alu 1 311 0 2183 96 0 51 chr10 28411308 28411485 -111905280 + AluSx SINE Alu 142 298 -14 296 325 152 10 chr10 28411574 28411771 -111904994 + MIR SINE MIR 38 262 0 674 178 76 0 chr10 28411804 28411922 -111904843 - MER5A DNA MER1_type 0 189 63 6380 209 84 76 chr10 28411946 28412924 -111903841 - L1MA6 LINE L1 -1 6503 5534 2237 99 0 16 chr10 28412924 28413263 -111903502 - AluSq SINE Alu 0 313 1 6380 209 84 76 chr10 28413263 28413705 -111903060 - L1MA6 LINE L1 -970 5534 5097 1194 163 0 0 chr10 28413705 28413907 -111902858 - L1PA4 LINE L1 -1 6154 5953 6380 209 84 76 chr10 28413907 28415582 -111901183 - L1MA6 LINE L1 -1407 5097 3240 3127 255 81 28 chr10 28415574 28417132 -111899633 - L1MA6 LINE L1 -4095 1255 74 * 653 248 22 63 chr10 28417278 28417500 -111899265 + L2 LINE L2 3084 3296 -17 537 110 0 0 chr10 28417502 28417584 -111899181 + (TGGA)n Simple_repeat Simple_repeat 3 84 0 1831 162 7 7 chr10 28417633 28417923 -111898842 + AluJo SINE Alu 1 290 -22 1757 187 3 3 chr10 28417932 28418279 -111898486 + AluJo SINE Alu 1 347 0 2516 71 0 0 chr10 28418639 28418936 -111897829 - AluSg SINE Alu -13 297 1 248 271 38 90 chr10 28418959 28418986 -111897779 - L2 LINE L2 0 3313 3286 1706 170 0 21 chr10 28418986 28419274 -111897491 + AluJo SINE Alu 1 282 -30 248 271 38 90 chr10 28419274 28419379 -111897386 - L2 LINE L2 -27 3286 3188 902 226 26 107 chr10 28419819 28420164 -111896601 - MLT1C LTR MaLR -2 465 149 2022 145 3 3 chr10 28420203 28420499 -111896266 - AluJo SINE Alu -16 296 1 694 173 49 37 chr10 28420500 28420662 -111896103 - MLT1C LTR MaLR -303 164 1 1688 189 13 0 chr10 28421209 28421515 -111895250 - AluJo SINE Alu -2 310 1 189 296 153 10 chr10 28421611 28421709 -111895056 + MIR3 SINE MIR 87 198 -10 235 231 0 0 chr10 28422010 28422062 -111894703 - L3b LINE CR1 -1 1582 1531 198 114 29 0 chr10 28423263 28423298 -111893467 + MIR SINE MIR 105 140 -122 336 24 0 0 chr10 28423741 28423782 -111892983 + (CA)n Simple_repeat Simple_repeat 1 41 0 371 304 29 36 chr10 28423987 28424114 -111892651 - L2 LINE L2 -26 3246 3119 1530 199 14 0 chr10 28424114 28424405 -111892360 + AluJo SINE Alu 3 297 -15 1476 148 19 53 chr10 28424905 28425168 -111891597 + AluJo SINE Alu 11 264 -48 1811 105 10 85 chr10 28425224 28425519 -111891246 - AluSx SINE Alu -1 311 39 2389 88 7 0 chr10 28426642 28426980 -111889785 - AluY SINE Alu 0 340 1 347 151 4 0 chr10 28427001 28427076 -111889689 - Alu SINE Alu 0 302 249 1692 175 11 0 chr10 28428132 28428441 -111888324 + AluJo SINE Alu 1 312 0 1113 159 0 0 chr10 28428821 28428991 -111887774 + FRAM SINE Alu 1 170 -6 1901 164 0 0 chr10 28430137 28430447 -111886318 + AluSx SINE Alu 3 312 0 1053 212 47 74 chr10 28431230 28431569 -111885196 - MER87 LTR ERV1 -1 540 211 694 155 17 0 chr10 28431757 28431873 -111884892 + FLAM_A SINE Alu 4 121 -12 1653 199 4 0 chr10 28431887 28432168 -111884597 - AluSx SINE Alu -30 282 1 29 47 0 0 chr10 28432168 28432211 -111884554 + AT_rich Low_complexity Low_complexity 1 43 0 845 88 9 0 chr10 28432388 28432501 -111884264 + AluJb SINE Alu 169 282 -30 34 42 0 0 chr10 28432502 28432550 -111884215 + AT_rich Low_complexity Low_complexity 1 48 0 195 42 0 0 chr10 28432763 28432787 -111883978 + (CCG)n Simple_repeat Simple_repeat 2 25 0 266 121 0 17 chr10 28432895 28432953 -111883812 + (CCCCCG)n Simple_repeat Simple_repeat 5 61 0 21 0 0 0 chr10 28433797 28433818 -111882947 + AT_rich Low_complexity Low_complexity 1 21 0 963 155 72 43 chr10 28435372 28435445 -111881320 - MER30 DNA MER1_type -17 213 144 1664 198 0 3 chr10 28435445 28435733 -111881032 + AluSx SINE Alu 1 287 -25 963 155 72 43 chr10 28435733 28435866 -111880899 - MER30 DNA MER1_type -86 144 1 541 151 0 21 chr10 28436170 28436263 -111880502 + MER65B LTR ERV1 1 91 -440 347 308 139 31 chr10 28436910 28437335 -111879430 - L1MEc LINE L1 -3526 2689 2219 1891 164 0 16 chr10 28437335 28437652 -111879113 - AluJo SINE Alu 0 312 1 243 79 0 0 chr10 28437932 28437970 -111878795 + (CA)n Simple_repeat Simple_repeat 1 38 0 493 299 120 28 chr10 28438003 28438544 -111878221 - L1MEc LINE L1 -4734 1662 1072 2450 159 21 7 chr10 28438559 28438993 -111877772 - L1MC1 LINE L1 0 6333 5894 3314 244 44 35 chr10 28438994 28440086 -111876679 - L1M4 LINE L1 -793 5353 4252 296 228 37 90 chr10 28440419 28440608 -111876157 + L1M4 LINE L1 3878 4056 -2090 1106 273 58 17 chr10 28440635 28440983 -111875782 - MER74A LTR ERVL -17 541 180 849 224 18 0 chr10 28441051 28441221 -111875544 - MER74A LTR ERVL -385 173 1 2162 163 44 21 chr10 28441621 28442050 -111874715 + Tigger6a DNA MER2_type 38 476 -607 234 215 190 0 chr10 28442081 28442160 -111874605 + L1MC5 LINE L1 7287 7380 -581 2370 142 61 17 chr10 28442161 28442535 -111874230 - MSTB LTR MaLR 0 426 31 1698 152 72 36 chr10 28442535 28442897 -111873868 - THE1C LTR MaLR 0 375 1 2370 142 61 17 chr10 28442897 28442930 -111873835 - MSTB LTR MaLR -395 31 1 251 169 52 26 chr10 28442939 28443016 -111873749 + L1MC5 LINE L1 7382 7460 -501 2125 121 0 0 chr10 28443171 28443479 -111873286 + AluSg1 SINE Alu 1 308 0 309 188 70 86 chr10 28443517 28443703 -111873062 + L1MC5 LINE L1 7603 7785 -176 354 203 47 68 chr10 28443744 28443892 -111872873 + L1MC5 LINE L1 7787 7931 -30 2094 118 0 20 chr10 28444005 28444302 -111872463 - AluSq SINE Alu -22 291 1 1519 162 12 0 chr10 28444827 28445074 -111871691 + AluSx SINE Alu 36 285 -27 218 103 0 26 chr10 28445973 28446012 -111870753 + (TA)n Simple_repeat Simple_repeat 2 39 0 600 226 8 0 chr10 28447318 28447442 -111869323 - AluSq/x SINE Alu -186 126 2 216 308 38 15 chr10 28447886 28447992 -111868773 + MIR SINE MIR 44 152 -56 182 147 29 0 chr10 28449802 28449836 -111866929 + MIR SINE MIR 118 152 -56 180 147 29 0 chr10 28451677 28451711 -111865054 + MIR SINE MIR 118 152 -56 180 147 29 0 chr10 28453516 28453550 -111863215 + MIR SINE MIR 118 152 -56 1528 162 0 0 chr10 28453679 28453907 -111862858 - AluSx SINE Alu -84 228 1 237 344 115 13 chr10 28454140 28454297 -111862468 + MIR SINE MIR 24 196 -66 847 193 6 6 chr10 28456337 28456503 -111860262 - L1PB1 LINE L1 -2 6149 5984 1681 179 0 10 chr10 28456507 28456803 -111859962 - AluSx SINE Alu -19 293 1 183 42 0 0 chr10 28457237 28457261 -111859504 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2103 142 0 0 chr10 28457365 28457674 -111859091 - AluSc SINE Alu 0 309 1 25 0 0 0 chr10 28458020 28458045 -111858720 + AT_rich Low_complexity Low_complexity 1 25 0 1778 199 0 0 chr10 28458383 28458690 -111858075 + AluJo SINE Alu 1 307 -5 1848 149 14 3 chr10 28459847 28460142 -111856623 + AluJb SINE Alu 12 309 -3 2144 109 0 3 chr10 28460142 28460463 -111856302 + AluSg SINE Alu 1 320 0 627 126 107 0 chr10 28460624 28460727 -111856038 + AluJb SINE Alu 169 282 -30 32 43 0 0 chr10 28460729 28460775 -111855990 + AT_rich Low_complexity Low_complexity 1 46 0 238 65 0 0 chr10 28461269 28461300 -111855465 - MER30 DNA MER1_type -199 31 1 1530 108 14 0 chr10 28461538 28461751 -111855014 - L1PA10 LINE L1 -5 6163 5948 590 118 0 21 chr10 28461838 28461931 -111854834 + MER65B LTR ERV1 1 91 -440 414 294 58 38 chr10 28462537 28463012 -111853753 - L1M4 LINE L1 -3478 2668 2148 1859 164 6 10 chr10 28463021 28463333 -111853432 - AluJo SINE Alu -1 311 1 1780 179 0 7 chr10 28463424 28463720 -111853045 - AluSx SINE Alu -18 294 1 2177 111 0 3 chr10 28463731 28464028 -111852737 - AluSx SINE Alu -16 296 1 2219 93 3 56 chr10 28464181 28464505 -111852260 - AluSc SINE Alu -2 307 1 2034 130 13 3 chr10 28464707 28465006 -111851759 + AluSg SINE Alu 1 302 -8 746 204 32 55 chr10 28465136 28465356 -111851409 + L2 LINE L2 3098 3312 -1 23 0 0 0 chr10 28465467 28465490 -111851275 + AT_rich Low_complexity Low_complexity 1 23 0 243 299 77 29 chr10 28466668 28466875 -111849890 + L1MEc LINE L1 2240 2456 -3940 2076 105 0 20 chr10 28467095 28467389 -111849376 + AluSx SINE Alu 23 310 -2 330 0 0 24 chr10 28468019 28468061 -111848704 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 1684 178 0 11 chr10 28468061 28468348 -111848417 - AluJb SINE Alu -29 283 1 308 244 100 0 chr10 28468627 28468717 -111848048 - MIR SINE MIR -111 151 53 838 204 0 0 chr10 28468794 28468951 -111847814 - FRAM SINE Alu -18 158 2 24 0 0 0 chr10 28469841 28469865 -111846900 + AT_rich Low_complexity Low_complexity 1 24 0 2941 170 33 27 chr10 28469983 28470530 -111846235 - MER44D DNA MER2_type 0 605 1 218 307 251 7 chr10 28470796 28471083 -111845682 + L3b LINE CR1 1112 1468 -115 1757 136 58 0 chr10 28471478 28471772 -111844993 + L1PA16 LINE L1 5523 5833 -333 * 1884 43 0 9 chr10 28471767 28472000 -111844765 - L1PA4 LINE L1 -79 6076 5846 664 43 0 33 chr10 28472000 28472082 -111844683 + L1PA4 LINE L1 6067 6155 0 2163 115 68 0 chr10 28472090 28472412 -111844353 + L1PA16 LINE L1 5814 6157 -9 26 30 0 0 chr10 28472412 28472445 -111844320 + AT_rich Low_complexity Low_complexity 1 33 0 286 301 51 64 chr10 28472746 28472902 -111843863 - L2 LINE L2 -1 3271 3118 180 308 94 8 chr10 28473320 28473437 -111843328 - L2 LINE L2 -1276 2038 1912 353 116 0 128 chr10 28473523 28473609 -111843156 + L1PA8 LINE L1 6098 6172 0 21 57 0 0 chr10 28474522 28474557 -111842208 + AT_rich Low_complexity Low_complexity 1 35 0 3017 137 35 4 chr10 28474640 28475131 -111841634 + L1MA9 LINE L1 5802 6307 -5 1914 104 6 130 chr10 28475351 28475696 -111841069 + AluSq SINE Alu 1 302 -1 38 0 0 0 chr10 28475697 28475735 -111841030 + AT_rich Low_complexity Low_complexity 1 38 0 832 172 8 0 chr10 28476384 28476506 -111840259 + FLAM_C SINE Alu 2 124 -19 340 261 60 45 chr10 28476774 28476817 -111839948 - MIR3 SINE MIR -17 191 150 1755 137 9 70 chr10 28476817 28477145 -111839620 - AluJo SINE Alu -4 308 1 340 261 60 45 chr10 28477145 28477235 -111839530 - MIR3 SINE MIR -58 150 56 819 216 0 0 chr10 28477694 28477847 -111838918 + MLT1A1 LTR MaLR 1 153 -212 2498 65 7 0 chr10 28478241 28478548 -111838217 + AluY SINE Alu 1 309 -2 1342 203 29 14 chr10 28478730 28479011 -111837754 - AluJo SINE Alu -12 300 16 391 367 77 0 chr10 28479099 28479295 -111837470 + MIR SINE MIR 52 262 0 236 368 30 77 chr10 28479322 28479412 -111837353 + L2 LINE L2 2989 3082 -190 3042 91 66 5 chr10 28479412 28479839 -111836926 + MLT2A2 LTR ERVL 1 453 0 236 368 30 77 chr10 28479839 28479982 -111836783 + L2 LINE L2 3082 3211 -61 2130 123 0 3 chr10 28480457 28480767 -111835998 + AluSx SINE Alu 1 309 -3 1812 109 0 116 chr10 28480767 28481118 -111835647 + AluSx SINE Alu 1 315 0 197 105 0 26 chr10 28482085 28482123 -111834642 + (TA)n Simple_repeat Simple_repeat 1 37 0 695 208 0 0 chr10 28483348 28483473 -111833292 - FLAM_C SINE Alu -17 126 2 276 336 47 16 chr10 28483914 28484042 -111832723 + MIR SINE MIR 48 179 -83 691 208 0 0 chr10 28486215 28486340 -111830425 - AluJb SINE Alu -186 126 2 403 296 153 6 chr10 28486753 28486929 -111829836 + MIR SINE MIR 24 225 -37 693 224 0 0 chr10 28488781 28488906 -111827859 - FLAM_C SINE Alu -17 126 2 263 304 43 26 chr10 28489341 28489456 -111827309 + MIR SINE MIR 36 152 -56 181 196 54 36 chr10 28491226 28491282 -111825483 + MIR3 SINE MIR 116 172 -36 814 201 18 6 chr10 28493462 28493626 -111823139 - L1PB1 LINE L1 -2 6149 5984 1558 192 0 10 chr10 28493630 28493927 -111822838 - AluSx SINE Alu -18 294 1 2083 112 0 0 chr10 28494453 28494781 -111821984 - AluSc SINE Alu 0 328 1 1354 209 0 0 chr10 28495424 28495677 -111821088 + AluJo SINE Alu 53 305 -7 1859 155 3 0 chr10 28496817 28497107 -111819658 + AluJb SINE Alu 3 293 -19 2057 100 4 4 chr10 28497107 28497440 -111819325 + AluSg SINE Alu 1 333 0 655 123 75 0 chr10 28497604 28497710 -111819055 + AluJb SINE Alu 169 282 -30 28 61 0 0 chr10 28497712 28497761 -111819004 + AT_rich Low_complexity Low_complexity 1 49 0 2613 51 0 6 chr10 28498409 28498720 -111818045 - AluY SINE Alu -2 309 1 730 160 216 44 chr10 28499054 28499131 -111817634 - MER30 DNA MER1_type -17 213 151 1897 147 3 3 chr10 28499131 28499416 -111817349 + AluSx SINE Alu 5 289 -23 730 160 216 44 chr10 28499416 28499519 -111817246 - MER30 DNA MER1_type -79 151 2 1552 116 14 0 chr10 28499766 28499973 -111816792 - L1PA10 LINE L1 -11 6157 5948 576 129 0 21 chr10 28500060 28500153 -111816612 + MER65B LTR ERV1 1 91 -440 386 296 148 30 chr10 28500758 28501224 -111815541 - L1MEc LINE L1 -3478 2737 2217 1746 175 10 3 chr10 28501241 28501549 -111815216 - AluJo SINE Alu -2 310 1 204 40 0 0 chr10 28501839 28501864 -111814901 + (CA)n Simple_repeat Simple_repeat 2 26 0 369 0 0 0 chr10 28502026 28502067 -111814698 + (CA)n Simple_repeat Simple_repeat 2 42 0 502 281 123 38 chr10 28502072 28502655 -111814110 - L1MEc LINE L1 -4708 1688 1056 2739 167 27 2 chr10 28502659 28503138 -111813627 - L1MC1 LINE L1 0 6333 5843 1102 219 190 11 chr10 28503138 28503517 -111813248 - MSTB2 LTR MaLR -10 447 1 418 152 0 51 chr10 28503548 28503627 -111813138 - AluS SINE Alu -10 301 227 3917 202 29 37 chr10 28503627 28505220 -111811545 - L1MC1 LINE L1 -519 5825 4252 291 264 54 72 chr10 28505550 28505717 -111811048 + L1P LINE L1 3878 4041 -2105 1509 223 19 22 chr10 28505759 28506127 -111810638 - MER74A LTR ERVL -13 545 179 902 199 36 0 chr10 28506177 28506343 -111810422 - MER74A LTR ERVL -386 172 1 2071 181 67 0 chr10 28506715 28507119 -111809646 + Tigger6a DNA MER2_type 38 468 -615 229 180 140 20 chr10 28507110 28507160 -111809605 + Tigger6a DNA MER2_type 707 762 -321 * 2186 156 68 29 chr10 28507237 28507613 -111809152 - MSTB LTR MaLR 0 426 31 1832 140 76 36 chr10 28507613 28507970 -111808795 - THE1C LTR MaLR -4 371 1 2186 156 68 29 chr10 28507970 28508003 -111808762 - MSTB LTR MaLR -395 31 1 518 206 31 140 chr10 28508003 28508425 -111808340 + L1MC5 LINE L1 7377 7752 -209 317 255 14 55 chr10 28508496 28508641 -111808124 + L1MC5 LINE L1 7790 7928 -33 1803 129 0 14 chr10 28509238 28509518 -111807247 + AluSx SINE Alu 36 311 -1 375 327 18 6 chr10 28511089 28511257 -111805508 + MER117 DNA MER1_type 2 171 -26 289 251 0 135 chr10 28511448 28511541 -111805224 - L1ME3A LINE L1 -223 5947 5884 1655 158 32 7 chr10 28511541 28511820 -111804945 + AluJo SINE Alu 1 286 -26 289 251 0 135 chr10 28511820 28511889 -111804876 - L1ME3A LINE L1 -286 5884 5807 312 250 107 36 chr10 28511896 28512036 -111804729 + L1MEd LINE L1 561 710 -5409 24 32 0 0 chr10 28512245 28512276 -111804489 + AT_rich Low_complexity Low_complexity 1 31 0 1661 83 0 0 chr10 28513379 28513595 -111803170 + AluSq SINE Alu 5 220 -93 408 179 0 0 chr10 28513968 28514035 -111802730 - AluSq/x SINE Alu -191 122 56 1715 164 30 20 chr10 28514069 28514433 -111802332 + AluJo SINE Alu 1 367 0 2291 102 10 0 chr10 28514628 28514933 -111801832 + AluSx SINE Alu 1 308 -4 1940 152 0 7 chr10 28515420 28515710 -111801055 - AluSx SINE Alu -22 290 3 2041 120 7 7 chr10 28515722 28516021 -111800744 - AluSx SINE Alu -13 299 1 1389 101 0 0 chr10 28516363 28516542 -111800223 + AluSg SINE Alu 1 179 -131 264 243 15 36 chr10 28516718 28516825 -111799940 + Alu SINE Alu 233 280 -20 1170 118 6 0 chr10 28516994 28517155 -111799610 - AluSq SINE Alu -18 295 134 2553 45 0 19 chr10 28517155 28517469 -111799296 - AluYb8 SINE Alu -10 308 1 256 167 13 13 chr10 28517755 28517833 -111798932 + (TA)n Simple_repeat Simple_repeat 2 79 0 232 274 131 24 chr10 28517914 28517961 -111798804 - MIR SINE MIR -1 261 220 2322 89 0 0 chr10 28517961 28518252 -111798513 - AluSg SINE Alu -7 303 13 232 274 131 24 chr10 28518252 28518288 -111798477 - MIR SINE MIR -42 220 169 392 184 149 0 chr10 28518347 28518461 -111798304 + L1MB7 LINE L1 6045 6175 -9 1783 163 3 3 chr10 28519427 28519439 -111797326 - AluJo SINE Alu 0 312 301 184 42 0 0 chr10 28519439 28519463 -111797302 + (TTTG)n Simple_repeat Simple_repeat 1 172 0 1783 163 3 3 chr10 28519463 28519745 -111797020 - AluJo SINE Alu -10 302 1 1590 203 16 16 chr10 28519802 28520112 -111796653 + AluJb SINE Alu 1 310 -2 2216 100 0 0 chr10 28520286 28520576 -111796189 + AluSq SINE Alu 1 290 -23 345 243 103 44 chr10 28520605 28520741 -111796024 - MIR SINE MIR -115 147 4 1117 103 0 0 chr10 28520904 28521060 -111795705 + AluY SINE Alu 136 291 -20 1032 90 0 0 chr10 28521073 28521218 -111795547 + (GGAA)n Simple_repeat Simple_repeat 4 148 0 1699 156 42 10 chr10 28521621 28521910 -111794855 + AluJb SINE Alu 1 298 -14 846 172 12 25 chr10 28521914 28522077 -111794688 + AluJo SINE Alu 1 161 -151 604 226 34 72 chr10 28522077 28522285 -111794480 + L2 LINE L2 3113 3312 -1 196 308 64 13 chr10 28522616 28522694 -111794071 - L2 LINE L2 -59 3254 3173 331 299 97 37 chr10 28523582 28524014 -111792751 + L1MEc LINE L1 2110 2567 -3579 2008 116 0 7 chr10 28524026 28524302 -111792463 + AluSx SINE Alu 24 297 -15 1662 182 0 11 chr10 28525009 28525327 -111791438 - AluJb SINE Alu 0 315 1 317 267 88 18 chr10 28525603 28525722 -111791043 - MIR SINE MIR -61 147 21 880 204 0 0 chr10 28525771 28525928 -111790837 - FRAM SINE Alu -19 157 1 24 0 0 0 chr10 28526820 28526844 -111789921 + AT_rich Low_complexity Low_complexity 1 24 0 2941 167 37 28 chr10 28526962 28527507 -111789258 - MER44D DNA MER2_type 0 605 1 214 318 269 7 chr10 28527774 28528060 -111788705 + L3b LINE CR1 1112 1472 -111 3863 128 55 0 chr10 28528454 28529053 -111787712 + L1PA16 LINE L1 5523 6154 -12 204 97 0 0 chr10 28529058 28529089 -111787676 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 258 320 51 64 chr10 28529396 28529552 -111787213 - L2 LINE L2 -1 3271 3118 181 274 120 34 chr10 28529970 28530087 -111786678 - L2 LINE L2 -1276 2038 1912 3003 144 41 4 chr10 28531166 28531659 -111785106 + L1MA9 LINE L1 5802 6312 0 1955 114 0 57 chr10 28531872 28532225 -111784540 + AluY SINE Alu 1 311 0 1865 127 6 73 chr10 28532233 28532547 -111784218 + AluSq SINE Alu 1 293 -20 32 0 0 0 chr10 28532602 28532634 -111784131 + AT_rich Low_complexity Low_complexity 1 32 0 800 169 8 0 chr10 28533286 28533404 -111783361 + FLAM_C SINE Alu 2 120 -23 359 301 45 57 chr10 28533673 28533715 -111783050 - MIR3 SINE MIR -17 191 150 1696 158 3 47 chr10 28533715 28534072 -111782693 - AluJo SINE Alu 0 344 1 359 301 45 57 chr10 28534072 28534204 -111782561 - MIR3 SINE MIR -58 150 18 2148 184 17 0 chr10 28534622 28534981 -111781784 + MLT1A1 LTR MaLR 1 365 0 2307 96 51 61 chr10 28535054 28535309 -111781456 + L1PA11 LINE L1 5802 6058 -116 792 173 0 43 chr10 28535309 28535448 -111781317 + FLAM_C SINE Alu 1 133 0 1314 171 171 0 chr10 28535454 28535725 -111781040 + AluSx SINE Alu 3 314 0 2307 96 51 61 chr10 28535725 28535836 -111780929 + L1PA11 LINE L1 6063 6172 -2 249 122 20 0 chr10 28535992 28536041 -111780724 - MIR SINE MIR -49 213 164 1551 175 43 0 chr10 28536406 28536686 -111780079 - AluJb SINE Alu -20 292 1 832 191 0 19 chr10 28537197 28537354 -111779411 - AluJb SINE Alu -2 310 157 23 0 0 0 chr10 28537433 28537456 -111779309 + AT_rich Low_complexity Low_complexity 1 23 0 22 70 0 0 chr10 28537835 28537878 -111778887 + AT_rich Low_complexity Low_complexity 1 43 0 423 0 0 0 chr10 28538317 28538364 -111778401 + (TA)n Simple_repeat Simple_repeat 2 48 0 2137 112 3 0 chr10 28538366 28538653 -111778112 - AluSq SINE Alu -25 288 1 372 280 212 15 chr10 28539161 28539425 -111777340 + L1M4 LINE L1 4519 4834 -1312 1516 184 10 33 chr10 28540364 28540669 -111776096 - AluJo SINE Alu -14 298 1 2142 123 7 3 chr10 28541129 28541429 -111775336 - AluSx SINE Alu -7 305 5 315 276 128 100 chr10 28542756 28543234 -111773531 - L1M2 LINE L1 -5701 1148 658 1797 158 0 35 chr10 28544113 28544424 -111772341 + AluJo SINE Alu 1 300 -12 2257 109 0 6 chr10 28544657 28544969 -111771796 - AluSx SINE Alu -2 310 1 499 141 40 20 chr10 28545437 28545536 -111771229 - FLAM_C SINE Alu -3 140 40 805 126 0 0 chr10 28545595 28545706 -111771059 + FLAM_C SINE Alu 1 111 -32 1853 123 33 74 chr10 28545707 28546098 -111770667 + THE1C LTR MaLR 1 375 0 9663 112 66 8 chr10 28546101 28547592 -111769173 + THE1C-int LTR MaLR 4 1580 0 1899 143 66 39 chr10 28547593 28547957 -111768808 + THE1C LTR MaLR 2 375 0 884 153 0 0 chr10 28547967 28548098 -111768667 + FRAM SINE Alu 1 123 -53 283 295 21 0 chr10 28548311 28548406 -111768359 - MIR SINE MIR -16 246 150 183 283 57 19 chr10 28548432 28548485 -111768280 - MIR SINE MIR -197 65 11 398 185 0 0 chr10 28548633 28548698 -111768067 + AluJ/FLAM SINE Alu 1 65 -237 2615 48 0 3 chr10 28549054 28549365 -111767400 + AluY SINE Alu 2 311 0 376 245 43 29 chr10 28549386 28549525 -111767240 - L1ME4a LINE L1 -17 6104 5964 29 21 0 21 chr10 28550056 28550083 -111766682 + AT_rich Low_complexity Low_complexity 1 28 -18 701 153 48 16 chr10 28550083 28550207 -111766558 - FLAM_C SINE Alu -5 128 1 29 21 0 21 chr10 28550207 28550226 -111766539 + AT_rich Low_complexity Low_complexity 28 46 0 30 27 0 0 chr10 28550721 28550758 -111766007 + AT_rich Low_complexity Low_complexity 1 37 0 1930 132 0 0 chr10 28550761 28551026 -111765739 - AluSx SINE Alu -24 288 24 834 189 0 38 chr10 28551401 28551560 -111765205 + FRAM SINE Alu 4 156 -20 322 152 0 0 chr10 28551562 28551608 -111765157 + Alu SINE Alu 1 46 -255 4063 142 29 4 chr10 28552076 28552772 -111763993 - MER50 LTR ERV1 -20 714 2 342 252 139 9 chr10 28553379 28553494 -111763271 + L2 LINE L2 3141 3270 -2 652 134 0 45 chr10 28554015 28554127 -111762638 + FRAM SINE Alu 69 175 -1 2337 94 0 3 chr10 28554551 28554850 -111761915 + AluSq SINE Alu 1 298 -15 2250 105 3 10 chr10 28555144 28555450 -111761315 + AluSg SINE Alu 1 304 -6 837 235 199 35 chr10 28555901 28556267 -111760498 + LTR16A LTR ERVL 25 450 0 2173 110 27 3 chr10 28556327 28556628 -111760137 + AluSx SINE Alu 1 308 -4 2194 104 28 0 chr10 28557541 28557829 -111758936 - AluSx SINE Alu -14 298 3 21 0 0 56 chr10 28558528 28558548 -111758217 + AT_rich Low_complexity Low_complexity 1 20 -14 1979 135 17 0 chr10 28558548 28558837 -111757928 + AluSx SINE Alu 1 294 -18 21 0 0 56 chr10 28558837 28558852 -111757913 + AT_rich Low_complexity Low_complexity 20 34 0 2158 123 0 3 chr10 28559355 28559665 -111757100 - AluSx SINE Alu -2 310 2 2004 128 17 0 chr10 28560176 28560464 -111756301 - AluSx SINE Alu -6 306 14 2362 109 0 0 chr10 28560613 28560916 -111755849 + AluSq SINE Alu 1 303 -10 2061 121 17 3 chr10 28561625 28561914 -111754851 + AluSx SINE Alu 2 294 -18 21 0 0 0 chr10 28562660 28562681 -111754084 + AT_rich Low_complexity Low_complexity 1 21 0 2097 110 31 7 chr10 28563160 28563450 -111753315 + AluSx SINE Alu 1 297 -15 366 23 0 0 chr10 28563561 28563604 -111753161 + (CA)n Simple_repeat Simple_repeat 2 44 0 2058 138 3 0 chr10 28564572 28564870 -111751895 + AluSx SINE Alu 1 299 -13 317 305 105 24 chr10 28565322 28565532 -111751233 - L2 LINE L2 -189 3083 2857 216 349 12 0 chr10 28565529 28565615 -111751150 + MIR3 SINE MIR 98 184 -24 * 1943 161 0 16 chr10 28566710 28567027 -111749738 - AluSx SINE Alu 0 312 1 804 164 0 16 chr10 28567944 28568072 -111748693 + FLAM_C SINE Alu 2 127 -16 2212 103 7 0 chr10 28568929 28569220 -111747545 + AluSx SINE Alu 1 293 -19 220 309 24 12 chr10 28569364 28569448 -111747317 - MIR SINE MIR -79 129 45 1260 96 0 12 chr10 28569633 28569800 -111746965 - AluSg/x SINE Alu -4 306 142 1486 208 68 25 chr10 28569826 28570220 -111746545 - L1MC4 LINE L1 -283 7759 7349 1081 98 0 0 chr10 28570221 28570354 -111746411 + AluSq/x SINE Alu 1 133 -179 2198 107 7 0 chr10 28570357 28570648 -111746117 + AluSq SINE Alu 1 293 -20 311 193 176 0 chr10 28570653 28570802 -111745963 - L1MC4 LINE L1 -690 7352 7108 2112 124 3 7 chr10 28571212 28571519 -111745246 - AluSx SINE Alu -6 306 1 1942 197 150 110 chr10 28571522 28572202 -111744563 - L1MC4a LINE L1 -848 6960 6309 845 71 94 0 chr10 28572202 28572329 -111744436 - MER85 DNA T2_type 0 139 1 1942 197 150 110 chr10 28572329 28572344 -111744421 - L1MC4a LINE L1 -1499 6309 6296 2619 46 0 0 chr10 28572344 28572648 -111744117 - AluY SINE Alu -7 304 1 1942 197 150 110 chr10 28572648 28572764 -111744001 - L1MC4a LINE L1 -1512 6296 6186 2058 139 7 3 chr10 28572764 28573074 -111743691 + AluJb SINE Alu 1 311 -1 1942 197 150 110 chr10 28573074 28573361 -111743404 - L1MC4a LINE L1 -1622 6186 5816 976 53 0 0 chr10 28573383 28573496 -111743269 + AluSg SINE Alu 21 133 -177 2092 122 3 0 chr10 28573496 28573784 -111742981 + AluSx SINE Alu 1 289 -23 34 0 0 0 chr10 28573784 28573818 -111742947 + AT_rich Low_complexity Low_complexity 1 34 0 1179 269 92 9 chr10 28573822 28574246 -111742519 - L1MC4a LINE L1 -2001 5807 5349 1136 78 0 0 chr10 28574250 28574392 -111742373 - AluSg/x SINE Alu -34 278 137 327 291 78 8 chr10 28574963 28575152 -111741613 + MIR SINE MIR 13 261 -1 1858 81 135 0 chr10 28575275 28575534 -111741231 + AluSx SINE Alu 1 294 -18 1872 157 7 3 chr10 28576129 28576416 -111740349 + AluJo SINE Alu 1 288 -24 489 269 126 9 chr10 28576421 28576644 -111740121 - MIR SINE MIR 0 262 14 296 263 60 45 chr10 28578135 28578268 -111738497 + MIR SINE MIR 58 192 -70 2297 75 31 3 chr10 28579895 28580188 -111736577 + AluSg SINE Alu 9 309 -1 344 298 163 0 chr10 28580681 28580859 -111735906 - MIR SINE MIR -55 207 1 1715 135 53 18 chr10 28582156 28582291 -111734474 + AluJo SINE Alu 1 130 -182 2217 89 10 35 chr10 28582291 28582604 -111734161 + AluY SINE Alu 1 305 -6 1715 135 53 18 chr10 28582604 28582749 -111734016 + AluJo SINE Alu 130 291 -21 539 232 11 89 chr10 28583496 28583639 -111733126 + MER5B DNA MER1_type 4 130 -48 2050 117 6 31 chr10 28583639 28583956 -111732809 + AluSx SINE Alu 1 309 -3 539 232 11 89 chr10 28583956 28584002 -111732763 + MER5B DNA MER1_type 130 178 0 360 229 153 59 chr10 28584138 28584308 -111732457 + MER5A DNA MER1_type 1 186 -3 2292 93 3 7 chr10 28584313 28584613 -111732152 - AluSx SINE Alu -13 299 1 290 333 0 10 chr10 28585215 28585311 -111731454 - MER5B DNA MER1_type -83 95 1 324 290 115 40 chr10 28586212 28586797 -111729968 + HAL1 LINE L1 773 1312 -1195 268 22 44 22 chr10 28586797 28586842 -111729923 + (TTTTA)n Simple_repeat Simple_repeat 2 47 0 2141 72 7 4 chr10 28586846 28587123 -111729642 - AluSc SINE Alu -31 278 1 324 290 115 40 chr10 28587123 28587201 -111729564 + HAL1 LINE L1 1314 1748 -759 1679 182 0 11 chr10 28587359 28587685 -111729080 - AluJb SINE Alu 0 323 1 327 267 88 18 chr10 28587961 28588080 -111728685 - MIR SINE MIR -61 147 21 892 204 0 0 chr10 28588129 28588286 -111728479 - FRAM SINE Alu -19 157 1 24 0 0 0 chr10 28589178 28589202 -111727563 + AT_rich Low_complexity Low_complexity 1 24 0 2683 167 37 28 chr10 28589319 28589864 -111726901 - MER44D DNA MER2_type 0 605 1 244 318 269 7 chr10 28590131 28590417 -111726348 + L3b LINE CR1 1112 1472 -111 3557 128 46 0 chr10 28590823 28591410 -111725355 + L1PA16 LINE L1 5541 6154 -12 204 97 0 0 chr10 28591415 28591446 -111725319 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 274 320 51 64 chr10 28591753 28591909 -111724856 - L2 LINE L2 -1 3271 3118 186 274 120 34 chr10 28592327 28592444 -111724321 - L2 LINE L2 -1276 2038 1912 2741 144 41 4 chr10 28593523 28594016 -111722749 + L1MA9 LINE L1 5802 6312 0 2191 83 0 62 chr10 28594229 28594554 -111722211 + AluY SINE Alu 1 305 -6 244 204 86 54 chr10 28594828 28594921 -111721844 + HAL1 LINE L1 2218 2313 -194 2379 104 3 0 chr10 28594928 28595236 -111721529 + AluSx SINE Alu 1 309 -3 1875 132 58 23 chr10 28598688 28599036 -111717729 - MER46B DNA MER2_type 0 236 2 960 224 15 5 chr10 28599093 28599298 -111717467 + MER58A DNA MER1_type 17 223 -1 2153 109 7 0 chr10 28599587 28599881 -111716884 + AluSx SINE Alu 14 309 -3 413 153 0 59 chr10 28600356 28600441 -111716324 - Tigger5 DNA MER2_type -2 2321 2242 300 269 13 0 chr10 28600431 28600509 -111716256 + Tigger5 DNA MER2_type 2242 2320 -3 * 436 179 0 13 chr10 28600509 28600586 -111716179 - Tigger5 DNA MER2_type -2245 78 3 187 344 0 0 chr10 28603142 28603206 -111713559 - MIR SINE MIR -125 137 74 208 245 0 19 chr10 28603490 28603543 -111713222 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 1039 169 17 6 chr10 28603548 28603725 -111713040 - AluJo SINE Alu -50 262 84 203 57 86 0 chr10 28605221 28605256 -111711509 + A-rich Low_complexity Low_complexity 3 40 0 24 85 0 0 chr10 28605557 28605616 -111711149 + AT_rich Low_complexity Low_complexity 1 59 0 189 0 0 0 chr10 28606565 28606586 -111710179 + (CTA)n Simple_repeat Simple_repeat 3 23 0 2313 93 0 3 chr10 28607155 28607455 -111709310 + AluSq SINE Alu 10 308 -5 23 0 0 0 chr10 28609440 28609463 -111707302 + AT_rich Low_complexity Low_complexity 1 23 0 2303 110 3 0 chr10 28609969 28610278 -111706487 + AluSx SINE Alu 1 310 -2 1815 145 23 10 chr10 28610295 28610599 -111706166 - AluJo SINE Alu -4 308 1 23 0 0 0 chr10 28610836 28610859 -111705906 + AT_rich Low_complexity Low_complexity 1 23 0 438 108 0 0 chr10 28610979 28611044 -111705721 + (TA)n Simple_repeat Simple_repeat 1 65 0 362 263 112 13 chr10 28611065 28611297 -111705468 - L1ME3A LINE L1 -223 5947 5693 533 174 47 160 chr10 28611324 28611376 -111705389 - MER5A DNA MER1_type 0 189 133 1900 148 3 7 chr10 28611376 28611667 -111705098 - AluJo SINE Alu -22 290 1 533 174 47 160 chr10 28611667 28611827 -111704938 - MER5A DNA MER1_type -56 133 1 501 203 117 0 chr10 28611835 28611963 -111704802 - Charlie1 DNA MER1_type 0 2761 2619 * 845 252 78 0 chr10 28611956 28612162 -111704603 - Charlie1 DNA MER1_type -2534 227 6 601 293 30 26 chr10 28612167 28612437 -111704328 - L1ME3A LINE L1 -508 5656 5386 21 0 0 0 chr10 28612662 28612683 -111704082 + AT_rich Low_complexity Low_complexity 1 21 0 2152 132 9 12 chr10 28613965 28614307 -111702458 - MER2 DNA MER2_type 0 344 4 748 264 0 6 chr10 28614779 28614946 -111701819 + MER8 DNA MER2_type 2 167 -72 458 138 0 11 chr10 28614976 28615063 -111701702 + (GGGA)n Simple_repeat Simple_repeat 3 88 0 1825 159 33 12 chr10 28616077 28616410 -111700355 + MER58B DNA MER1_type 2 341 0 564 201 87 14 chr10 28616892 28617056 -111699709 + L1ME3A LINE L1 5983 6152 -18 25 21 0 43 chr10 28617103 28617124 -111699641 + AT_rich Low_complexity Low_complexity 1 21 -24 2183 104 3 0 chr10 28617124 28617411 -111699354 + AluSx SINE Alu 1 288 -24 25 21 0 43 chr10 28617411 28617436 -111699329 + AT_rich Low_complexity Low_complexity 21 45 0 2176 95 27 0 chr10 28617623 28617917 -111698848 + AluSp SINE Alu 1 302 -11 21 0 0 0 chr10 28619330 28619351 -111697414 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 28622073 28622096 -111694669 + AT_rich Low_complexity Low_complexity 1 23 0 1499 145 87 40 chr10 28622149 28622425 -111694340 + AluJb SINE Alu 1 289 -23 2002 118 38 0 chr10 28622572 28622859 -111693906 - AluSx SINE Alu -14 298 1 27 0 0 0 chr10 28622904 28622931 -111693834 + AT_rich Low_complexity Low_complexity 1 27 0 704 168 172 13 chr10 28623004 28623285 -111693480 + MER93b LTR ERV1 20 371 -2 1233 187 74 21 chr10 28623365 28623691 -111693074 + MER2 DNA MER2_type 1 343 -1 334 252 115 81 chr10 28624048 28624370 -111692395 + L1M4 LINE L1 5002 5334 -812 516 116 63 0 chr10 28624746 28624841 -111691924 + L1MB3 LINE L1 6082 6182 -1 268 284 27 0 chr10 28625207 28625281 -111691484 + (TATG)n Simple_repeat Simple_repeat 2 77 0 1839 155 21 0 chr10 28626857 28627141 -111689624 + AluJb SINE Alu 1 290 -22 21 0 0 0 chr10 28627574 28627595 -111689170 + AT_rich Low_complexity Low_complexity 1 21 0 349 298 66 16 chr10 28627705 28627826 -111688939 - L2 LINE L2 -587 2727 2601 1465 254 95 4 chr10 28628014 28628479 -111688286 + LTR40a LTR ERVL 8 514 -5 1245 244 48 96 chr10 28628485 28629593 -111687172 + HERVL40 LTR ERVL 1 1023 -4507 1367 156 0 30 chr10 28629604 28629835 -111686930 - AluJo SINE Alu -29 283 60 1449 289 52 12 chr10 28629838 28630412 -111686353 + HERVL40 LTR ERVL 1018 1614 -3916 4550 239 60 5 chr10 28630412 28631715 -111685050 + HERVL40 LTR ERVL 2526 3978 -1552 3656 146 103 27 chr10 28631717 28631803 -111684962 + L1MB2 LINE L1 5287 5365 -806 2336 92 0 0 chr10 28631803 28632098 -111684667 + AluSc SINE Alu 1 295 -14 3656 146 103 27 chr10 28632098 28632833 -111683932 + L1MB2 LINE L1 5365 6171 0 2046 218 148 39 chr10 28632843 28633466 -111683299 + HERVL40 LTR ERVL 3970 4660 -870 260 254 39 77 chr10 28633712 28633893 -111682872 + HERVL40 LTR ERVL 2456 2629 -408 401 356 36 0 chr10 28634068 28634377 -111682388 + MER89-int LTR ERV1 6179 6498 -303 * 1160 231 53 12 chr10 28634254 28634597 -111682168 + HERVL40 LTR ERVL 2780 5529 -1 1416 217 54 95 chr10 28634598 28634800 -111681965 + LTR40a LTR ERVL 1 210 -309 2125 123 0 10 chr10 28634800 28635101 -111681664 + AluSx SINE Alu 1 298 -14 1416 217 54 95 chr10 28635101 28635437 -111681328 + LTR40a LTR ERVL 210 517 -2 2016 110 7 20 chr10 28635581 28635880 -111680885 - AluSx SINE Alu -17 295 1 585 327 201 5 chr10 28636144 28636587 -111680178 + L2 LINE L2 2176 2705 -609 2357 118 6 8 chr10 28637345 28637701 -111679064 + THE1A LTR MaLR 1 355 0 2635 46 0 3 chr10 28637992 28638298 -111678467 + AluY SINE Alu 1 305 -6 6229 64 26 16 chr10 28638985 28639890 -111676875 - L1PA12 LINE L1 0 6168 5254 783 112 0 0 chr10 28639901 28640008 -111676757 - U6 snRNA snRNA 0 107 1 1932 167 7 7 chr10 28640148 28640453 -111676312 + AluJb SINE Alu 1 305 -7 428 285 122 15 chr10 28640809 28641212 -111675553 + L1ME3A LINE L1 4551 4996 -1150 392 233 26 78 chr10 28641229 28641422 -111675343 + L1ME3A LINE L1 5769 5951 -219 984 153 45 116 chr10 28643254 28643322 -111673443 + AluJb SINE Alu 85 156 -156 1982 136 36 3 chr10 28643322 28643624 -111673141 + AluSx SINE Alu 1 312 0 984 153 45 116 chr10 28643624 28643797 -111672968 + AluJb SINE Alu 156 309 -3 615 272 11 69 chr10 28643816 28644092 -111672673 + MIR SINE MIR 3 262 0 2257 106 7 0 chr10 28644223 28644525 -111672240 + AluSx SINE Alu 1 304 -8 492 229 29 29 chr10 28644527 28644702 -111672063 + HAL1 LINE L1 1383 1557 -950 2708 154 27 19 chr10 28644726 28645309 -111671456 + L1 LINE L1 4107 4694 -1452 300 120 0 0 chr10 28645311 28645361 -111671404 + AluSc SINE Alu 246 295 -4 586 177 0 0 chr10 28645370 28645466 -111671299 + AluJb SINE Alu 203 298 -14 873 229 46 57 chr10 28645470 28645632 -111671133 + L1MA9 LINE L1 5943 6105 -207 2001 136 31 43 chr10 28645632 28645984 -111670781 + MER7A DNA MER2_type 1 346 0 873 229 46 57 chr10 28645984 28646116 -111670649 + L1MA9 LINE L1 6105 6235 -77 1980 130 56 15 chr10 28646116 28646440 -111670325 - MER1B DNA MER1_type 0 337 1 873 229 46 57 chr10 28646440 28646493 -111670272 + L1MA9 LINE L1 6235 6287 -25 668 220 65 18 chr10 28646529 28646697 -111670068 + MIR SINE MIR 1 176 -86 607 288 33 33 chr10 28647305 28647604 -111669161 + L1MEd LINE L1 103 401 -5804 1775 188 45 19 chr10 28647604 28648024 -111668741 + MLT1D LTR MaLR 71 501 -4 248 242 78 16 chr10 28648196 28648324 -111668441 + L1MEd LINE L1 738 873 -5332 * 270 201 79 50 chr10 28648322 28648461 -111668304 + L1MEd LINE L1 2146 2288 -4108 23 33 0 0 chr10 28648616 28648646 -111668119 + AT_rich Low_complexity Low_complexity 1 30 0 189 0 0 0 chr10 28649366 28649387 -111667378 + (A)n Simple_repeat Simple_repeat 1 21 0 2201 104 0 3 chr10 28649463 28649762 -111667003 + AluSx SINE Alu 1 298 -14 407 206 0 0 chr10 28649764 28649856 -111666909 + L1MC4a LINE L1 7402 7493 -315 769 170 7 0 chr10 28649856 28649991 -111666774 + FLAM_C SINE Alu 1 136 -7 576 214 0 0 chr10 28649991 28650103 -111666662 + AluJb SINE Alu 183 294 -18 1926 90 93 0 chr10 28650109 28650377 -111666388 + AluSp SINE Alu 1 293 -20 852 234 97 50 chr10 28650380 28650626 -111666139 + L1MC4 LINE L1 7567 7833 -209 1986 157 3 0 chr10 28650626 28650931 -111665834 + AluJb SINE Alu 1 306 -6 852 234 97 50 chr10 28650931 28651004 -111665761 + L1MC4 LINE L1 7833 7901 -141 311 303 148 48 chr10 28652013 28652350 -111664415 - LTR33 LTR ERVL -143 378 8 249 326 135 35 chr10 28652401 28652631 -111664134 - L2 LINE L2 -211 3061 2809 370 304 0 51 chr10 28653146 28653284 -111663481 - L2 LINE L2 -24 3289 3159 23 33 0 0 chr10 28653356 28653386 -111663379 + AT_rich Low_complexity Low_complexity 1 30 0 2153 141 0 0 chr10 28653461 28653759 -111663006 + AluSx SINE Alu 1 298 -14 266 299 201 7 chr10 28654007 28654161 -111662604 - MIR SINE MIR -49 213 30 25 0 0 0 chr10 28654772 28654797 -111661968 + AT_rich Low_complexity Low_complexity 1 25 0 358 263 119 31 chr10 28656317 28656477 -111660288 - L1ME LINE L1 -5341 729 556 1888 139 0 30 chr10 28656552 28656853 -111659912 + AluJb SINE Alu 1 292 -20 895 249 120 59 chr10 28656863 28657170 -111659595 - L1ME LINE L1 -5540 530 180 2167 109 14 0 chr10 28657170 28657464 -111659301 + AluSx SINE Alu 1 298 -14 895 249 120 59 chr10 28657464 28657646 -111659119 - L1ME LINE L1 -5890 180 11 2015 106 0 4 chr10 28657828 28658101 -111658664 + AluSx SINE Alu 29 300 -12 2469 64 3 0 chr10 28658348 28658645 -111658120 + AluSx SINE Alu 1 298 -14 1570 193 3 3 chr10 28658660 28658945 -111657820 + AluJo SINE Alu 25 309 -3 955 234 79 69 chr10 28659119 28659575 -111657190 + MER21B LTR ERV1 295 739 -6 1023 221 9 18 chr10 28659863 28660089 -111656676 - MER58A DNA MER1_type 0 224 1 21 0 0 0 chr10 28660173 28660194 -111656571 + AT_rich Low_complexity Low_complexity 1 21 0 346 266 43 0 chr10 28660246 28660340 -111656425 + GA-rich Low_complexity Low_complexity 3 100 0 21 89 0 0 chr10 28660381 28660437 -111656328 + AT_rich Low_complexity Low_complexity 1 56 0 1059 218 123 35 chr10 28661224 28661624 -111655141 - MLT1D LTR MaLR -59 446 12 964 162 26 24 chr10 28661932 28662283 -111654482 - MLT1B LTR MaLR 0 390 3 2139 123 0 20 chr10 28662327 28662628 -111654137 + AluSx SINE Alu 1 295 -17 1359 171 81 8 chr10 28662961 28663346 -111653419 + Charlie1 DNA MER1_type 2343 2755 -6 438 333 36 31 chr10 28663571 28663766 -111652999 + MIR3 SINE MIR 3 198 -10 4217 197 46 34 chr10 28664889 28664989 -111651776 + Tigger6a DNA MER2_type 2 99 -1498 1682 187 3 14 chr10 28664989 28665278 -111651487 + AluJo SINE Alu 4 289 -23 4217 197 46 34 chr10 28665278 28666245 -111650520 + Tigger6a DNA MER2_type 99 1082 -1 306 0 0 0 chr10 28666347 28666381 -111650384 + (TG)n Simple_repeat Simple_repeat 1 34 0 1967 121 22 0 chr10 28666381 28666654 -111650111 - AluSx SINE Alu -33 279 1 260 245 0 0 chr10 28666837 28666890 -111649875 + AluSp SINE Alu 123 175 -128 907 157 30 45 chr10 28666891 28667089 -111649676 + L1MB3 LINE L1 5981 6175 -8 2074 111 0 10 chr10 28667234 28667522 -111649243 + AluSx SINE Alu 1 285 -27 377 263 32 70 chr10 28667604 28667695 -111649070 + L1MEc LINE L1 1787 1880 -4516 1947 115 29 70 chr10 28667695 28668008 -111648757 + AluSx SINE Alu 1 300 -12 377 263 32 70 chr10 28668008 28668061 -111648704 + L1MEc LINE L1 1880 1933 -4463 2102 110 0 36 chr10 28668061 28668369 -111648396 + AluSg1 SINE Alu 1 297 -12 377 263 32 70 chr10 28668369 28668539 -111648226 + L1MEc LINE L1 1933 2090 -4306 1703 232 29 64 chr10 28668625 28669077 -111647688 + L1MEc LINE L1 2384 2804 -3411 3315 124 19 55 chr10 28669077 28669700 -111647065 + L1MA9 LINE L1 5706 6306 -6 1703 232 29 64 chr10 28669700 28669946 -111646819 + L1MEc LINE L1 2804 3057 -3158 2275 84 10 14 chr10 28669947 28670244 -111646521 - AluSg1 SINE Alu -13 296 1 23 0 0 0 chr10 28670690 28670713 -111646052 + AT_rich Low_complexity Low_complexity 1 23 0 2318 90 3 32 chr10 28670887 28671198 -111645567 - AluSp SINE Alu -11 302 1 1930 184 3 7 chr10 28671313 28671623 -111645142 - AluJb SINE Alu -3 309 1 1846 151 3 10 chr10 28671680 28671962 -111644803 + AluJb SINE Alu 1 282 -30 198 33 33 0 chr10 28671962 28671992 -111644773 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 342 220 110 0 chr10 28672961 28673079 -111643686 - L1MB7 LINE L1 -9 6175 6045 212 319 163 28 chr10 28673080 28673174 -111643591 + MIR SINE MIR 102 223 -39 2167 104 0 0 chr10 28673174 28673461 -111643304 + AluSg SINE Alu 13 299 -11 212 319 163 28 chr10 28673461 28673507 -111643258 + MIR SINE MIR 223 261 -1 196 135 19 19 chr10 28673599 28673651 -111643114 + (TA)n Simple_repeat Simple_repeat 1 52 0 2228 96 3 0 chr10 28673688 28673991 -111642774 - AluY SINE Alu -7 304 1 2525 69 0 0 chr10 28674264 28674570 -111642195 + AluSq SINE Alu 1 306 -7 2073 140 0 3 chr10 28674694 28675001 -111641764 - AluSg SINE Alu 0 310 5 2124 129 0 0 chr10 28675355 28675650 -111641115 + AluSx SINE Alu 5 299 -13 1863 168 0 10 chr10 28675660 28675951 -111640814 + AluSx SINE Alu 1 288 -24 21 0 0 0 chr10 28675951 28675972 -111640793 + AT_rich Low_complexity Low_complexity 1 21 0 745 138 16 0 chr10 28676196 28676319 -111640446 + FLAM_C SINE Alu 1 125 -8 1662 196 66 0 chr10 28676319 28676712 -111640053 - Tigger6a DNA MER2_type -625 458 40 886 176 74 0 chr10 28677097 28677273 -111639492 + MER74A LTR ERVL 1 189 -369 1217 236 20 10 chr10 28677312 28677685 -111639080 + MER74A LTR ERVL 179 611 -11 378 274 59 87 chr10 28677702 28677921 -111638844 - L1M4 LINE L1 -2090 4056 3844 3671 210 38 10 chr10 28678288 28679792 -111636973 + L1MC1 LINE L1 4284 5825 -519 419 157 0 36 chr10 28679792 28679875 -111636890 + AluS SINE Alu 225 304 -5 335 171 0 61 chr10 28679906 28679988 -111636777 + MSTB2 LTR MaLR 1 77 -351 828 220 34 34 chr10 28680008 28680272 -111636493 + MSTB2 LTR MaLR 184 447 -10 2253 180 31 4 chr10 28680272 28680750 -111636015 + L1MC1 LINE L1 5843 6333 0 405 294 107 18 chr10 28680753 28681313 -111635452 + L1MEc LINE L1 955 1582 -4728 369 0 0 0 chr10 28681342 28681383 -111635382 + (TG)n Simple_repeat Simple_repeat 2 42 0 1937 146 10 10 chr10 28681673 28681982 -111634783 + AluJo SINE Alu 1 309 -3 657 310 139 24 chr10 28681982 28682450 -111634315 + L1MEc LINE L1 2135 2656 -3473 589 97 0 21 chr10 28683049 28683142 -111633623 - MER65B LTR ERV1 -440 91 1 1377 126 18 22 chr10 28683229 28683451 -111633314 + L1PA10 LINE L1 5948 6168 0 626 166 221 44 chr10 28683676 28683779 -111632986 + MER30 DNA MER1_type 1 84 -146 1911 147 3 3 chr10 28683779 28684064 -111632701 - AluSx SINE Alu -23 289 5 626 166 221 44 chr10 28684064 28684141 -111632624 + MER30 DNA MER1_type 84 213 -17 26 64 0 0 chr10 28685110 28685157 -111631608 + AT_rich Low_complexity Low_complexity 1 47 0 770 106 9 0 chr10 28685158 28685271 -111631494 - AluJb SINE Alu -30 282 169 2208 93 0 0 chr10 28685435 28685744 -111631021 - AluSg SINE Alu 0 309 1 1654 166 35 0 chr10 28685744 28686032 -111630733 - AluJb SINE Alu -11 301 3 229 185 123 25 chr10 28687112 28687193 -111629572 + L1MC4 LINE L1 6959 7047 -995 1981 138 3 7 chr10 28687194 28687499 -111629266 + AluSx SINE Alu 1 304 -8 257 183 122 0 chr10 28687637 28687768 -111628997 + L1MC4 LINE L1 7137 7352 -690 2046 131 7 0 chr10 28687773 28688064 -111628701 - AluSq SINE Alu -20 293 1 1102 98 0 0 chr10 28688064 28688197 -111628568 - AluSg1 SINE Alu -176 133 1 257 213 17 148 chr10 28688199 28688429 -111628336 - L1MC5 LINE L1 -380 7581 7382 853 126 132 33 chr10 28688438 28688471 -111628294 + MSTB LTR MaLR 1 29 -397 1725 145 66 38 chr10 28688471 28688836 -111627929 + THE1C LTR MaLR 1 375 0 853 126 132 33 chr10 28688836 28688984 -111627781 + MSTB LTR MaLR 29 200 -226 5616 42 1 0 chr10 28688984 28690148 -111626617 - L1PA5 LINE L1 -202 5952 4788 1424 72 0 0 chr10 28690148 28690328 -111626437 + L1PA5 LINE L1 5966 6146 -8 533 15 15 0 chr10 28690328 28690394 -111626371 + (TA)n Simple_repeat Simple_repeat 2 68 0 1766 171 0 3 chr10 28691430 28691722 -111625043 + AluJb SINE Alu 1 291 -21 213 366 143 17 chr10 28692015 28692190 -111624575 - L2 LINE L2 -4 3268 3072 * 217 306 53 77 chr10 28692158 28692481 -111624284 - L2 LINE L2 -1428 1886 1572 499 174 33 16 chr10 28692746 28692867 -111623898 + MSTA LTR MaLR 185 307 -121 3262 208 46 28 chr10 28693030 28694574 -111622191 + L1MC2 LINE L1 4252 5824 -520 1588 206 10 0 chr10 28694574 28694870 -111621895 + AluSx SINE Alu 1 299 -13 3262 208 46 28 chr10 28694870 28694895 -111621870 + L1MC2 LINE L1 5824 5847 -497 497 151 157 60 chr10 28694906 28695072 -111621693 + MSTC LTR MaLR 1 182 -246 228 143 20 0 chr10 28695776 28695825 -111620940 + MIR SINE MIR 164 213 -49 215 172 125 62 chr10 28695956 28695981 -111620784 + MIR SINE MIR 85 107 -101 5659 107 8 3 chr10 28695981 28696092 -111620673 - L1PA11 LINE L1 -2 6172 6063 215 77 0 26 chr10 28696092 28696131 -111620634 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 1899 126 0 34 chr10 28696131 28696424 -111620341 - AluSx SINE Alu -29 283 1 5659 107 8 3 chr10 28696424 28697438 -111619327 - L1PA11 LINE L1 -110 6064 5037 215 172 125 62 chr10 28697438 28697476 -111619289 + MIR SINE MIR 107 152 -56 236 333 105 43 chr10 28697612 28697822 -111618943 + L2 LINE L2 2811 3033 -239 1834 166 3 10 chr10 28698248 28698550 -111618215 + AluJb SINE Alu 1 300 -12 253 246 0 0 chr10 28698794 28698859 -111617906 + AluJ/FLAM SINE Alu 1 65 -237 1749 144 7 18 chr10 28698859 28699137 -111617628 + AluJo SINE Alu 36 310 -2 24 0 0 0 chr10 28699258 28699282 -111617483 + AT_rich Low_complexity Low_complexity 1 24 0 2494 86 0 0 chr10 28699514 28699817 -111616948 - AluSx SINE Alu -9 303 1 3806 193 37 19 chr10 28699988 28701285 -111615480 + Charlie1a DNA MER1_type 14 1389 -66 2371 113 0 0 chr10 28701286 28701596 -111615169 + AluSg SINE Alu 1 310 0 555 324 221 25 chr10 28701626 28702105 -111614660 - L2 LINE L2 -923 2391 2007 1634 146 54 37 chr10 28702105 28702399 -111614366 - AluJo SINE Alu -13 299 1 555 324 221 25 chr10 28702399 28702920 -111613845 - L2 LINE L2 -1307 2007 1195 544 157 17 17 chr10 28702940 28703055 -111613710 + FLAM_A SINE Alu 20 134 -8 2287 107 3 0 chr10 28703106 28703405 -111613360 + AluSp SINE Alu 1 300 -13 1955 154 0 7 chr10 28703810 28704109 -111612656 + AluSx SINE Alu 1 297 -15 379 245 52 43 chr10 28704113 28704365 -111612400 + L1 LINE L1 3084 3332 -2814 2184 112 0 7 chr10 28704365 28704668 -111612097 + AluSx SINE Alu 1 301 -11 379 245 52 43 chr10 28704668 28705125 -111611640 + L1 LINE L1 3332 3975 -2171 * 1753 218 65 28 chr10 28705124 28705660 -111611105 + L1ME1 LINE L1 5549 6104 -62 700 115 26 0 chr10 28705716 28705829 -111610936 + L1MB4 LINE L1 6065 6180 0 227 323 111 20 chr10 28706836 28706935 -111609830 + MIR3 SINE MIR 78 185 -23 1115 260 80 25 chr10 28706945 28707532 -111609233 + L1MC4a LINE L1 5317 5821 -341 2059 126 19 19 chr10 28707719 28708091 -111608674 - Tigger1 DNA MER2_type -97 2321 1950 699 203 0 23 chr10 28708093 28708221 -111608544 + FLAM_A SINE Alu 2 126 -16 2239 118 0 0 chr10 28708229 28708534 -111608231 + AluSq SINE Alu 1 305 -8 11275 117 41 20 chr10 28708541 28709761 -111607004 - Tigger1 DNA MER2_type -462 1956 763 2320 99 0 3 chr10 28709761 28710063 -111606702 - AluSg SINE Alu -9 301 1 2175 117 0 7 chr10 28710073 28710373 -111606392 - AluY SINE Alu -13 298 1 11275 117 41 20 chr10 28710373 28710433 -111606332 - Tigger1 DNA MER2_type -1663 755 698 2191 120 0 7 chr10 28710433 28710742 -111606023 - AluSg SINE Alu -3 307 1 11275 117 41 20 chr10 28710742 28711365 -111605400 - Tigger1 DNA MER2_type -1720 698 1 378 301 92 85 chr10 28711367 28711794 -111604971 + L1MC4a LINE L1 6145 6578 -1230 2551 47 0 0 chr10 28711794 28712090 -111604675 + AluY SINE Alu 1 296 -15 378 301 92 85 chr10 28712090 28712203 -111604562 + L1MC4a LINE L1 6578 6689 -1119 1089 106 61 0 chr10 28712250 28712448 -111604317 + L1MA8 LINE L1 6072 6281 -10 1887 203 81 31 chr10 28712710 28713189 -111603576 - L1ME1 LINE L1 -24 6142 5560 1809 169 7 16 chr10 28713189 28713496 -111603269 + AluJb SINE Alu 1 304 -8 1887 203 81 31 chr10 28713496 28713750 -111603015 - L1ME1 LINE L1 -606 5560 5320 825 148 0 15 chr10 28713750 28713885 -111602880 - FRAM SINE Alu -18 158 26 2127 125 0 0 chr10 28714110 28714406 -111602359 + AluSx SINE Alu 1 296 -16 380 274 31 75 chr10 28714437 28714692 -111602073 - L1MC4 LINE L1 -366 7676 7433 1014 286 18 12 chr10 28714755 28715098 -111601667 - HsTC2a DNA Tc2 -399 345 1 2251 84 0 7 chr10 28715150 28715458 -111601307 + AluY SINE Alu 1 306 0 1045 134 0 7 chr10 28716088 28716237 -111600528 + AluJb SINE Alu 1 148 -164 918 46 0 0 chr10 28716450 28716558 -111600207 + AluY SINE Alu 194 301 -10 21 0 0 0 chr10 28716604 28716625 -111600140 + AT_rich Low_complexity Low_complexity 1 21 0 2268 77 3 39 chr10 28716833 28717145 -111599620 - AluY SINE Alu -10 301 1 264 122 0 0 chr10 28717749 28717790 -111598975 + (GAAAA)n Simple_repeat Simple_repeat 3 43 0 1151 149 107 9 chr10 28718261 28718476 -111598289 + MER46A DNA MER2_type 1 236 0 443 296 142 21 chr10 28718682 28718915 -111597850 + MIR SINE MIR 1 261 -1 2477 92 0 0 chr10 28718992 28719298 -111597467 + AluSx SINE Alu 1 306 -6 1910 140 49 0 chr10 28719308 28719594 -111597171 + AluSx SINE Alu 1 300 -12 239 391 0 9 chr10 28719622 28719732 -111597033 + MIR SINE MIR 28 136 -126 261 0 0 0 chr10 28719737 28719766 -111596999 + (A)n Simple_repeat Simple_repeat 1 29 0 23 0 0 0 chr10 28720020 28720043 -111596722 + AT_rich Low_complexity Low_complexity 1 23 0 2390 102 0 3 chr10 28720341 28720654 -111596111 + AluSx SINE Alu 1 312 0 1851 164 0 10 chr10 28720662 28720966 -111595799 + AluJb SINE Alu 1 301 -11 988 136 13 13 chr10 28721026 28721181 -111595584 + AluJb SINE Alu 157 311 -1 285 29 0 0 chr10 28721833 28721867 -111594898 + (A)n Simple_repeat Simple_repeat 1 34 0 180 0 0 0 chr10 28723469 28723489 -111593276 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 216 143 0 0 chr10 28723903 28723945 -111592820 + (TTGGGG)n Simple_repeat Simple_repeat 3 44 0 314 279 63 27 chr10 28724819 28724930 -111591835 - L2 LINE L2 0 3272 3158 1424 189 14 11 chr10 28725067 28725347 -111591418 - AluJo SINE Alu -27 285 5 247 268 0 62 chr10 28726102 28726199 -111590566 - MIR SINE MIR -87 175 85 2119 159 40 38 chr10 28726232 28726429 -111590336 + MSTA LTR MaLR 1 196 -232 1431 166 0 111 chr10 28726429 28726761 -111590004 + AluJb SINE Alu 2 296 -6 2119 159 40 38 chr10 28726761 28726990 -111589775 + MSTA LTR MaLR 196 428 0 696 189 6 11 chr10 28727089 28727269 -111589496 + GA-rich Low_complexity Low_complexity 2 180 0 468 137 24 65 chr10 28727273 28727397 -111589368 + L1M4 LINE L1 5188 5306 -840 687 152 71 0 chr10 28727422 28727534 -111589231 + AluJb SINE Alu 2 121 -191 1005 225 21 55 chr10 28727550 28727565 -111589200 + L1ME1 LINE L1 5877 5891 -275 1712 146 78 20 chr10 28727565 28727860 -111588905 + AluSx SINE Alu 1 312 0 2225 113 3 7 chr10 28727861 28728170 -111588595 + AluSp SINE Alu 6 313 0 1005 225 21 55 chr10 28728170 28728407 -111588358 + L1ME1 LINE L1 5891 6122 -44 2281 108 0 0 chr10 28728407 28728704 -111588061 + AluSx SINE Alu 2 298 -14 1005 225 21 55 chr10 28728704 28728737 -111588028 + L1ME1 LINE L1 6122 6155 -11 625 206 63 0 chr10 28728758 28728884 -111587881 + FRAM SINE Alu 29 162 -14 2482 87 3 0 chr10 28729046 28729356 -111587409 + AluSq SINE Alu 1 311 -2 1699 169 140 3 chr10 28730089 28730432 -111586333 - MLT1B LTR MaLR 0 390 1 2240 125 0 3 chr10 28730493 28730806 -111585959 - AluSx SINE Alu 0 312 1 2260 119 0 3 chr10 28730813 28731124 -111585641 - AluSg SINE Alu 0 310 1 272 203 17 17 chr10 28731376 28731435 -111585330 + LTR33A LTR ERVL 457 515 -8 498 174 41 0 chr10 28731468 28731566 -111585199 + U13 snRNA snRNA 1 102 -2 751 184 14 0 chr10 28731590 28731731 -111585034 + FAM SINE Alu 23 165 -20 23 0 0 0 chr10 28731828 28731851 -111584914 + AT_rich Low_complexity Low_complexity 1 23 0 2170 115 3 0 chr10 28732151 28732455 -111584310 - AluSg SINE Alu -4 306 2 392 167 0 0 chr10 28732472 28732544 -111584221 + CT-rich Low_complexity Low_complexity 3 74 0 216 0 0 0 chr10 28733346 28733370 -111583395 + (CA)n Simple_repeat Simple_repeat 2 25 0 231 313 31 31 chr10 28733370 28733524 -111583241 + L1ME4a LINE L1 5631 5787 -334 2352 92 3 3 chr10 28733524 28733829 -111582936 + AluSx SINE Alu 1 305 -7 231 313 31 31 chr10 28733829 28733866 -111582899 + L1ME4a LINE L1 5786 5822 -299 1319 157 22 54 chr10 28733868 28734125 -111582640 + L1M1 LINE L1 5101 5354 -828 423 0 0 0 chr10 28734125 28734172 -111582593 + (CA)n Simple_repeat Simple_repeat 2 48 0 1319 157 22 54 chr10 28734172 28734256 -111582509 + L1M1 LINE L1 5354 5439 -743 1160 73 0 0 chr10 28734261 28734397 -111582368 + AluSq/x SINE Alu 1 136 -176 2029 125 48 0 chr10 28734397 28734692 -111582073 + AluSx SINE Alu 1 309 -3 1076 144 0 6 chr10 28734693 28734867 -111581898 + L1M1 LINE L1 5432 5604 -696 1845 183 0 3 chr10 28734869 28735170 -111581595 + AluJo SINE Alu 1 300 -12 189 0 0 0 chr10 28735193 28735214 -111581551 + (CA)n Simple_repeat Simple_repeat 2 22 0 239 193 72 24 chr10 28735220 28735303 -111581462 + L1ME4a LINE L1 5974 6060 -61 1732 134 94 11 chr10 28735355 28735630 -111581135 - AluJo SINE Alu -14 298 1 2384 106 0 0 chr10 28735679 28735990 -111580775 - AluSx SINE Alu -1 311 1 532 212 94 41 chr10 28736277 28736447 -111580318 + MLT1L LTR MaLR 433 611 -4 1455 221 27 22 chr10 28736705 28737076 -111579689 - MLT1B LTR MaLR -6 384 12 1916 164 3 13 chr10 28737181 28737493 -111579272 - AluSx SINE Alu -3 309 1 2203 113 3 0 chr10 28737607 28737899 -111578866 - AluSg SINE Alu -17 293 1 308 359 36 10 chr10 28738106 28738298 -111578467 - L2 LINE L2 -505 2809 2613 258 268 170 0 chr10 28738365 28738477 -111578288 - MIR SINE MIR -130 132 2 1979 160 3 0 chr10 28738792 28739098 -111577667 + AluJb SINE Alu 1 307 -5 1283 185 0 115 chr10 28739247 28739587 -111577178 + AluJo SINE Alu 2 302 0 2019 165 131 0 chr10 28739661 28740043 -111576722 + MSTB1 LTR MaLR 1 432 0 28 0 0 0 chr10 28740332 28740360 -111576405 + AT_rich Low_complexity Low_complexity 1 28 0 921 221 46 14 chr10 28740545 28740762 -111576003 + MER58A DNA MER1_type 1 224 0 241 224 0 0 chr10 28740771 28740820 -111575945 + MER5B DNA MER1_type 2 50 -128 4610 184 26 38 chr10 28740858 28742067 -111574698 - L1MA9 LINE L1 -30 6282 5089 267 229 0 144 chr10 28742070 28742188 -111574577 - MER5B DNA MER1_type -11 167 67 1558 96 10 0 chr10 28742342 28742541 -111574224 + AluSc SINE Alu 1 201 -108 1772 110 8 8 chr10 28742647 28742901 -111573864 + AluSx SINE Alu 56 309 -3 207 0 0 0 chr10 28742913 28742936 -111573829 + (TA)n Simple_repeat Simple_repeat 2 24 0 2201 118 0 0 chr10 28744781 28745069 -111571696 + AluSq SINE Alu 1 288 -25 1136 136 0 11 chr10 28745281 28745457 -111571308 + AluSq SINE Alu 1 174 -139 627 214 8 8 chr10 28745768 28745899 -111570866 - FLAM_A SINE Alu -1 141 11 1151 166 42 0 chr10 28745922 28746143 -111570622 - AluJo SINE Alu 0 309 81 1532 253 85 40 chr10 28746143 28746661 -111570104 - L1M4 LINE L1 -5988 554 14 1778 187 0 0 chr10 28746685 28746984 -111569781 - AluJo SINE Alu -8 304 6 2088 109 3 0 chr10 28747140 28747477 -111569288 + AluSx SINE Alu 1 338 0 815 164 8 0 chr10 28747501 28747629 -111569136 + FLAM_C SINE Alu 1 129 -4 1645 106 0 5 chr10 28747670 28747887 -111568878 - AluSg/x SINE Alu -23 289 74 1575 200 0 7 chr10 28748050 28748345 -111568420 - AluJo SINE Alu -16 296 4 207 0 0 0 chr10 28748367 28748390 -111568375 + (TC)n Simple_repeat Simple_repeat 2 24 0 2049 79 41 38 chr10 28748390 28748680 -111568085 - AluY SINE Alu -13 298 8 24 0 0 0 chr10 28749019 28749043 -111567722 + AT_rich Low_complexity Low_complexity 1 24 0 1950 126 4 0 chr10 28749389 28749703 -111567062 + AluSc SINE Alu 1 315 0 1629 179 0 10 chr10 28750195 28750491 -111566274 + AluSx SINE Alu 1 293 -19 782 198 32 0 chr10 28750499 28750656 -111566109 + L1PB1 LINE L1 5988 6149 -2 1108 152 0 0 chr10 28751135 28751300 -111565465 + AluJb SINE Alu 144 308 -4 3648 202 34 37 chr10 28751300 28752241 -111564524 + L1M4 LINE L1 4325 5262 -884 945 154 0 19 chr10 28752241 28752255 -111564510 + AluSg/x SINE Alu 120 133 -177 2100 128 3 3 chr10 28752255 28752560 -111564205 + AluSx SINE Alu 1 305 -7 945 154 0 19 chr10 28752560 28752701 -111564064 + AluSg/x SINE Alu 133 272 -38 1075 182 28 0 chr10 28752846 28752864 -111563901 + L1M4 LINE L1 5278 5294 -890 2304 106 0 0 chr10 28752864 28753175 -111563590 + AluY SINE Alu 1 311 0 1075 182 28 0 chr10 28753175 28753395 -111563370 + L1M4 LINE L1 5294 5517 -667 512 215 42 103 chr10 28753414 28753585 -111563180 + MER3 DNA MER1_type 4 161 -48 2294 107 13 0 chr10 28753585 28753893 -111562872 + AluSx SINE Alu 1 312 0 512 215 42 103 chr10 28753893 28753935 -111562830 + MER3 DNA MER1_type 161 204 -5 1964 137 0 51 chr10 28754310 28754437 -111562328 + AluJo SINE Alu 1 133 -179 2301 112 0 0 chr10 28754437 28754733 -111562032 - AluSx SINE Alu -16 296 1 1964 137 0 51 chr10 28754733 28754919 -111561846 + AluJo SINE Alu 133 298 -14 2107 120 30 0 chr10 28755472 28755773 -111560992 - AluSx SINE Alu -2 310 1 180 77 0 0 chr10 28756104 28756130 -111560635 + (A)n Simple_repeat Simple_repeat 1 26 0 416 331 102 0 chr10 28756213 28756370 -111560395 - MER91A DNA MER1_type -23 173 1 1446 185 56 14 chr10 28756571 28756858 -111559907 + AluJo SINE Alu 1 299 -13 308 89 0 0 chr10 28756858 28756903 -111559862 + (GGA)n Simple_repeat Simple_repeat 1 45 0 345 157 13 50 chr10 28756963 28757122 -111559643 + T-rich Low_complexity Low_complexity 6 158 0 24 91 0 0 chr10 28757133 28757199 -111559566 + AT_rich Low_complexity Low_complexity 1 66 0 34 98 0 0 chr10 28757222 28757314 -111559451 + AT_rich Low_complexity Low_complexity 1 92 0 1092 198 39 4 chr10 28757607 28757864 -111558901 + L1MC3 LINE L1 7513 7778 -7 21 0 0 0 chr10 28757875 28757896 -111558869 + AT_rich Low_complexity Low_complexity 1 21 0 216 162 0 0 chr10 28758541 28758578 -111558187 + GA-rich Low_complexity Low_complexity 2 38 0 2583 53 3 0 chr10 28759381 28759685 -111557080 - AluY SINE Alu -6 305 1 1612 175 54 0 chr10 28760471 28760751 -111556014 + AluJo SINE Alu 1 295 -17 1108 302 40 30 chr10 28761675 28762172 -111554593 - MLT1J LTR MaLR -9 502 1 2433 88 0 3 chr10 28762376 28762684 -111554081 + AluSq SINE Alu 1 307 -6 209 213 0 0 chr10 28762992 28763039 -111553726 + (TA)n Simple_repeat Simple_repeat 1 47 0 212 264 34 20 chr10 28763167 28763315 -111553450 + (TA)n Simple_repeat Simple_repeat 1 150 0 384 190 13 0 chr10 28763442 28763521 -111553244 + LTR24C LTR ERV1 556 635 0 24 0 0 0 chr10 28763576 28763600 -111553165 + AT_rich Low_complexity Low_complexity 1 24 0 2114 96 13 35 chr10 28763617 28763931 -111552834 + AluSc SINE Alu 3 309 0 2407 57 7 17 chr10 28765744 28766045 -111550720 + AluY SINE Alu 1 298 -13 2237 109 10 10 chr10 28766115 28766427 -111550338 + AluSx SINE Alu 1 312 0 203 191 15 0 chr10 28766554 28766622 -111550143 + (TA)n Simple_repeat Simple_repeat 2 70 0 2364 186 81 14 chr10 28766653 28767207 -111549558 - LTR49 LTR ERV1 0 595 5 360 0 0 0 chr10 28767207 28767247 -111549518 + (TG)n Simple_repeat Simple_repeat 2 41 0 195 162 0 0 chr10 28768130 28768167 -111548598 + (TG)n Simple_repeat Simple_repeat 2 38 0 282 148 0 0 chr10 28768202 28768256 -111548509 + (TG)n Simple_repeat Simple_repeat 1 54 0 22 0 0 0 chr10 28768335 28768357 -111548408 + AT_rich Low_complexity Low_complexity 1 22 0 2748 62 0 0 chr10 28768616 28768957 -111547808 + L1PA7 LINE L1 5801 6141 -13 1499 205 72 11 chr10 28769403 28769764 -111547001 + LTR49 LTR ERV1 211 593 -2 1874 180 43 7 chr10 28769768 28770178 -111546587 + LTR49-int LTR ERV1 1 1327 -4619 2665 180 15 27 chr10 28770213 28770479 -111546286 + LTR49-int LTR ERV1 361 629 -5317 8349 53 2 0 chr10 28770479 28771443 -111545322 + LTR5 LTR ERVK 1 966 -3 2665 180 15 27 chr10 28771443 28771704 -111545061 + LTR49-int LTR ERV1 629 1476 -4470 2645 190 35 8 chr10 28771744 28772254 -111544511 + LTR49-int LTR ERV1 840 1363 -4968 971 175 52 10 chr10 28772256 28772450 -111544315 - L1PA15 LINE L1 -5 6160 5959 1182 153 37 23 chr10 28772589 28772786 -111543979 + LTR49-int LTR ERV1 1372 1574 -4757 5404 108 26 2 chr10 28772786 28773593 -111543172 + L1MA1 LINE L1 5477 6302 0 1182 153 37 23 chr10 28773593 28773611 -111543154 + LTR49-int LTR ERV1 1574 1590 -4741 2043 128 3 3 chr10 28773897 28774187 -111542578 - AluSg SINE Alu -20 290 1 302 26 0 0 chr10 28775747 28775785 -111540980 - L1PA12 LINE L1 -357 5817 5780 2316 99 0 14 chr10 28775785 28776122 -111540643 + L1PA12 LINE L1 5830 6168 0 2004 71 26 11 chr10 28776274 28776543 -111540222 + AluY SINE Alu 39 311 0 847 223 49 111 chr10 28776866 28777252 -111539513 - MLT1A2 LTR MaLR -12 362 1 301 270 45 9 chr10 28777253 28777364 -111539401 + L1M4 LINE L1 3540 3654 -2492 359 271 32 72 chr10 28777417 28777668 -111539097 + L1M4 LINE L1 4644 4884 -1262 568 298 73 29 chr10 28777686 28778026 -111538739 - L2 LINE L2 -211 3102 2748 1445 104 0 42 chr10 28778226 28778400 -111538365 - L1P LINE L1 -959 5187 5025 1837 93 93 0 chr10 28778400 28778690 -111538075 - AluSg SINE Alu 0 314 1 1445 104 0 42 chr10 28778690 28778774 -111537991 - L1P LINE L1 -1121 5025 4939 6260 84 12 22 chr10 28778774 28779374 -111537391 + L1PA8 LINE L1 5184 5773 -399 2354 91 0 10 chr10 28779374 28779681 -111537084 + AluY SINE Alu 1 304 -7 6260 84 12 22 chr10 28779681 28780069 -111536696 + L1PA8 LINE L1 5773 6163 -9 32 26 0 0 chr10 28780076 28780115 -111536650 + AT_rich Low_complexity Low_complexity 1 39 0 1140 183 64 3 chr10 28781417 28781712 -111535053 + MER33 DNA MER1_type 6 318 -6 1285 149 0 0 chr10 28782194 28782382 -111534383 - AluSx SINE Alu -94 218 31 5869 136 93 23 chr10 28782382 28784137 -111532628 + pTR5 LTR ERV1 282 2295 -143 225 114 0 0 chr10 28784137 28784172 -111532593 - AluSx SINE Alu -266 35 1 2286 126 0 0 chr10 28784730 28785040 -111531725 + AluSg SINE Alu 1 310 0 243 250 231 9 chr10 28785410 28785518 -111531247 - MIR SINE MIR -117 145 14 22 35 0 0 chr10 28786568 28786597 -111530168 + AT_rich Low_complexity Low_complexity 1 29 0 2483 75 0 3 chr10 28787601 28787908 -111528857 - AluY SINE Alu -5 306 1 341 161 145 65 chr10 28788091 28788215 -111528550 + MIR SINE MIR 95 228 -34 1075 226 73 35 chr10 28788221 28788535 -111528230 + MER31-int LTR ERV1 638 963 -3973 229 156 44 0 chr10 28788598 28788643 -111528122 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 1448 159 51 14 chr10 28788856 28789152 -111527613 + MER67A LTR ERV1 156 462 -81 22 35 0 0 chr10 28789971 28790000 -111526765 + AT_rich Low_complexity Low_complexity 1 29 0 1666 97 0 0 chr10 28790412 28790628 -111526137 + AluSc SINE Alu 74 289 -20 2412 58 0 16 chr10 28790628 28790937 -111525828 + AluY SINE Alu 1 304 -7 2355 77 3 7 chr10 28791093 28791393 -111525372 - AluY SINE Alu -11 300 2 2133 114 0 7 chr10 28791627 28791935 -111524830 + AluSx SINE Alu 1 306 -6 22 35 0 0 chr10 28792456 28792485 -111524280 + AT_rich Low_complexity Low_complexity 1 29 0 2196 89 0 67 chr10 28792610 28792937 -111523828 + AluY SINE Alu 1 305 -6 2316 97 3 13 chr10 28793081 28793390 -111523375 - AluSc SINE Alu -3 306 1 2258 91 0 7 chr10 28793393 28793691 -111523074 - AluSg1 SINE Alu -13 296 1 23 0 0 0 chr10 28794176 28794199 -111522566 + AT_rich Low_complexity Low_complexity 1 23 0 2247 93 7 32 chr10 28794374 28794684 -111522081 - AluSp SINE Alu -11 302 1 1929 184 3 7 chr10 28794799 28795109 -111521656 - AluJb SINE Alu -3 309 1 2350 105 0 3 chr10 28795320 28795626 -111521139 - AluSx SINE Alu -7 305 1 1940 154 11 0 chr10 28795629 28795915 -111520850 - AluSx SINE Alu -23 289 1 2108 127 41 120 chr10 28796351 28796816 -111519949 - MSTA LTR MaLR 0 428 1 2040 93 42 39 chr10 28796897 28797207 -111519558 + AluSx SINE Alu 1 311 -1 255 313 17 73 chr10 28798579 28798758 -111518007 - L2 LINE L2 -156 3116 2948 775 264 77 110 chr10 28798895 28799612 -111517153 - L2 LINE L2 -513 2801 2109 6360 68 2 5 chr10 28800396 28801275 -111515490 - L1PA8A LINE L1 -1 6130 5254 223 154 15 31 chr10 28801409 28801474 -111515291 + (CAAA)n Simple_repeat Simple_repeat 1 64 0 779 134 10 139 chr10 28801523 28801724 -111515041 - MER2 DNA MER2_type -170 175 1 233 239 60 0 chr10 28801822 28801889 -111514876 + MER5A DNA MER1_type 31 101 -88 776 245 5 22 chr10 28802214 28802398 -111514367 + MIR SINE MIR 58 238 -24 261 333 30 85 chr10 28802479 28802552 -111514213 + L2 LINE L2 2842 2918 -354 1759 142 0 111 chr10 28802552 28802747 -111514018 - AluJo SINE Alu -6 306 164 2132 92 18 0 chr10 28802747 28803028 -111513737 - AluSq SINE Alu -27 286 1 1759 142 0 111 chr10 28803028 28803176 -111513589 - AluJo SINE Alu -148 164 1 261 333 30 85 chr10 28803176 28803372 -111513393 + L2 LINE L2 2918 3096 -176 370 109 0 0 chr10 28803515 28803570 -111513195 - Alu SINE Alu -244 55 1 180 0 26 79 chr10 28803782 28803820 -111512945 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 281 305 49 59 chr10 28804800 28805003 -111511762 + LTR40a LTR ERVL 209 409 -110 263 310 0 0 chr10 28805001 28805059 -111511706 - LTR40a LTR ERVL -222 297 240 * 310 234 143 0 chr10 28805139 28805216 -111511549 - LTR40b LTR ERVL -293 169 82 2397 91 0 0 chr10 28805224 28805522 -111511243 + AluSx SINE Alu 1 298 -14 1875 165 0 10 chr10 28805532 28805823 -111510942 + AluSx SINE Alu 1 288 -24 21 0 0 0 chr10 28805823 28805844 -111510921 + AT_rich Low_complexity Low_complexity 1 21 0 970 67 8 0 chr10 28806077 28806196 -111510569 + AluY SINE Alu 9 128 -183 1581 198 67 3 chr10 28806196 28806585 -111510180 - Tigger6a DNA MER2_type -630 453 40 856 188 74 0 chr10 28806970 28807146 -111509619 + MER74A LTR ERVL 1 189 -369 1277 226 13 7 chr10 28807185 28807486 -111509279 + MER74A LTR ERVL 179 481 -77 205 315 0 0 chr10 28807627 28807681 -111509084 - MIR SINE MIR -196 66 13 398 254 51 8 chr10 28807703 28807821 -111508944 - MIR SINE MIR -4 258 136 783 181 8 0 chr10 28807826 28807959 -111508806 - AluJo SINE Alu -178 134 1 431 272 14 48 chr10 28807964 28808111 -111508654 - MIR SINE MIR -116 146 5 23 54 0 0 chr10 28808165 28808202 -111508563 + AT_rich Low_complexity Low_complexity 1 37 0 2265 105 0 0 chr10 28808291 28808585 -111508180 - AluSc SINE Alu -15 294 1 1177 242 102 44 chr10 28808901 28809360 -111507405 - MLT1H1 LTR MaLR -22 533 48 895 204 66 15 chr10 28809361 28809557 -111507208 - AluJo SINE Alu -18 294 89 317 217 0 0 chr10 28809560 28809620 -111507145 - MLT1H1 LTR MaLR -495 60 1 715 210 14 0 chr10 28809743 28809886 -111506879 + AluSq/x SINE Alu 1 145 -167 347 278 41 0 chr10 28810149 28810246 -111506519 + L3 LINE CR1 1460 1560 -17 1305 132 0 0 chr10 28810649 28810831 -111505934 - AluJ SINE Alu -2 310 129 1699 179 0 13 chr10 28810839 28811140 -111505625 - AluJo SINE Alu -15 297 1 731 169 0 8 chr10 28811189 28811307 -111505458 - AluJ SINE Alu -192 120 4 1372 215 129 22 chr10 28811895 28812383 -111504382 - L1ME3A LINE L1 0 6170 5631 284 200 56 11 chr10 28813251 28813341 -111503424 - L1MC4 LINE L1 -6 8036 7943 1441 175 57 0 chr10 28813356 28813602 -111503163 - AluJb SINE Alu -52 260 1 30 27 0 0 chr10 28813641 28813678 -111503087 + AT_rich Low_complexity Low_complexity 1 37 0 380 209 173 0 chr10 28813678 28813788 -111502977 - L1MC4 LINE L1 -147 7895 7767 617 151 0 0 chr10 28813788 28813881 -111502884 + AluSx SINE Alu 3 95 -217 1642 99 14 5 chr10 28813898 28814121 -111502644 + AluSx SINE Alu 72 296 -14 502 188 34 170 chr10 28814129 28814453 -111502312 - L1MC4 LINE L1 -273 7769 7490 * 583 213 71 36 chr10 28814452 28814677 -111502088 - L1ME4a LINE L1 -295 5826 5594 361 256 35 81 chr10 28814793 28814965 -111501800 + L1MC4a LINE L1 7294 7457 -351 465 282 91 38 chr10 28815365 28815759 -111501006 - L1MC4 LINE L1 -15 8027 7613 27 29 0 0 chr10 28815967 28816001 -111500764 + AT_rich Low_complexity Low_complexity 1 34 0 866 153 0 0 chr10 28817592 28817723 -111499042 + AluJo SINE Alu 1 131 -181 1984 137 39 0 chr10 28817729 28818014 -111498751 + AluSx SINE Alu 3 298 -14 933 220 23 0 chr10 28818059 28818236 -111498529 + AluJo SINE Alu 118 298 -14 1281 162 165 13 chr10 28818401 28818704 -111498061 + L1MB7 LINE L1 5823 6171 -13 2234 118 0 3 chr10 28819929 28820234 -111496531 - AluSq SINE Alu -7 306 3 1637 179 24 30 chr10 28821173 28821470 -111495295 + AluJo SINE Alu 1 295 -17 537 230 0 0 chr10 28821488 28821588 -111495177 + FRAM SINE Alu 1 100 -76 1007 127 63 39 chr10 28821647 28821852 -111494913 + MER2 DNA MER2_type 1 210 -135 244 282 28 0 chr10 28821880 28821951 -111494814 + MER2 DNA MER2_type 273 345 0 2117 106 0 0 chr10 28822203 28822477 -111494288 - AluSx SINE Alu -38 274 1 815 157 0 15 chr10 28822883 28823017 -111493748 - FLAM_C SINE Alu -1 132 1 216 196 0 0 chr10 28823019 28823065 -111493700 + T-rich Low_complexity Low_complexity 2 47 0 2149 126 10 0 chr10 28823067 28823376 -111493389 - AluSp SINE Alu -1 312 1 1812 148 38 14 chr10 28824148 28824439 -111492326 + AluJb SINE Alu 1 298 -14 1238 122 0 36 chr10 28824489 28824685 -111492080 - AluSg/x SINE Alu -9 303 115 2141 119 3 0 chr10 28824715 28825017 -111491748 - AluSx SINE Alu -9 303 1 893 102 14 54 chr10 28825526 28825673 -111491092 + L1PB3 LINE L1 6011 6151 -3 24 32 0 0 chr10 28825675 28825706 -111491059 + AT_rich Low_complexity Low_complexity 1 31 0 570 113 38 0 chr10 28825795 28825875 -111490890 - AluSg/x SINE Alu -13 296 214 684 175 114 0 chr10 28825927 28826041 -111490724 - FLAM_A SINE Alu -6 127 1 2454 93 0 3 chr10 28826061 28826374 -111490391 - AluSq SINE Alu -1 312 1 2096 145 7 0 chr10 28826513 28826823 -111489942 - AluJb SINE Alu 0 312 1 1140 161 55 5 chr10 28826846 28827045 -111489720 + AluJb SINE Alu 83 291 -21 442 318 112 40 chr10 28827053 28827427 -111489338 - L2 LINE L2 -2659 655 255 1969 116 3 27 chr10 28828274 28828406 -111488359 + AluSx SINE Alu 6 140 -172 2144 116 0 28 chr10 28828406 28828726 -111488039 + AluSx SINE Alu 1 311 -1 1969 116 3 27 chr10 28828726 28828886 -111487879 + AluSx SINE Alu 140 291 -21 417 239 28 0 chr10 28829403 28829512 -111487253 - L1MC4 LINE L1 -5 8037 7926 490 152 168 0 chr10 28829606 28829731 -111487034 - L1ME1 LINE L1 -5 6161 6016 1225 184 88 33 chr10 28829742 28830073 -111486692 - L1ME1 LINE L1 -582 5602 5254 2400 56 10 13 chr10 28830091 28830394 -111486371 - AluY SINE Alu -9 302 1 2431 70 0 16 chr10 28830404 28830718 -111486047 - AluY SINE Alu -2 309 1 438 221 49 8 chr10 28830718 28830899 -111485866 - L1M4 LINE L1 -3931 2755 2525 1788 171 7 0 chr10 28830908 28831237 -111485528 + AluSx SINE Alu 1 331 0 1089 228 134 55 chr10 28831278 28832060 -111484705 - L1M4 LINE L1 -4706 1940 1107 2080 134 3 7 chr10 28832412 28832719 -111484046 - AluSx SINE Alu -6 306 1 591 92 5 87 chr10 28832837 28833033 -111483732 + (TA)n Simple_repeat Simple_repeat 1 180 0 1530 130 130 16 chr10 28833705 28833958 -111482807 - AluSg SINE Alu -15 295 14 306 250 176 27 chr10 28834126 28834355 -111482410 - LTR41 LTR ERVL 0 795 510 2377 88 3 0 chr10 28834958 28835252 -111481513 - AluSg SINE Alu -15 295 1 857 174 12 124 chr10 28835283 28835370 -111481395 - AluJo SINE Alu -92 220 125 2235 118 0 7 chr10 28835370 28835674 -111481091 - AluSx SINE Alu -8 304 3 2195 92 6 47 chr10 28835684 28836001 -111480764 - AluSx SINE Alu -7 305 2 857 174 12 124 chr10 28836001 28836144 -111480621 - AluJo SINE Alu -197 115 6 326 156 32 50 chr10 28836155 28836235 -111480530 + LTR41 LTR ERVL 440 771 0 21 0 0 0 chr10 28836316 28836337 -111480428 + AT_rich Low_complexity Low_complexity 1 21 0 886 149 0 0 chr10 28836339 28836460 -111480305 - FLAM_C SINE Alu -12 121 1 181 299 0 30 chr10 28836617 28836684 -111480081 + L2 LINE L2 3201 3265 -7 2430 56 3 17 chr10 28836952 28837254 -111479511 + AluY SINE Alu 1 298 -13 1595 118 77 37 chr10 28837755 28838027 -111478738 - AluSx SINE Alu -1 311 29 2046 126 7 13 chr10 28838372 28838681 -111478084 + AluJb SINE Alu 1 307 -5 1343 140 212 8 chr10 28840112 28840362 -111476403 + AluJo SINE Alu 2 302 0 2344 110 0 0 chr10 28840501 28840809 -111475956 + AluSq SINE Alu 1 308 -5 2545 37 0 3 chr10 28840943 28841239 -111475526 + AluY SINE Alu 1 295 -16 881 111 8 8 chr10 28841481 28841607 -111475158 + FLAM_C SINE Alu 1 126 -17 200 217 0 0 chr10 28841639 28841685 -111475080 + A-rich Low_complexity Low_complexity 1 46 0 1748 163 3 14 chr10 28841839 28842155 -111474610 + AluSx SINE Alu 1 313 0 1799 102 81 35 chr10 28842314 28842598 -111474167 - AluY SINE Alu -14 297 1 2096 126 0 0 chr10 28842598 28842884 -111473881 - AluSx SINE Alu -18 294 9 2193 123 0 7 chr10 28843000 28843310 -111473455 - AluSx SINE Alu -4 308 1 1949 141 7 7 chr10 28844109 28844406 -111472359 - AluSx SINE Alu -15 297 1 494 222 0 9 chr10 28844653 28844761 -111472004 - MER104 DNA Tc2 -71 109 3 1928 155 7 3 chr10 28844775 28845072 -111471693 - AluJo SINE Alu -14 298 1 679 247 101 31 chr10 28845162 28845389 -111471376 - MIR SINE MIR 0 262 20 2464 95 20 80 chr10 28845503 28845902 -111470863 - THE1C LTR MaLR 0 375 1 2186 107 0 20 chr10 28846691 28846991 -111469774 - AluSx SINE Alu -18 294 1 2199 109 3 3 chr10 28847793 28848086 -111468679 - AluSg SINE Alu -17 293 1 354 306 106 15 chr10 28848426 28848625 -111468140 + MIR SINE MIR 14 230 -32 1749 174 7 0 chr10 28848663 28848978 -111467787 - AluJb SINE Alu 0 317 1 750 124 26 0 chr10 28849374 28849487 -111467278 - AluSx SINE Alu -5 307 192 1097 113 0 0 chr10 28849487 28849628 -111467137 - AluSx SINE Alu -172 141 1 1766 190 7 3 chr10 28849977 28850282 -111466483 - AluJo SINE Alu -6 306 1 792 132 0 0 chr10 28851364 28851470 -111465295 + U6 snRNA snRNA 1 106 -1 1782 157 10 17 chr10 28851706 28851999 -111464766 + AluJo SINE Alu 1 291 -21 281 329 74 7 chr10 28852438 28852587 -111464178 - MIR SINE MIR -47 215 57 2372 107 0 7 chr10 28852720 28853030 -111463735 + AluSg SINE Alu 1 308 -2 21 0 0 0 chr10 28853607 28853628 -111463137 + AT_rich Low_complexity Low_complexity 1 21 0 2381 157 33 28 chr10 28853658 28854086 -111462679 - Tigger2a DNA MER2_type 0 434 5 2549 69 0 0 chr10 28854393 28854696 -111462069 + AluSg SINE Alu 1 303 -7 2183 118 0 13 chr10 28854901 28855206 -111461559 - AluSq SINE Alu -12 301 1 2203 105 6 16 chr10 28855545 28855859 -111460906 - AluSp SINE Alu -2 311 1 709 275 7 0 chr10 28855878 28856027 -111460738 - MER58A DNA MER1_type 0 151 2 873 144 0 8 chr10 28856200 28856350 -111460415 - FLAM_C SINE Alu 0 149 1 193 240 82 111 chr10 28856611 28856782 -111459983 - L2 LINE L2 -787 2527 2362 21 0 0 0 chr10 28857003 28857024 -111459741 + AT_rich Low_complexity Low_complexity 1 21 0 348 321 124 19 chr10 28857044 28857253 -111459512 - MIR SINE MIR -16 246 16 332 116 13 247 chr10 28857652 28857756 -111459009 - L1PB3 LINE L1 -279 5875 5819 2266 89 3 0 chr10 28857756 28858047 -111458718 + AluY SINE Alu 1 292 -19 332 116 13 247 chr10 28858047 28858100 -111458665 - L1PB3 LINE L1 -335 5819 5755 1904 157 0 4 chr10 28859603 28859916 -111456849 - AluSg SINE Alu 0 312 1 2087 130 3 0 chr10 28859918 28860217 -111456548 - AluSx SINE Alu -9 303 4 7152 212 56 25 chr10 28862519 28863229 -111453536 - L1 LINE L1 -2234 3912 3225 2420 96 0 6 chr10 28863229 28863542 -111453223 + AluSq SINE Alu 3 313 0 7152 212 56 25 chr10 28863542 28864945 -111451820 - L1 LINE L1 -2921 3225 1750 5207 161 60 30 chr10 28864973 28865098 -111451667 - L1PBb LINE L1 -4759 1445 1325 1937 125 24 20 chr10 28865098 28865393 -111451372 - AluSx SINE Alu -16 296 1 5207 161 60 30 chr10 28865393 28866670 -111450095 - L1PBb LINE L1 -4879 1325 1 2819 298 46 35 chr10 28866651 28868255 -111448510 - L1PBa LINE L1 -5240 1623 3 * 2578 41 0 29 chr10 28868318 28868632 -111448133 + AluY SINE Alu 1 305 -6 2276 108 0 3 chr10 28868827 28869122 -111447643 + AluSg SINE Alu 1 294 -16 1962 152 17 0 chr10 28869372 28869669 -111447096 - AluSx SINE Alu -10 302 1 1513 194 60 0 chr10 28869669 28869952 -111446813 - AluJo SINE Alu -8 304 5 805 173 0 0 chr10 28870183 28870310 -111446455 + FLAM_C SINE Alu 1 127 -6 2135 125 0 10 chr10 28870569 28870874 -111445891 - AluSg SINE Alu -2 308 7 2043 131 60 35 chr10 28871325 28871691 -111445074 - THE1C LTR MaLR 0 375 1 2340 146 33 5 chr10 28871968 28872359 -111444406 + MSTA LTR MaLR 1 402 -26 284 125 0 0 chr10 28872392 28872432 -111444333 + MSTA LTR MaLR 389 428 0 2266 95 3 0 chr10 28872696 28872981 -111443784 + AluSx SINE Alu 12 297 -15 23 33 0 0 chr10 28873017 28873047 -111443718 + AT_rich Low_complexity Low_complexity 1 30 0 2251 98 13 3 chr10 28873631 28873936 -111442829 + AluSc SINE Alu 1 308 -1 186 71 0 0 chr10 28874038 28874066 -111442699 + (T)n Simple_repeat Simple_repeat 1 28 0 393 263 169 78 chr10 28874439 28874759 -111442006 - L2 LINE L2 -18 3295 2947 244 167 24 0 chr10 28875315 28875357 -111441408 - MER57A LTR ERV1 -66 337 295 2352 103 3 6 chr10 28876172 28876484 -111440281 + AluSx SINE Alu 1 311 -1 2240 107 33 0 chr10 28876734 28877033 -111439732 + AluSx SINE Alu 1 309 -3 483 198 72 54 chr10 28877266 28877409 -111439356 - MER5A DNA MER1_type -40 149 4 1643 137 27 34 chr10 28877940 28878232 -111438533 + AluJb SINE Alu 11 300 -12 2223 101 0 17 chr10 28879576 28879874 -111436891 - AluSx SINE Alu -19 293 1 2025 111 56 0 chr10 28879874 28880161 -111436604 - AluSx SINE Alu -7 305 3 255 268 0 0 chr10 28880208 28880264 -111436501 - Charlie1 DNA MER1_type 0 2761 2706 359 286 103 33 chr10 28880353 28880559 -111436206 - L1ME3A LINE L1 -207 5963 5744 2114 113 0 0 chr10 28880578 28880902 -111435863 + AluY SINE Alu 1 324 0 2156 96 3 7 chr10 28880916 28881209 -111435556 + AluSc SINE Alu 1 292 -17 241 196 0 0 chr10 28881269 28881325 -111435440 - Charlie1 DNA MER1_type -76 2685 2630 430 266 144 6 chr10 28881378 28881551 -111435214 - Charlie1 DNA MER1_type -2562 199 3 2401 94 0 0 chr10 28881826 28882135 -111434630 - AluSc SINE Alu 0 309 1 192 40 0 0 chr10 28882281 28882306 -111434459 + (CA)n Simple_repeat Simple_repeat 2 26 0 2050 142 10 0 chr10 28882991 28883294 -111433471 - AluSq SINE Alu -7 306 1 2256 102 0 0 chr10 28883326 28883619 -111433146 + AluSx SINE Alu 13 305 -7 198 254 42 56 chr10 28883763 28883834 -111432931 - L2 LINE L2 -1056 2258 2189 254 379 52 26 chr10 28884729 28884882 -111431883 + L2 LINE L2 2573 2729 -585 243 282 122 30 chr10 28885061 28885192 -111431573 + L2 LINE L2 2912 3054 -218 1847 131 50 0 chr10 28885205 28885487 -111431278 - AluSx SINE Alu -14 298 3 209 277 0 0 chr10 28885510 28885557 -111431208 + L2 LINE L2 3221 3267 -5 434 171 0 34 chr10 28886201 28886289 -111430476 + AluJ/FRAM SINE Alu 217 301 -11 28 0 0 0 chr10 28886297 28886325 -111430440 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 28886473 28886495 -111430270 + AT_rich Low_complexity Low_complexity 1 22 0 225 0 0 0 chr10 28886661 28886686 -111430079 + (TTTTTG)n Simple_repeat Simple_repeat 5 29 0 2431 85 3 0 chr10 28889544 28889851 -111426914 - AluSg SINE Alu -2 308 1 231 133 0 0 chr10 28890870 28890915 -111425850 + (ATG)n Simple_repeat Simple_repeat 1 45 0 701 250 75 48 chr10 28891089 28891421 -111425344 + L1ME LINE L1 5379 5659 -462 2002 111 7 0 chr10 28891750 28892052 -111424713 + AluSx SINE Alu 1 304 0 207 0 0 0 chr10 28892067 28892090 -111424675 + (TAG)n Simple_repeat Simple_repeat 1 23 0 2133 116 7 7 chr10 28892150 28892453 -111424312 - AluSq SINE Alu -10 303 1 25 0 0 0 chr10 28893107 28893132 -111423633 + AT_rich Low_complexity Low_complexity 1 25 0 200 302 0 0 chr10 28893172 28893235 -111423530 + T-rich Low_complexity Low_complexity 1 63 0 421 268 179 37 chr10 28893568 28893814 -111422951 - L2 LINE L2 -1407 1907 1627 2236 126 0 0 chr10 28894349 28894650 -111422115 - AluSx SINE Alu -11 301 1 808 256 18 27 chr10 28894925 28895144 -111421621 + MIR SINE MIR 32 248 -14 27 62 0 0 chr10 28895641 28895689 -111421076 + AT_rich Low_complexity Low_complexity 1 48 0 1879 161 3 10 chr10 28895698 28896003 -111420762 + AluJo SINE Alu 1 303 -9 1682 164 16 131 chr10 28896502 28896822 -111419943 - L1M4 LINE L1 -864 5282 5050 1684 114 40 120 chr10 28896822 28897009 -111419756 - AluSx SINE Alu -13 299 147 2305 97 0 0 chr10 28897009 28897320 -111419445 - AluY SINE Alu 0 311 1 1684 114 40 120 chr10 28897320 28897457 -111419308 - AluSx SINE Alu -165 147 1 1682 164 16 131 chr10 28897457 28897686 -111419079 - L1M4 LINE L1 -1096 5050 4796 714 190 7 0 chr10 28897720 28897857 -111418908 - L1MEc LINE L1 -4274 2122 1985 376 255 69 22 chr10 28897928 28898204 -111418561 - L1MEc LINE L1 -4904 1357 1000 1670 272 83 37 chr10 28898214 28898731 -111418034 - L1MEc LINE L1 -5651 745 190 2311 105 0 3 chr10 28898731 28899044 -111417721 - AluSx SINE Alu 0 312 1 1670 272 83 37 chr10 28899044 28899177 -111417588 - L1MEc LINE L1 -6206 190 65 459 318 62 88 chr10 28899192 28899544 -111417221 + L2 LINE L2 2930 3272 0 501 307 84 13 chr10 28900006 28900315 -111416450 - L1ME4a LINE L1 -283 5838 5508 2335 87 0 7 chr10 28900322 28900620 -111416145 - AluSg SINE Alu -14 296 1 2204 107 0 7 chr10 28901126 28901425 -111415340 - AluSx SINE Alu -15 297 1 29 47 0 0 chr10 28901922 28901965 -111414800 + AT_rich Low_complexity Low_complexity 1 43 0 197 277 0 0 chr10 28902076 28902123 -111414642 + L2 LINE L2 3226 3272 0 219 192 39 64 chr10 28903463 28903541 -111413224 + MIR SINE MIR 176 251 -11 428 279 84 6 chr10 28905840 28906019 -111410746 - L2 LINE L2 -410 2904 2712 26 64 0 0 chr10 28906330 28906377 -111410388 + AT_rich Low_complexity Low_complexity 1 47 0 1639 84 0 50 chr10 28906685 28906923 -111409842 - AluY SINE Alu -6 305 80 2127 124 0 13 chr10 28906952 28907126 -111409639 - AluSx SINE Alu -5 307 137 2300 105 0 3 chr10 28907126 28907439 -111409326 - AluSx SINE Alu 0 312 1 2127 124 0 13 chr10 28907439 28907571 -111409194 - AluSx SINE Alu -175 137 5 21 0 0 0 chr10 28907962 28907983 -111408782 + AT_rich Low_complexity Low_complexity 1 21 0 2561 162 44 25 chr10 28908062 28908580 -111408185 - L1MB8 LINE L1 0 6178 5651 25 31 0 0 chr10 28909002 28909034 -111407731 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr10 28909064 28909092 -111407673 + AT_rich Low_complexity Low_complexity 1 28 0 693 267 24 34 chr10 28909718 28909924 -111406841 - MIR SINE MIR -24 238 35 758 224 22 22 chr10 28910200 28910383 -111406382 - MER58A DNA MER1_type -4 220 38 2116 124 6 39 chr10 28910998 28911185 -111405580 - MER46B DNA MER2_type -2495 236 190 2427 45 38 3 chr10 28911185 28911477 -111405288 - AluY SINE Alu -9 302 1 2116 124 6 39 chr10 28911477 28911640 -111405125 - MER46B DNA MER2_type -2541 190 23 1449 179 97 24 chr10 28911640 28911969 -111404796 - MER47A DNA MER2_type 0 366 14 335 246 0 0 chr10 28911980 28912049 -111404716 - MER47A DNA MER2_type -297 69 1 584 180 45 0 chr10 28912247 28912358 -111404407 - L1M3 LINE L1 -404 5779 5664 1869 128 75 0 chr10 28912715 28912996 -111403769 + AluSx SINE Alu 2 303 -9 1648 182 7 4 chr10 28914326 28914601 -111402164 + AluJo SINE Alu 5 280 -32 204 40 0 0 chr10 28914601 28914626 -111402139 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 261 0 0 0 chr10 28915783 28915812 -111400953 + (TG)n Simple_repeat Simple_repeat 2 30 0 499 81 0 14 chr10 28915832 28915906 -111400859 + MER34C LTR ERV1 424 496 -89 1903 125 26 42 chr10 28916432 28916744 -111400021 - AluSx SINE Alu -5 307 1 1928 119 16 3 chr10 28917363 28917666 -111399099 - L1PA13 LINE L1 -3 6160 5854 1759 102 27 5 chr10 28917667 28918088 -111398677 + L1P4 LINE L1 5067 5496 -665 * 3081 139 28 11 chr10 28918075 28918643 -111398122 + L1M2 LINE L1 5219 5797 -503 480 282 176 0 chr10 28918615 28918803 -111397962 + L1PA16 LINE L1 5936 6156 -10 * 1991 135 3 10 chr10 28918831 28919128 -111397637 + AluSq SINE Alu 1 295 -18 2067 149 95 46 chr10 28919129 28919625 -111397140 + L1MA5 LINE L1 5776 6295 -5 398 259 202 6 chr10 28919655 28919834 -111396931 + MLT1G1 LTR MaLR 78 251 -279 * 559 234 69 7 chr10 28919831 28919976 -111396789 + MLT1G1 LTR MaLR 429 582 -13 256 305 10 0 chr10 28920276 28920374 -111396391 - MLT1G3 LTR MaLR -180 415 228 1754 143 16 147 chr10 28920378 28920534 -111396231 - L1 LINE L1 -908 5238 5063 2091 68 0 15 chr10 28920534 28920797 -111395968 - AluY SINE Alu -52 259 1 1754 143 16 147 chr10 28920797 28921136 -111395629 - L1 LINE L1 -1083 5063 4808 2268 86 24 0 chr10 28921358 28921650 -111395115 + AluY SINE Alu 1 299 -12 30 27 0 0 chr10 28922613 28922650 -111394115 + AT_rich Low_complexity Low_complexity 1 37 0 1117 165 5 31 chr10 28922692 28922886 -111393879 - AluJo SINE Alu -123 189 1 420 216 222 6 chr10 28923004 28923166 -111393599 - L1ME1 LINE L1 -4 6162 5966 1730 119 84 21 chr10 28923215 28923500 -111393265 + AluSg SINE Alu 1 303 -7 1775 157 3 20 chr10 28923503 28923803 -111392962 + AluJo SINE Alu 1 295 -17 200 191 0 0 chr10 28923835 28923877 -111392888 + (TG)n Simple_repeat Simple_repeat 1 42 0 379 337 86 6 chr10 28924261 28924424 -111392341 - MIR3 SINE MIR -3 205 30 23 0 0 0 chr10 28925482 28925505 -111391260 + AT_rich Low_complexity Low_complexity 1 23 0 437 189 75 9 chr10 28926218 28926324 -111390441 - L1MA9 LINE L1 -37 6275 6163 1792 183 10 0 chr10 28926958 28927259 -111389506 - AluSx SINE Alu -8 304 1 994 224 0 0 chr10 28928360 28928525 -111388240 + FAM SINE Alu 1 165 -10 1986 138 0 47 chr10 28928984 28929304 -111387461 + AluJo SINE Alu 1 305 -7 2278 101 0 3 chr10 28930653 28930951 -111385814 + AluSg SINE Alu 1 297 -13 26 50 0 0 chr10 28931740 28931780 -111384985 + AT_rich Low_complexity Low_complexity 1 40 0 2047 130 3 10 chr10 28932117 28932416 -111384349 - AluSx SINE Alu -11 301 5 246 296 127 96 chr10 28933348 28933701 -111383064 + L2 LINE L2 2745 3108 -164 1652 209 88 18 chr10 28934784 28935464 -111381301 - L1MC4 LINE L1 -92 7716 7005 3112 212 40 64 chr10 28935479 28936424 -111380341 - L1MD3 LINE L1 -1 8041 7133 468 180 20 20 chr10 28936472 28936572 -111380193 - L1MC4 LINE L1 -1038 7004 6905 337 138 50 75 chr10 28936584 28936640 -111380125 - L1MC4 LINE L1 -1507 6535 6480 4175 162 57 48 chr10 28936640 28937494 -111379271 - MER6 DNA MER2_type -3 862 1 337 138 50 75 chr10 28937494 28937517 -111379248 - L1MC4 LINE L1 -1562 6480 6458 2319 182 46 116 chr10 28937845 28938503 -111378262 + LTR9 LTR ERV1 1 612 0 591 214 251 35 chr10 28938640 28938759 -111378006 - L1M4 LINE L1 -1489 4657 4565 2163 83 3 21 chr10 28938759 28939070 -111377695 - AluY SINE Alu 0 306 1 591 214 251 35 chr10 28939070 28939464 -111377301 - L1M4 LINE L1 -1581 4565 4032 815 187 22 0 chr10 28939507 28939646 -111377119 - MLT1E1 LTR MaLR 0 654 513 734 203 36 24 chr10 28939653 28940018 -111376747 + LTR9-int LTR ERV1 196 684 -5914 306 159 14 29 chr10 28940377 28940446 -111376319 + LTR9-int LTR ERV1 743 810 -5788 1901 78 19 183 chr10 28941774 28942185 -111374580 - LTR14A LTR ERVK 0 344 1 2134 118 0 0 chr10 28943225 28943512 -111373253 - AluSc SINE Alu -22 287 1 592 214 19 0 chr10 28943520 28943623 -111373142 - FLAM_C SINE Alu -36 107 3 347 328 6 70 chr10 28943791 28943962 -111372803 + MER4A-int LTR ERV1 2549 2708 -4093 264 270 43 60 chr10 28944724 28944909 -111371856 + MER4A-int LTR ERV1 4561 4742 -3014 1207 316 57 44 chr10 28945899 28946925 -111369840 + MER4A-int LTR ERV1 5633 6671 -451 399 41 0 0 chr10 28947283 28947332 -111369433 + (TG)n Simple_repeat Simple_repeat 2 50 0 480 272 72 31 chr10 28947335 28947530 -111369235 + MER4A-int LTR ERV1 6395 6597 -1 2173 123 0 38 chr10 28947536 28947877 -111368888 + MER4A LTR ERV1 1 328 -336 475 72 0 29 chr10 28947968 28948037 -111368728 + MER4A LTR ERV1 356 422 -242 2160 87 7 21 chr10 28948063 28948352 -111368413 + AluSp SINE Alu 13 297 -16 528 175 196 35 chr10 28948373 28948516 -111368249 + MER4C LTR ERV1 300 465 0 770 178 109 83 chr10 28948518 28948794 -111367971 + MER4-int LTR ERV1 1 283 -6315 462 201 120 27 chr10 28948861 28949045 -111367720 + MER4-int LTR ERV1 473 673 -5925 890 168 0 0 chr10 28950896 28951027 -111365738 - FLAM_C SINE Alu -1 132 2 262 196 0 0 chr10 28951151 28951202 -111365563 + MER4A-int LTR ERV1 3104 3154 -1800 8201 20 0 0 chr10 28952364 28953938 -111362827 - L1PA4 LINE L1 -16 6139 4566 568 339 42 58 chr10 28954663 28955330 -111361435 + MER4A-int LTR ERV1 2139 2794 -1853 1359 324 51 37 chr10 28955765 28956782 -111359983 + MER4A-int LTR ERV1 5633 6663 -459 768 196 22 80 chr10 28957149 28957373 -111359392 + MER4A-int LTR ERV1 6385 6595 -3 1999 143 9 59 chr10 28957382 28957778 -111358987 + MER4A LTR ERV1 1 224 -241 298 218 0 0 chr10 28958035 28958090 -111358675 + MER4-int LTR ERV1 750 804 -5794 2732 159 16 26 chr10 28958190 28958643 -111358122 + MER83 LTR ERV1 1 448 0 2401 63 10 0 chr10 28960548 28960851 -111355914 - AluY SINE Alu -5 306 1 1955 121 0 17 chr10 28961308 28961623 -111355142 - AluSx SINE Alu 0 310 1 180 0 26 79 chr10 28961835 28961873 -111354892 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 240 240 67 0 chr10 28962774 28962849 -111353916 - LTR40a LTR ERVL 0 519 440 345 305 49 59 chr10 28962853 28963056 -111353709 + LTR40a LTR ERVL 209 409 -110 297 293 0 0 chr10 28963054 28963112 -111353653 - LTR40a LTR ERVL -222 297 240 * 356 216 196 61 chr10 28963193 28963277 -111353488 - LTR40a LTR ERVL -351 168 97 2422 90 0 0 chr10 28963277 28963577 -111353188 + AluSx SINE Alu 1 300 -12 356 216 196 61 chr10 28963577 28963640 -111353125 - LTR40a LTR ERVL -422 97 1 334 0 43 0 chr10 28963903 28963949 -111352816 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 1832 136 4 4 chr10 28963960 28964232 -111352533 - AluSx SINE Alu -40 272 1 1541 176 46 40 chr10 28964265 28964567 -111352198 + AluJo SINE Alu 1 304 -8 377 282 86 21 chr10 28964762 28964996 -111351769 + L1MEc LINE L1 1390 1604 -4780 310 281 45 0 chr10 28965702 28965791 -111350974 + L1 LINE L1 4739 4831 -1315 1677 157 10 33 chr10 28966717 28967022 -111349743 - AluJo SINE Alu -14 298 1 414 185 0 0 chr10 28967508 28967589 -111349176 - AluS SINE Alu -4 306 226 274 180 101 34 chr10 28967629 28967718 -111349047 + L1P LINE L1 3878 3972 -2174 1669 225 33 110 chr10 28967784 28968383 -111348382 - MER74A LTR ERVL -5 553 1 1891 158 66 64 chr10 28968789 28969227 -111347538 + Tigger6a DNA MER2_type 38 476 -607 2391 147 59 17 chr10 28969338 28969713 -111347052 - MSTB LTR MaLR 0 426 31 1865 141 75 36 chr10 28969713 28970074 -111346691 - THE1C LTR MaLR 0 375 1 2391 147 59 17 chr10 28970074 28970107 -111346658 - MSTB LTR MaLR -395 31 1 354 199 17 152 chr10 28970116 28970347 -111346418 + L1MC5 LINE L1 7382 7581 -380 2034 111 0 0 chr10 28970349 28970620 -111346145 + AluSg1 SINE Alu 1 271 -38 198 91 0 0 chr10 28970629 28970662 -111346103 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 2193 89 0 24 chr10 28970951 28971242 -111345523 - AluSq SINE Alu -23 290 7 1349 188 12 0 chr10 28971748 28971993 -111344772 + AluSx SINE Alu 36 283 -29 336 24 0 0 chr10 28974157 28974198 -111342567 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 394 284 165 17 chr10 28974479 28974655 -111342110 + MIR SINE MIR 24 225 -37 204 300 17 42 chr10 28974630 28974750 -111342015 + MIR SINE MIR 134 250 -12 * 744 200 0 0 chr10 28976451 28976576 -111340189 - AluJb SINE Alu -186 126 2 209 356 35 17 chr10 28977000 28977115 -111339650 + MIR SINE MIR 24 140 -122 187 368 61 0 chr10 28979099 28979213 -111337552 - MIR SINE MIR -62 200 80 2841 298 47 36 chr10 28980567 28982170 -111334595 + L1PBa LINE L1 3 1623 -5240 * 5155 160 62 30 chr10 28982151 28983427 -111333338 + L1PBb LINE L1 1 1325 -4879 1957 125 24 20 chr10 28983427 28983722 -111333043 + AluSx SINE Alu 1 296 -16 5155 160 62 30 chr10 28983722 28983847 -111332918 + L1PBb LINE L1 1325 1445 -4759 3544 232 43 32 chr10 28983875 28985278 -111331487 + L1PBb LINE L1 1807 3268 -2935 2442 98 0 6 chr10 28985278 28985593 -111331172 - AluSq SINE Alu 0 313 1 3544 232 43 32 chr10 28985593 28985613 -111331152 + L1PBb LINE L1 3268 3286 -2917 484 222 0 9 chr10 28985839 28985947 -111330818 - MER104 DNA Tc2 -71 109 3 1928 158 7 3 chr10 28985961 28986258 -111330507 - AluJo SINE Alu -14 298 1 608 251 101 31 chr10 28986348 28986575 -111330190 - MIR SINE MIR 0 262 20 2230 105 20 80 chr10 28986689 28987088 -111329677 - THE1C LTR MaLR 0 375 1 2207 107 0 20 chr10 28987877 28988177 -111328588 - AluSx SINE Alu -18 294 1 2120 119 3 3 chr10 28988979 28989272 -111327493 - AluSg SINE Alu -17 293 1 252 302 0 31 chr10 28989612 28989708 -111327057 + MIR SINE MIR 14 106 -156 997 149 0 0 chr10 29039882 29040030 -111276735 + AluJb SINE Alu 149 296 -16 1876 107 16 0 chr10 29040069 29040322 -111276443 + AluSx SINE Alu 30 286 -26 1459 167 58 12 chr10 29040616 29040874 -111275891 + AluJb SINE Alu 11 280 -32 2173 84 32 3 chr10 29042650 29042934 -111273831 + AluSq SINE Alu 1 292 -21 2112 120 7 23 chr10 29043396 29043697 -111273068 + AluSx SINE Alu 1 296 -16 1924 125 14 4 chr10 29045526 29045848 -111270917 - AluSq SINE Alu 0 325 1 2532 79 0 0 chr10 29045937 29046241 -111270524 - AluSc SINE Alu -4 305 2 2142 82 43 0 chr10 29046500 29046781 -111269984 + AluSp SINE Alu 2 294 -19 2308 113 6 0 chr10 29047688 29047999 -111268766 - AluSq SINE Alu 0 313 1 216 97 0 0 chr10 29048250 29048281 -111268484 + (TCCC)n Simple_repeat Simple_repeat 4 34 0 449 17 0 17 chr10 29048292 29048351 -111268414 + (TG)n Simple_repeat Simple_repeat 2 59 0 1570 117 13 9 chr10 29048397 29048627 -111268138 + AluSg/x SINE Alu 73 303 -7 366 96 0 0 chr10 29048627 29048679 -111268086 - U2 snRNA snRNA -136 52 1 421 281 46 32 chr10 29048871 29049088 -111267677 + MLT1J LTR MaLR 292 511 0 2332 86 3 10 chr10 29049147 29049451 -111267314 + AluSp SINE Alu 1 302 -11 2056 120 0 3 chr10 29049507 29049829 -111266936 + AluSx SINE Alu 1 321 0 2406 72 0 0 chr10 29049894 29050187 -111266578 + AluSc SINE Alu 1 293 -16 2247 97 10 0 chr10 29051099 29051389 -111265376 + AluSp SINE Alu 1 293 -20 239 240 132 66 chr10 29051604 29051725 -111265040 - MIR SINE MIR -77 185 57 29 47 0 0 chr10 29052194 29052237 -111264528 + AT_rich Low_complexity Low_complexity 1 43 0 1781 147 56 3 chr10 29052824 29053109 -111263656 - AluSx SINE Alu -12 300 1 21 0 0 0 chr10 29053120 29053141 -111263624 + AT_rich Low_complexity Low_complexity 1 21 0 369 301 30 38 chr10 29053304 29053437 -111263328 - L2 LINE L2 -4 3268 3137 2161 110 7 0 chr10 29054008 29054317 -111262448 + AluY SINE Alu 1 311 0 1115 121 0 12 chr10 29054367 29054533 -111262232 - AluSg/x SINE Alu -12 298 135 1380 128 92 12 chr10 29054936 29055187 -111261578 + AluY SINE Alu 33 303 -8 3748 67 69 4 chr10 29055218 29055615 -111261150 + MER41A LTR ERV1 1 441 -113 2253 99 0 43 chr10 29055615 29055937 -111260828 - AluSx SINE Alu -4 308 1 3748 67 69 4 chr10 29055937 29056059 -111260706 + MER41A LTR ERV1 441 554 0 1490 193 37 3 chr10 29056070 29056365 -111260400 + AluJo SINE Alu 1 305 -7 1915 119 0 0 chr10 29056704 29056957 -111259808 + AluSx SINE Alu 5 257 -55 326 159 0 63 chr10 29057112 29057175 -111259590 - L2 LINE L2 0 3313 3255 1778 143 16 48 chr10 29058149 29058464 -111258301 - AluJo SINE Alu -6 306 2 2326 107 0 7 chr10 29058640 29058948 -111257817 + AluSq SINE Alu 5 310 -3 751 132 0 9 chr10 29058998 29059112 -111257653 - FLAM_C SINE Alu -25 118 6 926 174 17 6 chr10 29059162 29059334 -111257431 + FAM SINE Alu 2 175 0 2566 62 0 0 chr10 29060025 29060334 -111256431 + AluY SINE Alu 1 309 -2 843 171 185 38 chr10 29060798 29061009 -111255756 - AluSx SINE Alu -70 242 1 1355 176 77 15 chr10 29061107 29061380 -111255385 - AluJo SINE Alu -22 290 1 22 56 0 0 chr10 29061470 29061506 -111255259 + AT_rich Low_complexity Low_complexity 1 36 0 1338 167 13 9 chr10 29061519 29061747 -111255018 + AluJb SINE Alu 3 231 -81 1688 124 8 4 chr10 29061887 29062146 -111254619 - AluY SINE Alu -51 260 1 467 17 0 0 chr10 29062166 29062224 -111254541 - MER41A LTR ERV1 -97 457 400 2181 91 17 3 chr10 29062287 29062584 -111254181 + AluSx SINE Alu 1 301 -11 322 283 53 44 chr10 29062586 29062699 -111254066 + MIR3 SINE MIR 41 154 -54 285 350 29 19 chr10 29063032 29063135 -111253630 + MIR SINE MIR 2 105 -157 182 226 0 0 chr10 29063157 29063188 -111253577 + L2 LINE L2 3264 3294 -19 769 325 77 31 chr10 29063298 29063689 -111253076 - L2 LINE L2 -1 3312 2904 2108 233 113 30 chr10 29063691 29063816 -111252949 - L2 LINE L2 -781 2533 2420 2136 99 27 3 chr10 29063816 29064109 -111252656 - AluSq SINE Alu -13 300 1 2108 233 113 30 chr10 29064109 29064709 -111252056 - L2 LINE L2 -894 2420 1748 251 270 230 11 chr10 29064777 29064951 -111251814 - L2 LINE L2 -1921 1393 1182 347 278 41 0 chr10 29065073 29065170 -111251595 + L3 LINE CR1 1460 1560 -17 1291 133 0 0 chr10 29065573 29065753 -111251012 - AluJ SINE Alu -4 308 129 1687 183 0 13 chr10 29065761 29066062 -111250703 - AluJo SINE Alu -15 297 1 731 169 0 8 chr10 29066111 29066229 -111250536 - AluJ SINE Alu -192 120 4 1372 215 129 22 chr10 29066817 29067305 -111249460 - L1ME3A LINE L1 0 6170 5631 284 200 56 11 chr10 29068173 29068263 -111248502 - L1MC4 LINE L1 -6 8036 7943 1441 175 57 0 chr10 29068278 29068524 -111248241 - AluJb SINE Alu -52 260 1 30 27 0 0 chr10 29068563 29068600 -111248165 + AT_rich Low_complexity Low_complexity 1 37 0 380 209 173 0 chr10 29068600 29068710 -111248055 - L1MC4 LINE L1 -147 7895 7767 617 151 0 0 chr10 29068710 29068803 -111247962 + AluSx SINE Alu 3 95 -217 1642 99 14 5 chr10 29068820 29069043 -111247722 + AluSx SINE Alu 72 296 -14 496 188 34 172 chr10 29069051 29069376 -111247389 - L1MC4 LINE L1 -273 7769 7490 * 583 213 71 36 chr10 29069375 29069600 -111247165 - L1ME4a LINE L1 -295 5826 5594 361 256 35 81 chr10 29069716 29069888 -111246877 + L1MC4a LINE L1 7294 7457 -351 395 305 62 9 chr10 29070287 29070513 -111246252 - L1MC4 LINE L1 -15 8027 7790 27 29 0 0 chr10 29070885 29070919 -111245846 + AT_rich Low_complexity Low_complexity 1 34 0 866 153 0 0 chr10 29072510 29072641 -111244124 + AluJo SINE Alu 1 131 -181 1971 140 39 0 chr10 29072647 29072932 -111243833 + AluSx SINE Alu 3 298 -14 933 220 23 0 chr10 29072977 29073154 -111243611 + AluJo SINE Alu 118 298 -14 1281 162 165 13 chr10 29073319 29073622 -111243143 + L1MB7 LINE L1 5823 6171 -13 2234 118 0 3 chr10 29074847 29075152 -111241613 - AluSq SINE Alu -7 306 3 1637 179 24 30 chr10 29076091 29076388 -111240377 + AluJo SINE Alu 1 295 -17 537 230 0 0 chr10 29076406 29076506 -111240259 + FRAM SINE Alu 1 100 -76 1007 127 63 39 chr10 29076565 29076770 -111239995 + MER2 DNA MER2_type 1 210 -135 244 282 28 0 chr10 29076798 29076869 -111239896 + MER2 DNA MER2_type 273 345 0 2117 106 0 0 chr10 29077121 29077395 -111239370 - AluSx SINE Alu -38 274 1 841 149 0 15 chr10 29077801 29077935 -111238830 - FLAM_C SINE Alu -1 132 1 258 200 12 47 chr10 29077937 29077985 -111238780 + T-rich Low_complexity Low_complexity 1 46 -36 2080 151 3 0 chr10 29077985 29078296 -111238469 - AluSp SINE Alu -1 312 1 258 200 12 47 chr10 29078296 29078332 -111238433 + T-rich Low_complexity Low_complexity 46 82 0 2365 94 0 0 chr10 29078817 29079116 -111237649 + AluSx SINE Alu 1 299 -13 378 207 63 9 chr10 29079217 29079328 -111237437 + Charlie7 DNA MER1_type 2465 2581 -31 738 163 0 37 chr10 29079353 29079488 -111237277 - FLAM_C SINE Alu -3 130 1 2026 110 46 0 chr10 29079602 29079884 -111236881 - AluSx SINE Alu -17 295 1 811 301 106 3 chr10 29079945 29080304 -111236461 - L1ME4a LINE L1 -114 6007 5612 339 186 0 43 chr10 29080671 29080740 -111236025 + AluJo SINE Alu 78 142 -160 2282 73 11 7 chr10 29080740 29081026 -111235739 + AluSx SINE Alu 1 287 -25 2174 109 0 3 chr10 29081579 29081881 -111234884 - AluSc SINE Alu -8 301 1 360 151 15 9 chr10 29081972 29082053 -111234712 - MER41A LTR ERV1 -88 466 388 227 332 161 16 chr10 29082137 29082330 -111234435 - L2 LINE L2 -225 3047 2827 1548 170 4 4 chr10 29082330 29082583 -111234182 + AluSx SINE Alu 1 253 -59 1634 155 0 4 chr10 29082728 29082973 -111233792 + AluSx SINE Alu 11 254 -58 1431 160 115 4 chr10 29083232 29083501 -111233264 - AluJb SINE Alu -13 299 1 1462 105 12 17 chr10 29083775 29084128 -111232637 + L1MA3 LINE L1 5254 5607 -698 2321 88 3 0 chr10 29084128 29084424 -111232341 + AluSp SINE Alu 1 297 -16 1462 105 12 17 chr10 29084424 29085024 -111231741 + L1MA3 LINE L1 5607 6287 -18 626 156 73 9 chr10 29085050 29085159 -111231606 - FLAM_C SINE Alu -17 116 1 37 0 0 0 chr10 29085189 29085226 -111231539 + AT_rich Low_complexity Low_complexity 1 37 0 739 197 0 0 chr10 29085416 29085533 -111231232 + AluJo/FLAM SINE Alu 2 118 -194 2225 133 0 0 chr10 29085533 29085841 -111230924 + AluSx SINE Alu 1 308 -4 22 56 0 0 chr10 29085935 29085971 -111230794 + AT_rich Low_complexity Low_complexity 1 36 0 2195 110 0 13 chr10 29086350 29086518 -111230247 - AluSx SINE Alu -11 301 132 1919 127 4 0 chr10 29086518 29086794 -111229971 - AluSp SINE Alu -5 308 32 2234 101 3 3 chr10 29086794 29087092 -111229673 - AluSx SINE Alu -14 298 1 2195 110 0 13 chr10 29087092 29087222 -111229543 - AluSx SINE Alu -178 134 6 442 318 112 40 chr10 29088069 29088443 -111228322 + L2 LINE L2 255 655 -2659 1105 160 55 10 chr10 29088451 29088651 -111228114 - AluJb SINE Alu -21 291 83 2096 145 7 0 chr10 29088674 29088984 -111227781 + AluJb SINE Alu 1 312 0 2454 93 0 3 chr10 29089117 29089430 -111227335 + AluSq SINE Alu 1 312 -1 684 175 114 0 chr10 29089450 29089564 -111227201 + FLAM_A SINE Alu 1 127 -6 564 114 38 0 chr10 29089616 29089695 -111227070 + AluSg/x SINE Alu 217 298 -14 24 32 0 0 chr10 29089784 29089815 -111226950 + AT_rich Low_complexity Low_complexity 1 31 0 893 102 14 54 chr10 29089817 29089964 -111226801 - L1PB3 LINE L1 -3 6151 6011 1107 143 6 0 chr10 29090473 29090641 -111226124 + AluSx SINE Alu 1 169 -143 2063 139 0 0 chr10 29090805 29091100 -111225665 + AluSx SINE Alu 1 295 -17 1878 179 68 46 chr10 29091187 29091644 -111225121 - MLT1C LTR MaLR 0 467 1 2273 82 3 0 chr10 29091899 29092212 -111224553 - AluSp SINE Alu 0 314 1 243 235 59 0 chr10 29092214 29092282 -111224483 + L2 LINE L2 1872 1943 -1371 233 312 197 45 chr10 29092330 29092545 -111224220 + L2 LINE L2 2138 2319 -995 2412 96 0 0 chr10 29092545 29092847 -111223918 + AluSx SINE Alu 1 302 -10 233 312 197 45 chr10 29092847 29093189 -111223576 + L2 LINE L2 2319 2780 -534 2099 125 6 13 chr10 29093565 29093876 -111222889 - AluSg1 SINE Alu 0 309 1 193 362 142 16 chr10 29094340 29094467 -111222298 + L2 LINE L2 3112 3254 -18 2201 113 0 13 chr10 29094839 29095141 -111221624 + AluSx SINE Alu 1 298 -14 2352 97 0 10 chr10 29096002 29096313 -111220452 + AluY SINE Alu 1 308 -3 2646 163 27 29 chr10 29096848 29097105 -111219660 - MER83 LTR ERV1 0 448 190 2150 110 0 0 chr10 29097105 29097416 -111219349 - AluSx SINE Alu 0 311 1 2646 163 27 29 chr10 29097416 29097606 -111219159 - MER83 LTR ERV1 -258 190 1 2278 95 0 20 chr10 29097827 29098131 -111218634 + AluSq SINE Alu 1 298 -15 2123 91 14 17 chr10 29098383 29098517 -111218248 + AluSg SINE Alu 1 134 -176 2299 101 0 3 chr10 29098517 29098824 -111217941 + AluY SINE Alu 1 306 -5 2123 91 14 17 chr10 29098824 29098985 -111217780 + AluSg SINE Alu 134 295 -15 1666 177 14 0 chr10 29099192 29099474 -111217291 + AluJb SINE Alu 5 290 -22 832 156 8 8 chr10 29099542 29099670 -111217095 - FLAM_C SINE Alu -5 128 1 2011 74 0 19 chr10 29099992 29100279 -111216486 - AluSc SINE Alu 0 308 27 1926 149 19 13 chr10 29100426 29100734 -111216031 - AluJo SINE Alu -2 310 1 989 250 59 34 chr10 29100744 29101068 -111215697 - L2 LINE L2 0 3313 2982 2383 88 0 0 chr10 29101277 29101571 -111215194 - AluSx SINE Alu -6 306 13 2179 92 49 0 chr10 29102078 29102362 -111214403 + AluSx SINE Alu 5 302 -10 999 174 6 0 chr10 29102362 29102523 -111214242 + AluSg/x SINE Alu 134 295 -17 2309 83 3 0 chr10 29102532 29102821 -111213944 + AluSx SINE Alu 2 291 -21 2132 110 0 0 chr10 29103743 29104034 -111212731 + AluSg SINE Alu 1 291 -19 2107 142 0 0 chr10 29104193 29104489 -111212276 + AluSx SINE Alu 1 296 -16 595 221 18 90 chr10 29105632 29105953 -111210812 + MER34B LTR ERV1 5 360 -205 733 83 10 0 chr10 29105953 29106049 -111210716 - AluSg SINE Alu -213 97 1 762 179 0 0 chr10 29106083 29106200 -111210565 + FLAM_C SINE Alu 2 118 -25 26 0 0 27 chr10 29106202 29106214 -111210551 + AT_rich Low_complexity Low_complexity 1 12 -24 2548 21 21 0 chr10 29106214 29106494 -111210271 + L1PA5 LINE L1 5861 6146 -8 26 0 0 27 chr10 29106494 29106518 -111210247 + AT_rich Low_complexity Low_complexity 12 36 0 24 24 0 24 chr10 29106697 29106726 -111210039 + AT_rich Low_complexity Low_complexity 1 30 -11 2190 121 0 0 chr10 29106726 29107016 -111209749 + AluSx SINE Alu 1 290 -22 24 24 0 24 chr10 29107016 29107028 -111209737 + AT_rich Low_complexity Low_complexity 30 41 0 542 323 113 5 chr10 29107425 29107747 -111209018 - L2 LINE L2 -617 2697 2284 241 143 24 0 chr10 29107764 29107806 -111208959 + MLT1F1 LTR MaLR 17 59 -508 2547 156 96 19 chr10 29107806 29108325 -111208440 + L1MC1 LINE L1 5768 6326 -7 1970 132 0 14 chr10 29108325 29108621 -111208144 + AluSq SINE Alu 1 292 -21 1084 174 126 30 chr10 29108638 29108971 -111207794 + L1 LINE L1 3049 3413 -2733 24 32 0 0 chr10 29109007 29109038 -111207727 + AT_rich Low_complexity Low_complexity 1 31 0 310 216 150 65 chr10 29109074 29109227 -111207538 - MLT1K LTR MaLR -302 286 121 2209 89 3 10 chr10 29109413 29109704 -111207061 + AluSg SINE Alu 1 289 -21 417 239 28 0 chr10 29110221 29110330 -111206435 - L1MC4 LINE L1 -5 8037 7926 490 152 168 0 chr10 29110424 29110549 -111206216 - L1ME1 LINE L1 -5 6161 6016 1239 187 85 30 chr10 29110560 29110891 -111205874 - L1ME1 LINE L1 -582 5602 5254 2448 56 3 16 chr10 29110910 29111214 -111205551 - AluY SINE Alu -11 300 1 181 299 0 30 chr10 29111482 29111549 -111205216 - L2 LINE L2 -7 3265 3201 886 149 0 0 chr10 29111706 29111827 -111204938 + FLAM_C SINE Alu 1 121 -12 21 0 0 0 chr10 29111829 29111850 -111204915 + AT_rich Low_complexity Low_complexity 1 21 0 326 156 32 50 chr10 29111931 29112011 -111204754 - LTR41 LTR ERVL 0 523 440 857 174 12 124 chr10 29112022 29112165 -111204600 + AluJo SINE Alu 6 163 -149 2178 92 6 48 chr10 29112165 29112480 -111204285 + AluSx SINE Alu 2 303 -9 2217 119 0 7 chr10 29112490 29112792 -111203973 + AluSx SINE Alu 3 302 -10 857 174 12 124 chr10 29112792 29112879 -111203886 + AluJo SINE Alu 173 220 -92 2391 85 3 0 chr10 29112910 29113204 -111203561 + AluSg SINE Alu 1 295 -15 306 250 176 27 chr10 29113807 29114036 -111202729 + LTR41 LTR ERVL 510 795 0 1547 127 130 16 chr10 29114204 29114457 -111202308 + AluSg SINE Alu 14 295 -15 527 144 29 0 chr10 29115123 29115262 -111201503 + (TA)n Simple_repeat Simple_repeat 2 144 0 2080 134 3 7 chr10 29115379 29115686 -111201079 + AluSx SINE Alu 1 306 -6 1089 228 134 55 chr10 29116038 29116820 -111199945 + L1ME LINE L1 1107 1940 -4706 1787 171 7 0 chr10 29116861 29117187 -111199578 - AluSx SINE Alu 0 328 1 419 208 54 13 chr10 29117196 29117377 -111199388 + L1ME LINE L1 2525 2755 -3931 2431 70 0 16 chr10 29117377 29117691 -111199074 + AluY SINE Alu 1 309 -2 2301 72 10 13 chr10 29117701 29118007 -111198758 + AluY SINE Alu 1 305 -6 25 0 0 0 chr10 29118630 29118655 -111198110 + AT_rich Low_complexity Low_complexity 1 25 0 423 0 0 0 chr10 29119068 29119115 -111197650 + (TG)n Simple_repeat Simple_repeat 2 48 0 1726 104 100 4 chr10 29119321 29119603 -111197162 - AluSq SINE Alu 0 307 1 2398 86 3 0 chr10 29119940 29120243 -111196522 + AluSg SINE Alu 1 304 -6 1972 122 27 20 chr10 29120412 29120707 -111196058 + AluSx SINE Alu 1 297 -15 1283 217 112 0 chr10 29121249 29121507 -111195258 + AluJo SINE Alu 1 287 -15 195 167 0 0 chr10 29121509 29121551 -111195214 + (TATG)n Simple_repeat Simple_repeat 3 44 0 314 333 175 4 chr10 29121597 29121820 -111194945 + L1ME LINE L1 4226 4480 -2164 386 297 126 50 chr10 29121883 29122398 -111194367 + L1ME LINE L1 4603 5156 -1488 674 292 120 47 chr10 29122926 29123392 -111193373 + L1ME LINE L1 5816 6315 -304 795 111 21 175 chr10 29123781 29124017 -111192748 + AluSp SINE Alu 124 330 0 749 130 19 0 chr10 29124077 29124185 -111192580 + FLAM_C SINE Alu 16 125 -18 456 358 121 9 chr10 29124636 29124966 -111191799 + L2 LINE L2 2365 2731 -583 182 417 12 0 chr10 29125330 29125414 -111191351 + L2 LINE L2 3186 3270 -2 1723 205 30 0 chr10 29126112 29126415 -111190350 - AluJb SINE Alu 0 312 1 22 0 0 0 chr10 29126853 29126875 -111189890 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr10 29126896 29126924 -111189841 + AT_rich Low_complexity Low_complexity 1 28 0 226 296 40 19 chr10 29127625 29127768 -111188997 + MER5A DNA MER1_type 1 183 -6 21 0 0 31 chr10 29127857 29127868 -111188897 + AT_rich Low_complexity Low_complexity 1 11 -20 2135 116 7 3 chr10 29127868 29128178 -111188587 - AluY SINE Alu 0 311 1 21 0 0 31 chr10 29128178 29128198 -111188567 + AT_rich Low_complexity Low_complexity 11 31 0 500 17 0 0 chr10 29128199 29128257 -111188508 - MER41B LTR ERV1 -97 538 481 1307 90 6 0 chr10 29128361 29128547 -111188218 + AluSp SINE Alu 118 304 0 2305 70 7 10 chr10 29128574 29128873 -111187892 + AluY SINE Alu 1 298 -13 993 107 75 164 chr10 29129879 29130022 -111186743 + L1MD3 LINE L1 7730 7837 -158 2392 67 0 0 chr10 29130022 29130307 -111186458 + AluY SINE Alu 7 291 -20 993 107 75 164 chr10 29130307 29130444 -111186321 + L1MD3 LINE L1 7837 7985 -10 25 0 0 0 chr10 29130862 29130887 -111185878 + AT_rich Low_complexity Low_complexity 1 25 0 1214 200 55 4 chr10 29131651 29131886 -111184879 + AluJo SINE Alu 46 292 -20 820 179 0 8 chr10 29132368 29132502 -111184263 + AluJo SINE Alu 2 134 -178 1776 236 167 24 chr10 29132686 29133278 -111183487 + LTR41 LTR ERVL 1 677 -96 1535 142 9 9 chr10 29133351 29133603 -111183162 - AluSx SINE Alu 0 312 58 2182 149 43 19 chr10 29133607 29134035 -111182730 + Tigger2 DNA MER2_type 13 2718 0 452 302 54 34 chr10 29134343 29134602 -111182163 + L1ME LINE L1 5519 5786 -335 2024 153 3 10 chr10 29134602 29134915 -111181850 + AluSx SINE Alu 1 311 -1 452 302 54 34 chr10 29134915 29134950 -111181815 + L1ME LINE L1 5786 5819 -302 2101 115 3 28 chr10 29134967 29135288 -111181477 + AluSq SINE Alu 1 313 0 622 155 31 0 chr10 29135288 29135385 -111181380 + AluJo/FRAM SINE Alu 197 296 -16 262 284 43 17 chr10 29135418 29135534 -111181231 - MIR SINE MIR -11 251 133 3783 119 38 35 chr10 29135537 29136095 -111180670 + MER41B LTR ERV1 1 563 -72 2257 97 10 0 chr10 29136095 29136395 -111180370 - AluY SINE Alu -7 304 2 3783 119 38 35 chr10 29136395 29136467 -111180298 + MER41B LTR ERV1 563 633 -2 516 179 1 120 chr10 29136474 29136624 -111180141 + MSTD LTR MaLR 13 145 -251 2601 42 0 7 chr10 29136778 29137085 -111179680 + AluY SINE Alu 5 309 -2 549 324 96 10 chr10 29138019 29138355 -111178410 + L2 LINE L2 2644 3008 -264 1350 73 6 0 chr10 29139737 29139914 -111176851 - AluSq SINE Alu -5 308 131 21 0 0 0 chr10 29140469 29140490 -111176275 + GC_rich Low_complexity Low_complexity 1 21 0 254 297 59 10 chr10 29141056 29141157 -111175608 - MIR SINE MIR -72 136 31 2235 66 0 62 chr10 29141177 29141497 -111175268 - AluY SINE Alu -10 301 2 1841 107 7 65 chr10 29141685 29141994 -111174771 - AluSx SINE Alu -21 291 1 1986 77 110 4 chr10 29142004 29142277 -111174488 - AluSq SINE Alu -11 302 1 31 26 0 0 chr10 29142800 29142838 -111173927 + AT_rich Low_complexity Low_complexity 1 38 0 1372 191 58 7 chr10 29143412 29143689 -111173076 + AluJo SINE Alu 1 291 -21 304 163 0 0 chr10 29143999 29144048 -111172717 - MLT2C2 LTR ERVL 0 464 416 810 193 0 37 chr10 29144091 29144252 -111172513 + AluJo SINE Alu 1 155 -157 1655 130 20 80 chr10 29144296 29144597 -111172168 - AluSx SINE Alu -29 283 1 1429 178 36 46 chr10 29145164 29145467 -111171298 - AluJb SINE Alu -8 304 5 2414 106 0 0 chr10 29145643 29145955 -111170810 + AluSq SINE Alu 1 312 -1 2200 102 3 3 chr10 29146400 29146695 -111170070 + AluSq SINE Alu 1 295 -18 30 0 0 0 chr10 29146702 29146732 -111170033 + AT_rich Low_complexity Low_complexity 1 30 0 430 342 78 22 chr10 29147075 29147522 -111169243 + L1MC/D LINE L1 5301 5772 -2036 2174 113 0 20 chr10 29147555 29147857 -111168908 + AluSx SINE Alu 1 296 -16 351 245 74 64 chr10 29147974 29148087 -111168678 + MER46C DNA MER2_type 1 111 -227 2281 99 3 3 chr10 29148087 29148391 -111168374 - AluSq SINE Alu -9 304 1 351 245 74 64 chr10 29148391 29148520 -111168245 + MER46C DNA MER2_type 111 293 -45 2319 97 0 26 chr10 29148793 29149104 -111167661 - AluY SINE Alu -8 303 1 1037 145 0 41 chr10 29149114 29149286 -111167479 - AluSg/x SINE Alu -18 292 128 1709 170 21 7 chr10 29149322 29149611 -111167154 - AluJo SINE Alu -17 295 3 2166 108 0 0 chr10 29149825 29150112 -111166653 - AluSx SINE Alu -25 287 1 319 193 20 29 chr10 29150719 29150792 -111165973 + AluJ/FLAM SINE Alu 1 57 -245 600 86 0 37 chr10 29150792 29150873 -111165892 - AluSg/x SINE Alu -17 295 218 37 0 0 0 chr10 29151001 29151038 -111165727 + AT_rich Low_complexity Low_complexity 1 37 0 739 197 0 0 chr10 29151228 29151345 -111165420 + AluJo/FLAM SINE Alu 2 118 -194 2241 130 0 0 chr10 29151345 29151653 -111165112 + AluSx SINE Alu 1 308 -4 22 56 0 0 chr10 29151747 29151783 -111164982 + AT_rich Low_complexity Low_complexity 1 36 0 2247 105 0 13 chr10 29152162 29152330 -111164435 - AluSx SINE Alu -11 301 132 1919 127 4 0 chr10 29152330 29152606 -111164159 - AluSp SINE Alu -5 308 32 2236 104 3 3 chr10 29152606 29152904 -111163861 - AluSx SINE Alu -14 298 1 2247 105 0 13 chr10 29152904 29153039 -111163726 - AluSx SINE Alu -178 134 1 2481 57 3 3 chr10 29153328 29153629 -111163136 + AluY SINE Alu 1 301 -10 2419 96 0 0 chr10 29153639 29153951 -111162814 + AluSx SINE Alu 1 312 0 1603 159 36 0 chr10 29154009 29154261 -111162504 + AluJo SINE Alu 13 273 -39 2318 98 0 3 chr10 29155053 29155350 -111161415 - AluSx SINE Alu -16 296 1 1952 147 0 16 chr10 29155607 29155914 -111160851 + AluSx SINE Alu 1 302 -10 35 71 0 0 chr10 29156515 29156585 -111160180 + AT_rich Low_complexity Low_complexity 1 70 0 333 308 173 0 chr10 29157010 29157166 -111159599 - MER5A DNA MER1_type 0 189 7 1084 175 28 5 chr10 29157166 29157383 -111159382 + L1MC/D LINE L1 4523 4744 -1402 577 250 78 0 chr10 29157506 29157698 -111159067 + L1MC/D LINE L1 5574 5780 -2028 965 249 19 83 chr10 29157699 29158060 -111158705 - MER46C DNA MER2_type 0 338 1 1796 185 0 13 chr10 29158219 29158533 -111158232 + AluSx SINE Alu 1 310 -2 2115 137 0 3 chr10 29159143 29159456 -111157309 - AluSx SINE Alu 0 312 1 1747 160 3 32 chr10 29160205 29160518 -111156247 + AluJb SINE Alu 1 304 -8 1843 144 0 47 chr10 29160671 29160991 -111155774 + AluJo SINE Alu 7 311 -1 257 311 9 9 chr10 29161200 29161306 -111155459 + L1MC/D LINE L1 5739 5844 -1964 2278 103 0 0 chr10 29161332 29161624 -111155141 + AluSx SINE Alu 1 292 -20 694 164 0 25 chr10 29161657 29161779 -111154986 - AluSg/x SINE Alu -10 299 181 468 154 0 0 chr10 29161800 29161865 -111154900 - AluS SINE Alu -246 66 2 22 0 0 0 chr10 29162212 29162234 -111154531 + AT_rich Low_complexity Low_complexity 1 22 0 944 158 19 0 chr10 29162733 29162891 -111153874 - L1PA16 LINE L1 -2 6164 6004 336 64 0 0 chr10 29163033 29163080 -111153685 + (CA)n Simple_repeat Simple_repeat 2 48 0 1421 100 28 104 chr10 29163136 29163217 -111153548 - MER30 DNA MER1_type 0 230 144 1981 121 0 57 chr10 29163217 29163548 -111153217 - AluSx SINE Alu 0 312 1 1421 100 28 104 chr10 29163548 29163715 -111153050 - MER30 DNA MER1_type -86 144 1 207 0 0 0 chr10 29164287 29164310 -111152455 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2050 113 3 3 chr10 29164312 29164595 -111152170 - AluSx SINE Alu -29 283 1 400 220 9 46 chr10 29164650 29164759 -111152006 - MER5B DNA MER1_type -68 110 6 2124 112 0 10 chr10 29164877 29165173 -111151592 + AluSg SINE Alu 1 293 -17 351 0 0 0 chr10 29165375 29165414 -111151351 + (TA)n Simple_repeat Simple_repeat 2 40 0 2354 88 0 10 chr10 29165414 29165720 -111151045 - AluSx SINE Alu -8 304 2 375 110 0 18 chr10 29165905 29166160 -111150605 + AluSx SINE Alu 1 298 -4 2238 117 0 0 chr10 29167115 29167413 -111149352 + AluSx SINE Alu 2 299 -13 2138 139 0 0 chr10 29167834 29168136 -111148629 + AluSx SINE Alu 1 302 -10 240 86 29 0 chr10 29168754 29168789 -111147976 + U2 snRNA snRNA 1 36 -152 453 69 17 0 chr10 29168857 29168915 -111147850 - U7 snRNA snRNA -3 60 2 2228 116 7 0 chr10 29168925 29169226 -111147539 - AluSx SINE Alu -9 303 1 27 73 0 0 chr10 29169522 29169577 -111147188 + AT_rich Low_complexity Low_complexity 1 55 0 2344 100 3 0 chr10 29169744 29170045 -111146720 + AluSx SINE Alu 1 302 -10 1478 171 47 7 chr10 29170052 29170327 -111146438 + AluJb SINE Alu 6 291 -21 2361 81 3 13 chr10 29170358 29170666 -111146099 + AluSp SINE Alu 1 305 -8 21 0 0 0 chr10 29171089 29171110 -111145655 + AT_rich Low_complexity Low_complexity 1 21 0 2284 108 0 0 chr10 29171249 29171556 -111145209 + AluSx SINE Alu 1 307 -5 1936 133 7 10 chr10 29172430 29172731 -111144034 + AluJb SINE Alu 1 300 -12 256 269 86 47 chr10 29172760 29172994 -111143771 + L1ME4a LINE L1 5704 5946 -175 2193 110 13 0 chr10 29173205 29173505 -111143260 + AluSx SINE Alu 1 304 -8 2189 113 20 0 chr10 29174221 29174514 -111142251 - AluSq SINE Alu -14 299 1 2063 50 25 109 chr10 29174526 29174876 -111141889 - AluY SINE Alu 0 311 1 2167 105 3 0 chr10 29175515 29175809 -111140956 + AluSp SINE Alu 1 295 -18 427 249 144 22 chr10 29175893 29176137 -111140628 + L1MDa LINE L1 1552 1867 -4730 22 0 0 0 chr10 29176191 29176213 -111140552 + AT_rich Low_complexity Low_complexity 1 22 0 2213 85 0 3 chr10 29176337 29176647 -111140118 - AluSx SINE Alu 0 309 1 297 230 48 26 chr10 29177825 29177913 -111138852 + MIR SINE MIR 30 117 -91 807 142 7 47 chr10 29178186 29178334 -111138431 + FLAM_C SINE Alu 2 143 0 23 0 0 0 chr10 29179311 29179334 -111137431 + AT_rich Low_complexity Low_complexity 1 23 0 282 56 0 0 chr10 29179692 29179728 -111137037 + (CA)n Simple_repeat Simple_repeat 1 36 0 362 297 109 11 chr10 29180154 29180329 -111136436 + MIR SINE MIR 16 207 -55 841 204 0 25 chr10 29181700 29181862 -111134903 + FRAM SINE Alu 1 158 -18 784 118 0 0 chr10 29188803 29188905 -111127860 + AluSg/x SINE Alu 155 256 -54 27 29 0 0 chr10 29189162 29189196 -111127569 + GC_rich Low_complexity Low_complexity 1 34 0 2261 80 35 0 chr10 29189678 29189965 -111126800 + AluSc SINE Alu 1 297 -12 234 91 0 0 chr10 29190438 29190471 -111126294 + (CA)n Simple_repeat Simple_repeat 1 33 0 2032 83 0 0 chr10 29190514 29190767 -111125998 - AluSc SINE Alu -56 253 1 1783 105 0 4 chr10 29190881 29191120 -111125645 - L1PA7 LINE L1 0 6154 5917 5890 64 18 0 chr10 29191121 29191883 -111124882 + L1P LINE L1 3984 4759 -1387 21 89 0 0 chr10 29192081 29192137 -111124628 + AT_rich Low_complexity Low_complexity 1 56 0 23 33 0 0 chr10 29192279 29192309 -111124456 + AT_rich Low_complexity Low_complexity 1 30 0 243 133 0 0 chr10 29192408 29192453 -111124312 - Alu SINE Alu -6 297 253 1849 128 0 54 chr10 29192591 29192887 -111123878 + AluSx SINE Alu 1 280 -32 4491 237 60 91 chr10 29192908 29194631 -111122134 + pTR5 LTR ERV1 769 2438 0 2312 73 7 7 chr10 29196870 29197172 -111119593 - AluSg SINE Alu -8 302 1 1562 249 148 24 chr10 29197748 29198446 -111118319 - MER20B DNA MER1_type 0 784 1 183 172 0 0 chr10 29199986 29200015 -111116750 + MIR SINE MIR 94 122 -86 24 67 0 0 chr10 29200104 29200149 -111116616 + AT_rich Low_complexity Low_complexity 1 45 0 273 163 0 0 chr10 29200238 29200287 -111116478 + (TATATG)n Simple_repeat Simple_repeat 5 53 0 704 165 119 0 chr10 29200288 29200397 -111116368 - FLAM_C SINE Alu -11 122 1 240 167 21 21 chr10 29200578 29200626 -111116139 + L3 LINE CR1 1354 1401 -176 203 161 0 0 chr10 29200819 29200850 -111115915 + (TATATG)n Simple_repeat Simple_repeat 4 34 0 1991 125 7 3 chr10 29201165 29201461 -111115304 - AluSq SINE Alu -16 297 1 243 133 0 0 chr10 29201599 29201644 -111115121 + Alu SINE Alu 253 297 -6 23 33 0 0 chr10 29201742 29201772 -111114993 + AT_rich Low_complexity Low_complexity 1 30 0 1773 105 0 12 chr10 29202562 29202810 -111113955 + AluSg SINE Alu 31 275 -35 351 44 0 0 chr10 29202811 29202856 -111113909 + (TC)n Simple_repeat Simple_repeat 2 46 0 213 216 0 0 chr10 29202856 29202893 -111113872 + (TATG)n Simple_repeat Simple_repeat 3 39 0 1451 208 7 11 chr10 29203119 29203436 -111113329 - AluJo SINE Alu 0 316 1 297 271 37 19 chr10 29205072 29205179 -111111586 + MIR3 SINE MIR 97 205 -3 1697 151 47 7 chr10 29205363 29205483 -111111282 + AluJo SINE Alu 1 115 -197 219 114 0 0 chr10 29205483 29205518 -111111247 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1697 151 47 7 chr10 29205518 29205675 -111111090 + AluJo SINE Alu 115 289 -23 1030 160 0 43 chr10 29205942 29206129 -111110636 - AluSx SINE Alu 0 312 134 264 290 14 0 chr10 29206467 29206536 -111110229 - L2 LINE L2 0 3272 3203 1987 192 58 7 chr10 29206595 29207011 -111109754 - MLT1D LTR MaLR -12 493 57 4919 214 30 22 chr10 29207012 29208828 -111107937 - L1MB4 LINE L1 -91 6089 4289 186 103 0 0 chr10 29208828 29208857 -111107908 + (TG)n Simple_repeat Simple_repeat 2 30 0 4919 214 30 22 chr10 29208857 29209037 -111107728 - L1MB4 LINE L1 -1891 4289 4112 2001 134 0 32 chr10 29209037 29209351 -111107414 - AluSx SINE Alu -8 304 1 4919 214 30 22 chr10 29209351 29209464 -111107301 - L1MB4 LINE L1 -2068 4112 3969 2138 134 0 0 chr10 29209464 29209769 -111106996 - AluSx SINE Alu -7 305 1 6840 230 56 27 chr10 29210053 29212706 -111104059 - L1ME1 LINE L1 -303 6257 3523 5511 161 23 20 chr10 29212829 29214685 -111102080 + L1PA13 LINE L1 4248 6148 -15 604 171 0 0 chr10 29214688 29214776 -111101989 - AluSx SINE Alu -182 130 43 2657 276 50 13 chr10 29214788 29216411 -111100354 - L1ME1 LINE L1 -3114 3426 1732 2053 122 0 42 chr10 29216952 29217264 -111099501 - AluSx SINE Alu -13 299 1 1959 136 11 0 chr10 29217798 29218098 -111098667 - AluSx SINE Alu 0 303 1 2888 257 47 17 chr10 29219528 29220017 -111096748 - L1ME1 LINE L1 -5016 1524 1051 2097 132 3 0 chr10 29220017 29220313 -111096452 - AluSx SINE Alu -15 297 1 2888 257 47 17 chr10 29220313 29221125 -111095640 - L1ME1 LINE L1 -5489 1051 22 22 0 0 0 chr10 29221846 29221868 -111094897 + AT_rich Low_complexity Low_complexity 1 22 0 227 296 93 81 chr10 29222051 29222298 -111094467 - L3 LINE CR1 -263 1314 1065 183 309 225 40 chr10 29222490 29222814 -111093951 + L2 LINE L2 298 681 -2633 260 260 208 13 chr10 29223017 29223171 -111093594 - L2 LINE L2 0 3313 3130 182 244 0 0 chr10 29223402 29223447 -111093318 + L2 LINE L2 3224 3268 -4 378 246 276 0 chr10 29223466 29223600 -111093165 - MIR SINE MIR -5 257 87 199 250 108 75 chr10 29223651 29223694 -111093071 + MIR SINE MIR 69 109 -153 1944 150 0 4 chr10 29223694 29223974 -111092791 - AluSx SINE Alu -33 279 1 199 250 108 75 chr10 29223974 29224050 -111092715 + MIR SINE MIR 109 192 -70 965 249 68 31 chr10 29224059 29224380 -111092385 - MER46C DNA MER2_type -5 333 1 386 278 87 8 chr10 29224503 29224608 -111092157 + MIR SINE MIR 103 221 -41 2276 95 0 0 chr10 29224608 29224903 -111091862 + AluSg SINE Alu 1 295 -15 386 278 87 8 chr10 29224903 29224923 -111091842 + MIR SINE MIR 221 238 -24 21 0 0 0 chr10 29224954 29224975 -111091790 + AT_rich Low_complexity Low_complexity 1 21 0 910 196 9 85 chr10 29225490 29225714 -111091051 + MER3 DNA MER1_type 3 209 0 1676 158 14 45 chr10 29225833 29226149 -111090616 - AluJo SINE Alu 0 307 1 299 369 89 13 chr10 29226718 29226954 -111089811 + MIR SINE MIR 3 256 -6 550 120 22 0 chr10 29227246 29227338 -111089427 + L1MA7 LINE L1 6196 6289 -2 2391 88 0 7 chr10 29227348 29227653 -111089112 + AluSq SINE Alu 1 303 -10 21 0 0 0 chr10 29227874 29227895 -111088870 + AT_rich Low_complexity Low_complexity 1 21 0 494 200 70 26 chr10 29228216 29228331 -111088434 - MER99 DNA DNA -707 121 2 471 113 0 0 chr10 29228671 29228742 -111088023 + (TCTCC)n Simple_repeat Simple_repeat 3 73 0 569 183 11 0 chr10 29228753 29228846 -111087919 - AluJ/FLAM SINE Alu -215 97 4 601 266 73 66 chr10 29228980 29229239 -111087526 + MIR SINE MIR 2 262 0 1764 107 19 8 chr10 29231162 29231451 -111085314 + AluSc SINE Alu 24 309 0 405 86 0 0 chr10 29232467 29232525 -111084240 + (CA)n Simple_repeat Simple_repeat 2 59 0 10199 33 11 128 chr10 29233174 29234701 -111082064 - SVA Other Other 0 1386 38 279 0 0 0 chr10 29234706 29234737 -111082028 + (GGGAGA)n Simple_repeat Simple_repeat 1 31 0 186 184 40 92 chr10 29235290 29235366 -111081399 - L2 LINE L2 0 3313 3242 207 0 0 0 chr10 29236066 29236089 -111080676 + (CATATA)n Simple_repeat Simple_repeat 2 24 0 680 256 92 22 chr10 29236098 29236415 -111080350 - L1MC4a LINE L1 -1883 5925 5587 41968 40 4 0 chr10 29236468 29242600 -111074165 + L1PA4 LINE L1 7 6162 0 632 189 20 117 chr10 29242609 29242805 -111073960 - MER31-int LTR ERV1 -4122 814 638 285 178 139 40 chr10 29242814 29242915 -111073850 - MIR SINE MIR -34 228 118 22 35 0 0 chr10 29242954 29242983 -111073782 + AT_rich Low_complexity Low_complexity 1 29 0 2483 72 3 0 chr10 29243703 29244007 -111072758 + AluY SINE Alu 1 305 -6 216 0 0 0 chr10 29244433 29244457 -111072308 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 221 224 252 19 chr10 29245534 29245641 -111071124 + MIR SINE MIR 14 145 -117 1908 101 8 0 chr10 29246008 29246266 -111070499 - AluSg SINE Alu -16 294 35 2131 82 4 4 chr10 29246362 29246643 -111070122 - AluY SINE Alu -30 281 1 1864 176 0 0 chr10 29246962 29247264 -111069501 + AluSx SINE Alu 1 302 -10 1062 205 60 3 chr10 29247701 29248003 -111068762 - MER33 DNA MER1_type 0 324 6 2367 67 27 0 chr10 29248824 29249121 -111067644 + AluY SINE Alu 1 305 -6 192 200 0 0 chr10 29249264 29249304 -111067461 + (TA)n Simple_repeat Simple_repeat 1 40 0 776 185 0 0 chr10 29249980 29250115 -111066650 + AluJo SINE Alu 1 135 -177 25 51 0 0 chr10 29250235 29250274 -111066491 + AT_rich Low_complexity Low_complexity 1 39 0 569 202 0 0 chr10 29250725 29250829 -111065936 - U6 snRNA snRNA -2 105 2 2144 96 0 4 chr10 29252528 29252809 -111063956 - AluSc SINE Alu -18 291 12 400 87 54 0 chr10 29252816 29252908 -111063857 + (TA)n Simple_repeat Simple_repeat 2 98 0 508 81 58 29 chr10 29252923 29253097 -111063668 + (TA)n Simple_repeat Simple_repeat 2 180 0 1847 135 38 7 chr10 29253352 29253640 -111063125 + AluSq SINE Alu 7 303 -10 261 335 88 26 chr10 29253674 29253868 -111062897 + MIR SINE MIR 26 231 -31 569 202 0 0 chr10 29255681 29255785 -111060980 + U6 snRNA snRNA 2 105 -2 25 51 0 0 chr10 29256240 29256279 -111060486 + AT_rich Low_complexity Low_complexity 1 39 0 776 185 0 0 chr10 29256399 29256534 -111060231 - AluJo SINE Alu -177 135 1 192 200 0 0 chr10 29257210 29257250 -111059515 + (TA)n Simple_repeat Simple_repeat 1 40 0 2192 84 3 7 chr10 29257392 29257678 -111059087 - AluSx SINE Alu -5 307 23 467 331 76 18 chr10 29257783 29258112 -111058653 - L1M4 LINE L1 -3679 2467 2120 520 183 30 179 chr10 29259394 29259629 -111057136 - L2 LINE L2 -1 3312 3113 836 195 6 24 chr10 29259629 29259793 -111056972 - AluJo SINE Alu -151 161 1 1705 158 39 11 chr10 29259803 29260088 -111056677 - AluJb SINE Alu -19 293 1 204 209 31 194 chr10 29261567 29261696 -111055069 - MIR SINE MIR -87 175 68 2037 146 0 19 chr10 29261781 29262090 -111054675 + AluSx SINE Alu 1 303 -9 1665 143 18 35 chr10 29262550 29262836 -111053929 + AluJo SINE Alu 1 281 -31 317 296 131 30 chr10 29263739 29264034 -111052731 - L1 LINE L1 -1315 4831 4502 25 31 0 0 chr10 29264508 29264540 -111052225 + AT_rich Low_complexity Low_complexity 1 32 0 2152 104 0 16 chr10 29265471 29265780 -111050985 - AluY SINE Alu -7 304 1 803 219 0 24 chr10 29265797 29266005 -111050760 + FRAM SINE Alu 1 196 0 1740 185 30 0 chr10 29266523 29266825 -111049940 + AluJb SINE Alu 1 311 -1 27 62 0 0 chr10 29266832 29266880 -111049885 + AT_rich Low_complexity Low_complexity 1 48 0 189 192 137 0 chr10 29267166 29267239 -111049526 + MIR SINE MIR 131 213 -49 5587 112 16 11 chr10 29267396 29267500 -111049265 - L1PA11 LINE L1 -2 6172 6070 414 0 0 0 chr10 29267500 29267546 -111049219 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 1950 132 0 24 chr10 29267546 29267833 -111048932 - AluSx SINE Alu -28 284 5 5587 112 16 11 chr10 29267833 29268848 -111047917 - L1PA11 LINE L1 -103 6071 5037 214 327 0 0 chr10 29268848 29268900 -111047865 + MIR3 SINE MIR 115 166 -42 247 354 72 11 chr10 29269659 29269840 -111046925 + L2 LINE L2 2181 2372 -942 23 0 0 0 chr10 29270048 29270071 -111046694 + AT_rich Low_complexity Low_complexity 1 23 0 2258 86 3 3 chr10 29270365 29270657 -111046108 - AluY SINE Alu -14 297 6 714 251 76 28 chr10 29270711 29270922 -111045843 + MER58A DNA MER1_type 4 224 0 389 294 95 19 chr10 29271112 29271323 -111045442 + MLT1L LTR MaLR 144 370 -245 2012 122 41 3 chr10 29271349 29271643 -111045122 + AluSg SINE Alu 1 305 -5 1780 138 18 4 chr10 29272254 29272563 -111044202 - AluSx SINE Alu 0 315 3 22 56 0 0 chr10 29272691 29272727 -111044038 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr10 29273104 29273132 -111043633 + AT_rich Low_complexity Low_complexity 1 28 0 1797 168 43 47 chr10 29273558 29273998 -111042767 + Tigger2 DNA MER2_type 1 2718 0 401 109 0 0 chr10 29274049 29274104 -111042661 + FLAM SINE Alu 67 121 -22 357 43 0 0 chr10 29274108 29274155 -111042610 + (CATA)n Simple_repeat Simple_repeat 2 48 0 41 21 0 0 chr10 29274270 29274318 -111042447 + AT_rich Low_complexity Low_complexity 1 48 0 220 244 0 0 chr10 29274587 29274632 -111042133 + (TA)n Simple_repeat Simple_repeat 1 45 0 183 328 109 0 chr10 29275108 29275227 -111041538 + MIR SINE MIR 90 221 -41 828 176 0 0 chr10 29275301 29275437 -111041328 + AluJo SINE Alu 1 136 -176 25 75 0 0 chr10 29275573 29275626 -111041139 + AT_rich Low_complexity Low_complexity 1 53 0 573 200 0 0 chr10 29276064 29276169 -111040596 - U6 snRNA snRNA -2 105 1 708 220 11 21 chr10 29278023 29278214 -111038551 + MSTB2 LTR MaLR 263 451 -6 2603 162 23 2 chr10 29278214 29278696 -111038069 + L1MC1 LINE L1 5842 6333 0 582 264 96 30 chr10 29278699 29279252 -111037513 + L1MEd LINE L1 947 1579 -4731 231 61 0 0 chr10 29279284 29279317 -111037448 + (TG)n Simple_repeat Simple_repeat 2 34 0 667 208 0 8 chr10 29279605 29279730 -111037035 + FLAM_C SINE Alu 1 124 -19 872 38 19 0 chr10 29279997 29280102 -111036663 - AluY SINE Alu -11 300 194 617 350 85 27 chr10 29280106 29280307 -111036458 - L1M4 LINE L1 -3353 2793 2605 2083 94 10 7 chr10 29280307 29280595 -111036170 - AluSx SINE Alu -1 311 23 617 350 85 27 chr10 29280595 29281030 -111035735 - L1M4 LINE L1 -3541 2605 2120 319 318 29 69 chr10 29281437 29281610 -111035155 - HAL1 LINE L1 -737 1770 1605 458 177 28 222 chr10 29282313 29282561 -111034204 - L2 LINE L2 -1 3312 3113 859 189 6 24 chr10 29282561 29282725 -111034040 - AluJo SINE Alu -151 161 1 1705 158 39 11 chr10 29282735 29283020 -111033745 - AluJb SINE Alu -19 293 1 204 209 31 194 chr10 29284499 29284628 -111032137 - MIR SINE MIR -87 175 68 2037 146 0 19 chr10 29284713 29285022 -111031743 + AluSx SINE Alu 1 303 -9 1665 143 18 35 chr10 29285482 29285768 -111030997 + AluJo SINE Alu 1 281 -31 307 314 171 43 chr10 29286671 29286951 -111029814 - L1 LINE L1 -1315 4831 4516 25 31 0 0 chr10 29287439 29287471 -111029294 + AT_rich Low_complexity Low_complexity 1 32 0 2152 104 0 16 chr10 29288402 29288711 -111028054 - AluY SINE Alu -7 304 1 803 219 0 24 chr10 29288728 29288939 -111027826 + FRAM SINE Alu 1 199 0 1740 185 30 0 chr10 29289457 29289759 -111027006 + AluJb SINE Alu 1 311 -1 27 62 0 0 chr10 29289766 29289814 -111026951 + AT_rich Low_complexity Low_complexity 1 48 0 189 192 137 0 chr10 29290100 29290173 -111026592 + MIR SINE MIR 131 213 -49 5618 111 16 11 chr10 29290330 29290434 -111026331 - L1PA11 LINE L1 -2 6172 6070 486 0 0 0 chr10 29290434 29290488 -111026277 + (TTTA)n Simple_repeat Simple_repeat 2 55 0 1960 129 0 24 chr10 29290488 29290775 -111025990 - AluSx SINE Alu -28 284 5 5618 111 16 11 chr10 29290775 29291790 -111024975 - L1PA11 LINE L1 -103 6071 5037 204 346 0 0 chr10 29291790 29291842 -111024923 + MIR3 SINE MIR 115 166 -42 247 354 72 11 chr10 29292602 29292783 -111023982 + L2 LINE L2 2181 2372 -942 23 0 0 0 chr10 29292991 29293014 -111023751 + AT_rich Low_complexity Low_complexity 1 23 0 2245 89 3 3 chr10 29293306 29293598 -111023167 - AluY SINE Alu -14 297 6 714 251 76 28 chr10 29293652 29293863 -111022902 + MER58A DNA MER1_type 4 224 0 374 299 95 19 chr10 29294053 29294264 -111022501 + MLT1L LTR MaLR 144 370 -245 2012 122 41 3 chr10 29294290 29294584 -111022181 + AluSg SINE Alu 1 305 -5 1780 138 18 4 chr10 29295195 29295504 -111021261 - AluSx SINE Alu 0 315 3 22 56 0 0 chr10 29295632 29295668 -111021097 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr10 29296045 29296073 -111020692 + AT_rich Low_complexity Low_complexity 1 28 0 1797 168 43 47 chr10 29296499 29296939 -111019826 + Tigger2 DNA MER2_type 1 2718 0 401 109 0 0 chr10 29296990 29297045 -111019720 + FLAM SINE Alu 67 121 -22 360 59 0 0 chr10 29297049 29297100 -111019665 + (CATA)n Simple_repeat Simple_repeat 2 52 0 41 21 0 0 chr10 29297215 29297263 -111019502 + AT_rich Low_complexity Low_complexity 1 48 0 220 244 0 0 chr10 29297532 29297577 -111019188 + (TA)n Simple_repeat Simple_repeat 2 46 0 183 328 109 0 chr10 29298053 29298172 -111018593 + MIR SINE MIR 90 221 -41 828 176 0 0 chr10 29298246 29298382 -111018383 + AluJo SINE Alu 1 136 -176 25 75 0 0 chr10 29298518 29298571 -111018194 + AT_rich Low_complexity Low_complexity 1 53 0 573 200 0 0 chr10 29299009 29299114 -111017651 - U6 snRNA snRNA -2 105 1 2248 114 0 3 chr10 29301136 29301443 -111015322 - AluSq SINE Alu -7 306 1 2183 136 0 0 chr10 29301695 29301996 -111014769 - AluSx SINE Alu -10 302 2 209 244 93 35 chr10 29302682 29302768 -111013997 + L2 LINE L2 3175 3265 -48 22 70 0 0 chr10 29303680 29303723 -111013042 + AT_rich Low_complexity Low_complexity 1 43 0 252 321 19 0 chr10 29303778 29303884 -111012881 - MER102a DNA MER1_type -1 329 222 685 251 101 64 chr10 29304936 29305192 -111011573 + MIR SINE MIR 2 261 -1 438 272 11 33 chr10 29305284 29305468 -111011297 + MER104 DNA MER2_type 1 180 0 23 68 0 0 chr10 29306272 29306316 -111010449 + AT_rich Low_complexity Low_complexity 1 44 0 302 337 79 28 chr10 29306718 29306896 -111009869 - L1ME LINE L1 -444 5677 5491 21 57 0 0 chr10 29307341 29307376 -111009389 + AT_rich Low_complexity Low_complexity 1 35 0 1695 245 50 20 chr10 29307433 29308036 -111008729 - L1ME LINE L1 -1054 5092 4472 1161 148 32 4 chr10 29308427 29308662 -111008103 - L1ME LINE L1 -436 5730 5487 2292 91 6 15 chr10 29309603 29309944 -111006821 - L1PA12 LINE L1 -1 6167 5830 27 29 0 0 chr10 29310106 29310140 -111006625 + AT_rich Low_complexity Low_complexity 1 34 0 1035 93 35 0 chr10 29310707 29310879 -111005886 + CT-rich Low_complexity Low_complexity 3 180 0 2240 118 0 0 chr10 29311644 29312121 -111004644 - AluSx SINE Alu 0 477 1 231 298 10 10 chr10 29312237 29312341 -111004424 - MER113 DNA MER1_type? -313 208 105 1051 145 22 57 chr10 29315185 29315203 -111001562 - LTR49-int LTR ERV1 -4741 1590 1573 5193 110 18 5 chr10 29315203 29316018 -111000747 - L1MA1 LINE L1 0 6302 5477 1051 145 22 57 chr10 29316018 29316055 -111000710 - LTR49-int LTR ERV1 -4758 1573 1536 2026 136 3 3 chr10 29316055 29316350 -111000415 - AluSg SINE Alu -15 295 1 1051 145 22 57 chr10 29316350 29316520 -111000245 - LTR49-int LTR ERV1 -4795 1536 1372 4757 177 29 40 chr10 29316615 29316644 -111000121 - LTR49-int LTR ERV1 -4494 1452 1424 1026 187 10 5 chr10 29316644 29316847 -110999918 + L1PA16 LINE L1 5959 6162 -4 4757 177 29 40 chr10 29316847 29317904 -110998861 - LTR49-int LTR ERV1 -4522 1424 363 1721 178 43 7 chr10 29317939 29318349 -110998416 - LTR49-int LTR ERV1 -4619 1327 1 1314 215 48 11 chr10 29318353 29318707 -110998058 - LTR49 LTR ERV1 -2 593 227 2704 62 0 0 chr10 29319164 29319505 -110997260 - L1PA7 LINE L1 -13 6141 5801 28 29 0 0 chr10 29319746 29319781 -110996984 + AT_rich Low_complexity Low_complexity 1 35 0 317 196 0 28 chr10 29319860 29319967 -110996798 + (CA)n Simple_repeat Simple_repeat 1 104 0 252 184 0 0 chr10 29320002 29320051 -110996714 + (CA)n Simple_repeat Simple_repeat 2 50 0 261 143 0 0 chr10 29321313 29321355 -110995410 - MER41-int LTR ERV1 -4679 1267 1226 253 252 29 0 chr10 29321521 29321624 -110995141 + (TA)n Simple_repeat Simple_repeat 1 106 0 226 246 0 0 chr10 29322393 29322450 -110994315 + (TA)n Simple_repeat Simple_repeat 1 57 0 441 66 0 0 chr10 29322514 29322575 -110994190 + (TCTA)n Simple_repeat Simple_repeat 3 63 0 308 311 8 0 chr10 29322576 29322708 -110994057 + (TA)n Simple_repeat Simple_repeat 1 133 0 1794 109 4 15 chr10 29323311 29323577 -110993188 + AluSx SINE Alu 41 303 -9 237 230 0 0 chr10 29324387 29324461 -110992304 + (TA)n Simple_repeat Simple_repeat 1 74 0 195 42 0 0 chr10 29324486 29324510 -110992255 + (CA)n Simple_repeat Simple_repeat 1 24 0 189 74 0 0 chr10 29324698 29324725 -110992040 + (TATG)n Simple_repeat Simple_repeat 4 30 0 198 156 0 0 chr10 29324972 29325017 -110991748 + (TA)n Simple_repeat Simple_repeat 2 46 0 898 283 46 38 chr10 29325523 29326021 -110990744 + MLT1J LTR MaLR 1 502 -9 1110 209 35 4 chr10 29326984 29327238 -110989527 - MER31B LTR ERV1 -203 263 2 578 160 10 0 chr10 29327341 29327441 -110989324 - MLT1E1 LTR MaLR -31 623 523 25 0 0 0 chr10 29327845 29327870 -110988895 + AT_rich Low_complexity Low_complexity 1 25 0 2101 169 23 21 chr10 29328926 29329357 -110987408 - L1MB7 LINE L1 -67 6117 5686 1132 207 114 4 chr10 29331354 29331625 -110985140 - AluJb SINE Alu 0 302 2 1844 124 58 7 chr10 29331639 29331913 -110984852 - AluSg1 SINE Alu -21 288 1 223 354 0 0 chr10 29331985 29332064 -110984701 + CT-rich Low_complexity Low_complexity 3 81 0 26 30 0 0 chr10 29332209 29332242 -110984523 + AT_rich Low_complexity Low_complexity 1 33 0 25 31 0 0 chr10 29332403 29332435 -110984330 + AT_rich Low_complexity Low_complexity 1 32 0 2189 121 3 6 chr10 29332435 29332748 -110984017 - AluSx SINE Alu 0 312 1 192 77 0 0 chr10 29333092 29333118 -110983647 + (TTTTC)n Simple_repeat Simple_repeat 4 29 0 758 186 0 0 chr10 29333391 29333515 -110983250 + FLAM_C SINE Alu 1 124 -19 1553 180 10 20 chr10 29333530 29333824 -110982941 + AluJo SINE Alu 1 291 -21 374 265 37 34 chr10 29334665 29334808 -110981957 - MLT1K LTR MaLR -23 565 395 192 40 0 0 chr10 29334808 29334833 -110981932 + (T)n Simple_repeat Simple_repeat 1 25 0 251 342 52 19 chr10 29335032 29335187 -110981578 - MLT1K LTR MaLR -382 206 47 2167 125 50 36 chr10 29335265 29335624 -110981141 + THE1B LTR MaLR 1 364 0 2433 76 0 0 chr10 29336805 29337095 -110979670 - AluSc SINE Alu -19 290 1 931 67 0 8 chr10 29337095 29337215 -110979550 - AluSx SINE Alu 0 312 194 839 85 0 0 chr10 29337219 29337325 -110979440 - AluSx SINE Alu -175 138 33 1738 156 17 10 chr10 29337596 29337884 -110978881 + AluJb SINE Alu 5 294 -18 1976 129 50 0 chr10 29338158 29338438 -110978327 - AluSx SINE Alu -18 294 1 1172 216 6 3 chr10 29338703 29338735 -110978030 + L1MB1 LINE L1 5921 5951 -238 2090 121 0 0 chr10 29338735 29339044 -110977721 + AluSx SINE Alu 1 309 0 1172 216 6 3 chr10 29339044 29339255 -110977510 + L1MB1 LINE L1 5951 6155 -34 998 164 0 62 chr10 29340260 29340437 -110976328 - FRAM SINE Alu 0 166 1 2133 109 3 7 chr10 29341503 29341797 -110974968 - AluSc SINE Alu -14 295 3 802 161 0 86 chr10 29342238 29342412 -110974353 + L1MA10 LINE L1 6137 6295 -39 2184 114 7 0 chr10 29342430 29342729 -110974036 - AluSx SINE Alu -11 301 1 5588 118 30 11 chr10 29342735 29343596 -110973169 - L1PA15 LINE L1 0 6165 5288 2541 126 19 0 chr10 29343596 29343968 -110972797 - L1PA16 LINE L1 -8 6158 5780 233 188 0 0 chr10 29343968 29344011 -110972754 + L1MA10 LINE L1 6282 6324 -10 225 0 0 0 chr10 29344053 29344078 -110972687 + (A)n Simple_repeat Simple_repeat 1 25 0 263 250 15 0 chr10 29345994 29346062 -110970703 + (TG)n Simple_repeat Simple_repeat 2 70 0 1595 111 4 8 chr10 29346611 29346897 -110969868 - AluSq SINE Alu 0 313 77 477 248 14 86 chr10 29347756 29347966 -110968799 + L2 LINE L2 3119 3313 0 2352 122 73 20 chr10 29348581 29348925 -110967840 + THE1B LTR MaLR 1 362 -2 1062 280 49 107 chr10 29349543 29349632 -110967133 + L1MEc LINE L1 20 113 -6283 1867 129 96 0 chr10 29349632 29349912 -110966853 + AluJb SINE Alu 1 307 -5 1062 280 49 107 chr10 29349912 29350737 -110966028 + L1MEc LINE L1 113 881 -5515 1568 238 70 12 chr10 29350741 29351140 -110965625 + MLT1F LTR MaLR 7 428 -114 1257 90 7 0 chr10 29351144 29351299 -110965466 + AluSx SINE Alu 1 156 -156 2108 89 0 38 chr10 29351300 29351591 -110965174 + AluSx SINE Alu 21 300 -12 623 166 182 53 chr10 29351832 29352079 -110964686 + L1MC5 LINE L1 7319 7597 -364 4207 149 23 17 chr10 29352090 29352794 -110963971 - L1MC1 LINE L1 0 6333 5626 823 363 20 25 chr10 29353058 29353501 -110963264 - L1M3a LINE L1 -5503 452 12 3486 152 90 4 chr10 29353507 29354599 -110962166 - L1MCa LINE L1 -4166 2478 1193 2347 174 4 123 chr10 29354601 29355137 -110961628 - MER70A LTR ERVL 0 472 1 15761 150 26 40 chr10 29355160 29356452 -110960313 - MER70A-int LTR ERVL -10 5013 3705 2603 101 28 17 chr10 29356452 29356809 -110959956 + THE1B LTR MaLR 1 361 -3 15761 150 26 40 chr10 29356809 29358315 -110958450 - MER70A-int LTR ERVL -1318 3705 2252 619 168 10 0 chr10 29358307 29358408 -110958357 - MER70-int LTR ERVL -1678 3345 3244 * 665 280 86 106 chr10 29358442 29358561 -110958204 - L1MCa LINE L1 -5813 729 609 1808 119 8 0 chr10 29358561 29358812 -110957953 + AluSx SINE Alu 57 309 -3 665 280 86 106 chr10 29358812 29359168 -110957597 - L1MCa LINE L1 -5933 609 272 2219 79 7 20 chr10 29359168 29359471 -110957294 - AluSx SINE Alu -13 299 1 665 280 86 106 chr10 29359471 29359738 -110957027 - L1MCa LINE L1 -6270 272 1 1848 140 13 23 chr10 29360094 29360402 -110956363 + AluJo SINE Alu 6 310 -2 1143 244 88 34 chr10 29360439 29360939 -110955826 + L1ME4a LINE L1 4696 5222 -924 31 68 0 0 chr10 29361136 29361195 -110955570 + AT_rich Low_complexity Low_complexity 1 59 0 1812 116 8 4 chr10 29361242 29361500 -110955265 - AluSx SINE Alu -14 298 40 195 42 0 0 chr10 29363111 29363135 -110953630 + (A)n Simple_repeat Simple_repeat 1 24 0 729 191 0 107 chr10 29363968 29364136 -110952629 - Tigger3(Golem) DNA MER2_type -2876 153 4 377 287 135 33 chr10 29364147 29364509 -110952256 + L1ME4a LINE L1 5384 5782 -339 356 243 39 88 chr10 29364575 29364756 -110952009 + L1ME4a LINE L1 5923 6094 -27 400 157 0 60 chr10 29364994 29365077 -110951688 - Tigger3b DNA MER2_type -380 852 775 203 55 109 55 chr10 29365081 29365136 -110951629 + (TTAAA)n Simple_repeat Simple_repeat 3 60 0 1038 78 30 104 chr10 29365140 29365358 -110951407 - Tigger3b DNA MER2_type -2241 788 592 2361 68 0 10 chr10 29365358 29365685 -110951080 + AluY SINE Alu 1 311 0 1038 78 30 104 chr10 29365685 29365735 -110951030 - Tigger3b DNA MER2_type -2437 592 540 1185 128 11 16 chr10 29365735 29365922 -110950843 + AluSg/x SINE Alu 120 305 -5 2039 119 92 0 chr10 29365923 29366259 -110950506 - Tigger3b DNA MER2_type -703 528 162 * 3796 135 25 8 chr10 29366257 29366870 -110949895 + Tigger3b DNA MER2_type 609 1231 0 2098 95 29 41 chr10 29368358 29368700 -110948065 - AluSx SINE Alu 0 338 1 371 233 12 12 chr10 29368926 29369012 -110947753 + Tigger7 DNA MER2_type 2401 2486 -1 2393 85 0 0 chr10 29369326 29369621 -110947144 + AluSx SINE Alu 1 295 -17 376 324 70 14 chr10 29370559 29370701 -110946064 - MER5B DNA MER1_type -5 173 24 250 289 51 51 chr10 29371167 29371323 -110945442 + L1MB4 LINE L1 5 160 -6382 1390 77 0 0 chr10 29371530 29371700 -110945065 + AluY SINE Alu 129 298 -13 1814 166 3 17 chr10 29371747 29372049 -110944716 + AluJo SINE Alu 11 308 -4 8751 230 49 15 chr10 29372052 29372510 -110944255 + L1MB4 LINE L1 2551 2992 -3652 2110 167 0 0 chr10 29372510 29372822 -110943943 + AluSx SINE Alu 1 312 0 8751 230 49 15 chr10 29372822 29373369 -110943396 + L1MB4 LINE L1 2992 3519 -3125 1652 229 80 0 chr10 29373369 29373705 -110943060 - MLT1A1 LTR MaLR 0 365 3 8751 230 49 15 chr10 29373705 29375284 -110941481 + L1MB4 LINE L1 3519 5223 -1421 1545 191 37 39 chr10 29375277 29375659 -110941106 + L1MB4 LINE L1 6295 6675 -3 * 1395 174 0 0 chr10 29376130 29376349 -110940416 - AluJb SINE Alu -93 219 1 838 305 72 22 chr10 29378647 29379228 -110937537 - L1MC4a LINE L1 -23 6098 5490 1342 175 68 115 chr10 29379557 29379940 -110936825 + MLT1A1 LTR MaLR 1 365 0 23 0 0 0 chr10 29379952 29379975 -110936790 + AT_rich Low_complexity Low_complexity 1 23 0 567 313 88 17 chr10 29380110 29380455 -110936310 + MLT1J2 LTR MaLR 65 444 -2 2179 124 0 3 chr10 29380979 29381278 -110935487 + AluSx SINE Alu 1 298 -14 1166 238 75 14 chr10 29381452 29381687 -110935078 - MER114 LTR ERV -5 643 424 1821 156 11 0 chr10 29381687 29381969 -110934796 + AluSq SINE Alu 1 285 -28 1166 238 75 14 chr10 29381969 29382162 -110934603 - MER114 LTR ERV -224 424 189 37407 43 4 1 chr10 29382171 29388291 -110928474 + L1PA4 LINE L1 11 6155 0 1417 207 12 61 chr10 29388304 29388714 -110928051 + MLT2C1 LTR ERVL 1 390 -7 249 57 0 0 chr10 29388715 29388750 -110928015 + (TA)n Simple_repeat Simple_repeat 2 36 0 5687 246 50 20 chr10 29388771 29390904 -110925861 + ERVL-C1-C1 LTR ERVL 25 2292 -3472 12893 186 66 24 chr10 29390906 29391260 -110925505 + ERVL-C1-C1 LTR ERVL 2465 2803 -2961 774 164 0 16 chr10 29391260 29391388 -110925377 + AluJo/FLAM SINE Alu 1 126 -176 1974 125 7 10 chr10 29391391 29391688 -110925077 + AluSx SINE Alu 1 296 -16 12893 186 66 24 chr10 29391688 29391886 -110924879 + ERVL-C1-C1 LTR ERVL 2804 2992 -2772 273 29 0 0 chr10 29391886 29391920 -110924845 + (TTG)n Simple_repeat Simple_repeat 1 34 0 2098 113 7 0 chr10 29391924 29392206 -110924559 - AluSp SINE Alu -29 284 1 12893 186 66 24 chr10 29392206 29394273 -110922492 + ERVL-C1-C1 LTR ERVL 2994 5222 -542 1232 86 48 32 chr10 29394273 29394460 -110922305 + MER30B DNA MER1_type 1 190 0 12893 186 66 24 chr10 29394460 29394643 -110922122 + ERVL-C1-C1 LTR ERVL 5222 5396 -368 550 239 58 0 chr10 29394682 29394837 -110921928 + ERVL-C1-C1 LTR ERVL 5522 5685 -79 9274 29 8 1 chr10 29394843 29396039 -110920726 + L1P LINE L1 2575 3778 -2368 415 110 0 14 chr10 29396052 29396125 -110920640 + ERVL-C1-C1 LTR ERVL 5686 5757 -7 1468 149 13 112 chr10 29396135 29396518 -110920247 + MLT2C1 LTR ERVL 5 349 -48 186 133 0 0 chr10 29396519 29396549 -110920216 + (TCCC)n Simple_repeat Simple_repeat 3 32 0 372 22 0 0 chr10 29396553 29396598 -110920167 + (TG)n Simple_repeat Simple_repeat 2 46 0 376 246 62 15 chr10 29396657 29396852 -110919913 - MER114 LTR ERV -444 204 1 499 228 36 55 chr10 29396932 29397350 -110919415 + L1ME LINE L1 1260 1668 -4716 2995 261 50 16 chr10 29397360 29398593 -110918172 + L1ME LINE L1 3126 4399 -1983 2347 264 63 22 chr10 29398594 29399550 -110917215 + L1ME LINE L1 4455 5457 -925 2140 73 4 0 chr10 29399550 29399809 -110916956 - AluY SINE Alu -17 294 35 2347 264 63 22 chr10 29399809 29399871 -110916894 + L1ME LINE L1 5457 5515 -867 1265 134 40 102 chr10 29399894 29400169 -110916596 + AluJo SINE Alu 39 296 -16 600 206 111 10 chr10 29400172 29400371 -110916394 + L1ME LINE L1 5538 5756 -642 4840 200 62 26 chr10 29400402 29400887 -110915878 + MER45R DNA AcHobo 52 518 -1063 2288 94 7 0 chr10 29400887 29401185 -110915580 + AluSx SINE Alu 1 300 -12 4840 200 62 26 chr10 29401185 29401945 -110914820 + MER45R DNA AcHobo 518 1341 -240 779 193 75 53 chr10 29402110 29402227 -110914538 + L1M4 LINE L1 4143 4256 -1890 195 42 0 0 chr10 29402227 29402251 -110914514 + (CA)n Simple_repeat Simple_repeat 1 24 0 779 193 75 53 chr10 29402251 29402361 -110914404 + L1M4 LINE L1 4256 4375 -1771 227 266 19 39 chr10 29402360 29402514 -110914251 + L1M4 LINE L1 2282 2432 -3714 * 277 232 43 0 chr10 29403573 29403642 -110913123 + L2 LINE L2 3242 3313 0 612 233 16 21 chr10 29403778 29403971 -110912794 - HAL1b LINE L1 -551 797 606 365 238 48 60 chr10 29404053 29404221 -110912544 - HAL1b LINE L1 -872 476 311 315 313 26 26 chr10 29404346 29404461 -110912304 - HAL1b LINE L1 -1163 185 71 1296 157 18 44 chr10 29404795 29405024 -110911741 + AluJo SINE Alu 21 243 -69 537 281 76 25 chr10 29405062 29405300 -110911465 + HAL1 LINE L1 273 522 -1985 211 247 26 0 chr10 29405348 29405425 -110911340 + (TTA)n Simple_repeat Simple_repeat 1 79 0 684 133 0 0 chr10 29405439 29405537 -110911228 - AluJ/FLAM SINE Alu -214 98 1 209 56 0 28 chr10 29405750 29405786 -110910979 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 1475 182 6 20 chr10 29405792 29405898 -110910867 + L1MA4 LINE L1 5963 6069 -231 1240 152 190 8 chr10 29405898 29406161 -110910604 + AluYa5 SINE Alu 1 311 0 1475 182 6 20 chr10 29406161 29406395 -110910370 + L1MA4 LINE L1 6069 6298 -2 332 329 13 58 chr10 29406537 29406692 -110910073 - HAL1 LINE L1 -891 1616 1469 303 242 0 55 chr10 29406684 29406775 -110909990 - L1MC4 LINE L1 -1343 6699 6614 * 702 98 17 75 chr10 29406785 29406959 -110909806 + (TATATG)n Simple_repeat Simple_repeat 5 168 0 311 239 57 34 chr10 29406963 29407051 -110909714 + L1MC4 LINE L1 6614 6703 -1339 291 170 18 74 chr10 29407064 29407549 -110909216 + (CATA)n Simple_repeat Simple_repeat 1 457 0 383 231 61 0 chr10 29407553 29407700 -110909065 + (TA)n Simple_repeat Simple_repeat 2 157 0 701 139 98 0 chr10 29407731 29407853 -110908912 - AluSq/x SINE Alu -178 134 1 2263 94 40 0 chr10 29407897 29408196 -110908569 + AluSq SINE Alu 1 311 -2 894 177 26 151 chr10 29408439 29408498 -110908267 - MLT2B3 LTR ERVL -8 546 481 2068 116 36 13 chr10 29408498 29408800 -110907965 + AluSx SINE Alu 1 309 -3 894 177 26 151 chr10 29408800 29409051 -110907714 - MLT2B3 LTR ERVL -73 481 275 363 44 0 0 chr10 29410253 29410298 -110906467 + (TTCC)n Simple_repeat Simple_repeat 2 46 0 582 163 12 25 chr10 29410376 29410536 -110906229 + CT-rich Low_complexity Low_complexity 4 161 0 912 174 12 8 chr10 29410642 29410890 -110905875 + CT-rich Low_complexity Low_complexity 1 249 0 1457 204 19 41 chr10 29410896 29411215 -110905550 - AluJo SINE Alu 0 312 1 192 313 75 62 chr10 29412137 29412217 -110904548 + L2 LINE L2 3138 3218 -54 852 152 0 41 chr10 29412377 29412522 -110904243 + FLAM_C SINE Alu 1 139 -4 537 350 62 0 chr10 29413637 29413880 -110902885 + MIR SINE MIR 5 262 0 239 289 141 4 chr10 29413972 29414214 -110902551 - L1 LINE L1 -2191 3955 3681 447 246 164 30 chr10 29414412 29414972 -110901793 - L1 LINE L1 -2638 3508 2874 1615 162 3 53 chr10 29415032 29415334 -110901431 - AluJb SINE Alu -25 287 1 357 366 54 9 chr10 29415676 29415900 -110900865 - HAL1 LINE L1 -761 1746 1513 2074 117 14 10 chr10 29415973 29416263 -110900502 - AluSx SINE Alu -21 291 1 6308 128 20 27 chr10 29416275 29417119 -110899646 - L1MA3 LINE L1 0 6305 5456 2074 153 0 13 chr10 29417119 29417432 -110899333 - AluSx SINE Alu -3 309 1 6308 128 20 27 chr10 29417432 29418559 -110898206 - L1MA3 LINE L1 -849 5456 4354 571 101 25 0 chr10 29418567 29418646 -110898119 + AluSg/x SINE Alu 209 289 -23 26 30 0 0 chr10 29419264 29419297 -110897468 + AT_rich Low_complexity Low_complexity 1 33 0 1558 154 47 25 chr10 29419550 29419829 -110896936 + AluJo SINE Alu 5 289 -23 315 49 0 0 chr10 29419830 29419871 -110896894 + (CA)n Simple_repeat Simple_repeat 2 42 0 1335 239 5 46 chr10 29420176 29420590 -110896175 + MLT2C1 LTR ERVL 1 397 0 429 266 43 98 chr10 29420826 29421224 -110895541 - HAL1 LINE L1 -924 1583 1208 342 202 149 90 chr10 29421439 29421627 -110895138 - HAL1 LINE L1 -1493 1014 816 2375 164 45 24 chr10 29421938 29422445 -110894320 - L1MB3 LINE L1 -12 6171 5654 260 250 20 60 chr10 29422746 29422846 -110893919 + MIR SINE MIR 7 102 -160 252 86 0 0 chr10 29423769 29423804 -110892961 + (TG)n Simple_repeat Simple_repeat 2 36 0 199 324 45 63 chr10 29424261 29424372 -110892393 - MIR3 SINE MIR -6 202 94 3885 139 12 145 chr10 29424570 29425611 -110891154 - MER4D LTR ERV1 0 903 1 2097 83 0 4 chr10 29425776 29426066 -110890699 + AluY SINE Alu 36 324 0 1785 133 66 36 chr10 29426068 29426430 -110890335 - THE1C LTR MaLR -2 373 1 210 71 0 0 chr10 29426552 29426580 -110890185 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 371 218 38 16 chr10 29426831 29426961 -110889804 + MIR SINE MIR 41 176 -63 2056 174 31 7 chr10 29427025 29427430 -110889335 - MSTA LTR MaLR 0 428 21 1451 198 47 0 chr10 29427776 29428095 -110888670 + MER58B DNA MER1_type 6 339 -2 813 265 57 5 chr10 29428142 29428353 -110888412 - MIR SINE MIR -10 252 31 3368 67 2 9 chr10 29429200 29429651 -110887114 + LTR7 LTR ERV1 1 448 -2 2779 112 4 32 chr10 29429653 29430125 -110886640 + HERVH LTR ERV1 1 459 -7254 3658 223 19 53 chr10 29430183 29431898 -110884867 + HERVH LTR ERV1 800 2265 -4389 * 17414 70 9 8 chr10 29431895 29434377 -110882388 + HERVH LTR ERV1 5229 7713 0 3410 60 2 9 chr10 29434377 29434828 -110881937 + LTR7 LTR ERV1 1 448 -2 202 339 0 0 chr10 29435437 29435493 -110881272 - L2 LINE L2 -43 3270 3215 1557 297 46 30 chr10 29435946 29436029 -110880736 - L2 LINE L2 -133 3180 3100 500 270 40 23 chr10 29436029 29436203 -110880562 - MER5B DNA MER1_type 0 178 2 1557 297 46 30 chr10 29436203 29436951 -110879814 - L2 LINE L2 -213 3100 2328 2198 114 0 10 chr10 29438398 29438697 -110878068 - AluSx SINE Alu -16 296 1 523 237 25 0 chr10 29438912 29439030 -110877735 - MIR SINE MIR -72 190 70 2001 116 0 69 chr10 29440372 29440690 -110876075 + AluSx SINE Alu 1 296 -16 1072 196 0 0 chr10 29441105 29441314 -110875451 - L1MB1 LINE L1 -36 6153 5945 2066 124 0 0 chr10 29441314 29441623 -110875142 - AluSx SINE Alu 0 309 1 25 0 0 0 chr10 29441919 29441944 -110874821 + AT_rich Low_complexity Low_complexity 1 25 0 2311 103 3 0 chr10 29442141 29442441 -110874324 + AluSx SINE Alu 1 301 -11 1399 175 49 8 chr10 29442448 29442711 -110874054 + AluJb SINE Alu 6 279 -33 1321 80 6 0 chr10 29442767 29442930 -110873835 + AluSp SINE Alu 11 174 -139 2104 131 0 16 chr10 29443050 29443356 -110873409 - AluJb SINE Alu 0 312 12 28 0 0 0 chr10 29443628 29443656 -110873109 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 29443843 29443864 -110872901 + AT_rich Low_complexity Low_complexity 1 21 0 723 96 0 0 chr10 29444329 29444423 -110872342 + AluS SINE Alu 3 96 -216 571 272 28 18 chr10 29444437 29444766 -110871999 - L1MCc LINE L1 -4891 1532 1341 505 236 80 30 chr10 29444772 29445050 -110871715 + L1ME3A LINE L1 5153 5445 -717 279 179 60 0 chr10 29445082 29445149 -110871616 + MER115 DNA AcHobo 583 653 -40 233 125 0 42 chr10 29445182 29445230 -110871535 - L1MC4 LINE L1 -5 8037 7992 * 830 275 127 32 chr10 29445226 29445626 -110871139 + L1ME3A LINE L1 5439 5915 -255 2290 102 0 0 chr10 29445626 29445919 -110870846 + AluSc SINE Alu 1 293 -16 830 275 127 32 chr10 29445919 29446108 -110870657 + L1ME3A LINE L1 5915 6084 -86 1217 76 0 0 chr10 29446301 29446445 -110870320 - AluSc SINE Alu -143 166 23 1062 100 0 0 chr10 29446445 29446585 -110870180 + AluSg/x SINE Alu 173 312 0 22 56 0 0 chr10 29447077 29447113 -110869652 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr10 29447145 29447169 -110869596 + AT_rich Low_complexity Low_complexity 1 24 0 1942 171 25 34 chr10 29447833 29448394 -110868371 - MLT2A2 LTR ERVL 0 554 1 1471 165 61 61 chr10 29448415 29448712 -110868053 - AluJo SINE Alu -15 297 1 274 289 0 78 chr10 29448712 29448854 -110867911 + MIR SINE MIR 65 195 -67 2112 118 6 13 chr10 29448861 29449174 -110867591 + AluSx SINE Alu 1 311 -1 1079 214 24 0 chr10 29449998 29450208 -110866557 - MER20 DNA MER1_type -4 215 1 278 299 104 28 chr10 29450414 29450558 -110866207 - MIR SINE MIR -10 252 98 917 119 8 0 chr10 29450558 29450684 -110866081 + AluSq/x SINE Alu 1 127 -186 1934 162 0 6 chr10 29450695 29451009 -110865756 + AluSx SINE Alu 1 312 0 639 170 71 0 chr10 29451633 29451774 -110864991 - L1ME3A LINE L1 -12 6158 6008 440 277 96 30 chr10 29452256 29452422 -110864343 + MER5B DNA MER1_type 2 178 0 398 322 106 24 chr10 29452919 29453127 -110863638 - MIR SINE MIR -1 261 37 2255 104 7 0 chr10 29453305 29453592 -110863173 + AluSg SINE Alu 9 297 -13 230 225 25 25 chr10 29453841 29453921 -110862844 - MLT1K LTR MaLR 0 588 509 622 251 115 92 chr10 29453935 29454465 -110862300 - MER34B LTR ERV1 0 565 1 35 0 0 0 chr10 29454527 29454562 -110862203 + AT_rich Low_complexity Low_complexity 1 35 0 4549 109 16 3 chr10 29454562 29455241 -110861524 - L1PB1 LINE L1 0 6151 5464 25 31 0 0 chr10 29455348 29455380 -110861385 + AT_rich Low_complexity Low_complexity 1 32 0 2519 88 38 0 chr10 29455468 29455810 -110860955 - THE1A LTR MaLR 0 355 1 580 359 83 16 chr10 29456018 29456509 -110860256 - MLT1K LTR MaLR -62 526 3 2192 183 54 22 chr10 29457495 29458026 -110858739 - LTR27 LTR ERV1 -141 495 3 405 269 110 0 chr10 29458280 29458425 -110858340 + L1MDa LINE L1 1001 1161 -5379 1220 188 31 10 chr10 29458425 29458713 -110858052 - LTR54 LTR ERV1 0 510 239 4129 140 11 3 chr10 29458721 29459421 -110857344 - L1MA4A LINE L1 -4 6299 5594 4520 138 25 89 chr10 29459421 29459573 -110857192 + L1M1 LINE L1 4250 4410 -1893 195 42 0 0 chr10 29459573 29459597 -110857168 + (TAAAA)n Simple_repeat Simple_repeat 4 27 0 4520 138 25 89 chr10 29459597 29460742 -110856023 + L1M1 LINE L1 4410 5438 -865 189 0 0 0 chr10 29460742 29460763 -110856002 + (CA)n Simple_repeat Simple_repeat 2 22 0 4520 138 25 89 chr10 29460763 29460896 -110855869 + L1M1 LINE L1 5438 5578 -725 803 213 72 5 chr10 29460948 29461169 -110855596 - LTR54 LTR ERV1 -274 236 1 778 180 0 0 chr10 29461187 29461309 -110855456 + FAM SINE Alu 10 131 -54 1726 214 48 67 chr10 29461311 29461971 -110854794 + L1MDa LINE L1 1300 1947 -4593 241 258 97 32 chr10 29462019 29462096 -110854669 + L1MDa LINE L1 2085 2156 -4384 4846 102 7 16 chr10 29462096 29462793 -110853972 + LTR8 LTR ERV1 1 691 0 241 258 97 32 chr10 29462793 29462870 -110853895 + L1MDa LINE L1 2156 2249 -4291 1308 246 93 17 chr10 29462881 29463475 -110853290 + L1MDa LINE L1 3338 3976 -2564 602 211 38 53 chr10 29463487 29463696 -110853069 + L1MDa LINE L1 3868 4073 -2467 2330 68 0 42 chr10 29463706 29464015 -110852750 + AluY SINE Alu 1 296 -15 5179 174 28 20 chr10 29464019 29465374 -110851391 - L1MC1 LINE L1 -122 6211 4837 929 184 12 0 chr10 29465480 29465643 -110851122 + FAM SINE Alu 1 165 -10 2365 75 7 0 chr10 29465651 29465944 -110850821 + AluY SINE Alu 1 295 -16 376 309 77 10 chr10 29466072 29466266 -110850499 - LTR33 LTR ERVL -4 517 311 586 248 44 35 chr10 29466342 29466617 -110850148 - ERVL LTR ERVL -883 4602 4460 687 209 0 0 chr10 29466923 29467061 -110849704 + FLAM_A SINE Alu 2 139 0 269 297 40 0 chr10 29468088 29468162 -110848603 - L2 LINE L2 -999 2315 2239 1003 155 44 33 chr10 29468162 29468343 -110848422 + AluJo SINE Alu 38 220 -92 260 173 0 0 chr10 29468343 29468395 -110848370 + FAM SINE Alu 127 178 -1 1613 198 66 50 chr10 29468558 29469058 -110847707 - Charlie1b DNA MER1_type 0 523 16 957 262 142 16 chr10 29469231 29469548 -110847217 - L2 LINE L2 0 3313 2957 302 224 0 0 chr10 29469666 29469715 -110847050 - L2 LINE L2 -20 3252 3204 231 293 120 54 chr10 29469997 29470164 -110846601 - MIR SINE MIR -65 197 20 359 226 73 48 chr10 29471333 29471457 -110845308 - MIR SINE MIR -86 176 50 19586 32 3 0 chr10 29471728 29474858 -110841907 + L1PA4 LINE L1 3013 6147 -8 405 0 0 0 chr10 29474933 29474978 -110841787 + (CA)n Simple_repeat Simple_repeat 1 45 0 1097 119 17 0 chr10 29475593 29475769 -110840996 + L1P LINE L1 461 639 -5507 9178 25 6 1 chr10 29475777 29477643 -110839122 + L1PA4 LINE L1 4281 6154 -1 2329 190 47 6 chr10 29477686 29478180 -110838585 + L1MCa LINE L1 27 540 -5886 665 126 8 8 chr10 29478178 29478305 -110838460 + L1MCa LINE L1 1880 2006 -4420 * 2271 62 0 0 chr10 29479525 29479823 -110836942 - AluSc SINE Alu 0 308 11 248 240 67 0 chr10 29480114 29480189 -110836576 - MER116 DNA Mariner 0 80 1 1846 163 7 7 chr10 29480308 29480597 -110836168 - AluJo SINE Alu -23 289 1 549 250 8 0 chr10 29480609 29480733 -110836032 - FLAM_C SINE Alu -8 125 1 340 331 104 0 chr10 29481237 29481391 -110835374 + MIR3 SINE MIR 5 174 -34 1461 165 97 25 chr10 29481733 29482012 -110834753 + AluJo SINE Alu 2 300 -12 249 388 24 24 chr10 29483939 29484189 -110832576 + L2 LINE L2 2909 3158 -114 343 304 20 20 chr10 29484208 29484310 -110832455 - L2 LINE L2 -16 3256 3155 188 294 183 32 chr10 29484564 29484690 -110832075 + MIR3 SINE MIR 7 151 -57 1311 189 191 79 chr10 29484819 29485189 -110831576 - L1MC4 LINE L1 -1 8041 7714 1933 137 7 14 chr10 29485189 29485482 -110831283 - AluSx SINE Alu -21 291 1 1311 189 191 79 chr10 29485482 29485930 -110830835 - L1MC4 LINE L1 -328 7714 7026 800 172 0 8 chr10 29485931 29486065 -110830700 - FLAM_A SINE Alu 0 133 1 28 0 0 0 chr10 29486256 29486284 -110830481 + AT_rich Low_complexity Low_complexity 1 28 0 1879 153 7 3 chr10 29486284 29486578 -110830187 - AluSx SINE Alu -13 299 5 2228 113 0 10 chr10 29487009 29487311 -110829454 - AluSx SINE Alu -13 299 1 320 270 83 83 chr10 29488480 29488710 -110828055 + HAL1b LINE L1 15 244 -1104 1747 154 29 10 chr10 29488735 29489041 -110827724 - AluJo SINE Alu 0 312 1 983 185 6 0 chr10 29489564 29489721 -110827044 + AluJb SINE Alu 137 294 -18 353 263 142 76 chr10 29489945 29490234 -110826531 - L1 LINE L1 -2945 3201 2894 2208 119 0 6 chr10 29490250 29490561 -110826204 + AluSx SINE Alu 1 309 -3 2288 104 0 0 chr10 29491056 29491355 -110825410 + AluSx SINE Alu 1 299 -13 2176 212 40 90 chr10 29491672 29493040 -110823725 - L1ME1 LINE L1 -25 6141 4848 2034 234 177 12 chr10 29493083 29493858 -110822907 + L1M4 LINE L1 3797 4699 -1447 1008 206 32 12 chr10 29493865 29494118 -110822647 - L1MEc LINE L1 -2096 4286 4029 * 2035 247 58 33 chr10 29494116 29494611 -110822154 - L1 LINE L1 -2649 3733 3207 2230 125 0 0 chr10 29494611 29494922 -110821843 + AluSx SINE Alu 2 312 0 2035 247 58 33 chr10 29494922 29495252 -110821513 - L1 LINE L1 -3175 3207 2887 3356 85 17 4 chr10 29495358 29495830 -110820935 + L1PB1 LINE L1 5674 6151 0 250 224 52 95 chr10 29495887 29496003 -110820762 + MER21B LTR ERV1 356 466 -397 189 0 0 0 chr10 29496122 29496143 -110820622 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1145 234 81 11 chr10 29496164 29497192 -110819573 - L1MEc LINE L1 -2667 3715 2190 949 258 48 0 chr10 29497242 29497576 -110819189 - L1MEc LINE L1 -4999 1564 1215 613 157 0 91 chr10 29497579 29497777 -110818988 - AluJ SINE Alu -3 309 130 1146 108 0 0 chr10 29497793 29497951 -110818814 + AluY SINE Alu 2 159 -152 2116 75 0 4 chr10 29498094 29498362 -110818403 + AluY SINE Alu 37 303 -8 778 180 0 0 chr10 29498362 29498490 -110818275 - AluJ SINE Alu -174 128 1 343 231 19 10 chr10 29498543 29498647 -110818118 - L1MEc LINE L1 -5461 1102 998 255 217 60 12 chr10 29498704 29498787 -110817978 - Charlie7 DNA MER1_type -2221 391 305 561 231 71 38 chr10 29498788 29499000 -110817765 + Charlie7 DNA MER1_type 381 599 -2013 22 35 0 0 chr10 29501156 29501185 -110815580 + AT_rich Low_complexity Low_complexity 1 29 0 235 294 41 0 chr10 29501747 29501933 -110814832 + (TCTA)n Simple_repeat Simple_repeat 1 193 0 341 312 229 11 chr10 29502869 29503311 -110813454 - L1ME LINE L1 -358 5804 5267 26 0 0 0 chr10 29505354 29505380 -110811385 + AT_rich Low_complexity Low_complexity 1 26 0 250 222 14 28 chr10 29505802 29505862 -110810903 - MER58A DNA MER1_type 0 224 166 434 156 13 13 chr10 29505862 29505939 -110810826 - MER58A DNA MER1_type 0 112 36 227 336 67 0 chr10 29506064 29506168 -110810597 - L2 LINE L2 -10 3303 3193 375 298 120 13 chr10 29506339 29506497 -110810268 + MER5B DNA MER1_type 1 175 -3 515 247 178 20 chr10 29508536 29508682 -110808083 + MER5A DNA MER1_type 18 186 -3 1026 178 104 0 chr10 29508690 29508892 -110807873 + MER58A DNA MER1_type 1 223 -1 209 289 0 0 chr10 29508964 29509016 -110807749 - MER5B DNA MER1_type -124 54 3 874 277 165 39 chr10 29509203 29509417 -110807348 - L2 LINE L2 -59 3254 3068 1368 100 91 0 chr10 29509417 29509627 -110807138 - MER30 DNA MER1_type 0 230 2 874 277 165 39 chr10 29509627 29510064 -110806701 - L2 LINE L2 -245 3068 2687 2462 49 10 0 chr10 29510064 29510352 -110806413 + AluY SINE Alu 4 294 -17 874 277 165 39 chr10 29510352 29510558 -110806207 - L2 LINE L2 -626 2687 2264 1093 166 78 5 chr10 29510614 29510819 -110805946 + AluJb SINE Alu 87 306 -6 2371 288 112 11 chr10 29510825 29511751 -110805014 - L2 LINE L2 -1171 2143 1124 810 293 38 0 chr10 29514416 29514655 -110802110 - MIR SINE MIR 0 262 15 21 0 0 0 chr10 29515603 29515624 -110801141 + AT_rich Low_complexity Low_complexity 1 21 0 506 310 137 51 chr10 29516079 29516531 -110800234 + MLT1K LTR MaLR 80 570 -18 303 294 46 18 chr10 29516618 29516727 -110800038 - HAL1b LINE L1 -54 1294 1183 372 279 90 75 chr10 29516888 29516980 -110799785 - L1MC4a LINE L1 -158 5963 5874 1769 164 13 13 chr10 29516980 29517291 -110799474 - AluJo SINE Alu -1 311 1 372 279 90 75 chr10 29517291 29517664 -110799101 - L1MC4a LINE L1 -247 5874 5491 622 138 28 0 chr10 29517708 29517817 -110798948 - L1PA16 LINE L1 -4 6162 6051 2327 99 0 0 chr10 29517830 29518122 -110798643 - AluSx SINE Alu -20 292 1 323 302 116 13 chr10 29518173 29518347 -110798418 - L1MC4a LINE L1 -780 5366 5175 21 36 0 0 chr10 29518429 29518457 -110798308 + AT_rich Low_complexity Low_complexity 1 28 0 425 220 93 0 chr10 29518668 29518786 -110797979 + Charlie4 DNA MER1_type 1821 1949 -12 350 259 90 58 chr10 29519200 29519389 -110797376 - L1MC4a LINE L1 -1647 4499 4305 270 246 0 0 chr10 29519555 29519612 -110797153 - L1ME1 LINE L1 -53 6113 6057 1427 179 21 39 chr10 29519612 29519897 -110796868 + AluJo SINE Alu 1 280 -32 255 270 81 45 chr10 29519915 29520026 -110796739 - L1ME1 LINE L1 -96 6070 5956 1248 193 34 0 chr10 29520180 29520419 -110796346 - AluJo SINE Alu -21 291 45 1613 143 29 0 chr10 29520444 29520682 -110796083 + AluSq SINE Alu 3 247 -66 1971 101 4 4 chr10 29520785 29521053 -110795712 - AluSq SINE Alu -45 268 1 1718 157 26 0 chr10 29521053 29521358 -110795407 + L1MC1 LINE L1 6016 6328 -5 2345 77 3 0 chr10 29521492 29521792 -110794973 + AluSc SINE Alu 1 301 -8 24 0 0 0 chr10 29522177 29522201 -110794564 + AT_rich Low_complexity Low_complexity 1 24 0 438 186 39 10 chr10 29522726 29522828 -110793937 + L1MD2 LINE L1 4844 4948 -1198 2257 85 7 0 chr10 29523316 29523621 -110793144 - AluSx SINE Alu -5 307 1 685 227 0 0 chr10 29523689 29523821 -110792944 + AluJ SINE Alu 2 133 -169 539 127 0 13 chr10 29523837 29523916 -110792849 + AluJ SINE Alu 207 284 -28 183 42 0 0 chr10 29524543 29524567 -110792198 + (CA)n Simple_repeat Simple_repeat 1 24 0 21 36 0 0 chr10 29524642 29524670 -110792095 + AT_rich Low_complexity Low_complexity 1 28 0 2376 82 0 10 chr10 29525040 29525346 -110791419 + AluSx SINE Alu 1 303 -9 466 322 49 6 chr10 29525355 29525538 -110791227 + MIR SINE MIR 57 247 -15 263 256 41 66 chr10 29525837 29525958 -110790807 + L1M4 LINE L1 2716 2833 -3313 1798 174 13 0 chr10 29526051 29526349 -110790416 + AluJb SINE Alu 3 304 -8 2116 218 130 39 chr10 29526566 29526807 -110789958 + L1MD2 LINE L1 5665 5883 -476 1656 155 60 18 chr10 29526807 29527091 -110789674 + AluJo SINE Alu 1 296 -16 2116 218 130 39 chr10 29527091 29527486 -110789279 + L1MD2 LINE L1 5883 6359 0 31 26 0 0 chr10 29527491 29527529 -110789236 + AT_rich Low_complexity Low_complexity 1 38 0 371 306 44 29 chr10 29527535 29527741 -110789024 + L1M4 LINE L1 3191 3399 -2747 305 300 59 27 chr10 29527952 29528172 -110788593 + L1M4 LINE L1 3719 3945 -2201 384 287 149 23 chr10 29528313 29528916 -110787849 + L1M4 LINE L1 4184 4862 -1284 2337 38 14 0 chr10 29528923 29529215 -110787550 + L1PA4 LINE L1 5860 6155 0 1595 318 92 21 chr10 29529279 29530050 -110786715 + L2 LINE L2 834 1659 -1655 2075 201 92 0 chr10 29530050 29530464 -110786301 - MER66A LTR ERV1 0 478 27 184 226 19 0 chr10 29530467 29530520 -110786245 + L2 LINE L2 1643 1696 -1618 340 266 53 41 chr10 29530536 29530700 -110786065 + L2 LINE L2 1797 1962 -1352 698 262 81 28 chr10 29530700 29530948 -110785817 + MIR SINE MIR 2 262 0 1631 259 110 60 chr10 29530952 29531276 -110785489 + L2 LINE L2 1978 2284 -1030 2313 74 3 29 chr10 29531276 29531585 -110785180 + AluSp SINE Alu 1 301 -12 189 0 0 0 chr10 29531590 29531611 -110785154 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 1631 259 110 60 chr10 29531611 29531999 -110784766 + L2 LINE L2 2287 2732 -582 800 271 129 70 chr10 29532080 29532467 -110784298 + MLT1J LTR MaLR 102 511 0 333 148 49 0 chr10 29532485 29532546 -110784219 - L1MA7 LINE L1 -88 6203 6140 * 5783 120 50 8 chr10 29532542 29533511 -110783254 - L1MA4A LINE L1 -5 6298 5290 784 252 145 29 chr10 29533511 29534041 -110782724 + L2 LINE L2 2720 3312 -1 310 307 96 60 chr10 29534058 29534309 -110782456 + L1M4 LINE L1 4879 5138 -1008 823 124 22 22 chr10 29534366 29534503 -110782262 + AluJb SINE Alu 3 139 -173 2232 57 0 11 chr10 29534622 29534904 -110781861 + AluY SINE Alu 33 311 0 1510 141 8 8 chr10 29535014 29535255 -110781510 + AluSp SINE Alu 71 311 -2 186 267 33 33 chr10 29535675 29535735 -110781030 + MER5A DNA MER1_type 44 103 -86 381 343 0 0 chr10 29535837 29535983 -110780782 + MERVL LTR ERVL 881 1026 -4459 292 254 0 15 chr10 29535985 29536052 -110780713 + MLT2F LTR ERVL 1 66 -597 7390 110 6 0 chr10 29536153 29537264 -110779501 + L1P LINE L1 2450 3567 -2579 2967 228 85 61 chr10 29537401 29539140 -110777625 - L1M3c LINE L1 -4516 1449 1 2036 123 41 3 chr10 29539144 29539436 -110777329 - AluSx SINE Alu -9 303 1 342 310 60 73 chr10 29539511 29539743 -110777022 - L1ME LINE L1 -546 5575 5347 729 208 56 22 chr10 29540376 29540554 -110776211 + MER53 DNA DNA 1 184 -5 2080 127 3 0 chr10 29541721 29542012 -110774753 - AluSx SINE Alu -20 292 1 22 35 0 0 chr10 29542078 29542107 -110774658 + AT_rich Low_complexity Low_complexity 1 29 0 321 305 55 16 chr10 29542222 29542350 -110774415 + L1P LINE L1 3562 3694 -2452 1043 231 65 15 chr10 29542353 29542613 -110774152 + MER82 DNA MER2_type 2 274 -379 642 262 14 0 chr10 29542734 29542875 -110773890 + MER82 DNA MER2_type 511 653 0 372 238 167 52 chr10 29543027 29543237 -110773528 + L1MC/D LINE L1 4586 4819 -1327 706 273 82 107 chr10 29543615 29543824 -110772941 + L1MC/D LINE L1 5325 5538 -632 2030 122 0 0 chr10 29543824 29544103 -110772662 + AluSg1 SINE Alu 21 299 -10 706 273 82 107 chr10 29544103 29544406 -110772359 + L1MC/D LINE L1 5538 5824 -346 27 29 0 0 chr10 29544758 29544792 -110771973 + AT_rich Low_complexity Low_complexity 1 34 0 408 218 138 58 chr10 29545483 29545657 -110771108 + MER5A DNA MER1_type 1 188 -1 230 254 0 0 chr10 29546314 29546373 -110770392 + L1MC5 LINE L1 7831 7889 -72 24 0 0 0 chr10 29546391 29546415 -110770350 + AT_rich Low_complexity Low_complexity 1 24 0 263 256 41 83 chr10 29546612 29546733 -110770032 - MLT1H LTR MaLR 0 549 434 425 231 8 16 chr10 29546884 29547005 -110769760 - MLT1H LTR MaLR -383 166 47 450 0 0 0 chr10 29547590 29547640 -110769125 + (TA)n Simple_repeat Simple_repeat 2 51 0 1349 216 43 77 chr10 29547873 29548331 -110768434 + MLT1H LTR MaLR 3 520 -29 363 208 0 94 chr10 29548877 29548983 -110767782 - MLT1H LTR MaLR 0 549 454 243 133 0 0 chr10 29549648 29549693 -110767072 + (TTTTC)n Simple_repeat Simple_repeat 5 49 0 * 452 121 10 30 chr10 29549689 29549788 -110766977 + (TCC)n Simple_repeat Simple_repeat 3 99 0 1329 174 5 0 chr10 29549813 29550032 -110766733 + AluSg/x SINE Alu 85 304 -6 1382 181 42 34 chr10 29550038 29550303 -110766462 - AluJo SINE Alu -35 277 11 2509 94 48 23 chr10 29551961 29552312 -110764453 + THE1B LTR MaLR 1 360 -4 62 58 0 0 chr10 29552745 29552849 -110763916 + AT_rich Low_complexity Low_complexity 1 104 0 1896 164 7 3 chr10 29552906 29553210 -110763555 + AluJo SINE Alu 6 310 -2 240 324 83 85 chr10 29553789 29554404 -110762361 + L2 LINE L2 2699 3313 0 231 256 87 120 chr10 29554415 29554657 -110762108 - L2 LINE L2 -33 3239 3006 1607 157 24 37 chr10 29554847 29555141 -110761624 + AluJo SINE Alu 3 292 -20 1471 174 58 34 chr10 29555271 29555565 -110761200 + AluJo SINE Alu 2 302 -10 409 279 111 20 chr10 29555570 29555775 -110760990 - L2 LINE L2 -260 3012 2790 701 302 86 33 chr10 29555826 29555981 -110760784 - LTR33 LTR ERVL 0 521 376 1893 106 91 0 chr10 29555981 29556256 -110760509 + AluSg SINE Alu 1 300 -10 701 302 86 33 chr10 29556256 29556554 -110760211 - LTR33 LTR ERVL -145 376 44 1935 129 18 3 chr10 29556626 29556912 -110759853 - L1PB4 LINE L1 -13 6143 5854 218 56 28 0 chr10 29556918 29556954 -110759811 + (TTGTG)n Simple_repeat Simple_repeat 1 37 0 2198 108 3 3 chr10 29556954 29557250 -110759515 - AluSc SINE Alu -13 296 1 2441 122 17 32 chr10 29557250 29557586 -110759179 - L1PB4 LINE L1 -288 5868 5537 2290 112 0 0 chr10 29557586 29557882 -110758883 + AluSx SINE Alu 1 296 -16 2441 122 17 32 chr10 29557882 29557948 -110758817 - L1PB4 LINE L1 -619 5537 5472 743 299 29 17 chr10 29558480 29558721 -110758044 + MIR SINE MIR 1 244 -18 198 239 0 0 chr10 29558903 29558949 -110757816 - L2 LINE L2 -5 3308 3263 507 180 20 10 chr10 29559940 29560040 -110756725 - MER63C DNA MER1_type -5 925 825 221 156 0 47 chr10 29560040 29560104 -110756661 + A-rich Low_complexity Low_complexity 1 61 0 210 37 0 0 chr10 29560310 29560337 -110756428 + (CAAAAA)n Simple_repeat Simple_repeat 1 27 0 1056 196 52 83 chr10 29560340 29560408 -110756357 - MER63C DNA MER1_type -226 834 765 1674 180 0 17 chr10 29560408 29560702 -110756063 + AluJo SINE Alu 22 310 -2 1056 196 52 83 chr10 29560702 29560930 -110755835 - MER63C DNA MER1_type -295 765 546 182 33 67 0 chr10 29560930 29560960 -110755805 + T-rich Low_complexity Low_complexity 2 33 0 1056 196 52 83 chr10 29560960 29560988 -110755777 - MER63C DNA MER1_type -514 546 519 1053 244 107 7 chr10 29560990 29561289 -110755476 + MER58B DNA MER1_type 2 330 -11 1002 203 52 44 chr10 29561282 29561553 -110755212 - MER63C DNA MER1_type -390 540 268 * 250 157 137 0 chr10 29561545 29561596 -110755169 + MER63 DNA MER1_type 480 537 -523 * 7397 195 60 30 chr10 29561649 29564120 -110752645 + L1M4c LINE L1 9 2634 -3748 324 208 99 10 chr10 29564221 29564322 -110752443 + L1M4c LINE L1 2632 2741 -3641 3870 264 202 23 chr10 29564322 29565870 -110750895 + L2 LINE L2 1078 2902 -412 287 250 53 0 chr10 29565896 29565972 -110750793 + L2 LINE L2 3186 3265 -48 2252 131 35 44 chr10 29566041 29566408 -110750357 + THE1B LTR MaLR 1 364 0 195 42 0 0 chr10 29567953 29567977 -110748788 + (T)n Simple_repeat Simple_repeat 1 24 0 379 152 15 0 chr10 29568161 29568227 -110748538 - MADE1 DNA Mariner 0 80 14 2256 231 54 47 chr10 29568227 29568927 -110747838 + L1ME3 LINE L1 5451 6155 -7 207 213 213 0 chr10 29569221 29569282 -110747483 - MER5B DNA MER1_type -101 77 4 556 316 32 0 chr10 29569391 29569549 -110747216 - HAL1 LINE L1 -1824 683 521 1562 202 95 0 chr10 29569549 29569885 -110746880 - MSTB LTR MaLR 0 426 59 2645 136 23 26 chr10 29569885 29570312 -110746453 - MSTB-int LTR MaLR -21 1630 1205 400 340 115 19 chr10 29570307 29570628 -110746137 - HAL1 LINE L1 -2070 437 86 * 554 234 51 0 chr10 29570678 29570815 -110745950 - L1ME3 LINE L1 0 6162 6019 1076 284 30 47 chr10 29570826 29571227 -110745538 - LTR16A LTR ERVL 0 450 57 1061 267 20 0 chr10 29571255 29571551 -110745214 - L1ME3 LINE L1 -151 6011 5710 1737 256 117 30 chr10 29571558 29571951 -110744814 - L1ME3 LINE L1 -2983 3163 2806 2227 116 0 0 chr10 29571951 29572243 -110744522 + AluY SINE Alu 1 292 -19 1737 256 117 30 chr10 29572243 29572692 -110744073 - L1ME3 LINE L1 -3340 2806 2223 1314 219 57 7 chr10 29572993 29573171 -110743594 - AluJo SINE Alu 0 312 112 209 33 33 0 chr10 29573171 29573201 -110743564 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1314 219 57 7 chr10 29573201 29573319 -110743446 - AluJo SINE Alu -200 112 1 1647 164 13 59 chr10 29573774 29574079 -110742686 - AluJo SINE Alu -21 291 1 2029 153 0 3 chr10 29575051 29575352 -110741413 - AluSx SINE Alu -12 300 1 359 352 83 32 chr10 29577146 29577362 -110739403 + L2 LINE L2 2560 2786 -528 919 191 0 6 chr10 29577413 29577570 -110739195 - FRAM SINE Alu -23 153 1 1656 137 8 0 chr10 29577906 29578154 -110738611 - AluSg SINE Alu 0 310 61 342 0 0 0 chr10 29578663 29578701 -110738064 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 249 327 28 9 chr10 29578721 29578828 -110737937 + L1ME3A LINE L1 5989 6097 -73 228 35 0 0 chr10 29580083 29580112 -110736653 + (GA)n Simple_repeat Simple_repeat 2 30 0 354 319 70 5 chr10 29581126 29581311 -110735454 + L2 LINE L2 3045 3241 -31 186 43 0 0 chr10 29581327 29581350 -110735415 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 894 176 29 12 chr10 29581435 29581605 -110735160 + FRAM SINE Alu 1 173 -3 1856 159 3 0 chr10 29582044 29582334 -110734431 + AluJo SINE Alu 1 291 -21 367 380 28 0 chr10 29582416 29582595 -110734170 + L3 LINE CR1 323 506 -1071 197 211 19 0 chr10 29582668 29582720 -110734045 + L3 LINE CR1 639 691 -886 1294 222 73 22 chr10 29582729 29583044 -110733721 + MER2 DNA MER2_type 15 345 0 403 391 9 5 chr10 29583053 29583265 -110733500 + L3 LINE CR1 695 907 -670 508 289 139 27 chr10 29583281 29583575 -110733190 + L3 LINE CR1 1117 1443 -134 2160 133 128 16 chr10 29585312 29585695 -110731070 + MSTA LTR MaLR 1 426 -2 2404 98 0 3 chr10 29588087 29588393 -110728372 + AluY SINE Alu 2 306 -5 2273 122 0 0 chr10 29589254 29589565 -110727200 - AluSx SINE Alu 0 312 2 213 260 87 120 chr10 29589753 29589995 -110726770 + L2 LINE L2 3006 3239 -33 258 328 78 80 chr10 29590006 29590621 -110726144 - L2 LINE L2 0 3313 2699 1931 165 7 0 chr10 29591200 29591503 -110725262 - AluJo SINE Alu -2 310 6 62 58 0 0 chr10 29591560 29591664 -110725101 + AT_rich Low_complexity Low_complexity 1 104 0 2509 94 48 23 chr10 29592097 29592448 -110724317 - THE1B LTR MaLR -4 360 1 5988 213 64 43 chr10 29594164 29596399 -110720366 + L1MB2 LINE L1 2648 5154 -2411 1346 142 47 39 chr10 29596399 29596632 -110720133 + MER46A DNA MER2_type 1 235 -1 5988 213 64 43 chr10 29596632 29597590 -110719175 + L1MB2 LINE L1 5154 6090 -1475 1361 220 37 3 chr10 29597874 29598055 -110718710 - AluJb SINE Alu -2 310 114 189 0 0 0 chr10 29598055 29598076 -110718689 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1361 220 37 3 chr10 29598076 29598189 -110718576 - AluJb SINE Alu -198 114 6 32284 108 14 56 chr10 29598621 29598636 -110718129 - L1PA7 LINE L1 0 6154 6140 2660 129 21 0 chr10 29598636 29599017 -110717748 - L1PA16 LINE L1 -9 6157 5769 32284 108 14 56 chr10 29599017 29605421 -110711344 - L1PA7 LINE L1 -14 6140 13 1472 100 91 0 chr10 29605421 29605641 -110711124 - L1PA16 LINE L1 -381 5785 5546 213 39 0 0 chr10 29605894 29605920 -110710845 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 273 308 98 42 chr10 29606551 29606694 -110710071 - L2 LINE L2 -5 3308 3158 1679 192 14 83 chr10 29606703 29607035 -110709730 - MLT2D LTR ERVL -2 412 117 1988 153 0 7 chr10 29607035 29607343 -110709422 + AluSx SINE Alu 1 306 -6 1679 192 14 83 chr10 29607343 29607453 -110709312 - MLT2D LTR ERVL -297 117 1 1797 198 177 62 chr10 29608407 29608967 -110707798 - MLT1E3 LTR MaLR 0 624 1 1353 203 25 60 chr10 29609004 29609485 -110707280 + L1MB2 LINE L1 6438 6897 -688 * 1389 230 55 28 chr10 29609480 29609880 -110706885 + L1ME1 LINE L1 5751 6161 -5 23 0 0 0 chr10 29610128 29610151 -110706614 + AT_rich Low_complexity Low_complexity 1 23 0 623 219 4 8 chr10 29610334 29610485 -110706280 + L1MB2 LINE L1 7088 7241 -349 827 118 79 8 chr10 29610488 29610615 -110706150 + AluJo SINE Alu 1 136 -176 1123 199 103 10 chr10 29610618 29610910 -110705855 + L1MB2 LINE L1 7232 7550 -40 226 173 0 115 chr10 29611219 29611271 -110705494 + Alu SINE Alu 2 47 -253 553 237 94 57 chr10 29611305 29611689 -110705076 - L1MEd LINE L1 -4867 1252 855 356 204 0 3 chr10 29611709 29611778 -110704987 + MSTB LTR MaLR 1 67 -361 28 29 0 0 chr10 29611801 29611836 -110704929 + AT_rich Low_complexity Low_complexity 1 35 0 409 255 10 10 chr10 29612133 29612231 -110704534 + MER5B DNA MER1_type 21 118 -60 1711 200 100 13 chr10 29613183 29613563 -110703202 + MSTB LTR MaLR 14 426 0 1037 232 42 32 chr10 29613669 29614153 -110702612 - MLT1E LTR MaLR -9 584 1 576 277 83 32 chr10 29614352 29614605 -110702160 - MLT1J LTR MaLR -8 503 238 186 43 0 0 chr10 29614827 29614850 -110701915 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 781 116 27 0 chr10 29614867 29614979 -110701786 - AluJb SINE Alu -189 123 9 2021 146 7 0 chr10 29615000 29615302 -110701463 - AluSq SINE Alu -9 304 1 37 0 0 0 chr10 29615450 29615487 -110701278 + AT_rich Low_complexity Low_complexity 1 37 0 1857 228 68 20 chr10 29616046 29616503 -110700262 + MLT1D LTR MaLR 1 479 -26 27 62 0 0 chr10 29616660 29616708 -110700057 + AT_rich Low_complexity Low_complexity 1 48 0 1724 194 3 0 chr10 29617102 29617406 -110699359 + AluJo SINE Alu 1 305 -7 38 68 0 0 chr10 29618133 29618206 -110698559 + AT_rich Low_complexity Low_complexity 1 73 0 25 51 0 0 chr10 29618499 29618538 -110698227 + AT_rich Low_complexity Low_complexity 1 39 0 336 176 0 0 chr10 29618795 29618867 -110697898 - L1MA4A LINE L1 -230 6073 5998 446 272 27 82 chr10 29618899 29619156 -110697609 - L2 LINE L2 -837 2477 2235 393 198 55 11 chr10 29619295 29619386 -110697379 + MER94 DNA DNA 6 100 -34 1574 179 24 31 chr10 29619684 29619825 -110696940 + AluJo SINE Alu 1 141 -171 2418 73 0 19 chr10 29619825 29620139 -110696626 + AluY SINE Alu 1 308 -3 1574 179 24 31 chr10 29620139 29620288 -110696477 + AluJo SINE Alu 141 289 -23 610 315 12 12 chr10 29620422 29620673 -110696092 + L1ME2 LINE L1 5698 5948 -216 1099 154 0 0 chr10 29620685 29620854 -110695911 - AluSg/x SINE Alu -9 303 135 1639 61 0 5 chr10 29620856 29621052 -110695713 - AluSq SINE Alu -118 195 1 1723 192 0 0 chr10 29621409 29621747 -110695018 - AluJb SINE Alu 0 346 9 1014 109 15 0 chr10 29621750 29621887 -110694878 - AluJo SINE Alu -173 139 1 492 208 69 0 chr10 29622858 29622954 -110693811 + MLT1D LTR MaLR 10 112 -393 2007 106 60 42 chr10 29622954 29623285 -110693480 + THE1B LTR MaLR 2 338 -26 403 86 103 0 chr10 29623311 29623369 -110693396 + THE1B LTR MaLR 301 364 0 * 1980 175 56 41 chr10 29623369 29623762 -110693003 + MLT1D LTR MaLR 107 505 0 283 251 209 16 chr10 29624203 29624390 -110692375 + HAL1 LINE L1 816 1038 -1469 1880 101 27 0 chr10 29624690 29624947 -110691818 + L1PA10 LINE L1 5905 6168 0 569 273 7 0 chr10 29624954 29625104 -110691661 - L1ME LINE L1 -3312 2903 2753 1362 152 14 0 chr10 29625104 29625314 -110691451 + AluJo SINE Alu 91 303 -9 534 241 107 74 chr10 29625431 29625862 -110690903 - L1ME LINE L1 -4510 1886 1442 * 640 269 113 9 chr10 29625834 29626154 -110690611 - L1ME LINE L1 -5070 1135 783 2037 172 27 64 chr10 29626194 29626373 -110690392 + MSTD LTR MaLR 1 185 -211 2378 104 0 0 chr10 29626373 29626680 -110690085 - AluSx SINE Alu 0 312 6 2037 172 27 64 chr10 29626680 29626908 -110689857 + MSTD LTR MaLR 185 393 -3 2177 144 48 67 chr10 29627071 29627570 -110689195 + L1MB1 LINE L1 5666 6163 -5 2576 132 277 80 chr10 29627576 29627904 -110688861 + L1MCa LINE L1 1033 1295 -5131 243 61 0 0 chr10 29627904 29627937 -110688828 + (CA)n Simple_repeat Simple_repeat 1 33 0 2576 132 277 80 chr10 29627937 29628405 -110688360 + L1MCa LINE L1 1295 1992 -4434 1696 169 29 4 chr10 29628405 29628684 -110688081 + AluJb SINE Alu 1 286 -26 848 203 34 0 chr10 29628701 29628849 -110687916 + FRAM SINE Alu 4 156 -20 327 171 110 0 chr10 29628850 29628932 -110687833 + L1MCa LINE L1 1979 2069 -4357 5816 215 109 27 chr10 29628954 29629869 -110686896 + L1MB8 LINE L1 3403 4241 -1937 247 114 0 0 chr10 29629869 29629904 -110686861 + tRNA-Gly-GGA tRNA tRNA 7 41 -34 5816 215 109 27 chr10 29629904 29631295 -110685470 + L1MB8 LINE L1 4241 5955 -223 325 125 18 47 chr10 29631300 29631370 -110685395 + AluSp SINE Alu 120 181 -122 2520 108 68 5 chr10 29631522 29631892 -110684873 + MSTA LTR MaLR 36 428 0 1976 148 75 87 chr10 29632542 29632685 -110684080 - Tigger2a DNA MER2_type -2275 433 290 2088 133 7 3 chr10 29632685 29632993 -110683772 + AluSx SINE Alu 1 309 -3 1976 148 75 87 chr10 29632993 29633287 -110683478 - Tigger2a DNA MER2_type -2418 290 1 598 295 96 71 chr10 29633451 29634337 -110682428 + L2 LINE L2 2315 3230 -42 962 189 123 16 chr10 29634982 29635226 -110681539 - LOR1a LTR ERV1 0 497 228 2323 87 55 29 chr10 29635272 29635619 -110681146 - THE1B LTR MaLR -8 356 1 443 200 35 9 chr10 29636109 29636224 -110680541 + LTR33A LTR ERVL 405 522 -1 21 0 0 0 chr10 29636417 29636438 -110680327 + AT_rich Low_complexity Low_complexity 1 21 0 2349 89 0 3 chr10 29636521 29636825 -110679940 + AluY SINE Alu 1 303 -8 1194 121 0 28 chr10 29636825 29637007 -110679758 + AluSg/x SINE Alu 134 310 -2 351 352 62 6 chr10 29637266 29637316 -110679449 - MER5A DNA MER1_type 0 189 143 216 0 0 0 chr10 29637316 29637340 -110679425 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 351 352 62 6 chr10 29637340 29637468 -110679297 - MER5A DNA MER1_type -46 143 1 531 0 0 0 chr10 29637528 29637587 -110679178 + (TG)n Simple_repeat Simple_repeat 1 59 0 257 0 30 0 chr10 29637586 29637619 -110679146 + (GA)n Simple_repeat Simple_repeat 1 34 0 * 413 148 0 0 chr10 29637825 29637886 -110678879 - L1PB1 LINE L1 -252 5899 5839 455 122 0 0 chr10 29637886 29637959 -110678806 + L1PB1 LINE L1 6076 6149 -2 2108 135 0 3 chr10 29639334 29639638 -110677127 - AluSx SINE Alu -9 303 1 2099 129 0 0 chr10 29640105 29640399 -110676366 - AluSx SINE Alu -4 308 15 1896 160 0 10 chr10 29640865 29641165 -110675600 + AluJb SINE Alu 3 299 -13 1772 174 14 0 chr10 29641477 29641827 -110674938 - L1MB4 LINE L1 -29 6151 5797 2182 132 0 0 chr10 29641841 29642145 -110674620 - AluSx SINE Alu -8 304 1 234 209 58 93 chr10 29644172 29644258 -110672507 + L2 LINE L2 3226 3308 -5 711 253 114 62 chr10 29644404 29644957 -110671808 + HAL1b LINE L1 310 891 -457 198 0 0 0 chr10 29645746 29645768 -110670997 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 270 0 0 0 chr10 29645767 29645797 -110670968 + (CA)n Simple_repeat Simple_repeat 1 30 0 253 188 0 14 chr10 29645797 29645866 -110670899 + L1ME3A LINE L1 5242 5309 -837 5257 144 33 19 chr10 29645942 29646970 -110669795 + L1MA6 LINE L1 5258 6299 -1 1306 177 113 11 chr10 29646975 29647241 -110669524 + AluJb SINE Alu 1 293 -19 1052 244 61 43 chr10 29647350 29647793 -110668972 + L1ME3A LINE L1 5437 5887 -283 396 21 0 0 chr10 29647790 29647838 -110668927 + L1P LINE L1 5233 5280 -866 * 230 79 0 26 chr10 29648329 29648367 -110668398 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 1377 216 107 5 chr10 29648382 29648767 -110667998 - Zaphod DNA AcHobo 0 4031 3608 359 284 37 0 chr10 29649200 29649362 -110667403 + (TA)n Simple_repeat Simple_repeat 1 168 0 267 118 29 49 chr10 29649369 29649471 -110667294 + (TATAA)n Simple_repeat Simple_repeat 5 104 0 47 19 0 0 chr10 29649471 29649525 -110667240 + AT_rich Low_complexity Low_complexity 1 54 0 369 216 54 0 chr10 29649525 29649692 -110667073 + (TA)n Simple_repeat Simple_repeat 1 176 0 195 42 0 0 chr10 29649718 29649742 -110667023 + (TA)n Simple_repeat Simple_repeat 1 24 0 278 50 0 0 chr10 29650137 29650177 -110666588 + L1MA1 LINE L1 6263 6302 0 210 377 14 0 chr10 29650319 29650388 -110666377 + L2 LINE L2 3157 3226 -46 520 224 34 7 chr10 29651810 29651957 -110664808 - MLT1B LTR MaLR -48 342 192 273 119 0 0 chr10 29651975 29652017 -110664748 + (GA)n Simple_repeat Simple_repeat 2 43 0 1959 122 0 0 chr10 29652095 29652358 -110664407 - AluSx SINE Alu -15 297 35 503 150 106 9 chr10 29652374 29652487 -110664278 - MLT1B LTR MaLR -266 124 1 700 254 45 69 chr10 29652616 29652821 -110663944 - MER58B DNA MER1_type -2090 330 135 2755 75 5 24 chr10 29652821 29653192 -110663573 + THE1B LTR MaLR 1 364 0 700 254 45 69 chr10 29653192 29653320 -110663445 - MER58B DNA MER1_type -2285 135 5 563 106 73 8 chr10 29653652 29653775 -110662990 + CT-rich Low_complexity Low_complexity 5 135 0 352 318 46 29 chr10 29655086 29655259 -110661506 - MIR SINE MIR -40 222 47 424 315 39 39 chr10 29656480 29656661 -110660104 - MIR3 SINE MIR -21 187 41 22 0 0 0 chr10 29657672 29657694 -110659071 + AT_rich Low_complexity Low_complexity 1 22 0 312 294 63 56 chr10 29659796 29660048 -110656717 + L1ME LINE L1 5083 5336 -810 316 265 105 25 chr10 29660184 29660384 -110656381 + L1ME LINE L1 5566 5781 -340 21 82 0 0 chr10 29660519 29660568 -110656197 + AT_rich Low_complexity Low_complexity 1 49 0 204 325 0 0 chr10 29661398 29661438 -110655327 - MIR SINE MIR -138 70 31 444 270 158 21 chr10 29662105 29662314 -110654451 + MIR SINE MIR 20 250 -12 319 305 16 53 chr10 29662902 29663092 -110653673 + MIR SINE MIR 47 229 -33 2176 106 26 3 chr10 29663273 29663575 -110653190 - AluSx SINE Alu -3 309 1 21 36 0 0 chr10 29663940 29663968 -110652797 + AT_rich Low_complexity Low_complexity 1 28 0 276 287 0 11 chr10 29664075 29664162 -110652603 - L1MC/D LINE L1 -2021 5787 5702 1064 129 0 47 chr10 29664322 29664492 -110652273 + AluSx SINE Alu 1 162 -150 23 68 0 0 chr10 29664942 29664986 -110651779 + AT_rich Low_complexity Low_complexity 1 44 0 22 80 0 0 chr10 29666329 29666379 -110650386 + AT_rich Low_complexity Low_complexity 1 50 0 260 246 83 99 chr10 29667149 29667295 -110649470 + MIR SINE MIR 6 146 -62 1835 157 3 20 chr10 29667295 29667601 -110649164 + AluJo SINE Alu 1 301 -11 260 246 83 99 chr10 29667601 29667660 -110649105 + MIR SINE MIR 146 204 -4 25 51 0 0 chr10 29668168 29668207 -110648558 + AT_rich Low_complexity Low_complexity 1 39 0 1667 105 24 4 chr10 29668308 29668585 -110648180 + AluSg SINE Alu 30 311 0 803 247 0 0 chr10 29668694 29668864 -110647901 + MIR SINE MIR 72 241 -21 1940 156 53 8 chr10 29668991 29669350 -110647415 + THE1C LTR MaLR 1 375 0 222 280 137 17 chr10 29669391 29669537 -110647228 - MER5A DNA MER1_type -27 151 4 21 0 0 0 chr10 29669640 29669661 -110647104 + AT_rich Low_complexity Low_complexity 1 21 0 3307 148 9 12 chr10 29669724 29670293 -110646472 - L1PA16 LINE L1 0 6166 5600 299 295 137 27 chr10 29671018 29671201 -110645564 - MIR SINE MIR -59 203 1 1430 202 41 3 chr10 29671732 29672024 -110644741 - AluJo SINE Alu -7 305 3 1543 163 42 49 chr10 29672822 29673129 -110643636 + AluJo SINE Alu 8 312 0 1071 99 17 0 chr10 29673136 29673308 -110643457 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 21 36 0 0 chr10 29673394 29673422 -110643343 + AT_rich Low_complexity Low_complexity 1 28 0 2012 146 3 16 chr10 29673733 29674049 -110642716 + AluSx SINE Alu 1 312 0 6469 25 4 9 chr10 29674470 29675244 -110641521 + L1PA4 LINE L1 5386 6155 0 277 289 74 15 chr10 29675332 29675467 -110641298 + L1ME3A LINE L1 6020 6162 -8 * 317 289 59 40 chr10 29675463 29675767 -110640998 + L1MC/D LINE L1 3914 4223 -1923 1051 263 13 0 chr10 29676449 29676685 -110640080 - MIR SINE MIR -22 240 2 523 273 120 52 chr10 29676845 29677270 -110639495 + L1MC/D LINE L1 5260 5713 -2095 2432 97 0 0 chr10 29677274 29677584 -110639181 - AluSg SINE Alu 0 310 1 186 43 0 0 chr10 29678041 29678064 -110638701 + (CAT)n Simple_repeat Simple_repeat 3 25 0 357 264 0 0 chr10 29678950 29679022 -110637743 + L2 LINE L2 3201 3272 0 296 372 9 0 chr10 29679078 29679191 -110637574 + MIR SINE MIR 34 147 -115 345 283 14 67 chr10 29680400 29680546 -110636219 - MIR SINE MIR -66 142 20 2378 51 3 51 chr10 29681973 29682286 -110634479 - AluY SINE Alu -13 298 1 2221 124 36 30 chr10 29682507 29682869 -110633896 - THE1B LTR MaLR 0 364 1 1110 156 113 40 chr10 29684165 29684466 -110632299 + MER33 DNA MER1_type 2 324 0 1139 133 0 57 chr10 29684803 29685013 -110631752 + MER2 DNA MER2_type 1 198 -147 2275 121 0 0 chr10 29685078 29685384 -110631381 - AluSx SINE Alu -6 306 1 249 169 85 17 chr10 29685407 29685466 -110631299 + MER2 DNA MER2_type 267 329 -16 2113 110 7 3 chr10 29685530 29685821 -110630944 - AluSc SINE Alu -17 292 1 201 208 21 0 chr10 29685843 29685891 -110630874 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 734 198 148 16 chr10 29686831 29687074 -110629691 - ORSL DNA AcHobo 0 275 1 4896 147 20 3 chr10 29687498 29687690 -110629075 + L1MB3 LINE L1 5284 5471 -712 315 0 0 0 chr10 29687690 29687725 -110629040 + (CA)n Simple_repeat Simple_repeat 2 36 0 4896 147 20 3 chr10 29687725 29688410 -110628355 + L1MB3 LINE L1 5471 6176 -7 314 234 50 57 chr10 29688594 29688616 -110628149 - L1MC4a LINE L1 -1877 5931 5910 1866 173 0 13 chr10 29688616 29688922 -110627843 + AluJo SINE Alu 1 302 -10 314 234 50 57 chr10 29688922 29689040 -110627725 - L1MC4a LINE L1 -1898 5910 5792 21 36 0 0 chr10 29689367 29689395 -110627370 + AT_rich Low_complexity Low_complexity 1 28 0 269 298 55 61 chr10 29689497 29690319 -110626446 - L1P LINE L1 -1086 5060 4233 2143 117 0 3 chr10 29690363 29690654 -110626111 - AluSx SINE Alu -22 290 1 275 250 29 0 chr10 29691264 29691332 -110625433 - MIR SINE MIR -13 249 180 1524 65 0 0 chr10 29692321 29692507 -110624258 + L1PA6 LINE L1 5969 6154 0 234 91 0 0 chr10 29693575 29693608 -110623157 + (A)n Simple_repeat Simple_repeat 1 33 0 23 0 0 0 chr10 29693893 29693916 -110622849 + AT_rich Low_complexity Low_complexity 1 23 0 6937 119 58 38 chr10 29694215 29694388 -110622377 + Tigger3b DNA MER2_type 1 169 -2859 2020 113 3 7 chr10 29694388 29694697 -110622068 + AluSx SINE Alu 1 308 0 6937 119 58 38 chr10 29694697 29694862 -110621903 + Tigger3b DNA MER2_type 169 329 -2699 2277 100 3 7 chr10 29694862 29695161 -110621604 + AluSx SINE Alu 1 298 -14 6937 119 58 38 chr10 29695161 29695664 -110621101 + Tigger3b DNA MER2_type 329 821 -2207 230 81 27 0 chr10 29695664 29695701 -110621064 + (CTCA)n Simple_repeat Simple_repeat 1 38 0 6937 119 58 38 chr10 29695701 29695775 -110620990 + Tigger3b DNA MER2_type 821 892 -2136 1575 137 53 114 chr10 29695775 29695922 -110620843 - MER1B DNA MER1_type -2374 336 182 2274 105 0 16 chr10 29695922 29696235 -110620530 + AluSg SINE Alu 1 308 -2 1575 137 53 114 chr10 29696235 29696445 -110620320 - MER1B DNA MER1_type -2528 182 1 6937 119 58 38 chr10 29696445 29696731 -110620034 + Tigger3b DNA MER2_type 892 1230 -1 1839 182 0 3 chr10 29697255 29697552 -110619213 + AluJo SINE Alu 1 296 -16 211 219 0 0 chr10 29697553 29697594 -110619171 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 238 258 217 0 chr10 29697604 29697724 -110619041 - L1ME4a LINE L1 -1 6120 5975 1169 131 66 22 chr10 29697985 29698168 -110618597 - MER1B DNA MER1_type -23 316 126 434 339 87 0 chr10 29698168 29698386 -110618379 - MIR SINE MIR -13 249 13 2567 49 0 7 chr10 29698667 29698973 -110617792 - AluY SINE Alu -7 304 1 627 78 0 52 chr10 29699563 29699678 -110617087 + (GGAA)n Simple_repeat Simple_repeat 2 110 0 213 39 0 0 chr10 29699679 29699705 -110617060 + (GAGAA)n Simple_repeat Simple_repeat 3 28 0 2242 109 7 0 chr10 29699707 29700000 -110616765 - AluSx SINE Alu -17 295 1 1047 95 12 30 chr10 29700233 29700401 -110616364 - AluSg/x SINE Alu -17 295 131 686 286 31 22 chr10 29702405 29702632 -110614133 - MIR SINE MIR -30 232 4 2206 98 3 7 chr10 29703262 29703558 -110613207 + AluSg SINE Alu 1 295 -15 313 142 3 42 chr10 29703558 29703635 -110613130 - L1M1 LINE L1 -621 5535 5459 743 299 29 17 chr10 29704157 29704398 -110612367 + MIR SINE MIR 1 244 -18 198 239 0 0 chr10 29704580 29704626 -110612139 - L2 LINE L2 -5 3308 3263 551 160 20 10 chr10 29705617 29705717 -110611048 - MER63C DNA MER1_type -4 926 826 191 35 0 35 chr10 29705719 29705748 -110611017 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 21 0 0 0 chr10 29705759 29705780 -110610985 + AT_rich Low_complexity Low_complexity 1 21 0 183 42 0 0 chr10 29705985 29706009 -110610756 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 1056 196 52 83 chr10 29706016 29706084 -110610681 - MER63C DNA MER1_type -226 835 766 1674 180 0 17 chr10 29706084 29706378 -110610387 + AluJo SINE Alu 22 310 -2 1056 196 52 83 chr10 29706378 29706606 -110610159 - MER63C DNA MER1_type -295 766 547 182 33 67 0 chr10 29706606 29706636 -110610129 + T-rich Low_complexity Low_complexity 2 33 0 1056 196 52 83 chr10 29706636 29706664 -110610101 - MER63C DNA MER1_type -514 547 520 1053 244 107 7 chr10 29706666 29706965 -110609800 + MER58B DNA MER1_type 2 330 -11 1016 203 52 44 chr10 29706958 29707229 -110609536 - MER63C DNA MER1_type -390 540 268 * 250 157 137 0 chr10 29707221 29707272 -110609493 + MER63 DNA MER1_type 480 537 -523 * 7425 195 60 30 chr10 29707325 29709795 -110606970 + L1M4c LINE L1 9 2634 -3748 330 198 99 10 chr10 29709896 29709997 -110606768 + L1M4c LINE L1 2632 2741 -3641 1343 307 109 19 chr10 29709997 29710538 -110606227 + L2 LINE L2 1078 1667 -1647 323 252 101 22 chr10 29710538 29710677 -110606088 + L2 LINE L2 1842 1991 -1323 21 0 0 0 chr10 29711376 29711397 -110605368 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 29712760 29712783 -110603982 + AT_rich Low_complexity Low_complexity 1 23 0 840 176 62 23 chr10 29712922 29713098 -110603667 + MER5A DNA MER1_type 3 185 -4 346 319 117 52 chr10 29714263 29714758 -110602007 + L1M2 LINE L1 387 913 -5936 342 115 0 0 chr10 29716692 29716744 -110600021 + (CA)n Simple_repeat Simple_repeat 2 53 0 21 0 0 0 chr10 29717853 29717874 -110598891 + GC_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr10 29717979 29718003 -110598762 + GC_rich Low_complexity Low_complexity 1 24 0 339 65 0 0 chr10 29718964 29719010 -110597755 + (TG)n Simple_repeat Simple_repeat 2 47 0 318 197 16 0 chr10 29720281 29720342 -110596423 - MSTD LTR MaLR -334 62 1 202 384 0 0 chr10 29720624 29720710 -110596055 + MER5A DNA MER1_type 45 130 -59 796 151 52 135 chr10 29720763 29721088 -110595677 - Charlie7 DNA MER1_type 0 2612 2315 2431 100 25 0 chr10 29721090 29721556 -110595209 - L1P4 LINE L1 -569 5594 5121 762 248 62 16 chr10 29721572 29721830 -110594935 - L1M1 LINE L1 -4289 3276 3007 1188 240 175 16 chr10 29721845 29722279 -110594486 - Charlie7 DNA MER1_type -390 2222 1720 245 303 98 8 chr10 29722617 29722749 -110594016 - MIR SINE MIR 0 262 119 25 31 0 0 chr10 29723160 29723192 -110593573 + AT_rich Low_complexity Low_complexity 1 32 0 385 273 61 68 chr10 29723516 29724078 -110592687 - L1MC5 LINE L1 -397 7411 7003 310 232 14 0 chr10 29724763 29724901 -110591864 + (CA)n Simple_repeat Simple_repeat 2 141 0 298 288 25 0 chr10 29724936 29725016 -110591749 - MER81 DNA DNA -32 82 1 420 180 255 0 chr10 29726269 29726408 -110590357 - MER5A DNA MER1_type -6 183 4 2159 216 6 33 chr10 29726418 29726928 -110589837 + L1MA9 LINE L1 5778 6273 -39 1437 164 57 18 chr10 29727226 29727507 -110589258 - AluJo SINE Alu -20 292 1 1306 229 109 68 chr10 29727842 29728295 -110588470 - MLT1J LTR MaLR -3 508 32 1029 247 18 18 chr10 29728295 29728518 -110588247 + MER58A DNA MER1_type 2 224 0 1306 229 109 68 chr10 29728518 29728552 -110588213 - MLT1J LTR MaLR -479 32 1 2205 141 0 0 chr10 29728553 29728866 -110587899 - AluSq SINE Alu 0 313 1 3048 171 56 0 chr10 29729268 29729807 -110586958 - LTR31 LTR ERV1 0 619 51 1647 204 10 16 chr10 29730396 29730709 -110586056 - AluJo SINE Alu -1 311 1 2146 81 153 16 chr10 29731571 29731891 -110584874 + THE1B LTR MaLR 1 364 0 25 0 0 0 chr10 29732040 29732065 -110584700 + AT_rich Low_complexity Low_complexity 1 25 0 33 43 0 0 chr10 29732258 29732305 -110584460 + AT_rich Low_complexity Low_complexity 1 47 0 342 273 0 34 chr10 29732737 29732825 -110583940 + L2 LINE L2 3005 3089 -224 213 39 0 0 chr10 29732836 29732862 -110583903 + (TTCC)n Simple_repeat Simple_repeat 1 26 0 629 202 17 6 chr10 29732886 29733064 -110583701 + CT-rich Low_complexity Low_complexity 1 180 0 1628 190 16 16 chr10 29733257 29733567 -110583198 - AluJo SINE Alu -2 310 1 320 286 136 13 chr10 29733586 29733740 -110583025 + L2 LINE L2 3119 3291 -22 2758 221 58 28 chr10 29733747 29734560 -110582205 - L1MCa LINE L1 -5279 891 46 414 216 0 0 chr10 29734838 29734926 -110581839 - L1PA16 LINE L1 0 6166 6079 4212 148 19 10 chr10 29734945 29735806 -110580959 - L1PB4 LINE L1 -176 5980 5116 711 254 99 38 chr10 29735828 29736270 -110580495 - MLT1J LTR MaLR 0 511 1 278 67 22 0 chr10 29736535 29736580 -110580185 + (TG)n Simple_repeat Simple_repeat 2 47 0 1461 166 92 87 chr10 29736657 29737048 -110579717 - MSTD LTR MaLR -3 393 1 275 247 71 12 chr10 29737760 29737845 -110578920 - MIR SINE MIR -6 256 167 4229 158 24 3 chr10 29738513 29739209 -110577556 - MER50 LTR ERV1 -23 711 1 1544 177 8 71 chr10 29739913 29740280 -110576485 - MER2 DNA MER2_type 0 344 1 2052 112 35 3 chr10 29740729 29741016 -110575749 - AluSx SINE Alu -16 296 1 244 226 71 36 chr10 29741099 29741183 -110575582 + MLT1H LTR MaLR 51 137 -412 231 210 16 48 chr10 29741678 29741740 -110575025 - MIR SINE MIR -113 149 90 208 259 0 0 chr10 29741891 29741945 -110574820 + A-rich Low_complexity Low_complexity 1 54 0 352 310 80 21 chr10 29743986 29744225 -110572540 - MLT1L LTR MaLR -10 605 353 330 78 0 169 chr10 29744398 29744441 -110572324 + L1MA8 LINE L1 6039 6065 -226 1640 145 4 0 chr10 29744441 29744682 -110572083 - AluSx SINE Alu -42 270 29 330 78 0 169 chr10 29744682 29744715 -110572050 + L1MA8 LINE L1 6065 6102 -189 1349 124 0 0 chr10 29744832 29745018 -110571747 + AluSg/x SINE Alu 111 296 -14 1926 127 3 45 chr10 29745871 29746185 -110570580 + AluSx SINE Alu 1 301 -11 206 355 36 9 chr10 29748477 29748587 -110568178 + L2 LINE L2 3160 3272 0 324 0 0 0 chr10 29750685 29750721 -110566044 + (TG)n Simple_repeat Simple_repeat 2 37 0 523 332 21 5 chr10 29752863 29753056 -110563709 + MIR3 SINE MIR 9 204 -4 225 298 51 72 chr10 29753406 29753688 -110563077 - L1M4 LINE L1 -1101 5045 4780 3152 96 7 0 chr10 29753688 29754134 -110562631 - L1PA10 LINE L1 -10 6158 5710 225 298 51 72 chr10 29754134 29754422 -110562343 - L1M4 LINE L1 -1366 4780 4487 512 315 16 63 chr10 29754768 29755336 -110561429 - L1M4 LINE L1 -2098 4048 3508 1695 160 34 17 chr10 29755479 29755773 -110560992 - AluJo SINE Alu -13 299 1 26 34 0 51 chr10 29756693 29756752 -110560013 + AT_rich Low_complexity Low_complexity 1 56 0 213 39 0 0 chr10 29757244 29757270 -110559495 + (TTC)n Simple_repeat Simple_repeat 2 27 0 1721 220 127 17 chr10 29758120 29758639 -110558126 - MLT1E2 LTR MaLR 0 626 51 962 141 0 0 chr10 29759025 29759167 -110557598 - AluJb SINE Alu -2 310 169 536 283 73 20 chr10 29759235 29759482 -110557283 - MIR SINE MIR 0 262 3 466 187 22 0 chr10 29759791 29759882 -110556883 - MIR SINE MIR -32 230 138 180 0 0 0 chr10 29761446 29761466 -110555299 + (T)n Simple_repeat Simple_repeat 1 20 0 1079 129 9 58 chr10 29761925 29762093 -110554672 + L1MA8 LINE L1 6077 6252 -39 1772 174 3 3 chr10 29762093 29762375 -110554390 + AluSx SINE Alu 1 282 -30 443 18 0 18 chr10 29762378 29762435 -110554330 + (TAAAA)n Simple_repeat Simple_repeat 2 57 0 1079 129 9 58 chr10 29762435 29762486 -110554279 + L1MA8 LINE L1 6254 6289 -2 1308 217 3 32 chr10 29762534 29762843 -110553922 - MLT1F1 LTR MaLR 0 567 268 246 210 0 0 chr10 29762837 29762899 -110553866 - MLT1F1 LTR MaLR -232 335 274 * 322 165 25 16 chr10 29763010 29763112 -110553653 - MLT1F1 LTR MaLR -222 371 274 263 140 0 0 chr10 29763182 29763232 -110553533 - MLT1F1 LTR MaLR -244 323 274 * 334 156 0 20 chr10 29763201 29763300 -110553465 - MLT1F1 LTR MaLR -232 335 264 263 185 0 15 chr10 29763267 29763332 -110553433 - MLT1F1 LTR MaLR -236 331 268 * 283 169 0 0 chr10 29763358 29763417 -110553348 - MLT1F1 LTR MaLR -232 335 277 246 155 17 0 chr10 29763420 29763478 -110553287 - MLT1F1 LTR MaLR -232 335 277 * 574 249 79 0 chr10 29763450 29763615 -110553150 - MLT1F1 LTR MaLR -232 335 158 372 164 0 0 chr10 29763669 29763730 -110553035 - 7SK RNA RNA 0 193 133 294 190 17 0 chr10 29763779 29763837 -110552928 - MLT1F1 LTR MaLR -508 59 1 446 294 128 41 chr10 29763925 29764269 -110552496 - L1M4 LINE L1 -2166 3980 3607 22 35 0 0 chr10 29764988 29765017 -110551748 + AT_rich Low_complexity Low_complexity 1 29 0 303 240 0 13 chr10 29765019 29765094 -110551671 - L1ME4a LINE L1 -6 6115 6042 618 237 0 0 chr10 29765122 29765286 -110551479 - FLAM_A SINE Alu 0 164 1 2200 148 16 82 chr10 29766058 29766202 -110550563 - L1MB7 LINE L1 0 6184 6032 1976 136 18 0 chr10 29766202 29766482 -110550283 - AluSx SINE Alu -27 285 1 2200 148 16 82 chr10 29766482 29766851 -110549914 - L1MB7 LINE L1 -152 6032 5705 1335 196 82 7 chr10 29766864 29767144 -110549621 - AluJo SINE Alu -11 301 1 1175 140 9 88 chr10 29767572 29767800 -110548965 + AluJo SINE Alu 87 296 -16 1557 36 5 0 chr10 29768019 29768211 -110548554 - L1PA5 LINE L1 0 6154 5962 458 258 33 82 chr10 29768287 29768593 -110548172 - L1ME LINE L1 -298 5823 5533 363 228 18 90 chr10 29768902 29768963 -110547802 - L1MA10 LINE L1 0 6334 6274 734 231 30 41 chr10 29768963 29769569 -110547196 - L1ME1 LINE L1 -44 6122 5423 248 275 56 70 chr10 29769627 29769769 -110546996 + MIR SINE MIR 73 212 -50 274 271 52 42 chr10 29769819 29769915 -110546850 + MIR3 SINE MIR 81 177 -31 231 204 0 0 chr10 29769966 29770015 -110546750 + (TA)n Simple_repeat Simple_repeat 2 50 0 21 0 0 0 chr10 29770212 29770233 -110546532 + AT_rich Low_complexity Low_complexity 1 21 0 422 275 162 27 chr10 29771054 29771425 -110545340 + MLT1H LTR MaLR 22 442 -107 636 271 6 18 chr10 29771862 29772032 -110544733 + MER5B DNA MER1_type 1 168 -10 279 93 0 0 chr10 29772457 29772500 -110544265 + MADE1 DNA Mariner 2 44 -36 342 304 36 7 chr10 29772513 29772651 -110544114 + MIR SINE MIR 120 261 -1 210 360 96 22 chr10 29772680 29772858 -110543907 - L3 LINE CR1 -155 1422 1232 1863 171 45 11 chr10 29772949 29773324 -110543441 - MLT1B LTR MaLR -2 388 1 262 208 0 99 chr10 29773492 29773593 -110543172 + LTR67 LTR ERVL 459 549 -8 2404 116 33 8 chr10 29773885 29774248 -110542517 + THE1C LTR MaLR 1 372 -3 632 183 50 0 chr10 29774443 29774590 -110542175 + MLT1J LTR MaLR 3 118 -328 316 249 183 6 chr10 29774681 29774850 -110541915 + MLT1J LTR MaLR 313 511 0 229 26 26 26 chr10 29775177 29775216 -110541549 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 189 271 29 71 chr10 29775417 29775487 -110541278 - L2 LINE L2 -2819 495 429 225 200 0 20 chr10 29775791 29775841 -110540924 + CT-rich Low_complexity Low_complexity 2 50 0 826 137 0 0 chr10 29775848 29775965 -110540800 - FLAM_C SINE Alu -16 117 1 329 239 37 0 chr10 29777827 29777936 -110538829 - L1M4 LINE L1 -3180 2966 2854 26 0 0 0 chr10 29778245 29778271 -110538494 + AT_rich Low_complexity Low_complexity 1 26 0 1925 115 79 0 chr10 29778274 29778553 -110538212 + AluSx SINE Alu 1 301 -11 207 0 0 0 chr10 29778553 29778576 -110538189 + (TA)n Simple_repeat Simple_repeat 2 24 0 248 189 27 14 chr10 29778595 29778669 -110538096 - L1M4 LINE L1 -3653 2493 2419 352 290 197 25 chr10 29778887 29779166 -110537599 + MLT1L LTR MaLR 141 467 -148 350 272 169 26 chr10 29779496 29779691 -110537074 + L1ME4a LINE L1 5694 5916 -205 212 256 122 0 chr10 29780293 29780375 -110536390 + MIR SINE MIR 100 191 -71 528 244 83 71 chr10 29781343 29781556 -110535209 + MLT1K LTR MaLR 315 533 -55 2431 88 0 3 chr10 29781556 29781861 -110534904 + AluSx SINE Alu 1 304 -8 528 244 83 71 chr10 29781861 29781901 -110534864 + MLT1K LTR MaLR 533 571 -17 1002 224 153 25 chr10 29783088 29783480 -110533285 + MLT1H LTR MaLR 71 549 0 1464 166 59 4 chr10 29785865 29786118 -110530647 + AluJo SINE Alu 40 306 -6 758 206 17 11 chr10 29787056 29787231 -110529534 + MLT1B LTR MaLR 215 390 0 27759 63 1 12 chr10 29787879 29792334 -110524431 - L1PA5 LINE L1 -157 5997 1591 609 299 69 18 chr10 29792620 29792837 -110523928 - MIR SINE MIR -24 238 11 1719 169 18 0 chr10 29793142 29793421 -110523344 - AluJo SINE Alu -14 298 15 2100 138 3 7 chr10 29793565 29793869 -110522896 - AluSx SINE Alu -9 303 1 576 250 7 0 chr10 29794394 29794542 -110522223 - L1ME LINE L1 -448 5722 5574 321 312 164 12 chr10 29795128 29795378 -110521387 - L2 LINE L2 -125 3188 2901 1336 178 0 9 chr10 29795378 29795603 -110521162 + AluJb SINE Alu 83 305 -7 2335 89 16 0 chr10 29795659 29795963 -110520802 + AluSx SINE Alu 2 310 -2 276 280 172 13 chr10 29796318 29796475 -110520290 - MIR SINE MIR 0 262 81 27 29 0 0 chr10 29797257 29797291 -110519474 + AT_rich Low_complexity Low_complexity 1 34 0 22 35 0 0 chr10 29797351 29797380 -110519385 + AT_rich Low_complexity Low_complexity 1 29 0 241 203 0 51 chr10 29798991 29799070 -110517695 + (TTAA)n Simple_repeat Simple_repeat 2 76 0 275 316 137 0 chr10 29799460 29799599 -110517166 + MIR SINE MIR 32 189 -73 200 295 16 0 chr10 29799606 29799667 -110517098 + (TATATG)n Simple_repeat Simple_repeat 3 64 0 2253 155 7 59 chr10 29799667 29799879 -110516886 + Tigger2a DNA MER2_type 1 178 -2530 1479 122 5 5 chr10 29799879 29800101 -110516664 - AluSq SINE Alu -6 307 86 2253 155 7 59 chr10 29800101 29800346 -110516419 + Tigger2a DNA MER2_type 178 434 0 279 236 205 37 chr10 29801253 29801414 -110515351 + MLT1J LTR MaLR 2 189 -322 249 309 100 0 chr10 29801738 29801848 -110514917 - MER91A DNA MER1_type -71 125 5 * 340 365 103 28 chr10 29801847 29802168 -110514597 + L2 LINE L2 2923 3267 -5 23 0 0 0 chr10 29802888 29802911 -110513854 + AT_rich Low_complexity Low_complexity 1 23 0 255 31 0 0 chr10 29803274 29803306 -110513459 + (TG)n Simple_repeat Simple_repeat 1 32 0 863 254 71 29 chr10 29804179 29804419 -110512346 + MIR SINE MIR 9 258 -4 286 388 47 8 chr10 29807609 29807867 -110508898 + L2 LINE L2 1830 2097 -1217 254 68 45 0 chr10 29808366 29808410 -110508355 + T-rich Low_complexity Low_complexity 1 46 0 5536 97 12 4 chr10 29808410 29809223 -110507542 - L1PA10 LINE L1 -21 6147 5328 2246 117 3 0 chr10 29809275 29809573 -110507192 - AluSx SINE Alu -13 299 1 2268 132 52 45 chr10 29810324 29810747 -110506018 + MSTB1 LTR MaLR 5 430 -2 350 247 66 96 chr10 29810896 29811062 -110505703 + MIR SINE MIR 28 188 -74 592 350 27 48 chr10 29811526 29811820 -110504945 - L2 LINE L2 -8 3264 2977 259 268 12 49 chr10 29811919 29812001 -110504764 + MER5A DNA MER1_type 48 126 -63 183 364 65 22 chr10 29812056 29812240 -110504525 - L2 LINE L2 -434 2880 2689 402 335 46 0 chr10 29812296 29812448 -110504317 + MIR SINE MIR 104 262 0 413 357 6 6 chr10 29812586 29812757 -110504008 + C-rich Low_complexity Low_complexity 2 172 0 183 80 0 0 chr10 29812938 29812963 -110503802 + (CAAAC)n Simple_repeat Simple_repeat 2 26 0 255 305 39 39 chr10 29813636 29813682 -110503083 + L2 LINE L2 3182 3227 -86 3152 209 32 2 chr10 29813682 29814315 -110502450 - MER82 DNA MER2_type -1 652 1 255 305 39 39 chr10 29814315 29814396 -110502369 + L2 LINE L2 3226 3309 -4 267 233 12 23 chr10 29814408 29814494 -110502271 + (CATATA)n Simple_repeat Simple_repeat 3 87 0 205 389 26 9 chr10 29814855 29814968 -110501797 + MIR SINE MIR 6 121 -87 503 289 22 33 chr10 29815246 29815426 -110501339 + L3 LINE CR1 1391 1568 -9 2169 118 0 0 chr10 29815949 29816236 -110500529 + AluSx SINE Alu 1 287 -25 1974 155 0 3 chr10 29816774 29817071 -110499694 - AluJo SINE Alu -16 296 1 225 0 0 0 chr10 29817379 29817404 -110499361 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1247 86 0 0 chr10 29818285 29818437 -110498328 + AluSg/x SINE Alu 149 300 -12 224 239 0 28 chr10 29818629 29818700 -110498065 + GA-rich Low_complexity Low_complexity 4 72 0 586 136 48 24 chr10 29819638 29819763 -110497002 - MER33 DNA MER1_type 0 363 236 2321 134 50 24 chr10 29819763 29820180 -110496585 - Tigger2a DNA MER2_type 0 434 7 649 206 82 11 chr10 29820188 29820260 -110496505 - MER33 DNA MER1_type -2387 198 133 1935 99 0 0 chr10 29820260 29820513 -110496252 - AluSq SINE Alu -17 296 44 649 206 82 11 chr10 29820513 29820624 -110496141 - MER33 DNA MER1_type -2452 133 2 2560 214 87 36 chr10 29822061 29822461 -110494304 - L1ME1 LINE L1 -9 6226 5848 201 39 0 0 chr10 29822461 29822487 -110494278 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 1915 150 0 0 chr10 29822487 29822767 -110493998 - AluSx SINE Alu -32 280 1 2560 214 87 36 chr10 29822767 29823592 -110493173 - L1ME1 LINE L1 -386 5849 4938 455 252 24 39 chr10 29823636 29823842 -110492923 - L1ME1 LINE L1 -3874 2522 2320 2102 105 0 4 chr10 29823846 29824151 -110492614 - AluSc SINE Alu 0 307 4 16798 56 2 0 chr10 29824251 29826531 -110490234 - L1P LINE L1 -2921 3225 942 6459 105 1 0 chr10 29826538 29827480 -110489285 + L1P LINE L1 11 953 -5193 227 320 33 33 chr10 29827910 29828032 -110488733 + L2 LINE L2 3143 3264 -8 223 247 41 0 chr10 29830347 29830444 -110486321 + (TA)n Simple_repeat Simple_repeat 1 101 0 805 308 159 10 chr10 29830776 29831166 -110485599 - L3 LINE CR1 -287 1290 843 463 226 37 92 chr10 29831381 29831449 -110485316 + MER5B DNA MER1_type 1 71 -107 1906 184 11 35 chr10 29831449 29831823 -110484942 + MLT1A1 LTR MaLR 1 365 0 463 226 37 92 chr10 29831823 29831918 -110484847 + MER5B DNA MER1_type 71 155 -23 518 301 104 6 chr10 29831970 29832133 -110484632 + MIR SINE MIR 58 236 -26 1681 155 65 25 chr10 29832332 29832610 -110484155 + AluJo SINE Alu 1 289 -23 393 280 0 93 chr10 29832788 29832857 -110483908 + MER5B DNA MER1_type 2 76 -102 1547 186 22 11 chr10 29832857 29833132 -110483633 + AluJb SINE Alu 3 280 -32 582 15 0 0 chr10 29833136 29833203 -110483562 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 393 280 0 93 chr10 29833203 29833321 -110483444 + MER5B DNA MER1_type 79 176 -2 5051 228 52 45 chr10 29833430 29835204 -110481561 + L1M4 LINE L1 15 1817 -4829 682 291 126 27 chr10 29835747 29836191 -110480574 + L1M4c LINE L1 539 1026 -5358 2280 115 0 3 chr10 29836195 29836500 -110480265 + AluSc SINE Alu 1 304 -5 258 138 0 0 chr10 29836504 29836562 -110480203 + (TA)n Simple_repeat Simple_repeat 1 58 0 1037 199 138 20 chr10 29836671 29837029 -110479736 + L1ME2 LINE L1 5236 5642 -522 324 279 165 0 chr10 29837026 29837184 -110479581 + L1ME2 LINE L1 5935 6118 -46 * 728 171 0 0 chr10 29838457 29838580 -110478185 + FRAM SINE Alu 1 40 0 228 297 93 22 chr10 29838908 29839090 -110477675 + HAL1b LINE L1 272 466 -882 1889 148 44 0 chr10 29839140 29839480 -110477285 + AluJb SINE Alu 1 353 0 272 213 38 12 chr10 29839526 29839606 -110477159 + HAL1b LINE L1 559 640 -708 2260 132 0 0 chr10 29839879 29840189 -110476576 + AluSx SINE Alu 1 310 -2 22 0 0 0 chr10 29840368 29840390 -110476375 + AT_rich Low_complexity Low_complexity 1 22 0 620 333 93 9 chr10 29840424 29840844 -110475921 + L1M4c LINE L1 2383 2837 -3545 1609 191 18 4 chr10 29840924 29841197 -110475568 + AluJo SINE Alu 5 281 -31 1018 15 31 0 chr10 29841200 29841330 -110475435 + (GAAA)n Simple_repeat Simple_repeat 1 134 0 532 300 45 66 chr10 29841542 29842626 -110474139 + L1M4c LINE L1 3126 4180 -2202 1655 199 11 0 chr10 29842626 29842902 -110473863 - AluJo SINE Alu -25 287 9 532 300 45 66 chr10 29842902 29843142 -110473623 + L1M4c LINE L1 4180 4423 -1959 893 138 0 0 chr10 29843147 29843277 -110473488 + AluSg/x SINE Alu 172 301 -11 813 239 62 19 chr10 29843301 29843510 -110473255 - MER58A DNA MER1_type 0 224 7 331 299 66 86 chr10 29843516 29843793 -110472972 + L1M4c LINE L1 4475 4746 -1636 482 169 15 100 chr10 29843799 29843929 -110472836 + L1MD3 LINE L1 7863 7981 -14 227 244 0 33 chr10 29844506 29844596 -110472169 + (CGGGG)n Simple_repeat Simple_repeat 5 91 0 204 190 35 0 chr10 29845553 29845611 -110471154 + T-rich Low_complexity Low_complexity 6 65 0 299 281 0 0 chr10 29846151 29846233 -110470532 - MIR3 SINE MIR -14 194 113 308 310 99 41 chr10 29846632 29846732 -110470033 + L1M4 LINE L1 2843 2936 -3210 1632 157 27 34 chr10 29846732 29847025 -110469740 + AluJb SINE Alu 1 291 -21 308 310 99 41 chr10 29847025 29847317 -110469448 + L1M4 LINE L1 2936 3258 -2888 29 28 0 0 chr10 29847833 29847869 -110468896 + AT_rich Low_complexity Low_complexity 1 36 0 2423 93 0 0 chr10 29848618 29848929 -110467836 - AluY SINE Alu 0 311 1 512 309 63 61 chr10 29849491 29849953 -110466812 + L2 LINE L2 1898 2360 -954 333 339 17 34 chr10 29849956 29850074 -110466691 - L2 LINE L2 0 3272 3157 513 285 87 16 chr10 29850686 29850928 -110465837 - MIR SINE MIR 0 262 4 424 211 53 23 chr10 29851010 29851143 -110465622 - HAL1b LINE L1 -43 1305 1169 728 307 64 29 chr10 29851202 29851717 -110465048 - HAL1b LINE L1 -441 907 375 433 299 170 44 chr10 29851724 29852072 -110464693 - HAL1b LINE L1 -1009 1410 12 1260 170 143 30 chr10 29852152 29852417 -110464348 + AluJo SINE Alu 1 295 -17 957 64 40 0 chr10 29852418 29852543 -110464222 + AluY SINE Alu 178 307 -4 231 36 0 0 chr10 29853011 29853039 -110463726 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 876 135 21 0 chr10 29853756 29853897 -110462868 - MER47A DNA MER2_type 0 366 223 1388 170 5 9 chr10 29853897 29854121 -110462644 - AluJo SINE Alu -84 228 6 1191 133 28 0 chr10 29854121 29854332 -110462433 - MER47A DNA MER2_type -149 217 1 532 275 149 58 chr10 29854474 29854856 -110461909 + L2 LINE L2 2897 3313 0 1552 189 33 19 chr10 29854864 29855171 -110461594 + AluJo SINE Alu 1 311 -1 246 370 31 52 chr10 29855199 29855488 -110461277 - L2 LINE L2 -465 2849 2567 2290 97 60 20 chr10 29855813 29856162 -110460603 + THE1B LTR MaLR 1 363 -1 287 214 8 0 chr10 29856321 29856452 -110460313 + (TA)n Simple_repeat Simple_repeat 2 133 0 328 226 294 7 chr10 29857272 29857418 -110459347 - MIR SINE MIR -71 191 4 27 29 0 0 chr10 29857534 29857568 -110459197 + AT_rich Low_complexity Low_complexity 1 34 0 315 268 0 0 chr10 29857743 29857840 -110458925 + (CATATA)n Simple_repeat Simple_repeat 2 98 0 802 134 0 0 chr10 29859279 29859398 -110457367 - AluSg/x SINE Alu 0 312 194 1709 178 72 35 chr10 29859852 29859896 -110456869 + MLT1B LTR MaLR 1 42 -348 1929 108 35 14 chr10 29859896 29860182 -110456583 - AluSq SINE Alu -11 302 11 1709 178 72 35 chr10 29860182 29860513 -110456252 + MLT1B LTR MaLR 42 390 0 1998 130 14 0 chr10 29860548 29860832 -110455933 - AluSx SINE Alu -3 309 22 1692 154 0 80 chr10 29861387 29861725 -110455040 + AluJo SINE Alu 1 311 -1 290 156 0 101 chr10 29862149 29862348 -110454417 + (TA)n Simple_repeat Simple_repeat 2 180 0 1812 178 7 10 chr10 29863159 29863468 -110453297 + AluJo SINE Alu 3 310 -2 180 0 0 0 chr10 29863552 29863572 -110453193 + (T)n Simple_repeat Simple_repeat 1 20 0 2440 177 9 2 chr10 29864040 29864486 -110452279 + MER6 DNA MER2_type 417 865 0 243 218 45 100 chr10 29864662 29864772 -110451993 - L1MC4 LINE L1 -15 8027 7924 247 296 12 37 chr10 29864935 29865016 -110451749 - L2 LINE L2 -4 3309 3231 2293 112 0 25 chr10 29865462 29865783 -110450982 + AluSq SINE Alu 1 313 0 301 219 51 0 chr10 29867369 29867506 -110449259 + (TA)n Simple_repeat Simple_repeat 1 144 0 1367 170 14 11 chr10 29867634 29867917 -110448848 - L1MA4 LINE L1 -11 6289 6006 984 173 0 0 chr10 29868558 29868708 -110448057 + FRAM SINE Alu 2 151 -25 216 0 0 0 chr10 29870018 29870042 -110446723 + (T)n Simple_repeat Simple_repeat 1 24 0 550 299 128 79 chr10 29870412 29871068 -110445697 - L2 LINE L2 -5 3267 2575 1015 167 0 6 chr10 29871827 29871989 -110444776 - AluSc SINE Alu -14 295 135 315 287 87 58 chr10 29872141 29872889 -110443876 + L1 LINE L1 4268 5037 -1109 1955 142 21 15 chr10 29872991 29873534 -110443231 - L1MA4 LINE L1 -640 5660 5119 270 136 17 0 chr10 29873537 29873596 -110443169 + L1PB4 LINE L1 6096 6155 -1 869 168 30 50 chr10 29873606 29873808 -110442957 + L1 LINE L1 4854 5051 -1095 499 336 36 81 chr10 29874628 29874832 -110441933 - L2 LINE L2 -2067 1247 1066 363 68 68 0 chr10 29874832 29874891 -110441874 + L1PB4 LINE L1 6093 6155 -1 499 336 36 81 chr10 29874891 29875070 -110441695 - L2 LINE L2 -2248 1066 881 27 0 0 0 chr10 29875592 29875619 -110441146 + AT_rich Low_complexity Low_complexity 1 27 0 24 32 0 0 chr10 29876678 29876709 -110440056 + AT_rich Low_complexity Low_complexity 1 31 0 2218 113 0 31 chr10 29877700 29878058 -110438707 + AluSx SINE Alu 1 348 0 1315 206 32 0 chr10 29878701 29879020 -110437745 + AluJo SINE Alu 1 328 0 273 265 60 0 chr10 29879223 29879306 -110437459 - HsTC2 DNA Tc2 -11 1887 1800 1352 209 43 0 chr10 29879420 29879698 -110437067 - AluJb SINE Alu -22 290 1 300 245 31 71 chr10 29879721 29879819 -110436946 + L1ME4a LINE L1 5735 5828 -1980 311 264 110 0 chr10 29879899 29879990 -110436775 + L1ME4a LINE L1 5997 6097 -24 677 221 61 17 chr10 29880090 29880129 -110436636 - MER3 DNA MER1_type -9 200 164 1729 167 44 3 chr10 29880129 29880422 -110436343 - AluSx SINE Alu -7 305 1 677 221 61 17 chr10 29880422 29880563 -110436202 - MER3 DNA MER1_type -45 164 12 351 206 92 8 chr10 29880888 29881019 -110435746 - Charlie2a DNA MER1_type -5 2857 2716 521 201 35 30 chr10 29881021 29881190 -110435575 - Charlie2a DNA MER1_type -1220 1642 1473 190 132 38 0 chr10 29881271 29881324 -110435441 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 371 254 0 26 chr10 29881329 29881443 -110435322 - Charlie2b DNA MER1_type -2116 666 556 240 289 21 31 chr10 29881444 29881541 -110435224 - Charlie2b DNA MER1_type -2473 309 214 231 281 0 0 chr10 29881579 29881643 -110435122 + (CATATA)n Simple_repeat Simple_repeat 4 67 0 332 333 213 21 chr10 29881699 29882450 -110434315 + L2 LINE L2 1755 2649 -665 22 0 0 0 chr10 29883229 29883251 -110433514 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 29883756 29883778 -110432987 + AT_rich Low_complexity Low_complexity 1 22 0 23617 120 12 77 chr10 29883848 29888564 -110428201 + L1P LINE L1 9 4421 -1725 931 137 0 0 chr10 29889197 29889336 -110427429 + AluSg/x SINE Alu 169 307 -3 568 308 52 15 chr10 29889362 29889690 -110427075 - L1M4 LINE L1 -1264 4882 4543 7103 52 7 2 chr10 29890116 29891857 -110424908 + L1PA7 LINE L1 4407 6153 -1 222 324 59 39 chr10 29891983 29892085 -110424680 - MIR3 SINE MIR -23 185 82 2241 130 0 0 chr10 29894401 29894708 -110422057 + AluSx SINE Alu 1 307 -5 1782 153 11 14 chr10 29895339 29895658 -110421107 + AluJo SINE Alu 1 318 0 2686 249 5 9 chr10 29895662 29896315 -110420450 + MER82 DNA MER2_type 1 653 0 233 263 74 21 chr10 29896653 29896748 -110420017 + L2 LINE L2 3164 3263 -50 2260 106 12 0 chr10 29897997 29898317 -110418448 - L1PA15 LINE L1 -6 6159 5836 3858 122 16 2 chr10 29898317 29899032 -110417733 + L1PA15 LINE L1 5109 5830 -335 637 286 41 27 chr10 29899085 29899481 -110417284 - L1MC4 LINE L1 -624 7418 7018 284 225 0 11 chr10 29899526 29899615 -110417150 + (TA)n Simple_repeat Simple_repeat 1 88 0 1003 255 34 45 chr10 29899620 29900086 -110416679 + L1ME LINE L1 1038 1498 -4928 1907 190 9 3 chr10 29900094 29900436 -110416329 - MLT1A1 LTR MaLR -1 364 21 587 255 17 11 chr10 29900442 29900620 -110416145 + L1ME LINE L1 1684 2117 -4310 275 274 128 10 chr10 29901259 29901334 -110415431 + L1MD3 LINE L1 6439 6530 -1465 2674 123 33 26 chr10 29901334 29901764 -110415001 + Tigger2a DNA MER2_type 1 433 -1 275 274 128 10 chr10 29901764 29901790 -110414975 + L1MD3 LINE L1 6530 6552 -1443 * 1695 260 43 11 chr10 29901782 29902501 -110414264 + L1ME LINE L1 2793 3534 -2892 689 181 36 22 chr10 29902654 29902792 -110413973 - AluJo SINE Alu -60 252 113 279 269 254 21 chr10 29902894 29903087 -110413678 - HAL1 LINE L1 -1778 729 492 346 284 55 0 chr10 29903388 29903497 -110413268 + L1ME LINE L1 5809 5923 -478 343 271 181 30 chr10 29903758 29903924 -110412841 - HAL1 LINE L1 -2265 242 52 31 0 0 0 chr10 29904362 29904393 -110412372 + AT_rich Low_complexity Low_complexity 1 31 0 779 300 56 46 chr10 29905478 29905995 -110410770 - ERVL LTR ERVL -450 5314 4793 341 248 248 13 chr10 29906177 29906326 -110410439 + L2 LINE L2 3130 3313 0 192 287 78 52 chr10 29907186 29907301 -110409464 + L3 LINE CR1 1197 1314 -263 22 0 0 0 chr10 29907484 29907506 -110409259 + AT_rich Low_complexity Low_complexity 1 22 0 2642 253 53 43 chr10 29908224 29909036 -110407729 + L1ME1 LINE L1 22 1045 -5495 2117 128 3 0 chr10 29909036 29909332 -110407433 + AluSx SINE Alu 1 297 -15 2642 253 53 43 chr10 29909332 29909817 -110406948 + L1ME1 LINE L1 1045 1524 -5016 1982 122 25 0 chr10 29911247 29911573 -110405192 + AluSx SINE Alu 1 333 0 23 54 0 0 chr10 29912063 29912100 -110404665 + AT_rich Low_complexity Low_complexity 1 37 0 2109 121 0 26 chr10 29912105 29912461 -110404304 + AluSx SINE Alu 1 312 0 2755 254 51 20 chr10 29913037 29914547 -110402218 + L1ME1 LINE L1 1732 3255 -3285 396 0 0 0 chr10 29914636 29914680 -110402085 + (CATA)n Simple_repeat Simple_repeat 2 45 0 470 188 0 0 chr10 29914680 29914765 -110402000 + AluSq/x SINE Alu 46 130 -182 5332 182 69 15 chr10 29914765 29916575 -110400190 - L1PA8 LINE L1 -12 6160 4248 5945 235 80 28 chr10 29916686 29918707 -110398058 + L1ME1 LINE L1 3468 5664 -896 2164 113 0 22 chr10 29918707 29919025 -110397740 + AluY SINE Alu 1 311 0 5945 235 80 28 chr10 29919025 29919649 -110397116 + L1ME1 LINE L1 5664 6254 -306 1968 209 62 66 chr10 29920884 29921463 -110395302 + L1ME3A LINE L1 5509 6085 -85 392 241 48 0 chr10 29921548 29921693 -110395072 + L1MD3 LINE L1 7842 7993 -2 821 165 0 0 chr10 29921868 29921989 -110394776 - FLAM_C SINE Alu -22 121 1 2483 229 76 40 chr10 29923457 29924230 -110392535 - L1ME2 LINE L1 0 6164 5359 1804 134 64 40 chr10 29924230 29924559 -110392206 - MER1B DNA MER1_type 0 337 1 2483 229 76 40 chr10 29924559 29924592 -110392173 - L1ME2 LINE L1 -805 5359 5329 477 163 23 0 chr10 29924596 29924682 -110392083 - AluSg/x SINE Alu -14 296 209 647 290 48 17 chr10 29925390 29925621 -110391144 + MIR SINE MIR 9 246 -16 2244 114 0 0 chr10 29926601 29926898 -110389867 - AluSx SINE Alu -15 297 1 204 125 0 0 chr10 29926944 29926976 -110389789 + (TG)n Simple_repeat Simple_repeat 1 32 0 478 371 36 46 chr10 29927594 29927982 -110388783 - L2 LINE L2 -60 3212 2829 186 103 0 0 chr10 29928480 29928509 -110388256 + (CAG)n Simple_repeat Simple_repeat 1 29 0 588 265 136 54 chr10 29928965 29929297 -110387468 - MLT1J LTR MaLR 0 511 153 962 167 172 0 chr10 29929352 29929538 -110387227 - AluJo SINE Alu -8 304 87 686 273 86 15 chr10 29929552 29930045 -110386720 - L1MEc LINE L1 -3686 2529 2027 572 206 69 28 chr10 29930246 29930425 -110386340 - L1MA10 LINE L1 0 6334 5988 281 246 0 0 chr10 29930450 29930511 -110386254 - L1MEc LINE L1 -6300 96 36 1006 267 58 64 chr10 29930585 29931605 -110385160 - L1MEd LINE L1 -4688 1622 561 704 287 107 21 chr10 29931640 29932185 -110384580 - L1MC4a LINE L1 -722 5432 5284 278 111 16 159 chr10 29932867 29932930 -110383835 - MER2 DNA MER2_type -12 333 280 1362 220 10 30 chr10 29932961 29933261 -110383504 + AluJo SINE Alu 1 294 -18 1922 130 36 20 chr10 29934219 29934340 -110382425 + AluSx SINE Alu 1 119 -193 186 71 0 0 chr10 29934340 29934368 -110382397 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 1922 130 36 20 chr10 29934368 29934547 -110382218 + AluSx SINE Alu 119 306 -6 468 288 36 39 chr10 29934704 29934985 -110381780 + L1ME LINE L1 5533 5812 -309 2180 109 3 3 chr10 29934985 29935278 -110381487 - AluSc SINE Alu -14 295 3 662 255 68 29 chr10 29935285 29935586 -110381179 - L1M4c LINE L1 -4870 1443 777 370 276 77 0 chr10 29936478 29936659 -110380106 - LTR33A LTR ERVL -2 521 327 284 234 191 37 chr10 29936697 29936885 -110379880 - LTR33A LTR ERVL -305 218 2 253 250 52 43 chr10 29937478 29937594 -110379171 - MLT1K LTR MaLR -65 523 407 26 30 0 0 chr10 29938420 29938453 -110378312 + AT_rich Low_complexity Low_complexity 1 33 0 268 306 298 8 chr10 29939151 29939272 -110377493 + MER91A DNA MER1_type 19 174 -22 24 0 0 0 chr10 29939781 29939805 -110376960 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 29939952 29939974 -110376791 + AT_rich Low_complexity Low_complexity 1 22 0 803 152 0 0 chr10 29940010 29940135 -110376630 - FRAM SINE Alu -10 166 42 332 161 18 0 chr10 29940135 29940191 -110376574 + MSTB1 LTR MaLR 271 327 -105 372 184 58 29 chr10 29940314 29940488 -110376277 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 567 320 71 0 chr10 29940812 29941009 -110375756 - MIR SINE MIR 0 262 52 359 331 143 15 chr10 29941074 29941340 -110375425 - HAL1 LINE L1 -756 1751 1452 2066 112 42 68 chr10 29941400 29941785 -110374980 - THE1C LTR MaLR 0 375 1 1094 246 138 13 chr10 29942373 29942771 -110373994 - MER20B DNA MER1_type -29 754 307 1168 162 13 40 chr10 29943757 29943985 -110372780 - AluJb SINE Alu -8 304 83 185 179 0 26 chr10 29944255 29944294 -110372471 + L2 LINE L2 3217 3254 -18 25 37 0 0 chr10 29944423 29944450 -110372315 + GC_rich Low_complexity Low_complexity 1 27 0 574 234 14 95 chr10 29944575 29944797 -110371968 + MER3 DNA MER1_type 6 209 0 1709 168 3 32 chr10 29944915 29945224 -110371541 - AluJo SINE Alu -12 300 1 359 375 85 9 chr10 29945726 29945950 -110370815 + MIR SINE MIR 3 243 -19 614 74 0 0 chr10 29946257 29946352 -110370413 + L1MA7 LINE L1 6196 6290 -1 2207 94 0 10 chr10 29946361 29946649 -110370116 + AluSq SINE Alu 1 340 0 435 18 18 0 chr10 29946649 29946704 -110370061 + (TAA)n Simple_repeat Simple_repeat 2 180 0 22 0 0 0 chr10 29946935 29946957 -110369808 + AT_rich Low_complexity Low_complexity 1 22 0 524 184 41 0 chr10 29947290 29947388 -110369377 - MER99 DNA DNA -725 103 2 203 231 77 88 chr10 29947393 29947484 -110369281 - MER91A DNA MER1_type -104 92 3 250 152 0 45 chr10 29947710 29947776 -110368989 + CT-rich Low_complexity Low_complexity 4 66 0 * 319 629 12 0 chr10 29947765 29947932 -110368833 + C-rich Low_complexity Low_complexity 4 172 0 592 170 0 0 chr10 29947944 29948038 -110368727 - AluJb SINE Alu -215 97 4 561 265 84 50 chr10 29948171 29948409 -110368356 + MIR SINE MIR 2 247 -15 1441 195 84 22 chr10 29951499 29951868 -110364897 - L2 LINE L2 -701 2613 2222 1373 194 114 19 chr10 29952162 29952523 -110364242 - MSTD LTR MaLR -1 395 1 2693 16 7 3 chr10 29952596 29952905 -110363860 - AluY SINE Alu -1 310 1 595 275 60 30 chr10 29953173 29953373 -110363392 - MIR SINE MIR -49 213 8 2127 126 17 0 chr10 29955684 29955986 -110360779 + AluSq SINE Alu 1 307 -6 232 281 16 0 chr10 29956750 29956814 -110359951 - MIR SINE MIR -10 252 188 180 111 0 0 chr10 29956903 29956930 -110359835 + (T)n Simple_repeat Simple_repeat 1 27 0 1124 152 15 108 chr10 29957032 29957301 -110359464 - AluJo SINE Alu -65 247 4 255 356 175 6 chr10 29957711 29957871 -110358894 - MIR SINE MIR -61 201 15 3098 141 29 4 chr10 29958885 29959402 -110357363 + L1PB4 LINE L1 5614 6143 -13 2155 112 3 3 chr10 29959714 29960017 -110356748 + AluSx SINE Alu 1 303 -9 269 258 136 77 chr10 29960043 29960264 -110356501 + L2 LINE L2 786 1019 -2295 1743 337 114 24 chr10 29960589 29962307 -110354458 - L2 LINE L2 -723 2591 720 318 267 39 16 chr10 29962333 29962395 -110354370 - L1M4 LINE L1 -1082 5064 5005 2078 153 15 6 chr10 29962395 29962735 -110354030 + MER61A LTR ERV1 1 343 0 318 267 39 16 chr10 29962735 29962850 -110353915 - L1M4 LINE L1 -1141 5005 4887 276 347 78 33 chr10 29962931 29963173 -110353592 + L2 LINE L2 2639 2891 -423 206 341 85 23 chr10 29963458 29963634 -110353131 - L2 LINE L2 -214 3058 2872 22 35 0 0 chr10 29966804 29966833 -110349932 + AT_rich Low_complexity Low_complexity 1 29 0 248 252 28 37 chr10 29967265 29967372 -110349393 + L1ME4a LINE L1 5513 5618 -503 433 286 187 14 chr10 29967428 29967711 -110349054 + L1ME4a LINE L1 5774 6105 -16 21 0 0 0 chr10 29969300 29969321 -110347444 + AT_rich Low_complexity Low_complexity 1 21 0 2219 102 0 3 chr10 29969362 29969657 -110347108 - AluSg SINE Alu -16 294 1 325 269 115 0 chr10 29969657 29969761 -110347004 - MIR SINE MIR -44 218 103 812 256 75 34 chr10 29969884 29970204 -110346561 + MER46C DNA MER2_type 1 333 -5 211 197 115 16 chr10 29970213 29970274 -110346491 - MIR SINE MIR -70 192 126 1960 154 0 0 chr10 29970289 29970568 -110346197 + AluSx SINE Alu 1 279 -33 350 252 274 0 chr10 29970665 29970800 -110345965 + MIR SINE MIR 81 252 -10 894 234 92 107 chr10 29971778 29972441 -110344324 + LTR50 LTR ERVL 20 672 -123 39 22 0 0 chr10 29973771 29973817 -110342948 + AT_rich Low_complexity Low_complexity 1 46 0 450 152 0 0 chr10 29973824 29973890 -110342875 - AluSg/x SINE Alu -26 283 218 906 118 77 72 chr10 29973997 29974192 -110342573 - L1PA16 LINE L1 -247 5919 5724 1251 169 78 13 chr10 29974285 29974516 -110342249 - AluJo SINE Alu -13 299 54 606 263 105 19 chr10 29974532 29974798 -110341967 - HERVL LTR ERVL -1230 4424 4136 211 227 59 118 chr10 29974801 29974920 -110341845 - L3 LINE CR1 -77 1500 1389 1254 111 53 0 chr10 29975190 29975397 -110341368 - L1MB3 LINE L1 -3 6180 5963 441 265 57 62 chr10 29976639 29976914 -110339851 + LTR16A LTR ERVL 147 438 -12 429 353 56 15 chr10 29976925 29977194 -110339571 + L2 LINE L2 2623 2902 -412 240 220 20 0 chr10 29977269 29977319 -110339446 + L2 LINE L2 3263 3313 0 1615 166 24 104 chr10 29977812 29977988 -110338777 + MLT1B LTR MaLR 1 190 -200 1700 147 45 49 chr10 29977988 29978274 -110338491 + AluJb SINE Alu 1 285 -27 1615 166 24 104 chr10 29978274 29978518 -110338247 + MLT1B LTR MaLR 190 387 -3 2468 124 0 8 chr10 29978608 29978988 -110337777 - MER1A DNA MER1_type 0 529 153 352 333 0 16 chr10 29979328 29979454 -110337311 - L2 LINE L2 -23 3290 3167 868 179 0 73 chr10 29979465 29979644 -110337121 + FRAM SINE Alu 1 166 0 1826 115 0 95 chr10 29980304 29980608 -110336157 + AluSx SINE Alu 1 275 -37 2093 183 52 7 chr10 29980796 29981239 -110335526 + MLT1D LTR MaLR 31 493 -12 245 304 14 0 chr10 29981298 29981367 -110335398 + L2 LINE L2 3203 3272 0 1006 151 5 48 chr10 29981706 29981892 -110334873 + AluSg/x SINE Alu 134 311 -1 1740 124 0 93 chr10 29982160 29982482 -110334283 - AluJo SINE Alu -20 292 1 266 333 0 10 chr10 29982662 29982761 -110334004 - MIR3 SINE MIR -3 205 108 1559 208 3 3 chr10 29984413 29984702 -110332063 + AluJo SINE Alu 1 289 -23 385 321 42 9 chr10 29985001 29985334 -110331431 - L1M4c LINE L1 -4022 2362 2019 400 186 12 12 chr10 29985377 29985463 -110331302 - L1MD1 LINE L1 -16 6620 6535 2820 221 16 10 chr10 29985513 29986192 -110330573 - L1MD1 LINE L1 -72 6564 5882 974 180 45 36 chr10 29986218 29986440 -110330325 - MLT1A2 LTR MaLR -133 241 18 1545 199 151 5 chr10 29986458 29986875 -110329890 - MLT1A2-int LTR MaLR 0 1735 1258 2303 153 49 14 chr10 29986944 29987236 -110329529 - L1MC1 LINE L1 -177 6156 5841 1677 211 25 25 chr10 29987236 29987561 -110329204 + MLT1A1 LTR MaLR 1 328 -37 2066 112 44 0 chr10 29987561 29987857 -110328908 - AluSc SINE Alu 0 309 1 1677 211 25 25 chr10 29987857 29987896 -110328869 + MLT1A1 LTR MaLR 327 365 0 2303 153 49 14 chr10 29987896 29988048 -110328717 - L1MC1 LINE L1 -492 5841 5696 790 229 16 28 chr10 29988049 29988302 -110328463 - L1MD1 LINE L1 -2092 4448 4199 1645 244 46 28 chr10 29988348 29989062 -110327703 - L1MD1 LINE L1 -2475 4065 3339 2617 146 6 2 chr10 29989081 29989562 -110327203 + L1 LINE L1 4478 4960 -1186 2910 128 17 50 chr10 29989583 29990100 -110326665 + L1PA16 LINE L1 5660 6159 -7 1443 231 64 32 chr10 29990613 29991413 -110325352 - L1MD1 LINE L1 -3562 2978 2153 3933 223 73 23 chr10 29992052 29993624 -110323141 - L1MD1 LINE L1 -4379 2161 251 252 0 0 0 chr10 29993624 29993652 -110323113 + (TTG)n Simple_repeat Simple_repeat 3 30 0 3933 223 73 23 chr10 29993652 29993917 -110322848 - L1MD1 LINE L1 -6289 251 1 2019 256 79 22 chr10 29993909 29994850 -110321915 - L1M4c LINE L1 -4489 1895 902 * 376 178 0 0 chr10 29994861 29994934 -110321831 - MSTC LTR MaLR -355 73 1 765 325 116 37 chr10 29994934 29996087 -110320678 + L2 LINE L2 1575 3123 -190 323 306 211 33 chr10 29996424 29996760 -110320005 + L2 LINE L2 2221 2616 -698 196 255 39 59 chr10 29996944 29997046 -110319719 + L2 LINE L2 2977 3076 -196 342 0 0 0 chr10 29997852 29997890 -110318875 + (TG)n Simple_repeat Simple_repeat 2 39 0 2529 92 14 0 chr10 29998277 29998635 -110318130 - L1PB1 LINE L1 0 6151 5789 862 330 104 29 chr10 29998682 29999403 -110317362 + L2 LINE L2 1840 2614 -700 311 333 10 0 chr10 29999535 29999637 -110317128 + MER5A DNA MER1_type 1 103 -86 1436 178 37 40 chr10 29999783 30000081 -110316684 - AluJb SINE Alu -15 297 1 320 359 94 6 chr10 30000398 30000568 -110316197 + L2 LINE L2 3087 3271 -1 3673 34 2 0 chr10 30000613 30001051 -110315714 + L1PA4 LINE L1 5716 6154 -1 187 325 0 12 chr10 30001211 30001294 -110315471 - L2 LINE L2 -688 2626 2545 2880 190 23 29 chr10 30001345 30001965 -110314800 - MLT1E3 LTR MaLR 0 624 9 2181 103 3 0 chr10 30002436 30002728 -110314037 + AluSx SINE Alu 1 293 -19 457 292 72 26 chr10 30003943 30004138 -110312627 + MIR SINE MIR 3 206 -56 2517 71 0 0 chr10 30004474 30004782 -110311983 + AluY SINE Alu 1 308 -3 837 271 31 9 chr10 30004923 30005152 -110311613 - MIR SINE MIR -11 251 18 997 98 0 0 chr10 30006292 30006424 -110310341 + FLAM_C SINE Alu 1 132 -1 2118 123 0 7 chr10 30009456 30009758 -110307007 - AluSx SINE Alu -12 300 1 560 179 0 0 chr10 30010873 30010968 -110305797 - AluJb SINE Alu -28 284 190 1597 186 0 4 chr10 30010971 30011240 -110305525 - AluJb SINE Alu -44 268 1 235 233 95 17 chr10 30013041 30013157 -110303608 + L1ME LINE L1 28 152 -5918 274 331 38 6 chr10 30013320 30013480 -110303285 + L1ME LINE L1 320 484 -5586 1825 265 114 26 chr10 30013646 30013774 -110302991 + L1ME LINE L1 526 641 -5439 242 29 29 0 chr10 30013774 30013809 -110302956 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 1825 265 114 26 chr10 30013809 30014115 -110302650 + L1ME LINE L1 641 919 -5161 180 0 0 0 chr10 30014115 30014135 -110302630 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1825 265 114 26 chr10 30014135 30015146 -110301619 + L1ME LINE L1 919 2075 -4005 450 0 0 0 chr10 30015151 30015201 -110301564 + (CA)n Simple_repeat Simple_repeat 2 51 0 389 221 81 23 chr10 30015203 30015375 -110301390 + L1 LINE L1 3821 4002 -2144 1308 181 26 20 chr10 30015456 30015798 -110300967 + L1M4 LINE L1 4981 5324 -822 1941 154 7 7 chr10 30015798 30016103 -110300662 + AluSx SINE Alu 1 305 -7 1340 188 60 94 chr10 30016107 30016216 -110300549 + L1 LINE L1 3973 4084 -2062 1927 130 0 68 chr10 30016216 30016539 -110300226 + AluSx SINE Alu 1 301 -11 1340 188 60 94 chr10 30016539 30016718 -110300047 + L1 LINE L1 4084 4268 -1878 333 47 0 0 chr10 30016718 30016761 -110300004 + (CA)n Simple_repeat Simple_repeat 2 44 0 1340 188 60 94 chr10 30016761 30016972 -110299793 + L1 LINE L1 4268 4456 -1690 187 303 15 45 chr10 30017102 30017168 -110299597 - MER5B DNA MER1_type -83 95 32 1467 93 44 4 chr10 30017182 30017407 -110299358 + L1PA8 LINE L1 5938 6171 -1 241 253 157 10 chr10 30017420 30017631 -110299134 - L1MC/D LINE L1 -705 5537 5296 1995 147 3 0 chr10 30017704 30018003 -110298762 - AluSx SINE Alu -12 300 1 228 346 87 51 chr10 30018003 30018373 -110298392 - L2 LINE L2 -521 2793 2411 424 355 101 14 chr10 30018582 30018928 -110297837 - L2 LINE L2 -2315 999 624 264 216 23 23 chr10 30018934 30019022 -110297743 + MER20B DNA MER1_type 2 89 -694 2328 109 0 0 chr10 30019195 30019499 -110297266 - AluSx SINE Alu -8 304 1 750 180 71 42 chr10 30019744 30019983 -110296782 + MER20B DNA MER1_type 515 760 -23 2304 70 11 7 chr10 30021088 30021375 -110295390 - AluY SINE Alu -23 288 1 42 0 0 0 chr10 30021761 30021803 -110294962 + AT_rich Low_complexity Low_complexity 1 42 0 1579 79 34 38 chr10 30021814 30021860 -110294905 - L1MA1 LINE L1 -4 6298 6253 192 40 0 0 chr10 30021860 30021885 -110294880 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2194 106 0 3 chr10 30021885 30022168 -110294597 - AluSc SINE Alu -27 282 1 1579 79 34 38 chr10 30022168 30022386 -110294379 - L1MA1 LINE L1 -47 6255 6034 506 287 102 0 chr10 30022401 30022568 -110294197 - MIR SINE MIR -13 249 66 461 297 18 0 chr10 30022870 30023035 -110293730 + L1ME3A LINE L1 4458 4625 -1521 377 210 25 95 chr10 30023107 30023307 -110293458 + L1ME3A LINE L1 5377 5562 -600 1866 184 70 25 chr10 30023322 30023724 -110293041 + MSTB1 LTR MaLR 1 420 -12 750 276 68 13 chr10 30023794 30024105 -110292660 + L1ME3A LINE L1 5613 5940 -230 2026 156 13 0 chr10 30024106 30024408 -110292357 + AluSx SINE Alu 1 306 -6 327 301 104 38 chr10 30024552 30024898 -110291867 + HAL1b LINE L1 230 598 -750 3632 205 76 71 chr10 30025340 30025489 -110291276 - L1MC/D LINE L1 -912 5234 5087 2394 80 3 0 chr10 30025489 30025791 -110290974 + AluY SINE Alu 1 303 -8 3632 205 76 71 chr10 30025791 30026899 -110289866 - L1MC/D LINE L1 -1059 5087 3987 227 191 0 0 chr10 30026899 30026941 -110289824 - AluSx SINE Alu -6 296 255 1634 134 0 0 chr10 30026941 30027157 -110289608 - AluSx SINE Alu -96 216 1 3632 205 76 71 chr10 30027157 30027297 -110289468 - L1MC/D LINE L1 -2158 3988 3786 302 211 39 39 chr10 30027298 30027402 -110289363 - MER46A DNA MER2_type -2 234 131 186 150 0 0 chr10 30029576 30029616 -110287149 + (TG)n Simple_repeat Simple_repeat 2 41 0 859 118 0 0 chr10 30029852 30029971 -110286794 - AluSq/x SINE Alu -193 119 1 25 0 0 0 chr10 30030604 30030629 -110286136 + AT_rich Low_complexity Low_complexity 1 25 0 1734 174 3 3 chr10 30030732 30031019 -110285746 - AluJo SINE Alu -25 287 1 26 88 0 0 chr10 30031074 30031142 -110285623 + AT_rich Low_complexity Low_complexity 1 68 0 1885 155 7 19 chr10 30031619 30031928 -110284837 + AluSx SINE Alu 1 305 -7 4454 213 92 27 chr10 30032152 30033517 -110283248 + Charlie1a DNA MER1_type 3 1455 0 292 336 95 33 chr10 30034724 30034998 -110281767 - L2 LINE L2 -24 3289 2999 277 200 42 25 chr10 30035130 30035250 -110281515 + (TTATA)n Simple_repeat Simple_repeat 1 122 0 668 132 0 0 chr10 30035267 30035358 -110281407 + AluS SINE Alu 1 91 -221 31 68 0 0 chr10 30035358 30035417 -110281348 + AT_rich Low_complexity Low_complexity 1 59 0 224 130 22 0 chr10 30035423 30035469 -110281296 + (TATAA)n Simple_repeat Simple_repeat 5 51 0 2241 118 3 0 chr10 30036286 30036591 -110280174 + AluSx SINE Alu 1 306 -6 25 31 0 0 chr10 30036645 30036677 -110280088 + AT_rich Low_complexity Low_complexity 1 32 0 1933 157 0 25 chr10 30037902 30038221 -110278544 + AluJb SINE Alu 1 311 -1 4332 235 43 19 chr10 30038221 30040065 -110276700 + L1MCa LINE L1 2180 4069 -2357 2900 170 34 80 chr10 30040165 30040937 -110275828 + L1MB8 LINE L1 5437 6172 -6 382 211 11 0 chr10 30041009 30041104 -110275661 + MER53 DNA DNA 94 189 0 2136 118 3 0 chr10 30041169 30041466 -110275299 + AluSx SINE Alu 1 298 -14 252 338 35 98 chr10 30041836 30042151 -110274614 + L2 LINE L2 2697 2956 -316 2383 107 0 0 chr10 30042151 30042451 -110274314 - AluSx SINE Alu -12 300 1 252 338 35 98 chr10 30042451 30042732 -110274033 + L2 LINE L2 2956 3253 -19 782 119 16 0 chr10 30042765 30042891 -110273874 + L1MA3 LINE L1 6178 6305 0 2081 131 10 10 chr10 30043263 30043576 -110273189 + AluSq SINE Alu 1 313 0 1754 154 33 27 chr10 30043922 30044252 -110272513 - THE1B LTR MaLR -32 332 1 379 310 108 6 chr10 30044620 30044778 -110271987 + MIR SINE MIR 14 187 -75 35 0 0 0 chr10 30045667 30045702 -110271063 + AT_rich Low_complexity Low_complexity 1 35 0 1213 73 0 0 chr10 30047364 30047514 -110269251 - AluSc SINE Alu -4 305 156 384 256 107 48 chr10 30048234 30048523 -110268242 - L1M4 LINE L1 -813 5333 5028 253 231 13 26 chr10 30048530 30048608 -110268157 - MER116 DNA Mariner -3 77 1 351 217 74 69 chr10 30048614 30048789 -110267976 - HAL1 LINE L1 -32 2475 2300 963 260 110 31 chr10 30048794 30049148 -110267617 - L2 LINE L2 -16 3297 2916 182 143 0 29 chr10 30049310 30049345 -110267420 - L2 LINE L2 -364 2949 2916 1553 250 150 31 chr10 30049411 30049990 -110266775 - L2 LINE L2 -363 2951 2304 884 166 33 13 chr10 30050237 30050388 -110266377 + FRAM SINE Alu 2 155 -11 2377 95 3 0 chr10 30051113 30051419 -110265346 + AluSp SINE Alu 1 307 -6 2402 92 3 0 chr10 30051774 30052079 -110264686 - AluSx SINE Alu -6 306 1 1537 212 13 13 chr10 30052266 30052573 -110264192 - AluJo SINE Alu -1 311 5 530 168 25 17 chr10 30052575 30052694 -110264071 - MLT1D LTR MaLR -385 120 1 1107 134 36 62 chr10 30052851 30053037 -110263728 - L1PB4 LINE L1 -2 6154 5973 1142 99 204 0 chr10 30053037 30053228 -110263537 + MER30 DNA MER1_type 1 230 0 1107 134 36 62 chr10 30053228 30053265 -110263500 - L1PB4 LINE L1 -183 5973 5937 251 309 96 51 chr10 30053533 30053866 -110262899 + L2 LINE L2 2088 2435 -879 1840 78 142 15 chr10 30053887 30054155 -110262610 - AluSx SINE Alu -10 302 1 661 306 177 8 chr10 30054232 30054683 -110262082 - L2 LINE L2 0 3313 2787 932 193 29 19 chr10 30054730 30054937 -110261828 + MLT1D LTR MaLR 37 245 -260 249 83 0 0 chr10 30054937 30054973 -110261792 + (GA)n Simple_repeat Simple_repeat 1 36 0 433 282 7 35 chr10 30055000 30055190 -110261575 - MLT1E LTR MaLR -379 188 1 1778 145 48 7 chr10 30055934 30056223 -110260542 - AluSx SINE Alu -11 301 1 533 123 9 26 chr10 30056536 30056650 -110260115 + (TCC)n Simple_repeat Simple_repeat 3 114 0 1121 240 47 8 chr10 30056656 30056792 -110259973 - AluJo SINE Alu -44 268 139 183 80 0 0 chr10 30056792 30056817 -110259948 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1121 240 47 8 chr10 30056817 30056938 -110259827 - AluJo SINE Alu -173 139 1 700 200 32 0 chr10 30056940 30057065 -110259700 - FLAM_A SINE Alu -4 129 1 526 313 42 17 chr10 30057077 30057317 -110259448 - MIR SINE MIR -15 247 2 2432 96 0 0 chr10 30057693 30058006 -110258759 - AluSq SINE Alu 0 313 1 554 207 179 0 chr10 30058596 30058736 -110258029 + MER5A DNA MER1_type 25 189 0 656 254 53 16 chr10 30059342 30059531 -110257234 + MIR SINE MIR 19 214 -48 278 221 29 48 chr10 30059658 30059762 -110257003 + L1ME1 LINE L1 926 1027 -5092 38 51 0 0 chr10 30059775 30059834 -110256931 + AT_rich Low_complexity Low_complexity 1 59 0 871 172 0 14 chr10 30059945 30060090 -110256675 + FLAM_C SINE Alu 1 143 0 242 274 20 29 chr10 30060092 30060194 -110256571 + L1ME1 LINE L1 1155 1255 -4864 247 200 18 0 chr10 30060194 30060249 -110256516 + (CATATA)n Simple_repeat Simple_repeat 1 56 0 706 305 92 23 chr10 30060345 30060867 -110255898 + L1ME1 LINE L1 3985 4542 -1587 1058 199 13 101 chr10 30060886 30061203 -110255562 - AluJo SINE Alu -12 290 2 278 284 168 39 chr10 30062235 30062520 -110254245 + MLT1H LTR MaLR 124 445 -104 263 325 42 8 chr10 30062817 30062937 -110253828 + MIR SINE MIR 50 173 -89 1867 150 0 7 chr10 30063070 30063406 -110253359 + AluJb SINE Alu 1 334 0 2115 114 0 0 chr10 30063703 30064008 -110252757 + AluSx SINE Alu 1 305 0 29 70 0 0 chr10 30064150 30064207 -110252558 + AT_rich Low_complexity Low_complexity 1 57 0 252 0 0 0 chr10 30064546 30064574 -110252191 + (A)n Simple_repeat Simple_repeat 1 28 0 2202 157 24 19 chr10 30064753 30065173 -110251592 + MSTB2 LTR MaLR 34 455 -2 533 291 80 22 chr10 30065207 30065571 -110251194 + L1ME1 LINE L1 4865 5249 -880 1279 284 67 26 chr10 30065571 30066067 -110250698 - MLT1E2 LTR MaLR 0 626 111 1938 254 51 59 chr10 30066085 30066124 -110250641 + L1ME1 LINE L1 5245 5283 -866 2159 79 10 3 chr10 30066124 30066415 -110250350 - AluY SINE Alu -18 293 1 1938 254 51 59 chr10 30066415 30067277 -110249488 + L1ME1 LINE L1 5283 6139 -10 2347 57 3 20 chr10 30067277 30067573 -110249192 + AluY SINE Alu 13 303 -8 510 289 68 44 chr10 30067612 30067906 -110248859 - L1MEc LINE L1 -4358 2038 1738 23 33 0 0 chr10 30068169 30068199 -110248566 + AT_rich Low_complexity Low_complexity 1 30 0 2354 103 0 0 chr10 30068999 30069299 -110247466 - AluSq SINE Alu -13 300 1 1590 140 76 73 chr10 30069384 30069726 -110247039 - MER2 DNA MER2_type -1 343 1 1722 168 0 26 chr10 30070289 30070592 -110246173 - AluJb SINE Alu -17 295 1 2327 111 0 6 chr10 30071144 30071459 -110245306 - AluSq SINE Alu 0 313 1 212 245 41 20 chr10 30071791 30071840 -110244925 - L3 LINE CR1 -11 1566 1517 436 259 75 14 chr10 30072103 30072250 -110244515 + MIR SINE MIR 102 257 -5 1101 163 0 11 chr10 30072505 30072683 -110244082 + AluSg/x SINE Alu 121 296 -14 350 224 0 9 chr10 30072864 30072971 -110243794 + (TA)n Simple_repeat Simple_repeat 2 107 0 2624 110 36 0 chr10 30073234 30073651 -110243114 - LTR3b LTR ERVK -68 432 1 225 108 0 0 chr10 30073708 30073745 -110243020 + (CA)n Simple_repeat Simple_repeat 2 38 0 389 272 41 14 chr10 30073780 30073927 -110242838 + MIR SINE MIR 110 260 -2 21 0 0 0 chr10 30074012 30074033 -110242732 + AT_rich Low_complexity Low_complexity 1 21 0 2076 130 3 3 chr10 30074424 30074725 -110242040 + AluSx SINE Alu 1 301 -11 1322 151 72 34 chr10 30075649 30075940 -110240825 - THE1C LTR MaLR -73 302 1 2271 65 14 0 chr10 30076599 30076915 -110239850 - AluY SINE Alu 0 320 1 530 364 65 32 chr10 30077183 30077647 -110239118 + L2 LINE L2 340 818 -2496 596 211 65 16 chr10 30077668 30077791 -110238974 + FLAM_C SINE Alu 3 131 -12 330 365 34 24 chr10 30077852 30078060 -110238705 + L2 LINE L2 912 1121 -2193 23 0 0 0 chr10 30079585 30079608 -110237157 + AT_rich Low_complexity Low_complexity 1 23 0 1430 36 0 0 chr10 30079646 30079812 -110236953 + AluY SINE Alu 146 311 0 28 29 0 0 chr10 30080344 30080379 -110236386 + AT_rich Low_complexity Low_complexity 1 35 0 1679 84 0 5 chr10 30080988 30081202 -110235563 + AluSg SINE Alu 1 213 -97 3548 134 44 25 chr10 30082799 30082983 -110233782 + Tigger3b DNA MER2_type 21 200 -2828 1737 121 3 25 chr10 30082983 30083086 -110233679 + AluSg SINE Alu 32 136 -174 2386 31 41 10 chr10 30083086 30083378 -110233387 + AluY SINE Alu 1 301 -10 1737 121 3 25 chr10 30083378 30083556 -110233209 + AluSg SINE Alu 136 307 -3 3548 134 44 25 chr10 30083556 30084048 -110232717 + Tigger3b DNA MER2_type 200 710 -521 1940 155 0 3 chr10 30084984 30085280 -110231485 + AluJo SINE Alu 1 295 -17 226 0 29 29 chr10 30085927 30085962 -110230803 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2160 103 7 7 chr10 30085965 30086257 -110230508 - AluSq SINE Alu -21 292 1 21 0 0 0 chr10 30087010 30087031 -110229734 + AT_rich Low_complexity Low_complexity 1 21 0 1054 284 100 14 chr10 30087871 30088832 -110227933 + L1ME3A LINE L1 5106 6165 -5 206 321 110 28 chr10 30088838 30089056 -110227709 - L2 LINE L2 -81 3232 2997 * 533 288 119 43 chr10 30089041 30089319 -110227446 - L2 LINE L2 -447 2867 2569 561 200 0 9 chr10 30089339 30089449 -110227316 - MER58A DNA MER1_type 0 152 44 2190 114 0 3 chr10 30089496 30089793 -110226972 + AluSg1 SINE Alu 6 301 -8 842 205 6 0 chr10 30089793 30089949 -110226816 + AluJo/FRAM SINE Alu 135 291 -21 27 73 0 0 chr10 30090623 30090678 -110226087 + AT_rich Low_complexity Low_complexity 1 55 0 32 0 0 0 chr10 30092211 30092243 -110224522 + AT_rich Low_complexity Low_complexity 1 32 0 2464 76 0 25 chr10 30093054 30093371 -110223394 + AluY SINE Alu 1 309 -2 23 33 0 0 chr10 30093430 30093460 -110223305 + AT_rich Low_complexity Low_complexity 1 30 0 516 265 27 7 chr10 30093916 30094063 -110222702 + MIR SINE MIR 63 212 -50 2275 115 3 13 chr10 30094066 30094378 -110222387 + AluSx SINE Alu 1 309 -3 406 371 105 3 chr10 30094681 30094994 -110221771 + L1MB8 LINE L1 4821 5165 -981 2334 246 68 26 chr10 30145022 30145602 -110171163 - L1MEc LINE L1 -3655 2560 2005 1960 139 0 25 chr10 30145602 30145918 -110170847 - AluJb SINE Alu -4 308 1 2334 246 68 26 chr10 30145918 30146524 -110170241 - L1MEc LINE L1 -4210 2005 1428 8733 214 57 32 chr10 30147251 30147366 -110169399 + L1MC2 LINE L1 2065 2176 -4448 1449 199 0 25 chr10 30147366 30147683 -110169082 + AluJb SINE Alu 1 309 -3 8733 214 57 32 chr10 30147683 30149524 -110167241 + L1MC2 LINE L1 2176 3970 -2654 1058 153 8 111 chr10 30149524 30149785 -110166980 + MER46A DNA MER2_type 1 234 -2 8733 214 57 32 chr10 30149785 30149926 -110166839 + L1MC2 LINE L1 3970 4106 -2518 1590 134 0 0 chr10 30149926 30150142 -110166623 + AluSx SINE Alu 1 216 -96 260 167 0 0 chr10 30150142 30150184 -110166581 + AluSx SINE Alu 255 296 -6 8733 214 57 32 chr10 30150184 30151293 -110165472 + L1MC2 LINE L1 4106 5186 -1438 2354 83 3 0 chr10 30151293 30151595 -110165170 - AluY SINE Alu -8 303 1 8733 214 57 32 chr10 30151595 30152081 -110164684 + L1MC2 LINE L1 5186 5659 -965 2236 112 0 16 chr10 30152081 30152395 -110164370 - AluSg SINE Alu -1 309 1 8733 214 57 32 chr10 30152395 30153128 -110163637 + L1MC2 LINE L1 5659 6615 -9 4031 168 19 72 chr10 30153130 30154048 -110162717 + L1MB8 LINE L1 5304 6172 -6 411 211 11 0 chr10 30154120 30154215 -110162550 + MER53 DNA DNA 94 189 0 2131 117 3 0 chr10 30154280 30154578 -110162187 + AluSx SINE Alu 1 299 -13 226 338 35 98 chr10 30154948 30155263 -110161502 + L2 LINE L2 2697 2956 -316 2321 113 0 0 chr10 30155263 30155564 -110161201 - AluSx SINE Alu -11 301 1 226 338 35 98 chr10 30155564 30155845 -110160920 + L2 LINE L2 2956 3253 -19 791 119 16 0 chr10 30155878 30156004 -110160761 + L1MA3 LINE L1 6178 6305 0 2031 132 10 10 chr10 30156376 30156687 -110160078 + AluSq SINE Alu 1 311 -2 1813 146 76 29 chr10 30157019 30157366 -110159399 - THE1B LTR MaLR 0 428 1 1162 200 157 16 chr10 30157699 30157954 -110158811 - AluJb SINE Alu -11 291 1 234 0 0 0 chr10 30157961 30157987 -110158778 + (CA)n Simple_repeat Simple_repeat 2 27 0 228 274 55 14 chr10 30158814 30158887 -110157878 - MIR SINE MIR -71 191 116 180 0 0 0 chr10 30161578 30161598 -110155167 + (A)n Simple_repeat Simple_repeat 1 20 0 321 214 119 12 chr10 30161944 30162028 -110154737 + MIR SINE MIR 157 249 -13 802 180 102 90 chr10 30162211 30162242 -110154523 + L1MD2 LINE L1 6101 6130 -229 2249 123 0 0 chr10 30162242 30162543 -110154222 + AluSx SINE Alu 1 301 -11 802 180 102 90 chr10 30162543 30162767 -110153998 + L1MD2 LINE L1 6130 6359 0 194 324 0 14 chr10 30162781 30162855 -110153910 + MIR SINE MIR 170 242 -20 28 29 0 0 chr10 30163045 30163080 -110153685 + AT_rich Low_complexity Low_complexity 1 35 0 253 331 81 69 chr10 30163615 30163875 -110152890 - L2 LINE L2 0 3272 3010 1841 166 134 6 chr10 30163875 30164225 -110152540 + MSTD LTR MaLR 1 395 -1 235 376 68 8 chr10 30164250 30164367 -110152398 - L2 LINE L2 -12 3260 3137 24 67 0 0 chr10 30164689 30164734 -110152031 + AT_rich Low_complexity Low_complexity 1 45 0 1703 157 42 26 chr10 30165496 30165802 -110150963 + AluJo SINE Alu 1 311 -1 522 224 66 28 chr10 30166018 30166232 -110150533 - LTR41 LTR ERVL 0 795 556 959 182 19 25 chr10 30166664 30166875 -110149890 - LTR41 LTR ERVL -558 237 1 2058 153 97 8 chr10 30166913 30167306 -110149459 + MSTA LTR MaLR 1 428 0 382 198 12 0 chr10 30167306 30167392 -110149373 + AluJo SINE Alu 43 129 -173 1047 164 0 12 chr10 30167402 30167567 -110149198 + AluJo SINE Alu 137 299 -3 2578 164 7 55 chr10 30167847 30168345 -110148420 + MLT2B2 LTR ERVL 1 379 -35 416 116 101 0 chr10 30168353 30168422 -110148343 + MADE1 DNA Mariner 5 80 0 230 91 23 23 chr10 30168464 30168508 -110148257 + MLT2B2 LTR ERVL 466 504 -11 1012 170 0 0 chr10 30169184 30169343 -110147422 - FRAM SINE Alu -6 160 2 609 260 65 25 chr10 30169849 30170049 -110146716 - L2 LINE L2 -418 2896 2689 968 158 18 6 chr10 30170049 30170213 -110146552 + AluJ SINE Alu 136 301 -11 1693 290 174 12 chr10 30170221 30171021 -110145744 - L2 LINE L2 -612 2702 1774 1345 199 8 8 chr10 30171029 30171285 -110145480 - AluJo SINE Alu -20 292 37 581 247 145 49 chr10 30171288 30171592 -110145173 - L2 LINE L2 -1659 1655 1323 2139 111 14 10 chr10 30171594 30171891 -110144874 + AluSg SINE Alu 1 298 -12 189 0 0 0 chr10 30171891 30171912 -110144853 + (GA)n Simple_repeat Simple_repeat 2 22 0 3241 155 20 79 chr10 30172676 30173410 -110143355 + LTR8 LTR ERV1 1 691 0 271 293 105 23 chr10 30173582 30173715 -110143050 - L2 LINE L2 -259 3054 2911 502 292 146 0 chr10 30173728 30173906 -110142859 + MIR SINE MIR 24 227 -35 715 164 0 45 chr10 30174171 30174305 -110142460 + AluJo SINE Alu 1 128 -174 595 143 10 0 chr10 30174305 30174403 -110142362 + AluJo SINE Alu 190 288 -24 2140 130 7 0 chr10 30175330 30175638 -110141127 + AluSx SINE Alu 3 312 0 21 0 0 0 chr10 30176858 30176879 -110139886 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr10 30177866 30177894 -110138871 + AT_rich Low_complexity Low_complexity 1 28 0 1721 143 50 17 chr10 30180296 30180596 -110136169 + AluJb SINE Alu 1 310 -2 2349 68 10 0 chr10 30180654 30180946 -110135819 + AluY SINE Alu 1 295 -16 1606 82 0 5 chr10 30181017 30181225 -110135540 + AluSg/x SINE Alu 87 293 -19 2150 107 38 0 chr10 30181994 30182285 -110134480 + AluSx SINE Alu 1 302 -10 37 23 0 0 chr10 30182939 30182983 -110133782 + AT_rich Low_complexity Low_complexity 1 44 0 1949 209 32 4 chr10 30183170 30183900 -110132865 + L1MB4 LINE L1 4907 5649 -531 2409 188 4 31 chr10 30183965 30184338 -110132427 + L1MB4 LINE L1 5643 5998 -182 2097 108 24 0 chr10 30184338 30184626 -110132139 - AluSx SINE Alu -17 295 1 2409 188 4 31 chr10 30184626 30184805 -110131960 + L1MB4 LINE L1 5998 6180 0 5300 90 0 6 chr10 30185388 30186100 -110130665 - L1PA10 LINE L1 -5 6163 5456 2341 98 16 0 chr10 30186564 30186871 -110129894 + AluSx SINE Alu 1 312 0 435 291 79 58 chr10 30186890 30187688 -110129077 + L1MC/D LINE L1 921 1818 -4492 2610 55 0 0 chr10 30187688 30187996 -110128769 + AluY SINE Alu 1 308 -3 435 291 79 58 chr10 30187996 30188508 -110128257 + L1MC/D LINE L1 1818 2318 -3992 2084 102 3 11 chr10 30188612 30188924 -110127841 + AluSx SINE Alu 1 310 0 1707 292 127 19 chr10 30188924 30190147 -110126618 + L1MC/D LINE L1 2475 3829 -2300 1682 151 32 21 chr10 30190153 30190432 -110126333 + AluJo SINE Alu 1 282 -30 297 0 0 0 chr10 30190437 30190470 -110126295 + (CA)n Simple_repeat Simple_repeat 2 34 0 639 232 141 9 chr10 30190492 30190712 -110126053 + MER69 DNA AcHobo 2178 2426 -100 1605 151 94 39 chr10 30191173 30191504 -110125261 + L1MC3 LINE L1 6343 6691 -1094 2397 63 0 35 chr10 30191504 30191822 -110124943 + AluY SINE Alu 1 307 -4 830 157 8 0 chr10 30191833 30191967 -110124798 + AluJo SINE Alu 1 135 -177 227 232 9 36 chr10 30191967 30192079 -110124686 + A-rich Low_complexity Low_complexity 1 109 0 4952 180 38 31 chr10 30192092 30192866 -110123899 + L1MC3 LINE L1 6675 7460 -325 1747 156 11 4 chr10 30192866 30193184 -110123581 - AluJb SINE Alu 0 323 4 4952 180 38 31 chr10 30193184 30193491 -110123274 + L1MC3 LINE L1 7460 7764 -21 428 295 100 39 chr10 30193601 30194264 -110122501 + L1MC/D LINE L1 4871 5565 -751 2133 118 0 6 chr10 30197211 30197525 -110119240 - AluSx SINE Alu 0 312 1 516 327 161 0 chr10 30197806 30198029 -110118736 + MIR SINE MIR 2 260 -2 182 203 0 17 chr10 30198993 30199052 -110117713 + (TATG)n Simple_repeat Simple_repeat 3 60 0 4225 184 93 93 chr10 30200632 30202086 -110114679 + Charlie1a DNA MER1_type 1 1454 -1 477 205 40 3 chr10 30202096 30202246 -110114519 - MER58B DNA MER1_type 0 341 30 297 333 29 9 chr10 30203551 30203656 -110113109 + MIR SINE MIR 1 107 -155 633 90 0 0 chr10 30203740 30203818 -110112947 - AluSp/q SINE Alu -19 294 217 2983 233 76 9 chr10 30203818 30204677 -110112088 + L1M4c LINE L1 974 1889 -4495 1039 188 38 61 chr10 30204687 30204948 -110111817 - THE1B LTR MaLR -109 255 1 488 248 198 13 chr10 30204974 30205131 -110111634 + MLT1I LTR MaLR 224 409 0 1812 181 49 0 chr10 30206712 30207038 -110109727 + MER7A DNA MER2_type 6 345 -1 414 198 28 38 chr10 30207052 30207158 -110109607 + L2 LINE L2 3209 3313 0 35 0 0 0 chr10 30207206 30207241 -110109524 + AT_rich Low_complexity Low_complexity 1 35 0 2055 109 14 0 chr10 30207385 30207660 -110109105 + AluSx SINE Alu 1 279 -33 428 309 69 5 chr10 30208258 30208462 -110108303 + L1MC4 LINE L1 7814 8030 -12 2058 122 11 0 chr10 30209261 30209573 -110107192 + AluSx SINE Alu 1 315 0 229 243 43 0 chr10 30209583 30209653 -110107112 + L1ME LINE L1 5606 5678 -443 746 175 0 17 chr10 30209854 30209974 -110106791 + FLAM_A SINE Alu 1 118 -15 2047 120 0 27 chr10 30210983 30211284 -110105481 - AluSg SINE Alu -17 293 1 2199 128 0 0 chr10 30211792 30212104 -110104661 + AluSx SINE Alu 1 312 0 1976 95 19 4 chr10 30213225 30213488 -110103277 - AluSx SINE Alu -45 267 1 2050 120 34 0 chr10 30213492 30213783 -110102982 - AluSg SINE Alu -9 301 1 238 295 36 22 chr10 30214497 30214636 -110102129 + L1MC/D LINE L1 5626 5766 -2042 197 325 231 26 chr10 30214898 30215015 -110101750 + L2 LINE L2 3132 3272 0 3141 17 0 6 chr10 30215490 30215837 -110100928 + L1PA2 LINE L1 5811 6155 0 216 0 0 0 chr10 30216461 30216485 -110100280 + (TA)n Simple_repeat Simple_repeat 1 24 0 2201 120 0 0 chr10 30216487 30216778 -110099987 - AluSx SINE Alu -21 291 1 28 0 0 0 chr10 30216778 30216806 -110099959 + AT_rich Low_complexity Low_complexity 1 28 0 214 348 241 0 chr10 30216847 30216959 -110099806 - L2 LINE L2 -8 3264 3126 1850 144 7 26 chr10 30217375 30217680 -110099085 + AluSx SINE Alu 1 299 -13 1760 158 0 14 chr10 30217775 30218059 -110098706 + AluJb SINE Alu 1 280 -32 2171 125 13 0 chr10 30218570 30218873 -110097892 + AluSx SINE Alu 1 307 -5 817 142 0 9 chr10 30219843 30219956 -110096809 + AluJo/FLAM SINE Alu 2 113 -199 2242 88 3 3 chr10 30219958 30220264 -110096501 + AluSx SINE Alu 13 318 0 825 40 0 0 chr10 30220264 30220365 -110096400 + (TA)n Simple_repeat Simple_repeat 2 102 0 813 87 0 0 chr10 30220378 30220482 -110096283 - AluSc SINE Alu -205 104 1 2207 120 0 0 chr10 30220860 30221169 -110095596 + AluSx SINE Alu 1 309 -3 1692 156 29 7 chr10 30222101 30222377 -110094388 + AluJo SINE Alu 1 282 -30 29 0 0 0 chr10 30222660 30222689 -110094076 + AT_rich Low_complexity Low_complexity 1 29 0 256 191 59 29 chr10 30222955 30223023 -110093742 - L2 LINE L2 -1288 2026 1957 1809 174 0 0 chr10 30223364 30223645 -110093120 + AluJb SINE Alu 2 282 -30 1979 98 36 7 chr10 30224047 30224346 -110092419 - AluSx SINE Alu 0 307 1 212 282 155 0 chr10 30224366 30224437 -110092328 - MIR SINE MIR -150 112 31 851 120 0 8 chr10 30224556 30224681 -110092084 + FRAM SINE Alu 47 170 -6 228 311 98 23 chr10 30224863 30224995 -110091770 + L2 LINE L2 3161 3302 -11 933 249 61 9 chr10 30225145 30225358 -110091407 + MER58A DNA MER1_type 1 224 0 487 270 66 135 chr10 30225372 30225555 -110091210 - L2 LINE L2 0 3313 3119 1373 110 75 35 chr10 30225555 30225782 -110090983 + MER46A DNA MER2_type 1 236 0 487 270 66 135 chr10 30225782 30225841 -110090924 - L2 LINE L2 -194 3119 3058 1599 186 3 10 chr10 30225841 30226131 -110090634 + AluJb SINE Alu 1 288 -24 207 0 0 0 chr10 30226134 30226157 -110090608 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 487 270 66 135 chr10 30226157 30226500 -110090265 - L2 LINE L2 -257 3056 2769 2184 117 0 10 chr10 30226537 30226837 -110089928 + AluSx SINE Alu 1 297 -15 1323 93 0 0 chr10 30226858 30227030 -110089735 + AluY SINE Alu 134 305 -6 1755 138 4 14 chr10 30227601 30227877 -110088888 - AluJo SINE Alu -1 311 39 204 192 0 58 chr10 30228475 30228493 -110088272 + G-rich Low_complexity Low_complexity 6 23 -31 779 181 8 0 chr10 30228493 30228620 -110088145 + FLAM_A SINE Alu 1 128 -5 204 192 0 58 chr10 30228620 30228653 -110088112 + G-rich Low_complexity Low_complexity 23 54 0 2242 103 0 7 chr10 30229781 30230081 -110086684 + AluSc SINE Alu 1 298 -11 441 187 44 0 chr10 30230389 30230480 -110086285 + L1ME3A LINE L1 6064 6158 -12 2300 106 3 3 chr10 30230993 30231305 -110085460 - AluSx SINE Alu 0 312 1 848 264 24 0 chr10 30231938 30232150 -110084615 + AluJo SINE Alu 4 220 -92 2547 59 10 0 chr10 30232181 30232486 -110084279 - AluY SINE Alu -3 308 1 21 36 0 0 chr10 30232486 30232514 -110084251 + AT_rich Low_complexity Low_complexity 1 28 0 629 316 65 37 chr10 30233202 30233494 -110083271 + L2 LINE L2 2227 2534 -780 2234 117 0 0 chr10 30233494 30233794 -110082971 - AluSx SINE Alu -12 300 1 629 316 65 37 chr10 30233794 30233903 -110082862 + L2 LINE L2 2534 2639 -675 2548 70 0 0 chr10 30234118 30234418 -110082347 - AluSx SINE Alu -12 300 1 218 212 59 119 chr10 30234947 30234998 -110081767 - MIR SINE MIR -32 230 178 1630 167 36 14 chr10 30234998 30235274 -110081491 + AluJb SINE Alu 1 282 -30 180 0 0 0 chr10 30235276 30235296 -110081469 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 218 212 59 119 chr10 30235296 30235359 -110081406 - MIR SINE MIR -85 177 120 1405 87 12 127 chr10 30235359 30235611 -110081154 + MER30 DNA MER1_type 8 230 0 21 36 0 0 chr10 30236134 30236162 -110080603 + AT_rich Low_complexity Low_complexity 1 28 0 1932 109 87 0 chr10 30237534 30237810 -110078955 + AluSx SINE Alu 1 300 -12 1872 173 56 0 chr10 30238311 30238635 -110078130 + MER2 DNA MER2_type 1 342 -2 2161 128 0 28 chr10 30239156 30239476 -110077289 - AluSx SINE Alu -1 311 1 804 302 20 8 chr10 30239712 30239960 -110076805 - MIR SINE MIR 0 262 12 447 304 99 31 chr10 30241359 30241550 -110075215 + MIR SINE MIR 47 250 -12 2278 102 0 0 chr10 30241607 30241902 -110074863 - AluSx SINE Alu -17 295 1 1107 193 72 77 chr10 30243194 30243277 -110073488 + L1MC5 LINE L1 6984 7066 -895 2251 102 3 3 chr10 30243277 30243572 -110073193 - AluSp SINE Alu -18 295 1 1107 193 72 77 chr10 30243572 30243892 -110072873 + L1MC5 LINE L1 7066 7385 -576 21 0 0 0 chr10 30243933 30243954 -110072811 + AT_rich Low_complexity Low_complexity 1 21 0 2360 96 0 6 chr10 30244151 30244463 -110072302 + AluY SINE Alu 2 311 0 2672 221 38 32 chr10 30244659 30245351 -110071414 + Charlie1a DNA MER1_type 1 696 -759 783 113 20 67 chr10 30245359 30245509 -110071256 + L1MA10 LINE L1 6090 6232 -102 535 183 250 12 chr10 30245519 30245683 -110071082 - Charlie1 DNA MER1_type -497 2264 2062 587 133 0 0 chr10 30245689 30245779 -110070986 + L1MA10 LINE L1 6235 6324 -10 3075 170 92 27 chr10 30245788 30246331 -110070434 + Charlie1 DNA MER1_type 2007 2608 -153 2018 148 0 3 chr10 30246331 30246628 -110070137 - AluJb SINE Alu -16 296 1 3075 170 92 27 chr10 30246628 30246791 -110069974 + Charlie1 DNA MER1_type 2608 2759 -2 2306 101 0 3 chr10 30247105 30247402 -110069363 + AluSx SINE Alu 1 296 -16 319 278 189 39 chr10 30247694 30247874 -110068891 - L2 LINE L2 -516 2798 2592 1909 173 0 0 chr10 30247905 30248206 -110068559 - AluSx SINE Alu -11 301 1 281 247 86 74 chr10 30248382 30248544 -110068221 - L1MC5 LINE L1 -30 7931 7768 2170 123 0 3 chr10 30248559 30248860 -110067905 - AluSq SINE Alu -13 300 1 1928 117 3 27 chr10 30249411 30249711 -110067054 + AluSx SINE Alu 1 293 -19 3845 124 116 9 chr10 30249718 30250402 -110066363 + Tigger3(Golem) DNA MER2_type 2272 3028 -1 475 263 53 29 chr10 30250591 30250762 -110066003 - MER5B DNA MER1_type -1 177 3 230 258 19 126 chr10 30251378 30251537 -110065228 + L1ME LINE L1 5378 5519 -645 367 301 123 21 chr10 30251793 30252029 -110064736 - L2 LINE L2 -5 3308 3049 1876 80 52 52 chr10 30252113 30252402 -110064363 + AluY SINE Alu 1 289 -22 593 230 182 10 chr10 30252838 30253047 -110063718 - MIR SINE MIR -10 252 8 673 261 11 27 chr10 30253057 30253241 -110063524 + MER5A DNA MER1_type 9 189 0 14842 125 41 6 chr10 30255167 30255504 -110061261 - Tigger1 DNA MER2_type -1 2417 2093 2197 114 3 3 chr10 30255504 30255802 -110060963 + AluSx SINE Alu 1 298 -14 14842 125 41 6 chr10 30255802 30257766 -110058999 - Tigger1 DNA MER2_type -325 2093 34 2512 57 0 7 chr10 30257854 30258154 -110058611 - AluY SINE Alu -13 298 1 2022 105 41 27 chr10 30258757 30259052 -110057713 + AluSx SINE Alu 1 299 -13 23 0 0 0 chr10 30260658 30260681 -110056084 + GC_rich Low_complexity Low_complexity 1 23 0 27 49 0 0 chr10 30260722 30260763 -110056002 + GC_rich Low_complexity Low_complexity 1 41 0 194 310 0 0 chr10 30262965 30263023 -110053742 - L2 LINE L2 -32 3240 3183 231 310 140 6 chr10 30263237 30263408 -110053357 - L2 LINE L2 -350 2964 2771 1593 196 11 0 chr10 30264465 30264740 -110052025 + AluJo SINE Alu 10 287 -25 401 89 59 15 chr10 30264740 30264875 -110051890 + (TAGA)n Simple_repeat Simple_repeat 1 141 0 1270 139 0 0 chr10 30266725 30266905 -110049860 + FRAM SINE Alu 1 175 -1 1102 194 144 92 chr10 30267036 30267289 -110049476 + LTR65 LTR ERV1 182 420 -249 1878 97 0 0 chr10 30267289 30267527 -110049238 + AluSx SINE Alu 60 297 -15 1102 194 144 92 chr10 30267527 30267731 -110049034 + LTR65 LTR ERV1 420 663 -6 2039 169 61 17 chr10 30267746 30268089 -110048676 + MSTB LTR MaLR 1 366 -60 2409 96 0 0 chr10 30268089 30268391 -110048374 - AluSx SINE Alu -10 302 1 2039 169 61 17 chr10 30268391 30268455 -110048310 + MSTB LTR MaLR 366 426 0 532 90 0 13 chr10 30268947 30269025 -110047740 - MADE1 DNA Mariner -3 77 1 243 320 100 0 chr10 30269076 30269176 -110047589 + L2 LINE L2 3154 3263 -9 846 170 7 0 chr10 30269690 30269825 -110046940 + AluJo SINE Alu 1 136 -176 273 29 0 0 chr10 30269849 30269883 -110046882 + (CA)n Simple_repeat Simple_repeat 2 35 0 413 161 138 11 chr10 30270069 30270156 -110046609 - LTR12 LTR ERV1 0 714 617 291 218 69 0 chr10 30270156 30270243 -110046522 - LTR30 LTR ERV1 -70 652 560 338 193 72 12 chr10 30270244 30270327 -110046438 - LTR12 LTR ERV1 -422 292 205 1269 126 42 59 chr10 30270366 30270604 -110046161 - LTR12 LTR ERV1 -480 234 1 2208 127 0 9 chr10 30271315 30271630 -110045135 + AluSx SINE Alu 1 312 0 1789 154 3 40 chr10 30271790 30272089 -110044676 - AluJb SINE Alu -23 289 2 462 186 24 89 chr10 30272249 30272373 -110044392 - L2 LINE L2 -2 3270 3155 299 175 35 0 chr10 30272851 30272908 -110043857 + MER102a DNA MER1_type 53 111 -219 1697 190 13 10 chr10 30272950 30273261 -110043504 + AluJo SINE Alu 1 312 0 848 141 5 32 chr10 30273275 30273460 -110043305 + GA-rich Low_complexity Low_complexity 1 180 0 302 265 43 43 chr10 30273481 30273643 -110043122 + MER102a DNA MER1_type 169 330 0 328 98 39 0 chr10 30273731 30273782 -110042983 + L1MC3 LINE L1 7045 7097 -688 277 259 24 0 chr10 30273783 30273868 -110042897 + MLT1F1 LTR MaLR 36 122 -445 2691 161 89 47 chr10 30273870 30274239 -110042526 + L1MC3 LINE L1 7187 7590 -195 2289 113 7 0 chr10 30274239 30274548 -110042217 + AluSx SINE Alu 1 311 -1 2691 161 89 47 chr10 30274548 30274750 -110042015 + L1MC3 LINE L1 7590 7782 -3 1741 177 0 23 chr10 30275321 30275626 -110041139 + AluJo SINE Alu 1 298 -14 305 243 14 0 chr10 30275882 30275952 -110040813 - MER91B DNA MER1_type -26 164 94 490 180 72 18 chr10 30275973 30276084 -110040681 - MER91B DNA MER1_type -60 130 14 362 286 21 7 chr10 30276282 30276422 -110040343 + MIR SINE MIR 121 262 0 2039 148 3 3 chr10 30276479 30276782 -110039983 + AluSx SINE Alu 1 303 -9 2378 108 129 5 chr10 30277061 30277442 -110039323 - MSTA LTR MaLR 0 428 1 1074 123 0 7 chr10 30277475 30277621 -110039144 + AluJo SINE Alu 6 150 -162 1629 156 76 4 chr10 30277769 30278045 -110038720 + AluSx SINE Alu 1 296 -16 30 0 0 0 chr10 30278562 30278592 -110038173 + AT_rich Low_complexity Low_complexity 1 30 0 462 316 47 26 chr10 30279439 30279629 -110037136 - MIR SINE MIR -62 200 7 2197 107 3 3 chr10 30279662 30279951 -110036814 - AluSx SINE Alu -11 301 13 378 0 0 0 chr10 30280026 30280068 -110036697 + (TG)n Simple_repeat Simple_repeat 2 43 0 188 33 0 33 chr10 30280454 30280484 -110036281 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 1599 187 7 10 chr10 30280970 30281082 -110035683 + AluJo SINE Alu 22 133 -179 2400 77 3 0 chr10 30281082 30281381 -110035384 + AluY SINE Alu 1 300 -11 1599 187 7 10 chr10 30281381 30281557 -110035208 + AluJo SINE Alu 133 309 -3 706 209 0 0 chr10 30281640 30281790 -110034975 + FLAM_C SINE Alu 1 150 0 401 264 40 0 chr10 30281960 30282085 -110034680 - L2 LINE L2 -7 3306 3177 1941 175 26 6 chr10 30282147 30282490 -110034275 + MLT1A1 LTR MaLR 16 365 0 809 270 83 0 chr10 30282560 30282812 -110033953 - Charlie4a DNA MER1_type 0 508 236 546 211 89 83 chr10 30282883 30283035 -110033730 - MIR SINE MIR -73 189 34 1506 173 0 4 chr10 30283035 30283266 -110033499 - AluJb SINE Alu -77 235 6 546 211 89 83 chr10 30283266 30283293 -110033472 - MIR SINE MIR -228 34 9 1839 149 0 56 chr10 30283446 30283563 -110033202 + AluJo SINE Alu 1 123 -189 2275 123 0 0 chr10 30283563 30283871 -110032894 - AluSx SINE Alu -4 308 1 1839 149 0 56 chr10 30283871 30284074 -110032691 + AluJo SINE Alu 123 303 -9 225 0 0 0 chr10 30285309 30285334 -110031431 + (A)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr10 30285656 30285677 -110031088 + AT_rich Low_complexity Low_complexity 1 21 0 2400 55 0 10 chr10 30287441 30287730 -110029035 + AluY SINE Alu 18 303 -8 307 255 81 36 chr10 30288202 30288328 -110028437 + L1ME LINE L1 1 131 -5939 452 200 24 0 chr10 30288329 30288414 -110028351 + FAM SINE Alu 1 78 -98 410 237 11 32 chr10 30288446 30288539 -110028226 + FAM SINE Alu 81 171 -4 1674 199 0 19 chr10 30288722 30289038 -110027727 - AluJo SINE Alu -2 310 1 497 261 82 0 chr10 30289119 30289253 -110027512 + L2 LINE L2 3168 3312 -1 1975 149 7 0 chr10 30289647 30289952 -110026813 - AluSx SINE Alu 0 307 1 309 51 0 0 chr10 30290317 30290356 -110026409 + (TG)n Simple_repeat Simple_repeat 2 40 0 187 248 143 0 chr10 30290643 30290748 -110026017 - MIR SINE MIR -1 261 142 1958 159 0 3 chr10 30290751 30291040 -110025725 - AluJo SINE Alu -24 288 1 2259 98 7 10 chr10 30291215 30291522 -110025243 - AluSq SINE Alu -7 306 1 2172 117 0 26 chr10 30291988 30292295 -110024470 + AluSx SINE Alu 1 299 -13 1406 234 54 22 chr10 30292935 30293303 -110023462 - MLT1F LTR MaLR 0 542 163 832 29 0 39 chr10 30293305 30293408 -110023357 - AluY SINE Alu -16 295 197 536 243 181 7 chr10 30293408 30293552 -110023213 - MLT1F LTR MaLR -371 171 3 307 306 52 17 chr10 30293624 30293797 -110022968 + L1M4 LINE L1 2909 3087 -3059 915 192 6 12 chr10 30293806 30293973 -110022792 + FRAM SINE Alu 1 166 0 1845 90 0 90 chr10 30293974 30294262 -110022503 - AluY SINE Alu -49 262 1 244 242 11 33 chr10 30294316 30294407 -110022358 + L1M4 LINE L1 3202 3290 -2856 1060 163 0 11 chr10 30294441 30294619 -110022146 + FRAM SINE Alu 1 176 0 1201 110 0 0 chr10 30294701 30294864 -110021901 + AluSg/x SINE Alu 142 304 -6 432 0 0 0 chr10 30294903 30294951 -110021814 + (CA)n Simple_repeat Simple_repeat 1 48 0 329 222 137 43 chr10 30295016 30295133 -110021632 - L2 LINE L2 0 3313 3186 2170 106 7 13 chr10 30295162 30295464 -110021301 - AluSx SINE Alu -12 300 1 2617 53 0 0 chr10 30295907 30296211 -110020554 + AluY SINE Alu 1 304 -7 1905 153 13 3 chr10 30296324 30296632 -110020133 + AluJb SINE Alu 2 312 0 2503 32 6 41 chr10 30296931 30297245 -110019520 + AluY SINE Alu 1 303 -8 1683 168 68 7 chr10 30297357 30297649 -110019116 - AluJo SINE Alu -2 310 1 349 329 7 0 chr10 30297702 30297839 -110018926 - LTR67 LTR ERVL -2 555 418 228 83 62 0 chr10 30298226 30298274 -110018491 + (TA)n Simple_repeat Simple_repeat 1 51 0 1901 163 0 10 chr10 30298593 30298893 -110017872 + AluSx SINE Alu 1 297 -15 675 306 41 18 chr10 30299209 30299549 -110017216 - L2 LINE L2 -104 3209 2862 2697 98 3 11 chr10 30299611 30299978 -110016787 + THE1B LTR MaLR 1 364 0 1898 146 9 19 chr10 30300199 30300514 -110016251 + AluJo SINE Alu 1 312 0 432 0 0 0 chr10 30301355 30301403 -110015362 + (CA)n Simple_repeat Simple_repeat 1 48 0 329 222 137 43 chr10 30301468 30301585 -110015180 - L2 LINE L2 0 3313 3186 2000 88 22 18 chr10 30301614 30301886 -110014879 - AluSc SINE Alu -10 299 27 209 145 87 0 chr10 30301942 30302011 -110014754 + GA-rich Low_complexity Low_complexity 2 76 0 2130 120 3 13 chr10 30302653 30302961 -110013804 + AluSx SINE Alu 1 305 -7 1258 221 0 41 chr10 30303592 30303886 -110012879 - AluJo SINE Alu 0 312 31 2075 120 0 23 chr10 30304439 30304738 -110012027 + AluSx SINE Alu 1 292 -20 24 0 0 0 chr10 30304738 30304762 -110012003 + AT_rich Low_complexity Low_complexity 1 24 0 446 295 52 80 chr10 30305591 30305842 -110010923 + L1ME LINE L1 3703 3946 -2200 10151 163 24 1 chr10 30306069 30308562 -110008203 - L1PA13 LINE L1 -11 6152 3607 617 253 84 69 chr10 30308623 30308825 -110007940 + MLT1G1 LTR MaLR 150 392 -176 231 223 75 53 chr10 30308850 30308944 -110007821 + MLT1H LTR MaLR 456 595 0 901 221 22 40 chr10 30309064 30309290 -110007475 - MER58A DNA MER1_type -1 223 2 1022 281 113 73 chr10 30309342 30309702 -110007063 - L2 LINE L2 -821 2493 2149 2646 157 19 32 chr10 30309702 30310134 -110006631 + MSTB LTR MaLR 1 426 0 1022 281 113 73 chr10 30310134 30310461 -110006304 - L2 LINE L2 -1165 2149 1778 282 304 94 12 chr10 30310678 30310849 -110005916 + L1ME LINE L1 4006 4190 -1956 919 187 8 92 chr10 30310912 30311163 -110005602 + MER63C DNA MER1_type 255 484 -446 407 159 14 0 chr10 30311164 30311233 -110005532 - MSTB2 LTR MaLR 0 457 388 1668 162 0 18 chr10 30311233 30311505 -110005260 + AluJb SINE Alu 1 267 -45 904 104 35 12 chr10 30311507 30311680 -110005085 + GA-rich Low_complexity Low_complexity 4 180 0 182 171 24 0 chr10 30311705 30311746 -110005019 + A-rich Low_complexity Low_complexity 3 44 0 2158 144 83 19 chr10 30311750 30312124 -110004641 - MSTB2 LTR MaLR -57 400 3 1934 167 8 25 chr10 30312125 30312490 -110004275 + MER63C DNA MER1_type 481 839 -91 612 209 31 31 chr10 30312492 30312655 -110004110 + MER63C DNA MER1_type 767 929 -1 27 0 0 0 chr10 30312855 30312882 -110003883 + AT_rich Low_complexity Low_complexity 1 27 0 622 205 42 18 chr10 30312895 30313061 -110003704 + L1ME LINE L1 4490 4659 -1487 2136 93 0 0 chr10 30313549 30313817 -110002948 - AluSc SINE Alu -41 268 1 434 249 102 27 chr10 30313827 30314015 -110002750 + L1ME LINE L1 5146 5369 -793 997 209 104 14 chr10 30314015 30314312 -110002453 - MER33 DNA MER1_type 0 324 1 434 249 102 27 chr10 30314312 30314443 -110002322 + L1ME LINE L1 5369 5489 -673 1180 210 0 5 chr10 30314507 30314726 -110002039 + AluJb SINE Alu 87 304 -8 200 239 22 0 chr10 30314730 30314776 -110001989 + GA-rich Low_complexity Low_complexity 2 48 0 2327 83 0 32 chr10 30315298 30315610 -110001155 - AluY SINE Alu -9 302 1 1013 268 40 43 chr10 30315987 30316360 -110000405 - MER110 LTR ERV1 -15 476 105 2033 140 0 10 chr10 30316650 30316958 -109999807 + AluSx SINE Alu 5 309 -3 229 270 110 0 chr10 30316986 30317086 -109999679 + MLT1L LTR MaLR 487 597 -18 397 336 55 23 chr10 30317168 30317388 -109999377 - L2 LINE L2 -480 2834 2608 404 283 20 0 chr10 30317442 30317541 -109999224 - L2 LINE L2 0 3313 3213 199 200 0 44 chr10 30317641 30317686 -109999079 - MIR SINE MIR -103 159 117 839 182 0 0 chr10 30317702 30317834 -109998931 + FLAM_A SINE Alu 1 132 -1 1884 146 9 19 chr10 30318036 30318351 -109998414 - AluJo SINE Alu 0 312 1 2839 98 3 11 chr10 30318572 30318939 -109997826 - THE1B LTR MaLR 0 364 1 763 306 41 18 chr10 30319001 30319341 -109997424 + L2 LINE L2 2862 3209 -104 1867 167 0 10 chr10 30319657 30319957 -109996808 - AluSx SINE Alu -15 297 1 228 83 62 0 chr10 30320276 30320324 -109996441 + (TA)n Simple_repeat Simple_repeat 2 52 0 195 214 45 79 chr10 30320333 30320422 -109996343 + L2 LINE L2 2211 2296 -1018 355 329 7 0 chr10 30320711 30320848 -109995917 + LTR67 LTR ERVL 418 555 -2 1717 161 68 7 chr10 30320901 30321193 -109995572 + AluJo SINE Alu 1 310 -2 2462 35 6 41 chr10 30321305 30321619 -109995146 - AluY SINE Alu -8 303 1 1849 159 13 3 chr10 30321916 30322224 -109994541 - AluJb SINE Alu 0 312 2 2603 49 0 0 chr10 30322337 30322641 -109994124 - AluY SINE Alu -7 304 1 2284 109 3 0 chr10 30323084 30323395 -109993370 + AluSx SINE Alu 1 312 0 181 191 0 85 chr10 30323409 30323456 -109993309 + MER5A DNA MER1_type 43 85 -104 1452 181 0 15 chr10 30323861 30324126 -109992639 + AluJo SINE Alu 44 304 -8 567 0 0 0 chr10 30324127 30324190 -109992575 + (GGAAA)n Simple_repeat Simple_repeat 1 63 0 2093 127 0 0 chr10 30324239 30324577 -109992188 - AluSx SINE Alu 0 338 1 191 125 62 0 chr10 30324942 30324974 -109991791 - MIR SINE MIR -113 149 116 1315 195 13 42 chr10 30325761 30325926 -109990839 + L1ME1 LINE L1 5276 5444 -722 1910 101 7 61 chr10 30325926 30326072 -109990693 + AluSg SINE Alu 1 153 -159 2799 3 0 0 chr10 30326072 30326370 -109990395 + AluYa5 SINE Alu 1 298 -13 1910 101 7 61 chr10 30326370 30326551 -109990214 + AluSg SINE Alu 153 312 0 2413 56 3 37 chr10 30326554 30326876 -109989889 + AluY SINE Alu 1 311 0 1315 195 13 42 chr10 30326876 30327013 -109989752 + L1ME1 LINE L1 5446 5574 -592 1174 219 40 92 chr10 30327016 30327495 -109989270 + L1ME1 LINE L1 5685 6301 -33 1565 176 16 38 chr10 30327521 30327840 -109988925 - AluJo SINE Alu 0 312 1 188 260 110 27 chr10 30327999 30328072 -109988693 - L2 LINE L2 0 3272 3194 1450 90 30 5 chr10 30328610 30328810 -109987955 + AluSc SINE Alu 96 300 -9 186 43 0 0 chr10 30328813 30328836 -109987929 + (GGA)n Simple_repeat Simple_repeat 3 25 0 1496 170 28 60 chr10 30328912 30329229 -109987536 + AluJo SINE Alu 1 307 -5 28 0 0 0 chr10 30329507 30329535 -109987230 + AT_rich Low_complexity Low_complexity 1 28 0 2152 122 0 0 chr10 30329541 30329829 -109986936 - AluSx SINE Alu -24 288 1 263 320 7 34 chr10 30330069 30330216 -109986549 + GA-rich Low_complexity Low_complexity 6 148 0 4136 147 6 14 chr10 30330268 30330915 -109985850 - LTR48B LTR ERV1 -2 642 1 565 205 34 0 chr10 30331014 30331131 -109985634 + L1PB4 LINE L1 6033 6153 -3 1964 169 0 0 chr10 30331139 30331441 -109985324 + AluJb SINE Alu 1 302 -10 1538 166 63 0 chr10 30332084 30332368 -109984397 - AluJo SINE Alu -9 303 2 2309 119 0 0 chr10 30333101 30333412 -109983353 - AluSx SINE Alu -1 311 1 2385 77 7 7 chr10 30333570 30333870 -109982895 - AluSc SINE Alu -9 300 1 1125 132 9 71 chr10 30334156 30334368 -109982397 + AluJo SINE Alu 1 199 -113 1454 120 0 0 chr10 30334379 30334571 -109982194 + AluSg/x SINE Alu 112 303 -9 892 188 38 0 chr10 30334571 30334731 -109982034 + AluJo/FRAM SINE Alu 134 299 -13 209 234 16 0 chr10 30334731 30334795 -109981970 + GA-rich Low_complexity Low_complexity 1 65 0 384 245 63 15 chr10 30334796 30334944 -109981821 - L2 LINE L2 -263 3009 2859 683 321 11 5 chr10 30335104 30335294 -109981471 - MER91A DNA MER1_type -2 194 4 1975 190 76 66 chr10 30335519 30335789 -109980976 - MLT1D LTR MaLR 0 505 226 390 21 0 0 chr10 30335789 30335836 -109980929 + (CA)n Simple_repeat Simple_repeat 1 47 0 1975 190 76 66 chr10 30335836 30336065 -109980700 - MLT1D LTR MaLR -279 226 1 3344 97 41 0 chr10 30336193 30336656 -109980109 + L1PA16 LINE L1 5676 6157 -9 22 0 0 0 chr10 30336656 30336678 -109980087 + AT_rich Low_complexity Low_complexity 1 22 0 182 286 170 36 chr10 30336847 30336959 -109979806 + MIR SINE MIR 19 145 -63 1372 201 33 33 chr10 30337011 30337315 -109979450 + AluJo SINE Alu 1 304 -8 555 328 20 10 chr10 30337381 30337576 -109979189 - MIR SINE MIR -55 207 11 2158 133 0 0 chr10 30337593 30337894 -109978871 + AluSx SINE Alu 1 301 -11 257 192 77 0 chr10 30337894 30337972 -109978793 - L1MC4 LINE L1 -1346 6696 6613 253 179 18 36 chr10 30338986 30339042 -109977723 - L2 LINE L2 -75 3238 3184 211 198 70 0 chr10 30339063 30339149 -109977616 + (TA)n Simple_repeat Simple_repeat 2 93 0 1717 114 107 4 chr10 30339272 30339544 -109977221 - AluSx SINE Alu -12 300 1 626 253 15 64 chr10 30340202 30340404 -109976361 - MIR SINE MIR -58 204 13 2002 146 3 3 chr10 30340712 30341007 -109975758 + AluJb SINE Alu 1 295 -17 864 198 122 10 chr10 30341894 30342091 -109974674 - MIR SINE MIR -26 236 18 2191 107 0 0 chr10 30342107 30342427 -109974338 - AluY SINE Alu 0 320 1 341 257 78 49 chr10 30342465 30342710 -109974055 + L1ME4a LINE L1 5869 6120 -1 2177 123 10 0 chr10 30342913 30343214 -109973551 - AluSx SINE Alu -8 304 1 1699 160 35 7 chr10 30344209 30344491 -109972274 - AluJb SINE Alu -22 290 1 1731 99 9 105 chr10 30344504 30344559 -109972206 - L1MB4 LINE L1 -2 6178 6119 1741 143 16 50 chr10 30344559 30344881 -109971884 + AluJo SINE Alu 1 311 -1 1731 99 9 105 chr10 30344881 30345060 -109971705 - L1MB4 LINE L1 -61 6119 5983 1925 161 3 0 chr10 30345060 30345359 -109971406 - AluJb SINE Alu -12 300 1 1731 99 9 105 chr10 30345359 30345455 -109971310 - L1MB4 LINE L1 -197 5983 5879 1007 180 43 36 chr10 30345455 30345677 -109971088 - MLT2B1 LTR ERVL -10 510 283 2143 97 3 3 chr10 30346770 30347058 -109969707 - AluSx SINE Alu -16 296 9 1435 170 51 16 chr10 30347399 30347637 -109969128 + MER33 DNA MER1_type 1 243 -2342 1661 160 7 14 chr10 30347637 30347931 -109968834 - AluJb SINE Alu -20 292 1 1435 170 51 16 chr10 30347931 30348011 -109968754 + MER33 DNA MER1_type 243 319 -5 494 283 41 97 chr10 30348028 30348297 -109968468 - MIR SINE MIR 0 262 9 1143 130 0 0 chr10 30349138 30349442 -109967323 + (TCCA)n Simple_repeat Simple_repeat 1 304 0 208 358 32 0 chr10 30349443 30349538 -109967227 - L2 LINE L2 -49 3264 3167 1815 168 6 16 chr10 30349556 30349872 -109966893 - MER4D LTR ERV1 -11 892 580 479 131 0 91 chr10 30349923 30350054 -109966711 - MER4E LTR ERV1 -589 283 62 * 1604 142 77 4 chr10 30350040 30350314 -109966451 - MER49 LTR ERV1 -629 294 1 460 314 48 72 chr10 30350451 30350479 -109966286 - L2 LINE L2 -345 2969 2942 3974 141 51 2 chr10 30350479 30351082 -109965683 + MER41B LTR ERV1 2 634 -1 460 314 48 72 chr10 30351082 30351387 -109965378 - L2 LINE L2 -372 2942 2644 506 239 131 11 chr10 30352119 30352295 -109964470 + LTR33 LTR ERVL 5 201 -320 1575 154 22 11 chr10 30352299 30352571 -109964194 + AluJo SINE Alu 5 279 -33 318 216 0 0 chr10 30352613 30352687 -109964078 + G-rich Low_complexity Low_complexity 2 75 0 276 188 0 0 chr10 30352705 30352774 -109963991 + A-rich Low_complexity Low_complexity 1 69 0 331 254 127 24 chr10 30352785 30352911 -109963854 + L1MCa LINE L1 1162 1300 -5126 4036 194 44 19 chr10 30353189 30354166 -109962599 + L1PA11 LINE L1 3161 4161 -1985 6327 107 13 1 chr10 30354600 30355718 -109961047 + L1PA11 LINE L1 5043 6174 0 836 142 119 135 chr10 30355707 30356010 -109960755 + L1MB2 LINE L1 5478 5775 -525 * 1900 157 9 15 chr10 30356117 30356449 -109960316 + L1MB2 LINE L1 5835 6164 -7 939 259 91 3 chr10 30356456 30356753 -109960012 - L2 LINE L2 -609 2705 2383 1220 269 25 11 chr10 30356754 30357119 -109959646 + ERVL LTR ERVL 4324 4693 -1071 1379 122 0 69 chr10 30357331 30357467 -109959298 - L1M2 LINE L1 -559 5741 5597 2482 60 0 3 chr10 30357467 30357767 -109958998 - AluY SINE Alu -12 299 1 2330 102 3 0 chr10 30357767 30358072 -109958693 - AluSg SINE Alu -4 306 1 1379 122 0 69 chr10 30358072 30358179 -109958586 - L1M2 LINE L1 -701 5599 5514 2334 97 0 10 chr10 30358180 30358479 -109958286 + AluSx SINE Alu 2 297 -15 738 143 0 0 chr10 30358510 30358622 -109958143 - AluJb SINE Alu -9 303 192 1749 144 0 0 chr10 30359012 30359269 -109957496 + Tigger3(Golem) DNA MER2_type 2769 3025 -4 1053 236 91 15 chr10 30359596 30359994 -109956771 - L1M4 LINE L1 -1432 4714 4287 233 239 0 15 chr10 30359991 30360058 -109956707 - L1MC/D LINE L1 -707 5535 5470 * 328 144 83 23 chr10 30360250 30360296 -109956469 + (TATAG)n Simple_repeat Simple_repeat 1 43 -97 410 76 197 0 chr10 30360296 30360362 -109956403 + MADE1 DNA Mariner 2 80 0 328 144 83 23 chr10 30360362 30360447 -109956318 + (TATAG)n Simple_repeat Simple_repeat 43 140 0 4568 164 32 66 chr10 30360448 30360954 -109955811 - L1MB1 LINE L1 -65 6103 5581 2477 82 0 0 chr10 30360954 30361260 -109955505 - AluY SINE Alu -5 306 1 4568 164 32 66 chr10 30361260 30361440 -109955325 - L1MB1 LINE L1 -587 5581 5396 264 30 0 0 chr10 30361440 30361473 -109955292 + (TG)n Simple_repeat Simple_repeat 2 34 0 4568 164 32 66 chr10 30361473 30362604 -109954161 - L1MB1 LINE L1 -772 5396 4358 1203 292 63 60 chr10 30362730 30363027 -109953738 - L1M3d LINE L1 -5230 661 366 2296 51 27 0 chr10 30363027 30363323 -109953442 - AluY SINE Alu -7 304 1 1203 292 63 60 chr10 30363323 30363676 -109953089 - L1M3d LINE L1 -5525 366 9 189 0 0 0 chr10 30363684 30363705 -109953060 + (TC)n Simple_repeat Simple_repeat 2 22 0 * 333 0 0 0 chr10 30363704 30363741 -109953024 + (TG)n Simple_repeat Simple_repeat 2 38 0 1822 157 34 7 chr10 30363743 30364036 -109952729 - AluSx SINE Alu -11 301 1 1543 169 13 91 chr10 30364039 30364329 -109952436 - L1MC/D LINE L1 -743 5403 5203 2155 145 24 0 chr10 30364329 30364667 -109952098 - MER7A DNA MER2_type 0 346 3 1543 169 13 91 chr10 30364667 30364970 -109951795 - L1MC/D LINE L1 -943 5203 4878 280 267 0 0 chr10 30365116 30365202 -109951563 - MIR SINE MIR -2 260 175 2272 89 20 0 chr10 30365347 30365640 -109951125 + AluSp SINE Alu 1 299 -14 580 216 86 86 chr10 30365662 30366000 -109950765 - L1MC5 LINE L1 -60 7901 7564 554 154 0 0 chr10 30366096 30366187 -109950578 + L1MB3 LINE L1 5764 5854 -329 2510 168 13 49 chr10 30366344 30366361 -109950404 + L1MA6 LINE L1 5763 5779 -521 2053 143 3 10 chr10 30366361 30366668 -109950097 + AluSx SINE Alu 1 305 -7 2510 168 13 49 chr10 30366668 30366680 -109950085 + L1MA6 LINE L1 5779 5790 -510 270 81 0 0 chr10 30366680 30366717 -109950048 + (CA)n Simple_repeat Simple_repeat 2 38 0 2510 168 13 49 chr10 30366717 30366877 -109949888 + L1MA6 LINE L1 5790 5954 -346 2158 74 0 45 chr10 30366877 30367187 -109949578 + AluY SINE Alu 1 296 -15 2510 168 13 49 chr10 30367187 30367334 -109949431 + L1MA6 LINE L1 5954 6105 -195 2399 124 14 8 chr10 30367334 30367696 -109949069 - THE1B LTR MaLR 0 364 1 2510 168 13 49 chr10 30367696 30367905 -109948860 + L1MA6 LINE L1 6105 6291 -9 865 118 22 7 chr10 30368612 30368747 -109948018 + FLAM_C SINE Alu 7 143 0 29 28 0 0 chr10 30368864 30368900 -109947865 + AT_rich Low_complexity Low_complexity 1 36 0 1464 167 0 20 chr10 30369986 30370237 -109946528 - AluJb SINE Alu -2 310 65 1375 230 92 72 chr10 30370756 30371145 -109945620 + L1M3d LINE L1 684 1064 -4827 2032 147 0 10 chr10 30371145 30371444 -109945321 + AluJo SINE Alu 1 296 -16 1375 230 92 72 chr10 30371444 30371552 -109945213 + L1M3d LINE L1 1064 1168 -4723 1906 144 18 4 chr10 30371552 30371878 -109944887 + AluSx SINE Alu 1 330 0 1375 230 92 72 chr10 30371878 30371978 -109944787 + L1M3d LINE L1 1168 1295 -4596 1839 207 70 27 chr10 30371982 30372422 -109944343 + LTR2B LTR ERV1 32 490 0 3449 262 44 37 chr10 30372423 30373210 -109943555 + L1 LINE L1 2542 3322 -4243 2113 129 7 0 chr10 30373210 30373529 -109943236 - AluSx SINE Alu 0 321 1 3449 262 44 37 chr10 30373529 30373850 -109942915 + L1 LINE L1 3322 3639 -3926 2262 109 0 3 chr10 30373850 30374153 -109942612 - AluSx SINE Alu -10 302 1 3449 262 44 37 chr10 30374153 30375077 -109941688 + L1 LINE L1 3639 4593 -2972 913 159 0 6 chr10 30375081 30375251 -109941514 + L1 LINE L1 5634 5802 -1763 2233 89 18 0 chr10 30375252 30375532 -109941233 + AluSg SINE Alu 1 285 -25 609 144 0 0 chr10 30375845 30375942 -109940823 - FRAM SINE Alu -11 165 69 738 129 11 140 chr10 30375944 30376122 -109940643 - MER20 DNA MER1_type -64 155 1 1747 199 3 3 chr10 30376212 30376514 -109940251 - AluJb SINE Alu -8 304 3 2369 98 0 0 chr10 30376597 30376904 -109939861 - AluY SINE Alu -4 307 1 1073 154 36 64 chr10 30376906 30377126 -109939639 - AluJo SINE Alu -17 295 82 1477 157 68 6 chr10 30377126 30377439 -109939326 - L1PA16 LINE L1 0 6154 5801 2094 140 0 7 chr10 30377480 30377780 -109938985 + AluSx SINE Alu 1 298 -14 2911 160 39 30 chr10 30378289 30378832 -109937933 - MLT2B3 LTR ERVL -6 548 1 1693 129 0 24 chr10 30378832 30379087 -109937678 + AluSx SINE Alu 48 296 -16 863 132 0 0 chr10 30379089 30379203 -109937562 + AluSq/x SINE Alu 1 114 -199 288 158 0 0 chr10 30379204 30379261 -109937504 + A-rich Low_complexity Low_complexity 1 57 0 189 0 0 0 chr10 30379334 30379355 -109937410 + (T)n Simple_repeat Simple_repeat 1 21 0 2488 21 45 3 chr10 30379779 30380067 -109936698 - AluY SINE Alu -11 300 1 2364 86 0 7 chr10 30380719 30381021 -109935744 + AluY SINE Alu 1 300 -11 1546 97 21 8 chr10 30381028 30381265 -109935500 + LTR7 LTR ERV1 211 450 0 451 300 56 50 chr10 30381452 30381860 -109934905 - L1ME4a LINE L1 -153 5968 5562 2361 85 3 0 chr10 30381869 30382163 -109934602 - AluSp SINE Alu -18 295 1 2230 91 0 17 chr10 30382215 30382511 -109934254 - AluSx SINE Alu -9 303 13 484 254 7 36 chr10 30383269 30383407 -109933358 - MER94 DNA DNA 0 134 1 502 191 197 0 chr10 30384238 30384385 -109932380 - MIR SINE MIR -1 261 86 1979 107 70 4 chr10 30384629 30384901 -109931864 - AluSg SINE Alu -20 290 1 405 200 0 0 chr10 30384930 30385000 -109931765 + AluJ/FLAM SINE Alu 3 72 -230 1654 286 17 11 chr10 30385019 30385553 -109931212 - LTR48B LTR ERV1 -2 642 106 188 282 155 0 chr10 30385916 30385987 -109930778 - MIR SINE MIR -150 112 31 887 121 0 0 chr10 30386106 30386230 -109930535 + FRAM SINE Alu 47 170 -6 225 368 88 7 chr10 30386408 30386544 -109930221 + L2 LINE L2 3115 3261 -11 870 249 61 9 chr10 30386694 30386907 -109929858 + MER58A DNA MER1_type 1 224 0 388 304 30 15 chr10 30386921 30387056 -109929709 - L2 LINE L2 0 3272 3136 1296 110 75 35 chr10 30387104 30387331 -109929434 + MER46A DNA MER2_type 1 236 0 1619 186 3 10 chr10 30387390 30387680 -109929085 + AluJb SINE Alu 1 288 -24 207 0 0 0 chr10 30387683 30387706 -109929059 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr10 30387712 30387734 -109929031 + AT_rich Low_complexity Low_complexity 1 22 0 235 365 109 21 chr10 30387857 30388049 -109928716 - L2 LINE L2 -337 2977 2769 2198 117 0 10 chr10 30388086 30388386 -109928379 + AluSx SINE Alu 1 297 -15 1299 102 0 0 chr10 30388407 30388573 -109928192 + AluSg/x SINE Alu 135 300 -12 406 333 61 21 chr10 30388586 30388865 -109927900 - L2 LINE L2 -798 2516 2227 21 36 0 0 chr10 30389553 30389581 -109927184 + AT_rich Low_complexity Low_complexity 1 28 0 2573 59 10 0 chr10 30389581 30389886 -109926879 + AluY SINE Alu 1 308 -3 868 264 24 0 chr10 30389917 30390129 -109926636 - AluJo SINE Alu -92 220 4 2315 106 3 3 chr10 30390762 30391074 -109925691 + AluSx SINE Alu 1 312 0 434 187 44 0 chr10 30391587 30391678 -109925087 - L1ME3A LINE L1 -12 6158 6064 2264 103 0 7 chr10 30391986 30392286 -109924479 - AluSc SINE Alu -11 298 1 723 181 8 0 chr10 30393447 30393574 -109923191 - FLAM_A SINE Alu -5 128 1 1760 138 4 14 chr10 30394190 30394466 -109922299 + AluJo SINE Alu 39 311 -1 1187 120 0 0 chr10 30395042 30395209 -109921556 - AluY SINE Alu -11 300 134 2398 78 0 0 chr10 30395678 30395974 -109920791 - AluY SINE Alu -15 296 1 401 167 0 26 chr10 30396171 30396249 -109920516 + LTR33 LTR ERVL 446 521 0 2204 100 3 0 chr10 30396625 30396952 -109919813 + AluSp SINE Alu 2 329 0 1064 261 4 11 chr10 30396952 30397201 -109919564 - MIR SINE MIR -8 254 5 2105 122 0 0 chr10 30397403 30397691 -109919074 + AluSx SINE Alu 23 310 -2 243 253 47 93 chr10 30397866 30397971 -109918794 - MER5A DNA MER1_type -1 188 91 1682 166 155 59 chr10 30397971 30398086 -109918679 + MLT1D LTR MaLR 3 106 -399 2076 113 74 0 chr10 30398086 30398370 -109918395 + AluSq SINE Alu 1 305 -8 1682 166 155 59 chr10 30398370 30398711 -109918054 + MLT1D LTR MaLR 106 503 -2 243 253 47 93 chr10 30398711 30398755 -109918010 - MER5A DNA MER1_type -98 91 46 3464 155 4 6 chr10 30398755 30399279 -109917486 + MER1A DNA MER1_type 1 523 -4 192 217 101 43 chr10 30399593 30399611 -109917154 + MIR SINE MIR 79 95 -167 1717 225 14 100 chr10 30399611 30399994 -109916771 - LTR26B LTR ERV1 -3 528 113 1691 172 0 27 chr10 30399994 30400291 -109916474 + AluJo SINE Alu 1 289 -23 189 0 0 0 chr10 30400294 30400315 -109916450 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 1717 225 14 100 chr10 30400315 30400505 -109916260 - LTR26B LTR ERV1 -420 111 1 192 217 101 43 chr10 30400505 30400555 -109916210 + MIR SINE MIR 95 151 -111 309 285 85 8 chr10 30400608 30400738 -109916027 + L1M4 LINE L1 3850 3989 -2157 2074 136 0 10 chr10 30400893 30401188 -109915577 - AluSx SINE Alu -20 292 1 25 31 0 0 chr10 30401901 30401933 -109914832 + AT_rich Low_complexity Low_complexity 1 32 0 842 139 0 16 chr10 30402142 30402271 -109914494 + FLAM_C SINE Alu 1 127 -16 2112 131 20 0 chr10 30402388 30402686 -109914079 - AluSx SINE Alu -6 306 3 233 216 0 27 chr10 30402920 30402994 -109913771 + CT-rich Low_complexity Low_complexity 2 73 0 2134 125 0 3 chr10 30403334 30403631 -109913134 - AluSx SINE Alu -16 296 1 2233 104 0 0 chr10 30404206 30404493 -109912272 + AluY SINE Alu 1 287 -24 5600 132 15 26 chr10 30404495 30405342 -109911423 - L1PA16 LINE L1 -4 6162 5325 1610 195 21 7 chr10 30405342 30405629 -109911136 - AluJo SINE Alu -21 291 1 5600 132 15 26 chr10 30405629 30405754 -109911011 - L1PA16 LINE L1 -841 5325 5200 2871 102 9 47 chr10 30405803 30405851 -109910914 + MER57B LTR ERV1 1 49 -385 2143 89 34 3 chr10 30405851 30406143 -109910622 - AluSq SINE Alu -12 301 1 2871 102 9 47 chr10 30406143 30406545 -109910220 + MER57B LTR ERV1 49 434 0 237 307 87 31 chr10 30407838 30407907 -109908858 - L2 LINE L2 -5 3308 3244 2504 75 0 3 chr10 30407907 30408212 -109908553 + AluSp SINE Alu 1 304 -9 237 307 87 31 chr10 30408212 30408269 -109908496 - L2 LINE L2 -69 3244 3175 2154 159 75 31 chr10 30408364 30408842 -109907923 - MLT1D LTR MaLR 0 505 7 204 368 78 19 chr10 30409149 30409407 -109907358 - L2 LINE L2 -710 2604 2332 895 218 6 6 chr10 30409421 30409586 -109907179 + MER45A DNA AcHobo 1 165 -13 2581 82 62 3 chr10 30410115 30410469 -109906296 - THE1C LTR MaLR 0 375 1 482 252 0 0 chr10 30410623 30410734 -109906031 + FRAM SINE Alu 1 111 -65 246 211 18 0 chr10 30410822 30410879 -109905886 + AluJ/monomer SINE Alu 244 301 -1 2205 117 0 0 chr10 30410956 30411254 -109905511 + AluSx SINE Alu 1 298 -14 24 0 0 0 chr10 30411254 30411278 -109905487 + AT_rich Low_complexity Low_complexity 1 24 0 1976 144 23 0 chr10 30411712 30412017 -109904748 + AluSx SINE Alu 1 312 0 1731 167 17 20 chr10 30412035 30412334 -109904431 + AluJo SINE Alu 3 300 -12 918 98 17 23 chr10 30412360 30412534 -109904231 + (GAAA)n Simple_repeat Simple_repeat 4 176 0 655 264 73 41 chr10 30412695 30413080 -109903685 + MLT1J2 LTR MaLR 22 409 0 1163 220 0 0 chr10 30413168 30413395 -109903370 - AluJo SINE Alu -7 305 79 2629 45 0 6 chr10 30413695 30414006 -109902759 - AluY SINE Alu -2 309 1 1909 130 46 0 chr10 30414006 30414290 -109902475 - AluSx SINE Alu -14 298 2 643 278 144 17 chr10 30414305 30414722 -109902043 - L1MC/D LINE L1 -2081 5727 5258 1936 139 39 32 chr10 30414889 30415199 -109901566 - AluSx SINE Alu 0 312 1 821 103 0 0 chr10 30415204 30415311 -109901454 - AluSq/x SINE Alu -205 107 1 674 271 33 19 chr10 30415456 30415670 -109901095 - U3 snRNA snRNA 0 217 1 818 162 6 0 chr10 30415749 30415928 -109900837 + CT-rich Low_complexity Low_complexity 1 180 0 695 170 9 6 chr10 30415948 30416309 -109900456 + CT-rich Low_complexity Low_complexity 1 362 0 255 125 0 0 chr10 30416876 30416916 -109899849 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 2044 134 0 26 chr10 30417019 30417332 -109899433 + AluSx SINE Alu 6 310 -2 1695 189 10 3 chr10 30417505 30417807 -109898958 - AluJo SINE Alu -8 304 1 205 340 53 0 chr10 30418082 30418176 -109898589 + L2 LINE L2 3196 3294 -19 2005 135 0 4 chr10 30418713 30418994 -109897771 + AluSx SINE Alu 5 284 -28 976 204 0 57 chr10 30419013 30419243 -109897522 + MER20 DNA MER1_type 3 219 0 755 187 0 0 chr10 30419731 30419854 -109896911 + FLAM_A SINE Alu 1 123 -10 979 238 63 3 chr10 30419859 30420162 -109896603 - L1MC/D LINE L1 -970 5176 4856 2297 92 6 25 chr10 30420172 30420488 -109896277 + AluSp SINE Alu 1 310 -3 449 180 31 11 chr10 30420534 30420682 -109896083 + L1MC/D LINE L1 5183 5333 -838 724 199 8 0 chr10 30420682 30420813 -109895952 + FLAM_A SINE Alu 1 132 -1 1923 104 18 0 chr10 30420852 30421131 -109895634 + L1MC/D LINE L1 5315 5598 -735 280 114 0 0 chr10 30421131 30421175 -109895590 + Alu SINE Alu 255 298 -3 2296 120 0 0 chr10 30421285 30421594 -109895171 + AluSg SINE Alu 1 309 -1 2180 114 7 0 chr10 30421931 30422237 -109894528 - AluSx SINE Alu -2 310 3 2964 155 27 12 chr10 30422420 30422931 -109893834 + Tigger1 DNA MER2_type 1 519 -1899 4900 151 42 23 chr10 30422932 30423521 -109893244 - L1PB4 LINE L1 -76 6080 5503 1432 171 77 21 chr10 30423521 30423807 -109892958 - AluJo SINE Alu -10 302 1 4900 151 42 23 chr10 30423807 30423818 -109892947 - L1PB4 LINE L1 -653 5503 5494 2334 73 0 36 chr10 30423818 30424120 -109892645 - AluY SINE Alu -18 293 3 4900 151 42 23 chr10 30424120 30424578 -109892187 - L1PB4 LINE L1 -662 5494 4988 1561 125 27 0 chr10 30424578 30424802 -109891963 + MER30 DNA MER1_type 1 230 0 4900 151 42 23 chr10 30424802 30425083 -109891682 - L1PB4 LINE L1 -1168 4988 4714 3135 112 24 4 chr10 30425083 30425538 -109891227 + Tigger1 DNA MER2_type 1950 2413 -5 1211 255 105 20 chr10 30425599 30425991 -109890774 + MLT1J1 LTR MaLR 17 441 -5 2101 111 31 3 chr10 30426013 30426302 -109890463 - AluSx SINE Alu -15 297 1 492 318 130 12 chr10 30426308 30426638 -109890127 - L1MC4a LINE L1 -1930 5878 5510 504 218 79 71 chr10 30426942 30427371 -109889394 - MLT1H LTR MaLR 0 530 60 535 271 20 39 chr10 30427391 30427594 -109889171 - HERV16 LTR ERVL -1340 3656 3458 887 180 0 0 chr10 30427599 30427749 -109889016 - FRAM SINE Alu -3 173 24 1949 132 48 0 chr10 30428090 30428379 -109888386 + AluSx SINE Alu 1 303 -9 565 311 85 9 chr10 30428508 30428982 -109887783 - HERV16 LTR ERVL -2440 3214 2675 2286 122 3 0 chr10 30428988 30429292 -109887473 - AluSx SINE Alu -7 305 1 280 250 87 17 chr10 30429521 30429693 -109887072 - L1M1 LINE L1 -835 5468 5285 21 95 0 0 chr10 30429711 30429774 -109886991 + AT_rich Low_complexity Low_complexity 1 63 0 22 70 0 0 chr10 30429784 30429827 -109886938 + AT_rich Low_complexity Low_complexity 1 43 0 37 110 0 0 chr10 30429893 30430056 -109886709 + AT_rich Low_complexity Low_complexity 1 163 0 589 333 79 33 chr10 30430141 30430229 -109886536 + L2 LINE L2 1834 1916 -1398 2197 128 0 0 chr10 30430229 30430526 -109886239 + AluSx SINE Alu 1 297 -15 589 333 79 33 chr10 30430526 30430956 -109885809 + L2 LINE L2 1916 2376 -938 485 266 39 7 chr10 30430956 30431110 -109885655 + L2 LINE L2 1768 1926 -1388 1241 190 33 94 chr10 30431123 30431454 -109885311 - AluJo SINE Alu -1 311 1 263 318 48 21 chr10 30431459 30431648 -109885117 + L2 LINE L2 2842 3035 -237 1634 178 46 4 chr10 30432705 30432986 -109883779 + AluJo SINE Alu 1 293 -19 1347 307 30 22 chr10 30433550 30434229 -109882536 + ERVL LTR ERVL 2154 2852 -2633 1822 166 7 7 chr10 30434247 30434536 -109882229 + AluJo SINE Alu 1 289 -23 409 270 20 59 chr10 30434555 30434707 -109882058 + ERVL LTR ERVL 2949 3094 -2560 1262 288 30 30 chr10 30434737 30435203 -109881562 + ERVL LTR ERVL 3280 3745 -2019 2631 186 20 5 chr10 30435273 30435720 -109881045 - MER82 DNA MER2_type -1 652 199 332 102 0 0 chr10 30435807 30435856 -109880909 - MLT2B3 LTR ERVL -8 512 464 434 108 17 42 chr10 30435856 30435976 -109880789 + (TA)n Simple_repeat Simple_repeat 2 118 0 936 227 86 39 chr10 30436058 30436314 -109880451 - MLT2B3 LTR ERVL -286 268 1 608 266 0 0 chr10 30436583 30436722 -109880043 - MER82 DNA MER2_type -514 139 1 3028 92 34 75 chr10 30437046 30437778 -109878987 - MER51A LTR ERV1 0 634 1 1062 307 60 41 chr10 30437780 30438491 -109878274 + L2 LINE L2 1846 2570 -744 2111 102 20 36 chr10 30438927 30439231 -109877534 + AluSx SINE Alu 1 299 -13 1813 136 7 52 chr10 30440047 30440173 -109876592 + AluJo SINE Alu 5 135 -177 186 43 0 0 chr10 30440173 30440196 -109876569 + (TA)n Simple_repeat Simple_repeat 1 23 0 1813 136 7 52 chr10 30440196 30440377 -109876388 + AluJo SINE Alu 135 298 -14 312 27 0 0 chr10 30440386 30440423 -109876342 + (CA)n Simple_repeat Simple_repeat 2 38 0 365 358 81 11 chr10 30440797 30441068 -109875697 + L1MC/D LINE L1 5454 5743 -2065 235 254 15 15 chr10 30441098 30441165 -109875600 - MIR SINE MIR -24 238 172 338 261 0 9 chr10 30441177 30441198 -109875567 - L1MA4A LINE L1 -2 6301 5969 2217 106 0 29 chr10 30441198 30441510 -109875255 - AluSx SINE Alu -9 303 1 4956 127 20 1 chr10 30441510 30442267 -109874498 - L1PB4 LINE L1 -6 6150 5380 294 280 30 30 chr10 30442292 30442392 -109874373 - MIR SINE MIR -120 142 43 2368 84 0 47 chr10 30442400 30442722 -109874043 - AluSq SINE Alu -6 307 1 2209 128 0 0 chr10 30442888 30443186 -109873579 + AluSx SINE Alu 1 298 -14 1851 143 49 0 chr10 30443264 30443550 -109873215 + AluSq SINE Alu 1 300 -13 258 33 0 0 chr10 30443645 30443675 -109873090 - LTR6A LTR ERV1 -462 102 73 1116 137 0 19 chr10 30444748 30444909 -109871856 - FRAM SINE Alu -24 152 1 2106 134 0 0 chr10 30444928 30445219 -109871546 + AluSx SINE Alu 1 291 -21 475 350 30 18 chr10 30445287 30445537 -109871228 - MIR SINE MIR -9 253 3 718 179 32 0 chr10 30445995 30446118 -109870647 + AluJo/FLAM SINE Alu 1 127 -175 1433 175 52 4 chr10 30446120 30446389 -109870376 + AluJo SINE Alu 1 282 -30 1683 193 17 0 chr10 30446614 30446909 -109869856 - AluJb SINE Alu -12 300 1 210 105 0 0 chr10 30446920 30446958 -109869807 + (TTTC)n Simple_repeat Simple_repeat 3 40 0 1835 142 0 62 chr10 30446960 30447269 -109869496 - AluJb SINE Alu -22 290 1 2397 48 45 0 chr10 30447342 30447631 -109869134 + AluY SINE Alu 1 302 -9 2379 98 0 13 chr10 30448251 30448567 -109868198 - AluSx SINE Alu 0 312 1 258 188 232 0 chr10 30448748 30448817 -109867948 - MLT1J2 LTR MaLR 0 450 366 577 245 177 10 chr10 30448888 30449080 -109867685 - MLT1J2 LTR MaLR -207 243 20 2139 179 6 0 chr10 30449128 30449492 -109867273 + MER47A DNA MER2_type 1 366 0 243 240 23 154 chr10 30450114 30450335 -109866430 - 7SK RNA RNA -1 192 1 1753 159 13 40 chr10 30450437 30450738 -109866027 + AluJo SINE Alu 7 299 -13 1639 168 50 18 chr10 30451110 30451269 -109865496 - AluJo SINE Alu -23 289 116 270 0 0 0 chr10 30451269 30451299 -109865466 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1639 168 50 18 chr10 30451299 30451419 -109865346 - AluJo SINE Alu -196 116 1 612 250 28 6 chr10 30451859 30452035 -109864730 + MIR SINE MIR 13 192 -70 1938 100 32 11 chr10 30452040 30452319 -109864446 + AluSq SINE Alu 5 289 -24 188 316 0 26 chr10 30452341 30452417 -109864348 + MIR SINE MIR 185 258 -4 2402 85 0 0 chr10 30452497 30452791 -109863974 + AluSp SINE Alu 1 294 -19 185 342 177 13 chr10 30452942 30453100 -109863665 + L2 LINE L2 2573 2756 -558 226 189 176 14 chr10 30453315 30453389 -109863376 + MER5A DNA MER1_type 24 109 -80 1603 160 0 107 chr10 30453431 30453600 -109863165 - AluSx SINE Alu 0 302 185 2032 123 0 33 chr10 30453600 30453900 -109862865 - AluSx SINE Alu -22 290 1 1603 160 0 107 chr10 30453900 30454068 -109862697 - AluSx SINE Alu -117 185 1 1905 172 7 0 chr10 30454423 30454753 -109862012 + AluSx SINE Alu 1 312 0 25 0 0 0 chr10 30454910 30454935 -109861830 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr10 30454996 30455019 -109861746 + AT_rich Low_complexity Low_complexity 1 23 0 2041 120 10 36 chr10 30455042 30455350 -109861415 - AluSx SINE Alu -12 300 1 227 284 25 0 chr10 30455618 30455699 -109861066 + L1ME LINE L1 5533 5615 -506 1700 173 4 0 chr10 30455725 30455997 -109860768 + AluJo SINE Alu 28 300 -12 2172 106 0 0 chr10 30456205 30456489 -109860276 + AluSx SINE Alu 3 286 -26 337 294 40 8 chr10 30456753 30456879 -109859886 - MIR SINE MIR -72 190 61 2146 118 0 7 chr10 30458031 30458328 -109858437 + AluSx SINE Alu 1 295 -17 2570 70 0 0 chr10 30458631 30458931 -109857834 - AluSx SINE Alu -12 300 1 190 220 59 119 chr10 30459460 30459511 -109857254 - MIR SINE MIR -32 230 178 1646 167 36 14 chr10 30459511 30459787 -109856978 + AluJb SINE Alu 1 282 -30 180 0 0 0 chr10 30459789 30459809 -109856956 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 190 220 59 119 chr10 30459809 30459872 -109856893 - MIR SINE MIR -85 177 120 1403 87 12 127 chr10 30459872 30460124 -109856641 + MER30 DNA MER1_type 8 230 0 21 36 0 0 chr10 30460647 30460675 -109856090 + AT_rich Low_complexity Low_complexity 1 28 0 1951 109 87 0 chr10 30462047 30462323 -109854442 + AluSx SINE Alu 1 300 -12 1770 173 56 0 chr10 30462824 30463148 -109853617 + MER2 DNA MER2_type 1 342 -2 2182 128 0 28 chr10 30463669 30463989 -109852776 - AluSx SINE Alu -1 311 1 731 302 20 8 chr10 30464225 30464473 -109852292 - MIR SINE MIR 0 262 12 385 263 0 21 chr10 30465872 30465967 -109850798 + MIR SINE MIR 47 139 -123 1229 105 0 0 chr10 30466120 30466282 -109850483 - AluSg/x SINE Alu -17 293 132 1149 100 0 0 chr10 30466282 30466432 -109850333 - Ricksha DNA DNA -1203 2043 1894 1656 142 0 0 chr10 30466432 30466672 -109850093 - AluSx SINE Alu -13 299 60 705 167 167 37 chr10 30466709 30466925 -109849840 - LTR65 LTR ERV1 -244 425 182 1270 139 0 0 chr10 30467056 30467236 -109849529 - FRAM SINE Alu -1 175 1 401 89 59 15 chr10 30469086 30469221 -109847544 + (TCTA)n Simple_repeat Simple_repeat 1 141 0 1593 196 11 0 chr10 30469221 30469496 -109847269 - AluJo SINE Alu -25 287 10 231 310 140 6 chr10 30470553 30470724 -109846041 + L2 LINE L2 2771 2964 -350 194 310 0 0 chr10 30470938 30470996 -109845769 + L2 LINE L2 3183 3240 -32 14588 124 42 6 chr10 30472987 30474916 -109841849 + Tigger1 DNA MER2_type 70 2093 -325 2197 114 3 3 chr10 30474916 30475214 -109841551 - AluSx SINE Alu -14 298 1 14588 124 42 6 chr10 30475214 30475551 -109841214 + Tigger1 DNA MER2_type 2093 2417 -1 618 261 11 27 chr10 30477477 30477661 -109839104 - MER5A DNA MER1_type 0 189 9 530 230 182 10 chr10 30477671 30477880 -109838885 + MIR SINE MIR 8 252 -10 1899 80 52 52 chr10 30478316 30478605 -109838160 - AluY SINE Alu -22 289 1 308 301 123 21 chr10 30478689 30478925 -109837840 + L2 LINE L2 3049 3308 -5 419 263 53 29 chr10 30479956 30480127 -109836638 + MER5B DNA MER1_type 3 177 -1 3815 124 116 9 chr10 30480316 30481000 -109835765 - Tigger3(Golem) DNA MER2_type -1 3028 2272 1951 117 3 27 chr10 30481007 30481307 -109835458 - AluSx SINE Alu -19 293 1 2161 126 0 3 chr10 30481858 30482159 -109834606 + AluSq SINE Alu 1 300 -13 270 247 86 74 chr10 30482174 30482336 -109834429 + L1MC5 LINE L1 7768 7931 -30 1893 176 0 0 chr10 30482512 30482813 -109833952 + AluSx SINE Alu 1 301 -11 273 278 189 39 chr10 30482844 30483024 -109833741 + L2 LINE L2 2592 2798 -516 2327 98 0 3 chr10 30483316 30483613 -109833152 - AluSx SINE Alu -16 296 1 246 211 18 0 chr10 30483690 30483747 -109833018 - AluJ/monomer SINE Alu -1 301 244 482 252 0 0 chr10 30483835 30483946 -109832819 - FRAM SINE Alu -65 111 1 2581 82 62 3 chr10 30484100 30484454 -109832311 + THE1C LTR MaLR 1 375 0 895 218 6 6 chr10 30484983 30485148 -109831617 - MER45A DNA AcHobo -13 165 1 204 368 78 19 chr10 30485162 30485420 -109831345 + L2 LINE L2 2332 2604 -710 2107 156 72 33 chr10 30485727 30486182 -109830583 + MLT1D LTR MaLR 7 479 -26 2166 122 0 0 chr10 30486651 30486939 -109829826 + AluSx SINE Alu 1 288 -24 28 0 0 0 chr10 30486945 30486973 -109829792 + AT_rich Low_complexity Low_complexity 1 28 0 1503 170 28 60 chr10 30487251 30487568 -109829197 - AluJo SINE Alu -5 307 1 213 39 0 0 chr10 30487644 30487670 -109829095 + (TCC)n Simple_repeat Simple_repeat 3 28 0 2307 90 7 13 chr10 30487673 30487838 -109828927 - AluSc SINE Alu -11 298 134 2892 16 0 0 chr10 30487838 30488151 -109828614 - AluYb8 SINE Alu -5 313 1 2307 90 7 13 chr10 30488151 30488285 -109828480 - AluSc SINE Alu -175 134 1 2315 64 7 7 chr10 30488295 30488593 -109828172 - AluYa5 SINE Alu -13 298 1 900 75 14 96 chr10 30488593 30488739 -109828026 - AluSg SINE Alu -176 134 1 789 191 0 6 chr10 30488742 30488904 -109827861 - L1ME LINE L1 -730 5436 5276 2115 123 0 0 chr10 30490088 30490431 -109826334 + AluSx SINE Alu 1 343 0 675 94 0 0 chr10 30490480 30490576 -109826189 + (TTTCC)n Simple_repeat Simple_repeat 3 98 0 1389 173 0 16 chr10 30490576 30490819 -109825946 - AluJo SINE Alu -30 282 44 2302 109 3 0 chr10 30491285 30491596 -109825169 - AluSx SINE Alu 0 312 1 2617 53 0 0 chr10 30492039 30492343 -109824422 + AluY SINE Alu 1 304 -7 1883 154 13 3 chr10 30492456 30492761 -109824004 + AluJb SINE Alu 2 309 -3 2503 32 6 41 chr10 30493063 30493377 -109823388 + AluY SINE Alu 1 303 -8 1675 168 69 7 chr10 30493489 30493780 -109822985 - AluJo SINE Alu -3 309 1 349 329 7 0 chr10 30493833 30493970 -109822795 - LTR67 LTR ERVL -2 555 418 195 104 62 0 chr10 30494357 30494405 -109822360 + (TA)n Simple_repeat Simple_repeat 2 52 0 1901 163 0 10 chr10 30494724 30495024 -109821741 + AluSx SINE Alu 1 297 -15 656 300 44 21 chr10 30495340 30495680 -109821085 - L2 LINE L2 -104 3209 2862 2487 114 5 14 chr10 30495742 30496109 -109820656 + THE1B LTR MaLR 1 364 0 1962 142 3 19 chr10 30496330 30496647 -109820118 + AluJo SINE Alu 1 312 0 791 182 0 0 chr10 30496856 30496988 -109819777 - FLAM_A SINE Alu -1 132 1 192 200 0 44 chr10 30497004 30497049 -109819716 + MIR SINE MIR 117 159 -103 375 283 20 0 chr10 30497149 30497248 -109819517 + L2 LINE L2 3213 3313 0 335 336 55 23 chr10 30497302 30497522 -109819243 + L2 LINE L2 2608 2834 -480 2042 140 0 10 chr10 30497731 30498039 -109818726 - AluSx SINE Alu -3 309 5 990 260 48 51 chr10 30498331 30498704 -109818061 + MER110 LTR ERV1 105 476 -15 2444 78 0 31 chr10 30499081 30499402 -109817363 + AluY SINE Alu 1 311 0 541 133 0 0 chr10 30549420 30549495 -109767270 - AluS SINE Alu -237 76 2 1349 191 53 38 chr10 30550528 30550556 -109766209 - L1M4 LINE L1 -3149 2997 2971 1610 182 0 45 chr10 30550556 30550712 -109766053 - AluJo SINE Alu -13 299 162 2293 65 0 68 chr10 30550712 30551035 -109765730 - AluY SINE Alu -10 301 1 1610 182 0 45 chr10 30551035 30551191 -109765574 - AluJo SINE Alu -150 162 1 1349 191 53 38 chr10 30551191 30551273 -109765492 - L1M4 LINE L1 -3175 2971 2892 218 56 28 0 chr10 30551273 30551309 -109765456 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2254 102 10 0 chr10 30551311 30551606 -109765159 - AluSp SINE Alu -15 298 1 1349 191 53 38 chr10 30551606 30551832 -109764933 - L1M4 LINE L1 -3254 2892 2652 566 156 128 18 chr10 30551872 30551981 -109764784 - FLAM_C SINE Alu -16 127 7 382 236 146 14 chr10 30551996 30552140 -109764625 - L1M4 LINE L1 -3536 2610 2448 6339 116 11 23 chr10 30552209 30553209 -109763556 - L1MA5A LINE L1 0 6297 5310 2178 110 7 0 chr10 30553209 30553501 -109763264 - AluSx SINE Alu -18 294 1 1687 116 56 8 chr10 30554049 30554328 -109762437 + AluSx SINE Alu 21 311 0 816 164 0 8 chr10 30554365 30554493 -109762272 - FLAM_C SINE Alu -16 127 1 605 214 24 0 chr10 30554625 30554751 -109762014 + MER5A DNA MER1_type 61 189 0 2125 181 65 117 chr10 30555196 30555278 -109761487 - LTR8A LTR ERV1 -3 724 639 2054 124 0 0 chr10 30555278 30555551 -109761214 + AluSx SINE Alu 1 273 -39 2125 181 65 117 chr10 30555551 30556231 -109760534 - LTR8A LTR ERV1 -88 639 1 244 237 85 0 chr10 30556802 30556861 -109759904 + MIR SINE MIR 84 147 -61 2246 102 3 3 chr10 30556873 30557167 -109759598 - AluSx SINE Alu -18 294 1 1877 178 0 0 chr10 30557192 30557490 -109759275 - AluJb SINE Alu -14 298 1 1523 79 0 88 chr10 30557819 30558070 -109758695 + AluSq SINE Alu 78 308 0 23 0 0 0 chr10 30558799 30558822 -109757943 + AT_rich Low_complexity Low_complexity 1 23 0 1599 188 14 0 chr10 30558822 30559104 -109757661 - AluJo SINE Alu -26 286 1 2161 114 0 23 chr10 30559176 30559482 -109757283 + AluSg SINE Alu 1 299 -11 2476 72 0 0 chr10 30559823 30560115 -109756650 - AluSq SINE Alu -21 292 1 2393 87 7 0 chr10 30560354 30560654 -109756111 + AluSq SINE Alu 1 302 -11 265 342 40 7 chr10 30561146 30561298 -109755467 - L3 LINE CR1 -159 1418 1262 336 269 50 25 chr10 30561666 30561785 -109754980 - MIR3 SINE MIR -22 186 65 321 121 52 0 chr10 30561918 30561976 -109754789 + L1ME4a LINE L1 6060 6120 -1 1909 142 14 3 chr10 30561993 30562289 -109754476 + AluSx SINE Alu 11 309 -3 738 167 0 15 chr10 30562299 30562431 -109754334 + FLAM_C SINE Alu 1 130 -3 864 75 0 0 chr10 30562431 30562538 -109754227 + U6 snRNA snRNA 1 107 0 2450 77 0 0 chr10 30562949 30563260 -109753505 - AluY SINE Alu 0 311 1 668 228 28 11 chr10 30563274 30563454 -109753311 + L1 LINE L1 2230 2412 -3734 6257 156 17 56 chr10 30563460 30563774 -109752991 + L1 LINE L1 4019 4344 -1802 2446 81 0 7 chr10 30563774 30564082 -109752683 - AluY SINE Alu -4 307 2 6257 156 17 56 chr10 30564082 30565065 -109751700 + L1 LINE L1 4344 5265 -881 2402 85 0 0 chr10 30565266 30565560 -109751205 + AluSp SINE Alu 1 294 -19 181 340 183 13 chr10 30565716 30565869 -109750896 + L2 LINE L2 2578 2756 -558 226 189 176 14 chr10 30566084 30566158 -109750607 + MER5A DNA MER1_type 24 109 -80 1603 160 0 107 chr10 30566200 30566369 -109750396 - AluSx SINE Alu 0 302 185 2032 123 0 33 chr10 30566369 30566669 -109750096 - AluSx SINE Alu -22 290 1 1603 160 0 107 chr10 30566669 30566837 -109749928 - AluSx SINE Alu -117 185 1 1905 172 7 0 chr10 30567192 30567522 -109749243 + AluSx SINE Alu 1 312 0 25 0 0 0 chr10 30567678 30567703 -109749062 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr10 30567764 30567787 -109748978 + AT_rich Low_complexity Low_complexity 1 23 0 2041 120 10 36 chr10 30567810 30568118 -109748647 - AluSx SINE Alu -12 300 1 227 284 25 0 chr10 30568386 30568467 -109748298 + L1ME LINE L1 5533 5615 -506 1700 173 4 0 chr10 30568493 30568765 -109748000 + AluJo SINE Alu 28 300 -12 2071 114 0 7 chr10 30568969 30569258 -109747507 + AluSx SINE Alu 3 289 -23 337 294 40 8 chr10 30569519 30569645 -109747120 - MIR SINE MIR -72 190 61 2164 115 0 7 chr10 30570797 30571093 -109745672 + AluSx SINE Alu 1 294 -18 1920 147 29 3 chr10 30571099 30571411 -109745354 + MER7A DNA MER2_type 1 318 -28 438 169 14 0 chr10 30571512 30571583 -109745182 + MER7A DNA MER2_type 263 334 -3 1053 236 91 15 chr10 30571910 30572308 -109744457 - L1M4 LINE L1 -1432 4714 4287 233 239 0 15 chr10 30572305 30572372 -109744393 - L1MC/D LINE L1 -707 5535 5470 * 328 144 83 23 chr10 30572564 30572610 -109744155 + (TATAG)n Simple_repeat Simple_repeat 1 43 -97 410 76 197 0 chr10 30572610 30572676 -109744089 + MADE1 DNA Mariner 2 80 0 328 144 83 23 chr10 30572676 30572761 -109744004 + (TATAG)n Simple_repeat Simple_repeat 43 140 0 5327 163 29 67 chr10 30572762 30573268 -109743497 - L1MB1 LINE L1 -65 7522 6998 2477 82 0 0 chr10 30573268 30573574 -109743191 - AluY SINE Alu -5 306 1 5327 163 29 67 chr10 30573574 30573754 -109743011 - L1MB1 LINE L1 -589 6998 6813 264 30 0 0 chr10 30573754 30573787 -109742978 + (TG)n Simple_repeat Simple_repeat 2 34 0 5327 163 29 67 chr10 30573787 30574902 -109741863 - L1MB1 LINE L1 -774 6813 5810 2185 91 18 0 chr10 30574902 30575243 -109741522 - AluSg SINE Alu 0 346 1 5327 163 29 67 chr10 30575243 30575414 -109741351 - L1MB1 LINE L1 -1777 5810 5634 1918 269 45 49 chr10 30575418 30576412 -109740353 - L1MB1 LINE L1 -2972 4593 3596 2262 109 0 3 chr10 30576412 30576715 -109740050 + AluSx SINE Alu 1 302 -10 1918 269 45 49 chr10 30576715 30577036 -109739729 - L1MB1 LINE L1 -3969 3596 3275 2114 129 7 0 chr10 30577036 30577355 -109739410 + AluSx SINE Alu 1 321 0 1918 269 45 49 chr10 30577355 30578142 -109738623 - L1MB1 LINE L1 -4290 3275 2542 1839 207 70 27 chr10 30578143 30578583 -109738182 - LTR2B LTR ERV1 0 490 32 1455 227 91 71 chr10 30578587 30578687 -109738078 - L1M3d LINE L1 -4596 1295 1198 1905 144 18 4 chr10 30578687 30579013 -109737752 - AluSx SINE Alu 0 330 1 1455 227 91 71 chr10 30579013 30579121 -109737644 - L1M3d LINE L1 -4693 1198 1094 2018 151 0 10 chr10 30579121 30579420 -109737345 - AluJo SINE Alu -16 296 1 1455 227 91 71 chr10 30579420 30579817 -109736948 - L1M3d LINE L1 -4797 1094 676 1153 284 76 62 chr10 30579972 30580500 -109736265 - L1M3d LINE L1 -5235 656 351 2659 43 0 0 chr10 30580500 30580804 -109735961 - AluY SINE Alu -7 304 1 1153 284 76 62 chr10 30580804 30581153 -109735612 - L1M3d LINE L1 -5540 351 9 189 0 0 0 chr10 30581161 30581182 -109735583 + (TC)n Simple_repeat Simple_repeat 2 22 0 * 333 0 0 0 chr10 30581181 30581218 -109735547 + (TG)n Simple_repeat Simple_repeat 2 38 0 1822 157 34 7 chr10 30581220 30581513 -109735252 - AluSx SINE Alu -11 301 1 1543 169 13 91 chr10 30581516 30581806 -109734959 - L1MC/D LINE L1 -743 5403 5203 2155 145 24 0 chr10 30581806 30582144 -109734621 - MER7A DNA MER2_type 0 346 3 1543 169 13 91 chr10 30582144 30582447 -109734318 - L1MC/D LINE L1 -943 5203 4878 280 267 0 0 chr10 30582593 30582679 -109734086 - MIR SINE MIR -2 260 175 2272 89 20 0 chr10 30582824 30583117 -109733648 + AluSp SINE Alu 1 299 -14 580 216 86 86 chr10 30583139 30583477 -109733288 - L1MC5 LINE L1 -60 7901 7564 2321 164 8 10 chr10 30583573 30583975 -109732790 + L1MB2 LINE L1 5764 6164 -7 450 175 217 0 chr10 30583982 30584102 -109732663 - L2 LINE L2 -609 2705 2560 649 313 32 4 chr10 30584212 30584458 -109732307 + ERVL LTR ERVL 4441 4693 -1071 1497 116 19 107 chr10 30584670 30584806 -109731959 - L1M2 LINE L1 -559 5741 5595 2482 60 0 3 chr10 30584806 30585106 -109731659 - AluY SINE Alu -12 299 1 2330 102 3 0 chr10 30585106 30585411 -109731354 - AluSg SINE Alu -4 306 1 1497 116 19 107 chr10 30585411 30585518 -109731247 - L1M2 LINE L1 -704 5596 5481 2334 97 0 10 chr10 30585518 30585817 -109730948 + AluSx SINE Alu 2 297 -15 1497 116 19 107 chr10 30585817 30585848 -109730917 - L1M2 LINE L1 -819 5481 5491 1967 178 0 0 chr10 30585848 30586151 -109730614 - AluJo SINE Alu -9 303 1 1497 116 19 107 chr10 30586151 30586183 -109730582 - L1M2 LINE L1 -808 5492 5459 342 221 47 35 chr10 30586212 30586298 -109730467 + AluY SINE Alu 1 87 -221 1748 150 7 18 chr10 30586422 30586708 -109730057 + AluSx SINE Alu 21 303 -9 270 81 0 0 chr10 30586720 30586757 -109730008 + (CA)n Simple_repeat Simple_repeat 2 38 0 2503 162 13 49 chr10 30586757 30586917 -109729848 + L1MA6 LINE L1 5792 5956 -344 2158 74 0 45 chr10 30586917 30587227 -109729538 + AluY SINE Alu 1 296 -15 2503 162 13 49 chr10 30587227 30587373 -109729392 + L1MA6 LINE L1 5956 6106 -194 2399 124 14 8 chr10 30587373 30587735 -109729030 - THE1B LTR MaLR 0 364 1 2503 162 13 49 chr10 30587735 30587944 -109728821 + L1MA6 LINE L1 6106 6291 -9 865 118 22 7 chr10 30588651 30588786 -109727979 + FLAM_C SINE Alu 7 143 0 29 28 0 0 chr10 30588903 30588939 -109727826 + AT_rich Low_complexity Low_complexity 1 36 0 1932 153 0 16 chr10 30590025 30590338 -109726427 - AluJb SINE Alu -2 310 3 1992 103 70 4 chr10 30590367 30590639 -109726126 + AluSg SINE Alu 1 290 -20 502 191 197 0 chr10 30590883 30591030 -109725735 + MIR SINE MIR 86 261 -1 484 254 7 36 chr10 30591861 30591999 -109724766 + MER94 DNA DNA 1 134 0 2230 91 0 17 chr10 30592757 30593053 -109723712 + AluSx SINE Alu 13 303 -9 1041 102 32 13 chr10 30593105 30593262 -109723503 + AluSp SINE Alu 1 160 -153 1441 88 6 0 chr10 30593387 30593569 -109723196 + AluSp SINE Alu 113 295 -18 437 301 56 50 chr10 30593578 30593982 -109722783 + L1ME4a LINE L1 5562 5964 -157 1516 97 21 13 chr10 30594173 30594411 -109722354 - LTR7 LTR ERV1 0 450 211 2364 86 0 7 chr10 30594418 30594720 -109722045 - AluY SINE Alu -11 300 1 2506 21 45 3 chr10 30595372 30595662 -109721103 + AluY SINE Alu 1 302 -9 288 158 0 0 chr10 30595735 30595792 -109720973 + T-rich Low_complexity Low_complexity 1 57 0 848 140 0 0 chr10 30595793 30595907 -109720858 - AluSq/x SINE Alu -198 114 1 1693 129 0 24 chr10 30595909 30596164 -109720601 - AluSx SINE Alu -16 296 48 2911 160 39 30 chr10 30596164 30596707 -109720058 + MLT2B3 LTR ERVL 1 548 -6 2094 140 0 7 chr10 30597216 30597516 -109719249 - AluSx SINE Alu -14 298 1 1590 139 64 6 chr10 30597557 30597871 -109718894 + L1PA16 LINE L1 5801 6163 0 1073 154 36 64 chr10 30597871 30598091 -109718674 + AluJo SINE Alu 82 295 -17 2359 101 0 0 chr10 30598093 30598400 -109718365 + AluY SINE Alu 1 307 -4 1747 199 3 3 chr10 30598483 30598785 -109717980 + AluJb SINE Alu 3 304 -8 738 129 11 140 chr10 30598875 30599053 -109717712 + MER20 DNA MER1_type 1 155 -64 609 144 0 0 chr10 30599055 30599152 -109717613 + FRAM SINE Alu 69 165 -11 1872 135 50 4 chr10 30599678 30599959 -109716806 - AluSx SINE Alu -18 294 1 1612 182 18 0 chr10 30600688 30601005 -109715760 - AluJo SINE Alu 0 312 13 500 294 31 0 chr10 30601012 30601175 -109715590 - L1ME LINE L1 -303 5818 5651 266 325 11 0 chr10 30601709 30601801 -109714964 + MER5A DNA MER1_type 25 127 -62 892 192 12 12 chr10 30601858 30602030 -109714735 - AluJo SINE Alu -16 296 125 1984 153 3 3 chr10 30602081 30602376 -109714389 - AluSx SINE Alu -17 295 1 260 248 124 66 chr10 30602704 30602825 -109713940 + MLT1I LTR MaLR 279 406 -3 1989 142 34 0 chr10 30603005 30603300 -109713465 + AluSx SINE Alu 1 305 -7 1997 140 3 3 chr10 30603821 30604114 -109712651 + AluSx SINE Alu 1 293 -19 315 0 0 0 chr10 30604119 30604154 -109712611 + (TG)n Simple_repeat Simple_repeat 2 36 0 911 219 45 0 chr10 30604195 30604373 -109712392 - AluJo SINE Alu -92 220 35 243 61 0 0 chr10 30604376 30604409 -109712356 + (TTG)n Simple_repeat Simple_repeat 1 33 0 428 264 25 0 chr10 30604626 30604747 -109712018 - MER113 DNA MER1_type? -64 457 334 2375 111 40 3 chr10 30604836 30605187 -109711578 - THE1B LTR MaLR 0 364 1 2297 113 8 23 chr10 30605187 30605541 -109711224 - Tigger2 DNA MER2_type -29 2689 2341 629 208 8 0 chr10 30605642 30605903 -109710862 + FRAM SINE Alu 56 417 -142 686 71 0 10 chr10 30605903 30606001 -109710764 + (GGAA)n Simple_repeat Simple_repeat 4 100 0 2334 91 3 7 chr10 30606301 30606599 -109710166 - AluSp SINE Alu -12 301 5 1318 158 8 73 chr10 30606603 30606884 -109709881 - AluJb SINE Alu 0 303 40 2325 95 0 0 chr10 30607415 30607709 -109709056 - AluSx SINE Alu -14 298 5 244 269 39 13 chr10 30608035 30608113 -109708652 + MIR3 SINE MIR 78 157 -51 5209 68 43 1 chr10 30608197 30608890 -109707875 - LTR30 LTR ERV1 0 722 1 2390 83 0 10 chr10 30608954 30609256 -109707509 + AluSc SINE Alu 1 299 -10 1219 98 0 11 chr10 30609502 30609676 -109707089 - AluY SINE Alu -12 299 128 1541 213 174 8 chr10 30609795 30610273 -109706492 - L1M4c LINE L1 -2900 3948 3392 1183 180 19 161 chr10 30610297 30610397 -109706368 + MLT1A1 LTR MaLR 1 114 -251 2339 64 0 38 chr10 30610397 30610710 -109706055 - AluY SINE Alu -10 301 1 1183 180 19 161 chr10 30610710 30611031 -109705734 + MLT1A1 LTR MaLR 114 362 -3 2377 72 13 3 chr10 30611036 30611340 -109705425 + AluSp SINE Alu 1 307 -6 1966 211 105 49 chr10 30611349 30612247 -109704518 - L1M4c LINE L1 -4002 3027 1871 2261 101 3 3 chr10 30612671 30612968 -109703797 - AluSp SINE Alu -16 297 1 1651 157 17 20 chr10 30613669 30613968 -109702797 + AluSx SINE Alu 1 298 -14 2768 252 104 34 chr10 30614343 30614514 -109702251 - L2 LINE L2 -287 3026 2869 2264 98 7 3 chr10 30614514 30614821 -109701944 + AluSc SINE Alu 1 308 -1 2768 252 104 34 chr10 30614821 30615748 -109701017 - L2 LINE L2 -444 2869 1826 1895 152 7 3 chr10 30615802 30616092 -109700673 - AluSx SINE Alu -21 291 1 979 170 0 6 chr10 30616099 30616258 -109700507 - FRAM SINE Alu -25 151 1 1732 137 10 17 chr10 30617127 30617420 -109699345 + AluJo SINE Alu 1 291 -21 318 305 118 78 chr10 30617634 30618031 -109698734 - L1M4c LINE L1 -5878 971 559 237 108 0 0 chr10 30618382 30618489 -109698276 + (CGG)n Simple_repeat Simple_repeat 1 107 0 1160 100 18 118 chr10 30618682 30618794 -109697971 + LOR1a LTR ERV1 300 382 -115 2312 78 0 0 chr10 30618794 30619105 -109697660 + AluY SINE Alu 1 311 0 1160 100 18 118 chr10 30619105 30619211 -109697554 + LOR1a LTR ERV1 382 497 0 713 186 7 57 chr10 30619703 30619843 -109696922 + FLAM_A SINE Alu 1 133 0 2205 98 0 0 chr10 30619849 30620126 -109696639 + AluSg1 SINE Alu 1 277 -32 1236 51 17 11 chr10 30620127 30620304 -109696461 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 962 244 96 94 chr10 30620662 30621013 -109695752 + LTR16A LTR ERVL 18 372 -78 5532 83 4 24 chr10 30621013 30621178 -109695587 - L1MA2 LINE L1 -7 6297 6130 2415 51 0 41 chr10 30621178 30621493 -109695272 - AluY SINE Alu -9 302 1 5532 83 4 24 chr10 30621493 30622078 -109694687 - L1MA2 LINE L1 -174 6130 5562 962 244 96 94 chr10 30622078 30622152 -109694613 + LTR16A LTR ERVL 372 444 -6 224 205 0 0 chr10 30622765 30622804 -109693961 + polypurine Low_complexity Low_complexity 3 41 0 2298 122 0 0 chr10 30622834 30623146 -109693619 + AluSx SINE Alu 1 312 0 2261 74 7 17 chr10 30623212 30623510 -109693255 + AluY SINE Alu 1 295 -16 21 0 0 0 chr10 30623649 30623670 -109693095 + AT_rich Low_complexity Low_complexity 1 21 0 1877 150 0 10 chr10 30624200 30624494 -109692271 + AluJo SINE Alu 1 291 -21 2080 129 13 10 chr10 30624845 30625156 -109691609 + AluSx SINE Alu 1 312 0 410 226 0 12 chr10 30625301 30625385 -109691380 + MLT1F1 LTR MaLR 1 83 -484 1879 163 0 10 chr10 30625398 30625704 -109691061 + AluJb SINE Alu 3 305 -7 270 0 0 0 chr10 30626310 30626340 -109690425 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 557 199 24 12 chr10 30626607 30626773 -109689992 + GA-rich Low_complexity Low_complexity 2 169 0 1048 254 79 3 chr10 30626773 30627064 -109689701 - LTR16B LTR ERVL -151 313 1 209 0 97 0 chr10 30627386 30627417 -109689348 + A-rich Low_complexity Low_complexity 2 35 0 828 164 0 0 chr10 30627749 30627877 -109688888 - FLAM_C SINE Alu -4 139 12 258 283 0 0 chr10 30628634 30628687 -109688078 + AluS SINE Alu 5 57 -246 4106 184 68 15 chr10 30628834 30630084 -109686681 + L1MB5 LINE L1 4851 6166 -8 1762 169 108 19 chr10 30630120 30630180 -109686585 - MSTD LTR MaLR -2 394 341 2214 91 3 14 chr10 30630180 30630476 -109686289 + AluSg SINE Alu 1 293 -17 1762 169 108 19 chr10 30630476 30630777 -109685988 - MSTD LTR MaLR -55 341 1 340 313 40 73 chr10 30630778 30631053 -109685712 + L2 LINE L2 2158 2423 -891 491 257 151 18 chr10 30631053 30631271 -109685494 - MIR SINE MIR -12 250 4 392 342 89 0 chr10 30631271 30631472 -109685293 + L2 LINE L2 2423 2641 -673 28 0 0 0 chr10 30631491 30631519 -109685246 + AT_rich Low_complexity Low_complexity 1 28 0 1886 232 164 12 chr10 30631698 30632288 -109684477 + L2 LINE L2 615 1294 -2020 1792 209 8 16 chr10 30632290 30632653 -109684112 - MLT1A1 LTR MaLR -5 360 1 1240 242 60 56 chr10 30632695 30632921 -109683844 + L2 LINE L2 1332 1555 -1759 779 221 118 31 chr10 30632921 30632998 -109683767 + MER58C DNA MER1_type 4 73 -2347 2322 100 7 3 chr10 30632998 30633307 -109683458 - AluSg SINE Alu 0 310 1 779 221 118 31 chr10 30633307 30633424 -109683341 + MER58C DNA MER1_type 73 215 0 1240 242 60 56 chr10 30633424 30633644 -109683121 + L2 LINE L2 1555 1780 -1534 27 0 0 0 chr10 30633646 30633673 -109683092 + AT_rich Low_complexity Low_complexity 1 27 0 387 315 73 12 chr10 30633681 30633846 -109682919 + L2 LINE L2 3138 3312 -1 408 203 0 0 chr10 30634161 30634230 -109682535 + MER5A DNA MER1_type 5 73 -116 963 252 76 74 chr10 30635078 30635280 -109681485 + MLT1J LTR MaLR 22 222 -289 2632 45 0 0 chr10 30635280 30635589 -109681176 - AluY SINE Alu -2 309 1 963 252 76 74 chr10 30635589 30635834 -109680931 + MLT1J LTR MaLR 222 470 -41 2543 44 0 13 chr10 30635908 30636206 -109680559 + AluY SINE Alu 1 294 -17 437 30 0 30 chr10 30636249 30636316 -109680449 + L1PA15 LINE L1 6101 6165 0 21 57 0 19 chr10 30636385 30636406 -109680359 + AT_rich Low_complexity Low_complexity 1 21 -31 2405 67 0 3 chr10 30636406 30636705 -109680060 + AluY SINE Alu 1 298 -13 21 57 0 19 chr10 30636705 30636736 -109680029 + AT_rich Low_complexity Low_complexity 21 52 0 2207 99 10 0 chr10 30637361 30637653 -109679112 - AluSc SINE Alu -14 295 1 333 313 112 33 chr10 30637773 30637987 -109678778 + MIR SINE MIR 2 232 -30 206 222 14 83 chr10 30638322 30638394 -109678371 + MER5B DNA MER1_type 109 175 -3 271 314 73 36 chr10 30638415 30638552 -109678213 + L2 LINE L2 1102 1243 -2071 * 1072 260 116 23 chr10 30638542 30639031 -109677734 - L2 LINE L2 -148 3165 2616 463 249 11 115 chr10 30639399 30639618 -109677147 + MER20B DNA MER1_type 1 202 -17 455 332 56 12 chr10 30639639 30639889 -109676876 + L2 LINE L2 1887 2147 -1167 709 254 12 0 chr10 30639889 30640054 -109676711 + L1M4 LINE L1 1 167 -6375 289 172 46 9 chr10 30640055 30640208 -109676557 + AluSq SINE Alu 2 197 -106 1950 139 10 3 chr10 30640234 30640528 -109676237 + AluSx SINE Alu 2 297 -15 1962 113 13 23 chr10 30642327 30642627 -109674138 + AluSx SINE Alu 1 297 -15 186 154 128 26 chr10 30643979 30644018 -109672747 - L2 LINE L2 -2 3270 3228 2208 112 7 0 chr10 30644669 30644972 -109671793 + AluSx SINE Alu 1 305 -7 1113 197 143 65 chr10 30644976 30645255 -109671510 + AluJo SINE Alu 2 302 0 1913 148 37 3 chr10 30645929 30646227 -109670538 - AluSq SINE Alu -5 308 1 659 100 27 55 chr10 30647785 30647895 -109668870 - AluSg/x SINE Alu 0 309 203 189 308 15 31 chr10 30648002 30648067 -109668698 - MIR SINE MIR -70 192 129 768 324 172 16 chr10 30648124 30648646 -109668119 + L2 LINE L2 2508 3110 -203 226 275 78 56 chr10 30649244 30649386 -109667379 + L2 LINE L2 3150 3294 -19 304 233 27 14 chr10 30649484 30649557 -109667208 - MER5A DNA MER1_type -75 114 41 1160 184 93 48 chr10 30649589 30649899 -109666866 - MER33 DNA MER1_type 0 324 1 1706 149 29 7 chr10 30650271 30650546 -109666219 - AluSx SINE Alu -27 285 5 217 281 247 27 chr10 30650744 30650890 -109665875 + MIR SINE MIR 49 226 -36 2049 86 86 4 chr10 30651149 30651428 -109665337 + AluSx SINE Alu 1 302 -10 271 305 39 39 chr10 30651448 30651576 -109665189 + MER5B DNA MER1_type 2 129 -49 2009 108 42 0 chr10 30651577 30651865 -109664900 + AluSp SINE Alu 1 300 -13 2279 98 0 0 chr10 30653620 30653917 -109662848 + AluSq SINE Alu 1 297 -16 23 33 0 0 chr10 30654240 30654270 -109662495 + AT_rich Low_complexity Low_complexity 1 30 0 2310 99 0 10 chr10 30654277 30654591 -109662174 - AluSq SINE Alu -2 311 1 603 214 56 0 chr10 30655119 30655245 -109661520 + MER3 DNA MER1_type 1 133 -76 1722 191 0 25 chr10 30655250 30655564 -109661201 - AluJb SINE Alu -4 308 3 1897 128 7 20 chr10 30656250 30656548 -109660217 + AluSg SINE Alu 1 294 -16 306 317 147 5 chr10 30657881 30658105 -109658660 + MARNA DNA Mariner 185 440 -146 315 0 0 0 chr10 30658152 30658187 -109658578 + (TG)n Simple_repeat Simple_repeat 2 36 0 2038 108 47 17 chr10 30658187 30658483 -109658282 - AluSx SINE Alu -7 305 1 207 0 0 0 chr10 30659213 30659236 -109657529 + (T)n Simple_repeat Simple_repeat 1 23 0 204 206 0 0 chr10 30659257 30659291 -109657474 + MIR3 SINE MIR 148 181 -27 1697 172 66 30 chr10 30660054 30660239 -109656526 - MER2 DNA MER2_type 0 344 140 1897 148 7 7 chr10 30660239 30660536 -109656229 - AluSx SINE Alu -15 297 1 1697 172 66 30 chr10 30660536 30660682 -109656083 - MER2 DNA MER2_type -204 140 1 254 319 107 37 chr10 30660980 30661330 -109655435 + L2 LINE L2 2647 3070 -202 362 252 44 30 chr10 30661380 30661515 -109655250 + L2 LINE L2 2344 2480 -834 332 244 248 54 chr10 30661495 30661753 -109655012 + L2 LINE L2 2624 2931 -383 * 1198 151 25 29 chr10 30661755 30662000 -109654765 - MER31A LTR ERV1 -2 483 240 561 192 51 112 chr10 30662000 30662214 -109654551 + MLT1A2 LTR MaLR 1 201 -173 561 194 16 47 chr10 30662196 30662325 -109654440 + MSTD LTR MaLR 265 389 -7 597 160 0 0 chr10 30662325 30662419 -109654346 - MER31A LTR ERV1 -240 245 152 2775 194 58 25 chr10 30662420 30663474 -109653291 - L1M2 LINE L1 -628 5684 4595 1590 191 10 14 chr10 30663781 30664075 -109652690 + AluJb SINE Alu 1 293 -19 2202 121 0 0 chr10 30664160 30664457 -109652308 + AluY SINE Alu 1 297 -14 1045 187 87 4 chr10 30664623 30664864 -109651901 - MER93a LTR ERV1 -24 378 118 22 35 0 0 chr10 30664924 30664953 -109651812 + AT_rich Low_complexity Low_complexity 1 29 0 184 342 13 63 chr10 30665421 30665500 -109651265 - L2 LINE L2 -37 3235 3161 261 0 0 0 chr10 30665504 30665533 -109651232 + (TG)n Simple_repeat Simple_repeat 2 30 0 483 261 167 74 chr10 30665557 30665849 -109650916 - L2 LINE L2 -159 3154 2806 1117 216 119 41 chr10 30665849 30666261 -109650504 - LTR56 LTR ERV1 -1 444 1 483 261 167 74 chr10 30666261 30666401 -109650364 - L2 LINE L2 -507 2806 2680 1383 161 23 87 chr10 30666427 30666726 -109650039 + AluJb SINE Alu 1 280 -32 553 228 108 56 chr10 30666751 30667001 -109649764 - L2 LINE L2 -860 2454 2192 431 229 56 49 chr10 30667040 30667184 -109649581 - MER58B DNA MER1_type 0 341 197 606 244 87 87 chr10 30667229 30667540 -109649225 - L2 LINE L2 -1145 2169 1859 1628 160 11 22 chr10 30668016 30668291 -109648474 + MER1B DNA MER1_type 3 274 -65 2062 123 7 7 chr10 30668431 30668723 -109648042 - AluSx SINE Alu -20 292 1 961 110 0 0 chr10 30669445 30669572 -109647193 - AluSq/x SINE Alu -185 127 1 1965 106 3 70 chr10 30669937 30670266 -109646499 - AluSc SINE Alu -2 307 1 1466 157 96 4 chr10 30670362 30670647 -109646118 + AluJb SINE Alu 1 309 0 2527 200 98 35 chr10 30671037 30671722 -109645043 - L1MD2 LINE L1 -20 6339 5612 1142 120 0 18 chr10 30671738 30671905 -109644860 - FRAM SINE Alu -13 163 1 182 257 158 69 chr10 30672516 30672617 -109644148 + L2 LINE L2 3200 3309 -4 958 229 66 83 chr10 30672902 30673506 -109643259 - HAL1b LINE L1 -754 594 1 1660 159 61 14 chr10 30674110 30674405 -109642360 - AluJo SINE Alu -3 309 1 1913 142 0 16 chr10 30674742 30674915 -109641850 - AluSg SINE Alu -6 304 137 1424 58 16 0 chr10 30674915 30675104 -109641661 - L1PA5 LINE L1 -1 6153 5962 1913 142 0 16 chr10 30675104 30675239 -109641526 - AluSg SINE Alu -173 137 1 249 268 125 48 chr10 30676935 30677103 -109639662 - L2 LINE L2 -1 3312 3132 1927 99 99 3 chr10 30677314 30677597 -109639168 - AluSx SINE Alu -2 310 1 22 35 0 0 chr10 30678265 30678294 -109638471 + AT_rich Low_complexity Low_complexity 1 29 0 2266 101 0 0 chr10 30678426 30678722 -109638043 + AluSg SINE Alu 3 298 -12 314 186 105 35 chr10 30678729 30678815 -109637950 - L2 LINE L2 -208 3105 3014 2124 120 3 0 chr10 30678897 30679196 -109637569 + AluSq SINE Alu 1 300 -13 261 155 2 56 chr10 30679516 30679576 -109637189 - FLAM SINE Alu -12 121 72 885 204 40 22 chr10 30679611 30679836 -109636929 - L1MB8 LINE L1 -125 6053 5825 1914 202 65 61 chr10 30680072 30680518 -109636247 - L1MB8 LINE L1 -9 6169 5726 1820 125 50 7 chr10 30680518 30680815 -109635950 - AluSg SINE Alu 0 310 1 1964 139 0 3 chr10 30680823 30681111 -109635654 - AluSx SINE Alu -25 287 1 1914 202 65 61 chr10 30681111 30681210 -109635555 - L1MB8 LINE L1 -458 5720 5613 192 40 0 0 chr10 30681308 30681333 -109635432 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 1321 119 9 22 chr10 30681467 30681694 -109635071 - L1PA16 LINE L1 -7 6159 5936 1503 191 61 16 chr10 30681742 30682159 -109634606 - L1MB8 LINE L1 -570 5608 5172 1838 161 56 3 chr10 30682214 30682536 -109634229 + MER7A DNA MER2_type 10 346 0 236 242 32 16 chr10 30682829 30682891 -109633874 - MER20B DNA MER1_type -352 431 369 268 188 333 21 chr10 30682956 30683052 -109633713 - MER20B DNA MER1_type -435 348 223 936 205 151 0 chr10 30683155 30683414 -109633351 - MER33 DNA MER1_type -25 299 2 185 319 0 42 chr10 30684168 30684240 -109632525 + MER5A DNA MER1_type 4 72 -117 1595 179 21 14 chr10 30684244 30684543 -109632222 + AluSx SINE Alu 1 301 0 2268 203 49 79 chr10 30687202 30687621 -109629144 - MER68 LTR ERV1 -8 554 155 714 178 31 0 chr10 30687621 30687750 -109629015 - FLAM_A SINE Alu 0 133 1 2268 203 49 79 chr10 30687750 30687901 -109628864 - MER68 LTR ERV1 -407 155 1 1873 88 4 31 chr10 30687910 30688197 -109628568 - AluSx SINE Alu 0 312 33 186 291 128 23 chr10 30688644 30688730 -109628035 + L2 LINE L2 2229 2323 -991 192 409 54 21 chr10 30688803 30688989 -109627776 + L2 LINE L2 2552 2743 -571 194 273 91 0 chr10 30690241 30690296 -109626469 - L2 LINE L2 -17 3296 3237 237 381 126 14 chr10 30690411 30690944 -109625821 - L2 LINE L2 -5 3267 2668 1819 114 96 0 chr10 30691177 30691449 -109625316 + AluSx SINE Alu 1 298 -14 325 245 293 0 chr10 30691456 30691668 -109625097 - LTR50 LTR ERVL -43 752 479 409 202 73 18 chr10 30691740 30691849 -109624916 - LTR50 LTR ERVL -666 129 15 186 133 0 0 chr10 30691896 30691926 -109624839 + (T)n Simple_repeat Simple_repeat 1 30 0 1624 158 9 53 chr10 30692765 30693087 -109623678 + AluJo SINE Alu 5 312 0 666 183 0 0 chr10 30693348 30693463 -109623302 + FLAM_A SINE Alu 1 115 -18 1198 169 164 50 chr10 30693500 30693884 -109622881 - Charlie1b DNA MER1_type -94 429 2 230 327 35 26 chr10 30694841 30694954 -109621811 + MIR SINE MIR 34 147 -61 703 109 138 52 chr10 30695104 30695278 -109621487 - L1MA5A LINE L1 -2 6295 6107 1870 162 30 0 chr10 30696406 30696703 -109620062 + AluJb SINE Alu 1 306 -6 21 57 0 0 chr10 30697051 30697086 -109619679 + AT_rich Low_complexity Low_complexity 1 35 0 1491 153 99 11 chr10 30697946 30698228 -109618537 + AluJo SINE Alu 3 309 -3 2118 127 3 3 chr10 30698709 30699009 -109617756 + AluSc SINE Alu 1 300 -9 314 264 81 34 chr10 30699124 30699272 -109617493 - L1ME4a LINE L1 -123 5998 5844 248 286 48 24 chr10 30699300 30699384 -109617381 - L1ME4a LINE L1 -2015 5793 5708 1717 99 144 4 chr10 30699853 30700116 -109616649 + AluSx SINE Alu 1 300 -12 679 197 40 26 chr10 30700265 30700417 -109616348 - MER20B DNA MER1_type -1 218 65 23 54 0 0 chr10 30701738 30701775 -109614990 + AT_rich Low_complexity Low_complexity 1 37 0 605 200 0 0 chr10 30704330 30704435 -109612330 - FLAM_C SINE Alu -38 105 1 320 250 143 0 chr10 30705697 30705781 -109610984 + L2 LINE L2 3207 3302 -11 450 254 113 14 chr10 30707071 30707284 -109609481 + L1M4 LINE L1 5127 5360 -786 3678 198 72 18 chr10 30707291 30708436 -109608329 + L1MB4 LINE L1 4970 6179 -1 1252 123 128 0 chr10 30709508 30709711 -109607054 + MER30 DNA MER1_type 2 230 0 2331 72 0 7 chr10 30710018 30710310 -109606455 + AluY SINE Alu 1 290 -21 474 65 0 0 chr10 30710310 30710372 -109606393 + (TA)n Simple_repeat Simple_repeat 2 63 0 22 70 0 0 chr10 30710446 30710489 -109606276 + AT_rich Low_complexity Low_complexity 1 43 0 1783 146 46 4 chr10 30710817 30711098 -109605667 + AluSx SINE Alu 1 293 -19 201 333 0 0 chr10 30711598 30711646 -109605119 - L3 LINE CR1 -15 1562 1515 190 296 148 0 chr10 30711658 30711746 -109605019 - MER5A DNA MER1_type -21 168 68 * 217 250 143 93 chr10 30711663 30711803 -109604962 + MER5B DNA MER1_type 29 175 -3 182 265 103 15 chr10 30711835 30711903 -109604862 - MIR SINE MIR -119 143 70 1529 166 63 11 chr10 30712415 30712699 -109604066 - AluJb SINE Alu -9 303 5 922 271 80 23 chr10 30713057 30713545 -109603220 - L1ME LINE L1 -419 5743 5230 185 275 87 14 chr10 30714296 30714365 -109602400 + MIR SINE MIR 72 145 -117 1755 136 0 4 chr10 30715490 30715748 -109601017 + AluSx SINE Alu 44 300 -12 1311 170 70 4 chr10 30715974 30716203 -109600562 + AluJb SINE Alu 1 244 -68 2221 97 27 7 chr10 30716294 30716592 -109600173 - AluSq SINE Alu -9 304 1 578 161 145 16 chr10 30719369 30719493 -109597272 + AluJo SINE Alu 2 141 -171 1436 153 13 4 chr10 30719493 30719729 -109597036 + AluSx SINE Alu 41 278 -34 582 222 90 21 chr10 30719741 30719885 -109596880 + AluJo SINE Alu 140 293 -19 2426 28 43 0 chr10 30720478 30720760 -109596005 - AluY SINE Alu -17 294 1 1463 199 24 17 chr10 30721680 30721976 -109594789 - MARNA DNA Mariner -39 547 250 2046 138 0 16 chr10 30723163 30723467 -109593298 + AluSx SINE Alu 1 299 -13 2317 105 0 3 chr10 30725364 30725669 -109591096 + AluSx SINE Alu 1 304 -8 22 35 0 0 chr10 30725758 30725787 -109590978 + AT_rich Low_complexity Low_complexity 1 29 0 29 0 0 0 chr10 30725812 30725841 -109590924 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr10 30726322 30726349 -109590416 + AT_rich Low_complexity Low_complexity 1 27 0 192 77 0 0 chr10 30727531 30727557 -109589208 + (TTC)n Simple_repeat Simple_repeat 2 27 0 180 0 0 0 chr10 30727583 30727603 -109589162 + (T)n Simple_repeat Simple_repeat 1 20 0 2431 78 3 0 chr10 30728248 30728544 -109588221 - AluSp SINE Alu -16 297 1 195 100 0 0 chr10 30728782 30728812 -109587953 + (C)n Simple_repeat Simple_repeat 1 30 0 304 298 233 20 chr10 30729629 30730136 -109586629 + L2 LINE L2 2184 2798 -516 523 167 115 0 chr10 30730280 30730376 -109586389 + FLAM_C SINE Alu 2 108 -35 220 300 44 11 chr10 30731293 30731383 -109585382 + L2 LINE L2 3208 3300 -13 1020 141 107 5 chr10 30731592 30731798 -109584967 + L1MA5A LINE L1 5382 5608 -689 1032 160 0 0 chr10 30731799 30731955 -109584810 + AluSg/x SINE Alu 135 290 -20 2176 138 126 20 chr10 30731961 30732412 -109584353 + L1MA5A LINE L1 5600 6098 -199 1996 94 11 120 chr10 30732417 30732767 -109583998 - AluSx SINE Alu 0 312 1 647 282 40 20 chr10 30733840 30734088 -109582677 - L1MC4 LINE L1 0 8042 7790 2192 119 7 0 chr10 30734088 30734383 -109582382 + AluSx SINE Alu 1 297 -15 458 263 57 99 chr10 30735767 30735902 -109580863 + L2 LINE L2 2945 3084 -229 2347 110 0 0 chr10 30735902 30736210 -109580555 - AluSx SINE Alu -4 308 1 458 263 57 99 chr10 30736210 30736427 -109580338 + L2 LINE L2 3084 3282 -31 1398 180 94 8 chr10 30736427 30736694 -109580071 + AluJo SINE Alu 2 291 -21 458 263 57 99 chr10 30736694 30736724 -109580041 + L2 LINE L2 3282 3312 -1 1820 149 11 4 chr10 30737356 30737664 -109579101 - AluJo SINE Alu 0 310 1 1284 126 23 96 chr10 30738081 30738342 -109578423 + AluJo SINE Alu 71 312 0 1629 193 20 13 chr10 30738482 30738782 -109577983 - AluJb SINE Alu -10 302 1 225 333 11 0 chr10 30738800 30738890 -109577875 + MIR SINE MIR 170 260 -2 246 128 0 0 chr10 30739353 30739392 -109577373 + (TG)n Simple_repeat Simple_repeat 2 40 0 2323 103 3 0 chr10 30739445 30739757 -109577008 + AluSp SINE Alu 1 313 0 2653 127 16 35 chr10 30739826 30740260 -109576505 - MSTB LTR MaLR 0 426 1 1915 138 32 0 chr10 30740907 30741189 -109575576 - AluSx SINE Alu -21 291 1 1249 243 63 69 chr10 30741189 30741556 -109575209 - L2 LINE L2 -3 3310 2942 1688 151 35 28 chr10 30741556 30741841 -109574924 + AluJo SINE Alu 6 292 -20 1249 243 63 69 chr10 30741841 30742372 -109574393 - L2 LINE L2 -371 2942 2400 2186 135 3 0 chr10 30742617 30742928 -109573837 + AluSx SINE Alu 1 312 0 276 243 29 107 chr10 30743381 30743485 -109573280 - MER94 DNA DNA -1 133 41 2372 99 3 0 chr10 30743485 30743787 -109572978 + AluSx SINE Alu 5 307 -5 276 243 29 107 chr10 30743787 30743822 -109572943 - MER94 DNA DNA -93 41 5 21 0 0 0 chr10 30744346 30744367 -109572398 + AT_rich Low_complexity Low_complexity 1 21 0 1829 148 24 3 chr10 30744367 30744658 -109572107 + AluJo SINE Alu 1 297 -15 210 171 0 0 chr10 30744736 30744771 -109571994 + (TA)n Simple_repeat Simple_repeat 2 36 0 457 248 55 108 chr10 30744814 30745349 -109571416 - L1MC4a LINE L1 -449 5672 5441 3962 161 20 56 chr10 30745550 30745600 -109571165 - L1MB1 LINE L1 -1 6167 6117 2311 99 3 3 chr10 30745600 30745903 -109570862 - AluSq SINE Alu -10 303 1 3962 161 20 56 chr10 30745903 30746212 -109570553 - L1MB1 LINE L1 -51 6117 5798 1997 147 7 0 chr10 30746212 30746511 -109570254 - AluSx SINE Alu -11 301 1 3962 161 20 56 chr10 30746511 30746956 -109569809 - L1MB1 LINE L1 -370 5798 5391 1300 181 50 32 chr10 30746956 30747233 -109569532 + MSTB1 LTR MaLR 1 282 -150 349 284 43 43 chr10 30747270 30747432 -109569333 + MIR SINE MIR 50 211 -51 2148 108 0 33 chr10 30747714 30748020 -109568745 - AluSx SINE Alu -12 300 5 2308 114 10 0 chr10 30748476 30748782 -109567983 + AluSq SINE Alu 1 309 -4 1592 165 71 8 chr10 30749097 30749364 -109567401 + AluJb SINE Alu 1 284 -28 1816 161 0 20 chr10 30750360 30750659 -109566106 + AluJb SINE Alu 1 293 -19 2127 106 17 7 chr10 30750730 30751022 -109565743 - AluSx SINE Alu -16 296 2 1349 191 53 38 chr10 30752055 30752083 -109564682 - L1M4 LINE L1 -3149 2997 2971 1610 182 0 45 chr10 30752083 30752239 -109564526 - AluJo SINE Alu -13 299 162 2293 65 0 68 chr10 30752239 30752562 -109564203 - AluY SINE Alu -10 301 1 1610 182 0 45 chr10 30752562 30752718 -109564047 - AluJo SINE Alu -150 162 1 1349 191 53 38 chr10 30752718 30752800 -109563965 - L1M4 LINE L1 -3175 2971 2892 218 56 28 0 chr10 30752800 30752836 -109563929 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2254 102 10 0 chr10 30752838 30753133 -109563632 - AluSp SINE Alu -15 298 1 1349 191 53 38 chr10 30753133 30753359 -109563406 - L1M4 LINE L1 -3254 2892 2652 566 156 128 18 chr10 30753399 30753508 -109563257 - FLAM_C SINE Alu -16 127 7 382 236 146 14 chr10 30753523 30753667 -109563098 - L1M4 LINE L1 -3536 2610 2448 6722 134 13 36 chr10 30753736 30754737 -109562028 - L1MA5A LINE L1 0 6297 5367 2046 130 7 0 chr10 30754737 30755029 -109561736 - AluSx SINE Alu -18 294 1 6722 134 13 36 chr10 30755029 30756056 -109560709 - L1MA5A LINE L1 -930 5367 4318 2480 71 0 0 chr10 30756056 30756366 -109560399 + AluY SINE Alu 2 311 0 2022 116 3 27 chr10 30756386 30756679 -109560086 + AluSx SINE Alu 9 294 -18 2270 105 0 0 chr10 30756679 30756984 -109559781 + AluY SINE Alu 1 305 -6 306 239 15 0 chr10 30756987 30757054 -109559711 - MER106A DNA MER1_type -168 68 1 647 265 106 50 chr10 30757064 30757404 -109559361 + L2 LINE L2 2915 3279 -34 2360 102 0 10 chr10 30757404 30757709 -109559056 - AluSp SINE Alu -11 302 1 647 265 106 50 chr10 30757709 30757746 -109559019 + L2 LINE L2 3279 3313 0 2287 103 7 0 chr10 30757885 30758185 -109558580 + AluSq SINE Alu 1 302 -11 2290 88 7 3 chr10 30759598 30759893 -109556872 - AluSx SINE Alu -14 298 3 23 33 0 0 chr10 30759904 30759934 -109556831 + AT_rich Low_complexity Low_complexity 1 30 0 1662 175 3 34 chr10 30759934 30760231 -109556534 - AluJo SINE Alu -24 288 1 2226 93 0 10 chr10 30760503 30760792 -109555973 + AluSx SINE Alu 13 298 -14 1752 77 3 181 chr10 30761347 30761480 -109555285 + AluSx SINE Alu 1 156 -157 4750 42 4 14 chr10 30761480 30762033 -109554732 + SVA Other Other 835 1381 -5 1752 77 3 181 chr10 30762033 30762275 -109554490 + AluSx SINE Alu 156 313 0 228 35 0 0 chr10 30762379 30762408 -109554357 + (TG)n Simple_repeat Simple_repeat 2 30 0 896 159 0 0 chr10 30762715 30762847 -109553918 + AluJo/FLAM SINE Alu 2 133 -169 2083 110 4 0 chr10 30762847 30763128 -109553637 + AluSp SINE Alu 21 302 -11 2443 80 0 0 chr10 30763472 30763783 -109552982 + AluSq SINE Alu 1 311 -2 371 85 34 0 chr10 30763787 30763846 -109552919 + A-rich Low_complexity Low_complexity 4 64 0 2080 112 3 7 chr10 30763858 30764163 -109552602 + AluSx SINE Alu 3 306 -6 237 292 75 74 chr10 30764201 30764457 -109552308 + MIR3 SINE MIR 4 262 0 385 174 14 0 chr10 30764629 30764698 -109552067 + MER5A DNA MER1_type 1 70 -119 2110 128 3 0 chr10 30764745 30765050 -109551715 - AluSx SINE Alu -5 307 2 2342 81 0 0 chr10 30765052 30765350 -109551415 - AluSx SINE Alu -14 298 1 1566 119 56 8 chr10 30765898 30766177 -109550588 + AluSx SINE Alu 21 311 0 810 172 0 8 chr10 30766202 30766336 -109550429 - AluJo SINE Alu -174 138 6 659 214 24 0 chr10 30766474 30766600 -109550165 + MER5A DNA MER1_type 61 189 0 227 340 80 43 chr10 30766715 30766877 -109549888 - MIR3 SINE MIR -23 185 18 2127 181 65 117 chr10 30767045 30767127 -109549638 - LTR8A LTR ERV1 -3 724 639 1946 121 0 0 chr10 30767127 30767400 -109549365 + AluSx SINE Alu 1 273 -39 2127 181 65 117 chr10 30767400 30768080 -109548685 - LTR8A LTR ERV1 -88 639 1 268 237 85 0 chr10 30768651 30768710 -109548055 + MIR SINE MIR 84 147 -61 2118 102 3 3 chr10 30768722 30769016 -109547749 - AluSx SINE Alu -18 294 1 23 0 0 0 chr10 30769018 30769041 -109547724 + AT_rich Low_complexity Low_complexity 1 23 0 1773 174 0 0 chr10 30769041 30769339 -109547426 - AluJb SINE Alu -14 298 1 1396 88 0 88 chr10 30769668 30769919 -109546846 + AluSq SINE Alu 78 308 0 23 0 0 0 chr10 30770647 30770670 -109546095 + AT_rich Low_complexity Low_complexity 1 23 0 1491 188 14 0 chr10 30770670 30770952 -109545813 - AluJo SINE Alu -26 286 1 2051 111 0 23 chr10 30771024 30771330 -109545435 + AluSg SINE Alu 1 299 -11 2342 72 0 0 chr10 30771671 30771963 -109544802 - AluSq SINE Alu -21 292 1 2304 90 6 0 chr10 30772202 30772513 -109544252 + AluSq SINE Alu 1 313 0 336 338 46 7 chr10 30773001 30773152 -109543613 - L3 LINE CR1 -159 1418 1262 383 257 42 69 chr10 30773520 30773664 -109543101 - MIR3 SINE MIR -22 186 47 315 121 52 0 chr10 30773772 30773830 -109542935 + L1ME4a LINE L1 6060 6120 -1 1796 142 14 3 chr10 30773847 30774143 -109542622 + AluSx SINE Alu 11 309 -3 753 165 0 15 chr10 30774153 30774286 -109542479 + FLAM_C SINE Alu 1 131 -2 864 75 0 0 chr10 30774286 30774393 -109542372 + U6 snRNA snRNA 1 107 0 24 0 0 0 chr10 30775196 30775220 -109541545 + GC_rich Low_complexity Low_complexity 1 24 0 200 351 18 0 chr10 30776729 30776786 -109539979 - MIR SINE MIR -113 149 92 1745 155 18 0 chr10 30776805 30777117 -109539648 + AluSx SINE Alu 3 319 0 1176 171 9 0 chr10 30777120 30777336 -109539429 + AluJb SINE Alu 84 301 -11 1687 149 0 0 chr10 30777401 30777663 -109539102 - AluSx SINE Alu -40 272 11 1994 125 24 0 chr10 30778200 30778489 -109538276 - AluSx SINE Alu -16 296 1 234 100 0 0 chr10 30778518 30778548 -109538217 + U2 snRNA snRNA 1 30 -158 817 182 14 0 chr10 30778566 30778714 -109538051 - FRAM SINE Alu -17 159 10 600 148 0 0 chr10 30778720 30778808 -109537957 - AluJ/FLAM SINE Alu -223 89 2 207 0 0 0 chr10 30779409 30779432 -109537333 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1165 199 96 4 chr10 30779839 30780100 -109536665 + AluJo SINE Alu 15 299 -13 950 119 6 25 chr10 30780208 30780367 -109536398 + AluJo SINE Alu 7 162 -150 2238 63 7 7 chr10 30781997 30782300 -109534465 + AluSg SINE Alu 3 305 -5 180 125 0 0 chr10 30783811 30783843 -109532922 + (CGGGG)n Simple_repeat Simple_repeat 3 34 0 24 32 0 0 chr10 30784231 30784262 -109532503 + GC_rich Low_complexity Low_complexity 1 31 0 251 341 0 0 chr10 30784897 30785064 -109531701 + (TG)n Simple_repeat Simple_repeat 2 168 0 2216 87 10 0 chr10 30790078 30790367 -109526398 + AluSg SINE Alu 1 292 -18 349 167 15 0 chr10 30790669 30790735 -109526030 - AluSg/x SINE Alu -26 274 208 1422 115 5 5 chr10 30790786 30790994 -109525771 - AluSq SINE Alu -105 208 1 280 259 36 98 chr10 30792364 30792476 -109524289 + MIR SINE MIR 79 183 -79 249 33 0 0 chr10 30793892 30793922 -109522843 + (TG)n Simple_repeat Simple_repeat 1 30 0 192 229 0 0 chr10 30794391 30794426 -109522339 + L2 LINE L2 3149 3183 -89 2144 102 3 0 chr10 30795185 30795480 -109521285 - AluSp SINE Alu -4 309 14 1286 155 68 8 chr10 30795557 30795808 -109520957 - AluJo SINE Alu -46 266 1 473 194 0 11 chr10 30795822 30795915 -109520850 - FLAM_C SINE Alu -18 125 34 27 62 0 0 chr10 30796037 30796085 -109520680 + AT_rich Low_complexity Low_complexity 1 48 0 1179 228 3 14 chr10 30796154 30796443 -109520322 - L1MA4 LINE L1 -11 6289 6004 1741 166 0 13 chr10 30797375 30797677 -109519088 - AluJb SINE Alu -14 298 1 1103 141 131 5 chr10 30797711 30797910 -109518855 + MSTA LTR MaLR 1 224 -204 240 163 0 0 chr10 30797914 30797957 -109518808 + C-rich Low_complexity Low_complexity 4 46 0 609 133 33 20 chr10 30797976 30798126 -109518639 + CT-rich Low_complexity Low_complexity 3 154 0 957 158 133 20 chr10 30798143 30798346 -109518419 + MSTA LTR MaLR 203 428 0 443 217 157 0 chr10 30798370 30798485 -109518280 + MIR SINE MIR 27 159 -103 958 142 6 24 chr10 30798490 30798659 -109518106 - FRAM SINE Alu 0 40 1 314 127 18 0 chr10 30798683 30798738 -109518027 + MIR SINE MIR 169 224 -38 2355 79 7 0 chr10 30798885 30799188 -109517577 + AluSx SINE Alu 1 305 -7 1716 161 0 3 chr10 30799649 30799935 -109516830 + AluJb SINE Alu 1 285 -27 2255 111 0 0 chr10 30800029 30800336 -109516429 + AluSx SINE Alu 1 307 -5 1830 149 13 20 chr10 30800430 30800732 -109516033 + AluJo SINE Alu 1 300 -12 2043 132 3 0 chr10 30801170 30801474 -109515291 - AluSx SINE Alu -3 309 5 1055 128 13 0 chr10 30801511 30801667 -109515098 - AluJb SINE Alu -25 287 130 21 36 0 0 chr10 30801913 30801941 -109514824 + AT_rich Low_complexity Low_complexity 1 28 0 1800 157 3 10 chr10 30802506 30802811 -109513954 + AluJo SINE Alu 9 311 -1 660 176 7 29 chr10 30802854 30802990 -109513775 - AluJb SINE Alu -178 134 2 2105 110 7 3 chr10 30803327 30803635 -109513130 - AluSp SINE Alu -4 309 1 2117 107 7 0 chr10 30803832 30804121 -109512644 - AluSx SINE Alu -18 294 4 1825 146 3 19 chr10 30805116 30805424 -109511341 - AluJo SINE Alu -9 303 1 926 127 0 0 chr10 30805485 30805619 -109511146 - AluSg/x SINE Alu -45 267 134 2080 121 7 0 chr10 30805619 30805916 -109510849 - AluSx SINE Alu -13 299 1 188 286 14 29 chr10 30806073 30806143 -109510622 + L3 LINE CR1 1404 1472 -105 1989 64 0 0 chr10 30806278 30806527 -109510238 - AluY SINE Alu -6 305 57 256 360 0 0 chr10 30806598 30806673 -109510092 + MER5C DNA MER1_type 9 83 -241 488 138 0 0 chr10 30806679 30806759 -109510006 - MADE1 DNA Mariner 0 80 1 1891 117 60 0 chr10 30806762 30807044 -109509721 - AluSx SINE Alu -13 299 1 386 82 0 0 chr10 30807044 30807093 -109509672 - MSTB LTR MaLR -372 54 6 1592 170 7 24 chr10 30807906 30808200 -109508565 - AluJo SINE Alu -18 294 6 2097 124 0 13 chr10 30808282 30808597 -109508168 - AluSx SINE Alu -1 311 1 2212 92 7 0 chr10 30808873 30809166 -109507599 - AluSc SINE Alu -14 295 1 1712 179 0 19 chr10 30809491 30809803 -109506962 - AluJo SINE Alu -6 306 1 1977 128 3 0 chr10 30809906 30810204 -109506561 + AluSq SINE Alu 1 299 -14 1646 171 0 7 chr10 30810383 30810682 -109506083 + AluJb SINE Alu 14 310 -2 279 343 97 6 chr10 30811396 30811571 -109505194 - MIR3 SINE MIR -6 202 12 * 908 223 66 0 chr10 30811544 30811741 -109505024 + MIR SINE MIR 53 262 0 2137 90 0 10 chr10 30812117 30812416 -109504349 - AluSx SINE Alu -16 296 1 944 180 0 27 chr10 30812615 30812798 -109503967 - FRAM SINE Alu -3 173 1 719 174 0 36 chr10 30812804 30812981 -109503784 - FLAM_C SINE Alu 0 172 1 2208 101 0 0 chr10 30813193 30813489 -109503276 - AluSx SINE Alu -16 296 1 33 56 0 0 chr10 30813489 30813543 -109503222 + AT_rich Low_complexity Low_complexity 1 54 0 1965 113 0 4 chr10 30813557 30813823 -109502942 - AluSg SINE Alu -45 265 1 39 0 0 20 chr10 30813823 30813859 -109502906 + AT_rich Low_complexity Low_complexity 1 37 -12 1930 155 0 7 chr10 30813859 30814150 -109502615 - AluJo SINE Alu -23 289 1 39 0 0 20 chr10 30814150 30814163 -109502602 + AT_rich Low_complexity Low_complexity 37 49 0 216 256 39 13 chr10 30814367 30814445 -109502320 + (TTGGGG)n Simple_repeat Simple_repeat 1 80 0 2447 71 7 7 chr10 30814745 30815054 -109501711 + AluSx SINE Alu 1 309 -3 183 333 0 0 chr10 30815065 30815116 -109501649 + L2 LINE L2 3210 3260 -12 207 0 0 0 chr10 30816210 30816233 -109500532 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 2013 121 25 0 chr10 30816233 30816514 -109500251 - AluSq SINE Alu -25 288 1 316 297 74 7 chr10 30816642 30816790 -109499975 - MIR3 SINE MIR -49 159 2 2204 100 0 0 chr10 30817862 30818141 -109498624 + AluSx SINE Alu 27 305 -7 402 177 13 0 chr10 30818217 30818296 -109498469 - AluJo SINE Alu -3 309 230 1021 185 45 6 chr10 30818297 30818475 -109498290 - AluJo SINE Alu -127 185 1 242 231 21 77 chr10 30818558 30818701 -109498064 - L1ME4a LINE L1 -21 6100 5966 245 97 0 0 chr10 30818751 30818782 -109497983 + MLT1A1 LTR MaLR 1 31 -334 678 174 0 72 chr10 30818782 30818920 -109497845 - FLAM_A SINE Alu -5 128 1 720 162 0 0 chr10 30818920 30819031 -109497734 - AluJo/FLAM SINE Alu -188 124 14 1775 173 21 27 chr10 30819039 30819374 -109497391 + MLT1A1 LTR MaLR 33 365 0 1739 172 3 20 chr10 30819384 30819686 -109497079 - AluJo SINE Alu -15 297 1 1117 116 0 0 chr10 30819913 30820059 -109496706 + AluSg SINE Alu 1 146 -164 1340 144 19 5 chr10 30820468 30820683 -109496082 - AluJb SINE Alu -8 304 87 1542 196 0 7 chr10 30822260 30822530 -109494235 - AluJb SINE Alu -20 292 25 1645 198 96 8 chr10 30823072 30823436 -109493329 + MSTD LTR MaLR 1 396 0 825 152 0 41 chr10 30823509 30823654 -109493111 - FLAM_C SINE Alu 0 143 5 225 91 45 45 chr10 30823968 30824012 -109492753 + MIR SINE MIR 111 154 -108 377 312 59 43 chr10 30824092 30824345 -109492420 + L2 LINE L2 2941 3197 -75 969 200 21 109 chr10 30824345 30824359 -109492406 - AluJo SINE Alu -1 301 287 927 109 0 0 chr10 30824359 30824497 -109492268 + (TTCC)n Simple_repeat Simple_repeat 3 140 0 969 200 21 109 chr10 30824497 30824812 -109491953 - AluJo SINE Alu -15 287 1 269 26 0 26 chr10 30824812 30824851 -109491914 + (TTTTA)n Simple_repeat Simple_repeat 5 42 0 2068 121 0 4 chr10 30824851 30825132 -109491633 - AluSx SINE Alu -32 280 1 1743 202 0 0 chr10 30825449 30825741 -109491024 + AluJb SINE Alu 6 297 -15 183 42 0 0 chr10 30825769 30825793 -109490972 + (TTG)n Simple_repeat Simple_repeat 1 24 0 524 273 82 6 chr10 30826293 30826476 -109490289 + MIR SINE MIR 15 211 -51 1347 121 9 78 chr10 30826509 30826705 -109490060 - AluJo SINE Alu -11 301 122 1969 105 0 14 chr10 30826705 30826982 -109489783 + AluSx SINE Alu 37 309 -3 1347 121 9 78 chr10 30826982 30827016 -109489749 - AluJo SINE Alu -190 122 87 261 264 28 0 chr10 30827030 30827102 -109489663 - MIR SINE MIR -2 260 187 2283 112 0 3 chr10 30829722 30830025 -109486740 + AluSg SINE Alu 1 302 -8 22 35 0 0 chr10 30830114 30830143 -109486622 + AT_rich Low_complexity Low_complexity 1 29 0 29 0 0 0 chr10 30830168 30830197 -109486568 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr10 30830678 30830705 -109486060 + AT_rich Low_complexity Low_complexity 1 27 0 361 195 51 13 chr10 30831651 30831766 -109484999 - MIR SINE MIR -62 146 35 234 128 0 0 chr10 30833092 30833131 -109483634 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 239 297 62 47 chr10 30833406 30833534 -109483231 + MIR SINE MIR 120 249 -13 1195 210 48 4 chr10 30833718 30833990 -109482775 - L1MC4a LINE L1 -1311 6497 6214 43 20 0 0 chr10 30834662 30834712 -109482053 + AT_rich Low_complexity Low_complexity 1 50 0 1006 188 84 17 chr10 30834788 30835086 -109481679 - L1M4 LINE L1 -2921 3225 2908 6613 63 59 0 chr10 30835087 30836267 -109480498 - L1PA7 LINE L1 -4 6150 4937 1919 178 54 11 chr10 30836545 30836916 -109479849 - MLT1B LTR MaLR 0 390 4 272 91 136 0 chr10 30837239 30837283 -109479482 - MADE1 DNA Mariner 0 80 31 2109 97 0 0 chr10 30837283 30837551 -109479214 + AluY SINE Alu 44 311 0 549 293 34 22 chr10 30837571 30837905 -109478860 - L1MC4a LINE L1 -157 5964 5630 234 0 0 0 chr10 30838715 30838741 -109478024 + (GA)n Simple_repeat Simple_repeat 1 26 0 291 140 0 0 chr10 30838934 30838984 -109477781 + (CA)n Simple_repeat Simple_repeat 1 50 0 523 299 81 9 chr10 30839129 30839343 -109477422 + MIR SINE MIR 13 245 -17 1692 117 0 0 chr10 30839343 30839574 -109477191 + AluSg/x SINE Alu 82 312 0 258 248 23 78 chr10 30839680 30839809 -109476956 - MLT1K LTR MaLR -40 548 427 28 0 0 0 chr10 30839882 30839910 -109476855 + AT_rich Low_complexity Low_complexity 1 28 0 580 162 111 8 chr10 30840343 30840460 -109476305 - FLAM_A SINE Alu -4 129 1 5218 176 15 8 chr10 30841168 30842934 -109473831 + L1PA16 LINE L1 4197 5970 -196 22 0 0 0 chr10 30842934 30842956 -109473809 + AT_rich Low_complexity Low_complexity 1 22 0 243 315 120 0 chr10 30844377 30844485 -109472280 - MIR SINE MIR -35 227 107 526 283 108 55 chr10 30845729 30846203 -109470562 + L2 LINE L2 2815 3313 0 2387 108 0 0 chr10 30846326 30846631 -109470134 - AluSc SINE Alu -4 305 1 1280 251 58 28 chr10 30846665 30847059 -109469706 + MLT1I LTR MaLR 2 407 -2 397 246 82 0 chr10 30847192 30847314 -109469451 - MIR SINE MIR -28 234 103 589 229 157 0 chr10 30847327 30847480 -109469285 + MER5A DNA MER1_type 13 189 0 254 224 0 17 chr10 30848467 30848525 -109468240 - L2 LINE L2 -2 3270 3214 364 277 84 24 chr10 30849437 30849603 -109467162 + L3 LINE CR1 736 911 -666 736 290 65 38 chr10 30849762 30849891 -109466874 - L1ME4a LINE L1 -93 6028 5904 1848 144 28 14 chr10 30849891 30850182 -109466583 - AluJb SINE Alu -17 295 1 736 290 65 38 chr10 30850182 30850683 -109466082 - L1ME4a LINE L1 -217 5904 5381 181 182 0 0 chr10 30851207 30851240 -109465525 + L2 LINE L2 3278 3310 -3 352 293 0 9 chr10 30851730 30851836 -109464929 + MER5A DNA MER1_type 43 147 -42 417 263 113 16 chr10 30852326 30852520 -109464245 + MIR SINE MIR 50 262 0 537 191 9 0 chr10 30854087 30854192 -109462573 + AluSg/x SINE Alu 205 310 0 334 286 96 28 chr10 30854298 30854476 -109462289 + MIR SINE MIR 8 197 -65 281 306 122 14 chr10 30854746 30854893 -109461872 + MIR SINE MIR 100 262 0 233 350 62 0 chr10 30854898 30854978 -109461787 - L2 LINE L2 -19 3253 3169 376 252 222 9 chr10 30855033 30855366 -109461399 + L1ME4a LINE L1 5718 6121 0 241 254 0 16 chr10 30855939 30856002 -109460763 + L1MC3 LINE L1 5525 5586 -2222 212 270 135 0 chr10 30856405 30856479 -109460286 + L2 LINE L2 3230 3313 0 640 253 0 30 chr10 30856928 30857094 -109459671 - MLT2A2 LTR ERVL 0 453 293 246 288 14 0 chr10 30857206 30857279 -109459486 + MIR SINE MIR 155 228 -34 1861 250 76 6 chr10 30858158 30858642 -109458123 + LTR33 LTR ERVL 2 519 -2 325 290 94 0 chr10 30858645 30858783 -109457982 + MIR3 SINE MIR 33 183 -25 404 348 62 4 chr10 30859050 30859277 -109457488 + MIR SINE MIR 1 240 -22 854 243 66 52 chr10 30859443 30859805 -109456960 + L1MC3 LINE L1 6047 6413 -1372 365 289 47 78 chr10 30859910 30860166 -109456599 - L1MEd LINE L1 -5010 1109 862 2313 248 104 12 chr10 30860248 30862925 -109453840 - L1MD3 LINE L1 -10 7985 4899 2366 103 0 0 chr10 30862925 30863227 -109453538 - AluSg SINE Alu -5 305 4 2313 248 104 12 chr10 30863227 30863414 -109453351 - L1MD3 LINE L1 -3096 4899 4730 417 291 60 87 chr10 30863747 30864149 -109452616 + MLT1J LTR MaLR 121 511 0 281 301 60 8 chr10 30864470 30864603 -109452162 - MER117 DNA MER1_type -50 147 8 477 285 53 87 chr10 30864852 30865231 -109451534 + MLT1J LTR MaLR 53 458 -53 224 118 0 0 chr10 30866048 30866082 -109450683 + MIR SINE MIR 116 149 -113 211 295 147 0 chr10 30866902 30867058 -109449707 - L2 LINE L2 -254 3059 2881 402 271 20 26 chr10 30867826 30867977 -109448788 + MLT1K LTR MaLR 412 561 -27 264 280 15 83 chr10 30868060 30868192 -109448573 - MIR SINE MIR -56 152 30 379 260 67 33 chr10 30868324 30868474 -109448291 + MIR3 SINE MIR 3 157 -51 517 129 0 59 chr10 30868975 30869076 -109447689 + AluSg/x SINE Alu 218 312 0 195 183 26 174 chr10 30869118 30869188 -109447577 - MIR SINE MIR -2 260 212 1905 164 7 0 chr10 30869188 30869493 -109447272 - AluJb SINE Alu -5 307 1 195 183 26 174 chr10 30869493 30869537 -109447228 - MIR SINE MIR -50 212 163 22 0 0 0 chr10 30870442 30870464 -109446301 + AT_rich Low_complexity Low_complexity 1 22 0 2287 84 3 3 chr10 30871941 30872254 -109444511 - AluSp SINE Alu 0 313 1 1801 174 3 19 chr10 30872274 30872591 -109444174 - AluJb SINE Alu 0 312 1 732 74 0 11 chr10 30873461 30873556 -109443209 - AluY SINE Alu -179 132 39 2236 128 0 0 chr10 30873578 30873876 -109442889 - AluSx SINE Alu -14 298 1 1663 177 30 7 chr10 30873903 30874202 -109442563 + AluJo SINE Alu 1 306 -6 2261 123 0 0 chr10 30875298 30875599 -109441166 - AluSx SINE Alu -11 301 1 1977 117 75 34 chr10 30875819 30876177 -109440588 + THE1C LTR MaLR 1 373 -2 210 269 268 0 chr10 30877142 30877236 -109439529 - MIR SINE MIR -75 133 47 1676 186 3 31 chr10 30877241 30877559 -109439206 + AluJo SINE Alu 1 309 -3 2238 106 27 0 chr10 30877568 30877869 -109438896 + AluSg SINE Alu 1 309 -1 2241 87 32 23 chr10 30878145 30878455 -109438310 + AluSq SINE Alu 1 313 0 187 0 88 29 chr10 30879146 30879180 -109437585 + CT-rich Low_complexity Low_complexity 5 40 0 2209 100 17 0 chr10 30879194 30879484 -109437281 - AluSx SINE Alu -17 295 1 257 0 30 0 chr10 30879499 30879532 -109437233 + (TTTTC)n Simple_repeat Simple_repeat 1 34 0 1057 122 6 6 chr10 30879547 30879727 -109437038 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2027 160 0 0 chr10 30879749 30880056 -109436709 - AluSx SINE Alu -5 307 1 1719 169 3 10 chr10 30880139 30880435 -109436330 - AluJb SINE Alu -18 294 1 1131 257 78 50 chr10 30880469 30881221 -109435544 - L2 LINE L2 0 3313 2535 2387 95 0 3 chr10 30881221 30881525 -109435240 - AluSx SINE Alu -9 303 1 1131 257 78 50 chr10 30881525 30881602 -109435163 - L2 LINE L2 -778 2535 2462 992 28 14 14 chr10 30881789 30881931 -109434834 + (TCTA)n Simple_repeat Simple_repeat 3 144 0 229 152 13 101 chr10 30882197 30882276 -109434489 - L1P LINE L1 -3098 3048 2977 354 323 83 6 chr10 30882726 30882911 -109433854 - MIR SINE MIR -54 154 1 2257 103 17 0 chr10 30882925 30883226 -109433539 - AluSq SINE Alu -7 306 1 509 222 28 0 chr10 30883490 30883598 -109433167 - MIR SINE MIR -146 116 6 1763 146 0 32 chr10 30883850 30884154 -109432611 + AluJo SINE Alu 12 306 0 971 142 26 7 chr10 30884549 30884704 -109432061 - LTR26E LTR ERV1 0 622 465 211 150 33 0 chr10 30884734 30884794 -109431971 + (TA)n Simple_repeat Simple_repeat 1 62 0 682 144 9 9 chr10 30884841 30884952 -109431813 - AluJo SINE Alu -117 195 85 2285 129 10 50 chr10 30884952 30885354 -109431411 - LTR26B LTR ERV1 -145 386 1 2993 132 16 0 chr10 30885490 30885931 -109430834 + MER83 LTR ERV1 1 448 0 981 193 0 0 chr10 30886084 30886260 -109430505 + FRAM SINE Alu 1 174 -2 858 278 93 10 chr10 30886555 30886857 -109429908 + LTR33A LTR ERVL 1 327 -196 492 206 0 0 chr10 30886895 30886987 -109429778 + LTR33A LTR ERVL 419 510 -13 180 305 211 33 chr10 30887178 30887755 -109429010 - L2 LINE L2 -674 2640 1961 2961 112 7 2 chr10 30887756 30888186 -109428579 + MER57B LTR ERV1 3 434 0 796 151 7 7 chr10 30888623 30888775 -109427990 + CT-rich Low_complexity Low_complexity 3 154 0 2267 100 7 0 chr10 30888777 30889077 -109427688 - AluSx SINE Alu -2 310 9 310 208 25 138 chr10 30889664 30889823 -109426942 - MER5B DNA MER1_type -4 174 34 5180 151 49 36 chr10 30889882 30890506 -109426259 + L1MA9 LINE L1 5160 5774 -538 2111 126 3 0 chr10 30890506 30890815 -109425950 - AluSx SINE Alu 0 310 1 5180 151 49 36 chr10 30890815 30891167 -109425598 + L1MA9 LINE L1 5774 6120 -192 387 0 0 0 chr10 30891167 30891210 -109425555 + (CA)n Simple_repeat Simple_repeat 1 43 0 5180 151 49 36 chr10 30891210 30891330 -109425435 + L1MA9 LINE L1 6120 6270 -42 1510 210 28 3 chr10 30891330 30891616 -109425149 - AluJo SINE Alu -11 301 9 5180 151 49 36 chr10 30891616 30891646 -109425119 + L1MA9 LINE L1 6270 6298 -14 749 112 28 98 chr10 30891720 30891863 -109424902 - FLAM_C SINE Alu 0 133 1 334 259 62 0 chr10 30892719 30892800 -109423965 - L2 LINE L2 -2 3311 3226 2574 170 70 20 chr10 30892843 30893397 -109423368 + MER34C LTR ERV1 1 582 -3 423 275 46 51 chr10 30893500 30893705 -109423060 - L2 LINE L2 -234 3079 2875 2839 143 53 42 chr10 30893705 30894230 -109422535 - LTR26B LTR ERV1 0 531 1 423 275 46 51 chr10 30894230 30894309 -109422456 - L2 LINE L2 -438 2875 2797 1991 229 45 46 chr10 30894330 30894900 -109421865 + MER77 LTR ERV1 54 601 -4 318 245 11 43 chr10 30894937 30895031 -109421734 - L2 LINE L2 -513 2801 2711 199 54 54 0 chr10 30895031 30895068 -109421697 + (TA)n Simple_repeat Simple_repeat 2 40 0 30498 92 7 21 chr10 30895068 30895540 -109421225 - L1PA7 LINE L1 -6 6463 5986 2335 88 0 3 chr10 30895540 30895835 -109420930 - AluSc SINE Alu -13 296 3 30498 92 7 21 chr10 30895835 30899365 -109417400 - L1PA7 LINE L1 -483 5986 2557 2369 95 0 0 chr10 30899365 30899659 -109417106 - AluSq SINE Alu -19 294 1 30498 92 7 21 chr10 30899659 30901036 -109415729 - L1PA7 LINE L1 -3912 2557 1162 659 124 0 0 chr10 30901034 30901123 -109415642 - L1PA7 LINE L1 -6365 96 8 * 1888 142 7 33 chr10 30901134 30901436 -109415329 - AluJo SINE Alu -18 294 1 638 287 102 20 chr10 30901436 30901788 -109414977 - L2 LINE L2 -600 2714 2334 828 167 8 0 chr10 30901817 30901949 -109414816 - FLAM_C SINE Alu 0 133 1 257 94 0 0 chr10 30902051 30902104 -109414661 - LTR66 LTR ERVL -163 447 395 1193 157 4 68 chr10 30902593 30902828 -109413937 - AluJb SINE Alu -8 304 85 809 176 0 0 chr10 30902907 30903032 -109413733 - FLAM_A SINE Alu -8 125 1 63 44 0 0 chr10 30904158 30904249 -109412516 + AT_rich Low_complexity Low_complexity 1 91 0 283 137 32 65 chr10 30904257 30904381 -109412384 + (TTATA)n Simple_repeat Simple_repeat 2 121 0 2126 114 0 0 chr10 30904833 30905113 -109411652 - AluSg SINE Alu -30 280 1 2121 122 3 3 chr10 30906214 30906509 -109410256 - AluSx SINE Alu -17 295 1 22 0 0 0 chr10 30906825 30906847 -109409918 + AT_rich Low_complexity Low_complexity 1 22 0 281 226 73 48 chr10 30906848 30906972 -109409793 - L1MC5 LINE L1 -36 7925 7799 784 260 91 21 chr10 30907084 30907369 -109409396 + L1ME LINE L1 5260 5564 -600 1817 179 3 3 chr10 30907369 30907670 -109409095 + AluJb SINE Alu 1 301 -11 2210 122 3 0 chr10 30907750 30908054 -109408711 + AluSq SINE Alu 1 305 -8 2165 119 0 0 chr10 30908144 30908437 -109408328 + AluSx SINE Alu 16 308 -4 1830 209 61 2 chr10 30908767 30909160 -109407605 - MER90 LTR ERV1 -20 594 179 742 98 49 0 chr10 30909158 30909260 -109407505 - U6 snRNA snRNA 0 107 1 * 1045 210 5 10 chr10 30909258 30909463 -109407302 - MER90 LTR ERV1 -410 204 1 904 268 74 43 chr10 30909506 30909857 -109406908 - MLT1J LTR MaLR -7 504 143 256 311 33 25 chr10 30912768 30912890 -109403875 - MIR3 SINE MIR -32 176 54 25 31 0 0 chr10 30912957 30912989 -109403776 + AT_rich Low_complexity Low_complexity 1 32 0 2157 135 3 0 chr10 30912989 30913292 -109403473 + AluSx SINE Alu 1 304 -8 1169 178 5 0 chr10 30913417 30913608 -109403157 + AluJb SINE Alu 89 280 -32 1688 180 34 17 chr10 30914646 30915002 -109401763 - MLT1A1 LTR MaLR -3 362 1 2213 122 0 0 chr10 30915093 30915388 -109401377 - AluY SINE Alu -16 295 1 2043 83 0 24 chr10 30918245 30918571 -109398194 - AluY SINE Alu 0 319 1 1564 185 17 3 chr10 30918574 30918866 -109397899 - AluJo SINE Alu -16 296 1 2384 86 0 9 chr10 30919036 30919351 -109397414 - AluSq SINE Alu -1 312 1 189 0 0 0 chr10 30919562 30919583 -109397182 + (TCTCCC)n Simple_repeat Simple_repeat 5 25 0 9183 60 10 110 chr10 30919600 30921138 -109395627 + SVA Other Other 2 1385 -1 22 0 0 0 chr10 30921138 30921160 -109395605 + AT_rich Low_complexity Low_complexity 1 22 0 804 160 0 8 chr10 30921607 30921732 -109395033 + FLAM_C SINE Alu 1 124 -9 2679 96 14 14 chr10 30921751 30922115 -109394650 + THE1B LTR MaLR 1 364 0 890 173 23 12 chr10 30922115 30922288 -109394477 + FRAM SINE Alu 2 176 0 1903 141 138 23 chr10 30923224 30923608 -109393157 + MSTA LTR MaLR 1 428 0 469 253 81 81 chr10 30923647 30923868 -109392897 + HAL1 LINE L1 863 1083 -1424 635 107 0 0 chr10 30923870 30923954 -109392811 - AluJ SINE Alu -21 291 208 821 132 0 96 chr10 30923955 30924003 -109392762 - AluJ SINE Alu -161 151 100 2304 150 68 5 chr10 30924003 30924402 -109392363 - MSTA LTR MaLR 0 428 5 821 132 0 96 chr10 30924402 30924520 -109392245 - AluJ SINE Alu -212 100 1 874 178 0 0 chr10 30924521 30924671 -109392094 - MER5A DNA MER1_type -36 153 4 645 332 0 23 chr10 30924687 30924904 -109391861 + MIR SINE MIR 51 262 0 1416 148 65 7 chr10 30925085 30925362 -109391403 + AluJb SINE Alu 3 295 -17 1610 179 10 14 chr10 30925904 30926201 -109390564 + AluJb SINE Alu 1 296 -16 1054 159 0 0 chr10 30926716 30926886 -109389879 - FRAM SINE Alu -5 171 2 261 83 0 0 chr10 30927954 30927990 -109388775 + (CA)n Simple_repeat Simple_repeat 2 37 0 235 216 21 72 chr10 30928010 30928107 -109388658 - L1MC4 LINE L1 -1337 6705 6614 2324 168 0 57 chr10 30928116 30928186 -109388579 - Tigger2a DNA MER2_type -2274 434 362 1905 126 0 23 chr10 30928186 30928487 -109388278 - AluSx SINE Alu -18 294 1 2217 91 0 0 chr10 30928497 30928793 -109387972 - AluSq SINE Alu -16 297 2 2324 168 0 57 chr10 30928793 30929170 -109387595 - Tigger2a DNA MER2_type -2355 353 2 1995 92 8 0 chr10 30929344 30929604 -109387161 - MLT2A2 LTR ERVL -191 262 1 1445 196 112 16 chr10 30929604 30929915 -109386850 - MLT1D LTR MaLR -163 342 2 428 68 17 0 chr10 30929952 30930011 -109386754 + MADE1 DNA Mariner 3 62 -18 365 113 0 0 chr10 30930009 30930062 -109386703 + MADE1 DNA Mariner 28 80 0 * 1574 163 3 34 chr10 30930194 30930488 -109386277 + AluJo SINE Alu 1 285 -27 1578 187 0 16 chr10 30930583 30930888 -109385877 - AluJo SINE Alu -12 300 1 208 333 71 0 chr10 30931306 30931390 -109385375 - MIR3 SINE MIR -11 197 108 362 158 53 26 chr10 30932028 30932104 -109384661 - MER58 DNA MER1_type -1 2419 2342 1692 158 3 7 chr10 30932120 30932411 -109384354 - AluJo SINE Alu -22 290 1 1431 41 0 0 chr10 30932438 30932608 -109384157 - AluY SINE Alu -18 293 124 394 141 295 0 chr10 30932620 30932698 -109384067 - MER58 DNA MER1_type -109 106 6 511 238 9 103 chr10 30932708 30932922 -109383843 - L2 LINE L2 -555 2759 2566 531 297 83 21 chr10 30934416 30934608 -109382157 - MIR SINE MIR -5 257 54 482 218 59 0 chr10 30934886 30934987 -109381778 - ORSL DNA AcHobo 0 275 169 403 335 18 36 chr10 30935297 30935464 -109381301 - MIR3 SINE MIR -24 184 21 29 47 0 0 chr10 30935816 30935859 -109380906 + AT_rich Low_complexity Low_complexity 1 43 0 3128 157 34 12 chr10 30935880 30936162 -109380603 - L1PA16 LINE L1 -9 6157 5883 1656 151 11 4 chr10 30936162 30936461 -109380304 + AluJb SINE Alu 3 303 0 3128 157 34 12 chr10 30936461 30936737 -109380028 - L1PA16 LINE L1 -283 5883 5586 553 229 8 0 chr10 30938345 30938463 -109378302 + MER94 DNA DNA 15 133 -1 24 0 0 0 chr10 30941347 30941371 -109375394 + AT_rich Low_complexity Low_complexity 1 24 0 423 265 124 80 chr10 30941449 30941876 -109374889 - L1ME4a LINE L1 -77 6044 5599 2157 188 8 48 chr10 30942015 30942458 -109374307 + MLT2B3 LTR ERVL 1 374 -146 1190 187 20 138 chr10 30942487 30942648 -109374117 + AluYb8 SINE Alu 1 101 -207 2096 114 3 0 chr10 30942648 30942938 -109373827 - AluSx SINE Alu -21 291 1 1190 187 20 138 chr10 30942938 30943124 -109373641 + AluYb8 SINE Alu 101 307 -1 181 365 144 19 chr10 30943242 30943450 -109373315 + L2 LINE L2 2381 2614 -700 894 123 0 36 chr10 30943717 30943855 -109372910 + FLAM_C SINE Alu 1 133 0 1142 176 22 36 chr10 30943892 30944114 -109372651 - MER20 DNA MER1_type 0 219 1 185 296 123 0 chr10 30944120 30944201 -109372564 + L2 LINE L2 2767 2857 -457 700 256 59 29 chr10 30944421 30944694 -109372071 - MLT1J1 LTR MaLR -165 281 1 22 0 0 0 chr10 30944929 30944951 -109371814 + AT_rich Low_complexity Low_complexity 1 22 0 2283 93 7 0 chr10 30945294 30945604 -109371161 + AluSx SINE Alu 1 312 0 323 270 0 0 chr10 30945720 30945794 -109370971 + AluJ/FLAM SINE Alu 1 74 -228 617 165 0 0 chr10 30945796 30945893 -109370872 + AluJb SINE Alu 190 286 -26 279 0 0 0 chr10 30945896 30945927 -109370838 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1475 192 0 35 chr10 30946034 30946347 -109370418 + AluJo SINE Alu 1 302 -10 1491 153 102 4 chr10 30947496 30947770 -109368995 + AluJo SINE Alu 3 303 -9 2226 86 0 0 chr10 30947791 30948081 -109368684 + AluSx SINE Alu 1 290 -22 292 197 13 40 chr10 30949544 30949620 -109367145 + (CATATA)n Simple_repeat Simple_repeat 3 76 0 1639 163 14 17 chr10 30949651 30949945 -109366820 - AluJo SINE Alu -19 293 1 362 238 0 0 chr10 30949977 30950057 -109366708 + MIR3 SINE MIR 82 161 -47 195 388 0 0 chr10 30950409 30950494 -109366271 + L3 LINE CR1 400 484 -1093 1567 147 4 47 chr10 30950910 30951189 -109365576 + AluJo SINE Alu 1 267 -45 1680 204 70 103 chr10 30951505 30952138 -109364627 + LTR9 LTR ERV1 1 612 0 28 29 0 0 chr10 30952410 30952445 -109364320 + AT_rich Low_complexity Low_complexity 1 35 0 2354 55 0 3 chr10 30952604 30952896 -109363869 - AluY SINE Alu 0 311 21 1866 140 7 0 chr10 30952925 30953225 -109363540 + AluSx SINE Alu 3 304 -8 1684 139 76 0 chr10 30953864 30954152 -109362613 - L1MA2 LINE L1 -4 6300 5991 876 133 0 15 chr10 30954152 30954287 -109362478 - AluJo/FRAM SINE Alu -46 266 134 1543 148 6 88 chr10 30954288 30954619 -109362146 - AluSg SINE Alu -6 304 1 423 0 0 0 chr10 30954991 30955038 -109361727 + (CA)n Simple_repeat Simple_repeat 2 48 0 274 83 0 0 chr10 30957106 30957142 -109359623 - L2 LINE L2 -6 3307 3272 423 304 7 0 chr10 30957913 30958061 -109358704 + L1ME4a LINE L1 5971 6119 -2 1996 122 0 3 chr10 30959967 30960263 -109356502 - AluSx SINE Alu -17 295 1 4128 139 19 2 chr10 30960282 30960906 -109355859 + MER41B LTR ERV1 1 635 0 202 298 43 0 chr10 30960912 30960959 -109355806 + L2 LINE L2 3262 3310 -3 754 196 74 12 chr10 30961027 30961190 -109355575 + FRAM SINE Alu 4 176 0 421 154 22 0 chr10 30961228 30961319 -109355446 + GA-rich Low_complexity Low_complexity 3 95 0 249 274 14 60 chr10 30961992 30962125 -109354640 + L1MC4a LINE L1 4489 4610 -1536 2150 179 18 18 chr10 30962125 30962521 -109354244 - MSTD LTR MaLR 0 396 1 249 274 14 60 chr10 30962521 30962602 -109354163 + L1MC4a LINE L1 4610 4693 -1453 1560 171 20 43 chr10 30962603 30962907 -109353858 - AluJo SINE Alu -15 297 1 2026 120 3 0 chr10 30962966 30963257 -109353508 + AluSg SINE Alu 1 292 -18 305 294 28 28 chr10 30963303 30963412 -109353353 + L1MC4a LINE L1 5217 5325 -821 2299 109 3 0 chr10 30963491 30963813 -109352952 - pTR5 LTR ERV1 -2041 397 75 297 198 55 63 chr10 30963813 30963946 -109352819 - LTR30 LTR ERV1 -94 606 375 3258 165 61 32 chr10 30963946 30964707 -109352058 - pTR5 LTR ERV1 -439 1999 6 515 261 79 62 chr10 30964772 30965063 -109351702 + L1MC4a LINE L1 5530 5825 -1983 1929 112 54 3 chr10 30965068 30965363 -109351402 + AluSx SINE Alu 1 310 -2 1359 116 98 5 chr10 30965435 30965659 -109351106 + AluSx SINE Alu 60 304 -8 214 162 0 0 chr10 30965787 30965824 -109350941 + (TG)n Simple_repeat Simple_repeat 1 37 0 233 233 17 0 chr10 30966148 30966208 -109350557 + L1 LINE L1 5221 5281 -865 2314 54 40 0 chr10 30966436 30966733 -109350032 - AluY SINE Alu -2 309 1 2635 96 53 50 chr10 30967730 30967882 -109348883 - LTR56 LTR ERV1 0 445 295 2292 83 21 3 chr10 30967882 30968172 -109348593 + AluSc SINE Alu 1 295 -14 2635 96 53 50 chr10 30968172 30968456 -109348309 - LTR56 LTR ERV1 -150 295 8 30 59 0 0 chr10 30968922 30968973 -109347792 + AT_rich Low_complexity Low_complexity 1 51 0 22 35 0 0 chr10 30968985 30969014 -109347751 + AT_rich Low_complexity Low_complexity 1 29 0 1513 166 0 4 chr10 30969096 30969343 -109347422 - AluJo SINE Alu -9 303 58 1177 166 19 9 chr10 30969376 30969587 -109347178 - L1PA16 LINE L1 -12 6154 5942 1847 159 0 30 chr10 30970014 30970310 -109346455 + AluJo SINE Alu 1 287 -25 408 20 0 0 chr10 30970310 30970359 -109346406 + (CATA)n Simple_repeat Simple_repeat 2 50 0 255 191 0 0 chr10 30971740 30971803 -109344962 + CT-rich Low_complexity Low_complexity 2 64 0 184 193 0 70 chr10 30972380 30972437 -109344328 - L2 LINE L2 0 3313 3261 243 253 242 22 chr10 30972558 30972740 -109344025 + L1ME3A LINE L1 2400 2621 -3525 183 222 0 0 chr10 30972766 30972811 -109343954 + (TATG)n Simple_repeat Simple_repeat 3 47 0 318 299 13 0 chr10 30972880 30972957 -109343808 - MER2 DNA MER2_type 0 345 268 204 170 21 21 chr10 30972966 30973013 -109343752 + A-rich Low_complexity Low_complexity 4 50 0 1258 129 5 15 chr10 30973032 30973233 -109343532 - MER2 DNA MER2_type -134 211 13 1037 295 144 18 chr10 30973281 30973366 -109343399 + L1ME3A LINE L1 2797 2870 -3276 2557 68 0 0 chr10 30973366 30973674 -109343091 + AluSq SINE Alu 1 308 -5 1037 295 144 18 chr10 30973674 30974844 -109341921 + L1ME3A LINE L1 2870 4256 -1890 433 254 146 84 chr10 30974871 30975163 -109341602 - LTR33 LTR ERVL 0 521 249 396 0 0 0 chr10 30975163 30975207 -109341558 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1838 131 0 7 chr10 30975216 30975491 -109341274 - AluSx SINE Alu -39 273 1 2278 117 0 0 chr10 30975497 30975804 -109340961 - AluSx SINE Alu -5 307 1 433 254 146 84 chr10 30975804 30975979 -109340786 - LTR33 LTR ERVL -283 238 7 1010 248 65 98 chr10 30975982 30976210 -109340555 + L1ME3A LINE L1 4420 4654 -1492 2044 111 50 0 chr10 30976210 30976490 -109340275 - AluSx SINE Alu -10 302 9 1010 248 65 98 chr10 30976490 30977158 -109339607 + L1ME3A LINE L1 4654 5275 -871 1009 274 53 12 chr10 30977234 30977573 -109339192 + L1ME3A LINE L1 5276 5628 -534 342 135 0 0 chr10 30977573 30977625 -109339140 + MER116 DNA Mariner 29 80 0 384 265 89 56 chr10 30977626 30977948 -109338817 + L1ME3A LINE L1 5641 5975 -195 2028 128 3 26 chr10 30978237 30978543 -109338222 + AluSx SINE Alu 1 299 -13 219 133 133 83 chr10 30978726 30978786 -109337979 + L2 LINE L2 3246 3308 -5 242 284 59 10 chr10 30978795 30978897 -109337868 + L1ME LINE L1 5373 5479 -2329 271 247 0 52 chr10 30979114 30979191 -109337574 + L1ME LINE L1 5746 5818 -303 2356 81 0 13 chr10 30979258 30979565 -109337200 - AluY SINE Alu -8 303 1 2058 130 0 7 chr10 30980286 30980585 -109336180 - AluSx SINE Alu -15 297 1 1761 130 0 11 chr10 30981170 30981432 -109335333 + AluJb SINE Alu 40 298 -14 1680 100 0 9 chr10 30981589 30981818 -109334947 - AluSc SINE Alu 0 309 83 40 0 0 0 chr10 30982596 30982636 -109334129 + AT_rich Low_complexity Low_complexity 1 40 0 1803 159 40 10 chr10 30983234 30983412 -109333353 - AluJo SINE Alu -1 311 119 195 42 0 0 chr10 30983412 30983436 -109333329 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1803 159 40 10 chr10 30983436 30983559 -109333206 - AluJo SINE Alu -193 119 1 536 198 0 37 chr10 30984661 30985033 -109331732 + CT-rich Low_complexity Low_complexity 1 180 0 292 229 0 0 chr10 30985033 30985094 -109331671 - AluJo SINE Alu 0 673 241 1417 154 13 21 chr10 30985207 30985440 -109331325 - AluJo SINE Alu -81 231 1 1667 188 4 0 chr10 30985872 30986149 -109330616 + AluJb SINE Alu 3 280 -32 741 162 31 12 chr10 30986149 30986391 -109330374 + GA-rich Low_complexity Low_complexity 1 246 0 1579 139 34 19 chr10 30986910 30987176 -109329589 + L1MA6 LINE L1 6031 6300 0 1611 185 7 7 chr10 30987292 30987568 -109329197 - AluJo SINE Alu -36 276 1 279 0 0 0 chr10 30988089 30988120 -109328645 + (A)n Simple_repeat Simple_repeat 1 31 0 1561 132 64 39 chr10 30988821 30989101 -109327664 - AluJo SINE Alu -15 297 11 898 294 23 0 chr10 30990351 30990616 -109326149 + AluJo SINE Alu 11 281 -31 21 36 0 0 chr10 30990660 30990688 -109326077 + AT_rich Low_complexity Low_complexity 1 28 0 366 250 23 0 chr10 30991331 30991419 -109325346 + L1MC4 LINE L1 6614 6703 -1339 243 88 0 0 chr10 30991424 30991458 -109325307 + (TA)n Simple_repeat Simple_repeat 1 34 0 2200 112 0 3 chr10 30991458 30991754 -109325011 - AluSx SINE Alu -17 295 1 325 276 113 116 chr10 30992378 30992758 -109324007 - L2 LINE L2 -131 3182 2804 1811 271 34 20 chr10 30992822 30993375 -109323390 - L2 LINE L2 -645 2669 2109 954 294 118 47 chr10 30993379 30993627 -109323138 - L2 LINE L2 -2477 837 608 3719 158 29 2 chr10 30993627 30994214 -109322551 - LTR26 LTR ERV1 0 603 1 954 294 118 47 chr10 30994214 30994359 -109322406 - L2 LINE L2 -2706 608 475 2327 101 0 0 chr10 30994359 30994657 -109322108 + AluSc SINE Alu 1 298 -11 954 294 118 47 chr10 30994657 30994898 -109321867 - L2 LINE L2 -2839 475 157 876 181 28 16 chr10 30995590 30995772 -109320993 - AluJo SINE Alu -11 301 118 262 128 0 0 chr10 30995786 30995825 -109320940 - MER65B LTR ERV1 -492 39 1 401 200 36 27 chr10 30995928 30996038 -109320727 + L2 LINE L2 2435 2545 -769 983 136 0 0 chr10 30996044 30996184 -109320581 + FRAM SINE Alu 1 140 -36 584 167 0 0 chr10 30996184 30996274 -109320491 - AluJ/FLAM SINE Alu -221 91 2 1010 333 94 7 chr10 30996275 30996830 -109319935 + HERV16 LTR ERVL 151 753 -4243 513 277 99 0 chr10 30996969 30997110 -109319655 + HERV16 LTR ERVL 910 1064 -3932 429 257 71 0 chr10 30997159 30997272 -109319493 + HERV16 LTR ERVL 1150 1270 -3726 2077 143 3 0 chr10 30997425 30997719 -109319046 + AluSx SINE Alu 1 295 -17 852 279 66 4 chr10 30997733 30997977 -109318788 + HERV16 LTR ERVL 1686 1944 -3052 700 309 115 26 chr10 30998002 30998471 -109318294 + LTR16B LTR ERVL 8 462 -2 1681 145 11 21 chr10 30999780 31000063 -109316702 + AluJb SINE Alu 18 297 -15 453 316 46 6 chr10 31000255 31000429 -109316336 + AluJo SINE Alu 91 271 -41 2050 138 0 3 chr10 31001036 31001347 -109315418 - AluJo SINE Alu -2 310 1 376 249 33 84 chr10 31001798 31002011 -109314754 - L2 LINE L2 -5 3308 3107 373 229 108 90 chr10 31002069 31002188 -109314577 - L1ME4a LINE L1 -295 5826 5711 399 41 0 0 chr10 31002188 31002237 -109314528 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 373 229 108 90 chr10 31002237 31002258 -109314507 - L1ME4a LINE L1 -410 5711 5692 2072 109 22 0 chr10 31002258 31002533 -109314232 - AluSx SINE Alu -22 290 10 308 64 21 0 chr10 31002540 31002587 -109314178 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 373 229 108 90 chr10 31002587 31002660 -109314105 - L1ME4a LINE L1 -434 5687 5600 1598 150 31 69 chr10 31002674 31002994 -109313771 - AluJb SINE Alu -4 308 1 373 231 0 0 chr10 31003426 31003504 -109313261 + MER116 DNA Mariner 2 79 -1 1326 105 6 11 chr10 31003740 31003921 -109312844 + L1PB1 LINE L1 5972 6151 0 232 121 0 0 chr10 31003961 31003994 -109312771 + LTR54 LTR ERV1 407 439 -71 2324 105 0 0 chr10 31004011 31004307 -109312458 - AluSq SINE Alu -17 296 1 270 267 99 30 chr10 31004640 31004741 -109312024 - MLT1L LTR MaLR -137 478 371 2228 116 7 0 chr10 31004840 31005150 -109311615 + AluSx SINE Alu 1 312 0 318 290 19 37 chr10 31005173 31005335 -109311430 - MLT1L LTR MaLR -435 180 22 1267 62 0 19 chr10 31006335 31006525 -109310240 - AluSp SINE Alu 0 315 129 1858 133 0 14 chr10 31006564 31006850 -109309915 + AluJb SINE Alu 1 282 -30 471 78 0 0 chr10 31006851 31006915 -109309850 + (AAATG)n Simple_repeat Simple_repeat 2 65 0 1675 177 23 48 chr10 31007643 31007953 -109308812 + AluJo SINE Alu 1 302 -10 665 303 82 22 chr10 31008504 31008871 -109307894 + L1ME LINE L1 5391 5779 -342 25 0 0 0 chr10 31008889 31008914 -109307851 + AT_rich Low_complexity Low_complexity 1 25 0 723 285 51 5 chr10 31009011 31009225 -109307540 + MIR SINE MIR 26 249 -13 198 0 0 0 chr10 31009618 31009640 -109307125 + (TA)n Simple_repeat Simple_repeat 2 23 0 1683 284 156 7 chr10 31009658 31009933 -109306832 - HAL1 LINE L1 -1643 864 631 1703 132 55 14 chr10 31009933 31010222 -109306543 - AluJo SINE Alu -7 305 5 1683 284 156 7 chr10 31010222 31010697 -109306068 - HAL1 LINE L1 -1876 631 2 318 326 7 29 chr10 31011163 31011301 -109305464 - MIR3 SINE MIR -28 180 46 1854 129 0 24 chr10 31011582 31011869 -109304896 + AluSp SINE Alu 3 282 -31 384 257 134 0 chr10 31012253 31012424 -109304341 - HAL1 LINE L1 -1646 861 668 1233 299 122 9 chr10 31012459 31012525 -109304240 - HAL1 LINE L1 -1903 604 547 1719 128 55 14 chr10 31012525 31012814 -109303951 - AluJo SINE Alu -7 305 5 1233 299 122 9 chr10 31012814 31013289 -109303476 - HAL1 LINE L1 -1960 547 2 337 303 7 70 chr10 31013755 31013897 -109302868 - MIR3 SINE MIR -28 180 48 2254 86 0 26 chr10 31014174 31014477 -109302288 + AluSp SINE Alu 3 297 -16 2211 138 33 30 chr10 31014946 31015308 -109301457 - THE1B LTR MaLR 0 364 2 2287 100 10 0 chr10 31016008 31016309 -109300456 - AluSx SINE Alu -8 304 1 816 219 44 11 chr10 31016467 31016650 -109300115 + MER5A DNA MER1_type 1 189 0 249 353 49 38 chr10 31017251 31017435 -109299330 + MER5A DNA MER1_type 3 188 -1 305 372 19 29 chr10 31017519 31017710 -109299055 + MIR SINE MIR 19 207 -55 313 235 10 10 chr10 31017848 31017950 -109298815 + GA-rich Low_complexity Low_complexity 3 104 0 2347 103 3 0 chr10 31017975 31018285 -109298480 + AluSx SINE Alu 1 311 -1 185 313 0 0 chr10 31018295 31018359 -109298406 - MIR SINE MIR -67 195 132 1947 111 0 86 chr10 31018606 31018930 -109297835 - AluSq SINE Alu -17 296 1 1315 81 0 0 chr10 31019887 31020061 -109296704 + L1MA1 LINE L1 6129 6302 0 916 130 0 0 chr10 31020341 31020464 -109296301 - FRAM SINE Alu -24 152 30 213 121 0 0 chr10 31020795 31020828 -109295937 + (TG)n Simple_repeat Simple_repeat 2 34 0 456 296 74 40 chr10 31020926 31021223 -109295542 + L2 LINE L2 3005 3311 -2 22 56 0 0 chr10 31021362 31021398 -109295367 + AT_rich Low_complexity Low_complexity 1 36 0 2171 113 3 0 chr10 31021756 31022040 -109294725 - AluSg SINE Alu -17 293 9 2313 108 36 28 chr10 31023716 31024077 -109292688 - THE1B LTR MaLR 0 364 1 1781 175 0 16 chr10 31024489 31024792 -109291973 + AluJo SINE Alu 1 298 -14 26 30 0 0 chr10 31024795 31024828 -109291937 + AT_rich Low_complexity Low_complexity 1 33 0 213 265 0 0 chr10 31026473 31026522 -109290243 + (CAGCC)n Simple_repeat Simple_repeat 5 53 0 1192 65 75 98 chr10 31027767 31027867 -109288898 + MSTC LTR MaLR 1 102 -326 2279 117 7 0 chr10 31027867 31028174 -109288591 + AluSx SINE Alu 1 309 -3 1192 65 75 98 chr10 31028174 31028287 -109288478 + MSTC LTR MaLR 102 209 -219 2131 125 0 16 chr10 31028287 31028590 -109288175 + AluSx SINE Alu 1 298 -14 313 277 32 0 chr10 31028609 31028703 -109288062 + MER5B DNA MER1_type 80 176 -2 260 244 0 56 chr10 31028737 31028827 -109287938 - MER5A DNA MER1_type -80 109 25 195 274 55 50 chr10 31028906 31028994 -109287771 + MER5A DNA MER1_type 39 135 -54 * 211 230 34 142 chr10 31028983 31029131 -109287634 - MER5B DNA MER1_type -30 148 17 2052 118 66 41 chr10 31029153 31029519 -109287246 - THE1C LTR MaLR 0 375 1 549 310 0 0 chr10 31029519 31029693 -109287072 - MER5B DNA MER1_type -4 174 1 2202 120 0 0 chr10 31030247 31030538 -109286227 - AluSc SINE Alu -18 291 1 240 220 0 0 chr10 31030898 31030948 -109285817 + MLT1K LTR MaLR 524 573 -15 396 269 141 6 chr10 31031766 31031922 -109284843 + MIR3 SINE MIR 19 195 -13 186 43 0 0 chr10 31032252 31032275 -109284490 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 240 279 97 11 chr10 31032286 31032390 -109284375 - MIR SINE MIR -72 136 37 1833 167 3 10 chr10 31033845 31034156 -109282609 - AluJo SINE Alu -3 309 1 4043 146 12 17 chr10 31034725 31035107 -109281658 - L1PA15 LINE L1 0 6165 5786 2396 77 0 10 chr10 31035107 31035405 -109281360 - AluY SINE Alu -16 295 1 4043 146 12 17 chr10 31035405 31035678 -109281087 - L1PA15 LINE L1 -379 5786 5513 215 265 0 0 chr10 31037874 31037923 -109278842 + T-rich Low_complexity Low_complexity 1 49 0 3983 99 9 7 chr10 31038073 31038649 -109278116 + L1PA13 LINE L1 5587 6163 0 276 345 35 9 chr10 31038762 31038878 -109277887 - L1MEc LINE L1 -4738 1658 1540 294 271 78 42 chr10 31039105 31039297 -109277468 - L1MEc LINE L1 -4945 1260 1062 2244 117 0 0 chr10 31039497 31039788 -109276977 - AluSx SINE Alu -21 291 1 662 233 0 0 chr10 31043300 31043429 -109273336 + FLAM_A SINE Alu 4 132 -1 189 0 0 0 chr10 31043429 31043450 -109273315 + (GGA)n Simple_repeat Simple_repeat 1 21 0 641 233 58 59 chr10 31043652 31043918 -109272847 - MLT1D LTR MaLR 0 505 171 2112 117 3 0 chr10 31043918 31044200 -109272565 - AluSp SINE Alu -30 283 1 641 233 58 59 chr10 31044200 31044365 -109272400 - MLT1D LTR MaLR -334 171 7 323 262 48 19 chr10 31044924 31045027 -109271738 + L2 LINE L2 3208 3313 0 199 294 88 29 chr10 31045310 31045412 -109271353 + MIR SINE MIR 23 130 -78 970 138 11 17 chr10 31045442 31045616 -109271149 - AluSp SINE Alu -29 284 112 323 262 48 19 chr10 31045980 31046083 -109270682 + L2 LINE L2 3208 3313 0 293 290 154 54 chr10 31046362 31046461 -109270304 + MIR SINE MIR 4 92 -170 2215 96 3 0 chr10 31046461 31046780 -109269985 - AluSp SINE Alu 0 320 1 293 290 154 54 chr10 31046780 31046900 -109269865 + MIR SINE MIR 92 246 -16 802 167 8 0 chr10 31048472 31048604 -109268161 - FLAM_A SINE Alu 0 133 1 2200 107 0 22 chr10 31048891 31049210 -109267555 - AluSx SINE Alu 0 312 1 321 216 9 18 chr10 31049384 31049495 -109267270 + CT-rich Low_complexity Low_complexity 2 111 0 415 217 21 101 chr10 31049776 31049878 -109266887 + L2 LINE L2 2446 2555 -759 2238 110 0 0 chr10 31049878 31050170 -109266595 + AluSx SINE Alu 1 292 -20 351 0 0 0 chr10 31050170 31050209 -109266556 + (CA)n Simple_repeat Simple_repeat 2 40 0 415 217 21 101 chr10 31050209 31050294 -109266471 + L2 LINE L2 2553 2619 -695 1151 238 87 0 chr10 31050301 31050578 -109266187 - MER63 DNA MER1_type 0 1061 761 1094 186 5 29 chr10 31050595 31050799 -109265966 - AluJo SINE Alu -18 294 96 308 215 0 25 chr10 31051358 31051437 -109265328 - L2 LINE L2 -74 3239 3163 1739 121 0 0 chr10 31052003 31052234 -109264531 + AluSg/x SINE Alu 70 300 -10 2670 50 3 0 chr10 31052235 31052558 -109264207 + L1PA13 LINE L1 5822 6145 -18 2250 108 0 0 chr10 31053100 31053396 -109263369 + AluSg1 SINE Alu 1 296 -13 2125 102 3 7 chr10 31053396 31053680 -109263085 + AluSp SINE Alu 1 283 -30 210 91 0 0 chr10 31054313 31054346 -109262419 + (TG)n Simple_repeat Simple_repeat 2 34 0 337 327 71 15 chr10 31055591 31055857 -109260908 + LTR33 LTR ERVL 241 521 0 947 261 24 10 chr10 31055857 31056148 -109260617 - HAL1 LINE L1 -835 1672 1378 409 247 0 0 chr10 31056157 31056230 -109260535 - Tigger7 DNA MER2_type -11 2476 2404 1399 232 0 4 chr10 31056256 31056510 -109260255 - Tigger7 DNA MER2_type -2234 253 1 2622 259 97 54 chr10 31056528 31057546 -109259219 - HAL1 LINE L1 -1165 1342 370 189 0 0 0 chr10 31057546 31057567 -109259198 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2622 259 97 54 chr10 31057567 31057787 -109258978 - HAL1 LINE L1 -2137 370 44 2046 230 68 30 chr10 31057787 31058387 -109258378 - MLT1E2 LTR MaLR -1 625 3 2622 259 97 54 chr10 31058387 31058431 -109258334 - HAL1 LINE L1 -2463 44 3 446 325 45 29 chr10 31058463 31058771 -109257994 + L3 LINE CR1 1136 1448 -129 1406 183 68 16 chr10 31058854 31059176 -109257589 + MER44D DNA MER2_type 1 609 0 602 198 33 0 chr10 31059277 31059398 -109257367 - L2 LINE L2 -1 3312 3188 2294 118 0 0 chr10 31059911 31060217 -109256548 - AluSx SINE Alu -2 310 5 557 254 40 23 chr10 31060763 31060936 -109255829 + MIR SINE MIR 86 261 -1 183 328 123 0 chr10 31061137 31061259 -109255506 + MIR SINE MIR 69 205 -57 454 239 26 17 chr10 31062208 31062325 -109254440 + MIR3 SINE MIR 83 200 -8 2305 74 0 0 chr10 31062555 31062878 -109253887 - AluY SINE Alu 0 323 1 442 260 49 16 chr10 31063152 31063275 -109253490 - L2 LINE L2 0 3313 3187 1024 182 51 14 chr10 31063417 31063631 -109253134 - L1MA9 LINE L1 -153 6159 5938 470 118 40 0 chr10 31063631 31063706 -109253059 + L1MA9 LINE L1 6234 6312 0 2462 74 3 0 chr10 31063859 31064157 -109252608 + AluY SINE Alu 1 299 -12 2083 112 21 0 chr10 31065067 31065353 -109251412 - AluSx SINE Alu -8 304 13 769 214 14 0 chr10 31065568 31065713 -109251052 - Tigger3(Golem) DNA MER2_type -1 3028 2882 2211 93 3 7 chr10 31065747 31066049 -109250716 - AluY SINE Alu -7 304 4 236 279 156 39 chr10 31066194 31066348 -109250417 + MER3 DNA MER1_type 2 126 -83 247 204 0 19 chr10 31066561 31066615 -109250150 + (CA)n Simple_repeat Simple_repeat 1 53 0 2931 7 0 0 chr10 31067342 31067652 -109249113 - AluY SINE Alu -1 310 1 318 220 0 0 chr10 31067690 31067790 -109248975 + (TG)n Simple_repeat Simple_repeat 1 100 0 823 121 0 0 chr10 31068536 31068652 -109248113 + FLAM_C SINE Alu 20 135 -8 21 57 0 0 chr10 31068659 31068694 -109248071 + AT_rich Low_complexity Low_complexity 1 35 0 2211 100 28 0 chr10 31068706 31068995 -109247770 + AluSg SINE Alu 3 299 -11 364 217 7 28 chr10 31069240 31069383 -109247382 + T-rich Low_complexity Low_complexity 3 142 0 22 35 0 0 chr10 31069547 31069576 -109247189 + AT_rich Low_complexity Low_complexity 1 29 0 202 122 73 0 chr10 31069672 31069713 -109247052 + (TATG)n Simple_repeat Simple_repeat 1 44 0 956 178 0 6 chr10 31070729 31070898 -109245867 + FRAM SINE Alu 1 161 -15 1301 102 5 5 chr10 31072011 31072207 -109244558 - AluSg/x SINE Alu 0 310 115 677 233 133 89 chr10 31072255 31072598 -109244167 - MER34 LTR ERV1 0 542 167 1939 137 0 7 chr10 31072598 31072897 -109243868 + AluSx SINE Alu 1 297 -15 677 233 133 89 chr10 31072897 31073072 -109243693 - MER34 LTR ERV1 -375 167 1 1353 151 5 0 chr10 31073284 31073496 -109243269 + AluSx SINE Alu 1 213 -99 691 286 44 18 chr10 31074521 31074748 -109242017 + MIR SINE MIR 28 260 -2 4491 51 7 0 chr10 31074805 31075356 -109241409 - L1PA7 LINE L1 -4 6150 5596 1431 159 11 30 chr10 31076000 31076264 -109240501 + AluJo SINE Alu 18 276 -36 180 0 0 0 chr10 31076269 31076289 -109240476 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 234 276 66 0 chr10 31076301 31076377 -109240388 + MER5A DNA MER1_type 52 132 -57 2106 109 10 3 chr10 31076423 31076725 -109240040 - AluSc SINE Alu -5 304 1 1650 136 110 4 chr10 31078900 31079172 -109237593 + AluSx SINE Alu 1 301 -11 5053 185 140 104 chr10 31079615 31081309 -109235456 - MER52A LTR ERV1 0 1755 1 367 340 79 46 chr10 31081987 31082290 -109234475 + L1MC4a LINE L1 4369 4681 -1465 355 287 92 8 chr10 31082302 31082553 -109234212 + L1MC4a LINE L1 4742 5013 -1133 2061 133 0 0 chr10 31082566 31082867 -109233898 + AluSx SINE Alu 1 301 -11 476 283 23 40 chr10 31082921 31083274 -109233491 + L1MC5 LINE L1 7581 7927 -34 764 179 0 0 chr10 31083277 31083400 -109233365 + FLAM_C SINE Alu 2 124 -19 1994 123 7 0 chr10 31083412 31083712 -109233053 + AluSx SINE Alu 1 302 -10 315 259 60 43 chr10 31083712 31083819 -109232946 + L1MC4a LINE L1 5028 5139 -1007 204 138 46 0 chr10 31083851 31083916 -109232849 + (TA)n Simple_repeat Simple_repeat 2 69 0 555 244 249 41 chr10 31084048 31084503 -109232262 + L1MC4a LINE L1 5297 5403 -743 1214 125 87 168 chr10 31084605 31084751 -109232014 - MER44D DNA MER2_type -1882 609 453 1494 194 0 14 chr10 31084751 31085035 -109231730 + AluJo SINE Alu 1 280 -32 1214 125 87 168 chr10 31085035 31085097 -109231668 - MER44D DNA MER2_type -2038 453 388 1855 116 0 72 chr10 31085097 31085417 -109231348 + AluSx SINE Alu 1 297 -15 1214 125 87 168 chr10 31085417 31085576 -109231189 - MER44D DNA MER2_type -2103 388 1 2229 95 0 0 chr10 31086623 31086917 -109229848 - AluSq SINE Alu -19 294 1 22 0 0 0 chr10 31086927 31086949 -109229816 + AT_rich Low_complexity Low_complexity 1 22 0 278 310 100 0 chr10 31087892 31087992 -109228773 - MIR SINE MIR -150 112 3 484 245 37 31 chr10 31089128 31089291 -109227474 - MER5B DNA MER1_type -13 165 2 865 215 6 0 chr10 31089416 31089588 -109227177 + FRAM SINE Alu 1 172 -4 2080 110 0 19 chr10 31089904 31090212 -109226553 + AluSx SINE Alu 1 302 -10 2331 157 96 26 chr10 31091217 31091715 -109225050 - L1MB3 LINE L1 0 6183 5651 1379 218 200 43 chr10 31091773 31091921 -109224844 - MER50 LTR ERV1 -19 715 592 1898 93 72 0 chr10 31091921 31092199 -109224566 + AluSx SINE Alu 1 298 -14 1379 218 200 43 chr10 31092199 31092660 -109224105 - MER50 LTR ERV1 -142 592 10 1832 149 0 7 chr10 31093133 31093428 -109223337 - AluJo SINE Alu -15 297 5 2147 135 28 38 chr10 31094726 31094764 -109222001 - L1MC1 LINE L1 -15 6318 6281 1855 173 0 0 chr10 31094764 31095070 -109221695 + AluJb SINE Alu 1 306 -6 2147 135 28 38 chr10 31095070 31095288 -109221477 - L1MC1 LINE L1 -52 6281 6065 1584 165 71 9 chr10 31095288 31095628 -109221137 - MER46B DNA MER2_type 0 236 1 2147 135 28 38 chr10 31095628 31095762 -109221003 - L1MC1 LINE L1 -268 6065 5931 2014 138 0 3 chr10 31097347 31097652 -109219113 - AluSx SINE Alu -8 304 1 443 195 195 0 chr10 31098488 31098611 -109218154 + L2 LINE L2 3167 3313 0 2385 71 3 3 chr10 31099425 31099734 -109217031 - AluSg1 SINE Alu 0 309 1 1014 191 92 97 chr10 31100370 31100836 -109215929 - MER4C LTR ERV1 0 465 2 2604 96 14 3 chr10 31102408 31102772 -109213993 - L1PA13 LINE L1 -2 6161 5794 471 114 0 0 chr10 31103090 31103169 -109213596 + L1MA5A LINE L1 6214 6292 -5 1349 184 25 22 chr10 31103978 31104102 -109212663 + AluJb SINE Alu 4 126 -186 1506 186 72 0 chr10 31104102 31104393 -109212372 + AluJb SINE Alu 1 312 0 1349 184 25 22 chr10 31104393 31104545 -109212220 + AluJb SINE Alu 126 281 -31 2253 174 22 26 chr10 31104757 31105216 -109211549 - LTR32 LTR ERVL 0 471 15 1948 131 0 7 chr10 31105864 31106161 -109210604 + AluJb SINE Alu 1 295 -17 1587 160 29 11 chr10 31106690 31107007 -109209758 - AluJo SINE Alu 0 324 3 542 176 9 19 chr10 31107223 31107331 -109209434 - L1MB3 LINE L1 -8 6175 6069 202 235 118 35 chr10 31107431 31107516 -109209249 + L3 LINE CR1 1365 1456 -121 1103 113 40 17 chr10 31107521 31107698 -109209067 + MER4D LTR ERV1 1 181 -722 5365 123 12 10 chr10 31107698 31108504 -109208261 + L1PA15 LINE L1 5350 6157 -8 3360 141 65 73 chr10 31108504 31109200 -109207565 + MER4D LTR ERV1 183 872 0 3145 122 8 112 chr10 31109815 31110456 -109206309 + MER4B LTR ERV1 1 574 -36 536 237 0 52 chr10 31110894 31111029 -109205736 + L2 LINE L2 3180 3307 -6 192 307 0 67 chr10 31111034 31111109 -109205656 + L2 LINE L2 3133 3202 -70 200 182 0 0 chr10 31111936 31111969 -109204796 + CT-rich Low_complexity Low_complexity 2 34 0 354 45 0 0 chr10 31111972 31112016 -109204749 + (CA)n Simple_repeat Simple_repeat 2 45 0 2237 112 0 0 chr10 31112482 31112786 -109203979 - AluSx SINE Alu -8 304 1 218 296 57 23 chr10 31113025 31113113 -109203652 + L2 LINE L2 2954 3044 -228 1537 185 14 20 chr10 31113225 31113522 -109203243 - AluJo SINE Alu -17 295 1 393 169 60 0 chr10 31113527 31113610 -109203155 - L1PA16 LINE L1 0 6166 6079 988 160 0 11 chr10 31113700 31113881 -109202884 + AluJb SINE Alu 134 312 0 206 31 0 31 chr10 31114188 31114220 -109202545 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 1971 115 4 0 chr10 31114220 31114499 -109202266 - AluSx SINE Alu -32 280 1 3729 111 23 6 chr10 31114844 31115359 -109201406 + MER1A DNA MER1_type 4 527 0 1488 152 17 52 chr10 31115703 31115992 -109200773 + AluJo SINE Alu 2 280 -32 3474 101 8 10 chr10 31117114 31117608 -109199157 - LOR1a LTR ERV1 0 497 5 1353 228 37 34 chr10 31117906 31118204 -109198561 - AluJo SINE Alu -2 300 2 2011 191 50 46 chr10 31118299 31118802 -109197963 + MLT1D LTR MaLR 1 505 0 242 238 262 0 chr10 31118956 31119040 -109197725 + L2 LINE L2 3208 3313 0 1618 170 17 17 chr10 31119085 31119374 -109197391 - AluJb SINE Alu -23 289 1 1789 121 83 78 chr10 31119617 31119816 -109196949 + THE1C LTR MaLR 1 204 -171 225 0 0 0 chr10 31119816 31119841 -109196924 + (TC)n Simple_repeat Simple_repeat 1 25 0 1789 121 83 78 chr10 31119841 31120014 -109196751 + THE1C LTR MaLR 204 375 0 2078 128 0 0 chr10 31120208 31120489 -109196276 + AluSx SINE Alu 1 281 -31 191 0 0 62 chr10 31120489 31120521 -109196244 + (CAAAA)n Simple_repeat Simple_repeat 1 180 0 244 360 84 27 chr10 31120523 31120784 -109195981 - L2 LINE L2 -20 3252 2977 209 280 20 0 chr10 31120784 31120834 -109195931 - L2 LINE L2 -12 3260 3210 22 0 0 0 chr10 31120842 31120864 -109195901 + AT_rich Low_complexity Low_complexity 1 22 0 743 168 0 0 chr10 31120919 31121038 -109195727 - AluJb SINE Alu -1 311 193 1042 245 32 0 chr10 31121093 31121309 -109195456 - MER58A DNA MER1_type -1 223 1 1834 178 3 3 chr10 31123284 31123588 -109193177 - AluJo SINE Alu -7 305 2 734 282 61 69 chr10 31123733 31124475 -109192290 + L2 LINE L2 2539 3283 -30 2277 115 0 0 chr10 31124648 31124943 -109191822 + AluSx SINE Alu 1 295 -17 380 127 0 0 chr10 31125167 31125222 -109191543 - Alu SINE Alu -6 296 242 2088 221 74 46 chr10 31125495 31125551 -109191214 - L1ME1 LINE L1 -5 6161 6108 1709 183 7 17 chr10 31125551 31125852 -109190913 - AluJo SINE Alu -14 298 1 2088 221 74 46 chr10 31125852 31126446 -109190319 - L1ME1 LINE L1 -58 6108 5493 662 62 0 0 chr10 31126448 31126529 -109190236 - THE1B LTR MaLR 0 364 284 474 54 0 0 chr10 31126529 31126585 -109190180 - THE1B LTR MaLR -308 56 1 1249 165 0 19 chr10 31127202 31127408 -109189357 + AluJb SINE Alu 1 202 -110 2291 85 3 0 chr10 31127595 31127908 -109188857 - AluY SINE Alu 0 314 1 1703 139 68 25 chr10 31128170 31128451 -109188314 - AluJo SINE Alu -6 306 14 243 229 0 0 chr10 31128684 31128745 -109188020 + (TATG)n Simple_repeat Simple_repeat 3 63 0 1805 98 124 0 chr10 31129770 31130035 -109186730 + AluSx SINE Alu 5 302 0 1875 151 0 7 chr10 31130309 31130593 -109186172 - AluJo SINE Alu -30 282 1 198 0 0 0 chr10 31130621 31130643 -109186122 + (TG)n Simple_repeat Simple_repeat 2 23 0 191 303 0 15 chr10 31131182 31131248 -109185517 - L2 LINE L2 -214 3058 2994 804 172 0 8 chr10 31131501 31131635 -109185130 + FLAM_C SINE Alu 1 133 0 2343 94 0 0 chr10 31132280 31132578 -109184187 - AluSc SINE Alu -11 298 1 1707 168 18 4 chr10 31132861 31133135 -109183630 - AluJb SINE Alu -34 278 1 1626 178 34 20 chr10 31133135 31133428 -109183337 - AluJo SINE Alu -15 297 1 1673 186 10 10 chr10 31134683 31134990 -109181775 - AluJb SINE Alu -5 307 1 183 143 29 0 chr10 31135941 31135976 -109180789 + MER5A DNA MER1_type 1 36 -153 215 269 104 0 chr10 31136176 31136243 -109180522 - L2 LINE L2 -1 3312 3239 521 278 44 28 chr10 31136321 31136501 -109180264 + MIR SINE MIR 6 188 -74 2401 156 44 29 chr10 31136581 31137035 -109179730 - LOR1b LTR ERV1 0 461 1 898 180 4 146 chr10 31137226 31137296 -109179469 + L1MB8 LINE L1 3909 3987 -2159 2057 112 41 0 chr10 31137296 31137590 -109179175 + AluSc SINE Alu 1 306 -3 898 180 4 146 chr10 31137590 31137765 -109179000 + L1MB8 LINE L1 3987 4119 -2027 2815 178 34 38 chr10 31137765 31137788 -109178977 + MLT2B3 LTR ERVL 1 23 -531 2270 180 36 79 chr10 31137788 31138367 -109178398 + MLT2B3 LTR ERVL 1 554 0 2815 178 34 38 chr10 31138367 31138899 -109177866 + MLT2B3 LTR ERVL 23 554 0 4540 189 56 37 chr10 31138901 31139955 -109176810 + L1MB8 LINE L1 4117 5149 -1029 2193 134 132 5 chr10 31139955 31140335 -109176430 - MSTA LTR MaLR 0 428 1 761 163 23 0 chr10 31140335 31140464 -109176301 + FLAM_C SINE Alu 1 132 -1 4540 189 56 37 chr10 31140464 31141421 -109175344 + L1MB8 LINE L1 5148 6165 -13 255 31 0 0 chr10 31141426 31141458 -109175307 + (TG)n Simple_repeat Simple_repeat 2 33 0 553 284 209 48 chr10 31141484 31141815 -109174950 - L2 LINE L2 -799 2515 2239 279 0 0 0 chr10 31141815 31141846 -109174919 + (GA)n Simple_repeat Simple_repeat 2 32 0 553 284 209 48 chr10 31141846 31142159 -109174606 - L2 LINE L2 -1075 2239 1767 1085 195 108 16 chr10 31142533 31142784 -109173981 - AluJo SINE Alu -25 287 14 2180 172 34 3 chr10 31143318 31143702 -109173063 - MSTD LTR MaLR 0 396 1 1550 172 0 69 chr10 31144290 31144609 -109172156 - AluJo SINE Alu -15 297 1 216 0 0 0 chr10 31145470 31145494 -109171271 + (T)n Simple_repeat Simple_repeat 1 24 0 237 33 0 0 chr10 31145811 31145841 -109170924 + (CA)n Simple_repeat Simple_repeat 2 31 0 228 163 0 0 chr10 31146119 31146162 -109170603 + A-rich Low_complexity Low_complexity 1 43 0 414 217 104 26 chr10 31147333 31147448 -109169317 - L2 LINE L2 -2 3311 3188 2146 125 0 0 chr10 31147882 31148178 -109168587 - AluSx SINE Alu -16 296 1 686 175 0 0 chr10 31148765 31148885 -109167880 - AluSg/x SINE Alu 0 310 191 2143 123 0 7 chr10 31150480 31150773 -109165992 + AluSx SINE Alu 1 291 -21 2036 125 25 0 chr10 31150997 31151349 -109165416 - AluSx SINE Alu 0 359 1 2012 114 11 0 chr10 31151860 31152177 -109164588 - AluSq SINE Alu 0 320 1 795 131 31 15 chr10 31152210 31152340 -109164425 - FLAM_C SINE Alu -1 132 1 24 32 0 0 chr10 31152403 31152434 -109164331 + AT_rich Low_complexity Low_complexity 1 31 0 2248 111 10 0 chr10 31153699 31153996 -109162769 + AluSq SINE Alu 1 300 -13 2235 119 3 0 chr10 31153997 31154300 -109162465 + AluSc SINE Alu 1 304 -5 646 233 0 0 chr10 31154377 31154510 -109162255 + FLAM_A SINE Alu 6 138 -4 2235 100 0 13 chr10 31154986 31155286 -109161479 - AluSq SINE Alu -17 296 1 2056 192 54 18 chr10 31155286 31155726 -109161039 - L1MD1 LINE L1 -7 6235 5777 1016 241 98 50 chr10 31155735 31155959 -109160806 - L1MD1 LINE L1 -1185 4961 4749 2223 96 0 26 chr10 31155959 31156261 -109160504 - AluSx SINE Alu -16 296 3 1016 241 98 50 chr10 31156261 31156357 -109160408 - L1MD1 LINE L1 -1397 4749 4659 1565 186 7 24 chr10 31156357 31156676 -109160089 + AluJb SINE Alu 1 314 0 1016 241 98 50 chr10 31156676 31156773 -109159992 - L1MD1 LINE L1 -1487 4659 4522 206 121 0 0 chr10 31159085 31159118 -109157647 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 313 282 77 51 chr10 31160021 31160177 -109156588 + MER20B DNA MER1_type 5 164 -619 2304 98 0 16 chr10 31160316 31160622 -109156143 - AluSg SINE Alu -8 302 2 207 0 0 0 chr10 31160711 31160734 -109156031 + (TG)n Simple_repeat Simple_repeat 2 24 0 2298 119 0 3 chr10 31161055 31161366 -109155399 - AluSx SINE Alu -1 311 2 2290 106 0 0 chr10 31161779 31162080 -109154685 - AluSg SINE Alu -9 301 1 1107 83 0 0 chr10 31162080 31162213 -109154552 - AluSg SINE Alu -177 133 1 340 289 66 90 chr10 31163505 31163585 -109153180 - MIR SINE MIR 0 262 182 1615 154 41 41 chr10 31163585 31163877 -109152888 - AluJo SINE Alu -18 294 3 340 289 66 90 chr10 31163877 31164052 -109152713 - MIR SINE MIR -80 182 13 276 218 115 0 chr10 31164112 31164199 -109152566 - MER5A DNA MER1_type -84 105 9 1623 178 10 17 chr10 31167578 31167870 -109148895 - AluJo SINE Alu -22 290 1 2108 116 3 3 chr10 31168140 31168433 -109148332 - AluSq SINE Alu -20 293 1 2559 56 0 31 chr10 31168448 31168769 -109147996 - AluY SINE Alu 0 311 1 203 235 20 0 chr10 31169425 31169476 -109147289 - MIR3 SINE MIR -32 176 125 22 0 0 0 chr10 31169780 31169802 -109146963 + AT_rich Low_complexity Low_complexity 1 22 0 954 160 89 0 chr10 31169956 31170169 -109146596 - L1 LINE L1 -1593 4553 4322 4083 90 3 7 chr10 31170171 31170738 -109146027 + L1PB2 LINE L1 5586 6150 -1 2278 108 0 0 chr10 31170746 31171041 -109145724 + AluSc SINE Alu 1 295 -14 1608 183 0 4 chr10 31171079 31171347 -109145418 + AluJo SINE Alu 1 267 -45 24 0 0 0 chr10 31171363 31171387 -109145378 + AT_rich Low_complexity Low_complexity 1 24 0 236 170 0 94 chr10 31173511 31173617 -109143148 + (ACATG)n Simple_repeat Simple_repeat 4 99 0 2236 77 32 3 chr10 31173929 31174214 -109142551 + AluSx SINE Alu 1 293 -19 186 133 0 0 chr10 31174325 31174355 -109142410 + (TAA)n Simple_repeat Simple_repeat 2 31 0 26 30 0 0 chr10 31174372 31174405 -109142360 + AT_rich Low_complexity Low_complexity 1 33 0 924 128 19 6 chr10 31174714 31174870 -109141895 + L1PA16 LINE L1 6005 6162 -4 2149 146 3 0 chr10 31175131 31175440 -109141325 - AluJb SINE Alu 0 312 3 256 267 89 11 chr10 31175901 31175991 -109140774 - L2 LINE L2 -6 3266 3170 189 107 0 0 chr10 31178341 31178369 -109138396 + (TTA)n Simple_repeat Simple_repeat 2 29 0 183 184 0 0 chr10 31179022 31179060 -109137705 + CT-rich Low_complexity Low_complexity 4 41 0 243 61 0 0 chr10 31179070 31179103 -109137662 + (CA)n Simple_repeat Simple_repeat 2 34 0 417 39 0 0 chr10 31179103 31179154 -109137611 + (TCCA)n Simple_repeat Simple_repeat 4 54 0 2635 55 0 3 chr10 31179879 31180190 -109136575 - AluY SINE Alu -1 310 1 205 191 0 32 chr10 31181748 31181811 -109134954 + GA-rich Low_complexity Low_complexity 2 62 0 30 0 0 0 chr10 31181982 31182012 -109134753 + AT_rich Low_complexity Low_complexity 1 30 0 1707 148 0 22 chr10 31182023 31182293 -109134472 - AluJo SINE Alu -23 289 26 230 326 133 0 chr10 31183611 31183709 -109133056 + MIR SINE MIR 49 159 -103 429 196 84 9 chr10 31183733 31183840 -109132925 - MER63 DNA MER1_type -273 789 675 249 281 21 30 chr10 31184209 31184375 -109132390 - MIR SINE MIR -17 191 30 2420 83 3 3 chr10 31185133 31185445 -109131320 - AluSx SINE Alu 0 312 1 477 297 70 16 chr10 31185887 31186143 -109130622 + L3 LINE CR1 1109 1378 -199 22 70 0 0 chr10 31186660 31186703 -109130062 + AT_rich Low_complexity Low_complexity 1 43 0 2132 87 61 0 chr10 31186803 31187080 -109129685 + AluY SINE Alu 1 294 -17 23 33 0 0 chr10 31187446 31187476 -109129289 + AT_rich Low_complexity Low_complexity 1 30 0 546 235 53 21 chr10 31187511 31187698 -109129067 - L1MB8 LINE L1 0 6178 5986 512 148 30 20 chr10 31188465 31188566 -109128199 + L1MC4 LINE L1 7813 7914 -128 273 138 72 58 chr10 31188899 31188992 -109127773 + (TATAA)n Simple_repeat Simple_repeat 5 102 -42 1947 157 0 3 chr10 31188992 31189279 -109127486 - AluSx SINE Alu -26 286 1 273 138 72 58 chr10 31189279 31189323 -109127442 + (TATAA)n Simple_repeat Simple_repeat 102 144 0 346 268 138 8 chr10 31189853 31189976 -109126789 + MER20B DNA MER1_type 1 139 -644 26 0 0 0 chr10 31190346 31190372 -109126393 + AT_rich Low_complexity Low_complexity 1 26 0 1925 157 0 7 chr10 31190526 31190819 -109125946 + AluJb SINE Alu 1 291 -21 204 97 0 0 chr10 31190843 31190874 -109125891 + (GGGGA)n Simple_repeat Simple_repeat 5 35 0 213 121 0 0 chr10 31191459 31191492 -109125273 + (TG)n Simple_repeat Simple_repeat 2 34 0 25 83 0 0 chr10 31192406 31192466 -109124299 + AT_rich Low_complexity Low_complexity 1 60 0 285 75 0 0 chr10 31192570 31192610 -109124155 + (TG)n Simple_repeat Simple_repeat 2 41 0 213 266 0 47 chr10 31192636 31192700 -109124065 + L2 LINE L2 3180 3240 -73 1587 174 10 40 chr10 31193262 31193560 -109123205 - AluJo SINE Alu -23 289 1 1097 159 11 0 chr10 31193585 31193761 -109123004 - AluJb SINE Alu 0 312 135 204 262 167 0 chr10 31193883 31193967 -109122798 + L2 LINE L2 3132 3229 -43 191 61 30 0 chr10 31194307 31194340 -109122425 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2177 98 0 7 chr10 31194342 31194627 -109122138 - AluSq SINE Alu -30 283 1 678 194 0 8 chr10 31194805 31194929 -109121836 + FLAM_C SINE Alu 1 123 -10 2241 82 0 53 chr10 31195341 31195645 -109121120 - AluSg SINE Alu -10 300 13 23 86 0 0 chr10 31195673 31195731 -109121034 + AT_rich Low_complexity Low_complexity 1 58 0 1864 164 0 22 chr10 31195783 31196095 -109120670 - AluJo SINE Alu -7 305 1 1894 150 3 20 chr10 31197462 31197768 -109118997 - AluJo SINE Alu -11 301 1 222 235 0 0 chr10 31197827 31197878 -109118887 + T-rich Low_complexity Low_complexity 1 51 0 7870 19 0 15 chr10 31197888 31198983 -109117782 - L1PA3 LINE L1 0 6155 5066 2522 87 0 0 chr10 31202040 31202349 -109114416 - AluSc SINE Alu 0 309 1 1955 129 16 19 chr10 31203141 31203450 -109113315 - AluJb SINE Alu -3 309 2 242 268 28 0 chr10 31204214 31204285 -109112480 + GA-rich Low_complexity Low_complexity 4 76 0 934 235 176 12 chr10 31204317 31204636 -109112129 + L3 LINE CR1 771 1141 -436 972 62 78 0 chr10 31204713 31204842 -109111923 + MER85 DNA T2_type 1 139 0 1655 112 42 0 chr10 31205132 31205391 -109111374 + L1MA2 LINE L1 6035 6304 0 582 181 211 0 chr10 31206466 31206599 -109110166 - L1ME2 LINE L1 0 6164 6004 304 246 94 58 chr10 31207364 31207502 -109109263 + MIR SINE MIR 44 186 -76 1523 256 93 9 chr10 31207635 31208173 -109108592 - L2 LINE L2 -434 2880 2298 1811 143 3 18 chr10 31208716 31209045 -109107720 - AluJo SINE Alu 0 325 1 1660 241 21 26 chr10 31209082 31209501 -109107264 - MER47B DNA MER2_type 0 418 2 186 71 0 0 chr10 31210785 31210813 -109105952 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 2306 108 0 3 chr10 31210989 31211296 -109105469 - AluSq SINE Alu -7 306 1 1427 151 20 0 chr10 31211503 31211748 -109105017 - L1PA15 LINE L1 -2 6163 5914 334 321 127 27 chr10 31213064 31213285 -109103480 - MIR SINE MIR 0 262 20 1740 190 3 3 chr10 31213393 31213703 -109103062 - AluJo SINE Alu -2 310 1 303 122 0 0 chr10 31214833 31214882 -109101883 + (GAA)n Simple_repeat Simple_repeat 2 50 0 674 131 0 9 chr10 31217362 31217469 -109099296 + FLAM_C SINE Alu 25 130 -13 1905 157 0 16 chr10 31217722 31218035 -109098730 - AluJo SINE Alu -4 308 1 404 317 6 19 chr10 31218526 31218687 -109098078 - L1MC5 LINE L1 -109 7852 7694 2297 82 7 0 chr10 31218721 31219003 -109097762 - AluSx SINE Alu -3 309 26 1851 165 7 0 chr10 31219176 31219467 -109097298 - AluJb SINE Alu -19 293 1 2374 76 7 10 chr10 31219895 31220199 -109096566 + AluSx SINE Alu 1 303 -9 2366 102 0 0 chr10 31220199 31220503 -109096262 + AluSc SINE Alu 1 304 -5 2369 110 0 3 chr10 31221321 31221631 -109095134 + AluSc SINE Alu 1 309 0 180 125 0 0 chr10 31222282 31222314 -109094451 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 1495 137 62 0 chr10 31222316 31222554 -109094211 - AluJb SINE Alu -21 291 52 441 154 71 13 chr10 31226253 31226407 -109090358 + L1MA4A LINE L1 6055 6278 -25 2196 113 0 0 chr10 31226672 31226983 -109089782 - AluY SINE Alu 0 311 1 1741 156 0 29 chr10 31226985 31227299 -109089466 - AluJo SINE Alu -7 305 1 2099 118 0 0 chr10 31229045 31229351 -109087414 - AluSx SINE Alu -6 306 1 219 88 0 0 chr10 31229499 31229533 -109087232 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1853 134 3 3 chr10 31229535 31229818 -109086947 - AluSx SINE Alu -29 283 1 1837 122 3 52 chr10 31230467 31230795 -109085970 - AluJo SINE Alu 0 312 1 228 280 38 61 chr10 31231887 31232019 -109084746 + MIR SINE MIR 65 193 -69 197 187 27 107 chr10 31233119 31233194 -109083571 - MIR3 SINE MIR -30 178 110 778 136 40 0 chr10 31233249 31233374 -109083391 + AluJo SINE Alu 6 135 -177 1361 213 3 20 chr10 31233383 31233679 -109083086 + AluJo SINE Alu 1 291 -21 25 108 0 0 chr10 31233679 31233781 -109082984 + AT_rich Low_complexity Low_complexity 1 102 0 1779 96 122 4 chr10 31234365 31234636 -109082129 - AluSg1 SINE Alu -6 303 1 325 216 0 14 chr10 31237524 31237598 -109079167 - Charlie5 DNA MER1_type -27 2585 2513 1628 170 42 0 chr10 31237734 31238022 -109078743 + AluJb SINE Alu 1 300 -12 2255 99 0 3 chr10 31238054 31238358 -109078407 - AluSp SINE Alu -10 303 1 657 119 0 0 chr10 31238544 31238645 -109078120 + (TC)n Simple_repeat Simple_repeat 2 102 0 324 243 0 0 chr10 31240302 31240450 -109076315 + (TG)n Simple_repeat Simple_repeat 2 149 0 1299 186 107 25 chr10 31241750 31242067 -109074698 - MER2 DNA MER2_type 0 344 2 5796 191 23 18 chr10 31242074 31242556 -109074209 - L1MC1 LINE L1 0 6333 5855 2032 94 3 20 chr10 31242556 31242876 -109073889 - AluSq SINE Alu 0 313 9 5796 191 23 18 chr10 31242876 31244224 -109072541 - L1MC1 LINE L1 -478 5855 4491 270 164 0 0 chr10 31245216 31245271 -109071494 + (CA)n Simple_repeat Simple_repeat 2 56 0 224 284 34 11 chr10 31246430 31246518 -109070247 + CT-rich Low_complexity Low_complexity 1 90 0 889 266 46 4 chr10 31246519 31246778 -109069987 - L1MC4 LINE L1 -152 7890 7621 1513 185 10 10 chr10 31248934 31249226 -109067539 - AluJo SINE Alu -20 292 1 1988 116 3 3 chr10 31249496 31249789 -109066976 - AluSq SINE Alu -20 293 1 2275 83 0 22 chr10 31249807 31250120 -109066645 - AluSx SINE Alu -1 311 6 183 362 0 0 chr10 31251001 31251048 -109065717 - MIR SINE MIR -139 69 23 23 0 0 0 chr10 31251740 31251763 -109065002 + AT_rich Low_complexity Low_complexity 1 23 0 925 183 26 65 chr10 31253686 31253731 -109063034 + MER58A DNA MER1_type 4 49 -2371 1814 143 30 7 chr10 31253731 31254032 -109062733 - AluJo SINE Alu -4 308 1 925 183 26 65 chr10 31254032 31254215 -109062550 + MER58A DNA MER1_type 49 223 -1 256 185 15 146 chr10 31255279 31255409 -109061356 - MLT1K LTR MaLR -8 580 468 676 294 37 15 chr10 31255497 31255851 -109060914 - MLT1K LTR MaLR -174 414 21 184 339 189 16 chr10 31256444 31256766 -109059999 + L3 LINE CR1 1199 1576 -1 837 149 0 22 chr10 31257323 31257457 -109059308 - FLAM_C SINE Alu 0 133 3 1818 159 0 0 chr10 31258077 31258378 -109058387 + AluJb SINE Alu 1 301 -11 310 272 33 11 chr10 31259535 31259627 -109057138 - MIR SINE MIR -150 112 19 231 330 75 9 chr10 31261058 31261164 -109055601 + MER5B DNA MER1_type 66 178 0 23 0 0 0 chr10 31262134 31262157 -109054608 + AT_rich Low_complexity Low_complexity 1 23 0 433 264 55 31 chr10 31264376 31264539 -109052226 - MER5B DNA MER1_type 0 178 12 1805 147 0 16 chr10 31265602 31265908 -109050857 + AluJo SINE Alu 12 312 0 1197 183 39 0 chr10 31266405 31266635 -109050130 - L1MA6 LINE L1 -75 6225 5987 21 36 0 0 chr10 31266703 31266731 -109050034 + AT_rich Low_complexity Low_complexity 1 28 0 387 56 0 0 chr10 31266737 31266791 -109049974 + (CA)n Simple_repeat Simple_repeat 2 55 0 193 219 16 94 chr10 31268260 31268324 -109048441 - L2 LINE L2 0 3272 3214 376 315 27 40 chr10 31268535 31268684 -109048081 - MIR SINE MIR -107 155 9 1683 143 0 14 chr10 31268971 31269250 -109047515 - AluJb SINE Alu -1 311 37 571 219 128 16 chr10 31269341 31269528 -109047237 + MIR SINE MIR 20 227 -35 2031 102 3 10 chr10 31270762 31271055 -109045710 + AluSg SINE Alu 1 291 -19 1346 188 41 11 chr10 31271233 31271504 -109045261 + AluJo SINE Alu 14 292 -20 413 255 223 48 chr10 31272156 31272532 -109044233 + L2 LINE L2 2871 3312 -1 1808 140 0 19 chr10 31272614 31272878 -109043887 + AluJb SINE Alu 21 279 -33 459 0 0 0 chr10 31273279 31273330 -109043435 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1638 152 57 8 chr10 31273335 31273599 -109043166 - AluJo SINE Alu -35 277 1 1032 150 0 6 chr10 31275788 31275955 -109040810 - AluJb SINE Alu -3 309 144 237 200 0 0 chr10 31278801 31278846 -109037919 - L2 LINE L2 -4 3268 3224 296 309 53 0 chr10 31278943 31279037 -109037728 - L2 LINE L2 -53 3219 3121 285 98 0 0 chr10 31279259 31279300 -109037465 + (TA)n Simple_repeat Simple_repeat 1 41 0 3110 167 124 3 chr10 31279316 31279962 -109036803 + L1MB7 LINE L1 5452 6176 -8 783 212 59 6 chr10 31280213 31280383 -109036382 - AluJb SINE Alu -12 300 122 402 262 161 0 chr10 31280813 31280962 -109035803 - MIR SINE MIR -10 252 80 24 32 0 0 chr10 31281137 31281168 -109035597 + AT_rich Low_complexity Low_complexity 1 31 0 261 285 94 60 chr10 31281200 31281435 -109035330 - L1ME LINE L1 -255 5866 5624 338 201 40 7 chr10 31281612 31281761 -109035004 + (TA)n Simple_repeat Simple_repeat 1 154 0 393 291 147 26 chr10 31281764 31282145 -109034620 - L1ME LINE L1 -751 5395 4969 207 296 43 43 chr10 31282406 31282592 -109034173 - MIR SINE MIR -13 249 64 618 185 23 118 chr10 31282633 31282874 -109033891 - MLT1J LTR MaLR -206 409 110 181 180 20 40 chr10 31282953 31283003 -109033762 - MIR SINE MIR -137 71 23 1828 177 0 7 chr10 31283458 31283768 -109032997 - AluJo SINE Alu -2 310 3 2642 140 74 21 chr10 31286700 31287003 -109029762 - LOR1a LTR ERV1 -1 496 158 1713 171 24 11 chr10 31287003 31287290 -109029475 - AluJo SINE Alu -13 299 9 2642 140 74 21 chr10 31287290 31287457 -109029308 - LOR1a LTR ERV1 -339 158 1 613 309 39 0 chr10 31287594 31287801 -109028964 - MIR SINE MIR -3 259 45 1512 228 0 3 chr10 31287822 31288116 -109028649 - AluJo SINE Alu -19 293 1 25 0 0 0 chr10 31288415 31288440 -109028325 + AT_rich Low_complexity Low_complexity 1 25 0 957 172 10 44 chr10 31288606 31288810 -109027955 + AluJo SINE Alu 101 297 -15 1624 141 62 72 chr10 31288815 31289106 -109027659 + AluJo SINE Alu 1 288 -24 39 0 0 0 chr10 31289110 31289149 -109027616 + AT_rich Low_complexity Low_complexity 1 39 0 25 0 0 0 chr10 31290046 31290071 -109026694 + AT_rich Low_complexity Low_complexity 1 25 0 2071 120 14 3 chr10 31290878 31291170 -109025595 + AluSx SINE Alu 1 295 -17 2362 109 0 0 chr10 31291995 31292299 -109024466 + AluSx SINE Alu 3 306 -6 1537 228 35 83 chr10 31293008 31293462 -109023303 + L1MB7 LINE L1 5668 6096 -88 1679 181 14 0 chr10 31293462 31293755 -109023010 + AluJo SINE Alu 1 297 -15 1537 228 35 83 chr10 31293755 31293817 -109022948 + L1MB7 LINE L1 6096 6159 -25 965 175 0 0 chr10 31294066 31294220 -109022545 + AluJb SINE Alu 148 301 -11 1408 211 24 10 chr10 31294536 31294834 -109021931 + AluJo SINE Alu 1 302 -10 1848 173 7 0 chr10 31295584 31295879 -109020886 + AluJb SINE Alu 1 297 -15 1887 157 7 3 chr10 31296524 31296811 -109019954 + AluJo SINE Alu 1 288 -24 1929 150 45 25 chr10 31296886 31297245 -109019520 + MLT1B LTR MaLR 22 387 -3 194 188 29 43 chr10 31297286 31297355 -109019410 - L2 LINE L2 -213 3059 2992 675 299 44 6 chr10 31300027 31300348 -109016417 - LTR16B LTR ERVL -1 463 131 1995 147 0 13 chr10 31300375 31300681 -109016084 - MER1B DNA MER1_type 0 339 38 736 270 57 5 chr10 31301440 31301651 -109015114 + MIR SINE MIR 31 252 -10 1645 186 40 15 chr10 31301696 31302024 -109014741 - MER58B DNA MER1_type 0 341 6 1335 167 22 13 chr10 31302378 31302606 -109014159 + MSTA LTR MaLR 1 230 -198 1254 204 26 0 chr10 31302622 31302852 -109013913 + MSTA LTR MaLR 191 426 0 411 250 26 0 chr10 31302913 31303029 -109013736 - MIR SINE MIR -62 200 82 3536 55 23 5 chr10 31303051 31303487 -109013278 + MLT2A1 LTR ERVL 1 444 0 2310 98 101 24 chr10 31303487 31303865 -109012900 + MER61C LTR ERV1 28 434 0 4683 158 11 66 chr10 31304430 31305386 -109011379 + MER4D LTR ERV1 1 903 0 636 83 31 10 chr10 31306062 31306158 -109010607 + MER4A LTR ERV1 1 98 -566 1839 146 6 19 chr10 31306158 31306508 -109010257 + MER4A LTR ERV1 261 664 0 274 290 0 0 chr10 31306524 31306593 -109010172 + (TA)n Simple_repeat Simple_repeat 1 69 0 2599 138 62 15 chr10 31306969 31307440 -109009325 + L1MB3 LINE L1 5684 6176 -7 234 0 0 0 chr10 31307591 31307617 -109009148 + (TA)n Simple_repeat Simple_repeat 2 27 0 1406 239 7 47 chr10 31307619 31308025 -109008740 - MLT2C1 LTR ERVL -7 390 1 225 0 0 0 chr10 31308028 31308053 -109008712 + (TA)n Simple_repeat Simple_repeat 2 26 0 339 96 0 0 chr10 31308068 31308120 -109008645 + (TG)n Simple_repeat Simple_repeat 1 52 0 591 184 208 0 chr10 31308346 31308471 -109008294 - FRAM SINE Alu -20 156 6 2008 165 72 78 chr10 31308524 31309063 -109007702 + LTR10A LTR ERV1 13 548 -61 973 201 73 29 chr10 31309072 31309345 -109007420 + LTR10A-int LTR ERV1 1 285 -6364 252 272 65 22 chr10 31309607 31309699 -109007066 + LTR10A-int LTR ERV1 975 1070 -5579 5760 85 9 47 chr10 31309707 31310855 -109005910 + HERV17 LTR ERV1 704 1719 -5177 388 202 167 0 chr10 31310858 31310942 -109005823 - LTR8 LTR ERV1 -438 253 156 1649 95 42 4 chr10 31310942 31311205 -109005560 + Harlequin LTR ERV1 1807 2079 -4817 647 149 28 0 chr10 31311205 31311312 -109005453 + MSTD LTR MaLR 287 396 0 1394 262 128 31 chr10 31311324 31311924 -109004841 - MER21B LTR ERV1 -144 787 38 611 151 0 28 chr10 31311937 31312043 -109004722 - FRAM SINE Alu -10 166 64 6963 131 22 18 chr10 31312141 31314326 -109002439 + L1MA3 LINE L1 4113 6305 0 246 327 40 25 chr10 31314399 31314601 -109002164 + HAL1 LINE L1 1513 1717 -790 28 0 0 0 chr10 31314782 31314810 -109001955 + AT_rich Low_complexity Low_complexity 1 28 0 1412 222 29 0 chr10 31315044 31315323 -109001442 + AluJo SINE Alu 1 287 -25 226 264 236 24 chr10 31315389 31315943 -109000822 + L1M4 LINE L1 2220 2891 -3255 1407 196 14 39 chr10 31316388 31316674 -109000091 + AluJo SINE Alu 1 279 -33 927 172 0 9 chr10 31316674 31316905 -108999860 + GA-rich Low_complexity Low_complexity 1 228 0 1083 91 11 11 chr10 31316997 31317173 -108999592 + (GAAA)n Simple_repeat Simple_repeat 1 176 0 192 259 0 0 chr10 31317250 31317304 -108999461 + GA-rich Low_complexity Low_complexity 4 57 0 880 132 0 13 chr10 31317324 31317483 -108999282 + (GGAA)n Simple_repeat Simple_repeat 4 160 0 2401 53 11 0 chr10 31317793 31318078 -108998687 - AluY SINE Alu -23 288 1 1905 176 76 83 chr10 31319162 31319678 -108997087 + MLT2B3 LTR ERVL 35 546 -8 414 130 13 52 chr10 31319904 31319981 -108996784 - FLAM SINE Alu -12 131 58 3426 197 24 83 chr10 31320184 31321214 -108995551 - LTR5 LTR ERVK 0 969 1 238 294 73 9 chr10 31321603 31321614 -108995151 - MIR SINE MIR -95 167 158 1859 167 52 0 chr10 31321614 31321943 -108994822 - MER7A DNA MER2_type -1 345 2 238 294 73 9 chr10 31321943 31322040 -108994725 - MIR SINE MIR -104 158 52 553 250 42 24 chr10 31322522 31322690 -108994075 - MER5B DNA MER1_type -4 174 4 807 209 11 11 chr10 31322702 31322879 -108993886 - MER5B DNA MER1_type -1 177 1 1935 263 39 26 chr10 31323227 31323812 -108992953 + MLT1E LTR MaLR 1 593 0 201 405 8 16 chr10 31323837 31323963 -108992802 - MIR SINE MIR -64 144 20 242 0 0 0 chr10 31324130 31324157 -108992608 - L1P LINE L1 -2054 4092 4066 * 4628 10 0 0 chr10 31324156 31324668 -108992097 + L1HS LINE L1 5644 6155 0 252 0 0 0 chr10 31324673 31324701 -108992064 + (A)n Simple_repeat Simple_repeat 1 28 0 190 283 38 0 chr10 31325283 31325336 -108991429 - MIR SINE MIR -78 130 76 304 266 28 0 chr10 31327077 31327186 -108989579 - L1M2 LINE L1 -443 5857 5746 * 461 237 9 9 chr10 31327184 31327298 -108989467 - L1MA5 LINE L1 -441 5859 5746 431 246 8 23 chr10 31327296 31327426 -108989339 - L1MA6 LINE L1 -441 5859 5732 * 434 286 68 13 chr10 31327593 31327827 -108988938 + L1MEd LINE L1 811 1057 -5062 21 57 0 0 chr10 31328080 31328115 -108988650 + AT_rich Low_complexity Low_complexity 1 35 0 2283 108 16 0 chr10 31328116 31328421 -108988344 - AluSx SINE Alu -2 310 1 1063 172 0 0 chr10 31328472 31328635 -108988130 + AluJb SINE Alu 1 163 -149 478 200 0 0 chr10 31328637 31328722 -108988043 - FLAM_A SINE Alu -35 107 23 1921 223 21 13 chr10 31328729 31329199 -108987566 + L1MB4 LINE L1 4246 4719 -1427 1859 184 24 3 chr10 31329199 31329573 -108987192 + L1MB4 LINE L1 5797 6178 -2 1967 151 0 20 chr10 31330032 31330337 -108986428 + AluSx SINE Alu 1 299 -13 2182 217 93 74 chr10 31330338 31330871 -108985894 + L1MC4 LINE L1 7104 7662 -380 2208 97 0 72 chr10 31330871 31331191 -108985574 + AluSx SINE Alu 1 297 -15 2182 217 93 74 chr10 31331191 31331562 -108985203 + L1MC4 LINE L1 7662 8025 -17 24 32 0 0 chr10 31331670 31331701 -108985064 + AT_rich Low_complexity Low_complexity 1 31 0 385 271 28 9 chr10 31332104 31332211 -108984554 + L2 LINE L2 3197 3305 -8 207 300 0 0 chr10 31333187 31333247 -108983518 - L2 LINE L2 -559 2755 2696 261 98 0 0 chr10 31334074 31334115 -108982650 + (TAA)n Simple_repeat Simple_repeat 1 41 0 1499 154 96 32 chr10 31334467 31334747 -108982018 - AluJo SINE Alu -12 300 3 259 326 121 0 chr10 31335086 31335218 -108981547 - MIR3 SINE MIR -27 181 34 740 197 0 0 chr10 31335759 31335896 -108980869 + AluJo SINE Alu 1 137 -175 1518 185 27 20 chr10 31335896 31336188 -108980577 + AluJb SINE Alu 1 294 -18 275 230 68 0 chr10 31336332 31336406 -108980359 + MER116 DNA Mariner 1 79 -1 416 35 0 17 chr10 31336795 31336853 -108979912 - L1PA7 LINE L1 -3 6151 6095 2505 71 3 0 chr10 31336957 31337266 -108979499 + AluSx SINE Alu 1 310 -2 257 154 0 0 chr10 31339050 31339089 -108977676 + L2 LINE L2 3214 3252 -20 1988 142 3 16 chr10 31339178 31339481 -108977284 + AluSx SINE Alu 1 299 -13 467 258 38 15 chr10 31339512 31339644 -108977121 + L2 LINE L2 2956 3090 -223 2638 127 52 40 chr10 31339649 31340184 -108976581 + MER57B-int LTR ERV1 1018 3648 -4168 1659 136 11 0 chr10 31340169 31340448 -108976317 - MER41-int LTR ERV1 -3342 4195 3914 * 1661 130 0 8 chr10 31340446 31340708 -108976057 - MER41-int LTR ERV1 -2435 2580 2321 753 54 0 0 chr10 31340708 31340801 -108975964 - AluYa5/8 SINE Alu -16 294 202 1697 89 4 4 chr10 31340801 31341049 -108975716 - MER41-int LTR ERV1 -2868 3078 2831 568 92 51 31 chr10 31341033 31341131 -108975634 + MER57B-int LTR ERV1 4905 5004 -2533 * 12096 117 54 9 chr10 31341130 31341994 -108974771 + MER57B-int LTR ERV1 5249 6073 -1464 2322 105 3 0 chr10 31341994 31342299 -108974466 - AluSp SINE Alu -7 306 1 12096 117 54 9 chr10 31342299 31343254 -108973511 + MER57B-int LTR ERV1 6073 7150 -387 673 141 23 31 chr10 31343254 31343382 -108973383 + LTR54B LTR ERV1 5 131 -367 1643 78 122 0 chr10 31343383 31343613 -108973152 + MER57B-int LTR ERV1 7280 7537 0 2849 128 7 2 chr10 31343613 31344042 -108972723 + MER57B LTR ERV1 1 431 -3 1580 153 4 8 chr10 31344044 31344293 -108972472 + AluJo SINE Alu 50 297 -15 24 0 0 0 chr10 31344293 31344317 -108972448 + AT_rich Low_complexity Low_complexity 1 24 0 5548 202 20 21 chr10 31344366 31345431 -108971334 - L1MC1 LINE L1 -2 6331 5267 1720 186 3 3 chr10 31345431 31345722 -108971043 - AluJb SINE Alu -20 292 2 5548 202 20 21 chr10 31345722 31346922 -108969843 - L1MC1 LINE L1 -1066 5267 4071 429 200 22 0 chr10 31346920 31347010 -108969755 - L1M4 LINE L1 -1762 4384 4293 * 1889 182 3 6 chr10 31347043 31347356 -108969409 - AluJb SINE Alu 0 312 1 1500 297 84 45 chr10 31348083 31348750 -108968015 + HERV16 LTR ERVL 1585 2277 -2719 1054 144 0 0 chr10 31348818 31348978 -108967787 + FRAM SINE Alu 5 164 -2 2264 87 0 3 chr10 31348987 31349275 -108967490 + AluY SINE Alu 18 304 -7 198 281 0 16 chr10 31349445 31349509 -108967256 - L2 LINE L2 -4 3268 3206 916 179 0 31 chr10 31349867 31350029 -108966736 - FRAM SINE Alu -19 157 1 422 228 19 95 chr10 31351047 31351154 -108965611 + MIR SINE MIR 90 183 -79 1640 182 7 13 chr10 31351154 31351456 -108965309 + AluJo SINE Alu 1 300 -12 422 228 19 95 chr10 31351456 31351506 -108965259 + MIR SINE MIR 183 235 -27 7214 188 151 19 chr10 31352054 31353605 -108963160 - MER52A LTR ERV1 0 1755 1 1833 160 0 3 chr10 31353954 31354266 -108962499 + AluJb SINE Alu 1 311 0 744 187 27 13 chr10 31354883 31355033 -108961732 + FRAM SINE Alu 4 155 -21 1189 193 166 14 chr10 31355033 31355395 -108961370 - L1MC4 LINE L1 -738 7304 6888 349 232 128 16 chr10 31355759 31355884 -108960881 - L2 LINE L2 -4 3309 3171 2713 140 20 27 chr10 31356382 31356627 -108960138 + L1PB4 LINE L1 5708 5950 -206 1854 158 32 0 chr10 31356627 31356906 -108959859 + AluJb SINE Alu 3 290 -22 2713 140 20 27 chr10 31356906 31357109 -108959656 + L1PB4 LINE L1 5950 6153 -3 24 0 0 0 chr10 31357499 31357523 -108959242 + AT_rich Low_complexity Low_complexity 1 24 0 186 71 0 0 chr10 31357574 31357602 -108959163 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 258 263 25 0 chr10 31358201 31358281 -108958484 - MIR3 SINE MIR -33 175 94 548 233 47 31 chr10 31358708 31358837 -108957928 - MER20 DNA MER1_type -36 183 53 333 47 0 0 chr10 31358893 31358936 -108957829 + (CA)n Simple_repeat Simple_repeat 2 44 0 2103 111 0 80 chr10 31358936 31359124 -108957641 - AluSx SINE Alu -13 299 146 2333 97 0 3 chr10 31359124 31359424 -108957341 - AluSx SINE Alu -13 299 1 2103 111 0 80 chr10 31359424 31359560 -108957205 - AluSx SINE Alu -166 146 1 292 342 44 13 chr10 31359574 31359732 -108957033 - MIR SINE MIR -71 191 29 217 352 9 29 chr10 31359849 31359954 -108956811 + L3b LINE CR1 1479 1581 -2 2226 114 3 0 chr10 31360723 31361020 -108955745 + AluSx SINE Alu 1 298 -14 1921 145 0 40 chr10 31361941 31362265 -108954500 - AluJb SINE Alu -1 311 1 863 141 0 0 chr10 31362267 31362395 -108954370 - AluJo/FLAM SINE Alu -179 133 6 29 84 0 0 chr10 31362592 31362663 -108954102 + AT_rich Low_complexity Low_complexity 1 71 0 201 279 31 112 chr10 31362751 31362825 -108953940 - MIR3 SINE MIR -55 153 97 2790 119 47 9 chr10 31362825 31363255 -108953510 + MER83 LTR ERV1 3 448 0 201 279 31 112 chr10 31363255 31363341 -108953424 - MIR3 SINE MIR -111 97 6 1684 283 85 16 chr10 31363680 31363913 -108952852 + L2 LINE L2 1892 2107 -1207 1199 179 92 118 chr10 31363913 31364309 -108952456 + MER4C LTR ERV1 2 386 -79 351 0 0 0 chr10 31364309 31364348 -108952417 + (TG)n Simple_repeat Simple_repeat 2 40 0 1199 179 92 118 chr10 31364348 31364427 -108952338 + MER4C LTR ERV1 386 465 0 1684 283 85 16 chr10 31364427 31365030 -108951735 + L2 LINE L2 2107 2786 -528 532 258 14 83 chr10 31365407 31365624 -108951141 + L2 LINE L2 3112 3313 0 1452 249 75 22 chr10 31365829 31366283 -108950482 + MLT1F LTR MaLR 60 537 -5 270 260 60 30 chr10 31366311 31366411 -108950354 - MIR SINE MIR -108 154 52 192 97 0 0 chr10 31367665 31367696 -108949069 + (GA)n Simple_repeat Simple_repeat 2 32 0 187 360 8 32 chr10 31368796 31368921 -108947844 - MIR3 SINE MIR -21 187 66 272 359 0 0 chr10 31369514 31369620 -108947145 + L2 LINE L2 2266 2371 -943 191 261 0 0 chr10 31369651 31369697 -108947068 + L2 LINE L2 3221 3266 -6 2781 121 91 0 chr10 31369812 31370265 -108946500 + L1PB3 LINE L1 5660 6153 -1 2120 132 0 3 chr10 31370407 31370718 -108946047 - AluSx SINE Alu -2 310 1 1892 157 0 22 chr10 31370718 31371030 -108945735 - AluJb SINE Alu -6 306 1 318 218 129 10 chr10 31371105 31371206 -108945559 - MIR SINE MIR -56 206 94 944 101 0 0 chr10 31371397 31371516 -108945249 + FLAM_C SINE Alu 1 119 -24 465 103 28 28 chr10 31371516 31371623 -108945142 + (TA)n Simple_repeat Simple_repeat 2 108 0 24 53 0 0 chr10 31371641 31371679 -108945086 + AT_rich Low_complexity Low_complexity 1 38 0 304 236 297 0 chr10 31371829 31371977 -108944788 - MIR SINE MIR -54 208 17 1224 205 95 3 chr10 31372254 31372509 -108944256 + AluJo SINE Alu 1 286 -26 360 0 0 0 chr10 31372509 31372549 -108944216 + (CA)n Simple_repeat Simple_repeat 1 40 0 1224 205 95 3 chr10 31372549 31372576 -108944189 + AluJo SINE Alu 286 309 -3 225 0 0 0 chr10 31373317 31373342 -108943423 + (TA)n Simple_repeat Simple_repeat 2 26 0 2118 130 7 0 chr10 31373693 31373986 -108942779 + AluSx SINE Alu 1 295 -17 21 36 0 0 chr10 31374060 31374088 -108942677 + AT_rich Low_complexity Low_complexity 1 28 0 289 186 18 26 chr10 31374173 31374286 -108942479 + (TA)n Simple_repeat Simple_repeat 1 112 0 1814 161 3 0 chr10 31374286 31374572 -108942193 - AluJo SINE Alu -25 287 1 1700 208 25 11 chr10 31374615 31374980 -108941785 + MLT1A2 LTR MaLR 1 370 -4 2699 23 7 3 chr10 31375119 31375427 -108941338 - AluY SINE Alu -2 309 1 202 326 11 22 chr10 31375594 31375683 -108941082 + L2 LINE L2 3185 3272 0 340 323 46 32 chr10 31375703 31375881 -108940884 + MIR SINE MIR 5 184 -77 183 328 123 0 chr10 31377936 31378058 -108938707 - MIR SINE MIR -57 205 69 557 254 40 23 chr10 31378259 31378432 -108938333 - MIR SINE MIR -1 261 86 2298 107 0 7 chr10 31378976 31379286 -108937479 + AluSx SINE Alu 5 312 0 854 231 0 27 chr10 31380072 31380258 -108936507 + MER41D LTR ERV1 1 181 -376 6953 123 128 108 chr10 31380258 31381911 -108934854 - pTR5 LTR ERV1 -7 2431 745 1718 192 51 16 chr10 31381911 31382281 -108934484 + MER41D LTR ERV1 166 548 -9 1176 165 55 42 chr10 31382292 31382384 -108934381 - Tigger3(Golem) DNA MER2_type -2 3027 2938 2410 60 0 0 chr10 31382384 31382702 -108934063 + AluY SINE Alu 1 318 0 1176 165 55 42 chr10 31382702 31382844 -108933921 - Tigger3(Golem) DNA MER2_type -91 2938 2789 4256 53 23 5 chr10 31382855 31383458 -108933307 + Harlequin LTR ERV1 1961 2574 -4322 * 24575 110 11 16 chr10 31383457 31387018 -108929747 + Harlequin LTR ERV1 3352 6896 0 3940 42 38 0 chr10 31387018 31387490 -108929275 + LTR2B LTR ERV1 1 490 0 478 95 0 0 chr10 31387490 31387564 -108929201 + AluSc SINE Alu 236 309 0 672 219 44 15 chr10 31387564 31387701 -108929064 - Tigger3(Golem) DNA MER2_type -2888 141 1 1425 182 0 55 chr10 31387979 31388124 -108928641 + AluJo SINE Alu 1 122 -190 2115 115 21 0 chr10 31388124 31388411 -108928354 + AluSx SINE Alu 1 293 -19 1425 182 0 55 chr10 31388411 31388572 -108928193 + AluJo SINE Alu 122 290 -22 5043 154 26 20 chr10 31389307 31390221 -108926544 - MER49 LTR ERV1 -1 922 3 281 169 17 0 chr10 31390244 31390303 -108926462 + CT-rich Low_complexity Low_complexity 1 60 0 2029 137 7 3 chr10 31390303 31390602 -108926163 - AluSx SINE Alu -4 308 9 646 238 48 12 chr10 31390699 31390867 -108925898 - MER5A DNA MER1_type 0 189 16 823 259 50 27 chr10 31390872 31391169 -108925596 + LTR16A LTR ERVL 119 422 -28 3710 151 3 9 chr10 31391602 31391795 -108924970 - LTR39 LTR ERV1 0 783 591 1954 137 35 0 chr10 31391795 31392079 -108924686 + AluSx SINE Alu 2 295 -17 3710 151 3 9 chr10 31392079 31392467 -108924298 - LTR39 LTR ERV1 -192 591 205 926 70 160 26 chr10 31392468 31392624 -108924141 + L1PA8 LINE L1 5995 6171 -1 * 1803 229 47 16 chr10 31392623 31393132 -108923633 + L1ME3A LINE L1 5634 6162 -8 1569 193 58 20 chr10 31393356 31393704 -108923061 - MLT1A1 LTR MaLR -2 363 3 219 36 0 0 chr10 31393940 31393968 -108922797 + (CAGAGA)n Simple_repeat Simple_repeat 3 30 0 508 255 43 43 chr10 31394414 31394598 -108922167 + MIR3 SINE MIR 4 187 -21 1469 98 229 0 chr10 31394752 31394997 -108921768 + AluSx SINE Alu 1 301 -1 1162 206 31 103 chr10 31395064 31395293 -108921472 - MLT1B LTR MaLR -3 387 200 333 0 0 0 chr10 31395293 31395330 -108921435 + (TG)n Simple_repeat Simple_repeat 2 38 0 1162 206 31 103 chr10 31395330 31395517 -108921248 - MLT1B LTR MaLR -190 200 1 1931 150 0 34 chr10 31396069 31396389 -108920376 + AluJb SINE Alu 1 309 -3 2641 241 88 20 chr10 31396798 31397117 -108919648 - L1ME3A LINE L1 -6 6164 5868 1400 135 8 45 chr10 31397117 31397361 -108919404 + MER46A DNA MER2_type 2 236 0 2641 241 88 20 chr10 31397361 31397855 -108918910 - L1ME3A LINE L1 -302 5868 5295 3267 87 93 10 chr10 31397900 31398392 -108918373 - L1PA11 LINE L1 0 6174 5642 853 150 7 21 chr10 31398418 31398558 -108918207 + AluJo SINE Alu 1 138 -174 1733 113 0 0 chr10 31398578 31398799 -108917966 - AluSg/x SINE Alu -20 290 70 308 215 0 25 chr10 31399365 31399444 -108917321 + L2 LINE L2 3163 3239 -74 300 227 31 10 chr10 31400178 31400275 -108916490 + (TA)n Simple_repeat Simple_repeat 2 100 0 261 0 0 0 chr10 31400277 31400306 -108916459 + (TG)n Simple_repeat Simple_repeat 2 30 0 2028 140 0 25 chr10 31400393 31400708 -108916057 - AluSx SINE Alu -3 309 3 207 0 0 0 chr10 31402625 31402648 -108914117 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 222 37 0 0 chr10 31404211 31404238 -108912527 + (CA)n Simple_repeat Simple_repeat 2 28 0 3652 155 38 41 chr10 31404934 31405663 -108911102 - LTR8A LTR ERV1 0 727 1 2040 173 12 46 chr10 31406013 31406423 -108910342 - MSTD LTR MaLR 0 396 1 413 296 64 54 chr10 31406775 31406978 -108909787 + MIR SINE MIR 34 238 -24 213 174 43 0 chr10 31407299 31407345 -108909420 + (TTAG)n Simple_repeat Simple_repeat 2 49 0 416 203 83 124 chr10 31408199 31408440 -108908325 - L2 LINE L2 -1 3312 3082 23 0 0 0 chr10 31408907 31408930 -108907835 + AT_rich Low_complexity Low_complexity 1 23 0 815 157 0 8 chr10 31408930 31409064 -108907701 - FLAM_C SINE Alu 0 133 1 21 0 0 0 chr10 31409571 31409592 -108907173 + AT_rich Low_complexity Low_complexity 1 21 0 1175 149 0 0 chr10 31409690 31409858 -108906907 - AluSx SINE Alu -11 299 132 13445 54 6 0 chr10 31409858 31412289 -108904476 - L1PA6 LINE L1 -2 6152 3718 5388 157 37 30 chr10 31412290 31413263 -108903502 - L1P LINE L1 -5153 993 14 753 167 71 0 chr10 31413263 31413389 -108903376 - AluSx SINE Alu -177 136 2 365 162 0 14 chr10 31413398 31413472 -108903293 + (TG)n Simple_repeat Simple_repeat 2 74 0 306 179 0 0 chr10 31413472 31413528 -108903237 + L1MC4 LINE L1 6648 6703 -1339 422 91 13 0 chr10 31413664 31413741 -108903024 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 334 347 59 6 chr10 31413838 31414008 -108902757 - MIR3 SINE MIR -5 203 25 2060 145 0 16 chr10 31414351 31414668 -108902097 + AluJb SINE Alu 1 312 0 186 319 83 0 chr10 31416156 31416228 -108900537 - L2 LINE L2 -44 3228 3151 763 132 0 0 chr10 31416363 31416477 -108900288 - L1MB3 LINE L1 -242 5941 5828 1262 202 19 0 chr10 31416494 31416751 -108900014 + L1MD3 LINE L1 7577 7838 -157 313 304 97 23 chr10 31417434 31417669 -108899096 - MIR SINE MIR -10 252 2 375 23 0 0 chr10 31418209 31418253 -108898512 + (CA)n Simple_repeat Simple_repeat 1 44 0 2123 134 3 0 chr10 31418986 31419285 -108897480 - AluSx SINE Alu -12 300 1 675 174 0 33 chr10 31419302 31419423 -108897342 - FLAM_C SINE Alu -17 126 10 183 372 16 33 chr10 31419561 31419682 -108897083 + MIR SINE MIR 26 144 -118 375 262 85 6 chr10 31421841 31422005 -108894760 + MIR SINE MIR 86 262 0 1645 132 12 103 chr10 31422752 31423071 -108893694 - AluJb SINE Alu -22 290 1 206 216 273 0 chr10 31423312 31423400 -108893365 - MIR SINE MIR 0 262 151 376 291 29 34 chr10 31423800 31423862 -108892903 + MER5B DNA MER1_type 1 62 -116 1696 164 51 7 chr10 31423862 31424155 -108892610 + AluJo SINE Alu 1 306 -6 376 291 29 34 chr10 31424155 31424267 -108892498 + MER5B DNA MER1_type 62 174 -4 401 222 8 34 chr10 31424740 31424857 -108891908 - MER5B DNA MER1_type -61 117 4 574 202 0 20 chr10 31425008 31425207 -108891558 + CT-rich Low_complexity Low_complexity 1 194 0 1378 176 42 93 chr10 31425263 31425419 -108891346 - MER96B DNA MER1_type? -5 412 250 1958 142 3 56 chr10 31425419 31425742 -108891023 + AluSq SINE Alu 1 306 -7 1378 176 42 93 chr10 31425742 31425993 -108890772 - MER96B DNA MER1_type? -167 250 26 1913 142 0 0 chr10 31426972 31427247 -108889518 + AluJo SINE Alu 1 275 -37 928 210 125 67 chr10 31427268 31427659 -108889106 + LTR37B LTR ERV1 51 464 -4 1554 145 105 14 chr10 31427832 31428108 -108888657 - AluJo SINE Alu -11 301 1 543 251 41 12 chr10 31428355 31428526 -108888239 - MER5B DNA MER1_type 0 178 3 23 0 0 0 chr10 31428886 31428909 -108887856 + AT_rich Low_complexity Low_complexity 1 23 0 231 173 0 0 chr10 31429010 31429062 -108887703 + C-rich Low_complexity Low_complexity 1 52 0 956 174 0 18 chr10 31429963 31430130 -108886635 - FRAM SINE Alu -15 161 1 362 333 104 9 chr10 31430132 31430363 -108886402 - MIR SINE MIR -2 260 8 385 293 79 45 chr10 31430706 31430907 -108885858 + L1ME4a LINE L1 5736 5950 -171 1771 174 3 19 chr10 31430907 31431223 -108885542 + AluJo SINE Alu 1 311 -1 385 293 79 45 chr10 31431223 31431287 -108885478 + L1ME4a LINE L1 5950 6010 -111 1945 138 17 3 chr10 31432061 31432351 -108884414 - AluJo SINE Alu -15 297 4 2088 103 3 23 chr10 31432362 31432697 -108884068 - AluSx SINE Alu 0 312 1 204 346 68 0 chr10 31433060 31433193 -108883572 + MIR SINE MIR 65 206 -56 1566 138 57 8 chr10 31433302 31433549 -108883216 - AluJo SINE Alu -23 289 31 285 269 67 42 chr10 31433553 31433672 -108883093 - L2 LINE L2 -11 3302 3181 1594 91 59 18 chr10 31435426 31435647 -108881118 + MER30 DNA MER1_type 1 230 0 799 185 0 0 chr10 31435787 31435906 -108880859 - FLAM_C SINE Alu -23 120 2 1886 108 73 0 chr10 31435968 31436227 -108880538 - AluSx SINE Alu -32 280 3 1881 160 3 0 chr10 31438129 31438422 -108878343 + AluJo SINE Alu 1 294 -18 2244 128 0 0 chr10 31438566 31438878 -108877887 - AluSx SINE Alu 0 312 1 1762 158 17 20 chr10 31438946 31439243 -108877522 - AluJb SINE Alu -16 296 1 258 216 0 0 chr10 31439310 31439361 -108877404 - MER117 DNA MER1_type -78 119 69 590 285 144 30 chr10 31439409 31439813 -108876952 - LTR16A LTR ERVL 0 450 1 230 0 0 32 chr10 31439879 31439910 -108876855 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 989 299 29 8 chr10 31439940 31440315 -108876450 + L1ME4a LINE L1 5495 5877 -244 273 170 0 0 chr10 31440360 31440407 -108876358 - MER3 DNA MER1_type -9 200 154 2384 176 54 45 chr10 31440413 31440771 -108875994 + L1MA9 LINE L1 5752 6105 -207 1891 149 4 0 chr10 31440771 31441046 -108875719 + AluSx SINE Alu 1 276 -36 2384 176 54 45 chr10 31441046 31441094 -108875671 + L1MA9 LINE L1 6105 6151 -161 321 26 0 0 chr10 31441094 31441132 -108875633 + (CA)n Simple_repeat Simple_repeat 1 38 0 2384 176 54 45 chr10 31441132 31441280 -108875485 + L1MA9 LINE L1 6151 6312 0 700 211 0 78 chr10 31441293 31441345 -108875420 - MER3 DNA MER1_type 4 166 112 2865 10 0 0 chr10 31441345 31441656 -108875109 - AluYa5 SINE Alu 0 311 1 700 211 0 78 chr10 31441656 31441783 -108874982 - MER3 DNA MER1_type -50 112 1 209 276 48 9 chr10 31442362 31442467 -108874298 - MIR SINE MIR -14 248 140 26 50 0 0 chr10 31442595 31442635 -108874130 + AT_rich Low_complexity Low_complexity 1 40 0 251 209 30 15 chr10 31443692 31443759 -108873006 + (TATG)n Simple_repeat Simple_repeat 3 70 0 974 111 0 22 chr10 31443864 31443999 -108872766 + FLAM_C SINE Alu 1 132 -1 2072 294 110 24 chr10 31444429 31445116 -108871649 + L1MEc LINE L1 49 676 -5720 4185 130 7 0 chr10 31445116 31445714 -108871051 + LTR43 LTR ERV1 1 602 0 2072 294 110 24 chr10 31445714 31446426 -108870339 + L1MEc LINE L1 676 1568 -4828 1786 146 24 28 chr10 31446434 31446539 -108870226 + AluJb SINE Alu 1 105 -207 2587 122 5 19 chr10 31446539 31446908 -108869857 - THE1B LTR MaLR 0 364 1 1786 146 24 28 chr10 31446908 31447089 -108869676 + AluJb SINE Alu 105 286 -26 2202 215 44 47 chr10 31447104 31447803 -108868962 + L1MEc LINE L1 1577 2273 -4123 907 207 23 0 chr10 31447836 31448010 -108868755 + MER58A DNA MER1_type 43 220 -4 1820 258 60 26 chr10 31448011 31448608 -108868157 + L1MEc LINE L1 2225 2847 -3368 3923 121 4 9 chr10 31448608 31449138 -108867627 + MER1A DNA MER1_type 1 527 0 1820 258 60 26 chr10 31449138 31449194 -108867571 + L1MEc LINE L1 2847 2900 -3315 1592 257 20 20 chr10 31449195 31449359 -108867406 - HAL1 LINE L1 -674 1833 1670 1007 332 45 22 chr10 31449359 31449868 -108866897 + LTR33 LTR ERVL 1 521 0 1592 257 20 20 chr10 31449868 31450159 -108866606 - HAL1 LINE L1 -836 1671 1378 543 195 0 0 chr10 31450168 31450255 -108866510 - Tigger7 DNA MER2_type -11 2476 2390 1464 230 0 4 chr10 31450261 31450522 -108866243 - Tigger7 DNA MER2_type -473 260 1 2667 261 95 51 chr10 31450540 31451558 -108865207 - HAL1 LINE L1 -1165 1342 370 189 0 0 0 chr10 31451558 31451579 -108865186 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2667 261 95 51 chr10 31451579 31451799 -108864966 - HAL1 LINE L1 -2137 370 44 2203 230 68 30 chr10 31451799 31452399 -108864366 - MLT1E2 LTR MaLR -1 625 3 2667 261 95 51 chr10 31452399 31452443 -108864322 - HAL1 LINE L1 -2463 44 3 534 325 45 29 chr10 31452475 31452783 -108863982 + L3 LINE CR1 1136 1448 -129 1508 180 71 19 chr10 31452866 31453188 -108863577 + MER44D DNA MER2_type 1 609 0 644 198 33 0 chr10 31453289 31453410 -108863355 - L2 LINE L2 -1 3312 3188 201 376 58 31 chr10 31453697 31453923 -108862842 + L2 LINE L2 2822 3053 -219 2314 113 0 3 chr10 31453923 31454234 -108862531 - AluSx SINE Alu -2 310 1 1387 153 57 66 chr10 31454501 31454848 -108861917 + AluJo SINE Alu 13 356 0 2849 138 5 25 chr10 31456441 31456882 -108859883 + Tigger2a DNA MER2_type 3 434 0 2124 132 0 0 chr10 31457063 31457366 -108859399 - AluSg SINE Alu -7 303 1 869 238 47 0 chr10 31457952 31458145 -108858620 + MER58A DNA MER1_type 23 224 0 1905 167 0 6 chr10 31458206 31458518 -108858247 + AluJo SINE Alu 1 310 -2 1150 247 120 8 chr10 31459124 31459598 -108857167 - Charlie7 DNA MER1_type 0 2612 2086 630 239 174 13 chr10 31459598 31459828 -108856937 - L1MC/D LINE L1 -1990 5818 5552 350 313 20 0 chr10 31459842 31459992 -108856773 - L1MC/D LINE L1 -2318 5490 5338 7436 214 94 57 chr10 31460111 31462846 -108853919 + L1MC3 LINE L1 4283 7240 -545 408 229 36 0 chr10 31462846 31462929 -108853836 + MLT1F1 LTR MaLR 45 130 -437 7436 214 94 57 chr10 31462929 31463478 -108853287 + L1MC3 LINE L1 7240 7767 -18 784 246 87 4 chr10 31463479 31463731 -108853034 - Charlie7 DNA MER1_type -898 1714 1442 1068 190 41 37 chr10 31464097 31464366 -108852399 - L1MB5 LINE L1 -1 6173 5904 507 263 62 39 chr10 31464372 31464551 -108852214 + MER5A DNA MER1_type 1 183 -6 1186 203 60 56 chr10 31465754 31466020 -108850745 + AluJo SINE Alu 1 267 -45 21 36 0 0 chr10 31466041 31466069 -108850696 + AT_rich Low_complexity Low_complexity 1 28 0 233 259 17 0 chr10 31466231 31466289 -108850476 + MIR SINE MIR 203 261 -1 225 180 0 0 chr10 31466964 31467014 -108849751 + (TG)n Simple_repeat Simple_repeat 1 50 0 201 224 20 41 chr10 31467804 31467853 -108848912 - MIR3 SINE MIR -51 157 110 2508 149 45 12 chr10 31468226 31468452 -108848313 - Tigger2 DNA MER2_type 0 2718 2501 1942 156 13 3 chr10 31468452 31468759 -108848006 + AluJb SINE Alu 1 310 -2 2508 149 45 12 chr10 31468759 31468955 -108847810 - Tigger2 DNA MER2_type -217 2501 2282 359 209 0 0 chr10 31468957 31469024 -108847741 - Tigger2 DNA MER2_type -2651 67 1 4124 98 11 21 chr10 31471465 31471650 -108845115 + MER41A LTR ERV1 1 186 -368 2383 96 0 3 chr10 31471650 31471963 -108844802 + AluSx SINE Alu 1 312 0 4124 98 11 21 chr10 31471963 31472337 -108844428 + MER41A LTR ERV1 186 554 0 260 363 14 14 chr10 31472478 31472624 -108844141 + MER5A DNA MER1_type 7 152 -37 2269 65 0 21 chr10 31472751 31473068 -108843697 - AluY SINE Alu 0 311 1 2094 132 3 0 chr10 31473233 31473528 -108843237 + AluSx SINE Alu 1 296 -16 28 0 0 0 chr10 31473629 31473657 -108843108 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr10 31473897 31473920 -108842845 + AT_rich Low_complexity Low_complexity 1 23 0 1136 197 94 23 chr10 31474106 31474572 -108842193 + MLT1E LTR MaLR 1 593 0 450 275 60 71 chr10 31474594 31475040 -108841725 - L1MEd LINE L1 -1032 1458 924 213 39 0 0 chr10 31475181 31475207 -108841558 + (TG)n Simple_repeat Simple_repeat 1 26 0 1931 173 76 6 chr10 31475840 31476181 -108840584 - MLT1A1 LTR MaLR 0 365 1 490 339 39 26 chr10 31476499 31476729 -108840036 + MIR SINE MIR 30 262 0 1681 245 60 23 chr10 31476830 31477311 -108839454 + MLT2B1 LTR ERVL 3 501 -19 300 50 25 0 chr10 31477333 31477373 -108839392 + MLT2B1 LTR ERVL 469 509 -6 2410 80 0 3 chr10 31479154 31479456 -108837309 - AluSg SINE Alu -9 301 1 1889 163 3 0 chr10 31479543 31479837 -108836928 + AluJo SINE Alu 1 295 -17 210 91 0 0 chr10 31480973 31481006 -108835759 + (CA)n Simple_repeat Simple_repeat 2 34 0 2227 92 3 3 chr10 31481639 31481922 -108834843 - AluSp SINE Alu -30 283 1 2250 108 0 0 chr10 31481922 31482218 -108834547 - AluSg1 SINE Alu -13 296 1 2684 55 3 0 chr10 31482760 31483090 -108833675 - L1PA13 LINE L1 -18 6145 5815 1274 109 0 0 chr10 31483095 31483260 -108833505 - AluSg/x SINE Alu -21 291 127 2300 112 0 0 chr10 31483262 31483574 -108833191 - AluSx SINE Alu 0 312 1 2242 83 13 0 chr10 31483576 31483877 -108832888 - L1PA12 LINE L1 -340 5828 5524 203 336 71 9 chr10 31484114 31484227 -108832538 + L2 LINE L2 3148 3267 -5 547 146 22 29 chr10 31484558 31484695 -108832070 + CT-rich Low_complexity Low_complexity 4 139 0 1029 104 0 33 chr10 31484781 31484964 -108831801 + (TTTC)n Simple_repeat Simple_repeat 1 177 0 1708 162 59 4 chr10 31485982 31486254 -108830511 + AluJo SINE Alu 1 287 -25 1765 146 79 0 chr10 31486858 31487125 -108829640 - AluJo SINE Alu -24 288 1 2332 103 0 0 chr10 31487142 31487444 -108829321 + AluSg SINE Alu 1 302 -8 256 343 0 0 chr10 31487450 31487523 -108829242 - L2 LINE L2 -32 3240 3168 597 237 51 32 chr10 31487542 31487795 -108828970 - L1ME4a LINE L1 -210 5911 5654 319 252 59 115 chr10 31488724 31488856 -108827909 - L1ME4a LINE L1 -568 5553 5415 1613 190 3 14 chr10 31488856 31489140 -108827625 - AluJo SINE Alu -30 282 2 319 252 59 115 chr10 31489140 31489256 -108827509 - L1ME4a LINE L1 -706 5415 5294 230 0 33 0 chr10 31489256 31489286 -108827479 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 396 0 0 0 chr10 31489285 31489329 -108827436 + (TG)n Simple_repeat Simple_repeat 1 44 0 319 252 59 115 chr10 31489286 31489349 -108827416 - L1ME4a LINE L1 -826 5295 5299 349 318 105 14 chr10 31489446 31489742 -108827023 - L1ME4a LINE L1 -1083 5063 4741 182 37 37 0 chr10 31491381 31491408 -108825357 + (CAAAAA)n Simple_repeat Simple_repeat 1 28 0 718 154 39 23 chr10 31492785 31492915 -108823850 - FLAM_C SINE Alu -10 133 2 212 196 0 22 chr10 31493481 31493527 -108823238 + CT-rich Low_complexity Low_complexity 3 47 0 751 161 9 34 chr10 31493581 31493811 -108822954 + CT-rich Low_complexity Low_complexity 1 224 0 1675 209 0 0 chr10 31495302 31495584 -108821181 - AluJo SINE Alu -30 282 1 196 229 29 29 chr10 31496322 31496392 -108820373 - L3 LINE CR1 -3 1574 1505 2425 140 56 12 chr10 31497875 31498283 -108818482 - MSTB LTR MaLR 0 426 1 21 0 0 0 chr10 31498979 31499000 -108817765 + AT_rich Low_complexity Low_complexity 1 21 0 2284 100 0 0 chr10 31499074 31499365 -108817400 - AluSx SINE Alu -21 291 1 1475 107 0 15 chr10 31499947 31500153 -108816612 - AluSg/x SINE Alu -11 299 97 790 245 169 8 chr10 31500837 31501146 -108815619 + L1ME2 LINE L1 5681 6052 -112 289 97 0 0 chr10 31501150 31501201 -108815564 + FLAM_A SINE Alu 84 119 -14 245 178 46 11 chr10 31501203 31501377 -108815388 + (TA)n Simple_repeat Simple_repeat 1 180 0 1489 234 3 3 chr10 31501397 31501683 -108815082 - AluJo SINE Alu -26 286 1 232 231 205 0 chr10 31501683 31501761 -108815004 + L1ME3 LINE L1 6039 6132 -30 282 238 42 7 chr10 31501765 31501937 -108814828 + (TA)n Simple_repeat Simple_repeat 1 178 0 190 286 0 0 chr10 31501970 31502019 -108814746 - MIR SINE MIR -7 255 207 180 0 0 0 chr10 31504354 31504374 -108812391 + (T)n Simple_repeat Simple_repeat 1 20 0 1035 159 13 94 chr10 31504839 31505072 -108811693 - MER20 DNA MER1_type -2 217 4 213 200 0 0 chr10 31505567 31505612 -108811153 + G-rich Low_complexity Low_complexity 1 45 0 251 91 0 0 chr10 31505961 31505994 -108810771 + (TTCCC)n Simple_repeat Simple_repeat 4 36 0 485 167 56 19 chr10 31505994 31506156 -108810609 + CT-rich Low_complexity Low_complexity 1 168 0 479 189 0 21 chr10 31506156 31506251 -108810514 - AluJ/FRAM SINE Alu -3 309 217 683 171 8 0 chr10 31506280 31506397 -108810368 - FLAM_C SINE Alu -15 118 1 323 227 21 31 chr10 31508115 31508212 -108808553 + MIR SINE MIR 6 101 -161 1026 165 24 0 chr10 31508226 31508390 -108808375 - FRAM SINE Alu -16 160 1 188 340 106 0 chr10 31508402 31508496 -108808269 + MIR SINE MIR 144 247 -15 564 148 0 137 chr10 31509381 31509564 -108807201 - Charlie5 DNA MER1_type -84 2528 2371 2331 98 0 9 chr10 31510873 31511188 -108805577 + AluSq SINE Alu 1 312 -1 27 0 0 0 chr10 31511294 31511321 -108805444 + AT_rich Low_complexity Low_complexity 1 27 0 327 298 10 10 chr10 31511725 31511846 -108804919 + MIR SINE MIR 32 153 -55 320 348 130 0 chr10 31511846 31512076 -108804689 + MIR SINE MIR 3 262 0 2118 122 10 26 chr10 31512091 31512403 -108804362 - AluSx SINE Alu -5 307 1 236 75 0 25 chr10 31512787 31512827 -108803938 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 2216 118 7 0 chr10 31513170 31513467 -108803298 - AluSg SINE Alu -11 299 1 2206 124 0 9 chr10 31513672 31513987 -108802778 - AluSx SINE Alu 0 312 1 378 236 231 36 chr10 31514473 31514668 -108802097 - L1MC/D LINE L1 -497 5624 5521 1639 175 0 22 chr10 31515185 31515499 -108801266 - AluJo SINE Alu 0 312 6 497 213 0 0 chr10 31515533 31515613 -108801152 - AluJ/FLAM SINE Alu -230 82 3 262 271 0 0 chr10 31516567 31516626 -108800139 - L2 LINE L2 -9 3263 3205 288 335 150 21 chr10 31517168 31517502 -108799263 - L2 LINE L2 -1001 2313 1937 180 0 0 0 chr10 31517719 31517739 -108799026 + (TTTTTA)n Simple_repeat Simple_repeat 2 21 0 940 114 0 66 chr10 31519892 31520059 -108796706 + AluJb SINE Alu 154 309 -3 180 0 0 0 chr10 31520180 31520200 -108796565 + (TAAAAA)n Simple_repeat Simple_repeat 2 21 0 2050 141 79 50 chr10 31520362 31520781 -108795984 + MSTB1 LTR MaLR 2 432 0 319 308 22 75 chr10 31522682 31522909 -108793856 - MIR SINE MIR -25 237 23 1748 199 0 6 chr10 31524689 31525001 -108791764 - AluJb SINE Alu -2 310 1 206 310 26 9 chr10 31525482 31525598 -108791167 - L2 LINE L2 -638 2676 2559 677 219 71 120 chr10 31525883 31526208 -108790557 + L1MD2 LINE L1 5869 6177 -182 1206 164 220 12 chr10 31526220 31526470 -108790295 - AluJb SINE Alu 0 302 1 1298 169 12 0 chr10 31526830 31527072 -108789693 + L1MB4 LINE L1 5935 6179 -1 2494 125 117 5 chr10 31527639 31528024 -108788741 - MSTA LTR MaLR 0 428 1 675 253 66 48 chr10 31528614 31528887 -108787878 - L1ME4a LINE L1 -242 5879 5602 210 255 184 31 chr10 31530123 31530221 -108786544 + L2 LINE L2 3190 3302 -11 838 288 9 4 chr10 31530276 31530509 -108786256 - MIR SINE MIR 0 262 29 21 0 0 0 chr10 31530754 31530775 -108785990 + AT_rich Low_complexity Low_complexity 1 21 0 201 318 0 0 chr10 31530799 31530862 -108785903 + (CATATA)n Simple_repeat Simple_repeat 1 63 0 1295 271 61 76 chr10 31530862 31531170 -108785595 - L1MC4 LINE L1 -128 7914 7603 1536 101 128 130 chr10 31531170 31531546 -108785219 - THE1C LTR MaLR 0 375 1 1295 271 61 76 chr10 31531546 31531975 -108784790 - L1MC4 LINE L1 -439 7603 7188 948 133 95 0 chr10 31532598 31532756 -108784009 + FRAM SINE Alu 1 172 -4 2284 86 0 7 chr10 31533946 31534247 -108782518 - AluY SINE Alu -12 299 1 227 277 102 106 chr10 31534517 31534752 -108782013 - L2 LINE L2 -36 3236 3003 1595 179 69 135 chr10 31534766 31535301 -108781464 - MLT2B1 LTR ERVL 0 520 21 186 143 0 0 chr10 31535393 31535428 -108781337 + (CA)n Simple_repeat Simple_repeat 2 36 0 674 280 75 10 chr10 31536076 31536276 -108780489 - MIR SINE MIR -4 258 46 408 156 0 0 chr10 31536284 31536348 -108780417 + AluS SINE Alu 229 292 -18 1395 232 14 0 chr10 31536372 31536661 -108780104 + AluJb SINE Alu 1 293 -19 242 279 59 0 chr10 31536694 31536762 -108780003 + MIR SINE MIR 34 105 -157 24 0 0 0 chr10 31537148 31537172 -108779593 + AT_rich Low_complexity Low_complexity 1 24 0 360 289 12 52 chr10 31537700 31537789 -108778976 - MIR SINE MIR -17 245 165 2459 231 72 4 chr10 31537789 31538303 -108778462 - MLT1H LTR MaLR 0 549 1 360 289 12 52 chr10 31538303 31538386 -108778379 - MIR SINE MIR -97 165 80 338 165 113 30 chr10 31539075 31539208 -108777557 + L1ME4a LINE L1 5976 6119 -2 185 259 74 0 chr10 31539722 31539776 -108776989 - L3 LINE CR1 -138 1439 1382 327 349 41 30 chr10 31539890 31540059 -108776706 + L2 LINE L2 3102 3272 0 213 39 0 0 chr10 31540607 31540633 -108776132 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1835 148 21 0 chr10 31540637 31540920 -108775845 - AluJo SINE Alu -23 289 1 655 305 162 11 chr10 31541359 31541730 -108775035 - L3 LINE CR1 -72 1505 1079 1409 195 3 78 chr10 31542348 31542682 -108774083 + AluJo SINE Alu 1 309 -3 217 331 73 53 chr10 31543971 31544122 -108772643 + MIR3 SINE MIR 32 185 -23 379 169 0 0 chr10 31544238 31544297 -108772468 + polypyrimidine Low_complexity Low_complexity 2 60 0 666 209 6 16 chr10 31544298 31544480 -108772285 + CT-rich Low_complexity Low_complexity 1 180 0 1437 213 30 16 chr10 31544483 31544788 -108771977 - AluJo SINE Alu -3 309 1 228 205 31 58 chr10 31545868 31545950 -108770815 - MIR SINE MIR -66 142 61 679 134 0 9 chr10 31546712 31546824 -108769941 + FLAM_C SINE Alu 32 142 -1 236 134 60 90 chr10 31546874 31546941 -108769824 + L1MC4 LINE L1 7923 7987 -55 449 202 64 0 chr10 31546949 31547043 -108769722 - MLT1B LTR MaLR 0 390 291 823 181 7 40 chr10 31547187 31547336 -108769429 + FRAM SINE Alu 1 144 -32 1933 162 27 15 chr10 31548616 31548949 -108767816 - MER44D DNA MER2_type -1 608 2 1225 236 18 60 chr10 31548956 31549078 -108767687 - MLT1A2 LTR MaLR -2 372 246 1881 141 0 72 chr10 31549078 31549412 -108767353 - AluJo SINE Alu -2 310 1 1225 236 18 60 chr10 31549412 31549674 -108767091 - MLT1A2 LTR MaLR -128 246 4 234 186 47 81 chr10 31550536 31550622 -108766143 - MIR SINE MIR -52 210 128 423 346 6 19 chr10 31551559 31551715 -108765050 + MIR3 SINE MIR 52 205 -3 2007 221 10 25 chr10 31552487 31552889 -108763876 - MSTD LTR MaLR 0 396 1 182 300 0 62 chr10 31553000 31553080 -108763685 + MIR SINE MIR 80 154 -108 801 180 4 132 chr10 31553239 31553467 -108763298 + MER20 DNA MER1_type 2 200 -19 2399 84 0 13 chr10 31553556 31553865 -108762900 - AluSg SINE Alu -5 305 1 1415 158 57 4 chr10 31553880 31554126 -108762639 - AluJo SINE Alu -30 282 24 904 231 160 12 chr10 31554303 31554794 -108761971 + LTR50 LTR ERVL 52 731 -64 1590 205 3 3 chr10 31554794 31555082 -108761683 - AluJo SINE Alu -24 288 1 904 231 160 12 chr10 31555082 31555159 -108761606 + LTR50 LTR ERVL 731 795 0 228 167 0 0 chr10 31555613 31555661 -108761104 + (TG)n Simple_repeat Simple_repeat 1 48 0 27 29 0 0 chr10 31555843 31555877 -108760888 + AT_rich Low_complexity Low_complexity 1 34 0 219 170 0 0 chr10 31556873 31556920 -108759845 + (TG)n Simple_repeat Simple_repeat 1 47 0 578 174 35 0 chr10 31557019 31557134 -108759631 + L1M4 LINE L1 4145 4263 -1883 1072 208 51 55 chr10 31557625 31557844 -108758921 + MLT1A1 LTR MaLR 1 219 -146 1482 188 0 8 chr10 31557844 31558099 -108758666 + AluJo SINE Alu 35 287 -25 215 31 31 0 chr10 31558104 31558136 -108758629 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 1072 208 51 55 chr10 31558136 31558343 -108758422 + MLT1A1 LTR MaLR 223 365 0 22 35 0 0 chr10 31558960 31558989 -108757776 + AT_rich Low_complexity Low_complexity 1 29 0 2334 153 9 3 chr10 31559020 31559366 -108757399 - MER7A DNA MER2_type 0 346 1 193 343 157 10 chr10 31559387 31559489 -108757276 - MIR SINE MIR -76 132 16 667 254 30 12 chr10 31559976 31560145 -108756620 - MER5B DNA MER1_type -4 174 3 900 210 11 6 chr10 31560159 31560335 -108756430 - MER5B DNA MER1_type -1 177 1 307 299 287 0 chr10 31560663 31560830 -108755935 - MIR SINE MIR 0 262 48 360 58 29 43 chr10 31562265 31562334 -108754431 + (TTTC)n Simple_repeat Simple_repeat 2 69 0 2899 130 7 31 chr10 31562446 31562891 -108753874 + MER57B LTR ERV1 1 434 0 384 40 0 0 chr10 31563644 31563694 -108753071 + (CA)n Simple_repeat Simple_repeat 2 51 0 34 42 0 0 chr10 31563882 31563930 -108752835 + AT_rich Low_complexity Low_complexity 1 48 0 713 272 58 73 chr10 31564030 31564494 -108752271 + LTR16A LTR ERVL 1 450 0 3861 153 14 16 chr10 31564671 31565306 -108751459 + L1PA16 LINE L1 5520 6153 -13 32 0 0 0 chr10 31565893 31565925 -108750840 + AT_rich Low_complexity Low_complexity 1 32 0 1743 177 3 25 chr10 31566547 31566863 -108749902 + AluJo SINE Alu 1 309 -3 224 254 51 0 chr10 31567272 31567331 -108749434 + L2 LINE L2 3211 3272 0 562 167 0 67 chr10 31567359 31567479 -108749286 + FLAM_C SINE Alu 2 113 -30 3844 125 12 4 chr10 31568486 31569048 -108747717 - L1PB3 LINE L1 -3 6151 5585 455 340 34 10 chr10 31569053 31569259 -108747506 - MIR SINE MIR -50 212 2 439 322 20 7 chr10 31570718 31570864 -108745901 - MIR SINE MIR -97 165 18 26 50 0 0 chr10 31570889 31570929 -108745836 + AT_rich Low_complexity Low_complexity 1 40 0 3918 88 27 8 chr10 31570945 31571471 -108745294 - L1PA10 LINE L1 -1 6167 5632 277 299 35 0 chr10 31571730 31571817 -108744948 + MIR SINE MIR 67 156 -106 320 125 4 2 chr10 31571817 31572073 -108744692 + AluSx SINE Alu 1 298 -2 205 364 45 0 chr10 31572603 31572691 -108744074 + MIR SINE MIR 81 172 -90 2264 103 3 0 chr10 31572747 31573047 -108743718 + AluSx SINE Alu 1 301 -11 248 267 221 0 chr10 31573100 31573186 -108743579 + L2 LINE L2 3166 3270 -2 1854 121 452 11 chr10 31573306 31573746 -108743019 + MER51A LTR ERV1 1 634 0 596 135 31 0 chr10 31573887 31573983 -108742782 - L1MD1 LINE L1 0 6242 6144 1718 196 3 3 chr10 31573985 31574307 -108742458 - L1MD1 LINE L1 -267 5975 5654 267 217 116 14 chr10 31574307 31574376 -108742389 + MLT1J1 LTR MaLR 347 422 -24 539 153 73 56 chr10 31574508 31574660 -108742105 - MIR SINE MIR -2 260 103 1695 151 15 11 chr10 31574697 31574968 -108741797 + THE1B LTR MaLR 93 364 0 300 194 21 21 chr10 31574968 31575061 -108741704 - L1MCc LINE L1 -5058 2064 1972 6607 131 70 37 chr10 31575067 31575786 -108740979 + Tigger3b DNA MER2_type 2 777 -2251 4498 112 41 2 chr10 31575786 31576402 -108740363 + LTR9B LTR ERV1 5 644 0 6607 131 70 37 chr10 31576402 31576872 -108739893 + Tigger3b DNA MER2_type 777 1230 -1 2477 75 0 7 chr10 31576893 31577201 -108739564 + AluY SINE Alu 1 306 -5 273 266 0 0 chr10 31577239 31577303 -108739462 + CT-rich Low_complexity Low_complexity 1 64 0 758 261 70 40 chr10 31577309 31577581 -108739184 - L1M4 LINE L1 -2076 4070 3791 2049 263 97 13 chr10 31577581 31578128 -108738637 + MLT1E LTR MaLR 1 593 0 1135 272 262 15 chr10 31578135 31578613 -108738152 + MLT1E-int LTR MaLR 9 627 -744 643 283 21 16 chr10 31578815 31579006 -108737759 + MLT1E-int LTR MaLR 692 883 -488 935 235 77 98 chr10 31579117 31579534 -108737231 + MLT1E-int LTR MaLR 964 1371 0 1041 278 35 82 chr10 31579542 31579751 -108737014 + MLT1E LTR MaLR 37 219 -374 2271 136 0 0 chr10 31579751 31580061 -108736704 + AluSx SINE Alu 1 310 -2 1041 278 35 82 chr10 31580061 31580254 -108736511 + MLT1E LTR MaLR 219 420 -173 821 201 23 23 chr10 31580264 31580438 -108736327 + MLT1E LTR MaLR 1 174 -331 4589 274 67 30 chr10 31580441 31581856 -108734909 - L1MEc LINE L1 -4317 2079 569 1647 204 73 14 chr10 31581856 31582224 -108734541 + MLT1B LTR MaLR 1 390 0 4589 274 67 30 chr10 31582224 31582776 -108733989 - L1MEc LINE L1 -5827 569 39 748 284 69 8 chr10 31582778 31583185 -108733580 - L1MCc LINE L1 -4887 1536 1129 377 344 13 7 chr10 31583589 31583740 -108733025 - L1MCc LINE L1 -6009 414 263 191 294 0 0 chr10 31583987 31584038 -108732727 - L3 LINE CR1 -3 1574 1524 200 203 0 54 chr10 31584395 31584469 -108732296 + T-rich Low_complexity Low_complexity 2 71 0 851 134 0 15 chr10 31584627 31584761 -108732004 + AluSg/x SINE Alu 178 309 -1 340 330 106 37 chr10 31584805 31585023 -108731742 - MIR SINE MIR -7 255 23 4142 102 86 3 chr10 31585261 31585856 -108730909 + LTR9B LTR ERV1 1 644 0 663 207 67 16 chr10 31585960 31586153 -108730612 + L1ME2 LINE L1 5953 6155 -9 246 81 0 0 chr10 31586157 31586194 -108730571 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1483 196 7 18 chr10 31586197 31586473 -108730292 - AluJo SINE Alu -30 282 10 387 0 0 0 chr10 31586493 31586536 -108730229 + (CA)n Simple_repeat Simple_repeat 2 44 0 2224 105 0 0 chr10 31586544 31586830 -108729935 - AluSc SINE Alu -23 286 1 443 159 30 50 chr10 31588051 31588189 -108728576 + MER51A LTR ERV1 1 136 -241 288 105 0 53 chr10 31588203 31588260 -108728505 + MER51B LTR ERV1 109 162 -215 * 1722 121 40 62 chr10 31588252 31588350 -108728415 + MER51B LTR ERV1 63 162 -215 2088 121 7 0 chr10 31588350 31588647 -108728118 + AluSx SINE Alu 1 299 -13 1722 121 40 62 chr10 31588647 31588870 -108727895 + MER51B LTR ERV1 162 377 0 261 83 0 0 chr10 31589118 31589154 -108727611 + (T)n Simple_repeat Simple_repeat 1 36 0 182 327 0 0 chr10 31591312 31591364 -108725401 + MIR3 SINE MIR 151 202 -6 1876 137 0 34 chr10 31591397 31591690 -108725075 + AluSq SINE Alu 1 283 -30 2138 98 3 0 chr10 31592884 31593171 -108723594 + AluSq SINE Alu 23 310 -3 546 256 83 24 chr10 31593290 31593458 -108723307 + MIR SINE MIR 11 188 -74 409 240 10 30 chr10 31593882 31593982 -108722783 + MER5A DNA MER1_type 9 106 -83 1524 198 35 35 chr10 31594015 31594383 -108722382 + MLT1A2 LTR MaLR 7 374 0 390 74 0 0 chr10 31594413 31594467 -108722298 - MADE1 DNA Mariner -26 54 1 417 186 93 0 chr10 31595945 31596042 -108720723 + MER5A DNA MER1_type 4 109 -80 482 117 0 0 chr10 31596069 31596129 -108720636 + AluJ/FRAM SINE Alu 226 285 -27 323 320 51 115 chr10 31597081 31597315 -108719450 + MIR SINE MIR 19 237 -25 2128 130 0 0 chr10 31598429 31598729 -108718036 + AluSx SINE Alu 1 300 -12 615 339 77 57 chr10 31599250 31599603 -108717162 + L3 LINE CR1 227 594 -983 2162 119 0 7 chr10 31599603 31599898 -108716867 - AluSq SINE Alu -18 295 3 615 339 77 57 chr10 31599898 31600051 -108716714 + L3 LINE CR1 594 743 -834 750 233 31 13 chr10 31600679 31600838 -108715927 + FRAM SINE Alu 3 164 -2 271 243 54 0 chr10 31600948 31601022 -108715743 + L2 LINE L2 2897 2974 -298 1486 184 4 23 chr10 31601389 31601650 -108715115 + AluJo SINE Alu 1 256 -56 247 318 97 45 chr10 31601951 31602105 -108714660 + MIR3 SINE MIR 40 201 -7 2596 80 18 108 chr10 31602247 31602647 -108714118 - THE1B LTR MaLR 0 364 1 2443 67 0 3 chr10 31602915 31603213 -108713552 + AluY SINE Alu 1 297 -14 180 286 191 12 chr10 31603218 31603302 -108713463 - L2 LINE L2 -22 3250 3152 480 258 100 57 chr10 31603618 31603817 -108712948 + MIR SINE MIR 32 250 -12 324 259 124 45 chr10 31603973 31604351 -108712414 - LTR33 LTR ERVL -19 502 24 3770 127 79 99 chr10 31604576 31605377 -108711388 - LTR1 LTR ERV1 0 785 1 1928 129 0 4 chr10 31606894 31607165 -108709600 + AluSx SINE Alu 12 281 -31 22 0 0 0 chr10 31608620 31608642 -108708123 + AT_rich Low_complexity Low_complexity 1 22 0 1743 184 0 0 chr10 31608827 31609135 -108707630 + AluJo SINE Alu 1 308 0 23 33 0 0 chr10 31610255 31610285 -108706480 + AT_rich Low_complexity Low_complexity 1 30 0 241 259 138 16 chr10 31610350 31610444 -108706321 + MIR SINE MIR 98 200 -62 1038 223 105 119 chr10 31610704 31611125 -108705640 + MLT1G LTR MaLR 12 424 -166 1945 132 0 3 chr10 31611125 31611421 -108705344 + L1MA6 LINE L1 6006 6300 0 1038 223 105 119 chr10 31611421 31611578 -108705187 + MLT1G LTR MaLR 424 582 -8 196 380 0 14 chr10 31611731 31611802 -108704963 + MIR SINE MIR 28 97 -165 282 282 0 0 chr10 31612034 31612105 -108704660 + MIR SINE MIR 172 242 -20 1860 149 7 19 chr10 31612895 31613203 -108703562 - AluJo SINE Alu -8 304 1 437 222 254 22 chr10 31613537 31613722 -108703043 + MIR SINE MIR 30 257 -5 231 331 92 35 chr10 31613728 31613870 -108702895 - MIR SINE MIR -95 167 18 2017 130 0 3 chr10 31613979 31614292 -108702473 + AluSx SINE Alu 1 312 0 240 163 0 0 chr10 31614541 31614584 -108702181 + A-rich Low_complexity Low_complexity 1 43 0 2172 130 0 0 chr10 31616709 31617008 -108699757 + AluSx SINE Alu 1 299 -13 1472 103 121 52 chr10 31617749 31618021 -108698744 + AluSx SINE Alu 1 291 -21 1454 194 3 35 chr10 31618506 31618789 -108697976 + AluJo SINE Alu 33 306 -6 1710 139 161 60 chr10 31619308 31619363 -108697402 - MER4A LTR ERV1 0 664 616 2421 106 0 0 chr10 31619363 31619675 -108697090 + AluSx SINE Alu 1 312 0 1710 139 161 60 chr10 31619675 31619985 -108696780 - MER4A LTR ERV1 -48 616 262 561 96 32 21 chr10 31619988 31620082 -108696683 - MER4A LTR ERV1 -569 95 1 322 194 9 9 chr10 31620947 31621055 -108695710 + GA-rich Low_complexity Low_complexity 1 108 0 352 283 158 26 chr10 31621236 31621388 -108695377 - MER5A DNA MER1_type 0 189 18 2371 86 6 13 chr10 31621536 31621850 -108694915 - AluSx SINE Alu 0 312 1 1507 178 48 7 chr10 31621876 31622247 -108694518 + AluJo SINE Alu 2 383 0 2467 63 7 0 chr10 31622333 31622635 -108694130 + AluY SINE Alu 1 304 -7 220 258 24 97 chr10 31622979 31623103 -108693662 - MIR SINE MIR -64 144 30 1715 168 40 23 chr10 31623423 31623727 -108693038 - AluJo SINE Alu -3 309 1 476 259 0 30 chr10 31623727 31623858 -108692907 - MIR SINE MIR -38 224 98 1389 277 138 31 chr10 31623869 31623925 -108692840 - MLT1G1 LTR MaLR -5 590 541 2428 72 0 3 chr10 31623925 31624218 -108692547 + AluSc SINE Alu 1 292 -17 1389 277 138 31 chr10 31624218 31624681 -108692084 - MLT1G1 LTR MaLR -54 541 15 228 294 88 0 chr10 31624705 31624773 -108691992 - MIR SINE MIR -175 87 14 709 142 126 24 chr10 31624986 31625113 -108691652 + FLAM_C SINE Alu 3 142 -1 289 343 20 10 chr10 31625125 31625224 -108691541 - MER5A DNA MER1_type -5 184 85 1795 155 17 31 chr10 31625230 31625521 -108691244 + AluJo SINE Alu 1 287 -25 213 341 22 22 chr10 31625536 31625627 -108691138 - MER5A DNA MER1_type -92 97 7 787 287 141 52 chr10 31625635 31626130 -108690635 + LTR67 LTR ERVL 5 543 -14 1547 157 80 0 chr10 31626289 31626563 -108690202 - AluJo SINE Alu -16 296 1 2533 40 7 0 chr10 31626624 31626920 -108689845 - AluY SINE Alu -13 298 1 664 223 0 8 chr10 31627138 31627259 -108689506 + FLAM_A SINE Alu 2 121 -12 2369 104 0 0 chr10 31627771 31628102 -108688663 - AluSx SINE Alu 0 312 1 1384 222 300 3 chr10 31628234 31628847 -108687918 + LTR50 LTR ERVL 1 795 0 718 213 0 16 chr10 31629001 31629128 -108687637 + FLAM_C SINE Alu 2 126 -17 478 275 8 22 chr10 31629773 31630009 -108686756 + L1MDa LINE L1 1259 1499 -5031 932 231 17 54 chr10 31630112 31630410 -108686355 + L1MA9 LINE L1 5996 6282 -30 2156 122 0 0 chr10 31630500 31630812 -108685953 - AluSx SINE Alu 0 312 1 432 300 58 32 chr10 31631059 31631249 -108685516 - MIR SINE MIR -15 247 53 1646 164 47 89 chr10 31631834 31632285 -108684480 - MSTB1 LTR MaLR 0 432 1 584 320 144 19 chr10 31632649 31632961 -108683804 + L2 LINE L2 2959 3309 -4 282 95 0 0 chr10 31634679 31634721 -108682044 + (CA)n Simple_repeat Simple_repeat 1 42 0 198 0 0 0 chr10 31634720 31634742 -108682023 + (GA)n Simple_repeat Simple_repeat 2 23 0 * 222 318 45 11 chr10 31635044 31635132 -108681633 + L2 LINE L2 3182 3272 -41 334 279 27 36 chr10 31635254 31635365 -108681400 + L1MC4 LINE L1 6596 6705 -1337 * 360 236 67 22 chr10 31635295 31635384 -108681381 - L1MC4 LINE L1 -1337 6705 6613 345 162 73 0 chr10 31635361 31635429 -108681336 - L1MCa LINE L1 -4359 2067 1995 * 186 103 0 0 chr10 31635429 31635458 -108681307 + (GA)n Simple_repeat Simple_repeat 2 30 0 1496 187 3 7 chr10 31635460 31635743 -108681022 - AluJo SINE Alu -30 282 1 501 303 77 0 chr10 31635906 31636061 -108680704 + MIR SINE MIR 81 247 -15 222 254 73 0 chr10 31636758 31636813 -108679952 - L2 LINE L2 0 3272 3214 245 333 178 17 chr10 31636822 31637002 -108679763 - L2 LINE L2 -1254 2060 1852 244 254 28 0 chr10 31639010 31639081 -108677684 + L2 LINE L2 3201 3273 -40 753 253 178 18 chr10 31639275 31639663 -108677102 + MLT1J2 LTR MaLR 1 450 0 253 253 53 0 chr10 31640040 31640115 -108676650 + A-rich Low_complexity Low_complexity 4 82 0 2216 88 14 0 chr10 31640833 31641130 -108675635 - AluSc SINE Alu -7 302 2 188 283 11 76 chr10 31641758 31641850 -108674915 + MIR SINE MIR 174 259 -3 499 278 89 30 chr10 31642325 31642494 -108674271 - L2 LINE L2 0 3313 3135 578 215 5 126 chr10 31644180 31644371 -108672394 + MLT1A1 LTR MaLR 198 365 0 1556 165 11 37 chr10 31644506 31644779 -108671986 - MLT1A1 LTR MaLR 0 365 100 2361 70 0 0 chr10 31646093 31646392 -108670373 - AluY SINE Alu -12 299 1 264 170 64 32 chr10 31646995 31647089 -108669676 - MER113 DNA MER1_type? -405 116 20 192 262 28 65 chr10 31647209 31647316 -108669449 + MER5A DNA MER1_type 66 168 -21 1541 151 33 15 chr10 31647752 31648047 -108668718 + AluJo SINE Alu 7 306 0 196 346 77 15 chr10 31648111 31648241 -108668524 - L2 LINE L2 0 3313 3176 252 0 0 0 chr10 31648777 31648805 -108667960 + (CA)n Simple_repeat Simple_repeat 1 28 0 5082 133 30 6 chr10 31648838 31649642 -108667123 + L1PA16 LINE L1 5344 6166 0 229 71 0 0 chr10 31649649 31649677 -108667088 + AluSp SINE Alu 7 34 -268 1764 77 6 144 chr10 31649677 31650003 -108666762 + AluSp SINE Alu 18 298 -15 405 58 0 0 chr10 31650085 31650137 -108666628 + (TG)n Simple_repeat Simple_repeat 1 52 0 720 308 21 17 chr10 31650671 31650905 -108665860 - MIR SINE MIR 0 262 28 5079 131 8 24 chr10 31651271 31652067 -108664698 + LTR39 LTR ERV1 1 783 0 2206 109 0 0 chr10 31652234 31652538 -108664227 + AluSg SINE Alu 1 304 -6 208 360 31 31 chr10 31652815 31652976 -108663789 - L2 LINE L2 -35 3278 3118 2395 171 17 21 chr10 31653097 31653297 -108663468 + MSTB LTR MaLR 1 200 -226 2131 113 3 0 chr10 31653297 31653606 -108663159 + AluSx SINE Alu 1 310 -2 2395 171 17 21 chr10 31653606 31653825 -108662940 + MSTB LTR MaLR 200 418 -8 1189 198 85 26 chr10 31654386 31654837 -108661928 + MLT1E LTR MaLR 3 557 -31 1641 108 0 9 chr10 31654867 31655098 -108661667 - AluSx SINE Alu -83 229 1 320 225 11 0 chr10 31657235 31657324 -108659441 + GA-rich Low_complexity Low_complexity 1 90 0 639 174 35 99 chr10 31657347 31657418 -108659347 - MLT1A2 LTR MaLR -213 161 87 2418 66 7 0 chr10 31657418 31657721 -108659044 + AluY SINE Alu 1 305 -6 639 174 35 99 chr10 31657721 31657821 -108658944 - MLT1A2 LTR MaLR -287 87 1 1835 286 14 16 chr10 31657824 31658446 -108658319 - L2 LINE L2 -2004 1310 690 1840 201 36 25 chr10 31658447 31658885 -108657880 + LTR37B LTR ERV1 7 449 -19 1978 134 20 0 chr10 31658886 31659191 -108657574 - AluSx SINE Alu -1 311 1 1261 276 57 36 chr10 31659225 31659316 -108657449 - L2 LINE L2 -2618 696 608 2234 96 3 0 chr10 31659316 31659619 -108657146 + AluSx SINE Alu 1 304 -8 1261 276 57 36 chr10 31659619 31659947 -108656818 - L2 LINE L2 -2706 608 268 551 128 10 78 chr10 31660039 31660138 -108656627 + MLT1B LTR MaLR 1 92 -298 1316 192 60 91 chr10 31660138 31660513 -108656252 - MLT1A1 LTR MaLR -2 426 1 1020 184 148 41 chr10 31660514 31660574 -108656191 + MLT1B LTR MaLR 91 143 -247 2191 96 0 0 chr10 31660574 31660867 -108655898 - AluSq SINE Alu -20 293 1 1020 184 148 41 chr10 31660867 31661077 -108655688 + MLT1B LTR MaLR 143 390 0 286 29 0 0 chr10 31661372 31661407 -108655358 - MADE1 DNA Mariner -1 79 45 2167 109 0 3 chr10 31662147 31662458 -108654307 + AluSx SINE Alu 1 310 -2 2386 116 48 60 chr10 31662973 31663195 -108653570 - MSTC LTR MaLR 0 428 205 2074 131 0 3 chr10 31663195 31663507 -108653258 - AluSx SINE Alu -1 311 1 2386 116 48 60 chr10 31663507 31663616 -108653149 - MSTC LTR MaLR -223 205 101 2204 116 3 0 chr10 31663616 31663927 -108652838 - AluSx SINE Alu 0 312 1 2386 116 48 60 chr10 31663927 31664027 -108652738 - MSTC LTR MaLR -327 101 1 213 265 0 0 chr10 31665272 31665321 -108651444 + (GGCTG)n Simple_repeat Simple_repeat 5 53 0 182 301 0 81 chr10 31666315 31666438 -108650327 - L2 LINE L2 -2420 894 782 26 30 0 0 chr10 31666966 31666999 -108649766 + AT_rich Low_complexity Low_complexity 1 33 0 1668 175 0 16 chr10 31667002 31667305 -108649460 - AluJo SINE Alu -14 298 1 2313 108 36 28 chr10 31667717 31668078 -108648687 + THE1B LTR MaLR 1 364 0 181 313 94 0 chr10 31669653 31669717 -108647048 + MIR SINE MIR 118 187 -75 2060 119 0 0 chr10 31669745 31670030 -108646735 + AluSg SINE Alu 9 293 -17 22 56 0 0 chr10 31670388 31670424 -108646341 + AT_rich Low_complexity Low_complexity 1 36 0 572 296 74 40 chr10 31670563 31670860 -108645905 - L2 LINE L2 -2 3311 3005 297 128 0 0 chr10 31670958 31671005 -108645760 + (CA)n Simple_repeat Simple_repeat 2 48 0 863 130 0 0 chr10 31671336 31671459 -108645306 + FRAM SINE Alu 30 152 -24 1336 75 0 0 chr10 31671739 31671913 -108644852 - L1MA1 LINE L1 0 6302 6129 1839 117 0 83 chr10 31672870 31673195 -108643570 + AluSq SINE Alu 1 298 -15 192 313 0 0 chr10 31673443 31673507 -108643258 + MIR SINE MIR 132 195 -67 2229 100 3 0 chr10 31673517 31673827 -108642938 - AluSx SINE Alu -1 311 1 310 223 0 29 chr10 31673850 31673953 -108642812 + CT-rich Low_complexity Low_complexity 2 101 0 249 204 0 0 chr10 31674129 31674173 -108642592 - AluJ/monomer SINE Alu -257 44 1 335 172 0 0 chr10 31674193 31674251 -108642514 - MER63 DNA MER1_type -96 740 683 1667 176 36 0 chr10 31674605 31674906 -108641859 + AluJb SINE Alu 1 312 0 414 210 227 0 chr10 31675014 31675133 -108641632 - MIR SINE MIR -66 196 51 1639 174 23 7 chr10 31675636 31675941 -108640824 - AluJb SINE Alu 0 312 3 309 260 19 67 chr10 31676135 31676239 -108640526 + MIR SINE MIR 64 162 -46 533 260 78 13 chr10 31676936 31677090 -108639675 - L2 LINE L2 0 3313 3150 1773 271 41 36 chr10 31677163 31677241 -108639524 + MER69 DNA AcHobo 18 94 -1132 405 0 0 0 chr10 31677241 31677286 -108639479 + (CA)n Simple_repeat Simple_repeat 2 46 0 1769 153 7 0 chr10 31677288 31677575 -108639190 - AluJo SINE Alu -23 289 1 1773 271 41 36 chr10 31677575 31677777 -108638988 + MER69 DNA AcHobo 94 293 -933 180 0 0 0 chr10 31677777 31677797 -108638968 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2286 86 3 0 chr10 31677799 31678101 -108638664 - AluSp SINE Alu -10 303 1 1773 271 41 36 chr10 31678101 31678399 -108638366 + MER69 DNA AcHobo 293 606 -620 1078 226 137 30 chr10 31678405 31678450 -108638315 + MER69 DNA AcHobo 2035 2074 -452 2293 94 0 0 chr10 31678450 31678747 -108638018 - AluSq SINE Alu -16 297 1 1078 226 137 30 chr10 31678747 31679138 -108637627 + MER69 DNA AcHobo 2074 2518 -8 2093 107 0 19 chr10 31679616 31679925 -108636840 - AluSx SINE Alu -9 303 1 660 224 65 34 chr10 31680125 31680410 -108636355 - L1ME LINE L1 -299 5822 5539 2139 109 10 0 chr10 31681573 31681867 -108634898 - AluSx SINE Alu -15 297 1 591 272 54 33 chr10 31682333 31682517 -108634248 - MIR SINE MIR -11 251 64 2175 112 7 0 chr10 31684065 31684359 -108632406 - AluSx SINE Alu -16 296 1 267 264 114 43 chr10 31686317 31686457 -108630308 - L2 LINE L2 0 3313 3164 3463 70 16 0 chr10 31686798 31687244 -108629521 - MLT2A2 LTR ERVL 0 453 1 4048 135 65 7 chr10 31687814 31688540 -108628225 - L1PA16 LINE L1 -2 6164 5397 577 293 52 28 chr10 31688763 31689012 -108627753 + L3 LINE CR1 1307 1561 -16 180 0 0 0 chr10 31689012 31689032 -108627733 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 1219 168 9 40 chr10 31689050 31689276 -108627489 - AluJo SINE Alu -50 262 44 213 0 81 0 chr10 31690498 31690535 -108626230 + T-rich Low_complexity Low_complexity 1 40 0 957 37 11 68 chr10 31690535 31690726 -108626039 + (TTTTA)n Simple_repeat Simple_repeat 1 180 0 2165 88 3 3 chr10 31690728 31691011 -108625754 - AluSg SINE Alu -21 289 7 1345 164 8 131 chr10 31691123 31691520 -108625245 + MER7A DNA MER2_type 1 346 0 361 225 28 0 chr10 31691617 31691688 -108625077 + MER7A DNA MER2_type 274 346 0 25 23 0 23 chr10 31691701 31691722 -108625043 + AT_rich Low_complexity Low_complexity 1 21 -21 2258 87 0 3 chr10 31691722 31692008 -108624757 - AluSq SINE Alu -28 285 1 25 23 0 23 chr10 31692008 31692029 -108624736 + AT_rich Low_complexity Low_complexity 21 42 0 264 280 0 30 chr10 31692082 31692214 -108624551 - L1ME LINE L1 -267 5854 5727 340 319 150 19 chr10 31692234 31692447 -108624318 - L1ME LINE L1 -2253 5555 5315 4228 21 0 0 chr10 31692468 31692954 -108623811 - L1PA3 LINE L1 -4 6151 5666 340 113 0 0 chr10 31693068 31693121 -108623644 + Alu SINE Alu 243 295 -7 2315 84 0 0 chr10 31693176 31693473 -108623292 - AluY SINE Alu -14 297 1 186 358 0 37 chr10 31693534 31693615 -108623150 - L2 LINE L2 -94 3219 3142 1000 167 0 0 chr10 31693707 31693869 -108622896 + AluJb SINE Alu 148 309 -3 1101 207 31 102 chr10 31694344 31694398 -108622367 + MLT1A1 LTR MaLR 1 57 -308 1957 158 0 16 chr10 31694398 31694714 -108622051 + AluJo SINE Alu 1 311 -1 1101 207 31 102 chr10 31694714 31695040 -108621725 + MLT1A1 LTR MaLR 57 354 -11 743 231 20 20 chr10 31695271 31695466 -108621299 + MER63A DNA MER1_type 1 195 -15 445 296 75 55 chr10 31696052 31696519 -108620246 - L2 LINE L2 -76 3237 2749 204 232 20 121 chr10 31696587 31696643 -108620122 + MER5A DNA MER1_type 80 123 -66 2228 112 3 0 chr10 31696643 31696948 -108619817 - AluSc SINE Alu -3 306 1 204 232 20 121 chr10 31696948 31696990 -108619775 + MER5A DNA MER1_type 123 168 -21 1152 230 89 11 chr10 31696990 31697177 -108619588 - MLT1B LTR MaLR 0 390 219 333 0 0 0 chr10 31697177 31697214 -108619551 + (GA)n Simple_repeat Simple_repeat 2 38 0 1152 230 89 11 chr10 31697214 31697387 -108619378 - MLT1B LTR MaLR -171 219 2 578 245 48 69 chr10 31697425 31697613 -108619152 - MER5A DNA MER1_type -3 186 3 1373 142 15 0 chr10 31697900 31698104 -108618661 - AluSx SINE Alu -105 207 1 202 209 0 83 chr10 31698688 31698736 -108618029 + L2 LINE L2 3217 3301 -12 1649 167 3 21 chr10 31698894 31699039 -108617726 - AluJo SINE Alu -30 282 136 207 0 0 0 chr10 31699039 31699062 -108617703 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 1924 137 4 7 chr10 31699064 31699341 -108617424 - AluSx SINE Alu -36 276 1 1649 167 3 21 chr10 31699341 31699479 -108617286 - AluJo SINE Alu -177 135 1 201 39 0 0 chr10 31700396 31700422 -108616343 + (A)n Simple_repeat Simple_repeat 1 26 0 21 36 0 0 chr10 31700632 31700660 -108616105 + AT_rich Low_complexity Low_complexity 1 28 0 1900 125 3 34 chr10 31700879 31701175 -108615590 + AluJb SINE Alu 22 308 -4 2400 171 42 11 chr10 31701523 31701974 -108614791 - MER70A LTR ERVL -7 465 1 2194 155 5 19 chr10 31702672 31703039 -108613726 - THE1B LTR MaLR 0 364 3 1772 204 25 6 chr10 31703556 31703914 -108612851 - MLT1A1 LTR MaLR 0 365 1 454 293 39 10 chr10 31704062 31704267 -108612498 - L1MC/D LINE L1 -2059 5749 5539 552 281 55 79 chr10 31704359 31704779 -108611986 - L1MC/D LINE L1 -760 5386 4977 180 0 0 0 chr10 31704800 31704820 -108611945 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 502 263 29 88 chr10 31704837 31705062 -108611703 - L1MC/D LINE L1 -1519 4627 4419 1975 148 13 20 chr10 31705062 31705365 -108611400 - AluJb SINE Alu -11 301 1 502 263 29 88 chr10 31705365 31705413 -108611352 - L1MC/D LINE L1 -1727 4419 4370 1843 182 21 3 chr10 31705601 31705931 -108610834 + MER1B DNA MER1_type 2 337 0 328 384 9 22 chr10 31705974 31706001 -108610764 - L1MC/D LINE L1 -1975 4171 4145 218 32 32 0 chr10 31706001 31706032 -108610733 + (TG)n Simple_repeat Simple_repeat 1 32 0 328 384 9 22 chr10 31706032 31706228 -108610537 - L1MC/D LINE L1 -2001 4145 3951 2390 75 0 13 chr10 31706296 31706604 -108610161 + AluSx SINE Alu 1 304 -8 6151 132 37 6 chr10 31706652 31708170 -108608595 - L1MA6 LINE L1 -5 6295 4721 4593 98 9 2 chr10 31708326 31708971 -108607794 - L1PA11 LINE L1 -2 6172 5523 21 0 0 0 chr10 31709036 31709057 -108607708 + AT_rich Low_complexity Low_complexity 1 21 0 2297 85 10 13 chr10 31709216 31709521 -108607244 - AluY SINE Alu -7 304 1 976 325 84 36 chr10 31709521 31710275 -108606490 - L1MC/D LINE L1 -2838 3308 2519 3897 204 94 46 chr10 31710647 31711911 -108604854 - L1M4 LINE L1 -1218 4928 3604 233 139 26 43 chr10 31712065 31712141 -108604624 + CT-rich Low_complexity Low_complexity 1 74 0 22 35 0 0 chr10 31712828 31712857 -108603908 + AT_rich Low_complexity Low_complexity 1 29 0 368 284 105 36 chr10 31713081 31713528 -108603237 - HAL1 LINE L1 -947 1560 1083 611 282 167 8 chr10 31713536 31713788 -108602977 - L2 LINE L2 -7 3306 3015 3859 88 2 33 chr10 31714427 31714997 -108601768 + L1PB1 LINE L1 5597 6148 -3 562 285 120 37 chr10 31715268 31715643 -108601122 - MLT1J2 LTR MaLR -44 406 1 386 300 106 12 chr10 31716619 31716789 -108599976 + MIR SINE MIR 67 252 -10 208 377 23 31 chr10 31717540 31717670 -108599095 + MIR3 SINE MIR 3 131 -77 1572 191 0 4 chr10 31717957 31718213 -108598552 - AluJo SINE Alu -56 256 2 542 283 75 42 chr10 31719022 31719330 -108597435 + L1MD2 LINE L1 22 339 -6201 1721 230 95 66 chr10 31719460 31720429 -108596336 + L1MD2 LINE L1 876 1870 -4670 * 6436 235 46 33 chr10 31720417 31722686 -108594079 + L1MD2 LINE L1 3292 5529 -1224 1892 92 56 39 chr10 31722686 31722991 -108593774 + AluY SINE Alu 1 310 -1 6436 235 46 33 chr10 31722991 31723923 -108592842 + L1MD2 LINE L1 5529 6538 -215 237 65 0 0 chr10 31723923 31723954 -108592811 + (CA)n Simple_repeat Simple_repeat 2 32 0 6436 235 46 33 chr10 31723954 31724160 -108592605 + L1MD2 LINE L1 6538 6740 -13 1518 189 4 0 chr10 31724183 31724448 -108592317 + AluJo SINE Alu 36 301 -11 325 313 134 30 chr10 31726885 31727019 -108589746 + MER5B DNA MER1_type 30 177 -1 314 275 11 33 chr10 31727352 31727443 -108589322 - MIR SINE MIR -3 259 171 2057 105 66 12 chr10 31727456 31727991 -108588774 - MER51A LTR ERV1 0 634 1 556 288 41 0 chr10 31727991 31728161 -108588604 - MIR SINE MIR -84 178 2 2160 110 3 13 chr10 31728825 31729124 -108587641 + AluSx SINE Alu 1 296 -16 274 158 0 0 chr10 31730780 31730837 -108585928 - L1MB2 LINE L1 0 6171 6115 1896 128 4 4 chr10 31730837 31731110 -108585655 - AluSx SINE Alu -39 273 1 234 267 99 30 chr10 31731443 31731544 -108585221 - MLT1L LTR MaLR -137 478 371 1856 112 8 0 chr10 31731643 31731892 -108584873 + AluSx SINE Alu 1 251 -61 1415 103 0 0 chr10 31732190 31732375 -108584390 - AluSg/x SINE Alu -5 305 121 1517 52 0 0 chr10 31732379 31732553 -108584212 - SVA Other Other 0 1386 1213 832 228 0 10 chr10 31732588 31732794 -108583971 - SVA Other Other -915 471 268 2322 98 7 0 chr10 31732937 31733232 -108583533 - AluSx SINE Alu -15 297 1 195 294 209 25 chr10 31733418 31733581 -108583184 + MIR3 SINE MIR 16 208 0 454 260 35 46 chr10 31733615 31733788 -108582977 - L2 LINE L2 -2 3311 3141 2176 96 3 3 chr10 31734557 31734862 -108581903 + AluY SINE Alu 1 305 0 432 0 0 0 chr10 31735177 31735225 -108581540 + (CA)n Simple_repeat Simple_repeat 2 49 0 292 286 6 11 chr10 31735249 31735424 -108581341 + (TA)n Simple_repeat Simple_repeat 1 174 0 187 202 18 0 chr10 31735474 31735588 -108581177 + (TA)n Simple_repeat Simple_repeat 1 116 0 318 217 0 0 chr10 31735605 31735771 -108580994 + (TA)n Simple_repeat Simple_repeat 1 166 0 1313 205 4 16 chr10 31735785 31735902 -108580863 - AluJo SINE Alu -61 251 134 249 33 0 0 chr10 31735902 31735932 -108580833 + (TA)n Simple_repeat Simple_repeat 2 31 0 1313 205 4 16 chr10 31735932 31736068 -108580697 - AluJo SINE Alu -178 134 1 1968 143 55 25 chr10 31736728 31737092 -108579673 - THE1C LTR MaLR 0 375 1 2134 99 0 14 chr10 31738475 31738757 -108578008 - AluSx SINE Alu -9 303 26 1859 172 0 10 chr10 31738779 31739082 -108577683 - AluJo SINE Alu -12 300 1 789 224 0 42 chr10 31740121 31740313 -108576452 + MER58B DNA MER1_type 157 340 -1 921 175 0 85 chr10 31740323 31740413 -108576352 - MER3 DNA MER1_type -1 208 112 1945 113 4 4 chr10 31740413 31740678 -108576087 + AluSq SINE Alu 1 265 -48 224 30 30 0 chr10 31740687 31740720 -108576045 + (TA)n Simple_repeat Simple_repeat 1 34 0 * 225 0 0 0 chr10 31740719 31740744 -108576021 + (CA)n Simple_repeat Simple_repeat 2 26 0 921 175 0 85 chr10 31740720 31740854 -108575911 - MER3 DNA MER1_type -105 104 16 1313 152 212 8 chr10 31741445 31741695 -108575070 - AluJb SINE Alu -11 301 1 398 210 12 12 chr10 31742116 31742197 -108574568 - MLT1J2 LTR MaLR -348 102 22 1714 112 4 0 chr10 31742295 31742528 -108574237 - AluSq SINE Alu -46 267 34 6534 119 163 96 chr10 31742595 31744186 -108572579 - pTR5 LTR ERV1 0 2438 741 2374 82 0 3 chr10 31746492 31746785 -108569980 + AluY SINE Alu 1 292 -19 256 239 57 0 chr10 31747222 31747310 -108569455 + L2 LINE L2 3220 3312 -1 1164 246 79 3 chr10 31747352 31747682 -108569083 + MLT2B1 LTR ERVL 1 355 -165 1561 269 140 10 chr10 31747919 31748433 -108568332 + MLT1G LTR MaLR 10 590 0 186 191 0 0 chr10 31748616 31748663 -108568102 + (TA)n Simple_repeat Simple_repeat 1 47 0 230 65 65 0 chr10 31748663 31748709 -108568056 - LTR66 LTR ERVL -171 439 391 638 166 0 6 chr10 31748733 31748914 -108567851 + (TA)n Simple_repeat Simple_repeat 1 180 0 744 151 0 0 chr10 31748940 31749119 -108567646 + (TA)n Simple_repeat Simple_repeat 2 180 0 803 159 0 0 chr10 31749181 31749307 -108567458 + FLAM_C SINE Alu 2 127 -6 24 53 0 0 chr10 31749876 31749914 -108566851 + AT_rich Low_complexity Low_complexity 1 38 0 180 0 0 0 chr10 31750679 31750699 -108566066 + (CA)n Simple_repeat Simple_repeat 1 20 0 1921 162 0 10 chr10 31753636 31753950 -108562815 - AluJb SINE Alu -1 311 1 1826 157 0 39 chr10 31754247 31754559 -108562206 - AluJb SINE Alu -11 301 2 2185 138 16 24 chr10 31754927 31755304 -108561461 + THE1C LTR MaLR 1 374 -1 1352 218 10 17 chr10 31755395 31755684 -108561081 - AluJo SINE Alu -25 287 1 878 271 35 25 chr10 31757638 31757952 -108558813 + MARNA DNA Mariner 141 457 -129 234 150 0 0 chr10 31758279 31758319 -108558446 + (TG)n Simple_repeat Simple_repeat 2 41 0 2102 115 0 11 chr10 31758482 31758823 -108557942 + AluSq SINE Alu 3 340 0 1647 156 10 36 chr10 31759592 31759894 -108556871 + AluJo SINE Alu 1 294 -18 1771 160 11 0 chr10 31760248 31760516 -108556249 + AluJo SINE Alu 11 281 -31 195 69 0 0 chr10 31760519 31760548 -108556217 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 401 190 0 13 chr10 31761239 31761318 -108555447 - MER116 DNA Mariner -2 78 1 183 287 115 0 chr10 31761891 31761978 -108554787 - MIR SINE MIR -109 153 57 27 87 0 0 chr10 31762263 31762332 -108554433 + AT_rich Low_complexity Low_complexity 1 69 0 1601 180 10 35 chr10 31762338 31762627 -108554138 - AluJo SINE Alu -30 282 1 2011 110 29 18 chr10 31763865 31764186 -108552579 + AluSx SINE Alu 1 324 0 504 273 7 0 chr10 31764284 31764427 -108552338 - L1ME3A LINE L1 -316 5854 5711 1324 244 94 30 chr10 31764433 31764867 -108551898 - MLT1C LTR MaLR 0 467 6 591 259 155 20 chr10 31764944 31765241 -108551524 - L1ME3A LINE L1 -538 5626 5290 662 277 63 26 chr10 31765250 31765597 -108551168 - L1ME3A LINE L1 -880 5266 4907 269 277 48 54 chr10 31765693 31765859 -108550906 - L1ME LINE L1 -369 5752 5588 406 200 120 10 chr10 31766240 31766340 -108550425 + L2 LINE L2 3200 3310 -3 484 256 29 74 chr10 31766685 31766727 -108550038 + MIR SINE MIR 4 46 -216 3475 126 23 2 chr10 31766727 31767243 -108549522 - MER1A DNA MER1_type 0 527 1 484 256 29 74 chr10 31767243 31767442 -108549323 + MIR SINE MIR 46 234 -28 1046 97 0 0 chr10 31767944 31768078 -108548687 - AluSq/x SINE Alu -178 134 1 2394 79 7 0 chr10 31768671 31768975 -108547790 - AluSp SINE Alu -7 306 1 2203 237 140 9 chr10 31769195 31769886 -108546879 - LTR50 LTR ERVL -9 786 5 380 250 0 11 chr10 31770510 31770598 -108546167 - MIR SINE MIR -140 122 36 803 158 0 15 chr10 31770699 31770832 -108545933 + FLAM_C SINE Alu 3 133 0 422 296 19 0 chr10 31770879 31770987 -108545778 - MER117 DNA MER1_type -77 120 11 1868 115 91 0 chr10 31771025 31771311 -108545454 - AluSx SINE Alu 0 312 1 280 130 0 37 chr10 31772768 31772822 -108543943 + LTR29 LTR ERV1 471 555 -67 2227 95 3 46 chr10 31772832 31773158 -108543607 + AluSx SINE Alu 1 312 0 252 307 13 0 chr10 31773523 31773598 -108543167 + (CATA)n Simple_repeat Simple_repeat 1 76 0 588 250 23 23 chr10 31773862 31774034 -108542731 + MIR SINE MIR 3 174 -88 649 261 10 41 chr10 31774109 31774304 -108542461 + MLT1L LTR MaLR 421 609 -6 2216 137 0 32 chr10 31774372 31774716 -108542049 - MER1B DNA MER1_type 0 339 7 1537 174 56 7 chr10 31775228 31775498 -108541267 - AluJo SINE Alu -18 294 12 405 267 46 0 chr10 31775519 31775650 -108541115 - MIR SINE MIR -3 259 123 8448 113 14 18 chr10 31776113 31776955 -108539810 - HSMAR2 DNA Mariner 0 1302 467 239 79 26 0 chr10 31776955 31776993 -108539772 + (TTAG)n Simple_repeat Simple_repeat 3 41 0 8448 113 14 18 chr10 31776993 31777456 -108539309 - HSMAR2 DNA Mariner -835 467 3 850 280 24 89 chr10 31778341 31778723 -108538042 + MLT1I LTR MaLR 6 362 -47 2226 101 0 46 chr10 31778723 31779050 -108537715 + AluSx SINE Alu 1 312 0 29 56 0 28 chr10 31779627 31779671 -108537094 + AT_rich Low_complexity Low_complexity 1 44 -26 2587 153 53 93 chr10 31779671 31780024 -108536741 + MER7C DNA MER2_type 1 320 -2708 2261 86 3 49 chr10 31780024 31780348 -108536417 - AluSp SINE Alu -4 309 1 2587 153 53 93 chr10 31780348 31780617 -108536148 + MER7C DNA MER2_type 320 598 -4 29 56 0 28 chr10 31780617 31780644 -108536121 + AT_rich Low_complexity Low_complexity 44 70 0 1757 164 20 3 chr10 31781321 31781613 -108535152 + AluJb SINE Alu 1 297 -15 207 0 0 0 chr10 31781616 31781639 -108535126 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 522 122 22 0 chr10 31781853 31781943 -108534822 - L1MD2 LINE L1 -1 6358 6267 5102 200 25 28 chr10 31781947 31782105 -108534660 - L1MD1 LINE L1 -265 5977 5820 2374 109 0 3 chr10 31782105 31782418 -108534347 - AluSx SINE Alu 0 312 1 5102 200 25 28 chr10 31782418 31782944 -108533821 - L1MD1 LINE L1 -422 5820 5294 1994 84 29 93 chr10 31782944 31783255 -108533510 - AluY SINE Alu -20 291 1 5102 200 25 28 chr10 31783255 31784566 -108532199 - L1MD1 LINE L1 -948 5294 3974 215 61 30 0 chr10 31785146 31785179 -108531586 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 6263 131 18 42 chr10 31786429 31787361 -108529404 + L1MA6 LINE L1 4382 5335 -965 2171 119 3 0 chr10 31787361 31787655 -108529110 + AluSp SINE Alu 4 298 -15 6263 131 18 42 chr10 31787655 31788651 -108528114 + L1MA6 LINE L1 5335 6299 -1 1391 163 40 0 chr10 31788656 31788883 -108527882 + MER46A DNA MER2_type 1 236 0 1019 53 38 8 chr10 31789547 31789678 -108527087 + AluY SINE Alu 1 135 -176 229 65 0 0 chr10 31789711 31789757 -108527008 + LTR66 LTR ERVL 394 439 -171 1073 125 19 0 chr10 31789769 31789929 -108526836 + AluY SINE Alu 131 293 -18 2221 70 30 30 chr10 31790271 31790572 -108526193 + AluY SINE Alu 1 301 -10 216 0 0 0 chr10 31791683 31791707 -108525058 + (T)n Simple_repeat Simple_repeat 1 24 0 29 78 0 0 chr10 31792578 31792642 -108524123 + AT_rich Low_complexity Low_complexity 1 64 0 956 139 0 0 chr10 31792642 31792771 -108523994 - FLAM_C SINE Alu -3 130 2 828 258 163 79 chr10 31792792 31793284 -108523481 + MLT1H LTR MaLR 1 533 -16 23 33 0 0 chr10 31793715 31793745 -108523020 + AT_rich Low_complexity Low_complexity 1 30 0 504 184 73 18 chr10 31793756 31793865 -108522900 - LTR67 LTR ERVL -8 549 435 2065 139 0 3 chr10 31793917 31794226 -108522539 + AluJb SINE Alu 1 308 -4 927 135 30 0 chr10 31794274 31794407 -108522358 + AluSx SINE Alu 1 137 -175 313 200 0 113 chr10 31794407 31794487 -108522278 + AluSg/x SINE Alu 217 275 -25 1650 179 3 17 chr10 31794830 31795126 -108521639 - AluJo SINE Alu -19 293 2 185 204 0 56 chr10 31795131 31795185 -108521580 + MIR SINE MIR 128 178 -84 372 333 97 6 chr10 31795281 31795494 -108521271 + MIR SINE MIR 3 234 -28 576 191 0 25 chr10 31796188 31796345 -108520420 + GA-rich Low_complexity Low_complexity 3 155 0 316 183 0 108 chr10 31797075 31797168 -108519597 - MIR SINE MIR 0 262 180 1912 122 7 17 chr10 31797195 31797490 -108519275 - AluSx SINE Alu -17 295 4 288 276 11 11 chr10 31797497 31797584 -108519181 + L2 LINE L2 3226 3312 -1 385 244 122 32 chr10 31797587 31797743 -108519022 - MIR SINE MIR -79 183 14 1964 155 135 26 chr10 31797950 31798336 -108518429 - MSTA LTR MaLR 0 428 1 820 198 55 42 chr10 31798785 31799040 -108517725 - MLT1F LTR MaLR 0 542 244 562 266 0 8 chr10 31799038 31799166 -108517599 - MLT1F LTR MaLR -415 127 1 * 445 273 79 0 chr10 31799166 31799305 -108517460 + MIR SINE MIR 66 215 -47 381 22 0 0 chr10 31799737 31799783 -108516982 + (CA)n Simple_repeat Simple_repeat 2 47 0 867 148 0 0 chr10 31800839 31800974 -108515791 - FRAM SINE Alu -4 172 38 1283 274 102 19 chr10 31801141 31801604 -108515161 + MLT1H1 LTR MaLR 1 501 -54 949 194 42 5 chr10 31803108 31803299 -108513466 - AluJo SINE Alu -30 282 85 2278 140 0 3 chr10 31803308 31803658 -108513107 + L1PB4 LINE L1 5470 5818 -338 1068 158 0 18 chr10 31803658 31803829 -108512936 + FRAM SINE Alu 1 160 -16 1502 229 3 0 chr10 31803842 31804152 -108512613 + L1PB4 LINE L1 5846 6156 0 1929 135 80 0 chr10 31804585 31804874 -108511891 + AluSx SINE Alu 1 312 0 473 297 102 95 chr10 31805232 31805514 -108511251 - L2 LINE L2 -6 3266 2988 1722 172 43 20 chr10 31805514 31805816 -108510949 + AluJb SINE Alu 3 311 -1 473 297 102 95 chr10 31805816 31805899 -108510866 - L2 LINE L2 -284 2988 2907 2174 109 3 3 chr10 31805899 31806193 -108510572 + AluSx SINE Alu 1 294 -18 473 297 102 95 chr10 31806193 31806447 -108510318 - L2 LINE L2 -365 2907 2624 3015 126 61 18 chr10 31806447 31806940 -108509825 - MER49 LTR ERV1 0 923 410 754 141 92 43 chr10 31806921 31807084 -108509681 - MER49 LTR ERV1 -752 171 1 * 209 185 37 0 chr10 31807084 31807138 -108509627 - L2 LINE L2 -687 2627 2572 2094 106 7 0 chr10 31807210 31807530 -108509235 - AluSx SINE Alu 0 322 1 604 266 54 33 chr10 31807997 31808181 -108508584 - MIR SINE MIR -11 251 64 332 226 47 28 chr10 31809384 31809490 -108507275 + L3b LINE CR1 1288 1395 -188 529 309 0 0 chr10 31809749 31809927 -108506838 + (TGG)n Simple_repeat Simple_repeat 2 179 0 677 291 84 36 chr10 31810870 31810985 -108505780 + MLT1L LTR MaLR 135 243 -372 1102 224 129 79 chr10 31810985 31811481 -108505284 + LTR33 LTR ERVL 1 521 0 677 291 84 36 chr10 31811481 31811781 -108504984 + MLT1L LTR MaLR 243 570 -45 1555 174 28 25 chr10 31811825 31812107 -108504658 - AluJo SINE Alu -25 287 5 180 77 0 0 chr10 31812420 31812446 -108504319 + (TG)n Simple_repeat Simple_repeat 2 27 0 22 80 0 0 chr10 31812912 31812962 -108503803 + AT_rich Low_complexity Low_complexity 1 50 0 1786 175 0 7 chr10 31813125 31813416 -108503349 - AluJo SINE Alu -23 289 1 1867 156 0 31 chr10 31814017 31814337 -108502428 + AluJb SINE Alu 1 310 -2 296 260 16 57 chr10 31814385 31814508 -108502257 + MIR SINE MIR 74 191 -71 234 331 58 16 chr10 31814924 31815166 -108501599 + L2 LINE L2 2510 2761 -553 2043 130 0 23 chr10 31815428 31815729 -108501036 - AluSx SINE Alu -16 296 3 372 299 0 0 chr10 31815976 31816093 -108500672 + (TGG)n Simple_repeat Simple_repeat 2 118 0 403 209 89 73 chr10 31817189 31817380 -108499385 + L1 LINE L1 3796 3989 -2157 562 131 0 0 chr10 31817414 31817527 -108499238 + AluY SINE Alu 218 330 0 979 276 47 17 chr10 31817534 31817940 -108498825 + L1 LINE L1 4019 4436 -1710 1149 246 63 93 chr10 31818032 31818625 -108498140 + L1MC5 LINE L1 6668 7242 -733 437 284 106 22 chr10 31818663 31818984 -108497781 + L1MC5 LINE L1 7261 7393 -415 990 200 25 10 chr10 31819011 31819211 -108497554 - AluJb SINE Alu -24 288 86 403 231 146 75 chr10 31819225 31819546 -108497219 + L1MC5 LINE L1 7552 7895 -66 261 83 0 0 chr10 31819583 31819619 -108497146 + (T)n Simple_repeat Simple_repeat 1 36 0 1440 156 36 57 chr10 31819619 31819920 -108496845 + AluJo SINE Alu 2 296 -16 1858 153 0 27 chr10 31820755 31821056 -108495709 - AluSx SINE Alu -19 293 1 1687 133 43 47 chr10 31821906 31822207 -108494558 - AluSx SINE Alu -12 300 1 786 156 16 0 chr10 31822412 31822534 -108494231 - FLAM_C SINE Alu -19 124 1 2153 101 24 0 chr10 31822563 31822850 -108493915 - AluSp SINE Alu -19 294 1 542 245 41 54 chr10 31823152 31823299 -108493466 - MIR SINE MIR -108 154 10 300 320 96 0 chr10 31823496 31823621 -108493144 + L2 LINE L2 3136 3272 0 222 37 0 0 chr10 31823925 31823952 -108492813 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 485 284 32 42 chr10 31824735 31824925 -108491840 + MIR3 SINE MIR 14 201 -7 1200 264 75 45 chr10 31825013 31825482 -108491283 + LTR33 LTR ERVL 1 483 -38 946 176 106 10 chr10 31825634 31825833 -108490932 - L1PB4 LINE L1 -44 6112 5895 1313 112 0 11 chr10 31826137 31826316 -108490449 - AluSg/x SINE Alu -52 260 84 223 257 19 67 chr10 31826766 31826871 -108489894 - L2 LINE L2 -442 2872 2773 660 262 2 3 chr10 31826916 31827069 -108489696 + MLT1C LTR MaLR 22 175 -215 1701 168 3 34 chr10 31827073 31827364 -108489401 + AluJo SINE Alu 1 282 -30 840 163 0 15 chr10 31827560 31827695 -108489070 + FLAM_C SINE Alu 1 133 0 763 255 42 42 chr10 31827696 31827935 -108488830 + MLT1C LTR MaLR 207 445 -22 3743 155 61 120 chr10 31828240 31829163 -108487602 - MER21A LTR ERV1 -28 903 36 697 113 9 9 chr10 31829229 31829344 -108487421 - HSMAR2 DNA Mariner -2 1300 1186 357 198 47 93 chr10 31829600 31829769 -108486996 - MLT1H LTR MaLR -3 552 387 388 280 102 47 chr10 31829843 31830079 -108486686 - MLT1H LTR MaLR -297 252 4 313 249 46 19 chr10 31830968 31831092 -108485673 - MLT1H LTR MaLR 0 555 437 347 354 88 32 chr10 31831158 31831211 -108485554 - L2 LINE L2 -924 2390 2341 2119 113 10 0 chr10 31831211 31831502 -108485263 - AluSx SINE Alu -18 294 1 347 354 88 32 chr10 31831502 31831895 -108484870 - L2 LINE L2 -973 2341 1897 528 160 118 25 chr10 31831895 31832014 -108484751 + MER94 DNA DNA 1 130 -4 347 354 88 32 chr10 31832014 31832188 -108484577 - L2 LINE L2 -1417 1897 1734 2217 105 34 0 chr10 31832218 31832514 -108484251 - AluSx SINE Alu -6 306 1 393 22 0 0 chr10 31832653 31832699 -108484066 + (CA)n Simple_repeat Simple_repeat 1 46 0 589 285 23 50 chr10 31833772 31833993 -108482772 + MIR SINE MIR 37 251 -11 1416 157 35 4 chr10 31834064 31834294 -108482471 + AluJo SINE Alu 71 307 -5 2040 142 0 3 chr10 31834864 31835175 -108481590 - AluJo SINE Alu -2 310 1 323 246 34 87 chr10 31835632 31835839 -108480926 - L2 LINE L2 -11 3302 3107 350 229 108 90 chr10 31835897 31836016 -108480749 - L1ME4a LINE L1 -295 5826 5711 399 41 0 0 chr10 31836016 31836065 -108480700 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 350 229 108 90 chr10 31836065 31836086 -108480679 - L1ME4a LINE L1 -410 5711 5692 2082 109 22 0 chr10 31836086 31836361 -108480404 - AluSx SINE Alu -22 290 10 308 64 21 0 chr10 31836368 31836415 -108480350 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 350 229 108 90 chr10 31836415 31836488 -108480277 - L1ME4a LINE L1 -434 5687 5600 1619 175 3 41 chr10 31836502 31836822 -108479943 - AluJb SINE Alu -4 308 1 365 231 0 0 chr10 31837254 31837332 -108479433 + MER116 DNA Mariner 2 79 -1 1259 113 6 0 chr10 31837572 31837749 -108479016 + L1PB1 LINE L1 5974 6151 0 231 121 0 0 chr10 31837789 31837822 -108478943 + LTR54 LTR ERV1 407 439 -71 2330 108 0 0 chr10 31837839 31838135 -108478630 - AluSq SINE Alu -17 296 1 288 29 0 0 chr10 31838873 31838908 -108477857 - MADE1 DNA Mariner -44 36 2 780 204 180 0 chr10 31839203 31839414 -108477351 - MLT1B LTR MaLR 0 390 142 2422 64 7 0 chr10 31839415 31839711 -108477054 + AluY SINE Alu 3 300 -11 183 258 24 97 chr10 31840055 31840179 -108476586 - MIR SINE MIR -64 144 30 1710 168 40 23 chr10 31840500 31840803 -108475962 - AluJo SINE Alu -4 308 1 439 259 0 30 chr10 31840803 31840934 -108475831 - MIR SINE MIR -38 224 98 273 146 40 0 chr10 31840942 31840998 -108475767 - MLT1G1 LTR MaLR -2 590 483 2569 71 0 3 chr10 31841001 31841311 -108475454 + AluSc SINE Alu 1 309 0 681 182 8 3 chr10 31841352 31841480 -108475285 + L1ME1 LINE L1 5862 5987 -179 450 156 22 0 chr10 31841480 31841561 -108475204 + L1MD2 LINE L1 6267 6358 -1 681 182 8 3 chr10 31841561 31841573 -108475192 + L1ME1 LINE L1 5987 5997 -169 243 0 0 0 chr10 31841775 31841802 -108474963 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1803 158 20 3 chr10 31841805 31842097 -108474668 - AluJb SINE Alu -15 297 1 29 56 0 28 chr10 31842774 31842801 -108473964 + AT_rich Low_complexity Low_complexity 1 27 -43 2654 148 53 93 chr10 31842801 31843070 -108473695 - MER7C DNA MER2_type -2430 598 320 2297 88 3 31 chr10 31843070 31843388 -108473377 + AluSp SINE Alu 1 309 -4 2654 148 53 93 chr10 31843388 31843741 -108473024 - MER7C DNA MER2_type -2708 320 1 29 56 0 28 chr10 31843741 31843785 -108472980 + AT_rich Low_complexity Low_complexity 27 70 0 545 255 43 64 chr10 31843890 31844078 -108472687 + MER5A DNA MER1_type 3 186 -3 1227 228 92 11 chr10 31844116 31844288 -108472477 + MLT1B LTR MaLR 2 159 -231 207 0 0 0 chr10 31844288 31844311 -108472454 + (TC)n Simple_repeat Simple_repeat 2 24 0 1227 228 92 11 chr10 31844311 31844498 -108472267 + MLT1B LTR MaLR 159 390 0 2230 115 3 0 chr10 31844540 31844845 -108471920 + AluSc SINE Alu 1 306 -3 288 314 52 26 chr10 31844958 31845152 -108471613 + L2 LINE L2 2739 2937 -377 1255 226 0 24 chr10 31845777 31846064 -108470701 - AluJo SINE Alu -32 280 1 210 118 0 0 chr10 31846800 31846834 -108469931 + (CA)n Simple_repeat Simple_repeat 2 35 0 2258 172 12 34 chr10 31848222 31848640 -108468125 - Tigger2a DNA MER2_type 0 434 26 420 257 18 0 chr10 31849240 31849349 -108467416 - MER81 DNA DNA 0 114 4 303 226 0 24 chr10 31849502 31849526 -108467239 + L1MC4 LINE L1 6622 6645 -1397 1705 169 3 34 chr10 31849526 31849822 -108466943 - AluJb SINE Alu -25 287 1 303 226 0 24 chr10 31849822 31849881 -108466884 + L1MC4 LINE L1 6645 6703 -1339 192 158 0 0 chr10 31849882 31849920 -108466845 + (TG)n Simple_repeat Simple_repeat 1 38 0 266 115 0 39 chr10 31849921 31849973 -108466792 + MER4-int LTR ERV1 1113 1162 -5436 527 173 9 0 chr10 31849974 31850084 -108466681 + (TG)n Simple_repeat Simple_repeat 2 112 0 227 114 23 0 chr10 31850218 31850262 -108466503 + CT-rich Low_complexity Low_complexity 3 47 0 242 300 0 0 chr10 31850495 31850555 -108466210 + MER81 DNA DNA 5 64 -50 378 0 0 0 chr10 31850695 31850737 -108466028 + (TA)n Simple_repeat Simple_repeat 2 43 0 1973 141 0 4 chr10 31850739 31851015 -108465750 - AluSx SINE Alu -37 275 1 1701 185 3 7 chr10 31851403 31851695 -108465070 - AluJb SINE Alu -16 296 6 1983 93 0 0 chr10 31853827 31854074 -108462691 + AluY SINE Alu 1 247 -64 1658 160 6 47 chr10 31854260 31854578 -108462187 - AluJo SINE Alu -7 305 1 185 260 280 20 chr10 31854848 31854998 -108461767 - L2 LINE L2 -989 2325 2137 457 311 57 0 chr10 31855066 31855243 -108461522 - L2 LINE L2 -1287 2027 1841 824 211 0 12 chr10 31855248 31855414 -108461351 - FRAM SINE Alu -12 164 1 332 325 31 0 chr10 31855414 31855577 -108461188 - L2 LINE L2 -1463 1851 1684 1584 192 10 19 chr10 31855588 31855901 -108460864 - AluJo SINE Alu -2 310 1 606 220 134 95 chr10 31855963 31856417 -108460348 + MLT1L LTR MaLR 143 614 -1 2293 79 34 0 chr10 31857263 31857555 -108459210 - AluSq SINE Alu -11 302 1 451 253 207 15 chr10 31857555 31857753 -108459012 + MER102b DNA MER1_type 75 310 -31 1632 184 31 10 chr10 31858873 31859166 -108457599 + AluJo SINE Alu 1 299 -13 189 214 0 0 chr10 31859835 31859877 -108456888 + (CATATA)n Simple_repeat Simple_repeat 2 43 0 403 177 0 149 chr10 31860350 31860475 -108456290 - FLAM_A SINE Alu -182 120 17 2417 140 6 8 chr10 31860475 31860840 -108455925 - THE1B LTR MaLR 0 364 1 403 177 0 149 chr10 31860840 31860855 -108455910 - FLAM_A SINE Alu -285 17 1 704 152 0 0 chr10 31860856 31860955 -108455810 - 5S rRNA rRNA -1 120 22 207 0 0 0 chr10 31861499 31861522 -108455243 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 2066 113 0 0 chr10 31861587 31861861 -108454904 + AluSx SINE Alu 6 279 -33 291 28 0 0 chr10 31861861 31861897 -108454868 + (CAAAA)n Simple_repeat Simple_repeat 1 36 0 23 54 0 0 chr10 31862736 31862773 -108453992 + AT_rich Low_complexity Low_complexity 1 37 0 292 272 10 10 chr10 31863544 31863647 -108453118 - L1ME3 LINE L1 -4 6158 6056 2350 98 7 0 chr10 31863853 31864159 -108452606 + AluSq SINE Alu 1 308 -5 201 163 0 23 chr10 31864941 31864984 -108451781 - L2 LINE L2 -1 3271 3230 884 282 74 57 chr10 31867295 31867400 -108449365 + L1M4 LINE L1 2901 3003 -3143 1522 114 50 5 chr10 31867400 31867620 -108449145 - MER30 DNA MER1_type 0 230 1 884 282 74 57 chr10 31867620 31868465 -108448300 + L1M4 LINE L1 3003 3867 -2279 1377 195 4 23 chr10 31868686 31868942 -108447823 + AluJo SINE Alu 6 256 -56 225 319 59 50 chr10 31869248 31869367 -108447398 + MIR3 SINE MIR 58 177 -31 2435 82 18 108 chr10 31869539 31869939 -108446826 - THE1B LTR MaLR 0 364 1 2244 99 3 19 chr10 31870207 31870521 -108446244 + AluSc SINE Alu 1 309 0 307 283 158 26 chr10 31870669 31870821 -108445944 + MER5A DNA MER1_type 18 189 0 314 167 12 0 chr10 31871002 31871086 -108445679 + CT-rich Low_complexity Low_complexity 2 86 0 564 96 32 21 chr10 31871975 31872069 -108444696 + MER4A LTR ERV1 1 95 -569 1718 140 162 58 chr10 31872072 31872381 -108444384 + MER4A LTR ERV1 262 616 -48 2401 105 0 3 chr10 31872381 31872694 -108444071 - AluSx SINE Alu 0 312 1 1718 140 162 58 chr10 31872694 31872749 -108444016 + MER4A LTR ERV1 616 664 0 1471 196 33 33 chr10 31873272 31873573 -108443192 - AluJo SINE Alu -1 301 1 2165 116 0 22 chr10 31875435 31875754 -108441011 + AluSx SINE Alu 1 312 0 802 167 8 0 chr10 31876041 31876173 -108440592 + FLAM_A SINE Alu 1 133 0 263 286 9 18 chr10 31876442 31876554 -108440211 + L1MD1 LINE L1 5762 5872 -1936 531 308 60 0 chr10 31876805 31876990 -108439775 + MIR SINE MIR 5 200 -62 2176 115 0 19 chr10 31877039 31877352 -108439413 + AluSg SINE Alu 4 310 0 1019 170 6 22 chr10 31877761 31877943 -108438822 - FRAM SINE Alu 0 176 1 1208 122 11 26 chr10 31878242 31878431 -108438334 + AluJb SINE Alu 107 292 -20 289 321 110 23 chr10 31879684 31879902 -108436863 - MIR SINE MIR -6 256 20 2082 73 0 0 chr10 31880820 31881066 -108435699 - AluY SINE Alu -65 246 1 2114 130 0 7 chr10 31881787 31882087 -108434678 - AluSx SINE Alu -14 298 1 1388 204 74 9 chr10 31932236 31932552 -108384213 + L1MD1 LINE L1 5896 6235 -7 2108 100 0 13 chr10 31932552 31932852 -108383913 + AluSq SINE Alu 1 296 -17 647 233 0 0 chr10 31933328 31933461 -108383304 - FLAM_A SINE Alu -4 138 6 2108 119 3 0 chr10 31933538 31933841 -108382924 - AluSc SINE Alu -5 304 1 2121 111 10 0 chr10 31933842 31934139 -108382626 - AluSq SINE Alu -13 300 1 24 32 0 0 chr10 31935404 31935435 -108381330 + AT_rich Low_complexity Low_complexity 1 31 0 777 138 31 15 chr10 31935498 31935628 -108381137 + FLAM_C SINE Alu 1 132 -1 1894 114 11 0 chr10 31935661 31935942 -108380823 + AluSq SINE Alu 1 320 0 190 0 111 0 chr10 31935942 31935978 -108380787 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 1916 125 25 0 chr10 31936489 31936845 -108379920 + AluSx SINE Alu 1 363 0 247 204 0 19 chr10 31937680 31937734 -108379031 + (TG)n Simple_repeat Simple_repeat 1 53 0 249 279 156 39 chr10 31937947 31938101 -108378664 - MER3 DNA MER1_type -83 126 2 2091 93 3 7 chr10 31938246 31938548 -108378217 + AluY SINE Alu 4 304 -7 773 214 14 0 chr10 31938582 31938727 -108378038 + Tigger3(Golem) DNA MER2_type 2891 3037 0 1967 112 21 0 chr10 31938945 31939231 -108377534 + AluSx SINE Alu 13 304 -8 2480 47 0 0 chr10 31940141 31940440 -108376325 - AluY SINE Alu -12 299 1 383 258 149 46 chr10 31941284 31941478 -108375287 + MIR SINE MIR 49 262 0 200 169 0 17 chr10 31941526 31941585 -108375180 + (TA)n Simple_repeat Simple_repeat 1 58 0 770 183 0 30 chr10 31941589 31941720 -108375045 - FLAM_C SINE Alu -14 129 3 929 70 86 0 chr10 31941872 31942000 -108374765 - MER85 DNA T2_type 0 139 1 802 246 87 5 chr10 31942004 31942211 -108374554 - MIR SINE MIR -34 228 5 351 119 0 0 chr10 31942850 31942917 -108373848 + (CATA)n Simple_repeat Simple_repeat 2 68 0 4509 49 7 0 chr10 31943289 31943840 -108372925 + L1PA7 LINE L1 5596 6150 -4 691 286 44 18 chr10 31943897 31944124 -108372641 - MIR SINE MIR -2 260 28 1327 156 5 0 chr10 31945149 31945361 -108371404 - AluSx SINE Alu -99 213 1 370 206 68 27 chr10 31945573 31945740 -108371025 + MER34 LTR ERV1 1 237 -348 992 156 0 33 chr10 31945748 31945959 -108370806 - AluSc SINE Alu -15 294 91 2147 135 28 38 chr10 31946333 31946371 -108370394 - L1MC1 LINE L1 -15 6318 6281 1855 173 0 0 chr10 31946371 31946677 -108370088 + AluJb SINE Alu 1 306 -6 2147 135 28 38 chr10 31946677 31946895 -108369870 - L1MC1 LINE L1 -52 6281 6065 1584 165 71 9 chr10 31946895 31947235 -108369530 - MER46B DNA MER2_type 0 236 1 2147 135 28 38 chr10 31947235 31947369 -108369396 - L1MC1 LINE L1 -268 6065 5931 2014 138 0 3 chr10 31948954 31949259 -108367506 - AluSx SINE Alu -8 304 1 443 195 195 0 chr10 31950095 31950218 -108366547 + L2 LINE L2 3167 3313 0 2185 80 3 3 chr10 31951051 31951340 -108365425 - AluSg1 SINE Alu -20 289 1 1022 188 92 98 chr10 31952132 31952599 -108364166 - MER4C LTR ERV1 0 465 2 2604 96 14 3 chr10 31954171 31954535 -108362230 - L1PA13 LINE L1 -2 6161 5794 471 114 0 0 chr10 31954853 31954932 -108361833 + L1MA5A LINE L1 6214 6292 -5 1349 184 25 22 chr10 31955741 31955865 -108360900 + AluJb SINE Alu 4 126 -186 1506 186 72 0 chr10 31955865 31956156 -108360609 + AluJb SINE Alu 1 312 0 1349 184 25 22 chr10 31956156 31956308 -108360457 + AluJb SINE Alu 126 281 -31 2253 174 22 26 chr10 31956520 31956979 -108359786 - LTR32 LTR ERVL 0 471 15 1948 131 0 7 chr10 31957627 31957924 -108358841 + AluJb SINE Alu 1 295 -17 1587 160 29 11 chr10 31958453 31958773 -108357992 - AluJo SINE Alu 0 327 3 2014 135 0 7 chr10 31958949 31959253 -108357512 - AluSx SINE Alu -10 302 1 694 175 0 0 chr10 31960848 31960968 -108355797 + AluSg/x SINE Alu 190 309 0 2019 138 0 0 chr10 31961554 31961865 -108354900 + AluSx SINE Alu 1 311 -1 466 217 104 26 chr10 31962284 31962399 -108354366 + L2 LINE L2 3188 3311 -2 228 163 0 0 chr10 31963570 31963613 -108353152 + T-rich Low_complexity Low_complexity 1 43 0 237 33 0 0 chr10 31963891 31963921 -108352844 + (TG)n Simple_repeat Simple_repeat 2 31 0 183 42 0 0 chr10 31964238 31964262 -108352503 + (A)n Simple_repeat Simple_repeat 1 24 0 206 121 0 0 chr10 31966273 31966306 -108350459 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 333 282 77 51 chr10 31967099 31967255 -108349510 + MER20B DNA MER1_type 5 164 -619 2183 95 0 16 chr10 31967394 31967699 -108349066 - AluSg SINE Alu -9 301 2 2152 122 0 3 chr10 31968128 31968439 -108348326 - AluSx SINE Alu -1 311 2 2165 106 0 0 chr10 31968852 31969153 -108347612 - AluSg SINE Alu -9 301 1 1048 83 0 0 chr10 31969153 31969286 -108347479 - AluSg SINE Alu -177 133 1 205 240 20 40 chr10 31970605 31970655 -108346110 - MIR SINE MIR -201 61 13 315 209 302 0 chr10 31970663 31970802 -108345963 - MER5A DNA MER1_type 0 189 9 1565 183 0 7 chr10 31972225 31972520 -108344245 + AluJo SINE Alu 5 297 -15 1379 218 200 43 chr10 31972993 31973454 -108343311 + MER50 LTR ERV1 10 592 -142 1898 93 72 0 chr10 31973454 31973732 -108343033 - AluSx SINE Alu -14 298 1 1379 218 200 43 chr10 31973732 31973880 -108342885 + MER50 LTR ERV1 592 715 -19 2331 157 96 26 chr10 31973938 31974436 -108342329 + L1MB3 LINE L1 5651 6183 0 2080 110 0 19 chr10 31975441 31975749 -108341016 - AluSx SINE Alu -10 302 1 865 215 6 0 chr10 31976065 31976237 -108340528 - FRAM SINE Alu -4 172 1 484 245 37 31 chr10 31976362 31976525 -108340240 + MER5B DNA MER1_type 2 165 -13 278 310 100 0 chr10 31977661 31977761 -108339004 + MIR SINE MIR 3 112 -150 22 0 0 0 chr10 31978704 31978726 -108338039 + AT_rich Low_complexity Low_complexity 1 22 0 2229 95 0 0 chr10 31978736 31979030 -108337735 + AluSq SINE Alu 1 294 -19 345 207 299 0 chr10 31980076 31980163 -108336602 + MER44D DNA MER2_type 1 383 -226 1647 140 0 73 chr10 31980242 31980556 -108336209 - AluSx SINE Alu -21 291 1 186 133 0 0 chr10 31980580 31980610 -108336155 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 1494 194 0 14 chr10 31980618 31980902 -108335863 - AluJo SINE Alu -32 280 1 758 116 20 62 chr10 31980902 31981048 -108335717 + MER44D DNA MER2_type 466 605 0 473 282 81 6 chr10 31981150 31981324 -108335441 - L1MC4a LINE L1 -1934 5874 5688 518 224 139 54 chr10 31981366 31981589 -108335176 - L1MC4a LINE L1 -2249 5559 5318 204 138 46 0 chr10 31981738 31981803 -108334962 + (TA)n Simple_repeat Simple_repeat 2 69 0 315 259 60 43 chr10 31981835 31981942 -108334823 - L1MC4a LINE L1 -1007 5139 5028 1994 123 7 0 chr10 31981942 31982242 -108334523 - AluSx SINE Alu -10 302 1 764 179 0 0 chr10 31982254 31982377 -108334388 - FLAM_C SINE Alu -19 124 2 476 283 23 40 chr10 31982380 31982733 -108334032 - L1MC5 LINE L1 -34 7927 7581 2061 133 0 0 chr10 31982787 31983088 -108333677 - AluSx SINE Alu -11 301 1 340 291 92 8 chr10 31983101 31983352 -108333413 - L1MC4a LINE L1 -1133 5013 4742 373 342 76 46 chr10 31983364 31983668 -108333097 - L1MC4a LINE L1 -1465 4681 4369 5032 185 139 103 chr10 31984346 31986040 -108330725 + MER52A LTR ERV1 1 1755 0 1732 138 112 4 chr10 31986483 31986751 -108330014 - AluSx SINE Alu -15 297 1 2230 109 10 3 chr10 31988926 31989228 -108327537 + AluSc SINE Alu 1 304 -5 206 276 66 0 chr10 31989274 31989350 -108327415 - MER5A DNA MER1_type -57 132 52 180 0 0 0 chr10 31989362 31989382 -108327383 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1524 161 36 29 chr10 31989387 31989661 -108327104 - AluJo SINE Alu -36 276 1 1298 115 39 0 chr10 31989864 31990046 -108326719 + AluSc SINE Alu 109 297 -12 311 205 17 17 chr10 31990317 31990434 -108326331 + T-rich Low_complexity Low_complexity 3 119 0 22 35 0 0 chr10 31990598 31990627 -108326138 + AT_rich Low_complexity Low_complexity 1 29 0 1009 179 0 6 chr10 31991782 31991950 -108324815 + FRAM SINE Alu 1 160 -16 1351 107 5 5 chr10 31993063 31993259 -108323506 - AluSg/x SINE Alu 0 310 115 320 184 37 118 chr10 31993313 31993449 -108323316 - LTR48 LTR ERV1 -9 778 654 301 75 0 0 chr10 31993563 31993603 -108323162 - Alu SINE Alu -261 42 3 21 57 0 0 chr10 31993615 31993650 -108323115 + AT_rich Low_complexity Low_complexity 1 35 0 823 121 0 0 chr10 31993657 31993773 -108322992 - FLAM_C SINE Alu -8 135 20 318 220 0 0 chr10 31994519 31994619 -108322146 + (CA)n Simple_repeat Simple_repeat 1 100 0 2814 20 0 0 chr10 31994657 31994961 -108321804 + AluY SINE Alu 1 304 -7 1764 148 36 13 chr10 31995019 31995324 -108321441 + AluSq SINE Alu 1 312 -1 306 280 37 63 chr10 31995509 31995827 -108320938 + HAL1 LINE L1 982 1292 -1215 1401 154 30 21 chr10 31995827 31996061 -108320704 - MER46A DNA MER2_type 0 236 1 306 280 37 63 chr10 31996061 31996092 -108320673 + HAL1 LINE L1 1292 1322 -1185 761 233 112 109 chr10 31996112 31996747 -108320018 + LTR41 LTR ERVL 3 642 -131 1911 140 27 10 chr10 31996747 31997039 -108319726 - AluJo SINE Alu -15 297 1 761 233 112 109 chr10 31997039 31997147 -108319618 + LTR41 LTR ERVL 642 748 -25 24 0 0 0 chr10 31997502 31997526 -108319239 + AT_rich Low_complexity Low_complexity 1 24 0 2030 133 0 0 chr10 31997810 31998096 -108318669 + AluSx SINE Alu 11 296 -16 2140 109 3 7 chr10 31998175 31998460 -108318305 + AluSx SINE Alu 16 299 -13 440 127 0 0 chr10 31998526 31998589 -108318176 + AluS SINE Alu 1 63 -255 582 119 0 69 chr10 31998589 31998690 -108318075 + U6 snRNA snRNA 14 107 0 42 0 0 0 chr10 31998690 31998732 -108318033 + AT_rich Low_complexity Low_complexity 1 42 0 2129 141 47 81 chr10 31998872 31999319 -108317446 + MSTB1 LTR MaLR 1 432 0 257 277 14 78 chr10 31999356 31999497 -108317268 + HAL1b LINE L1 743 874 -474 2284 105 10 7 chr10 31999576 31999882 -108316883 + AluSx SINE Alu 1 307 -5 264 59 0 0 chr10 31999944 31999978 -108316787 + (TG)n Simple_repeat Simple_repeat 1 34 0 1012 195 41 32 chr10 32000201 32000422 -108316343 - MER58A DNA MER1_type -1 223 1 456 239 58 19 chr10 32000502 32000657 -108316108 + MER103 DNA DNA 3 163 -3 374 277 27 9 chr10 32000731 32000843 -108315922 - MIR3 SINE MIR -46 162 49 1831 141 57 10 chr10 32001358 32001656 -108315109 + AluJb SINE Alu 1 312 0 3172 194 63 57 chr10 32002534 32003435 -108313330 + Charlie5 DNA MER1_type 1 907 -1705 4735 167 36 39 chr10 32003438 32003631 -108313134 + Charlie5 DNA MER1_type 1555 1747 -877 2289 109 10 19 chr10 32003631 32003944 -108312821 + AluY SINE Alu 1 310 -1 4735 167 36 39 chr10 32003944 32004730 -108312035 + Charlie5 DNA MER1_type 1747 2532 -92 2387 78 0 3 chr10 32004730 32005024 -108311741 + AluSc SINE Alu 1 293 -16 4735 167 36 39 chr10 32005024 32005111 -108311654 + Charlie5 DNA MER1_type 2532 2618 -6 304 270 70 10 chr10 32005122 32005222 -108311543 + MER5A DNA MER1_type 4 109 -80 1625 228 132 32 chr10 32005277 32005513 -108311252 + L1MEc LINE L1 302 513 -5883 2129 142 7 0 chr10 32005513 32005822 -108310943 + AluSx SINE Alu 1 311 -1 1625 228 132 32 chr10 32005822 32005866 -108310899 + L1MEc LINE L1 513 551 -5845 852 100 77 8 chr10 32005866 32005996 -108310769 + MER85 DNA T2_type 1 139 0 1625 228 132 32 chr10 32005996 32006281 -108310484 + L1MEc LINE L1 551 925 -5471 1162 220 65 21 chr10 32006300 32006728 -108310037 + L1MEc LINE L1 996 1442 -4954 926 183 29 17 chr10 32006728 32006903 -108309862 + AluJo SINE Alu 118 294 -18 2568 213 64 86 chr10 32006906 32007541 -108309224 + L1MEc LINE L1 1454 2101 -4114 1922 155 3 3 chr10 32007541 32007831 -108308934 - AluSx SINE Alu -20 292 3 2568 213 64 86 chr10 32007831 32007923 -108308842 + L1MEc LINE L1 2101 2193 -4022 207 69 0 0 chr10 32007923 32007952 -108308813 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2568 213 64 86 chr10 32007952 32008443 -108308322 + L1MEc LINE L1 2193 2599 -3616 2119 114 50 3 chr10 32008640 32008938 -108307827 + AluSx SINE Alu 1 312 0 504 292 54 13 chr10 32009535 32009768 -108306997 + MIR SINE MIR 10 252 -10 1296 170 59 95 chr10 32009778 32010084 -108306681 + AluJo SINE Alu 6 300 -12 27 0 0 0 chr10 32010238 32010265 -108306500 + AT_rich Low_complexity Low_complexity 1 27 0 294 29 0 0 chr10 32011057 32011092 -108305673 + (CA)n Simple_repeat Simple_repeat 2 36 0 2284 108 0 22 chr10 32011426 32011740 -108305025 + AluSx SINE Alu 1 307 -5 23 0 0 0 chr10 32012598 32012621 -108304144 + AT_rich Low_complexity Low_complexity 1 23 0 1913 164 0 0 chr10 32012621 32012908 -108303857 - AluJo SINE Alu -25 287 1 2235 106 0 0 chr10 32013151 32013443 -108303322 + AluSx SINE Alu 1 292 -20 204 137 98 59 chr10 32013608 32013659 -108303106 + L2 LINE L2 3165 3217 -96 732 179 8 0 chr10 32013995 32014118 -108302647 - FRAM SINE Alu -57 119 1 485 32 16 0 chr10 32016137 32016200 -108300565 + (TG)n Simple_repeat Simple_repeat 2 65 0 2454 98 0 0 chr10 32016240 32016547 -108300218 + AluSg SINE Alu 1 307 -3 1728 141 67 30 chr10 32016593 32016890 -108299875 + AluJo SINE Alu 1 308 -4 188 235 39 0 chr10 32017121 32017172 -108299593 + MIR SINE MIR 94 146 -116 491 247 64 89 chr10 32019889 32020010 -108296755 - MIR SINE MIR -2 260 146 1663 149 71 4 chr10 32020010 32020291 -108296474 - AluJo SINE Alu -12 300 1 491 247 64 89 chr10 32020291 32020404 -108296361 - MIR SINE MIR -116 146 32 268 174 0 0 chr10 32021151 32021197 -108295568 + MIR SINE MIR 104 149 -113 491 198 43 56 chr10 32024018 32024180 -108292585 - MER5A DNA MER1_type 0 189 30 188 235 29 44 chr10 32024124 32024192 -108292573 + MER5A DNA MER1_type 116 182 -7 * 1343 105 89 189 chr10 32024374 32024791 -108291974 - MLT1B LTR MaLR -12 384 2 2621 58 0 0 chr10 32024839 32025150 -108291615 + AluY SINE Alu 1 311 0 607 206 8 0 chr10 32025753 32025884 -108290881 - FLAM_C SINE Alu 0 133 2 472 191 0 187 chr10 32027027 32027148 -108289617 - MER112 DNA MER1_type -40 220 168 552 186 124 0 chr10 32027148 32027261 -108289504 + FLAM_A SINE Alu 2 128 -5 472 191 0 187 chr10 32027261 32027390 -108289375 - MER112 DNA MER1_type -92 168 17 25 0 0 0 chr10 32028252 32028277 -108288488 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr10 32028308 32028330 -108288435 + AT_rich Low_complexity Low_complexity 1 22 0 1702 161 61 84 chr10 32028701 32029143 -108287622 + MSTB1 LTR MaLR 1 432 0 2352 121 0 0 chr10 32029165 32029478 -108287287 - AluSq SINE Alu 0 313 1 1847 153 39 0 chr10 32029964 32030245 -108286520 - AluJo SINE Alu -20 292 1 274 297 187 0 chr10 32030391 32030546 -108286219 + MIR SINE MIR 79 262 0 2357 113 0 0 chr10 32030958 32031269 -108285496 - AluSx SINE Alu -1 311 1 2323 113 0 0 chr10 32031500 32031811 -108284954 + AluSx SINE Alu 1 311 -1 223 303 34 34 chr10 32032144 32032263 -108284502 - L3b LINE CR1 -216 1367 1249 2867 16 0 0 chr10 32032372 32032683 -108284082 + AluYa5 SINE Alu 1 311 0 2343 82 3 35 chr10 32033673 32033988 -108282777 - AluSq SINE Alu -8 305 1 378 0 0 0 chr10 32034054 32034096 -108282669 + (TG)n Simple_repeat Simple_repeat 1 42 0 258 32 0 0 chr10 32034401 32034432 -108282333 + (TA)n Simple_repeat Simple_repeat 2 32 0 1651 187 0 21 chr10 32034432 32034721 -108282044 - AluJb SINE Alu -16 296 14 797 239 201 26 chr10 32034754 32035102 -108281663 + MLT1I LTR MaLR 1 409 0 183 256 0 0 chr10 32035102 32035141 -108281624 - MIR SINE MIR -4 258 220 1613 187 64 124 chr10 32035461 32036011 -108280754 + LTR40a LTR ERVL 3 519 0 233 279 11 142 chr10 32037120 32037310 -108279455 - L2 LINE L2 -177 3095 2931 3382 197 94 22 chr10 32037353 32038207 -108278558 + L1MC4a LINE L1 6891 7805 -3 446 360 67 27 chr10 32038253 32038847 -108277918 - L2 LINE L2 -459 2855 2238 187 315 0 0 chr10 32039005 32039059 -108277706 - L2 LINE L2 -227 3045 2992 387 173 67 0 chr10 32039065 32039140 -108277625 - LTR23 LTR ERV1 0 437 358 698 162 68 16 chr10 32039202 32039393 -108277372 + L1ME1 LINE L1 3816 4016 -2130 750 163 77 61 chr10 32039548 32039794 -108276971 - LTR56 LTR ERV1 -120 325 76 272 83 21 0 chr10 32039794 32039842 -108276923 + (CAAAA)n Simple_repeat Simple_repeat 3 51 0 725 179 8 0 chr10 32039842 32039959 -108276806 - FLAM_C SINE Alu -19 124 7 319 41 41 0 chr10 32040818 32040867 -108275898 + (TTTC)n Simple_repeat Simple_repeat 1 51 0 1048 212 28 25 chr10 32041199 32041555 -108275210 + L1ME1 LINE L1 4362 4919 -1227 3123 202 67 37 chr10 32041567 32041665 -108275100 + L1ME1 LINE L1 5225 5319 -847 2353 80 17 3 chr10 32041665 32041966 -108274799 + AluSg SINE Alu 1 305 -5 3123 202 67 37 chr10 32041966 32042090 -108274675 + L1ME1 LINE L1 5319 5438 -728 5120 117 23 12 chr10 32042090 32042860 -108273905 + MER4E LTR ERV1 1 779 0 3123 202 67 37 chr10 32042860 32043504 -108273261 + L1ME1 LINE L1 5438 6115 -51 1310 164 91 46 chr10 32043504 32043767 -108272998 - AluJo SINE Alu -19 293 19 1034 227 52 46 chr10 32045255 32045367 -108271398 - MLT1C LTR MaLR 0 467 357 1525 176 64 0 chr10 32045367 32045477 -108271288 + AluJo SINE Alu 1 103 -209 2289 64 0 0 chr10 32045477 32045742 -108271023 + AluSc SINE Alu 13 277 -32 389 36 0 18 chr10 32045745 32045801 -108270964 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 1525 176 64 0 chr10 32045801 32045953 -108270812 + AluJo SINE Alu 104 284 -28 1034 227 52 46 chr10 32045953 32046342 -108270423 - MLT1C LTR MaLR -110 357 6 316 264 104 8 chr10 32046347 32046472 -108270293 - MIR SINE MIR -60 202 66 1695 133 16 67 chr10 32046541 32046856 -108269909 + AluSx SINE Alu 1 299 -13 1085 133 0 0 chr10 32047433 32047606 -108269159 - AluSq SINE Alu 0 305 133 2151 112 3 0 chr10 32047607 32047894 -108268871 - AluSx SINE Alu -24 288 1 1851 160 0 3 chr10 32048159 32048447 -108268318 + AluSx SINE Alu 1 287 -25 204 97 0 0 chr10 32048449 32048480 -108268285 + (CATA)n Simple_repeat Simple_repeat 2 32 0 2629 144 76 11 chr10 32048488 32048946 -108267819 - LTR45B LTR ERV1 0 489 2 2089 120 30 13 chr10 32049026 32049325 -108267440 + AluSg SINE Alu 1 304 -6 2250 96 20 0 chr10 32049407 32049700 -108267065 - AluSq SINE Alu -14 299 1 393 258 83 50 chr10 32050384 32050661 -108266104 - L1MC4a LINE L1 -11 6110 5811 2071 119 6 10 chr10 32050661 32050972 -108265793 - AluSx SINE Alu -2 310 1 393 258 83 50 chr10 32050972 32051133 -108265632 - L1MC4a LINE L1 -310 5811 5657 1770 170 3 3 chr10 32051163 32051451 -108265314 - AluJb SINE Alu -24 288 1 2223 132 0 0 chr10 32051579 32051890 -108264875 - AluSq SINE Alu -2 311 1 499 275 122 13 chr10 32052823 32053052 -108263713 + MIR SINE MIR 1 254 -8 550 293 63 66 chr10 32053800 32054335 -108262430 + L1MC4 LINE L1 7334 7973 -69 2750 112 13 74 chr10 32054720 32055039 -108261726 + MER65A LTR ERV1 1 283 -162 2142 108 0 3 chr10 32055039 32055326 -108261439 + AluSg SINE Alu 22 307 -3 2750 112 13 74 chr10 32055326 32055480 -108261285 + MER65A LTR ERV1 283 445 0 7643 36 0 0 chr10 32055796 32056713 -108260052 - L1PA5 LINE L1 -5 6149 5232 2064 132 0 11 chr10 32057046 32057400 -108259365 + AluSx SINE Alu 1 351 0 1690 178 3 23 chr10 32057421 32057724 -108259041 - AluJo SINE Alu -10 302 6 2165 115 0 10 chr10 32058399 32058703 -108258062 + AluSc SINE Alu 1 301 -8 1550 160 167 14 chr10 32058913 32059207 -108257558 - MER1B DNA MER1_type 0 339 1 519 45 0 0 chr10 32059635 32059701 -108257064 + (GA)n Simple_repeat Simple_repeat 1 66 0 1534 260 63 5 chr10 32060078 32060493 -108256272 - LTR16C LTR ERVL 0 491 53 2238 136 0 0 chr10 32060769 32061079 -108255686 + AluSx SINE Alu 1 310 -2 243 88 0 0 chr10 32061141 32061175 -108255590 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 471 357 23 23 chr10 32061440 32061706 -108255059 - HAL1 LINE L1 -1260 1247 982 2288 82 36 13 chr10 32061891 32062196 -108254569 - AluSq SINE Alu -1 312 1 2175 78 3 7 chr10 32062276 32062559 -108254206 - AluY SINE Alu -29 282 1 592 266 111 24 chr10 32062601 32062808 -108253957 + MIR SINE MIR 38 262 0 7144 90 18 2 chr10 32063035 32064477 -108252288 + L1PA8A LINE L1 4293 5756 -375 3754 90 2 10 chr10 32064530 32065051 -108251714 + L1PA10 LINE L1 5642 6158 -10 985 178 37 5 chr10 32065084 32065275 -108251490 - MLT1D LTR MaLR -308 197 1 639 147 0 0 chr10 32066003 32066098 -108250667 + FLAM_C SINE Alu 31 125 -18 1657 155 11 11 chr10 32066432 32066710 -108250055 + AluJo SINE Alu 1 278 -34 2451 82 0 3 chr10 32068336 32068642 -108248123 - AluSx SINE Alu -7 305 1 327 176 47 47 chr10 32069084 32069169 -108247596 - MLT1K LTR MaLR -39 549 465 2484 74 0 10 chr10 32069761 32070070 -108246695 + AluY SINE Alu 1 306 -5 2179 117 10 7 chr10 32070930 32071239 -108245526 + AluSx SINE Alu 1 310 -2 1072 146 6 0 chr10 32071244 32071402 -108245363 + FRAM SINE Alu 4 162 -14 208 0 62 0 chr10 32071853 32071885 -108244880 + (TTTTTA)n Simple_repeat Simple_repeat 2 35 0 6461 72 25 55 chr10 32072724 32073703 -108243062 - SVA Other Other -4 1382 433 5747 82 20 53 chr10 32073718 32074612 -108242153 - SVA Other Other -520 866 2 190 111 0 37 chr10 32074613 32074667 -108242098 + (GGGAGA)n Simple_repeat Simple_repeat 1 52 0 2269 106 7 0 chr10 32074809 32075110 -108241655 - AluSx SINE Alu -7 305 3 900 102 6 113 chr10 32075123 32075300 -108241465 - L1PB3 LINE L1 -1 6153 5996 1859 153 46 0 chr10 32075829 32076110 -108240655 + AluSx SINE Alu 1 294 -18 1283 142 52 78 chr10 32076163 32076431 -108240334 - AluJo SINE Alu -19 293 33 351 119 0 0 chr10 32076588 32076655 -108240110 + (TATG)n Simple_repeat Simple_repeat 2 68 0 710 246 87 5 chr10 32077294 32077501 -108239264 + MIR SINE MIR 5 228 -34 929 70 86 0 chr10 32077505 32077633 -108239132 + MER85 DNA T2_type 1 139 0 764 183 0 30 chr10 32077785 32077916 -108238849 + FLAM_C SINE Alu 3 129 -14 200 169 0 17 chr10 32077920 32077979 -108238786 + (TA)n Simple_repeat Simple_repeat 1 58 0 294 258 149 46 chr10 32078027 32078221 -108238544 - MIR SINE MIR 0 262 49 2651 40 0 0 chr10 32079065 32079363 -108237402 + AluY SINE Alu 1 298 -13 38 22 0 0 chr10 32079942 32079987 -108236778 + AT_rich Low_complexity Low_complexity 1 45 0 2324 98 0 3 chr10 32080992 32081297 -108235468 + AluSg SINE Alu 1 304 -6 437 259 136 7 chr10 32081306 32081453 -108235312 + MIR3 SINE MIR 37 202 -6 3666 115 72 36 chr10 32082667 32082882 -108233883 - LTR34 LTR ERV1 0 699 493 1675 151 70 7 chr10 32082882 32083166 -108233599 - AluSx SINE Alu -10 302 1 3666 115 72 36 chr10 32083166 32083612 -108233153 - LTR34 LTR ERV1 -206 493 14 370 256 78 23 chr10 32084540 32084669 -108232096 + L3 LINE CR1 1321 1456 -121 1102 113 40 17 chr10 32084674 32084851 -108231914 + MER4D LTR ERV1 1 181 -722 5352 124 12 10 chr10 32084851 32085657 -108231108 + L1PA15 LINE L1 5350 6157 -8 3355 142 65 73 chr10 32085657 32086353 -108230412 + MER4D LTR ERV1 183 872 0 3151 120 8 112 chr10 32086968 32087609 -108229156 + MER4B LTR ERV1 1 574 -36 479 237 0 52 chr10 32088047 32088182 -108228583 + L2 LINE L2 3180 3307 -6 200 182 0 0 chr10 32089089 32089122 -108227643 + CT-rich Low_complexity Low_complexity 2 34 0 393 22 0 0 chr10 32089125 32089171 -108227594 + (CA)n Simple_repeat Simple_repeat 2 47 0 2367 112 0 0 chr10 32089637 32089941 -108226824 - AluSx SINE Alu -8 304 1 181 296 57 23 chr10 32090180 32090268 -108226497 + L2 LINE L2 2954 3044 -228 1637 179 14 21 chr10 32090392 32090677 -108226088 - AluJo SINE Alu -29 283 1 391 169 48 0 chr10 32090682 32090765 -108226000 - L1PA16 LINE L1 -1 6165 6079 1052 156 0 11 chr10 32090855 32091034 -108225731 + AluJb SINE Alu 134 310 -2 206 31 0 31 chr10 32091346 32091378 -108225387 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 2111 111 4 0 chr10 32091378 32091657 -108225108 - AluSx SINE Alu -32 280 1 3724 111 23 6 chr10 32092002 32092517 -108224248 + MER1A DNA MER1_type 4 527 0 1604 152 17 52 chr10 32092861 32093150 -108223615 + AluJo SINE Alu 2 280 -32 3422 105 8 10 chr10 32094272 32094766 -108221999 - LOR1a LTR ERV1 0 497 5 1375 225 37 34 chr10 32095064 32095362 -108221403 - AluJo SINE Alu -2 300 2 2043 185 50 46 chr10 32095457 32095960 -108220805 + MLT1D LTR MaLR 1 505 0 206 266 78 0 chr10 32096114 32096178 -108220587 + L2 LINE L2 3208 3276 -37 1733 170 17 17 chr10 32096243 32096532 -108220233 - AluJb SINE Alu -23 289 1 1785 121 83 78 chr10 32096776 32096975 -108219790 + THE1C LTR MaLR 1 204 -171 225 0 0 0 chr10 32096975 32097000 -108219765 + (TC)n Simple_repeat Simple_repeat 1 25 0 1785 121 83 78 chr10 32097000 32097173 -108219592 + THE1C LTR MaLR 204 375 0 2079 128 0 0 chr10 32097367 32097680 -108219085 + AluSx SINE Alu 1 313 0 244 360 84 27 chr10 32097682 32097943 -108218822 - L2 LINE L2 -20 3252 2977 209 280 20 0 chr10 32097943 32097993 -108218772 - L2 LINE L2 -12 3260 3210 22 0 0 0 chr10 32098001 32098023 -108218742 + AT_rich Low_complexity Low_complexity 1 22 0 694 169 8 0 chr10 32098078 32098196 -108218569 - AluJb SINE Alu -1 311 193 1042 245 32 0 chr10 32098251 32098467 -108218298 - MER58A DNA MER1_type -1 223 1 1834 178 3 3 chr10 32100440 32100744 -108216021 - AluJo SINE Alu -7 305 2 734 282 61 69 chr10 32100889 32101631 -108215134 + L2 LINE L2 2539 3283 -30 2277 115 0 0 chr10 32101804 32102099 -108214666 + AluSx SINE Alu 1 295 -17 380 127 0 0 chr10 32102323 32102378 -108214387 - Alu SINE Alu -6 296 242 2088 221 74 46 chr10 32102651 32102707 -108214058 - L1ME1 LINE L1 -5 6161 6108 1709 183 7 17 chr10 32102707 32103008 -108213757 - AluJo SINE Alu -14 298 1 2088 221 74 46 chr10 32103008 32103602 -108213163 - L1ME1 LINE L1 -58 6108 5493 662 62 0 0 chr10 32103604 32103685 -108213080 - THE1B LTR MaLR 0 364 284 474 54 0 0 chr10 32103685 32103741 -108213024 - THE1B LTR MaLR -308 56 1 1249 165 0 19 chr10 32104358 32104564 -108212201 + AluJb SINE Alu 1 202 -110 2291 85 3 0 chr10 32104751 32105064 -108211701 - AluY SINE Alu 0 314 1 1703 139 68 25 chr10 32105326 32105607 -108211158 - AluJo SINE Alu -6 306 14 243 229 0 0 chr10 32105840 32105901 -108210864 + (TATG)n Simple_repeat Simple_repeat 3 63 0 1791 102 124 0 chr10 32106926 32107191 -108209574 + AluSx SINE Alu 5 302 0 1935 144 0 7 chr10 32107465 32107749 -108209016 - AluJo SINE Alu -30 282 1 216 0 0 0 chr10 32107777 32107801 -108208964 + (TG)n Simple_repeat Simple_repeat 2 25 0 191 303 0 15 chr10 32108297 32108363 -108208402 - L2 LINE L2 -214 3058 2994 804 172 0 8 chr10 32108616 32108750 -108208015 + FLAM_C SINE Alu 1 133 0 2367 94 0 0 chr10 32109395 32109693 -108207072 - AluSc SINE Alu -11 298 1 1707 168 18 4 chr10 32109976 32110250 -108206515 - AluJb SINE Alu -34 278 1 1626 178 34 20 chr10 32110250 32110543 -108206222 - AluJo SINE Alu -15 297 1 1673 186 10 10 chr10 32111798 32112105 -108204660 - AluJb SINE Alu -5 307 1 183 143 29 0 chr10 32113056 32113091 -108203674 + MER5A DNA MER1_type 1 36 -153 215 269 104 0 chr10 32113291 32113358 -108203407 - L2 LINE L2 -1 3312 3239 521 278 44 28 chr10 32113436 32113616 -108203149 + MIR SINE MIR 6 188 -74 2401 156 44 29 chr10 32113696 32114150 -108202615 - LOR1b LTR ERV1 0 461 1 898 180 4 146 chr10 32114341 32114411 -108202354 + L1MB8 LINE L1 3909 3987 -2159 2025 114 40 3 chr10 32114411 32114709 -108202056 + AluSc SINE Alu 1 309 0 898 180 4 146 chr10 32114709 32114884 -108201881 + L1MB8 LINE L1 3987 4119 -2027 2815 178 34 38 chr10 32114884 32114907 -108201858 + MLT2B3 LTR ERVL 1 23 -531 2270 180 36 79 chr10 32114907 32115486 -108201279 + MLT2B3 LTR ERVL 1 554 0 2815 178 34 38 chr10 32115486 32116018 -108200747 + MLT2B3 LTR ERVL 23 554 0 4566 192 56 37 chr10 32116020 32117074 -108199691 + L1MB8 LINE L1 4117 5149 -1029 2193 134 132 5 chr10 32117074 32117454 -108199311 - MSTA LTR MaLR 0 428 1 786 139 23 8 chr10 32117454 32117583 -108199182 + FLAM_C SINE Alu 1 131 -2 4566 192 56 37 chr10 32117583 32118540 -108198225 + L1MB8 LINE L1 5148 6165 -13 255 31 0 0 chr10 32118545 32118577 -108198188 + (TG)n Simple_repeat Simple_repeat 2 33 0 568 284 209 48 chr10 32118603 32118934 -108197831 - L2 LINE L2 -799 2515 2239 315 0 0 0 chr10 32118934 32118969 -108197796 + (GA)n Simple_repeat Simple_repeat 2 36 0 568 284 209 48 chr10 32118969 32119282 -108197483 - L2 LINE L2 -1075 2239 1767 1085 195 108 16 chr10 32119656 32119907 -108196858 - AluJo SINE Alu -25 287 14 2168 172 34 3 chr10 32120439 32120823 -108195942 - MSTD LTR MaLR 0 396 1 1564 169 0 69 chr10 32121411 32121730 -108195035 - AluJo SINE Alu -15 297 1 2230 138 25 30 chr10 32122524 32122923 -108193842 - L1MB4 LINE L1 -2 6178 5782 1645 129 75 0 chr10 32123837 32124092 -108192673 + AluJb SINE Alu 11 284 -28 201 39 0 0 chr10 32124092 32124118 -108192647 + (CATA)n Simple_repeat Simple_repeat 2 27 0 1570 155 3 73 chr10 32124417 32124720 -108192045 - AluJo SINE Alu -22 290 9 2313 71 0 4 chr10 32125294 32125619 -108191146 - AluY SINE Alu 0 324 1 213 94 0 0 chr10 32126575 32126607 -108190158 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 1488 195 18 18 chr10 32126609 32126891 -108189874 - AluJo SINE Alu -30 282 1 2030 39 9 0 chr10 32126905 32127135 -108189630 - AluY SINE Alu -14 297 66 458 238 43 49 chr10 32127692 32127856 -108188909 + MIR SINE MIR 100 262 0 1095 74 0 29 chr10 32127891 32128066 -108188699 + (TTTC)n Simple_repeat Simple_repeat 3 172 0 1594 172 8 11 chr10 32128071 32128333 -108188432 - AluJo SINE Alu -39 273 13 2073 128 3 0 chr10 32128648 32128938 -108187827 + AluSx SINE Alu 1 291 -21 496 213 86 75 chr10 32128994 32129168 -108187597 + MLT1C LTR MaLR 7 182 -285 180 0 0 0 chr10 32129310 32129330 -108187435 + (CAT)n Simple_repeat Simple_repeat 2 21 0 395 294 14 46 chr10 32129434 32129652 -108187113 + L1MC5 LINE L1 7010 7220 -741 511 298 57 20 chr10 32129786 32130135 -108186630 + L1MC5 LINE L1 7272 7633 -328 420 147 0 0 chr10 32130174 32130242 -108186523 - MIR SINE MIR -174 88 21 233 188 62 31 chr10 32130260 32130324 -108186441 + MIR SINE MIR 124 189 -73 229 315 34 0 chr10 32130987 32131076 -108185689 + L1MC4 LINE L1 7781 7872 -170 1572 193 7 10 chr10 32131163 32131459 -108185306 + AluJo SINE Alu 13 307 -5 349 326 49 21 chr10 32131894 32132038 -108184727 + MLT1I LTR MaLR 9 156 -253 679 150 32 0 chr10 32132122 32132382 -108184383 + CT-rich Low_complexity Low_complexity 1 268 0 267 122 41 0 chr10 32132385 32132434 -108184331 + MLT1I LTR MaLR 345 395 -14 614 279 14 19 chr10 32132573 32132781 -108183984 - MIR SINE MIR -55 207 1 447 308 27 0 chr10 32133305 32133451 -108183314 - MIR SINE MIR -75 187 38 1698 159 16 29 chr10 32133989 32134217 -108182548 + AluJo SINE Alu 1 230 -82 2375 115 62 3 chr10 32134217 32134573 -108182192 - MER51B LTR ERV1 0 377 1 1698 159 16 29 chr10 32134573 32134642 -108182123 + AluJo SINE Alu 230 296 -16 2684 48 0 0 chr10 32134642 32134951 -108181814 + AluY SINE Alu 1 309 -2 1698 159 16 29 chr10 32134951 32134967 -108181798 + AluJo SINE Alu 296 311 -1 23 0 0 0 chr10 32135560 32135583 -108181182 + AT_rich Low_complexity Low_complexity 1 23 0 358 277 28 68 chr10 32135585 32135762 -108181003 - L1MC5 LINE L1 -48 7913 7744 2077 95 81 0 chr10 32136585 32136869 -108179896 + AluSq SINE Alu 1 307 -6 8803 200 58 36 chr10 32137485 32137757 -108179008 + L1MDa LINE L1 25 289 -6251 857 122 0 30 chr10 32137757 32137888 -108178877 + FLAM_C SINE Alu 5 131 -2 8803 200 58 36 chr10 32137888 32139616 -108177149 + L1MDa LINE L1 289 2253 -4287 1536 200 3 32 chr10 32139616 32139931 -108176834 + AluJo SINE Alu 2 307 -5 8803 200 58 36 chr10 32139931 32140656 -108176109 + L1MDa LINE L1 2253 2960 -3580 431 272 16 0 chr10 32140661 32140786 -108175979 - L1M4 LINE L1 -3070 3076 2950 2448 182 8 45 chr10 32140803 32141319 -108175446 + L1MD1 LINE L1 5746 6242 0 882 143 7 0 chr10 32141327 32141467 -108175298 + FAM SINE Alu 18 158 -27 28 29 0 0 chr10 32141471 32141506 -108175259 + AT_rich Low_complexity Low_complexity 1 35 0 192 216 78 20 chr10 32141867 32141918 -108174847 - L3 LINE CR1 -262 1315 1262 256 268 52 41 chr10 32142052 32142149 -108174616 + L2 LINE L2 2986 3083 -189 202 255 20 39 chr10 32142247 32142264 -108174501 + L2 LINE L2 3197 3213 -59 576 201 214 0 chr10 32142264 32142418 -108174347 + MER5A DNA MER1_type 3 189 0 202 255 20 39 chr10 32142418 32142451 -108174314 + L2 LINE L2 3213 3246 -26 1934 128 30 3 chr10 32142840 32143144 -108173621 + AluSx SINE Alu 1 312 0 1843 141 0 3 chr10 32143167 32143451 -108173314 + AluJb SINE Alu 1 283 -29 279 0 0 0 chr10 32143454 32143485 -108173280 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 1618 180 10 10 chr10 32144173 32144468 -108172297 - AluJo SINE Alu -13 299 5 2163 103 3 0 chr10 32145087 32145388 -108171377 + AluSg SINE Alu 1 302 -8 257 51 26 0 chr10 32145479 32145518 -108171247 + (GA)n Simple_repeat Simple_repeat 2 41 0 401 341 22 0 chr10 32146706 32146841 -108169924 + MIR3 SINE MIR 64 201 -7 546 302 112 6 chr10 32147166 32147345 -108169420 - MIR SINE MIR -10 252 55 208 308 46 0 chr10 32147417 32147482 -108169283 + L2 LINE L2 2717 2784 -530 269 274 110 122 chr10 32147532 32147617 -108169148 + L2 LINE L2 2945 3030 -242 1312 200 7 122 chr10 32147617 32148027 -108168738 + MLT1A1 LTR MaLR 3 365 0 269 274 110 122 chr10 32148027 32148269 -108168496 + L2 LINE L2 3030 3268 -4 2170 97 0 0 chr10 32148621 32148910 -108167855 - AluSg1 SINE Alu -18 291 3 370 140 0 0 chr10 32149110 32149167 -108167598 + FLAM SINE Alu 76 132 -1 272 287 153 7 chr10 32149781 32149931 -108166834 - MIR3 SINE MIR -7 201 30 23 0 0 0 chr10 32150155 32150178 -108166587 + AT_rich Low_complexity Low_complexity 1 23 0 1759 128 0 75 chr10 32150181 32150501 -108166264 + AluSx SINE Alu 1 296 -16 591 249 37 16 chr10 32151000 32151189 -108165576 + L1MC/D LINE L1 5569 5761 -2047 * 1735 130 0 4 chr10 32151186 32151448 -108165317 - MSTA-int LTR MaLR -1390 261 1 2104 148 65 32 chr10 32151450 32151807 -108164958 - MSTA LTR MaLR -2 426 52 1696 189 3 0 chr10 32151807 32152108 -108164657 - AluJo SINE Alu -10 302 1 2104 148 65 32 chr10 32152108 32152162 -108164603 - MSTA LTR MaLR -376 52 1 1540 280 48 46 chr10 32152162 32152745 -108164020 - L2 LINE L2 -445 2869 2286 556 261 71 114 chr10 32152784 32152798 -108163967 - MLT1J LTR MaLR -8 503 490 2504 104 11 8 chr10 32152798 32153152 -108163613 + THE1A LTR MaLR 1 355 0 556 261 71 114 chr10 32153152 32153470 -108163295 - MLT1J LTR MaLR -21 490 190 1862 154 0 0 chr10 32153470 32153763 -108163002 - AluJo SINE Alu -4 308 16 556 261 71 114 chr10 32153763 32153851 -108162914 - MLT1J LTR MaLR -321 190 100 199 277 43 0 chr10 32153922 32153969 -108162796 - L2 LINE L2 -1078 2236 2188 211 270 27 14 chr10 32154271 32154345 -108162420 + GA-rich Low_complexity Low_complexity 1 75 0 1821 163 13 56 chr10 32155408 32155800 -108160965 + THE1C LTR MaLR 1 375 0 619 312 28 0 chr10 32155803 32156053 -108160712 - L1MC4 LINE L1 -981 7061 6805 1984 113 0 64 chr10 32157878 32158205 -108158560 - AluSq SINE Alu -7 306 1 2154 102 0 0 chr10 32158727 32159058 -108157707 + AluSx SINE Alu 1 331 0 431 294 154 21 chr10 32159522 32159654 -108157111 - L2 LINE L2 -134 3179 3066 2182 93 7 7 chr10 32159654 32159955 -108156810 - AluSx SINE Alu -11 301 1 431 294 154 21 chr10 32159955 32160256 -108156509 - L2 LINE L2 -247 3066 2806 1597 176 7 23 chr10 32160256 32160558 -108156207 + AluJo SINE Alu 4 300 -12 1819 123 87 0 chr10 32160558 32160834 -108155931 + AluSx SINE Alu 1 300 -12 431 294 154 21 chr10 32160834 32160943 -108155822 - L2 LINE L2 -506 2807 2554 267 157 50 0 chr10 32161024 32161135 -108155630 + CT-rich Low_complexity Low_complexity 1 116 0 927 277 131 56 chr10 32161158 32161212 -108155553 - L2 LINE L2 -918 2396 2347 505 278 5 97 chr10 32161212 32161428 -108155337 - MER91A DNA MER1_type 0 196 1 927 277 131 56 chr10 32161428 32161594 -108155171 - L2 LINE L2 -967 2347 2195 2186 103 0 13 chr10 32161594 32161906 -108154859 - AluSc SINE Alu 0 309 2 927 277 131 56 chr10 32161906 32162417 -108154348 - L2 LINE L2 -1119 2195 1609 232 235 265 0 chr10 32162435 32162605 -108154160 - L2 LINE L2 -1811 1503 1289 195 69 0 0 chr10 32162786 32162815 -108153950 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 186 270 16 16 chr10 32163017 32163080 -108153685 - MIR SINE MIR -21 241 179 252 285 70 12 chr10 32163216 32163388 -108153377 + L1ME4a LINE L1 5269 5450 -712 1039 99 0 52 chr10 32163461 32163633 -108153132 - AluSg/x SINE Alu -16 294 132 395 273 150 31 chr10 32163633 32163881 -108152884 + L1ME4a LINE L1 5549 5766 -355 1465 196 32 54 chr10 32163881 32164254 -108152511 + MLT1A1 LTR MaLR 1 365 0 395 273 150 31 chr10 32164254 32164517 -108152248 + L1ME4a LINE L1 5766 6121 0 1170 171 5 0 chr10 32164542 32164735 -108152030 - AluJo SINE Alu -118 194 1 224 207 103 69 chr10 32164983 32165070 -108151695 + L2 LINE L2 3183 3272 0 275 236 144 109 chr10 32165162 32165336 -108151429 + MER5A DNA MER1_type 10 189 0 2146 119 0 0 chr10 32165362 32165656 -108151109 - AluSx SINE Alu -18 294 1 224 39 0 0 chr10 32165828 32165854 -108150911 + (T)n Simple_repeat Simple_repeat 1 26 0 357 203 27 0 chr10 32166739 32166813 -108149952 - MER34 LTR ERV1 -22 520 445 230 192 77 0 chr10 32166825 32166877 -108149888 - LTR48 LTR ERV1 -118 669 614 338 258 39 45 chr10 32166917 32167072 -108149693 - LTR48B LTR ERV1 -350 294 141 * 410 261 8 25 chr10 32167051 32167170 -108149595 - MER34 LTR ERV1 -423 119 3 308 83 21 0 chr10 32167309 32167357 -108149408 + (TC)n Simple_repeat Simple_repeat 1 49 0 1895 134 40 0 chr10 32167357 32167656 -108149109 - AluSx SINE Alu -1 311 1 393 320 63 40 chr10 32167978 32168200 -108148565 + MIR SINE MIR 2 228 -34 2030 105 0 20 chr10 32168286 32168582 -108148183 - AluSx SINE Alu -22 290 1 1727 155 10 13 chr10 32169371 32169675 -108147090 + AluJo SINE Alu 1 303 -9 2091 125 0 0 chr10 32169968 32170280 -108146485 + AluSx SINE Alu 1 312 0 636 278 44 31 chr10 32172304 32172531 -108144234 + MLT1H LTR MaLR 2 231 -318 356 277 57 34 chr10 32172649 32172826 -108143939 - MLT1G LTR MaLR 0 590 410 331 265 34 26 chr10 32173012 32173129 -108143636 - MLT1G LTR MaLR -462 128 11 1957 138 0 3 chr10 32173285 32173615 -108143150 + AluSx SINE Alu 1 329 0 2235 165 41 13 chr10 32174101 32174562 -108142203 - MER101 LTR ERV1 0 474 1 478 217 0 57 chr10 32174579 32174685 -108142080 - L1M3 LINE L1 -400 5783 5684 797 285 88 40 chr10 32175004 32175577 -108141188 + MLT1G LTR MaLR 17 590 0 1370 263 25 28 chr10 32175816 32176173 -108140592 - MER115 DNA AcHobo 0 693 338 565 230 35 67 chr10 32176345 32176570 -108140195 - MER77 LTR ERV1 -4 601 414 33 0 0 0 chr10 32176720 32176753 -108140012 + AT_rich Low_complexity Low_complexity 1 33 0 1936 107 0 0 chr10 32177376 32177648 -108139117 + AluSq SINE Alu 31 302 -11 1676 153 4 14 chr10 32177814 32178095 -108138670 - AluJb SINE Alu -34 278 1 367 300 8 39 chr10 32178096 32178226 -108138539 - MIR SINE MIR -9 253 128 306 170 0 0 chr10 32178300 32178353 -108138412 - L2 LINE L2 0 3313 3261 379 268 115 129 chr10 32178721 32179139 -108137626 - L3 LINE CR1 -22 1555 1144 1045 168 0 0 chr10 32179490 32179657 -108137108 - AluJb SINE Alu -18 294 128 2167 104 10 0 chr10 32179797 32180094 -108136671 - AluSx SINE Alu -12 300 1 614 274 58 53 chr10 32180191 32180417 -108136348 + MER115 DNA AcHobo 338 564 -129 2025 117 9 27 chr10 32180464 32180798 -108135967 - L1PA14 LINE L1 0 6161 5834 772 200 0 0 chr10 32180824 32180978 -108135787 - FLAM_C SINE Alu 0 157 4 21 0 0 0 chr10 32181179 32181200 -108135565 + AT_rich Low_complexity Low_complexity 1 21 0 2209 88 7 0 chr10 32181297 32181603 -108135162 + AluY SINE Alu 1 308 -3 194 143 18 125 chr10 32181605 32181661 -108135104 - L3b LINE CR1 -10 1573 1524 292 231 30 127 chr10 32181939 32182073 -108134692 - MIR SINE MIR -79 183 63 484 106 39 7 chr10 32182908 32183126 -108133639 + (TCCA)n Simple_repeat Simple_repeat 1 293 0 579 144 50 9 chr10 32183162 32183388 -108133377 + (TCCA)n Simple_repeat Simple_repeat 1 235 0 673 133 38 14 chr10 32183410 32183707 -108133058 + (TCCA)n Simple_repeat Simple_repeat 1 304 0 195 343 14 14 chr10 32183716 32183786 -108132979 - MIR SINE MIR -105 157 88 937 206 161 0 chr10 32184691 32184934 -108131831 + AluSx SINE Alu 1 282 -30 347 0 0 23 chr10 32184938 32184982 -108131783 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 614 189 18 0 chr10 32185037 32185148 -108131617 - MER81 DNA DNA 0 114 2 385 253 156 13 chr10 32186719 32186830 -108129935 - MIR SINE MIR -1 261 121 1539 192 4 4 chr10 32186830 32187111 -108129654 - AluJb SINE Alu -19 293 13 385 253 156 13 chr10 32187111 32187153 -108129612 - MIR SINE MIR -141 121 86 266 309 164 14 chr10 32187187 32187407 -108129358 - L3b LINE CR1 -152 1431 1179 26 30 0 0 chr10 32187972 32188005 -108128760 + AT_rich Low_complexity Low_complexity 1 33 0 311 394 0 8 chr10 32188908 32189040 -108127725 + L2 LINE L2 3142 3272 0 769 257 87 9 chr10 32189143 32189361 -108127404 + MIR SINE MIR 22 256 -6 356 0 0 22 chr10 32191508 32191553 -108125212 + (TAA)n Simple_repeat Simple_repeat 2 45 0 257 245 0 0 chr10 32192173 32192226 -108124539 - L1MC5 LINE L1 -1188 6773 6721 254 290 0 0 chr10 32192956 32193025 -108123740 + MIR SINE MIR 187 255 -7 1817 184 13 0 chr10 32193241 32193546 -108123219 + AluJo SINE Alu 1 309 -3 563 228 60 48 chr10 32195144 32195311 -108121454 - MER69A DNA AcHobo -8 169 1 784 140 15 37 chr10 32195929 32196065 -108120700 - FLAM_C SINE Alu 0 133 1 360 264 47 0 chr10 32196521 32196627 -108120138 - MER103 DNA DNA -1 165 55 2189 118 6 10 chr10 32196634 32196947 -108119818 + AluSx SINE Alu 1 312 0 252 327 99 19 chr10 32197537 32197575 -108119190 - MIR SINE MIR -70 192 158 3566 60 4 2 chr10 32197575 32198026 -108118739 - L1PA13 LINE L1 -3 6160 5709 252 327 99 19 chr10 32198026 32198151 -108118614 - MIR SINE MIR -104 158 19 468 252 77 19 chr10 32199753 32199908 -108116857 + LTR37B LTR ERV1 6 169 -299 967 134 47 6 chr10 32199910 32200081 -108116684 + L1MA5 LINE L1 6059 6236 -64 887 160 13 0 chr10 32200081 32200231 -108116534 + MSTB1 LTR MaLR 1 152 -274 1603 137 72 12 chr10 32200338 32200638 -108116127 + MSTB1 LTR MaLR 130 432 0 408 94 31 0 chr10 32200638 32200702 -108116063 + L1MA5 LINE L1 6230 6295 -5 590 223 93 40 chr10 32200777 32201024 -108115741 + LTR37B LTR ERV1 198 457 -11 624 235 65 0 chr10 32202007 32202177 -108114588 + L1PB4 LINE L1 5976 6156 0 1914 167 7 0 chr10 32202268 32202568 -108114197 + AluSx SINE Alu 1 302 -10 21 57 0 0 chr10 32203126 32203161 -108113604 + AT_rich Low_complexity Low_complexity 1 35 0 393 194 15 0 chr10 32203162 32203229 -108113536 + MER45 DNA AcHobo 1513 1580 -1 2222 114 3 19 chr10 32204256 32204573 -108112192 - AluSx SINE Alu 0 312 1 373 294 56 20 chr10 32204652 32204849 -108111916 + MER31-int LTR ERV1 3855 4058 -878 1767 176 58 6 chr10 32205194 32205524 -108111241 + MLT1A1 LTR MaLR 19 365 0 823 205 72 85 chr10 32205524 32205855 -108110910 + LTR37B LTR ERV1 92 418 -50 1912 161 0 7 chr10 32205857 32206155 -108110610 - AluJo SINE Alu -16 296 1 5855 184 37 6 chr10 32206411 32207664 -108109101 - L1 LINE L1 -1715 4431 3140 2140 81 36 32 chr10 32207787 32208096 -108108669 - AluSg SINE Alu 0 310 1 1080 239 11 11 chr10 32209186 32209446 -108107319 - MIR SINE MIR 0 262 3 210 345 0 0 chr10 32209470 32209525 -108107240 + L2 LINE L2 3251 3305 -8 951 233 43 0 chr10 32210355 32210565 -108106200 + MER58A DNA MER1_type 2 220 -4 259 126 0 0 chr10 32212311 32212350 -108104415 + AluSp SINE Alu 137 170 -133 1608 167 24 20 chr10 32212355 32212648 -108104117 + AluJo SINE Alu 15 308 -4 379 315 95 45 chr10 32213695 32214054 -108102711 - L2 LINE L2 -571 2743 2367 1079 141 18 12 chr10 32214307 32214477 -108102288 + AluJb SINE Alu 126 296 -16 265 302 63 50 chr10 32214818 32214977 -108101788 + MLT1K LTR MaLR 198 358 -230 3802 177 43 55 chr10 32215165 32215463 -108101302 - L1MB7 LINE L1 -15 6169 5869 2239 193 39 55 chr10 32215463 32215504 -108101261 - MLT2B3 LTR ERVL 0 554 514 351 0 0 0 chr10 32215504 32215543 -108101222 + (TA)n Simple_repeat Simple_repeat 2 40 0 2239 193 39 55 chr10 32215543 32216062 -108100703 - MLT2B3 LTR ERVL -40 514 3 3802 177 43 55 chr10 32216062 32216968 -108099797 - L1MB7 LINE L1 -315 5869 4973 411 254 16 8 chr10 32217094 32217216 -108099549 - MER103 DNA DNA -10 156 34 1204 304 68 2 chr10 32217261 32217573 -108099192 + LTR16A LTR ERVL 25 370 -80 573 15 0 0 chr10 32217573 32217639 -108099126 + (TTCCC)n Simple_repeat Simple_repeat 1 66 0 1204 304 68 2 chr10 32217639 32217721 -108099044 + LTR16A LTR ERVL 370 445 -5 465 269 0 0 chr10 32218015 32218123 -108098642 + L2 LINE L2 3201 3308 -5 1006 105 7 20 chr10 32218369 32218522 -108098243 - AluSg/x SINE Alu -13 297 147 316 208 26 52 chr10 32218625 32218702 -108098063 - MER20 DNA MER1_type -142 77 3 921 222 124 50 chr10 32218785 32219167 -108097598 - MLT1G LTR MaLR 0 530 129 2086 137 10 0 chr10 32219176 32219475 -108097290 - AluSx SINE Alu -10 302 1 1970 92 81 18 chr10 32220101 32220374 -108096391 - AluSx SINE Alu -22 290 1 2064 128 0 41 chr10 32220502 32220821 -108095944 - AluSx SINE Alu -6 306 1 814 173 27 129 chr10 32221223 32221518 -108095247 + MER33 DNA MER1_type 6 270 -54 333 174 14 0 chr10 32221558 32221627 -108095138 + MER33 DNA MER1_type 272 341 -22 204 260 0 0 chr10 32221985 32222035 -108094730 - L2 LINE L2 -1 3312 3263 554 233 171 29 chr10 32223042 32223351 -108093414 - L1MC4 LINE L1 0 8042 7690 216 0 0 0 chr10 32223406 32223430 -108093335 + (T)n Simple_repeat Simple_repeat 1 24 0 739 225 7 0 chr10 32223478 32223629 -108093136 + MER34 LTR ERV1 1 152 -390 2169 141 0 0 chr10 32223629 32223928 -108092837 + AluSq SINE Alu 1 299 -14 1151 108 0 0 chr10 32223930 32224105 -108092660 + AluSq SINE Alu 139 313 0 490 121 52 69 chr10 32224117 32224233 -108092532 - L1ME1 LINE L1 -146 6020 5907 254 240 20 0 chr10 32225159 32225209 -108091556 + MER5A DNA MER1_type 1 51 -138 1187 232 111 24 chr10 32225211 32225709 -108091056 - MLT1F LTR MaLR -2 540 9 597 177 24 0 chr10 32225725 32225849 -108090916 + MER5A DNA MER1_type 61 187 -2 1032 184 63 16 chr10 32226001 32226416 -108090349 + MLT1D LTR MaLR 5 505 0 2168 129 39 3 chr10 32226696 32227029 -108089736 - MSTA LTR MaLR -83 345 1 993 214 68 93 chr10 32227054 32227376 -108089389 - MER77 LTR ERV1 -240 365 52 1778 133 0 66 chr10 32227694 32227995 -108088770 - AluJb SINE Alu -31 281 1 422 259 203 39 chr10 32228220 32228506 -108088259 + L3 LINE CR1 430 762 -815 1879 148 0 23 chr10 32228509 32228813 -108087952 + AluJo SINE Alu 1 297 -15 807 108 0 0 chr10 32228881 32229001 -108087764 + (TA)n Simple_repeat Simple_repeat 1 120 0 1035 290 148 21 chr10 32229159 32229680 -108087085 + L3 LINE CR1 872 1458 -119 453 269 12 66 chr10 32231331 32231498 -108085267 + MER5B DNA MER1_type 21 178 0 228 178 0 22 chr10 32231853 32231898 -108084867 + MIR SINE MIR 97 140 -68 2561 110 16 14 chr10 32232325 32232688 -108084077 + THE1B LTR MaLR 1 364 0 288 237 150 63 chr10 32233451 32233658 -108083107 - L2 LINE L2 -5 3308 3084 204 229 0 21 chr10 32234035 32234083 -108082682 + GA-rich Low_complexity Low_complexity 3 49 0 29 132 0 0 chr10 32234425 32234478 -108082287 + GC_rich Low_complexity Low_complexity 1 53 0 383 270 9 47 chr10 32234704 32234961 -108081804 + GA-rich Low_complexity Low_complexity 1 247 0 340 256 36 22 chr10 32235975 32236112 -108080653 + MIR3 SINE MIR 21 159 -49 1715 158 17 20 chr10 32237202 32237494 -108079271 - AluJb SINE Alu -21 291 1 312 299 19 0 chr10 32237494 32237601 -108079164 - L2 LINE L2 -12 3301 3193 211 304 88 0 chr10 32237782 32237907 -108078858 + MIR SINE MIR 120 255 -7 370 250 42 17 chr10 32238287 32238407 -108078358 + MIR SINE MIR 62 184 -78 2294 161 3 6 chr10 32238531 32238897 -108077868 - MLT1A1 LTR MaLR 0 365 1 1509 182 10 23 chr10 32239270 32239577 -108077188 + AluJo SINE Alu 1 303 -9 2278 131 103 5 chr10 32239584 32239974 -108076791 - MSTA LTR MaLR 0 428 1 777 209 78 114 chr10 32240853 32241303 -108075462 + MLT1H LTR MaLR 117 391 -18 733 222 46 42 chr10 32241362 32241591 -108075174 - MLT2D LTR ERVL 0 414 227 1089 138 112 36 chr10 32241635 32241859 -108074906 - AluJo SINE Alu -6 306 66 760 234 47 5 chr10 32241859 32242051 -108074714 - MLT2D LTR ERVL -214 200 1 267 242 121 20 chr10 32242114 32242213 -108074552 + MIR SINE MIR 19 127 -81 1705 137 161 75 chr10 32242519 32242891 -108073874 - MER4A LTR ERV1 0 664 261 580 120 22 0 chr10 32242893 32242985 -108073780 - MER4A LTR ERV1 -570 94 1 392 303 86 41 chr10 32243152 32243442 -108073323 + MLT1K LTR MaLR 124 426 -162 1408 174 8 0 chr10 32243538 32243779 -108072986 - AluJo SINE Alu -30 282 40 1494 186 6 35 chr10 32244488 32244806 -108071959 - AluJo SINE Alu -1 311 3 201 171 24 0 chr10 32245282 32245323 -108071442 + (CA)n Simple_repeat Simple_repeat 2 43 0 232 195 13 39 chr10 32245621 32245698 -108071067 + (TTA)n Simple_repeat Simple_repeat 3 77 0 971 284 77 0 chr10 32246172 32246471 -108070294 + MER69 DNA AcHobo 2 323 -903 270 298 107 51 chr10 32246681 32246859 -108069906 + MIR SINE MIR 17 204 -58 237 276 46 11 chr10 32247022 32247109 -108069656 - MIR SINE MIR -81 127 38 499 292 19 48 chr10 32247247 32247456 -108069309 - MIR SINE MIR -58 204 2 576 219 103 7 chr10 32247809 32247955 -108068810 + MER5B DNA MER1_type 3 162 -16 2029 136 0 17 chr10 32248058 32248359 -108068406 - AluSx SINE Alu -14 298 3 1195 120 6 17 chr10 32248361 32248536 -108068229 - AluJb SINE Alu -6 306 134 2205 123 0 3 chr10 32248536 32248836 -108067929 - AluSx SINE Alu -13 299 1 2222 96 24 0 chr10 32249296 32249588 -108067177 + AluSc SINE Alu 1 299 -10 990 136 116 0 chr10 32249735 32249882 -108066883 + AluSg SINE Alu 1 164 -146 838 138 0 0 chr10 32250282 32250405 -108066360 + FLAM_C SINE Alu 3 125 -8 1710 142 3 88 chr10 32251382 32251721 -108065044 - AluJo SINE Alu -2 310 1 197 306 0 16 chr10 32251791 32251853 -108064912 + MIR SINE MIR 5 65 -197 604 191 49 12 chr10 32251930 32252092 -108064673 - MER96B DNA MER1_type? -242 175 8 342 223 101 34 chr10 32252128 32252276 -108064489 + MIR SINE MIR 91 248 -14 1870 218 48 30 chr10 32253197 32253638 -108063127 + MLT1D LTR MaLR 1 449 -56 1476 128 132 0 chr10 32253638 32253880 -108062885 - AluSx SINE Alu -11 301 28 1952 131 28 3 chr10 32254026 32254309 -108062456 + AluSx SINE Alu 1 290 -22 222 118 0 0 chr10 32254442 32254476 -108062289 + (GGA)n Simple_repeat Simple_repeat 3 36 0 2481 90 0 0 chr10 32255238 32255548 -108061217 + AluSx SINE Alu 1 310 -2 696 271 48 19 chr10 32256309 32256519 -108060246 + MLT1I LTR MaLR 194 409 0 2351 112 0 3 chr10 32256746 32257060 -108059705 + AluSq SINE Alu 1 313 0 200 323 43 32 chr10 32257279 32257372 -108059393 + L2 LINE L2 3143 3236 -36 897 281 42 3 chr10 32257545 32257851 -108058914 + L1ME3A LINE L1 5559 5875 -287 330 230 6 36 chr10 32258400 32258565 -108058200 + CT-rich Low_complexity Low_complexity 3 162 0 2261 114 0 0 chr10 32258643 32259058 -108057707 - AluSx SINE Alu 0 415 1 559 195 24 12 chr10 32259076 32259245 -108057520 + CT-rich Low_complexity Low_complexity 3 173 0 249 210 16 16 chr10 32259279 32259341 -108057424 + CT-rich Low_complexity Low_complexity 1 62 0 455 306 38 10 chr10 32260501 32260710 -108056055 + MIR SINE MIR 23 237 -25 2835 149 50 27 chr10 32260712 32261107 -108055658 + MER1A DNA MER1_type 1 412 -2288 2239 112 0 19 chr10 32261107 32261406 -108055359 + AluSx SINE Alu 1 295 -17 876 108 0 0 chr10 32261406 32261536 -108055229 + (GGAA)n Simple_repeat Simple_repeat 3 132 0 2239 112 0 19 chr10 32261536 32261549 -108055216 + AluSx SINE Alu 295 307 -5 2835 149 50 27 chr10 32261549 32261668 -108055097 + MER1A DNA MER1_type 412 527 0 29 28 0 0 chr10 32261961 32261997 -108054768 + AT_rich Low_complexity Low_complexity 1 36 0 193 148 93 0 chr10 32263366 32263420 -108053345 + (TCTCTG)n Simple_repeat Simple_repeat 2 60 0 1526 186 16 47 chr10 32263822 32264144 -108052621 + AluJo SINE Alu 1 312 0 404 62 49 25 chr10 32264149 32264230 -108052535 + GA-rich Low_complexity Low_complexity 2 84 0 1699 209 98 15 chr10 32264558 32264955 -108051810 + MLT2B1 LTR ERVL 1 430 -90 514 196 11 0 chr10 32264963 32265055 -108051710 - MLT2B1 LTR ERVL -55 465 373 1910 164 30 82 chr10 32265078 32265252 -108051513 - MSTB1 LTR MaLR -12 420 238 2141 130 119 8 chr10 32265252 32265637 -108051128 - MSTA LTR MaLR 0 428 1 1910 164 30 82 chr10 32265637 32265901 -108050864 - MSTB1 LTR MaLR -194 238 5 286 30 0 0 chr10 32265906 32265939 -108050826 + MLT2C1 LTR ERVL 365 397 0 651 282 74 12 chr10 32266252 32266629 -108050136 + L2 LINE L2 2734 3134 -179 591 161 3 22 chr10 32266635 32266766 -108049999 - L1PA16 LINE L1 -122 6034 5913 357 268 27 27 chr10 32266773 32266885 -108049880 + MLT1J2 LTR MaLR 67 178 -272 2004 131 14 14 chr10 32267240 32267530 -108049235 + AluSx SINE Alu 1 290 -22 723 24 0 0 chr10 32267530 32267615 -108049150 + (GGAA)n Simple_repeat Simple_repeat 2 86 0 1153 146 42 42 chr10 32267733 32267973 -108048792 - THE1C LTR MaLR -7 368 129 309 135 0 0 chr10 32268017 32268069 -108048696 + (GGAA)n Simple_repeat Simple_repeat 3 54 0 2474 111 30 52 chr10 32268513 32268920 -108047845 - MER48 LTR ERV1 0 398 1 226 306 138 64 chr10 32268932 32269259 -108047506 + L2 LINE L2 2863 3213 -100 1634 206 25 15 chr10 32269271 32269596 -108047169 - LTR40a LTR ERVL -13 506 179 2194 168 38 33 chr10 32269607 32270157 -108046608 - MLT2A2 LTR ERVL 0 554 1 517 210 169 0 chr10 32270159 32270283 -108046482 - LTR40a LTR ERVL -350 169 25 1417 178 165 3 chr10 32270541 32270856 -108045909 - MER47A DNA MER2_type 0 366 1 353 281 80 61 chr10 32270858 32271373 -108045392 - L1MC4a LINE L1 -109 6012 5554 388 251 164 69 chr10 32271783 32272021 -108044744 + MLT1H LTR MaLR 225 521 -34 2083 107 0 0 chr10 32272021 32272302 -108044463 - AluSg SINE Alu 0 299 19 388 251 164 69 chr10 32272302 32272341 -108044424 + MLT1H LTR MaLR 521 555 0 2587 102 3 24 chr10 32272399 32272771 -108043994 - THE1B LTR MaLR 0 364 1 2208 142 31 0 chr10 32273109 32273462 -108043303 - THE1B LTR MaLR 0 364 1 207 203 0 0 chr10 32274132 32274191 -108042574 + CT-rich Low_complexity Low_complexity 2 60 0 221 366 84 14 chr10 32274192 32274405 -108042360 + L3b LINE CR1 1268 1495 -88 2204 115 0 0 chr10 32274630 32274916 -108041849 - AluSx SINE Alu -26 286 1 318 141 0 127 chr10 32275066 32275137 -108041628 + MLT1E1 LTR MaLR 1 62 -592 2362 93 0 13 chr10 32275763 32276074 -108040691 + AluSx SINE Alu 5 311 -1 2004 125 4 0 chr10 32276452 32276765 -108040000 - AluSx SINE Alu 0 314 1 274 229 66 119 chr10 32276801 32277028 -108039737 - L1MC4 LINE L1 -1 8041 7827 828 263 98 40 chr10 32277084 32277480 -108039285 - L1ME2 LINE L1 -33 6131 5713 2028 138 10 7 chr10 32277662 32277959 -108038806 - AluSx SINE Alu -14 298 1 242 296 45 11 chr10 32278364 32278452 -108038313 + MIR3 SINE MIR 91 181 -27 251 200 0 40 chr10 32278493 32278568 -108038197 + (TATG)n Simple_repeat Simple_repeat 1 72 0 370 315 54 11 chr10 32278625 32278885 -108037880 + L1M4 LINE L1 4799 5069 -1077 1708 168 29 83 chr10 32279410 32279544 -108037221 + MLT1A1 LTR MaLR 1 141 -224 1730 108 0 21 chr10 32279544 32279785 -108036980 + AluSx SINE Alu 64 299 -13 1708 168 29 83 chr10 32279785 32279981 -108036784 + MLT1A1 LTR MaLR 141 310 -55 1974 180 22 32 chr10 32279981 32280381 -108036384 + MSTD LTR MaLR 1 396 0 1708 168 29 83 chr10 32280381 32280435 -108036330 + MLT1A1 LTR MaLR 310 365 0 1687 279 124 58 chr10 32280444 32281336 -108035429 - MER45C DNA AcHobo 0 953 3 1119 215 42 0 chr10 32281764 32282029 -108034736 + MER69 DNA AcHobo 82 357 -2169 1909 223 62 23 chr10 32282381 32283031 -108033734 + MER69 DNA AcHobo 1845 2519 -7 701 167 0 9 chr10 32283315 32283446 -108033319 + AluSg/x SINE Alu 179 310 -308 2041 126 0 0 chr10 32283446 32283731 -108033034 + AluSx SINE Alu 1 285 -27 701 167 0 9 chr10 32283731 32283756 -108033009 + AluSg/x SINE Alu 310 618 0 310 344 117 23 chr10 32285243 32285551 -108031214 + L2 LINE L2 2481 2817 -497 1990 109 18 21 chr10 32285572 32285885 -108030880 - AluSx SINE Alu 0 312 1 457 270 0 0 chr10 32287249 32287349 -108029416 - MER81 DNA DNA 0 114 15 1444 168 47 34 chr10 32287512 32287809 -108028956 - AluJo SINE Alu -11 301 1 671 149 37 0 chr10 32287823 32287930 -108028835 - FLAM_C SINE Alu -19 124 14 2212 114 0 3 chr10 32289509 32289808 -108026957 - AluSx SINE Alu -14 298 1 284 88 123 0 chr10 32290444 32290501 -108026264 - L1MA4A LINE L1 0 6303 6240 1123 70 0 0 chr10 32290585 32290727 -108026038 + L1MA1 LINE L1 6161 6302 0 955 139 48 12 chr10 32291661 32291826 -108024939 + FAM SINE Alu 5 175 0 2521 143 11 28 chr10 32292033 32292363 -108024402 - MSTA LTR MaLR 0 428 105 2340 96 0 7 chr10 32292363 32292666 -108024099 + AluSx SINE Alu 1 301 -11 2521 143 11 28 chr10 32292666 32292770 -108023995 - MSTA LTR MaLR -323 105 1 1058 124 0 68 chr10 32292957 32293134 -108023631 - AluSg/x SINE Alu -19 291 127 1178 245 65 7 chr10 32293214 32293630 -108023135 - Charlie2 DNA MER1_type -5 2857 2418 1063 133 0 0 chr10 32293747 32293905 -108022860 + FRAM SINE Alu 1 151 -25 442 247 123 12 chr10 32295280 32295450 -108021315 + MLT1J LTR MaLR 273 461 -50 2402 113 30 25 chr10 32295457 32295819 -108020946 + THE1B LTR MaLR 1 364 0 464 282 8 8 chr10 32295980 32296097 -108020668 - L2 LINE L2 0 3313 3197 2029 104 7 3 chr10 32296279 32296568 -108020197 + AluSx SINE Alu 12 301 -11 319 205 102 133 chr10 32296731 32296897 -108019868 + L1ME4a LINE L1 5960 6120 -1 2188 139 108 8 chr10 32296915 32297302 -108019463 - MSTA LTR MaLR 0 428 3 1680 265 81 11 chr10 32297337 32297891 -108018874 - L1ME3A LINE L1 -19 6151 5559 209 326 42 32 chr10 32298061 32298156 -108018609 - L2 LINE L2 -34 3279 3184 2134 116 0 3 chr10 32298375 32298676 -108018089 - AluSq SINE Alu -13 300 1 727 294 38 23 chr10 32298903 32299165 -108017600 - MLT1I LTR MaLR 0 409 144 201 365 75 48 chr10 32299298 32299630 -108017135 - L2 LINE L2 -610 2704 2364 1571 154 29 29 chr10 32299926 32300237 -108016528 + AluSx SINE Alu 1 311 -1 1702 164 0 30 chr10 32300308 32300606 -108016159 + AluJb SINE Alu 7 295 -17 28 0 0 0 chr10 32300612 32300640 -108016125 + AT_rich Low_complexity Low_complexity 1 28 0 1806 223 73 62 chr10 32300758 32300884 -108015881 + MLT1E LTR MaLR 2 125 -468 1521 146 4 0 chr10 32300884 32301175 -108015590 + L1MA4 LINE L1 6031 6322 0 1806 223 73 62 chr10 32301175 32301594 -108015171 + MLT1E LTR MaLR 125 554 -39 529 265 59 55 chr10 32301633 32301793 -108014972 - Charlie2 DNA MER1_type -2523 259 96 2015 109 0 3 chr10 32301793 32302086 -108014679 + AluSg SINE Alu 2 293 -17 529 265 59 55 chr10 32302086 32302178 -108014587 - Charlie2 DNA MER1_type -2686 96 6 1553 158 4 18 chr10 32302650 32302928 -108013837 - AluJo SINE Alu -20 292 19 289 236 16 94 chr10 32303016 32303143 -108013622 - L1ME4a LINE L1 -27 6094 5978 233 205 0 0 chr10 32304333 32304372 -108012393 - L2 LINE L2 -13 3300 3262 2027 169 22 17 chr10 32304785 32305147 -108011618 + MLT1A1 LTR MaLR 1 364 -1 1709 147 3 18 chr10 32307414 32307723 -108009042 + AluSx SINE Alu 2 306 0 424 302 23 0 chr10 32308737 32308866 -108007899 - MIR SINE MIR -15 247 116 1951 136 35 43 chr10 32308875 32309305 -108007460 + THE1C LTR MaLR 1 363 -12 263 343 10 30 chr10 32309308 32309407 -108007358 - MIR SINE MIR -150 112 16 472 333 65 14 chr10 32310006 32310282 -108006483 - L2 LINE L2 -15 3298 3009 821 166 7 0 chr10 32310309 32310448 -108006317 + AluJb SINE Alu 160 299 -13 613 261 119 30 chr10 32310448 32310751 -108006014 - L2 LINE L2 -425 2889 2560 453 198 0 55 chr10 32310945 32311036 -108005729 + MER58A DNA MER1_type 9 94 -13 1955 113 32 0 chr10 32311107 32311389 -108005376 - AluSx SINE Alu -11 301 11 687 274 68 23 chr10 32312109 32312328 -108004437 + MLT1J2 LTR MaLR 37 265 -185 850 184 12 24 chr10 32312502 32312670 -108004095 - FAM SINE Alu -9 166 1 459 331 13 19 chr10 32312717 32312874 -108003891 + MIR SINE MIR 17 172 -90 309 259 24 12 chr10 32312878 32312963 -108003802 - L2 LINE L2 -3 3310 3225 415 180 36 54 chr10 32313142 32313231 -108003534 - MER96B DNA MER1_type? 0 417 329 1519 191 0 13 chr10 32313231 32313535 -108003230 + AluJo SINE Alu 1 300 -12 415 180 36 54 chr10 32313535 32313556 -108003209 - MER96B DNA MER1_type? -88 329 309 1248 144 156 64 chr10 32313564 32313891 -108002874 - THE1B LTR MaLR -7 357 1 586 138 69 31 chr10 32313891 32314015 -108002750 + MER96B DNA MER1_type? 100 228 -189 317 265 0 4 chr10 32314637 32314882 -108001883 + (TG)n Simple_repeat Simple_repeat 1 243 0 285 260 0 0 chr10 32314899 32315068 -108001697 + (TG)n Simple_repeat Simple_repeat 2 170 0 790 76 168 0 chr10 32315649 32315742 -108001023 - MER85 DNA T2_type 0 139 20 267 31 0 0 chr10 32315742 32315774 -108000991 + (CA)n Simple_repeat Simple_repeat 1 32 0 790 76 168 0 chr10 32315774 32315799 -108000966 - MER85 DNA T2_type -119 20 1 329 219 126 93 chr10 32315952 32315985 -108000780 + MIR SINE MIR 63 93 -169 1092 143 22 0 chr10 32315985 32316167 -108000598 + MER5A DNA MER1_type 1 186 -3 329 219 126 93 chr10 32316167 32316284 -108000481 + MIR SINE MIR 93 218 -44 1942 81 4 4 chr10 32316809 32317067 -107999698 + L1PA7 LINE L1 5891 6148 -6 2105 173 63 19 chr10 32317101 32317511 -107999254 - MSTA LTR MaLR 0 428 1 2495 116 27 36 chr10 32317606 32317673 -107999092 - L1MB3 LINE L1 -2 6181 6115 2121 105 0 0 chr10 32317673 32317958 -107998807 - AluSx SINE Alu -27 285 1 2495 116 27 36 chr10 32317958 32318330 -107998435 - L1MB3 LINE L1 -68 6115 5746 1916 104 22 0 chr10 32318394 32318672 -107998093 + AluSx SINE Alu 21 304 -8 2223 106 3 6 chr10 32318859 32319171 -107997594 + AluSx SINE Alu 1 311 -1 275 101 0 0 chr10 32319590 32319634 -107997131 + Alu SINE Alu 222 257 -43 448 278 23 17 chr10 32320367 32320540 -107996225 + L1MC4 LINE L1 7396 7569 -473 920 202 27 77 chr10 32320578 32320875 -107995890 - MER34 LTR ERV1 0 542 261 919 218 42 54 chr10 32320915 32321024 -107995741 - MER34 LTR ERV1 -284 258 149 2088 129 0 0 chr10 32321024 32321319 -107995446 - AluSx SINE Alu -17 295 1 919 218 42 54 chr10 32321319 32321470 -107995295 - MER34 LTR ERV1 -393 149 1 216 0 0 0 chr10 32321518 32321542 -107995223 + (A)n Simple_repeat Simple_repeat 1 24 0 381 207 82 22 chr10 32321597 32321732 -107995033 + L1MC4 LINE L1 7690 7832 -210 334 204 106 0 chr10 32321793 32321906 -107994859 + L1MC4 LINE L1 7918 8042 0 227 260 0 0 chr10 32322913 32322963 -107993802 + L2 LINE L2 3263 3312 -1 323 174 14 0 chr10 32323321 32323390 -107993375 - MER33 DNA MER1_type -22 302 233 797 173 27 129 chr10 32323430 32323725 -107993040 - MER33 DNA MER1_type -54 270 6 1941 128 0 41 chr10 32324127 32324446 -107992319 + AluSx SINE Alu 1 306 -6 1850 92 81 18 chr10 32324574 32324847 -107991918 + AluSx SINE Alu 1 290 -22 2093 111 3 0 chr10 32325474 32325772 -107990993 + AluSx SINE Alu 1 299 -13 2888 182 26 35 chr10 32325860 32326469 -107990296 + MER6A DNA MER2_type 2 605 0 2018 148 0 0 chr10 32326768 32327073 -107989692 + AluSx SINE Alu 1 305 -7 389 138 100 50 chr10 32327222 32327302 -107989463 + AluS SINE Alu 1 84 -219 182 182 91 0 chr10 32327305 32327338 -107989427 - L2 LINE L2 -269 3044 3009 1703 166 7 7 chr10 32327338 32327645 -107989120 + AluJo SINE Alu 1 307 -5 202 250 0 42 chr10 32327647 32327695 -107989070 - L2 LINE L2 -250 3022 2977 874 152 14 7 chr10 32328589 32328734 -107988031 - MER5A DNA MER1_type -43 146 1 660 217 12 4 chr10 32328747 32328991 -107987774 + GA-rich Low_complexity Low_complexity 1 246 0 3413 141 58 2 chr10 32328992 32329561 -107987204 - LTR26 LTR ERV1 0 603 3 1100 106 0 11 chr10 32329562 32329742 -107987023 + (GGAA)n Simple_repeat Simple_repeat 1 178 0 180 77 0 0 chr10 32329742 32329768 -107986997 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 434 255 0 0 chr10 32330084 32330178 -107986587 - MER5A DNA MER1_type -87 102 9 254 295 11 32 chr10 32330625 32330720 -107986045 - MER5B DNA MER1_type 0 178 86 783 155 0 0 chr10 32330769 32330885 -107985880 + FLAM_C SINE Alu 12 127 -16 3236 172 45 35 chr10 32331093 32331755 -107985010 - L1MC2 LINE L1 -162 6182 5514 2138 105 16 0 chr10 32331790 32332094 -107984671 - AluSx SINE Alu -3 309 1 1824 137 7 3 chr10 32332190 32332513 -107984252 + AluJo SINE Alu 1 324 0 3508 51 19 19 chr10 32332760 32333227 -107983538 - L1PB1 LINE L1 -1 6150 5684 1712 167 6 26 chr10 32334727 32335038 -107981727 - AluJo SINE Alu -7 305 1 976 229 36 16 chr10 32335087 32335340 -107981425 - MIR SINE MIR -2 260 3 505 150 0 0 chr10 32335477 32335586 -107981179 - AluSg/x SINE Alu 0 312 204 329 26 0 0 chr10 32335586 32335624 -107981141 - AluSp SINE Alu -132 171 134 2225 94 0 0 chr10 32335626 32335923 -107980842 - AluSg SINE Alu -13 297 1 292 283 186 59 chr10 32335928 32336165 -107980600 - L1ME LINE L1 -346 5775 5509 1558 238 145 29 chr10 32336451 32337002 -107979763 - L1ME3A LINE L1 -15 6155 5541 531 239 26 7 chr10 32337012 32337167 -107979598 + L1M4 LINE L1 5188 5345 -801 1967 183 133 38 chr10 32337203 32337678 -107979087 - MLT2B1 LTR ERVL 0 520 1 2190 86 0 19 chr10 32337773 32338088 -107978677 - AluSc SINE Alu 0 309 1 712 237 50 7 chr10 32338088 32338359 -107978406 - L1M3 LINE L1 -740 5440 5161 1981 89 41 17 chr10 32338383 32338675 -107978090 - LTR9B LTR ERV1 -345 299 1 404 211 53 0 chr10 32338676 32338752 -107978013 + Tigger3(Golem) DNA MER2_type 2949 3028 -1 294 243 29 58 chr10 32338771 32338874 -107977891 + L2 LINE L2 3171 3270 -43 233 235 0 0 chr10 32339244 32339295 -107977470 + L3 LINE CR1 1088 1138 -439 1116 174 38 9 chr10 32339846 32340058 -107976707 - MER20 DNA MER1_type -1 218 1 883 124 0 0 chr10 32340279 32340408 -107976357 - FLAM_C SINE Alu 0 133 5 352 253 81 90 chr10 32340693 32341091 -107975674 - MLT1J LTR MaLR -16 495 36 1785 167 14 0 chr10 32341575 32341869 -107974896 + AluSx SINE Alu 1 298 -14 1633 143 8 4 chr10 32341870 32342128 -107974637 + AluSx SINE Alu 38 296 -16 242 333 20 20 chr10 32342771 32342873 -107973892 - MER5B DNA MER1_type -41 137 36 216 259 56 0 chr10 32342938 32342992 -107973773 - MIR SINE MIR -65 143 87 240 221 58 19 chr10 32343778 32343882 -107972883 + (CA)n Simple_repeat Simple_repeat 1 108 0 351 237 40 35 chr10 32344057 32344230 -107972535 + (CA)n Simple_repeat Simple_repeat 2 175 0 275 263 71 0 chr10 32344398 32344497 -107972268 - L2 LINE L2 0 3313 3208 940 237 46 62 chr10 32344681 32344835 -107971930 - MER33 DNA MER1_type -2261 324 169 2015 97 0 81 chr10 32344835 32345169 -107971596 + AluSx SINE Alu 1 309 0 940 237 46 62 chr10 32345169 32345338 -107971427 - MER33 DNA MER1_type -2416 169 5 360 0 0 0 chr10 32345570 32345610 -107971155 + (CA)n Simple_repeat Simple_repeat 1 40 0 704 176 0 8 chr10 32345614 32345739 -107971026 + AluSg/x SINE Alu 175 298 -12 183 42 0 0 chr10 32346374 32346398 -107970367 + (A)n Simple_repeat Simple_repeat 1 24 0 283 260 67 19 chr10 32346520 32346624 -107970141 + MIR SINE MIR 75 183 -79 1756 200 67 49 chr10 32346649 32347158 -107969607 - LTR40a LTR ERVL 0 519 2 217 247 73 60 chr10 32347181 32347331 -107969434 - MIR SINE MIR -33 229 78 311 232 0 53 chr10 32348007 32348102 -107968663 - MIR SINE MIR -5 257 168 1892 159 6 16 chr10 32349663 32349978 -107966787 - AluSx SINE Alu 0 312 1 1369 234 92 42 chr10 32349981 32350383 -107966382 - MLT1F LTR MaLR -40 502 81 7304 105 15 8 chr10 32350413 32350539 -107966226 - L1MA3 LINE L1 0 6305 6181 1979 128 20 23 chr10 32350539 32350843 -107965922 - AluSx SINE Alu -9 303 1 7304 105 15 8 chr10 32350843 32351926 -107964839 - L1MA3 LINE L1 -124 6181 5088 229 217 22 0 chr10 32351947 32351993 -107964772 - L1ME4a LINE L1 -88 6033 5987 237 291 75 95 chr10 32352131 32352426 -107964339 - L2 LINE L2 -12 3260 2972 291 288 170 7 chr10 32352522 32352675 -107964090 + MER5A DNA MER1_type 9 186 -3 412 204 14 84 chr10 32352837 32352979 -107963786 + MER104 DNA Tc2 1 132 -48 788 181 20 7 chr10 32353963 32354112 -107962653 - FRAM SINE Alu -16 160 10 1304 259 46 67 chr10 32354292 32354455 -107962310 + MLT1J LTR MaLR 1 166 -345 1020 228 119 13 chr10 32354455 32354766 -107961999 + MER2 DNA MER2_type 1 344 0 1304 259 46 67 chr10 32354766 32355124 -107961641 + MLT1J LTR MaLR 166 511 0 277 319 71 0 chr10 32355215 32355328 -107961437 + MIR SINE MIR 23 143 -119 1018 122 32 79 chr10 32355461 32355587 -107961178 - Tigger4(Zombi) DNA MER2_type -3 2728 2612 2232 114 0 3 chr10 32355587 32355884 -107960881 - AluSx SINE Alu -16 296 1 1018 122 32 79 chr10 32355884 32355946 -107960819 - Tigger4(Zombi) DNA MER2_type -119 2612 2549 218 222 0 0 chr10 32356204 32356249 -107960516 + (TA)n Simple_repeat Simple_repeat 2 46 0 944 223 112 66 chr10 32356319 32356755 -107960010 - MLT1C LTR MaLR 0 467 1 2471 72 0 3 chr10 32356955 32357259 -107959506 - AluY SINE Alu -8 303 1 431 142 123 38 chr10 32358430 32358493 -107958272 - Tigger4(Zombi) DNA MER2_type -246 115 59 2304 86 0 23 chr10 32358493 32358797 -107957968 + AluY SINE Alu 1 297 -14 431 142 123 38 chr10 32358797 32358839 -107957926 - Tigger4(Zombi) DNA MER2_type -302 59 1 2089 120 11 0 chr10 32358909 32359193 -107957572 + AluSp SINE Alu 1 287 -26 824 138 8 15 chr10 32359243 32359373 -107957392 + AluJ SINE Alu 1 129 -173 253 323 136 19 chr10 32360070 32360225 -107956540 - MIR3 SINE MIR -9 199 27 993 166 0 0 chr10 32361434 32361585 -107955180 + AluJ SINE Alu 134 284 -28 248 333 0 0 chr10 32364025 32364100 -107952665 + (TA)n Simple_repeat Simple_repeat 1 75 0 207 291 0 0 chr10 32364557 32364612 -107952153 + A-rich Low_complexity Low_complexity 2 56 0 324 210 0 0 chr10 32364615 32364696 -107952069 + GA-rich Low_complexity Low_complexity 3 83 0 203 88 29 0 chr10 32366547 32366581 -107950184 + (TTC)n Simple_repeat Simple_repeat 2 36 0 3719 138 18 68 chr10 32367099 32367347 -107949418 + L1MA9 LINE L1 5557 5816 -496 2493 80 0 3 chr10 32367347 32367659 -107949106 + AluSp SINE Alu 1 311 -2 3719 138 18 68 chr10 32367659 32368206 -107948559 + L1MA9 LINE L1 5816 6312 0 2215 129 7 0 chr10 32368320 32368630 -107948135 + AluSx SINE Alu 1 312 0 1635 153 38 29 chr10 32369446 32369482 -107947283 - MER33 DNA MER1_type -2268 317 283 1735 145 43 18 chr10 32369482 32369764 -107947001 - AluJo SINE Alu -23 289 1 1635 153 38 29 chr10 32369764 32370041 -107946724 - MER33 DNA MER1_type -2302 283 1 3543 128 40 27 chr10 32370971 32371308 -107945457 + MER7C DNA MER2_type 3 353 -2675 2233 129 0 0 chr10 32371308 32371610 -107945155 - AluSq SINE Alu -11 302 1 3543 128 40 27 chr10 32371610 32371864 -107944901 + MER7C DNA MER2_type 353 602 0 1611 153 4 8 chr10 32372202 32372457 -107944308 + AluJo SINE Alu 49 302 -10 2588 65 0 0 chr10 32372961 32373267 -107943498 - AluY SINE Alu -5 306 1 270 116 23 0 chr10 32373508 32373551 -107943214 + Alu SINE Alu 1 44 -259 208 311 0 0 chr10 32374026 32374100 -107942665 + C-rich Low_complexity Low_complexity 3 76 0 2574 24 7 3 chr10 32377459 32377752 -107939013 + AluY SINE Alu 1 294 -17 21 0 0 0 chr10 32377901 32377922 -107938843 + AT_rich Low_complexity Low_complexity 1 21 0 436 119 15 0 chr10 32377995 32378062 -107938703 + MER116 DNA Mariner 13 80 0 988 258 65 90 chr10 32378123 32378359 -107938406 - L1ME4a LINE L1 -103 6018 5778 1873 149 21 10 chr10 32378359 32378647 -107938118 - AluSx SINE Alu -21 291 1 988 258 65 90 chr10 32378647 32378835 -107937930 - L1ME4a LINE L1 -343 5778 5587 1824 160 7 3 chr10 32378835 32379149 -107937616 - AluSx SINE Alu 0 315 1 988 258 65 90 chr10 32379149 32379446 -107937319 - L1ME4a LINE L1 -534 5587 5315 296 190 38 76 chr10 32380060 32380139 -107936626 - MIR3 SINE MIR -23 185 110 404 82 16 0 chr10 32381119 32381180 -107935585 + (TG)n Simple_repeat Simple_repeat 1 62 0 295 268 178 38 chr10 32381370 32381583 -107935182 + MIR SINE MIR 18 260 -2 1998 159 3 0 chr10 32382085 32382394 -107934371 - AluSx SINE Alu -2 310 1 293 200 188 0 chr10 32382540 32382625 -107934140 - L2 LINE L2 -3 3310 3210 2197 105 0 7 chr10 32383560 32383856 -107932909 + AluSq SINE Alu 1 294 -19 2301 93 26 0 chr10 32385029 32385331 -107931434 - AluSg SINE Alu 0 310 1 1835 158 18 0 chr10 32385334 32385618 -107931147 - AluJo SINE Alu -23 289 1 235 204 19 37 chr10 32385650 32385704 -107931061 + L2 LINE L2 3243 3295 -18 24 0 0 0 chr10 32387726 32387750 -107929015 + AT_rich Low_complexity Low_complexity 1 24 0 1240 208 202 18 chr10 32388193 32388520 -107928245 - MSTD LTR MaLR -8 388 2 228 35 0 0 chr10 32390426 32390455 -107926310 + (CA)n Simple_repeat Simple_repeat 2 30 0 182 69 0 0 chr10 32391862 32391891 -107924874 + L2 LINE L2 3285 3313 0 287 327 43 14 chr10 32392454 32392662 -107924103 - MIR SINE MIR -21 241 28 180 297 55 11 chr10 32392919 32393010 -107923755 - MIR SINE MIR -51 211 117 247 182 36 0 chr10 32393672 32393714 -107923051 + CT-rich Low_complexity Low_complexity 2 48 -10 1854 135 22 19 chr10 32393714 32394025 -107922740 - AluJo SINE Alu 0 312 1 247 182 36 0 chr10 32394025 32394037 -107922728 + CT-rich Low_complexity Low_complexity 48 58 0 189 0 0 0 chr10 32394472 32394493 -107922272 + (T)n Simple_repeat Simple_repeat 1 21 0 2129 103 0 19 chr10 32395955 32396266 -107920499 - AluSq SINE Alu -8 305 1 1970 117 4 0 chr10 32398163 32398486 -107918279 - AluSx SINE Alu 0 324 1 291 267 186 17 chr10 32398821 32398993 -107917772 + L1ME4a LINE L1 5392 5592 -529 555 280 127 34 chr10 32399218 32399454 -107917311 + MIR SINE MIR 3 260 -2 * 569 277 20 7 chr10 32399451 32399599 -107917166 + MIR SINE MIR 91 240 -22 365 223 91 66 chr10 32399726 32399847 -107916918 + L1ME4a LINE L1 5994 6117 -4 539 301 54 6 chr10 32400049 32400215 -107916550 + MER5B DNA MER1_type 3 176 -2 229 207 69 17 chr10 32400313 32400371 -107916394 - MER5A DNA MER1_type 0 189 129 2686 13 0 0 chr10 32400373 32400676 -107916089 + AluYa5 SINE Alu 1 303 -8 2129 92 7 0 chr10 32400685 32400978 -107915787 + AluSx SINE Alu 1 295 -17 366 23 0 0 chr10 32400979 32401022 -107915743 + (GGGGA)n Simple_repeat Simple_repeat 1 43 0 1303 159 8 21 chr10 32401111 32401350 -107915415 + AluJb SINE Alu 59 294 -18 294 29 0 0 chr10 32403019 32403054 -107913711 + (CTG)n Simple_repeat Simple_repeat 2 36 0 1626 175 17 0 chr10 32405609 32405901 -107910864 + AluJo SINE Alu 1 297 -15 184 128 26 77 chr10 32405932 32405971 -107910794 + MER5A DNA MER1_type 2 38 -151 786 178 81 35 chr10 32406055 32406229 -107910536 - MER5A DNA MER1_type -4 185 4 526 217 21 122 chr10 32406238 32406427 -107910338 + MER5B DNA MER1_type 3 172 -6 384 298 0 19 chr10 32406466 32406570 -107910195 - MER5A DNA MER1_type -28 161 60 944 154 17 23 chr10 32406570 32406745 -107910020 - FRAM SINE Alu -7 169 1 223 263 0 11 chr10 32407105 32407280 -107909485 + (CA)n Simple_repeat Simple_repeat 2 174 0 230 95 24 0 chr10 32407338 32407380 -107909385 + (CA)n Simple_repeat Simple_repeat 2 44 0 191 266 128 9 chr10 32407460 32407569 -107909196 - MIR3 SINE MIR -27 181 60 316 221 229 0 chr10 32407905 32408027 -107908738 - MIR SINE MIR -3 259 110 429 293 96 26 chr10 32408268 32408442 -107908323 + MIR SINE MIR 17 199 -61 2163 109 3 0 chr10 32408488 32408799 -107907966 + AluSx SINE Alu 1 312 0 2520 120 17 3 chr10 32409760 32410119 -107906646 - THE1B LTR MaLR 0 364 1 1702 102 22 25 chr10 32410853 32410960 -107905805 - L1MA6 LINE L1 -6 6294 6188 2482 105 21 103 chr10 32410960 32411041 -107905724 + MSTC LTR MaLR 1 87 -341 1824 151 3 0 chr10 32411041 32411332 -107905433 - AluSg SINE Alu -18 292 1 2482 105 21 103 chr10 32411332 32411715 -107905050 + MSTC LTR MaLR 87 427 -1 1702 102 22 25 chr10 32411715 32411881 -107904884 - L1MA6 LINE L1 -112 6188 6022 2348 92 0 0 chr10 32411893 32412197 -107904568 - AluSg SINE Alu -6 304 1 1309 218 66 3 chr10 32412288 32412623 -107904142 + L1MA4 LINE L1 5945 6300 0 1670 178 3 0 chr10 32412735 32413028 -107903737 - AluJo SINE Alu -18 294 1 309 303 15 77 chr10 32413062 32413257 -107903508 + MER5A DNA MER1_type 4 186 -3 1389 165 129 0 chr10 32413977 32414249 -107902516 + AluSx SINE Alu 1 307 -5 981 196 0 0 chr10 32414251 32414414 -107902351 + AluJo/FRAM SINE Alu 137 299 -13 526 130 13 0 chr10 32414551 32414628 -107902137 - AluS SINE Alu -234 79 2 189 243 0 0 chr10 32414647 32414684 -107902081 - L2 LINE L2 -27 3245 3209 1894 162 55 0 chr10 32414747 32415075 -107901690 - MER7A DNA MER2_type 0 346 3 2199 100 3 7 chr10 32415108 32415417 -107901348 + AluSq SINE Alu 1 308 -5 1261 239 51 20 chr10 32415707 32416097 -107900668 + MER74B LTR ERVL 211 612 -10 1270 217 52 11 chr10 32416317 32416603 -107900162 + AluJo SINE Alu 1 298 -4 1035 130 0 0 chr10 32416685 32416839 -107899926 + AluJb SINE Alu 142 295 -17 192 40 0 0 chr10 32417886 32417911 -107898854 + (TTG)n Simple_repeat Simple_repeat 2 26 0 2070 118 3 0 chr10 32417913 32418202 -107898563 - AluSx SINE Alu -18 294 5 1751 106 99 0 chr10 32418524 32418797 -107897968 + AluSx SINE Alu 1 300 -12 276 81 23 69 chr10 32419108 32419195 -107897570 + (GGGAA)n Simple_repeat Simple_repeat 2 84 0 257 274 68 14 chr10 32419626 32419656 -107897109 + MER5A DNA MER1_type 110 137 -52 1871 120 46 0 chr10 32419656 32419939 -107896826 - AluSg SINE Alu -14 296 1 257 274 68 14 chr10 32419939 32419981 -107896784 + MER5A DNA MER1_type 137 186 -3 426 297 124 22 chr10 32420169 32420354 -107896411 + MIR SINE MIR 20 223 -39 824 68 0 8 chr10 32420649 32420766 -107895999 + (TTCC)n Simple_repeat Simple_repeat 4 119 0 1610 161 10 17 chr10 32421792 32422091 -107894674 - AluJo SINE Alu -15 297 1 2212 91 0 10 chr10 32423031 32423328 -107893437 - AluSx SINE Alu -18 294 1 1081 161 11 0 chr10 32424276 32424456 -107892309 - AluSg/x SINE Alu -10 300 119 3702 174 45 4 chr10 32424457 32425152 -107891613 - L1MB4 LINE L1 -42 6138 5416 200 61 61 0 chr10 32425396 32425429 -107891336 + CT-rich Low_complexity Low_complexity 2 36 0 1868 66 55 0 chr10 32426116 32426373 -107890392 + AluY SINE Alu 35 305 -6 231 259 0 17 chr10 32428273 32428331 -107888434 - MLT1K LTR MaLR 0 588 532 2073 116 7 0 chr10 32428434 32428735 -107888030 - AluSx SINE Alu -9 303 1 21 36 0 0 chr10 32429358 32429386 -107887379 + AT_rich Low_complexity Low_complexity 1 28 0 2007 125 3 16 chr10 32429440 32429573 -107887192 + AluSc SINE Alu 1 134 -175 2251 105 3 6 chr10 32429573 32429887 -107886878 + AluSp SINE Alu 1 313 0 2007 125 3 16 chr10 32429887 32430064 -107886701 + AluSc SINE Alu 134 307 -2 305 233 8 125 chr10 32430200 32430320 -107886445 - MIR SINE MIR -61 147 42 1377 198 50 3 chr10 32430749 32431047 -107885718 + AluJo SINE Alu 1 312 0 621 215 6 17 chr10 32431065 32431242 -107885523 + GA-rich Low_complexity Low_complexity 2 176 0 1347 222 104 64 chr10 32431337 32431785 -107884980 + MLT2B1 LTR ERVL 1 472 -48 666 85 0 0 chr10 32431785 32431879 -107884886 + (TCTA)n Simple_repeat Simple_repeat 1 94 0 1347 222 104 64 chr10 32431879 32431929 -107884836 + MLT2B1 LTR ERVL 472 519 -1 57 28 0 0 chr10 32433082 32433153 -107883612 + AT_rich Low_complexity Low_complexity 1 71 0 2009 116 14 0 chr10 32434164 32434458 -107882307 + AluSx SINE Alu 1 298 -14 232 365 153 0 chr10 32435607 32435744 -107881021 + L2 LINE L2 3099 3256 -16 355 230 53 0 chr10 32436296 32436397 -107880368 + MIR SINE MIR 103 211 -51 385 200 207 29 chr10 32437136 32437276 -107879489 - MER3 DNA MER1_type 0 209 45 1841 126 9 49 chr10 32437460 32437785 -107878980 + AluSx SINE Alu 1 312 0 262 297 162 57 chr10 32438178 32438616 -107878149 + L2 LINE L2 2830 3313 0 473 261 67 39 chr10 32439470 32439650 -107877115 - L2 LINE L2 -9 3304 3120 1983 201 88 36 chr10 32439705 32440226 -107876539 + LTR10A LTR ERV1 1 548 -61 271 45 91 0 chr10 32440282 32440326 -107876439 - MER4B LTR ERV1 0 779 732 2010 104 3 7 chr10 32440369 32440666 -107876099 - AluSx SINE Alu -6 306 11 2955 119 34 12 chr10 32440726 32441120 -107875645 - MER4B LTR ERV1 -31 748 172 2014 111 3 7 chr10 32441120 32441408 -107875357 + AluSg SINE Alu 1 287 -23 2955 119 34 12 chr10 32441408 32441510 -107875255 - MER4B LTR ERV1 -607 172 74 25 0 0 0 chr10 32441510 32441535 -107875230 + AT_rich Low_complexity Low_complexity 1 25 0 913 104 0 0 chr10 32441535 32441660 -107875105 - AluSq/x SINE Alu -188 125 1 600 107 0 0 chr10 32441660 32441744 -107875021 - MER4B LTR ERV1 -526 84 1 2911 150 25 47 chr10 32442110 32442165 -107874600 - L1MB1 LINE L1 -17 6172 6117 1993 128 3 10 chr10 32442165 32442463 -107874302 - AluSx SINE Alu -16 296 1 2911 150 25 47 chr10 32442463 32442707 -107874058 - L1MB1 LINE L1 -72 6117 5888 2814 97 0 0 chr10 32442707 32443069 -107873696 - THE1B LTR MaLR 0 364 3 2911 150 25 47 chr10 32443069 32443327 -107873438 - L1MB1 LINE L1 -301 5888 5626 387 117 17 0 chr10 32443330 32443390 -107873375 + L1MB1 LINE L1 5572 5632 -551 231 61 0 0 chr10 32443606 32443639 -107873126 + (CA)n Simple_repeat Simple_repeat 2 34 0 1266 93 11 6 chr10 32443720 32443902 -107872863 - AluSp SINE Alu -7 306 124 2843 103 23 16 chr10 32444304 32444731 -107872034 + L1PA16 LINE L1 5728 6157 -9 243 0 0 0 chr10 32444775 32444802 -107871963 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 468 250 167 0 chr10 32444913 32445057 -107871708 - MIR SINE MIR 0 262 95 1698 111 115 7 chr10 32445335 32445605 -107871160 - AluSg SINE Alu 0 310 12 1860 138 24 34 chr10 32446133 32446431 -107870334 + AluJo SINE Alu 1 295 -17 2130 108 0 0 chr10 32446524 32446793 -107869972 - AluSx SINE Alu -43 269 1 4213 138 6 2 chr10 32447113 32447745 -107869020 + MER41B LTR ERV1 1 635 0 2276 108 3 0 chr10 32448023 32448319 -107868446 + AluSq SINE Alu 1 297 -16 530 91 0 26 chr10 32451290 32451367 -107865398 - FLAM SINE Alu -18 125 51 292 247 70 119 chr10 32451431 32451658 -107865107 - L2 LINE L2 -1 3312 3097 3979 186 18 35 chr10 32451675 32452184 -107864581 + L1MB5 LINE L1 5364 5880 -294 1707 163 0 52 chr10 32452184 32452509 -107864256 + AluJo SINE Alu 1 308 -4 3979 186 18 35 chr10 32452509 32452582 -107864183 + L1MB5 LINE L1 5880 5953 -221 2313 113 0 0 chr10 32452582 32452883 -107863882 + AluSx SINE Alu 1 301 -11 3979 186 18 35 chr10 32452883 32453118 -107863647 + L1MB5 LINE L1 5953 6168 -6 215 283 0 0 chr10 32453154 32453214 -107863551 - L2 LINE L2 -245 3068 3009 2438 84 7 0 chr10 32453261 32453570 -107863195 + AluSx SINE Alu 1 311 -1 2343 91 0 10 chr10 32454539 32454836 -107861929 - AluSx SINE Alu -18 294 1 1143 161 11 0 chr10 32455784 32455964 -107860801 - AluSg/x SINE Alu -10 300 119 3713 177 43 4 chr10 32455965 32456661 -107860104 - L1MB4 LINE L1 -42 6138 5416 200 61 61 0 chr10 32456905 32456938 -107859827 + CT-rich Low_complexity Low_complexity 2 36 0 1977 66 55 0 chr10 32457624 32457881 -107858884 + AluY SINE Alu 35 305 -6 234 259 0 17 chr10 32459780 32459838 -107856927 - MLT1K LTR MaLR 0 588 532 2200 116 7 0 chr10 32459941 32460242 -107856523 - AluSx SINE Alu -9 303 1 21 36 0 0 chr10 32460865 32460893 -107855872 + AT_rich Low_complexity Low_complexity 1 28 0 2116 125 3 22 chr10 32460947 32461080 -107855685 + AluSc SINE Alu 1 135 -174 2399 109 3 0 chr10 32461080 32461392 -107855373 + AluSp SINE Alu 1 313 0 2116 125 3 22 chr10 32461392 32461571 -107855194 + AluSc SINE Alu 135 307 -2 269 233 8 125 chr10 32461707 32461827 -107854938 - MIR SINE MIR -61 147 42 1504 184 53 3 chr10 32462256 32462539 -107854226 + AluJo SINE Alu 1 297 -15 621 206 5 14 chr10 32462539 32462749 -107854016 + GA-rich Low_complexity Low_complexity 1 207 0 1346 222 104 64 chr10 32462844 32463292 -107853473 + MLT2B1 LTR ERVL 1 472 -48 666 85 0 0 chr10 32463292 32463386 -107853379 + (TCTA)n Simple_repeat Simple_repeat 1 94 0 1346 222 104 64 chr10 32463386 32463436 -107853329 + MLT2B1 LTR ERVL 472 519 -1 57 28 0 0 chr10 32464589 32464660 -107852105 + AT_rich Low_complexity Low_complexity 1 71 0 2207 117 13 0 chr10 32465671 32465979 -107850786 + AluSx SINE Alu 1 312 0 180 0 0 0 chr10 32466353 32466373 -107850392 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2152 109 0 0 chr10 32466374 32466649 -107850116 - AluSc SINE Alu -34 275 1 2056 111 0 33 chr10 32467196 32467502 -107849263 + AluSx SINE Alu 1 296 -16 342 0 0 0 chr10 32468024 32468062 -107848703 + (TG)n Simple_repeat Simple_repeat 2 39 0 2118 131 3 0 chr10 32468770 32469067 -107847698 + AluSx SINE Alu 1 298 -14 273 57 0 0 chr10 32469067 32469102 -107847663 + (GGGGA)n Simple_repeat Simple_repeat 1 35 0 521 184 31 0 chr10 32469935 32470033 -107846732 - FLAM_A SINE Alu 0 142 42 234 0 0 0 chr10 32470225 32470251 -107846514 + (T)n Simple_repeat Simple_repeat 1 26 0 2323 96 0 34 chr10 32470252 32470575 -107846190 + AluSx SINE Alu 1 312 0 356 81 0 16 chr10 32470575 32470637 -107846128 + (TA)n Simple_repeat Simple_repeat 1 61 0 1959 136 3 40 chr10 32472670 32472993 -107843772 + AluSx SINE Alu 1 311 -1 189 365 153 0 chr10 32474125 32474262 -107842503 + L2 LINE L2 3099 3256 -16 310 230 53 0 chr10 32474814 32474915 -107841850 + MIR SINE MIR 103 211 -51 387 200 207 29 chr10 32475654 32475794 -107840971 - MER3 DNA MER1_type 0 209 45 1964 126 9 49 chr10 32475978 32476303 -107840462 + AluSx SINE Alu 1 312 0 408 261 67 39 chr10 32477988 32478168 -107838597 - L2 LINE L2 -9 3304 3120 1973 201 88 36 chr10 32478223 32478744 -107838021 + LTR10A LTR ERV1 1 548 -61 277 45 91 0 chr10 32478800 32478844 -107837921 - MER4B LTR ERV1 0 779 732 2104 87 7 14 chr10 32478853 32479195 -107837570 - AluSx SINE Alu 0 340 1 2962 119 34 12 chr10 32479244 32479638 -107837127 - MER4B LTR ERV1 -31 748 172 2144 108 3 7 chr10 32479638 32479926 -107836839 + AluSg SINE Alu 1 287 -23 2962 119 34 12 chr10 32479926 32480028 -107836737 - MER4B LTR ERV1 -607 172 74 25 0 0 0 chr10 32480028 32480053 -107836712 + AT_rich Low_complexity Low_complexity 1 25 0 968 104 0 0 chr10 32480053 32480178 -107836587 - AluSq/x SINE Alu -187 125 1 597 107 0 0 chr10 32480178 32480262 -107836503 - MER4B LTR ERV1 -526 84 1 2924 150 25 47 chr10 32480628 32480683 -107836082 - L1MB1 LINE L1 -17 6172 6117 2117 128 3 10 chr10 32480683 32480981 -107835784 - AluSx SINE Alu -16 296 1 2924 150 25 47 chr10 32480981 32481225 -107835540 - L1MB1 LINE L1 -72 6117 5888 2810 97 0 0 chr10 32481225 32481587 -107835178 - THE1B LTR MaLR 0 364 3 2924 150 25 47 chr10 32481587 32481845 -107834920 - L1MB1 LINE L1 -301 5888 5626 392 117 17 0 chr10 32481848 32481908 -107834857 + L1MB1 LINE L1 5572 5632 -551 231 61 0 0 chr10 32482124 32482157 -107834608 + (CA)n Simple_repeat Simple_repeat 2 34 0 1341 93 11 6 chr10 32482238 32482420 -107834345 - AluSp SINE Alu -7 306 124 2845 103 23 16 chr10 32482822 32483249 -107833516 + L1PA16 LINE L1 5728 6157 -9 243 0 0 0 chr10 32483293 32483320 -107833445 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 422 264 25 0 chr10 32483454 32483575 -107833190 - MIR SINE MIR -44 218 95 1802 111 115 7 chr10 32483853 32484123 -107832642 - AluSg SINE Alu 0 310 12 1860 138 24 34 chr10 32484651 32484949 -107831816 + AluJo SINE Alu 1 295 -17 2130 108 0 0 chr10 32485042 32485311 -107831454 - AluSx SINE Alu -43 269 1 4213 138 6 2 chr10 32485631 32486263 -107830502 + MER41B LTR ERV1 1 635 0 2276 108 3 0 chr10 32486541 32486837 -107829928 + AluSq SINE Alu 1 297 -16 530 91 0 26 chr10 32489808 32489885 -107826880 - FLAM_A SINE Alu -18 124 50 292 247 70 119 chr10 32489949 32490176 -107826589 - L2 LINE L2 -1 3312 3097 3979 186 18 35 chr10 32490193 32490702 -107826063 + L1MB5 LINE L1 5364 5880 -294 1707 163 0 52 chr10 32490702 32491027 -107825738 + AluJo SINE Alu 1 308 -4 3979 186 18 35 chr10 32491027 32491100 -107825665 + L1MB5 LINE L1 5880 5953 -221 2313 113 0 0 chr10 32491100 32491401 -107825364 + AluSx SINE Alu 1 301 -11 3979 186 18 35 chr10 32491401 32491636 -107825129 + L1MB5 LINE L1 5953 6168 -6 215 283 0 0 chr10 32491672 32491732 -107825033 - L2 LINE L2 -245 3068 3009 2438 84 7 0 chr10 32491779 32492088 -107824677 + AluSx SINE Alu 1 311 -1 474 205 18 27 chr10 32492794 32492906 -107823859 - FLAM_C SINE Alu -18 125 15 193 342 25 0 chr10 32492912 32492991 -107823774 + MIR SINE MIR 67 147 -61 198 0 0 0 chr10 32493487 32493509 -107823256 + (A)n Simple_repeat Simple_repeat 1 22 0 423 66 40 0 chr10 32493735 32493811 -107822954 + (TAGA)n Simple_repeat Simple_repeat 4 82 0 198 0 0 0 chr10 32494915 32494937 -107821828 + (TG)n Simple_repeat Simple_repeat 1 22 0 2249 102 7 7 chr10 32495646 32495950 -107820815 + AluSq SINE Alu 1 304 -9 894 264 10 5 chr10 32495950 32496158 -107820607 + MER58A DNA MER1_type 4 212 -12 246 400 40 0 chr10 32496616 32496716 -107820049 + L2 LINE L2 3121 3224 -48 362 311 80 50 chr10 32497378 32497616 -107819149 + LTR67 LTR ERVL 23 267 -290 322 301 77 14 chr10 32497709 32497852 -107818913 + LTR67 LTR ERVL 392 543 -14 880 246 157 53 chr10 32498109 32498438 -107818327 + LTR33A LTR ERVL 88 467 -56 2023 116 0 0 chr10 32498438 32498749 -107818016 - AluSx SINE Alu 0 311 1 880 246 157 53 chr10 32498749 32498813 -107817952 + LTR33A LTR ERVL 467 523 0 225 0 0 0 chr10 32499075 32499100 -107817665 + (A)n Simple_repeat Simple_repeat 1 25 0 1997 136 0 0 chr10 32499100 32499394 -107817371 + AluSx SINE Alu 1 294 -18 346 356 111 33 chr10 32499571 32499930 -107816835 + L1ME4a LINE L1 5673 6059 -62 1055 123 12 6 chr10 32499933 32500103 -107816662 - AluSc SINE Alu -16 293 123 207 170 0 64 chr10 32500127 32500143 -107816622 + CT-rich Low_complexity Low_complexity 5 20 -28 2217 122 36 31 chr10 32500143 32500503 -107816262 + THE1B LTR MaLR 1 362 -2 207 170 0 64 chr10 32500503 32500533 -107816232 + CT-rich Low_complexity Low_complexity 20 48 0 2184 120 108 57 chr10 32500760 32501167 -107815598 - MSTA LTR MaLR 0 428 1 371 268 12 0 chr10 32501256 32501338 -107815427 - MIR SINE MIR -72 136 54 2223 44 0 7 chr10 32501701 32501976 -107814789 + AluY SINE Alu 34 306 -5 225 283 38 47 chr10 32501982 32502088 -107814677 + MIR SINE MIR 133 237 -25 2426 70 0 6 chr10 32502273 32502586 -107814179 - AluY SINE Alu 0 311 1 2111 100 0 39 chr10 32502646 32502955 -107813810 - AluSx SINE Alu -15 297 1 201 83 56 0 chr10 32503357 32503393 -107813372 + (TG)n Simple_repeat Simple_repeat 1 38 0 614 113 10 10 chr10 32503446 32503543 -107813222 + MER4A LTR ERV1 1 97 -567 * 1811 138 156 77 chr10 32503540 32503918 -107812847 + MER4A LTR ERV1 257 664 0 284 320 40 32 chr10 32504140 32504265 -107812500 + L2 LINE L2 3137 3262 -10 329 262 10 48 chr10 32505068 32505171 -107811594 - MER5A DNA MER1_type -2 187 89 24 0 0 0 chr10 32505171 32505195 -107811570 + AT_rich Low_complexity Low_complexity 1 24 0 2058 100 4 0 chr10 32505208 32505487 -107811278 + AluSq SINE Alu 1 280 -33 1388 206 0 34 chr10 32505534 32505826 -107810939 - AluJo SINE Alu -30 282 1 2336 70 0 0 chr10 32506825 32507125 -107809640 + AluSg SINE Alu 1 300 -10 408 311 120 52 chr10 32507491 32507873 -107808892 + L3b LINE CR1 1167 1574 -9 736 285 52 27 chr10 32507896 32508116 -107808649 - MIR SINE MIR 0 262 38 2167 169 49 24 chr10 32508221 32508346 -107808419 - L1MA9 LINE L1 0 6312 6192 1996 142 0 0 chr10 32508346 32508655 -107808110 - AluSx SINE Alu -3 309 1 2167 169 49 24 chr10 32508655 32508995 -107807770 - L1MA9 LINE L1 -120 6192 5835 2414 55 0 3 chr10 32509555 32509867 -107806898 + AluY SINE Alu 1 311 0 2201 109 0 13 chr10 32510226 32510539 -107806226 - AluSc SINE Alu 0 309 1 1280 205 60 7 chr10 32511178 32511461 -107805304 + AluJo SINE Alu 3 300 -2 1787 159 16 13 chr10 32511956 32512368 -107804397 + AluSq SINE Alu 3 415 0 243 88 0 0 chr10 32513885 32513919 -107802846 + (CA)n Simple_repeat Simple_repeat 1 34 0 210 206 27 27 chr10 32513935 32514008 -107802757 + (CA)n Simple_repeat Simple_repeat 1 73 0 23 33 0 0 chr10 32514009 32514039 -107802726 + AT_rich Low_complexity Low_complexity 1 30 0 2169 87 3 0 chr10 32514041 32514329 -107802436 - AluSx SINE Alu -22 290 2 438 325 57 45 chr10 32514361 32514607 -107802158 - MIR SINE MIR -13 249 1 1856 150 0 3 chr10 32515033 32515333 -107801432 + AluJo SINE Alu 5 303 -9 2122 101 0 22 chr10 32515688 32516005 -107800760 - AluSx SINE Alu -2 310 1 1714 146 19 41 chr10 32516006 32516321 -107800444 - AluJo SINE Alu -2 310 3 305 309 0 12 chr10 32516855 32516939 -107799826 - L2 LINE L2 0 3272 3190 2093 123 0 3 chr10 32517195 32517504 -107799261 - AluSx SINE Alu -4 308 1 826 147 8 0 chr10 32518406 32518535 -107798230 - FLAM_C SINE Alu -3 130 1 1812 176 3 0 chr10 32518629 32518931 -107797834 + AluSx SINE Alu 1 303 -9 1032 250 89 0 chr10 32518971 32519219 -107797546 + Charlie1a DNA MER1_type 6 275 -1180 966 154 12 0 chr10 32519231 32519393 -107797372 + FRAM SINE Alu 4 167 -9 226 132 19 19 chr10 32519398 32519451 -107797314 + Charlie1a DNA MER1_type 279 331 -1124 * 2158 152 140 64 chr10 32519448 32519576 -107797189 + Charlie1a DNA MER1_type 847 964 -1797 1605 123 0 76 chr10 32519576 32519909 -107796856 - AluSx SINE Alu 0 315 6 2158 152 140 64 chr10 32519909 32520345 -107796420 + Charlie1a DNA MER1_type 964 1455 0 858 189 16 53 chr10 32520974 32521105 -107795660 + MER5A DNA MER1_type 6 129 -60 2162 109 0 7 chr10 32521105 32521408 -107795357 - AluSx SINE Alu -11 301 1 858 189 16 53 chr10 32521408 32521466 -107795299 + MER5A DNA MER1_type 129 188 -1 1697 176 3 10 chr10 32522478 32522774 -107793991 + AluJo SINE Alu 1 294 -18 655 242 0 0 chr10 32523011 32523143 -107793622 + FLAM_A SINE Alu 1 132 -1 1164 206 64 103 chr10 32523509 32523699 -107793066 + MLT1B LTR MaLR 14 183 -207 315 0 0 0 chr10 32523699 32523734 -107793031 + (CA)n Simple_repeat Simple_repeat 1 35 0 1164 206 64 103 chr10 32523734 32523931 -107792834 + MLT1B LTR MaLR 183 386 -4 380 236 114 29 chr10 32523958 32524098 -107792667 - LTR67 LTR ERVL 0 557 406 597 241 97 5 chr10 32525003 32525198 -107791567 - HsTC2 DNA Tc2 -12 1886 1674 14753 175 52 21 chr10 32525250 32528229 -107788536 - L1PB1 LINE L1 0 6867 3981 210 37 0 0 chr10 32528229 32528256 -107788509 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 14753 175 52 21 chr10 32528256 32531322 -107785443 - L1PB1 LINE L1 -2886 3981 634 1245 127 5 0 chr10 32531322 32531519 -107785246 - L1PB1 LINE L1 -6663 200 3 1048 251 39 58 chr10 32531521 32531617 -107785148 - HsTC2 DNA Tc2 -277 1621 1525 2261 79 13 0 chr10 32531617 32531922 -107784843 - AluY SINE Alu -2 309 1 1048 251 39 58 chr10 32531922 32532184 -107784581 - HsTC2 DNA Tc2 -373 1525 1270 319 293 41 24 chr10 32532202 32532325 -107784440 - HsTC2 DNA Tc2 -1764 134 10 4380 109 11 11 chr10 32532452 32533064 -107783701 - LTR9 LTR ERV1 0 612 1 2588 138 18 35 chr10 32533508 32533943 -107782822 - MSTA LTR MaLR 0 428 1 836 226 48 66 chr10 32535219 32535438 -107781327 + MLT1E3 LTR MaLR 131 405 -219 2110 124 0 6 chr10 32535438 32535752 -107781013 + AluSx SINE Alu 1 312 0 836 226 48 66 chr10 32535752 32535829 -107780936 + MLT1E3 LTR MaLR 405 482 -142 1622 189 3 6 chr10 32535879 32536192 -107780573 - AluJo SINE Alu 0 312 1 458 264 28 38 chr10 32536373 32536818 -107779947 - L1M LINE L1 -743 5403 4982 1077 303 126 73 chr10 32536823 32536938 -107779827 + L2 LINE L2 1824 1931 -1383 612 194 0 62 chr10 32536938 32537067 -107779698 + FLAM_C SINE Alu 2 122 -11 1077 303 126 73 chr10 32537067 32537205 -107779560 + L2 LINE L2 1931 2060 -1254 2011 131 46 25 chr10 32537205 32537572 -107779193 + THE1C LTR MaLR 1 375 0 1077 303 126 73 chr10 32537572 32538307 -107778458 + L2 LINE L2 2060 2866 -448 612 190 2 9 chr10 32538359 32538479 -107778286 - MLT1C LTR MaLR 0 467 245 3890 107 14 12 chr10 32538509 32539090 -107777675 + L1PA13 LINE L1 5582 6163 0 198 0 0 0 chr10 32539999 32540021 -107776744 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1026 174 92 128 chr10 32540026 32540330 -107776435 - MER51A LTR ERV1 -82 552 3 180 0 0 0 chr10 32540723 32540743 -107776022 + (T)n Simple_repeat Simple_repeat 1 20 0 2203 103 0 0 chr10 32541054 32541346 -107775419 - AluSx SINE Alu -20 292 1 4653 102 110 107 chr10 32541575 32542968 -107773797 + pTR5 LTR ERV1 79 2438 0 1206 185 100 4 chr10 32543311 32543592 -107773173 - AluJo SINE Alu -4 308 1 1963 110 11 0 chr10 32543746 32544049 -107772716 - AluSq SINE Alu 0 306 1 186 363 29 20 chr10 32544261 32544363 -107772402 - MIR SINE MIR -10 252 150 1474 203 0 17 chr10 32544914 32545210 -107771555 - AluJo SINE Alu -1 311 21 1664 139 36 30 chr10 32545218 32545519 -107771246 - AluJb SINE Alu -9 303 1 5627 203 55 77 chr10 32545521 32546025 -107770740 - L1MC3 LINE L1 -216 7569 7056 288 0 0 0 chr10 32546025 32546057 -107770708 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2058 108 0 0 chr10 32546062 32546339 -107770426 - AluSg SINE Alu -33 277 1 5627 203 55 77 chr10 32546339 32546904 -107769861 - L1MC3 LINE L1 -733 7052 6476 756 187 0 15 chr10 32546904 32547038 -107769727 - FLAM_C SINE Alu -1 132 1 5627 203 55 77 chr10 32547038 32547227 -107769538 - L1MC3 LINE L1 -1309 6476 6284 2261 65 41 0 chr10 32547227 32547519 -107769246 + AluY SINE Alu 1 304 -7 5627 203 55 77 chr10 32547519 32547859 -107768906 - L1MC3 LINE L1 -1501 6284 5998 28 61 0 0 chr10 32547960 32548009 -107768756 + AT_rich Low_complexity Low_complexity 1 49 0 249 196 0 0 chr10 32548651 32548702 -107768063 + (CA)n Simple_repeat Simple_repeat 1 51 0 2484 80 3 3 chr10 32548723 32549035 -107767730 + AluSx SINE Alu 1 312 0 304 326 23 8 chr10 32549181 32549313 -107767452 + GA-rich Low_complexity Low_complexity 4 137 0 245 121 0 0 chr10 32549399 32549432 -107767333 - tRNA-Gly-GGC tRNA tRNA -41 33 1 2212 102 3 10 chr10 32549533 32549827 -107766938 + AluSq SINE Alu 5 296 -17 945 186 150 5 chr10 32550002 32550222 -107766543 + ORSL DNA AcHobo 24 275 0 23 0 0 0 chr10 32550424 32550447 -107766318 + AT_rich Low_complexity Low_complexity 1 23 0 851 153 0 0 chr10 32550447 32550565 -107766200 - FLAM_C SINE Alu -25 118 1 529 263 109 53 chr10 32551173 32551493 -107765272 + L2 LINE L2 2936 3273 -40 186 71 0 0 chr10 32551502 32551530 -107765235 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 235 239 73 55 chr10 32551604 32551713 -107765052 - MIR3 SINE MIR -8 200 90 314 304 26 0 chr10 32552085 32552200 -107764565 - MIR SINE MIR -111 151 34 378 74 0 0 chr10 32552412 32552466 -107764299 + (TG)n Simple_repeat Simple_repeat 2 55 0 1386 175 91 82 chr10 32552490 32552531 -107764234 - L1MC5 LINE L1 -48 7913 7874 1593 180 4 11 chr10 32552531 32552834 -107763931 + AluJb SINE Alu 7 307 0 1386 175 91 82 chr10 32552834 32553288 -107763477 - L1MC5 LINE L1 -87 7874 7413 277 224 0 0 chr10 32553286 32553344 -107763421 - L1MC4a LINE L1 -1884 5924 5867 * 1732 121 8 88 chr10 32553429 32553691 -107763074 - L1MA4 LINE L1 -3 6297 6070 1495 195 17 28 chr10 32553691 32553978 -107762787 - AluJo SINE Alu -15 297 14 1732 121 8 88 chr10 32553978 32554078 -107762687 - L1MA4 LINE L1 -230 6070 5964 623 254 90 92 chr10 32554139 32554475 -107762290 - L1MC4a LINE L1 -2058 5750 5414 840 130 0 8 chr10 32554475 32554598 -107762167 - FLAM_C SINE Alu -11 122 1 623 254 90 92 chr10 32554598 32554717 -107762048 - L1MC4a LINE L1 -2394 5414 5296 2211 105 0 30 chr10 32554875 32555179 -107761586 + AluSx SINE Alu 1 295 -17 352 342 80 13 chr10 32555274 32555499 -107761266 - MLT1I LTR MaLR -7 402 163 293 256 28 3 chr10 32555496 32555596 -107761169 - MLT1I LTR MaLR -270 139 38 * 751 160 0 8 chr10 32556491 32556616 -107760149 + AluJo SINE Alu 11 134 -178 2344 103 0 0 chr10 32556922 32557222 -107759543 + AluSx SINE Alu 1 300 -12 513 326 6 6 chr10 32557561 32557736 -107759029 + MLT1I LTR MaLR 232 406 -3 1117 234 191 37 chr10 32558137 32558457 -107758308 + HAL1 LINE L1 454 870 -1637 2127 103 3 23 chr10 32558457 32558758 -107758007 - AluSx SINE Alu -17 295 1 1117 234 191 37 chr10 32558758 32558902 -107757863 + HAL1 LINE L1 870 990 -1517 32 75 0 0 chr10 32558912 32558979 -107757786 + AT_rich Low_complexity Low_complexity 1 67 0 228 200 0 0 chr10 32559740 32559795 -107756970 + (CA)n Simple_repeat Simple_repeat 2 56 0 380 223 195 8 chr10 32559986 32560149 -107756616 + L1ME LINE L1 5470 5659 -511 2491 58 0 39 chr10 32560157 32560466 -107756299 + AluY SINE Alu 1 297 -14 846 177 19 13 chr10 32560469 32560627 -107756138 + AluJo/FRAM SINE Alu 138 296 -16 198 0 0 0 chr10 32560695 32560717 -107756048 + (A)n Simple_repeat Simple_repeat 1 22 0 279 79 0 0 chr10 32562425 32562463 -107754302 + (TG)n Simple_repeat Simple_repeat 2 39 0 726 184 0 22 chr10 32563098 32563234 -107753531 + FLAM_A SINE Alu 1 133 0 239 93 23 0 chr10 32563235 32563278 -107753487 + (GGAA)n Simple_repeat Simple_repeat 4 47 0 1708 133 0 16 chr10 32563962 32564218 -107752547 + AluSx SINE Alu 1 252 -60 183 42 0 0 chr10 32564234 32564258 -107752507 + (CAA)n Simple_repeat Simple_repeat 1 24 0 1107 161 0 11 chr10 32564631 32564811 -107751954 - FRAM SINE Alu -5 171 1 738 230 48 0 chr10 32565097 32565317 -107751448 - MIR SINE MIR -3 259 31 448 308 11 38 chr10 32566022 32566207 -107750558 + MIR SINE MIR 11 190 -72 308 308 5 43 chr10 32567481 32567692 -107749073 - MER63 DNA MER1_type -7 1681 1 423 144 62 12 chr10 32568741 32568901 -107747864 + (TAGA)n Simple_repeat Simple_repeat 2 169 0 2994 97 0 19 chr10 32568904 32569287 -107747478 - MER57B LTR ERV1 -27 407 31 5070 148 44 35 chr10 32569287 32570232 -107746533 + LTR13 LTR ERVK 1 954 0 2994 97 0 19 chr10 32570232 32570262 -107746503 - MER57B LTR ERV1 -403 31 2 635 46 11 0 chr10 32570262 32570349 -107746416 + (TAGA)n Simple_repeat Simple_repeat 2 89 0 859 271 173 46 chr10 32570411 32570593 -107746172 + MLT1L LTR MaLR 5 162 -453 1976 115 56 7 chr10 32570593 32570881 -107745884 - AluSx SINE Alu -10 302 1 859 271 173 46 chr10 32570881 32571200 -107745565 + MLT1L LTR MaLR 162 570 -45 964 194 106 13 chr10 32571211 32571438 -107745327 - L1MB8 LINE L1 -5 6173 5926 1992 149 10 0 chr10 32571438 32571734 -107745031 - AluSx SINE Alu -13 299 1 779 163 0 0 chr10 32571736 32571871 -107744894 - L1MB8 LINE L1 -352 5822 5688 14773 127 20 15 chr10 32571871 32574062 -107742703 + Tigger1 DNA MER2_type 1 2179 -239 1904 145 10 0 chr10 32574062 32574351 -107742414 - AluSx SINE Alu -18 294 3 14773 127 20 15 chr10 32574351 32574368 -107742397 + Tigger1 DNA MER2_type 2179 2194 -224 1637 88 0 4 chr10 32574368 32574594 -107742171 - L1PB1 LINE L1 0 6151 5927 14773 127 20 15 chr10 32574594 32574687 -107742078 + Tigger1 DNA MER2_type 2194 2315 -103 572 247 54 11 chr10 32574688 32574874 -107741891 - L1MB8 LINE L1 -692 5492 5299 * 6094 114 8 3 chr10 32574850 32575747 -107741018 - L1PA15 LINE L1 -1 6164 5264 1148 158 5 0 chr10 32575736 32575938 -107740827 + L1PA15 LINE L1 5080 5282 -864 * 642 131 56 9 chr10 32575938 32576045 -107740720 + Tigger1 DNA MER2_type 2307 2418 0 305 240 0 1 chr10 32576045 32576126 -107740639 - L1M4 LINE L1 -485 5689 5610 341 293 149 24 chr10 32576334 32576583 -107740182 - LTR50 LTR ERVL -112 683 404 278 278 49 52 chr10 32576928 32577089 -107739676 - LTR50 LTR ERVL -308 215 59 382 287 41 33 chr10 32577107 32577308 -107739457 + MIR SINE MIR 12 212 -50 1520 183 38 14 chr10 32577931 32578220 -107738545 + AluJo SINE Alu 1 296 -16 260 333 58 17 chr10 32579134 32579254 -107737511 + HAL1 LINE L1 8 132 -2375 626 311 56 16 chr10 32579521 32579843 -107736922 - L1MC4a LINE L1 -1881 5927 5593 587 251 51 53 chr10 32579837 32580370 -107736395 - L1MC4 LINE L1 -109 7933 7292 * 343 299 96 45 chr10 32580401 32580681 -107736084 - L1MC4a LINE L1 -515 5606 5336 420 280 85 0 chr10 32580734 32580852 -107735913 - MLT1J2 LTR MaLR -72 378 251 27 0 0 0 chr10 32581202 32581229 -107735536 + AT_rich Low_complexity Low_complexity 1 27 0 195 222 0 0 chr10 32581313 32581358 -107735407 + (CATATA)n Simple_repeat Simple_repeat 2 46 0 410 354 58 23 chr10 32581378 32581723 -107735042 - L1MC4a LINE L1 -1007 5139 4783 2461 74 0 0 chr10 32581953 32582249 -107734516 - AluY SINE Alu -15 296 1 800 273 27 33 chr10 32582673 32583003 -107733762 + L1MEc LINE L1 1552 1879 -4517 1668 156 0 76 chr10 32583006 32583144 -107733621 + AluJo SINE Alu 9 111 -201 1970 147 0 22 chr10 32583144 32583457 -107733308 + AluSx SINE Alu 1 306 -6 1668 156 0 76 chr10 32583457 32583632 -107733133 + AluJo SINE Alu 111 298 -14 781 156 0 43 chr10 32583641 32583762 -107733003 + AluJo SINE Alu 2 118 -194 270 0 0 0 chr10 32583762 32583792 -107732973 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 781 156 0 43 chr10 32583792 32583811 -107732954 + AluJo SINE Alu 118 136 -176 314 368 39 15 chr10 32583812 32584016 -107732749 + L1MEc LINE L1 1883 2091 -4305 326 306 90 37 chr10 32584069 32584385 -107732380 + MLT1I LTR MaLR 80 386 -23 349 273 0 23 chr10 32584493 32584581 -107732184 + L2 LINE L2 3146 3231 -41 3004 177 26 3 chr10 32584581 32585146 -107731619 + L1PA16 LINE L1 5588 6165 -1 417 39 0 0 chr10 32585806 32585857 -107730908 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 325 158 0 0 chr10 32587180 32587237 -107729528 - MIR SINE MIR -21 241 185 204 143 0 0 chr10 32587252 32587294 -107729471 + MIR SINE MIR 170 211 -51 326 281 22 82 chr10 32587511 32587646 -107729119 - MER5B DNA MER1_type 0 178 52 192 111 0 0 chr10 32587649 32587685 -107729080 + (TC)n Simple_repeat Simple_repeat 1 36 0 228 67 0 0 chr10 32587698 32587728 -107729037 + (TG)n Simple_repeat Simple_repeat 2 31 0 2212 126 3 3 chr10 32588597 32588906 -107727859 + AluSx SINE Alu 1 309 -3 1109 301 83 23 chr10 32589186 32589410 -107727355 + LTR67 LTR ERVL 40 249 -308 3167 189 12 67 chr10 32589410 32590141 -107726624 - LTR8 LTR ERV1 0 691 1 1109 301 83 23 chr10 32590141 32590397 -107726368 + LTR67 LTR ERVL 249 549 -8 263 288 119 69 chr10 32590561 32590721 -107726044 + MLT1K LTR MaLR 53 220 -368 434 304 119 22 chr10 32590771 32590998 -107725767 + MLT1K LTR MaLR 332 580 -8 2055 141 0 0 chr10 32591132 32591431 -107725334 + AluSx SINE Alu 4 302 -10 201 336 62 9 chr10 32591444 32591557 -107725208 - L2 LINE L2 -8 3305 3187 2642 171 2 2 chr10 32591676 32592104 -107724661 - MSTA LTR MaLR 0 428 1 1850 147 7 0 chr10 32593319 32593592 -107723173 + AluSx SINE Alu 5 279 -33 234 0 0 0 chr10 32593592 32593618 -107723147 + (CA)n Simple_repeat Simple_repeat 1 26 0 466 244 56 111 chr10 32593640 32593874 -107722891 + MLT1F1 LTR MaLR 1 221 -372 921 217 102 86 chr10 32593945 32594327 -107722438 + MLT1F1 LTR MaLR 180 567 0 446 215 132 57 chr10 32595411 32595639 -107721126 + L1MC4a LINE L1 6058 6302 -1506 789 188 0 0 chr10 32595706 32595839 -107720926 - FLAM_C SINE Alu 0 133 1 1144 235 132 41 chr10 32595950 32596388 -107720377 + MLT2B1 LTR ERVL 3 480 -40 314 162 38 0 chr10 32596399 32596472 -107720293 + (TA)n Simple_repeat Simple_repeat 1 81 -28 1819 159 0 0 chr10 32596472 32596748 -107720017 - AluSx SINE Alu -18 294 19 314 162 38 0 chr10 32596748 32596779 -107719986 + (TA)n Simple_repeat Simple_repeat 81 109 0 293 116 0 0 chr10 32596787 32596837 -107719928 + MLT2C2 LTR ERVL 417 457 -7 858 229 102 32 chr10 32596842 32597025 -107719740 + L1MC4a LINE L1 6411 6580 -1341 2298 103 0 0 chr10 32597025 32597326 -107719439 + AluSg SINE Alu 1 301 -9 858 229 102 32 chr10 32597326 32597540 -107719225 + L1MC4a LINE L1 6580 6928 -993 297 0 0 0 chr10 32597540 32597573 -107719192 + (GA)n Simple_repeat Simple_repeat 1 33 0 907 294 36 29 chr10 32597573 32597984 -107718781 + L1MC4 LINE L1 7082 7495 -547 495 288 115 56 chr10 32597968 32598279 -107718486 + L1MC4 LINE L1 7311 7602 -440 * 2183 128 0 3 chr10 32598279 32598584 -107718181 - AluSx SINE Alu -8 304 1 495 288 115 56 chr10 32598584 32598762 -107718003 + L1MC4 LINE L1 7602 7935 -107 330 98 0 0 chr10 32598782 32598833 -107717932 + (GA)n Simple_repeat Simple_repeat 1 51 0 243 209 173 36 chr10 32598856 32598966 -107717799 + L1MC4 LINE L1 7918 8042 0 826 120 0 0 chr10 32600394 32600519 -107716246 - AluSc SINE Alu -6 303 179 293 299 58 29 chr10 32600994 32601168 -107715597 - MIR SINE MIR -37 225 47 1559 169 47 30 chr10 32601172 32601282 -107715483 + AluJo SINE Alu 1 108 -204 234 0 0 0 chr10 32601282 32601308 -107715457 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1559 169 47 30 chr10 32601308 32601498 -107715267 + AluJo SINE Alu 108 306 -6 2024 93 82 0 chr10 32601513 32601792 -107714973 + AluSp SINE Alu 5 306 -7 336 290 57 91 chr10 32602503 32602673 -107714092 + L2 LINE L2 2817 2991 -281 2438 119 50 45 chr10 32602673 32602724 -107714041 + MSTB LTR MaLR 5 54 -372 2418 100 0 3 chr10 32602724 32603035 -107713730 + AluSx SINE Alu 1 310 -2 2438 119 50 45 chr10 32603035 32603403 -107713362 + MSTB LTR MaLR 54 426 0 336 290 57 91 chr10 32603403 32603704 -107713061 + L2 LINE L2 2991 3272 0 2058 102 7 4 chr10 32603810 32604084 -107712681 + AluSq SINE Alu 29 303 -10 26 0 0 0 chr10 32604800 32604826 -107711939 + AT_rich Low_complexity Low_complexity 1 26 0 2156 115 0 3 chr10 32604826 32605113 -107711652 - AluSx SINE Alu -26 286 1 1747 171 4 11 chr10 32605374 32605688 -107711077 + AluJo SINE Alu 5 316 0 2344 103 3 0 chr10 32605791 32606093 -107710672 + AluSx SINE Alu 1 303 -9 365 175 165 10 chr10 32606903 32607000 -107709765 + MLT1L LTR MaLR 491 602 -13 1863 135 17 7 chr10 32607199 32607487 -107709278 - AluJo SINE Alu -16 296 6 442 246 116 113 chr10 32609185 32609446 -107707319 - MLT1J1 LTR MaLR 0 446 182 2351 99 0 0 chr10 32609446 32609749 -107707016 - AluSc SINE Alu -6 303 1 442 246 116 113 chr10 32609749 32609849 -107706916 - MLT1J1 LTR MaLR -264 182 84 2808 173 27 60 chr10 32609849 32610481 -107706284 + LTR36 LTR ERV1 1 611 0 2055 116 0 4 chr10 32611006 32611283 -107705482 - AluSx SINE Alu -36 276 1 1044 172 23 0 chr10 32611503 32611677 -107705088 + MSTB LTR MaLR 2 179 -247 671 169 25 0 chr10 32611666 32611784 -107704981 + MSTB LTR MaLR 312 432 0 * 1929 268 117 50 chr10 32612377 32613089 -107703676 + L1MEd LINE L1 157 820 -5490 1256 210 15 96 chr10 32613089 32613318 -107703447 + AluJo SINE Alu 1 196 -116 1821 159 0 46 chr10 32613318 32613645 -107703120 + AluJb SINE Alu 1 312 0 1256 210 15 96 chr10 32613645 32613749 -107703016 + AluJo SINE Alu 196 307 -5 1929 268 117 50 chr10 32613749 32613882 -107702883 + L1MEd LINE L1 820 943 -5367 1135 177 39 9 chr10 32613882 32614114 -107702651 + L1MB5 LINE L1 5928 6166 -8 1929 268 117 50 chr10 32614114 32614538 -107702227 + L1MEd LINE L1 943 1570 -4740 2360 106 3 0 chr10 32614538 32614839 -107701926 + AluSx SINE Alu 1 302 -10 2187 110 3 7 chr10 32615206 32615507 -107701258 + AluSx SINE Alu 10 309 -3 21 36 0 0 chr10 32615791 32615819 -107700946 + AT_rich Low_complexity Low_complexity 1 28 0 406 253 180 16 chr10 32616018 32616212 -107700553 + L1ME4a LINE L1 5547 5772 -349 473 228 39 8 chr10 32616259 32616386 -107700379 - MIR SINE MIR -10 252 122 210 319 9 71 chr10 32616432 32616545 -107700220 - MIR SINE MIR -128 134 29 231 227 176 25 chr10 32616734 32616853 -107699912 + L1ME4a LINE L1 5984 6120 -1 1252 157 32 101 chr10 32616948 32617134 -107699631 + L1MA9 LINE L1 5998 6152 -160 1954 162 0 0 chr10 32617134 32617437 -107699328 + AluJb SINE Alu 2 304 -8 1252 157 32 101 chr10 32617437 32617588 -107699177 + L1MA9 LINE L1 6152 6312 0 21 26 0 26 chr10 32617588 32617600 -107699165 + AT_rich Low_complexity Low_complexity 1 12 -26 1867 145 3 26 chr10 32617600 32617911 -107698854 - AluJb SINE Alu -8 304 1 21 26 0 26 chr10 32617911 32617937 -107698828 + AT_rich Low_complexity Low_complexity 12 38 0 221 250 0 18 chr10 32618245 32618301 -107698464 - L2 LINE L2 -1 3271 3217 692 127 71 16 chr10 32619049 32619175 -107697590 + FLAM_C SINE Alu 1 133 0 904 211 6 6 chr10 32619317 32619492 -107697273 - AluSg/x SINE Alu -17 293 119 835 128 0 48 chr10 32619497 32619506 -107697259 + (GAAA)n Simple_repeat Simple_repeat 2 10 -170 2251 139 0 0 chr10 32619506 32619816 -107696949 + AluSx SINE Alu 1 310 -2 835 128 0 48 chr10 32619816 32619994 -107696771 + (GAAA)n Simple_repeat Simple_repeat 10 180 0 227 270 48 0 chr10 32620818 32620881 -107695884 + MIR3 SINE MIR 122 187 -21 403 235 61 0 chr10 32620978 32621076 -107695689 + MIR SINE MIR 38 141 -67 2263 102 3 0 chr10 32621089 32621384 -107695381 + AluSx SINE Alu 1 296 -16 281 169 0 70 chr10 32621414 32621485 -107695280 + FLAM SINE Alu 68 133 0 595 269 75 11 chr10 32621501 32621783 -107694982 + L1MC4a LINE L1 4360 4659 -1487 1327 148 51 5 chr10 32621798 32622014 -107694751 + AluSg/x SINE Alu 82 307 -3 257 298 26 0 chr10 32622202 32622316 -107694449 + L1P LINE L1 4885 5001 -1145 1856 140 32 4 chr10 32622329 32622608 -107694157 - AluSx SINE Alu -25 287 1 38 22 0 0 chr10 32622730 32622775 -107693990 + AT_rich Low_complexity Low_complexity 1 45 0 926 242 108 71 chr10 32622845 32623082 -107693683 + L1MC4a LINE L1 5254 5481 -2327 2017 130 6 32 chr10 32623082 32623398 -107693367 + AluSx SINE Alu 1 308 -4 926 242 108 71 chr10 32623398 32623763 -107693002 + L1MC4a LINE L1 5481 5878 -1930 1038 153 0 19 chr10 32623980 32624169 -107692596 + AluSg/x SINE Alu 130 315 0 1582 164 20 27 chr10 32624496 32624789 -107691976 + AluJb SINE Alu 1 291 -21 518 236 154 50 chr10 32625147 32625269 -107691496 + MER5C DNA MER1_type 39 147 -177 2137 112 0 7 chr10 32625269 32625577 -107691188 - AluSx SINE Alu 0 306 1 518 236 154 50 chr10 32625577 32625712 -107691053 + MER5C DNA MER1_type 147 324 0 1421 135 42 75 chr10 32625759 32625973 -107690792 + MER33 DNA MER1_type 1 202 -2383 832 161 0 7 chr10 32625973 32626122 -107690643 + L1MB3 LINE L1 6033 6180 -3 1421 135 42 75 chr10 32626122 32626240 -107690525 + MER33 DNA MER1_type 202 322 -2 230 81 27 0 chr10 32626428 32626465 -107690300 + (TG)n Simple_repeat Simple_repeat 1 38 0 2011 142 137 11 chr10 32626763 32627143 -107689622 + MSTA LTR MaLR 1 428 0 669 128 10 0 chr10 32627365 32627467 -107689298 + AluJb SINE Alu 5 107 -205 201 74 0 0 chr10 32627467 32627494 -107689271 + (GA)n Simple_repeat Simple_repeat 2 28 0 249 62 0 0 chr10 32627498 32627530 -107689235 + (GGGAA)n Simple_repeat Simple_repeat 3 34 0 528 124 35 18 chr10 32627530 32627643 -107689122 + GA-rich Low_complexity Low_complexity 3 117 0 215 267 126 44 chr10 32627657 32627792 -107688973 - L2 LINE L2 -191 3081 2936 291 209 45 27 chr10 32627805 32627915 -107688850 + L1MEd LINE L1 14 125 -5994 2003 129 17 0 chr10 32628050 32628337 -107688428 - AluSx SINE Alu -13 299 8 1340 225 40 67 chr10 32628337 32628741 -107688024 + MLT2C2 LTR ERVL 3 394 -70 411 21 0 0 chr10 32628741 32628789 -107687976 + (CA)n Simple_repeat Simple_repeat 2 49 0 1340 225 40 67 chr10 32628789 32628859 -107687906 + MLT2C2 LTR ERVL 394 464 0 311 290 97 0 chr10 32629027 32629120 -107687645 + L1MEd LINE L1 433 534 -5585 24 32 0 0 chr10 32629133 32629164 -107687601 + AT_rich Low_complexity Low_complexity 1 31 0 1346 243 34 42 chr10 32629169 32629304 -107687461 - L1ME1 LINE L1 -19 6942 6807 1838 176 7 10 chr10 32629304 32629606 -107687159 - AluJb SINE Alu -11 301 1 1346 243 34 42 chr10 32629606 32629918 -107686847 - L1ME1 LINE L1 -154 6807 6499 5440 219 100 36 chr10 32629919 32631683 -107685082 - L1ME1 LINE L1 -894 6047 4171 467 160 14 1 chr10 32631710 32631792 -107684973 + MLT1A1 LTR MaLR 241 463 -42 2292 124 0 0 chr10 32631823 32632129 -107684636 - AluSx SINE Alu -6 306 1 269 228 79 10 chr10 32632130 32632231 -107684534 - L1ME1 LINE L1 -2845 4096 3989 1882 241 94 29 chr10 32632266 32632781 -107683984 - L1ME1 LINE L1 -4821 2120 1640 2058 147 3 0 chr10 32632781 32633087 -107683678 - AluSx SINE Alu -5 307 1 1882 241 94 29 chr10 32633087 32633514 -107683251 - L1ME1 LINE L1 -5301 1640 1242 2074 138 3 0 chr10 32633514 32633805 -107682960 + AluSx SINE Alu 1 292 -20 1882 241 94 29 chr10 32633805 32634067 -107682698 - L1ME1 LINE L1 -5699 1242 844 431 252 93 81 chr10 32634273 32634519 -107682246 - L1ME1 LINE L1 -5900 523 275 1523 211 0 16 chr10 32634519 32634827 -107681938 - AluJo SINE Alu -9 303 1 456 99 0 0 chr10 32634837 32634908 -107681857 + (TA)n Simple_repeat Simple_repeat 1 71 0 292 94 0 57 chr10 32634913 32634966 -107681799 - FLAM_A SINE Alu -2 131 82 312 309 34 28 chr10 32635027 32635205 -107681560 - L1ME1 LINE L1 -6221 202 24 * 805 209 34 28 chr10 32635193 32635370 -107681395 - L1ME LINE L1 -522 5642 5465 * 4173 198 46 53 chr10 32635367 32637649 -107679116 - L1MB4 LINE L1 -192 5988 3730 366 272 45 24 chr10 32637754 32637955 -107678810 + L1MEd LINE L1 1074 1311 -4862 2266 119 3 0 chr10 32637973 32638276 -107678489 + AluSx SINE Alu 1 304 -8 459 0 0 0 chr10 32638582 32638633 -107678132 + (TA)n Simple_repeat Simple_repeat 2 52 0 391 74 0 0 chr10 32638634 32638688 -107678077 - Alu SINE Alu 0 302 249 1872 164 22 16 chr10 32638803 32639169 -107677596 + L1 LINE L1 3958 4325 -1821 2260 81 7 17 chr10 32639173 32639508 -107677257 - AluSx SINE Alu 0 312 1 2339 94 16 0 chr10 32639613 32639920 -107676845 - AluSx SINE Alu 0 312 1 2104 127 0 0 chr10 32640652 32640935 -107675830 - AluSx SINE Alu -29 283 1 4424 103 111 107 chr10 32641165 32642557 -107674208 + pTR5 LTR ERV1 79 2438 0 1302 174 97 17 chr10 32642893 32643181 -107673584 - AluJo SINE Alu -1 311 1 2088 110 11 0 chr10 32643335 32643638 -107673127 - AluSq SINE Alu 0 306 1 1577 196 0 18 chr10 32644519 32644799 -107671966 - AluJo SINE Alu -17 295 21 1786 133 36 33 chr10 32644807 32645109 -107671656 - AluJb SINE Alu -9 303 1 5719 201 53 76 chr10 32645111 32645615 -107671150 - L1MC3 LINE L1 -216 7569 7055 288 0 0 0 chr10 32645615 32645647 -107671118 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2183 108 0 0 chr10 32645652 32645929 -107670836 - AluSg SINE Alu -33 277 1 5719 201 53 76 chr10 32645929 32646496 -107670269 - L1MC3 LINE L1 -734 7051 6472 751 187 0 15 chr10 32646496 32646630 -107670135 - FLAM_C SINE Alu -1 132 1 5719 201 53 76 chr10 32646630 32646819 -107669946 - L1MC3 LINE L1 -1313 6472 6280 2372 61 41 3 chr10 32646819 32647112 -107669653 + AluY SINE Alu 1 304 -7 5719 201 53 76 chr10 32647112 32647452 -107669313 - L1MC3 LINE L1 -1505 6280 5998 28 61 0 0 chr10 32647553 32647602 -107669163 + AT_rich Low_complexity Low_complexity 1 49 0 249 196 0 0 chr10 32648244 32648295 -107668470 + (CA)n Simple_repeat Simple_repeat 1 51 0 2484 80 3 3 chr10 32648316 32648628 -107668137 + AluSx SINE Alu 1 312 0 304 326 23 8 chr10 32648774 32648906 -107667859 + GA-rich Low_complexity Low_complexity 4 137 0 245 121 0 0 chr10 32648992 32649025 -107667740 - tRNA-Gly-GGC tRNA tRNA -41 33 1 2212 102 3 10 chr10 32649126 32649420 -107667345 + AluSq SINE Alu 5 296 -17 945 186 150 5 chr10 32649595 32649815 -107666950 + ORSL DNA AcHobo 24 275 0 23 0 0 0 chr10 32650017 32650040 -107666725 + AT_rich Low_complexity Low_complexity 1 23 0 851 153 0 0 chr10 32650040 32650158 -107666607 - FLAM_C SINE Alu -25 118 1 645 263 109 53 chr10 32650766 32651086 -107665679 + L2 LINE L2 2936 3273 -40 186 71 0 0 chr10 32651095 32651123 -107665642 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 264 266 46 28 chr10 32651197 32651306 -107665459 - MIR3 SINE MIR -8 200 90 360 339 26 2 chr10 32651620 32651817 -107664948 - MIR SINE MIR -13 249 8 378 74 0 0 chr10 32652005 32652059 -107664706 + (TG)n Simple_repeat Simple_repeat 2 55 0 1600 176 4 11 chr10 32652124 32652427 -107664338 + AluJb SINE Alu 7 307 0 1171 177 30 61 chr10 32652518 32652880 -107663885 - L1MC5 LINE L1 -198 7763 7413 257 224 0 0 chr10 32652878 32652936 -107663829 - L1MC5 LINE L1 -1884 5924 5867 * 1652 116 14 94 chr10 32653021 32653283 -107663482 - L1MA4 LINE L1 -3 6297 6070 1526 195 17 28 chr10 32653283 32653570 -107663195 - AluJo SINE Alu -15 297 14 1652 116 14 94 chr10 32653570 32653670 -107663095 - L1MA4 LINE L1 -230 6070 5964 493 253 90 92 chr10 32653731 32654067 -107662698 - L1MC5 LINE L1 -2058 5750 5414 845 130 0 8 chr10 32654067 32654190 -107662575 - FLAM_C SINE Alu -11 122 1 493 253 90 92 chr10 32654190 32654307 -107662458 - L1MC5 LINE L1 -2394 5414 5298 2201 105 0 30 chr10 32654467 32654771 -107661994 + AluSx SINE Alu 1 295 -17 276 318 64 10 chr10 32654866 32655174 -107661591 - MLT1I LTR MaLR -7 402 52 198 0 0 0 chr10 32656480 32656502 -107660263 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 898 180 132 44 chr10 32656507 32656779 -107659986 - MER51A LTR ERV1 -82 552 257 189 0 0 0 chr10 32657203 32657224 -107659541 + (T)n Simple_repeat Simple_repeat 1 21 0 189 0 0 0 chr10 32657517 32657538 -107659227 + (TA)n Simple_repeat Simple_repeat 2 22 0 2038 117 7 3 chr10 32657538 32657828 -107658937 - AluSx SINE Alu -21 291 1 2005 127 30 3 chr10 32657845 32658145 -107658620 - AluSx SINE Alu -4 308 1 180 0 0 0 chr10 32658566 32658586 -107658179 + (T)n Simple_repeat Simple_repeat 1 20 0 509 147 9 18 chr10 32658888 32658997 -107657768 + L1MA7 LINE L1 4660 4767 -1379 654 130 32 8 chr10 32659004 32659127 -107657638 + L1MA7 LINE L1 5814 5939 -352 347 283 75 0 chr10 32659182 32659288 -107657477 + L1ME LINE L1 5597 5710 -411 28 86 0 0 chr10 32659377 32659447 -107657318 + AT_rich Low_complexity Low_complexity 1 70 0 266 143 63 16 chr10 32659462 32659588 -107657177 + (TA)n Simple_repeat Simple_repeat 1 132 0 274 212 47 0 chr10 32659611 32659696 -107657069 + (TA)n Simple_repeat Simple_repeat 2 90 0 540 218 45 6 chr10 32659696 32659852 -107656913 - FAM SINE Alu -23 162 1 284 299 0 0 chr10 32660239 32660346 -107656419 + C-rich Low_complexity Low_complexity 4 110 0 1655 165 0 0 chr10 32660367 32660627 -107656138 - AluSx SINE Alu -52 260 1 389 289 142 25 chr10 32660709 32660948 -107655817 + L1ME LINE L1 5469 5735 -427 1607 187 87 9 chr10 32661007 32661434 -107655331 - L1 LINE L1 -1329 4817 4358 342 67 0 0 chr10 32661535 32661580 -107655185 + (TA)n Simple_repeat Simple_repeat 2 46 0 2228 129 0 0 chr10 32661583 32661885 -107654880 - AluSx SINE Alu -9 303 2 370 276 112 56 chr10 32662216 32662706 -107654059 + L1MDa LINE L1 2452 2913 -3627 1971 147 0 0 chr10 32662706 32663031 -107653734 + AluSx SINE Alu 1 325 0 370 276 112 56 chr10 32663031 32663820 -107652945 + L1MDa LINE L1 2913 3797 -2743 672 190 9 0 chr10 32663841 32663957 -107652808 + FLAM_C SINE Alu 1 117 -26 297 0 0 0 chr10 32663961 32663994 -107652771 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 264 264 27 9 chr10 32663996 32664106 -107652659 + L1MDa LINE L1 3820 3931 -2609 821 144 31 19 chr10 32664292 32664452 -107652313 - MSTD LTR MaLR -234 162 1 351 0 0 0 chr10 32664495 32664523 -107652242 + (TG)n Simple_repeat Simple_repeat 1 67 0 351 0 0 0 chr10 32664523 32664562 -107652203 + (TG)n Simple_repeat Simple_repeat 2 40 0 654 183 7 28 chr10 32664587 32664729 -107652036 + MLT1B LTR MaLR 192 330 -60 1965 85 11 0 chr10 32664730 32665012 -107651753 + THE1B-int LTR MaLR 1296 1580 0 1834 142 49 26 chr10 32665012 32665356 -107651409 + THE1B LTR MaLR 1 352 -12 11271 148 24 13 chr10 32665361 32668608 -107648157 + L1MA3 LINE L1 3020 6305 0 7840 180 23 22 chr10 32668605 32668620 -107648145 + L1 LINE L1 2915 2928 -3218 * 2108 79 28 3 chr10 32668620 32668910 -107647855 + AluY SINE Alu 1 297 -14 7840 180 23 22 chr10 32668910 32670745 -107646020 + L1 LINE L1 2928 4767 -1379 654 130 32 8 chr10 32670752 32670875 -107645890 + L1MA7 LINE L1 5814 5939 -352 361 274 75 0 chr10 32670930 32671036 -107645729 + L1ME LINE L1 5597 5710 -411 28 86 0 0 chr10 32671125 32671195 -107645570 + AT_rich Low_complexity Low_complexity 1 70 0 266 143 63 16 chr10 32671210 32671336 -107645429 + (TA)n Simple_repeat Simple_repeat 1 132 0 274 212 47 0 chr10 32671359 32671444 -107645321 + (TA)n Simple_repeat Simple_repeat 1 89 0 803 211 12 6 chr10 32671444 32671605 -107645160 - FAM SINE Alu -13 162 1 376 268 10 0 chr10 32671614 32671711 -107645054 - MIR SINE MIR -11 251 154 238 225 40 92 chr10 32671711 32671884 -107644881 - MER104 DNA Tc2 -13 167 4 317 229 60 24 chr10 32671886 32671969 -107644796 - MIR SINE MIR -107 155 70 1723 132 0 129 chr10 32672016 32672356 -107644409 + AluJo SINE Alu 1 296 -6 1671 134 43 0 chr10 32673036 32673289 -107643476 + AluSg SINE Alu 37 300 -10 225 132 38 38 chr10 32673632 32673685 -107643080 + MADE1 DNA Mariner 1 53 -27 22 0 0 0 chr10 32673771 32673793 -107642972 + AT_rich Low_complexity Low_complexity 1 22 0 28293 118 14 61 chr10 32673825 32680236 -107636529 + L1PA8 LINE L1 12 6105 -67 281 147 44 0 chr10 32680237 32680305 -107636460 + L1P LINE L1 4641 4711 -1435 * 383 88 0 12 chr10 32680290 32680361 -107636404 + L1PA8 LINE L1 6090 6167 -1 2970 135 0 17 chr10 32680368 32680850 -107635915 + LTR8 LTR ERV1 154 627 -64 1913 129 34 74 chr10 32680852 32681035 -107635730 + THE1B LTR MaLR 1 164 -200 2272 50 14 0 chr10 32681035 32681369 -107635396 + AluY SINE Alu 1 338 0 1913 129 34 74 chr10 32681369 32681563 -107635202 + THE1B LTR MaLR 164 364 0 3094 89 0 0 chr10 32681563 32681989 -107634776 + THE1B-int LTR MaLR 1 426 -1154 193 283 33 65 chr10 32682041 32682133 -107634632 - MIR3 SINE MIR -18 190 102 4770 146 13 68 chr10 32682340 32682487 -107634278 - MER4D LTR ERV1 0 903 749 2148 124 20 0 chr10 32682487 32682786 -107633979 - AluSx SINE Alu -7 305 1 4770 146 13 68 chr10 32682786 32683594 -107633171 - MER4D LTR ERV1 -154 749 1 22 0 0 0 chr10 32683721 32683743 -107633022 + AT_rich Low_complexity Low_complexity 1 22 0 2300 95 0 3 chr10 32683765 32684061 -107632704 + AluSc SINE Alu 1 295 -14 427 206 31 49 chr10 32684462 32684600 -107632165 + MIR SINE MIR 63 200 -62 226 154 0 0 chr10 32684653 32684692 -107632073 - MSTA LTR MaLR 0 426 388 1569 132 0 4 chr10 32684692 32684919 -107631846 + AluSg/x SINE Alu 87 312 0 207 100 0 0 chr10 32684924 32684954 -107631811 + (GAAAA)n Simple_repeat Simple_repeat 2 31 0 2297 137 17 27 chr10 32684954 32685357 -107631408 - MSTA LTR MaLR -29 399 1 1290 191 83 13 chr10 32685720 32685792 -107630973 + MER58B DNA MER1_type 6 72 -2348 219 36 0 0 chr10 32685792 32685820 -107630945 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1290 191 83 13 chr10 32685820 32686061 -107630704 + MER58B DNA MER1_type 72 341 0 765 299 52 0 chr10 32686106 32686317 -107630448 - MIR SINE MIR -10 252 31 414 0 0 0 chr10 32686569 32686615 -107630150 + (TG)n Simple_repeat Simple_repeat 1 46 0 879 266 80 71 chr10 32687617 32688169 -107628596 + LTR1B LTR ERV1 33 589 -237 278 349 0 0 chr10 32688418 32688504 -107628261 - L2 LINE L2 -26 3287 3202 2193 200 184 83 chr10 32688586 32689512 -107627253 - LTR28 LTR ERV1 0 1020 2 554 288 36 4 chr10 32689977 32690146 -107626619 - MER5B DNA MER1_type 0 178 17 263 214 71 51 chr10 32690172 32690270 -107626495 - MLT1I LTR MaLR -270 139 40 2301 202 115 40 chr10 32691133 32691314 -107625451 + HAL1 LINE L1 965 1131 -1376 2105 120 17 3 chr10 32691314 32691615 -107625150 + AluSq SINE Alu 1 305 -8 2301 202 115 40 chr10 32691615 32692283 -107624482 + HAL1 LINE L1 1131 1878 -629 1878 133 29 16 chr10 32693078 32693386 -107623379 + AluSq SINE Alu 1 312 -1 271 189 54 14 chr10 32693415 32693489 -107623276 + L1MC/D LINE L1 5812 5888 -1920 2333 114 0 0 chr10 32693682 32693989 -107622776 - AluSx SINE Alu -5 307 1 447 276 142 25 chr10 32694071 32694310 -107622455 + L1ME LINE L1 5469 5735 -427 6830 166 36 29 chr10 32694369 32694832 -107621933 - L1 LINE L1 -1329 4817 4359 2171 86 7 17 chr10 32694832 32695163 -107621602 + AluSx SINE Alu 5 312 0 6830 166 36 29 chr10 32695163 32695539 -107621226 - L1 LINE L1 -1787 4359 3987 2054 118 3 3 chr10 32695539 32695852 -107620913 - AluSx SINE Alu 0 313 1 6830 166 36 29 chr10 32695852 32695919 -107620846 - L1 LINE L1 -2159 3987 3922 2816 110 36 0 chr10 32695919 32696338 -107620427 + MER57B LTR ERV1 1 434 0 6830 166 36 29 chr10 32696338 32696966 -107619799 - L1 LINE L1 -2224 3922 3269 1473 174 25 165 chr10 32696970 32697486 -107619279 - MER70B LTR ERVL -134 444 1 823 208 60 18 chr10 32697489 32697702 -107619063 - L1 LINE L1 -2882 3264 3035 1822 100 112 4 chr10 32697702 32697971 -107618794 - AluSg SINE Alu -12 298 1 823 208 60 18 chr10 32697971 32698041 -107618724 - L1 LINE L1 -3111 3035 2969 1172 229 48 0 chr10 32698042 32698374 -107618391 + L1ME1 LINE L1 4950 5297 -849 5839 146 38 12 chr10 32698378 32700088 -107616677 - L1PB2 LINE L1 0 6151 4372 258 56 0 0 chr10 32700088 32700124 -107616641 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 5839 146 38 12 chr10 32700124 32700519 -107616246 - L1PB2 LINE L1 -1779 4372 3988 559 230 0 0 chr10 32700534 32700669 -107616096 + L1ME1 LINE L1 5326 5460 -702 869 215 45 21 chr10 32700669 32700911 -107615854 + LTR52 LTR ERVL 1 248 -173 1207 144 0 26 chr10 32700911 32701106 -107615659 - AluJb SINE Alu -7 305 116 543 135 58 0 chr10 32701106 32701210 -107615555 + FLAM_C SINE Alu 2 111 -32 498 169 40 197 chr10 32701379 32701416 -107615349 + LTR52 LTR ERVL 212 253 -168 1850 146 0 56 chr10 32701416 32701610 -107615155 - AluJb SINE Alu -7 305 135 1867 151 0 35 chr10 32701610 32701922 -107614843 + AluJo SINE Alu 1 301 -11 1850 146 0 56 chr10 32701922 32702050 -107614715 - AluJb SINE Alu -177 135 1 498 169 40 197 chr10 32702050 32702077 -107614688 + LTR52 LTR ERVL 253 283 -138 698 106 19 0 chr10 32702077 32702181 -107614584 - U6 snRNA snRNA -1 106 1 498 169 40 197 chr10 32702181 32702364 -107614401 + LTR52 LTR ERVL 283 421 0 1094 211 96 148 chr10 32702367 32702696 -107614069 + L1ME1 LINE L1 5460 5807 -359 481 116 0 0 chr10 32702696 32702765 -107614000 + AluJ/FRAM SINE Alu 229 297 -15 1094 211 96 148 chr10 32702765 32703064 -107613701 + L1ME1 LINE L1 5807 6120 -46 391 250 96 0 chr10 32702965 32703101 -107613664 + L1MA10 LINE L1 6169 6317 -17 * 203 238 24 0 chr10 32703199 32703241 -107613524 - L2 LINE L2 -1152 2162 2120 1112 228 152 90 chr10 32703285 32704133 -107612632 - HAL1 LINE L1 -744 1763 863 620 149 203 0 chr10 32704146 32704294 -107612471 - MLT1E LTR MaLR -5 500 323 749 128 45 0 chr10 32704591 32704724 -107612041 + MER85 DNA T2_type 1 139 0 709 269 51 62 chr10 32704792 32705148 -107611617 - MLT1E LTR MaLR -237 356 6 225 288 0 17 chr10 32705294 32705353 -107611412 - L2 LINE L2 -16 3256 3199 22 0 0 0 chr10 32705972 32705994 -107610771 + AT_rich Low_complexity Low_complexity 1 22 0 1142 133 0 6 chr10 32706875 32707033 -107609732 + AluSx SINE Alu 1 157 -155 204 182 0 0 chr10 32707084 32707128 -107609637 + GA-rich Low_complexity Low_complexity 1 44 0 233 146 21 0 chr10 32707187 32707235 -107609530 + GA-rich Low_complexity Low_complexity 3 51 0 566 254 109 55 chr10 32707845 32707943 -107608822 + L1MEd LINE L1 922 1013 -5106 2346 107 0 0 chr10 32707943 32708252 -107608513 + AluSx SINE Alu 1 309 -3 566 254 109 55 chr10 32708252 32708428 -107608337 + L1MEd LINE L1 1013 1211 -4908 951 227 65 57 chr10 32708500 32709006 -107607759 + L1MC5 LINE L1 7404 7913 -48 2145 126 7 0 chr10 32709374 32709667 -107607098 - AluSx SINE Alu -17 295 1 2313 94 16 0 chr10 32709772 32710079 -107606686 - AluSx SINE Alu 0 312 1 2251 96 0 0 chr10 32710811 32711092 -107605673 - AluSg SINE Alu -29 281 1 963 108 38 181 chr10 32711216 32711559 -107605206 - L1PBa LINE L1 -4763 2100 1807 1047 158 5 35 chr10 32711566 32711768 -107604997 + AluJb SINE Alu 108 303 -9 2171 127 0 0 chr10 32711854 32712154 -107604611 + AluSx SINE Alu 1 300 -12 21 0 0 0 chr10 32713022 32713043 -107603722 + AT_rich Low_complexity Low_complexity 1 21 0 2135 112 14 0 chr10 32713140 32713435 -107603330 + AluSx SINE Alu 1 299 -13 2169 111 3 23 chr10 32713446 32713752 -107603013 + AluSx SINE Alu 1 300 -12 280 254 149 45 chr10 32714328 32714462 -107602303 - MIR SINE MIR -21 241 94 834 189 26 0 chr10 32714510 32714663 -107602102 - AluSg/x SINE Alu -18 294 138 2172 101 44 0 chr10 32714701 32714998 -107601767 + AluSq SINE Alu 1 310 -3 997 219 20 65 chr10 32715040 32715134 -107601631 - MER8 DNA MER2_type 0 239 142 2267 77 40 7 chr10 32715134 32715432 -107601333 + AluY SINE Alu 1 308 -3 997 219 20 65 chr10 32715432 32715584 -107601181 - MER8 DNA MER2_type -97 142 4 772 189 0 0 chr10 32716091 32716218 -107600547 - FLAM_A SINE Alu -3 130 4 23 0 0 0 chr10 32717266 32717289 -107599476 + AT_rich Low_complexity Low_complexity 1 23 0 2169 107 3 0 chr10 32717440 32717729 -107599036 + AluSx SINE Alu 23 312 0 240 59 0 0 chr10 32718333 32718367 -107598398 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 204 286 0 36 chr10 32718620 32718676 -107598089 + MIR SINE MIR 87 140 -68 2143 136 0 0 chr10 32719068 32719370 -107597395 - AluSx SINE Alu -10 302 1 2246 106 17 0 chr10 32719435 32719736 -107597029 + AluSx SINE Alu 1 306 -6 2171 112 0 14 chr10 32720684 32720980 -107595785 - AluSx SINE Alu -20 292 1 1278 162 21 30 chr10 32722826 32723060 -107593705 + AluJb SINE Alu 27 258 -54 1729 176 20 0 chr10 32723071 32723367 -107593398 + AluJb SINE Alu 5 306 -6 190 333 117 18 chr10 32723403 32723514 -107593251 - L2 LINE L2 -556 2758 2637 223 322 223 0 chr10 32723813 32723934 -107592831 + L2 LINE L2 3123 3270 -2 291 54 0 0 chr10 32724060 32724097 -107592668 + (TTTTA)n Simple_repeat Simple_repeat 3 39 0 624 38 0 0 chr10 32724101 32724181 -107592584 - HY3 scRNA scRNA -2 99 20 233 139 0 0 chr10 32724667 32724703 -107592062 + Alu SINE Alu 177 212 -88 2130 112 30 3 chr10 32725676 32725980 -107590785 + AluSx SINE Alu 1 312 0 1536 139 19 15 chr10 32725992 32726251 -107590514 + AluSx SINE Alu 1 260 -52 2302 82 0 3 chr10 32726459 32726752 -107590013 - AluY SINE Alu -19 292 1 1567 203 0 3 chr10 32726841 32727127 -107589638 + AluJo SINE Alu 1 285 -27 1548 139 24 133 chr10 32727178 32727510 -107589255 + AluJo SINE Alu 1 296 -6 25 0 0 0 chr10 32727513 32727538 -107589227 + AT_rich Low_complexity Low_complexity 1 25 0 1817 118 61 17 chr10 32727664 32727961 -107588804 + AluSx SINE Alu 1 310 -2 2031 134 3 13 chr10 32728407 32728714 -107588051 + AluSx SINE Alu 1 304 -8 24 0 0 0 chr10 32729240 32729264 -107587501 + AT_rich Low_complexity Low_complexity 1 24 0 2084 116 0 38 chr10 32730149 32730486 -107586279 + AluSx SINE Alu 2 327 0 2263 118 0 0 chr10 32730508 32730804 -107585961 + AluSx SINE Alu 3 298 -14 483 304 145 31 chr10 32731092 32731451 -107585314 + L1ME LINE L1 5318 5717 -404 1926 102 0 16 chr10 32731926 32732181 -107584584 + AluSx SINE Alu 23 273 -39 29 0 0 0 chr10 32733385 32733414 -107583351 + AT_rich Low_complexity Low_complexity 1 29 0 1706 171 63 0 chr10 32734219 32734506 -107582259 + AluJo SINE Alu 1 305 -7 406 352 62 6 chr10 32735704 32735866 -107580899 - MIR3 SINE MIR -17 191 21 428 88 0 0 chr10 32736164 32736221 -107580544 + U6 snRNA snRNA 50 106 -1 1785 116 20 3 chr10 32736222 32736523 -107580242 + L1PBa LINE L1 1608 1913 -4950 5437 82 152 8 chr10 32736529 32737445 -107579320 + L1P LINE L1 1 1048 -5098 246 180 82 0 chr10 32742853 32742914 -107573851 + MER94 DNA DNA 1 66 -68 1693 183 3 24 chr10 32742925 32743220 -107573545 + AluJo SINE Alu 1 289 -23 227 340 140 68 chr10 32743289 32743524 -107573241 + L2 LINE L2 3007 3258 -14 478 114 25 13 chr10 32743990 32744069 -107572696 + AluS SINE Alu 220 299 -13 800 88 0 96 chr10 32744189 32744325 -107572440 + AluSg/x SINE Alu 187 309 0 995 121 0 0 chr10 32744340 32744472 -107572293 + AluSg SINE Alu 2 133 -177 2206 105 20 3 chr10 32744472 32744776 -107571989 + AluSx SINE Alu 1 309 -3 549 311 52 16 chr10 32744822 32745131 -107571634 + L1ME LINE L1 47 366 -5704 485 254 105 28 chr10 32745143 32745391 -107571374 - LTR41 LTR ERVL -7 766 500 1263 246 126 9 chr10 32745519 32746447 -107570318 + L1ME LINE L1 2117 3184 -2896 10294 157 26 11 chr10 32746563 32749722 -107567043 + L1MA3 LINE L1 3091 6298 -7 2319 83 27 5 chr10 32749752 32750324 -107566441 - L1P3 LINE L1 -551 5603 5024 246 200 84 21 chr10 32750511 32750606 -107566159 - LTR41 LTR ERVL -672 101 1 2231 108 20 0 chr10 32750825 32751131 -107565634 - AluSx SINE Alu 0 312 1 21 0 0 0 chr10 32751328 32751349 -107565416 + AT_rich Low_complexity Low_complexity 1 21 0 2203 127 0 0 chr10 32751778 32752086 -107564679 - AluSc SINE Alu 0 309 2 5108 84 3 0 chr10 32752346 32753004 -107563761 + PABL_A LTR ERV1 1 660 0 227 357 164 7 chr10 32753056 32753196 -107563569 + MIR SINE MIR 47 208 -54 1575 177 111 143 chr10 32753572 32754302 -107562463 - LTR8A LTR ERV1 -20 707 1 8353 104 2 25 chr10 32754645 32755838 -107560927 + L1P3 LINE L1 5 1170 -5291 294 247 27 0 chr10 32756546 32756619 -107560146 - MLT1K LTR MaLR -6 582 508 407 152 0 0 chr10 32756689 32756755 -107560010 - AluJ/FLAM SINE Alu -245 67 2 225 211 0 0 chr10 32756949 32756987 -107559778 + tRNA-Glu-GAG tRNA tRNA 3 40 -35 418 210 0 34 chr10 32756997 32757122 -107559643 + L1MC/D LINE L1 5724 5837 -305 1074 277 37 35 chr10 32757859 32758263 -107558502 + MLT1I LTR MaLR 1 405 -4 2076 87 28 3 chr10 32758800 32759089 -107557676 - AluSx SINE Alu -16 296 1 27 29 0 0 chr10 32759362 32759396 -107557369 + AT_rich Low_complexity Low_complexity 1 34 0 2034 100 0 4 chr10 32759535 32759816 -107556949 - AluSx SINE Alu -32 280 1 741 174 23 0 chr10 32759926 32760058 -107556707 + AluJb SINE Alu 2 136 -176 2390 58 0 0 chr10 32760062 32760356 -107556409 + AluY SINE Alu 1 294 -17 30 0 0 0 chr10 32760356 32760386 -107556379 + AT_rich Low_complexity Low_complexity 1 30 0 889 284 51 24 chr10 32760472 32760726 -107556039 - MIR SINE MIR -1 261 1 1404 170 46 32 chr10 32760846 32761128 -107555637 + AluSx SINE Alu 1 286 -26 29 0 0 0 chr10 32761131 32761160 -107555605 + AT_rich Low_complexity Low_complexity 1 29 0 2034 128 0 0 chr10 32761601 32761905 -107554860 + AluSx SINE Alu 1 304 -8 1864 145 7 10 chr10 32762427 32762737 -107554028 + AluSx SINE Alu 1 309 -3 1029 262 135 64 chr10 32762916 32762961 -107553804 + L1MDa LINE L1 2431 2471 -4069 1998 112 3 3 chr10 32762961 32763257 -107553508 + AluSx SINE Alu 12 307 -5 1029 262 135 64 chr10 32763257 32763940 -107552825 + L1MDa LINE L1 2471 3218 -3322 2177 89 3 0 chr10 32764365 32764656 -107552109 + AluSp SINE Alu 1 292 -21 700 175 35 0 chr10 32764679 32764793 -107551972 + FLAM_C SINE Alu 1 118 -15 35 0 0 0 chr10 32764804 32764839 -107551926 + AT_rich Low_complexity Low_complexity 1 35 0 1481 160 46 25 chr10 32765206 32765487 -107551278 + AluJo SINE Alu 1 287 -25 497 24 48 24 chr10 32765487 32765570 -107551195 + (CATAA)n Simple_repeat Simple_repeat 2 86 0 329 241 63 99 chr10 32765590 32765614 -107551151 + L1MDa LINE L1 3491 3514 -3026 2119 107 0 3 chr10 32765614 32765922 -107550843 + AluSq SINE Alu 1 307 -6 329 241 63 99 chr10 32765922 32766064 -107550701 + L1MDa LINE L1 3514 3652 -2888 2346 84 0 0 chr10 32766064 32766375 -107550390 + AluY SINE Alu 1 311 0 329 241 63 99 chr10 32766375 32766398 -107550367 + L1MDa LINE L1 3652 3674 -2866 1965 134 20 0 chr10 32766427 32766733 -107550032 + AluSx SINE Alu 1 312 0 345 325 30 53 chr10 32766966 32767135 -107549630 + L1MDa LINE L1 4117 4281 -2259 377 214 0 11 chr10 32767275 32767364 -107549401 - L1MB3 LINE L1 -86 6097 6010 2123 115 0 0 chr10 32767859 32768154 -107548611 + AluSx SINE Alu 1 295 -17 898 178 43 0 chr10 32768294 32768457 -107548308 + FAM SINE Alu 1 170 -5 1836 145 11 64 chr10 32769013 32769179 -107547586 - MER44D DNA MER2_type -1882 609 436 2032 112 11 0 chr10 32769179 32769466 -107547299 + AluSx SINE Alu 1 290 -22 1836 145 11 64 chr10 32769466 32769657 -107547108 - MER44D DNA MER2_type -2055 436 1 1558 118 169 0 chr10 32770389 32770644 -107546121 + AluSx SINE Alu 1 298 -4 1919 135 0 13 chr10 32770787 32771091 -107545674 - AluSx SINE Alu -12 300 1 268 350 29 58 chr10 32771159 32771433 -107545332 + L2 LINE L2 2596 2861 -453 245 330 119 9 chr10 32771502 32771611 -107545154 + L2 LINE L2 2948 3068 -204 2041 117 3 0 chr10 32771928 32772226 -107544539 - AluSx SINE Alu -13 299 1 256 236 92 90 chr10 32772307 32772686 -107544079 - L1ME4a LINE L1 -134 5987 5599 357 323 109 80 chr10 32772856 32772987 -107543778 + L3 LINE CR1 683 809 -768 1929 118 30 3 chr10 32772987 32773283 -107543482 + AluSx SINE Alu 1 304 -8 357 323 109 80 chr10 32773283 32773712 -107543053 + L3 LINE CR1 809 1259 -318 349 200 14 0 chr10 32774286 32774356 -107542409 + MLT1K LTR MaLR 518 588 0 350 296 244 24 chr10 32774416 32774629 -107542136 + L3 LINE CR1 1316 1575 -2 247 256 43 119 chr10 32774776 32774832 -107541933 + MIR SINE MIR 2 61 -177 2229 93 3 0 chr10 32774832 32775132 -107541633 + AluSx SINE Alu 1 301 -11 247 256 43 119 chr10 32775132 32775270 -107541495 + MIR SINE MIR 61 176 -62 310 252 99 23 chr10 32775580 32775711 -107541054 + MIR SINE MIR 72 212 -50 198 0 0 0 chr10 32776502 32776524 -107540241 + (A)n Simple_repeat Simple_repeat 1 22 0 2033 113 7 10 chr10 32776795 32777097 -107539668 + AluSx SINE Alu 3 303 -9 227 309 66 29 chr10 32777239 32777423 -107539342 - MIR3 SINE MIR -30 178 37 414 270 99 52 chr10 32777629 32777786 -107538979 - MIR SINE MIR -29 233 62 2113 103 3 0 chr10 32777786 32778076 -107538689 + AluSx SINE Alu 1 291 -21 414 270 99 52 chr10 32778076 32778129 -107538636 - MIR SINE MIR -200 62 13 1939 143 3 0 chr10 32778359 32778659 -107538106 - AluSx SINE Alu -9 303 3 2480 134 55 0 chr10 32778790 32779194 -107537571 + MSTB LTR MaLR 1 426 0 300 241 226 0 chr10 32779482 32779615 -107537150 - L1ME LINE L1 -459 5662 5500 2563 130 21 3 chr10 32779650 32780035 -107536730 + MSTA LTR MaLR 16 407 -21 529 315 46 71 chr10 32780058 32780697 -107536068 - L1ME LINE L1 -737 5427 4807 187 330 82 46 chr10 32780738 32780932 -107535833 + L2 LINE L2 3025 3225 -47 449 132 105 26 chr10 32780987 32781101 -107535664 + MER53 DNA DNA 3 125 -64 2078 115 0 3 chr10 32781605 32781900 -107534865 - AluSx SINE Alu -18 294 1 462 309 237 10 chr10 32781973 32782556 -107534209 - L2 LINE L2 -28 3285 2553 490 254 18 0 chr10 32783196 32783310 -107533455 + MER5B DNA MER1_type 2 117 -61 1561 162 3 20 chr10 32783797 32784093 -107532672 + AluJo SINE Alu 1 291 -21 271 169 88 0 chr10 32784153 32784216 -107532549 + MIR SINE MIR 79 145 -63 2208 104 3 0 chr10 32786207 32786515 -107530250 + AluSg SINE Alu 1 309 -1 360 0 0 0 chr10 32786567 32786607 -107530158 + (CA)n Simple_repeat Simple_repeat 2 41 0 22 35 0 0 chr10 32788760 32788789 -107527976 + AT_rich Low_complexity Low_complexity 1 29 0 348 302 151 44 chr10 32789830 32790055 -107526710 + L3 LINE CR1 1011 1259 -318 349 200 14 0 chr10 32790628 32790698 -107526067 + MLT1K LTR MaLR 518 588 0 314 285 248 33 chr10 32790758 32790972 -107525793 + L3 LINE CR1 1316 1575 -2 247 256 43 119 chr10 32791118 32791174 -107525591 + MIR SINE MIR 2 61 -177 2249 90 3 0 chr10 32791174 32791474 -107525291 + AluSx SINE Alu 1 301 -11 247 256 43 119 chr10 32791474 32791612 -107525153 + MIR SINE MIR 61 176 -62 310 252 99 23 chr10 32791922 32792053 -107524712 + MIR SINE MIR 72 212 -50 198 0 0 0 chr10 32792844 32792866 -107523899 + (A)n Simple_repeat Simple_repeat 1 22 0 2033 113 7 10 chr10 32793137 32793439 -107523326 + AluSx SINE Alu 3 303 -9 227 309 66 29 chr10 32793582 32793766 -107522999 - MIR3 SINE MIR -30 178 37 390 273 106 0 chr10 32793972 32794104 -107522661 - MIR SINE MIR -29 233 88 2033 121 3 0 chr10 32794129 32794427 -107522338 + AluSx SINE Alu 1 299 -13 219 340 130 0 chr10 32794753 32794853 -107521912 - L2 LINE L2 -212 3060 2948 268 350 29 58 chr10 32794922 32795196 -107521569 - L2 LINE L2 -453 2861 2596 1919 135 0 13 chr10 32795264 32795568 -107521197 + AluSx SINE Alu 1 300 -12 1579 114 169 0 chr10 32795709 32795964 -107520801 - AluSx SINE Alu -4 298 1 207 88 29 0 chr10 32799554 32799588 -107517177 + (CCCCCA)n Simple_repeat Simple_repeat 6 40 0 899 169 7 0 chr10 32800735 32800889 -107515876 - 7SLRNA srpRNA srpRNA -71 249 95 328 293 165 0 chr10 32801627 32801760 -107515005 - MIR SINE MIR -6 256 102 209 32 0 32 chr10 32801818 32801849 -107514916 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1644 159 30 0 chr10 32801850 32801996 -107514769 - AluSx SINE Alu -32 280 121 513 0 0 0 chr10 32801996 32802053 -107514712 + (TG)n Simple_repeat Simple_repeat 1 57 0 1644 159 30 0 chr10 32802053 32802177 -107514588 - AluSx SINE Alu -191 121 2 238 342 7 0 chr10 32802951 32803103 -107513662 + CT-rich Low_complexity Low_complexity 1 153 0 225 0 0 0 chr10 32803332 32803357 -107513408 + (CAAAA)n Simple_repeat Simple_repeat 4 28 0 325 163 155 105 chr10 32804529 32804763 -107512002 - MIR SINE MIR -10 252 16 1732 168 27 7 chr10 32805827 32806119 -107510646 + AluSx SINE Alu 1 298 -14 1952 162 0 0 chr10 32807223 32807525 -107509240 + AluSx SINE Alu 1 302 -10 301 252 24 11 chr10 32808275 32808377 -107508388 - MIR SINE MIR -64 144 62 193 237 132 26 chr10 32808606 32808682 -107508083 - MIR SINE MIR -70 192 109 210 180 0 60 chr10 32809377 32809427 -107507338 + (TATATG)n Simple_repeat Simple_repeat 6 52 0 2151 133 3 0 chr10 32809741 32810049 -107506716 + AluSx SINE Alu 1 309 -3 803 192 6 13 chr10 32810374 32810530 -107506235 + MER5A DNA MER1_type 2 156 -33 2405 100 3 0 chr10 32810880 32811189 -107505576 + AluSp SINE Alu 1 310 -3 1737 167 4 4 chr10 32811591 32811866 -107504899 + AluJo SINE Alu 1 275 -37 583 261 141 22 chr10 32811974 32812318 -107504447 + L1ME LINE L1 5317 5701 -458 23 33 0 0 chr10 32812673 32812703 -107504062 + AT_rich Low_complexity Low_complexity 1 30 0 788 195 39 19 chr10 32812757 32812973 -107503792 - L1MB7 LINE L1 -221 5963 5771 1580 157 86 4 chr10 32814214 32814494 -107502271 - AluJb SINE Alu -9 303 1 848 173 0 0 chr10 32814637 32814770 -107501995 + AluJ SINE Alu 1 133 -179 933 142 0 14 chr10 32815766 32815907 -107500858 + AluJ SINE Alu 118 256 -56 2164 110 0 13 chr10 32816440 32816740 -107500025 + AluJb SINE Alu 9 304 -8 280 285 26 33 chr10 32816769 32816920 -107499845 - L1ME4a LINE L1 -201 5920 5771 1749 157 47 30 chr10 32818630 32818929 -107497836 + AluJb SINE Alu 1 304 -8 1949 149 3 20 chr10 32819053 32819241 -107497524 - AluSx SINE Alu -15 297 114 3563 119 39 47 chr10 32819241 32819860 -107496905 - LTR18B LTR ERVL 0 614 1 1949 149 3 20 chr10 32819860 32819973 -107496792 - AluSx SINE Alu -198 114 1 273 161 0 54 chr10 32820066 32820122 -107496643 - L1ME4a LINE L1 -360 5761 5709 * 287 197 43 51 chr10 32820118 32820235 -107496530 + L1ME LINE L1 5711 5826 -295 201 250 56 83 chr10 32820382 32820490 -107496275 + MIR3 SINE MIR 55 159 -49 1059 98 0 0 chr10 32820498 32820630 -107496135 + AluY SINE Alu 1 132 -179 2379 58 0 27 chr10 32820634 32820929 -107495836 + AluY SINE Alu 1 287 -24 456 313 33 62 chr10 32822016 32822384 -107494381 - MLT1K LTR MaLR -6 582 226 1561 189 38 58 chr10 32822454 32822850 -107493915 - MLT1B LTR MaLR 0 390 3 480 18 0 0 chr10 32822945 32823002 -107493763 + (CA)n Simple_repeat Simple_repeat 2 58 0 3008 250 76 38 chr10 32823411 32824536 -107492229 + HAL1 LINE L1 1304 2471 -36 1074 116 104 93 chr10 32824637 32824730 -107492035 + L1MA9 LINE L1 6051 6141 -171 1766 120 42 39 chr10 32824730 32824974 -107491791 - L1MA5 LINE L1 -2 6298 6051 1816 185 0 3 chr10 32824974 32825272 -107491493 - AluJb SINE Alu -15 297 1 1766 120 42 39 chr10 32825272 32825360 -107491405 - L1MA5 LINE L1 -249 6051 5965 1074 116 104 93 chr10 32825360 32825389 -107491376 + L1MA9 LINE L1 6141 6168 -144 180 0 0 0 chr10 32825389 32825409 -107491356 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1074 116 104 93 chr10 32825409 32825544 -107491221 + L1MA9 LINE L1 6168 6312 0 1895 97 93 0 chr10 32825580 32825837 -107490928 + AluSx SINE Alu 1 281 -31 351 0 0 0 chr10 32825839 32825878 -107490887 + (CA)n Simple_repeat Simple_repeat 2 40 0 429 265 8 6 chr10 32825926 32826050 -107490715 - MIR3 SINE MIR -48 160 41 569 202 39 8 chr10 32827519 32827648 -107489117 + MER94 DNA DNA 2 134 0 215 214 0 0 chr10 32827663 32827705 -107489060 + CT-rich Low_complexity Low_complexity 2 43 0 2484 69 0 3 chr10 32827761 32828064 -107488701 + AluSg1 SINE Alu 1 302 -7 1439 208 68 17 chr10 32828878 32828897 -107487868 - L1ME3 LINE L1 0 6162 6145 947 182 80 144 chr10 32828897 32828980 -107487785 + MSTD LTR MaLR 1 88 -308 2030 85 22 15 chr10 32828980 32829252 -107487513 - AluSc SINE Alu -14 295 22 947 182 80 144 chr10 32829252 32829591 -107487174 + MSTD LTR MaLR 88 396 0 1439 208 68 17 chr10 32829591 32829922 -107486843 - L1ME3 LINE L1 -17 6145 5794 2259 98 37 0 chr10 32829938 32830233 -107486532 - AluSg SINE Alu -4 306 1 600 292 116 5 chr10 32830569 32830785 -107485980 - MIR SINE MIR -21 241 2 256 133 0 0 chr10 32831461 32831506 -107485259 - AluJ/FLAM SINE Alu -218 84 40 287 259 0 7 chr10 32831555 32831690 -107485075 + (CA)n Simple_repeat Simple_repeat 2 135 0 27 0 0 0 chr10 32831899 32831926 -107484839 + AT_rich Low_complexity Low_complexity 1 27 0 1336 239 65 75 chr10 32831929 32832439 -107484326 + MER77 LTR ERV1 54 558 -47 611 208 32 8 chr10 32833222 32833347 -107483418 + MLT1A2 LTR MaLR 1 128 -246 19221 138 17 14 chr10 32833347 32836317 -107480448 + L1M1 LINE L1 27 3004 -4561 960 204 71 31 chr10 32836317 32836542 -107480223 - MER77 LTR ERV1 -196 409 176 2041 119 10 7 chr10 32836557 32836852 -107479913 + AluSx SINE Alu 1 296 -16 643 182 0 33 chr10 32836855 32836976 -107479789 - MER77 LTR ERV1 -484 121 5 335 225 25 0 chr10 32836987 32837067 -107479698 + MER5B DNA MER1_type 24 105 -73 1934 142 14 96 chr10 32837278 32837632 -107479133 - L1MB8 LINE L1 -55 6123 5808 790 146 23 0 chr10 32837632 32837762 -107479003 - FLAM_C SINE Alu 0 133 1 1934 142 14 96 chr10 32837762 32837836 -107478929 - L1MB8 LINE L1 -370 5808 5730 612 249 5 29 chr10 32838469 32838678 -107478087 - L1M4 LINE L1 -1721 4425 4222 2400 60 0 11 chr10 32838684 32839000 -107477765 + AluY SINE Alu 1 313 0 1222 137 0 11 chr10 32839000 32839182 -107477583 + AluSg/x SINE Alu 127 306 -4 2092 131 51 26 chr10 32839197 32839549 -107477216 + THE1B LTR MaLR 1 361 -3 1944 208 59 2 chr10 32839549 32840002 -107476763 - L1M4 LINE L1 -1923 4223 3742 284 327 137 0 chr10 32840002 32840155 -107476610 + L2 LINE L2 2616 2789 -525 1429 149 0 0 chr10 32840167 32840375 -107476390 - AluJo SINE Alu -18 294 87 705 313 68 26 chr10 32840387 32840756 -107476009 + L2 LINE L2 2793 3145 -168 189 0 0 0 chr10 32840756 32840777 -107475988 + (TTA)n Simple_repeat Simple_repeat 3 23 0 7651 26 0 0 chr10 32840777 32841763 -107475002 - L1PA4 LINE L1 -18 6137 5152 705 313 68 26 chr10 32841763 32841788 -107474977 + L2 LINE L2 3144 3203 -110 1569 196 0 11 chr10 32841843 32842124 -107474641 + AluJb SINE Alu 7 284 -28 459 239 13 45 chr10 32842149 32842304 -107474461 - L2 LINE L2 -45 3268 3119 904 222 56 65 chr10 32842320 32842376 -107474389 + L1MA9 LINE L1 5981 6036 -276 2115 107 16 16 chr10 32842376 32842685 -107474080 + AluSx SINE Alu 1 309 -3 904 222 56 65 chr10 32842685 32842934 -107473831 + L1MA9 LINE L1 6036 6283 -29 927 97 8 0 chr10 32842988 32843112 -107473653 - AluJb SINE Alu -186 126 2 1332 96 0 27 chr10 32843138 32843326 -107473439 - LTR8 LTR ERV1 -100 591 409 578 286 197 13 chr10 32843326 32843641 -107473124 - L2 LINE L2 -1415 1899 1527 2233 90 41 0 chr10 32843911 32844201 -107472564 - AluSx SINE Alu -10 302 1 1158 122 12 0 chr10 32844262 32844426 -107472339 - AluSg/x SINE Alu -12 300 135 1785 163 3 3 chr10 32844430 32844718 -107472047 - AluJb SINE Alu -24 288 1 639 217 32 26 chr10 32844730 32844906 -107471859 + L1P4 LINE L1 5593 5771 -403 2073 146 0 0 chr10 32845082 32845383 -107471382 + AluSx SINE Alu 1 301 -11 2054 163 0 0 chr10 32845398 32845704 -107471061 + AluSx SINE Alu 1 306 -6 1043 177 0 11 chr10 32845733 32845908 -107470857 + AluJo SINE Alu 1 173 -139 1987 125 66 0 chr10 32846190 32846479 -107470286 - AluSq SINE Alu -5 308 1 541 186 88 0 chr10 32846534 32846647 -107470118 - MER65C LTR ERV1 0 461 339 * 779 190 35 7 chr10 32846643 32846785 -107469980 - MER65C LTR ERV1 -313 148 3 192 231 0 0 chr10 32847145 32847184 -107469581 + MIR SINE MIR 35 73 -135 1974 160 3 3 chr10 32847240 32847552 -107469213 - AluSx SINE Alu 0 312 1 2324 107 3 0 chr10 32848035 32848335 -107468430 + AluSx SINE Alu 1 301 -11 2281 118 3 0 chr10 32848399 32848704 -107468061 + AluSp SINE Alu 1 306 -7 263 248 220 0 chr10 32848976 32849085 -107467680 - MIR SINE MIR -82 180 48 429 284 116 16 chr10 32849125 32849315 -107467450 + L1ME LINE L1 5597 5805 -316 306 158 58 12 chr10 32849320 32849491 -107467274 + (TA)n Simple_repeat Simple_repeat 2 180 0 400 218 47 18 chr10 32849511 32849681 -107467084 + (TA)n Simple_repeat Simple_repeat 1 175 0 588 121 0 0 chr10 32849683 32849774 -107466991 + (CA)n Simple_repeat Simple_repeat 2 92 0 841 214 19 0 chr10 32849780 32849939 -107466826 - FAM SINE Alu -13 162 1 307 243 9 56 chr10 32849948 32850055 -107466710 - MIR SINE MIR -11 251 150 2204 118 0 13 chr10 32850107 32850411 -107466354 + AluSx SINE Alu 1 300 -12 308 281 41 97 chr10 32850631 32850827 -107465938 + MER5A DNA MER1_type 4 188 -1 1582 188 53 0 chr10 32850892 32851174 -107465591 - AluJo SINE Alu -10 302 6 236 54 54 0 chr10 32851217 32851254 -107465511 + T-rich Low_complexity Low_complexity 2 40 0 746 162 0 0 chr10 32851256 32851373 -107465392 - FLAM_C SINE Alu -15 118 2 1295 146 130 24 chr10 32851657 32851811 -107464954 - AluJo SINE Alu 0 301 165 207 0 0 0 chr10 32851811 32851834 -107464931 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1295 146 130 24 chr10 32851834 32851953 -107464812 - AluJo SINE Alu -136 165 1 2114 139 0 0 chr10 32852484 32852785 -107463980 + AluSx SINE Alu 1 301 -11 1164 74 23 0 chr10 32852807 32852983 -107463782 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2083 136 3 3 chr10 32852988 32853298 -107463467 + AluSx SINE Alu 2 311 -1 189 245 38 0 chr10 32853765 32853818 -107462947 - MIR SINE MIR -133 129 75 482 127 0 0 chr10 32854000 32854071 -107462694 - Alu SINE Alu -9 301 231 519 255 79 47 chr10 32854191 32854469 -107462296 + L2 LINE L2 3027 3313 0 262 325 61 31 chr10 32855240 32855403 -107461362 + MIR SINE MIR 30 197 -65 344 314 8 8 chr10 32855529 32855647 -107461118 - MIR SINE MIR -102 160 43 1764 103 0 56 chr10 32856072 32856209 -107460556 + AluSq SINE Alu 1 120 -193 2223 92 0 21 chr10 32856209 32856535 -107460230 + AluSg SINE Alu 3 322 0 1764 103 0 56 chr10 32856535 32856648 -107460117 + AluSq SINE Alu 120 238 -75 1289 171 30 34 chr10 32856680 32856944 -107459821 + AluJo SINE Alu 35 297 -15 1483 217 40 42 chr10 32857001 32857317 -107459448 + MER63B DNA MER1_type 1 317 -745 1790 153 0 0 chr10 32857317 32857585 -107459180 - AluJb SINE Alu -11 301 34 1483 217 40 42 chr10 32857585 32857669 -107459096 + MER63B DNA MER1_type 317 400 -36 365 248 72 20 chr10 32858373 32858526 -107458239 + MIR SINE MIR 102 262 0 2147 138 0 0 chr10 32858542 32858846 -107457919 - AluSq SINE Alu -7 306 3 700 181 8 15 chr10 32858948 32859081 -107457684 + FLAM_C SINE Alu 2 133 -10 1125 200 77 82 chr10 32859221 32859274 -107457491 + MLT1A1 LTR MaLR 1 53 -312 3843 111 57 23 chr10 32859274 32859394 -107457371 - MER41B LTR ERV1 0 635 521 2250 102 20 0 chr10 32859394 32859687 -107457078 + AluSx SINE Alu 1 299 -13 3843 111 57 23 chr10 32859687 32860180 -107456585 - MER41B LTR ERV1 -114 521 1 1125 200 77 82 chr10 32860180 32860491 -107456274 + MLT1A1 LTR MaLR 53 363 -2 2118 138 13 0 chr10 32860656 32860961 -107455804 - AluSx SINE Alu -3 309 1 1521 178 34 14 chr10 32860968 32861261 -107455504 - AluJb SINE Alu -13 299 1 21 0 0 0 chr10 32861312 32861333 -107455432 + AT_rich Low_complexity Low_complexity 1 21 0 2298 105 0 10 chr10 32861624 32861928 -107454837 + AluSx SINE Alu 1 301 -11 702 146 0 0 chr10 32863112 32863215 -107453550 - FRAM SINE Alu -11 165 63 3744 78 58 37 chr10 32863215 32863789 -107452976 - LTR61 LTR ERV1 -9 586 1 1073 132 15 71 chr10 32863790 32863987 -107452778 - AluJb SINE Alu -126 186 1 2183 133 0 0 chr10 32864012 32864320 -107452445 + AluSx SINE Alu 2 309 -3 2191 121 3 3 chr10 32864349 32864655 -107452110 - AluSp SINE Alu -7 306 1 1900 126 0 21 chr10 32865571 32865856 -107450909 + AluJb SINE Alu 6 284 -28 428 0 19 0 chr10 32865856 32865908 -107450857 + (CATA)n Simple_repeat Simple_repeat 2 54 0 26 0 0 0 chr10 32866874 32866900 -107449865 + AT_rich Low_complexity Low_complexity 1 26 0 2363 70 3 0 chr10 32866900 32867187 -107449578 + AluSp SINE Alu 1 288 -25 1989 113 13 10 chr10 32867187 32867489 -107449276 - AluJo SINE Alu -3 309 7 279 0 0 0 chr10 32867624 32867655 -107449110 + (GA)n Simple_repeat Simple_repeat 1 31 0 26 23 0 23 chr10 32870182 32870207 -107446558 + AT_rich Low_complexity Low_complexity 1 26 -17 2297 67 32 0 chr10 32870207 32870489 -107446276 - AluSq SINE Alu -22 291 1 26 23 0 23 chr10 32870489 32870507 -107446258 + AT_rich Low_complexity Low_complexity 26 43 0 249 237 17 0 chr10 32871233 32871292 -107445473 + U7 snRNA snRNA 3 62 -1 771 233 0 59 chr10 32871978 32872197 -107444568 - MIR SINE MIR -26 236 31 297 208 69 0 chr10 32873329 32873401 -107443364 + MIR3 SINE MIR 110 186 -22 2045 134 3 0 chr10 32874173 32874472 -107442293 + AluSx SINE Alu 1 300 -12 2374 100 0 0 chr10 32876270 32876569 -107440196 - AluSx SINE Alu -13 299 1 376 263 60 24 chr10 32877401 32877563 -107439202 - L2 LINE L2 -213 3059 2893 536 326 4 34 chr10 32877944 32878180 -107438585 - L3 LINE CR1 -1 1576 1348 546 294 87 5 chr10 32878237 32878455 -107438310 + MIR SINE MIR 13 248 -14 183 328 0 0 chr10 32878869 32878936 -107437829 + L3 LINE CR1 622 688 -889 1999 136 7 7 chr10 32879021 32879316 -107437449 + AluJb SINE Alu 2 296 -16 1649 83 5 0 chr10 32879370 32879574 -107437191 + AluSp SINE Alu 77 281 -32 207 88 0 0 chr10 32879576 32879610 -107437155 + (TAAAA)n Simple_repeat Simple_repeat 4 37 0 190 255 0 0 chr10 32879782 32879829 -107436936 + L3b LINE CR1 1186 1232 -351 504 232 144 10 chr10 32879970 32880164 -107436601 + MIR SINE MIR 31 250 -12 2238 96 0 43 chr10 32880226 32880550 -107436215 + AluSx SINE Alu 1 310 -2 204 267 59 50 chr10 32880810 32880911 -107435854 + L2 LINE L2 3169 3270 -2 761 168 0 0 chr10 32881188 32881301 -107435464 - FLAM_C SINE Alu -25 118 6 2200 125 3 0 chr10 32881366 32881669 -107435096 + AluSx SINE Alu 1 304 -8 23 33 0 0 chr10 32881822 32881852 -107434913 + AT_rich Low_complexity Low_complexity 1 30 0 446 243 0 0 chr10 32881868 32881983 -107434782 - L1ME2 LINE L1 0 6164 6053 24 0 0 0 chr10 32881999 32882023 -107434742 + AT_rich Low_complexity Low_complexity 1 24 0 741 189 0 0 chr10 32882027 32882159 -107434606 - FLAM_C SINE Alu 0 133 2 223 329 24 0 chr10 32882231 32882316 -107434449 + L2 LINE L2 3209 3295 -18 2089 112 7 3 chr10 32883523 32883856 -107432909 - AluSx SINE Alu 0 312 1 1448 245 87 32 chr10 32883888 32884350 -107432415 + L1ME3A LINE L1 5556 6042 -128 1190 123 0 0 chr10 32884362 32884533 -107432232 - AluSg/x SINE Alu -5 307 137 327 257 44 0 chr10 32884549 32884662 -107432103 + L1ME3A LINE L1 6053 6170 0 1178 132 11 6 chr10 32884758 32884932 -107431833 - AluSx SINE Alu -137 175 1 2121 116 0 35 chr10 32885923 32886234 -107430531 + AluSq SINE Alu 1 300 -13 23 33 0 0 chr10 32886718 32886748 -107430017 + AT_rich Low_complexity Low_complexity 1 30 0 202 283 0 0 chr10 32887003 32887049 -107429716 - L2 LINE L2 -17 3255 3210 1678 159 45 24 chr10 32887175 32887311 -107429454 + AluJo SINE Alu 1 133 -179 2371 84 3 0 chr10 32887311 32887607 -107429158 + AluSp SINE Alu 1 297 -16 1678 159 45 24 chr10 32887607 32887759 -107429006 + AluJo SINE Alu 133 295 -17 1757 165 23 13 chr10 32887792 32888101 -107428664 - AluSx SINE Alu 0 312 1 413 280 100 7 chr10 32888156 32888306 -107428459 - MIR SINE MIR -51 211 48 28 48 0 0 chr10 32888347 32888389 -107428376 + AT_rich Low_complexity Low_complexity 1 42 0 616 173 0 72 chr10 32888871 32889010 -107427755 + FLAM_C SINE Alu 5 133 0 554 114 44 9 chr10 32889010 32889124 -107427641 + GA-rich Low_complexity Low_complexity 3 120 0 1096 147 13 100 chr10 32889462 32889693 -107427072 + AluJo SINE Alu 85 295 -17 688 122 2 4 chr10 32891289 32891422 -107425343 - L1MB1 LINE L1 -1 6167 6051 624 167 0 0 chr10 32891829 32891925 -107424840 - FLAM_C SINE Alu -21 122 27 2314 84 0 0 chr10 32891925 32892211 -107424554 + AluSg SINE Alu 10 295 -15 27 29 0 0 chr10 32892307 32892341 -107424424 + AT_rich Low_complexity Low_complexity 1 34 0 255 147 0 0 chr10 32892990 32893024 -107423741 + Alu SINE Alu 247 280 -21 186 43 0 0 chr10 32893024 32893047 -107423718 + (T)n Simple_repeat Simple_repeat 1 23 0 610 104 52 0 chr10 32893829 32893925 -107422840 - AluSg/x SINE Alu -6 304 204 1203 130 0 0 chr10 32893948 32894117 -107422648 - AluSc SINE Alu -20 289 121 1137 72 0 0 chr10 32894265 32894403 -107422362 - AluSq/x SINE Alu -175 138 1 2453 84 0 0 chr10 32894475 32894783 -107421982 - AluSg SINE Alu -2 308 1 187 273 18 0 chr10 32895172 32895227 -107421538 - MIR3 SINE MIR -28 180 125 554 157 56 46 chr10 32895350 32895458 -107421307 + AluJo/FLAM SINE Alu 2 110 -202 2596 50 0 0 chr10 32895458 32895755 -107421010 - AluSg SINE Alu -13 297 1 253 286 60 12 chr10 32895787 32895871 -107420894 + MLT1K LTR MaLR 311 398 -190 561 240 44 33 chr10 32896171 32896354 -107420411 - MLT1K LTR MaLR -5 583 399 1101 189 92 32 chr10 32896763 32897044 -107419721 - L1MC4 LINE L1 -2 8040 7743 257 264 66 0 chr10 32897117 32897208 -107419557 - L1MC4 LINE L1 -312 7730 7634 183 330 9 46 chr10 32897464 32897573 -107419192 - L2 LINE L2 -47 3225 3121 577 274 44 9 chr10 32898175 32898393 -107418372 + L1ME1 LINE L1 5931 6161 -5 634 168 63 0 chr10 32898425 32898568 -107418197 + L1MB5 LINE L1 5179 5330 -816 2281 166 77 0 chr10 32898577 32898992 -107417773 + L1MB5 LINE L1 5587 6033 -141 891 301 93 5 chr10 32899663 32900082 -107416683 - LTR16B LTR ERVL -4 460 5 2442 55 7 10 chr10 32901822 32902129 -107414636 + AluSp SINE Alu 1 306 -7 22 35 0 0 chr10 32905411 32905440 -107411325 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 32906141 32906162 -107410603 + AT_rich Low_complexity Low_complexity 1 21 0 1942 139 22 27 chr10 32906265 32906601 -107410164 - L1MC/D LINE L1 -703 5630 5295 2277 100 7 0 chr10 32906601 32906910 -107409855 - AluSq SINE Alu -2 311 1 1942 139 22 27 chr10 32906910 32906940 -107409825 - L1MC/D LINE L1 -1038 5295 5266 1501 161 7 4 chr10 32906964 32907243 -107409522 - L1MA7 LINE L1 -11 6280 6001 1652 101 65 0 chr10 32907243 32907519 -107409246 - L1PA13 LINE L1 -8 6155 5860 822 287 127 19 chr10 32907956 32908325 -107408440 + MLT1I LTR MaLR 1 409 0 847 190 83 5 chr10 32908540 32908745 -107408020 - L1MD2 LINE L1 -396 5963 5743 471 167 0 0 chr10 32908889 32908979 -107407786 + T-rich Low_complexity Low_complexity 1 90 0 275 279 58 0 chr10 32910262 32910348 -107406417 + L2 LINE L2 3161 3251 -21 4562 145 55 21 chr10 32920803 32921674 -107395091 + L1MA4 LINE L1 5395 6295 -5 2331 177 24 9 chr10 32921696 32922149 -107394616 + MER4D LTR ERV1 421 880 -23 29 70 0 0 chr10 32936188 32936245 -107380520 + AT_rich Low_complexity Low_complexity 1 57 0 282 290 7 76 chr10 32938157 32938302 -107378463 + MIR SINE MIR 10 144 -118 259 317 69 0 chr10 32939757 32939858 -107376907 + MIR SINE MIR 85 192 -70 665 267 19 6 chr10 32939984 32940145 -107376620 - MIR SINE MIR -75 187 25 332 218 103 0 chr10 32940473 32940560 -107376205 - L2 LINE L2 -2 3270 3175 299 53 0 0 chr10 32944751 32944789 -107371976 + (TA)n Simple_repeat Simple_repeat 2 39 0 2170 110 0 32 chr10 32944789 32945098 -107371667 - AluSg SINE Alu -11 299 1 1901 177 0 3 chr10 32945109 32945397 -107371368 - AluJo SINE Alu -25 287 1 292 358 8 30 chr10 32945404 32945538 -107371227 - MIR3 SINE MIR -67 141 11 1863 320 59 35 chr10 32949635 32950971 -107365794 + HERVL LTR ERVL 2832 4199 -1455 1506 54 19 0 chr10 32950977 32951182 -107365583 - MER11A LTR ERVK 0 1266 1058 1741 131 0 16 chr10 32952856 32953108 -107363657 - AluJb SINE Alu -64 248 1 23 22 0 44 chr10 32953111 32953130 -107363635 + AT_rich Low_complexity Low_complexity 1 19 -24 2121 141 0 0 chr10 32953130 32953436 -107363329 + AluSx SINE Alu 1 306 -6 23 22 0 44 chr10 32953436 32953461 -107363304 + AT_rich Low_complexity Low_complexity 19 43 0 282 248 118 20 chr10 32953500 32953653 -107363112 - L1 LINE L1 -2208 3938 3771 21 57 0 0 chr10 32953770 32953805 -107362960 + AT_rich Low_complexity Low_complexity 1 35 0 379 296 107 47 chr10 32953894 32954211 -107362554 - L1 LINE L1 -2701 3445 3110 3001 17 0 0 chr10 32957512 32958060 -107358705 + L1P1 LINE L1 5014 5561 -594 324 277 54 9 chr10 32961577 32961689 -107355076 - MIR SINE MIR -113 149 33 227 256 33 56 chr10 32961771 32961811 -107354954 + MIR SINE MIR 105 144 -118 2710 147 9 9 chr10 32961811 32962239 -107354526 - MSTC LTR MaLR 0 428 1 227 256 33 56 chr10 32962239 32962288 -107354477 + MIR SINE MIR 144 192 -70 1231 76 4 44 chr10 32971655 32971880 -107344885 + HERVK9 LTR ERVK 3725 3940 -1976 1873 132 3 12 chr10 32971881 32972207 -107344558 + HERVK9 LTR ERVK 4583 4905 -1011 2508 69 0 3 chr10 32972241 32972544 -107344221 + AluY SINE Alu 1 302 -9 2367 92 0 16 chr10 32972698 32973014 -107343751 + AluSq SINE Alu 1 311 -2 865 130 30 0 chr10 32973018 32973149 -107343616 + AluJo SINE Alu 1 135 -177 22 0 0 0 chr10 32973149 32973171 -107343594 + AT_rich Low_complexity Low_complexity 1 22 0 2786 142 17 4 chr10 32977004 32977482 -107339283 - MER41B LTR ERV1 0 635 152 1695 105 0 13 chr10 32977482 32977721 -107339044 - AluSq SINE Alu -7 306 71 323 182 18 0 chr10 32980662 32980717 -107336048 + AluJ/FLAM SINE Alu 10 65 -237 1654 109 102 82 chr10 32984945 32985248 -107331517 - AluSx SINE Alu -3 309 1 8854 64 9 0 chr10 32987806 32989016 -107327749 - L1P LINE L1 -1145 5001 3781 2180 111 3 0 chr10 32992571 32992868 -107323897 + AluSx SINE Alu 4 301 -11 27 0 0 0 chr10 32994712 32994739 -107322026 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr10 32998531 32998559 -107318206 + AT_rich Low_complexity Low_complexity 1 28 0 278 218 0 13 chr10 32998598 32998676 -107318089 - HAL1 LINE L1 -302 2205 2129 3303 19 0 0 chr10 32998736 32999114 -107317651 - L1PA2 LINE L1 -4 6151 5774 2242 101 3 3 chr10 32999188 32999485 -107317280 - AluSq SINE Alu -16 297 1 333 191 0 0 chr10 32999690 32999737 -107317028 + T-rich Low_complexity Low_complexity 1 47 0 627 330 67 28 chr10 32999837 33000164 -107316601 - L2 LINE L2 -941 2373 2034 2086 119 20 0 chr10 33004321 33004614 -107312151 + AluSx SINE Alu 1 299 -13 208 313 9 120 chr10 33004620 33004837 -107311928 - L2 LINE L2 -2760 554 362 1372 243 181 24 chr10 33007308 33007810 -107308955 - MER20B DNA MER1_type -182 601 21 675 270 35 11 chr10 33007854 33008028 -107308737 + MER45A DNA AcHobo 1 178 0 429 88 44 0 chr10 33013176 33013244 -107303521 - BC200 scRNA scRNA -128 72 2 250 305 80 7 chr10 33013279 33013430 -107303335 - Charlie7 DNA MER1_type -16 2596 2435 1981 160 22 8 chr10 33013881 33014237 -107302528 + L1MB8 LINE L1 5818 6178 0 298 315 151 20 chr10 33016195 33016341 -107300424 + MER5A DNA MER1_type 19 183 -6 711 214 60 45 chr10 33017818 33018019 -107298746 + MER3 DNA MER1_type 6 209 0 396 277 60 42 chr10 33018090 33018256 -107298509 - MIR SINE MIR -92 170 2 197 326 146 0 chr10 33022423 33022512 -107294253 + MIR SINE MIR 29 130 -78 236 526 0 0 chr10 33024006 33024082 -107292683 + T-rich Low_complexity Low_complexity 1 76 0 259 293 123 0 chr10 33024531 33024637 -107292128 - L2 LINE L2 -1 3271 3153 23 0 0 0 chr10 33024881 33024904 -107291861 + AT_rich Low_complexity Low_complexity 1 23 0 2738 66 11 0 chr10 33024913 33025292 -107291473 + L1PA6 LINE L1 5801 6154 0 21 0 0 0 chr10 33032137 33032158 -107284607 + GC_rich Low_complexity Low_complexity 1 21 0 274 263 18 47 chr10 33032344 33032515 -107284250 + G-rich Low_complexity Low_complexity 4 169 0 2288 99 0 3 chr10 33039189 33039491 -107277274 - AluY SINE Alu -10 301 1 2153 130 3 0 chr10 33039499 33039791 -107276974 - AluSg SINE Alu -17 293 1 2325 97 10 0 chr10 33039799 33040097 -107276668 - AluSq SINE Alu -7 306 6 1619 182 27 30 chr10 33040125 33040422 -107276343 - AluJo SINE Alu -15 297 2 189 0 0 0 chr10 33040435 33040456 -107276309 + (TTAAA)n Simple_repeat Simple_repeat 4 24 0 388 328 54 24 chr10 33041225 33041526 -107275239 - LTR33 LTR ERVL -9 512 158 1937 148 7 10 chr10 33041526 33041829 -107274936 + AluJb SINE Alu 6 307 -5 388 328 54 24 chr10 33041829 33041973 -107274792 - LTR33 LTR ERVL -363 158 20 227 280 68 15 chr10 33042022 33042154 -107274611 - L2 LINE L2 -239 3033 2895 2192 106 0 0 chr10 33042355 33042670 -107274095 - AluSx SINE Alu 0 315 1 239 179 75 0 chr10 33042670 33042737 -107274028 + MER97c DNA MER1_type? 225 296 -794 794 203 27 0 chr10 33042745 33042893 -107273872 - FRAM SINE Alu -23 153 2 1208 208 148 48 chr10 33042893 33043354 -107273411 + MER97b DNA MER1_type? 278 784 -269 180 0 0 0 chr10 33043365 33043385 -107273380 + (TG)n Simple_repeat Simple_repeat 1 20 0 2067 134 10 0 chr10 33043472 33043770 -107272995 + AluSx SINE Alu 7 307 -5 280 83 0 0 chr10 33043770 33043806 -107272959 + (GA)n Simple_repeat Simple_repeat 1 36 0 838 107 21 0 chr10 33043810 33043950 -107272815 + (GGAA)n Simple_repeat Simple_repeat 3 145 0 1972 134 7 0 chr10 33043993 33044270 -107272495 + AluSx SINE Alu 1 279 -33 1869 176 97 32 chr10 33044289 33044720 -107272045 + LTR2B LTR ERV1 32 490 0 2602 88 34 26 chr10 33044720 33045104 -107271661 + Harlequin LTR ERV1 1 387 -6509 2390 67 60 0 chr10 33045097 33045428 -107271337 + Harlequin LTR ERV1 263 613 -6283 * 2400 54 6 13 chr10 33045408 33045723 -107271042 + Harlequin LTR ERV1 1408 1720 -5176 254 263 200 0 chr10 33045725 33045805 -107270960 - LTR8 LTR ERV1 -438 253 158 830 76 0 23 chr10 33045811 33045943 -107270822 + Harlequin LTR ERV1 1807 1935 -4961 32298 60 2 18 chr10 33046043 33050154 -107266611 + Harlequin LTR ERV1 1913 5961 -935 640 100 36 45 chr10 33050152 33050262 -107266503 + Harlequin LTR ERV1 6788 6896 0 * 2171 162 89 33 chr10 33050263 33050721 -107266044 + LTR2B LTR ERV1 7 490 0 529 118 0 0 chr10 33050829 33050905 -107265860 + LTR2B LTR ERV1 415 490 0 1806 159 48 0 chr10 33051026 33051321 -107265444 - AluSx SINE Alu -1 311 3 3582 128 2 13 chr10 33051829 33052362 -107264403 + MER1A DNA MER1_type 1 527 0 2152 113 0 0 chr10 33052589 33052871 -107263894 - AluSx SINE Alu -17 295 14 229 26 26 26 chr10 33053106 33053145 -107263620 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 472 135 10 58 chr10 33053165 33053269 -107263496 + AluJb SINE Alu 213 311 -1 2039 124 16 19 chr10 33053482 33053789 -107262976 - AluSq SINE Alu -7 306 1 21 0 0 0 chr10 33054080 33054101 -107262664 + AT_rich Low_complexity Low_complexity 1 21 0 32 26 0 0 chr10 33054311 33054350 -107262415 + AT_rich Low_complexity Low_complexity 1 39 0 759 167 0 8 chr10 33054350 33054470 -107262295 - FLAM_C SINE Alu -13 120 2 208 247 12 12 chr10 33054523 33054604 -107262161 + (TA)n Simple_repeat Simple_repeat 1 81 0 2193 116 31 0 chr10 33054642 33054935 -107261830 + AluSx SINE Alu 1 302 -10 761 209 35 54 chr10 33054940 33055199 -107261566 + MER97c DNA MER1_type? 837 1090 0 2399 101 3 0 chr10 33055395 33055701 -107261064 - AluSp SINE Alu -6 307 1 1968 156 0 0 chr10 33055703 33056061 -107260704 - AluSx SINE Alu 0 312 1 659 183 38 23 chr10 33056061 33056192 -107260573 - AluJo/FLAM SINE Alu -169 133 1 1851 172 10 0 chr10 33057219 33057516 -107259249 + AluJb SINE Alu 1 300 -12 305 261 52 35 chr10 33057855 33057970 -107258795 + L2 LINE L2 2937 3053 -219 806 181 0 0 chr10 33058162 33058289 -107258476 + FLAM_C SINE Alu 1 127 -16 21 36 0 0 chr10 33058435 33058463 -107258302 + AT_rich Low_complexity Low_complexity 1 28 0 730 148 99 77 chr10 33058465 33058647 -107258118 - AluJo SINE Alu -5 307 122 1925 119 7 0 chr10 33059108 33059394 -107257371 + AluSx SINE Alu 14 301 -11 252 77 0 0 chr10 33060579 33060618 -107256147 + (CA)n Simple_repeat Simple_repeat 2 40 0 1082 182 5 14 chr10 33060828 33061042 -107255723 + AluJo SINE Alu 87 298 -14 2039 111 0 19 chr10 33061064 33061371 -107255394 + AluSg SINE Alu 1 301 -9 597 195 55 8 chr10 33062136 33062264 -107254501 - MER94 DNA DNA 0 134 1 222 355 124 0 chr10 33062804 33062925 -107253840 + L2 LINE L2 3137 3272 0 931 184 12 0 chr10 33063288 33063451 -107253314 + FRAM SINE Alu 1 165 -11 1374 121 0 0 chr10 33063465 33063663 -107253102 + AluSg SINE Alu 1 198 -112 614 136 0 0 chr10 33063663 33063751 -107253014 - AluS SINE Alu -224 89 2 1906 100 50 4 chr10 33064329 33064609 -107252156 - AluSg SINE Alu -17 293 1 1125 153 1 28 chr10 33065145 33065454 -107251311 + MLT1A1 LTR MaLR 1 365 0 2108 116 3 0 chr10 33065730 33066031 -107250734 + AluSx SINE Alu 1 302 -10 202 374 18 25 chr10 33066509 33066672 -107250093 - MIR3 SINE MIR -7 201 40 794 188 0 0 chr10 33066696 33066829 -107249936 - FLAM_C SINE Alu 0 133 1 234 309 222 8 chr10 33067238 33067364 -107249401 + MIR SINE MIR 2 154 -108 2425 92 0 0 chr10 33067372 33067697 -107249068 + L1PB2 LINE L1 5542 5866 -285 264 91 0 0 chr10 33067697 33067759 -107249006 - Alu SINE Alu 0 314 253 234 0 0 0 chr10 33067821 33067847 -107248918 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 655 188 7 29 chr10 33068048 33068366 -107248399 + GA-rich Low_complexity Low_complexity 1 310 0 598 134 6 52 chr10 33068371 33068543 -107248222 + (GGAA)n Simple_repeat Simple_repeat 1 164 0 319 260 19 29 chr10 33068778 33068882 -107247883 - MER112 DNA MER1_type -6 254 152 385 212 71 18 chr10 33068892 33069005 -107247760 + MER91C DNA MER1_type 1 119 -21 235 167 20 187 chr10 33069028 33069178 -107247587 - MER112 DNA MER1_type -134 126 2 341 266 11 11 chr10 33069600 33069694 -107247071 + LTR67 LTR ERVL 457 550 -7 773 131 8 8 chr10 33069971 33070093 -107246672 - AluJ SINE Alu -9 303 182 * 804 165 15 0 chr10 33070091 33070224 -107246541 - AluJ SINE Alu -177 135 1 189 243 100 29 chr10 33071421 33071491 -107245274 + L2 LINE L2 2199 2273 -1041 694 244 42 67 chr10 33071510 33071609 -107245156 - L1PB4 LINE L1 0 6156 6056 2362 72 0 0 chr10 33071609 33071902 -107244863 - AluSg SINE Alu -17 293 1 694 244 42 67 chr10 33071902 33072040 -107244725 - L1PB4 LINE L1 -100 6056 5925 303 271 97 85 chr10 33072216 33072463 -107244302 + L2 LINE L2 2641 2890 -424 721 243 49 52 chr10 33072531 33072819 -107243946 - HAL1 LINE L1 -36 2471 2185 1918 135 0 22 chr10 33072861 33073179 -107243586 + AluJo SINE Alu 1 311 -1 297 252 126 0 chr10 33073190 33073293 -107243472 - HAL1 LINE L1 -321 2186 2071 664 144 0 0 chr10 33073314 33073411 -107243354 + FLAM_A SINE Alu 30 126 -16 2180 110 0 0 chr10 33073413 33073705 -107243060 + AluSx SINE Alu 1 292 -20 232 348 54 0 chr10 33074187 33074299 -107242466 + MIR SINE MIR 128 245 -17 841 254 82 5 chr10 33074329 33074549 -107242216 + MIR SINE MIR 23 259 -3 1534 174 54 3 chr10 33074549 33074843 -107241922 + AluJb SINE Alu 2 310 -2 207 0 0 0 chr10 33075259 33075282 -107241483 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1972 103 59 0 chr10 33075734 33076024 -107240741 - AluSx SINE Alu -5 307 1 1727 157 7 3 chr10 33076040 33076357 -107240408 - AluJo SINE Alu 0 318 1 1075 114 0 40 chr10 33076508 33076683 -107240082 + AluSg/x SINE Alu 135 302 -8 2152 118 0 0 chr10 33077183 33077489 -107239276 - AluSx SINE Alu -6 306 1 286 284 0 0 chr10 33078083 33078150 -107238615 + MIR SINE MIR 36 102 -160 1934 121 9 35 chr10 33078257 33078572 -107238193 + AluSx SINE Alu 3 309 -3 530 244 28 50 chr10 33078579 33078759 -107238006 + L1MC5 LINE L1 7733 7908 -53 212 167 0 0 chr10 33078871 33078913 -107237852 + T-rich Low_complexity Low_complexity 1 42 0 287 353 0 8 chr10 33079498 33079631 -107237134 - MER117 DNA MER1_type -65 132 1 215 227 52 103 chr10 33079643 33079740 -107237025 - MIR SINE MIR -122 140 49 722 222 0 0 chr10 33079997 33080123 -107236642 - FLAM_C SINE Alu -16 127 2 2068 144 0 3 chr10 33080158 33080471 -107236294 - AluSx SINE Alu 0 312 1 180 176 0 0 chr10 33080532 33080566 -107236199 + CT-rich Low_complexity Low_complexity 2 35 0 1785 139 43 0 chr10 33080583 33080864 -107235901 + AluJb SINE Alu 1 293 -19 341 231 144 70 chr10 33081007 33081236 -107235529 + L2 LINE L2 2917 3162 -110 2160 86 0 0 chr10 33081256 33081534 -107235231 + AluSx SINE Alu 22 299 -13 881 203 27 0 chr10 33081600 33081748 -107235017 - AluJo/FRAM SINE Alu -14 288 137 1387 118 0 45 chr10 33081748 33081969 -107234796 - AluSq SINE Alu -102 211 1 829 168 0 0 chr10 33081983 33082108 -107234657 - FLAM_C SINE Alu -8 125 1 575 304 64 48 chr10 33082144 33082331 -107234434 - L1M4 LINE L1 -1672 4474 4279 1923 135 20 0 chr10 33082331 33082627 -107234138 + AluJb SINE Alu 1 302 -10 575 304 64 48 chr10 33082627 33082751 -107234014 - L1M4 LINE L1 -1867 4279 4158 25 31 0 0 chr10 33082757 33082789 -107233976 + AT_rich Low_complexity Low_complexity 1 32 0 1501 161 4 8 chr10 33082796 33083056 -107233709 - AluJb SINE Alu -49 263 5 251 352 48 14 chr10 33083063 33083208 -107233557 - L1M4 LINE L1 -1963 4183 4034 562 299 112 20 chr10 33083539 33083843 -107232922 + ERVL LTR ERVL 1051 1382 -3614 287 307 111 26 chr10 33083963 33084116 -107232649 + ERVL LTR ERVL 1585 1750 -3246 22 0 0 0 chr10 33084124 33084146 -107232619 + AT_rich Low_complexity Low_complexity 1 22 0 685 191 0 0 chr10 33084146 33084261 -107232504 - FLAM_A SINE Alu -18 115 1 294 328 96 28 chr10 33084270 33084447 -107232318 + ERVL LTR ERVL 1769 1957 -3697 352 307 41 66 chr10 33084521 33084606 -107232159 + ERVL LTR ERVL 3895 3981 -1673 2069 116 3 7 chr10 33084606 33084908 -107231857 - AluSx SINE Alu -11 301 1 352 307 41 66 chr10 33084908 33085086 -107231679 + ERVL LTR ERVL 3981 4161 -1493 606 316 18 0 chr10 33085098 33085269 -107231496 + ERVL LTR ERVL 2096 2269 -3495 688 329 17 8 chr10 33085298 33085535 -107231230 + ERVL LTR ERVL 2345 2583 -3181 255 355 0 7 chr10 33086102 33086254 -107230511 + (CCA)n Simple_repeat Simple_repeat 2 152 0 1888 158 0 3 chr10 33086366 33086664 -107230101 - AluSx SINE Alu -15 297 1 1349 196 4 8 chr10 33087339 33087604 -107229161 + L1MB3 LINE L1 4700 4963 -1183 3115 132 327 32 chr10 33087606 33088324 -107228441 - MER21A LTR ERV1 -1 930 1 367 157 56 74 chr10 33088324 33088369 -107228396 + L1MB3 LINE L1 4960 5004 -1142 2040 121 0 7 chr10 33088369 33088674 -107228091 + AluSq SINE Alu 1 303 -10 367 157 56 74 chr10 33088674 33088736 -107228029 + L1MB3 LINE L1 5004 5065 -1081 4747 143 13 36 chr10 33088753 33089219 -107227546 + L1MB3 LINE L1 5304 5742 -441 2026 126 0 16 chr10 33089219 33089393 -107227372 - AluSg SINE Alu -5 305 137 2066 82 7 7 chr10 33089393 33089686 -107227079 - AluY SINE Alu -18 293 1 2026 126 0 16 chr10 33089686 33089821 -107226944 - AluSg SINE Alu -173 137 1 4747 143 13 36 chr10 33089821 33090205 -107226560 + L1MB3 LINE L1 5742 6134 -49 650 140 0 0 chr10 33090205 33090298 -107226467 - FRAM SINE Alu -28 148 56 6163 107 164 16 chr10 33090437 33091501 -107225264 + MER11B LTR ERVK 1 1222 -14 2138 112 0 0 chr10 33091506 33091802 -107224963 - AluSx SINE Alu -16 296 1 535 139 0 0 chr10 33091983 33092062 -107224703 - AluSx SINE Alu -12 297 219 1195 85 0 0 chr10 33092079 33092232 -107224533 - AluSx SINE Alu -159 153 1 2038 106 0 3 chr10 33092288 33092616 -107224149 + AluSc SINE Alu 1 327 0 494 222 24 16 chr10 33092936 33093062 -107223703 + AluSq/x SINE Alu 19 145 -168 598 202 0 8 chr10 33093064 33093188 -107223577 + AluY SINE Alu 189 311 0 1009 141 0 33 chr10 33093188 33093372 -107223393 + AluSg/x SINE Alu 119 296 -14 208 143 0 0 chr10 33093580 33093615 -107223150 + (T)n Simple_repeat Simple_repeat 1 35 0 303 323 133 31 chr10 33093813 33094008 -107222757 - MIR SINE MIR 0 262 48 2101 105 0 3 chr10 33094345 33094640 -107222125 + AluSx SINE Alu 1 294 -18 256 230 95 40 chr10 33094767 33094841 -107221924 + MER45C DNA AcHobo 1 78 -875 850 207 21 21 chr10 33094909 33095102 -107221663 - AluJb SINE Alu -3 309 117 328 274 177 18 chr10 33095102 33095215 -107221550 + MER45C DNA AcHobo 141 271 -682 2063 134 0 0 chr10 33095299 33095620 -107221145 + AluSx SINE Alu 1 312 0 427 212 121 10 chr10 33095717 33095816 -107220949 + L2 LINE L2 3204 3313 0 2179 125 0 0 chr10 33095997 33096300 -107220465 - AluSx SINE Alu -9 303 1 2339 97 3 0 chr10 33096301 33096621 -107220144 - L1PA13 LINE L1 -467 5696 5376 3553 73 11 0 chr10 33096621 33097078 -107219687 + L1PA13 LINE L1 5692 6163 0 255 305 35 64 chr10 33097756 33097897 -107218868 + L3b LINE CR1 1230 1366 -217 26 0 0 0 chr10 33097908 33097934 -107218831 + AT_rich Low_complexity Low_complexity 1 26 0 1224 176 38 109 chr10 33097949 33098262 -107218503 - AluJo SINE Alu -21 291 1 224 312 43 11 chr10 33098364 33098457 -107218308 - L2 LINE L2 -4 3309 3214 236 277 67 25 chr10 33098577 33098696 -107218069 + L1MEd LINE L1 3 126 -5993 207 0 0 0 chr10 33099025 33099048 -107217717 + (CA)n Simple_repeat Simple_repeat 2 24 0 1341 128 5 0 chr10 33099118 33099321 -107217444 + AluSq SINE Alu 103 306 -7 312 254 89 83 chr10 33099435 33099604 -107217161 + L1MEd LINE L1 523 692 -5427 2134 104 0 3 chr10 33099604 33099901 -107216864 + AluSc SINE Alu 1 296 -13 386 245 96 59 chr10 33099924 33100246 -107216519 + L1MEd LINE L1 873 1206 -4913 1605 175 28 0 chr10 33100248 33100534 -107216231 + AluJb SINE Alu 1 294 -18 1346 157 0 0 chr10 33100534 33100750 -107216015 + AluSp SINE Alu 2 217 -96 2037 112 7 3 chr10 33100823 33101119 -107215646 + AluSq SINE Alu 1 297 -16 260 305 8 39 chr10 33101137 33101265 -107215500 + HAL1 LINE L1 1449 1572 -935 2107 89 0 26 chr10 33101497 33101799 -107214966 - AluSq SINE Alu -19 294 1 2140 112 0 0 chr10 33101800 33102094 -107214671 - AluSx SINE Alu -18 294 1 372 225 25 0 chr10 33103074 33103154 -107213611 - MER5B DNA MER1_type -73 105 24 655 192 0 32 chr10 33103161 33103286 -107213479 + MER77 LTR ERV1 1 121 -484 2031 112 3 0 chr10 33103289 33103584 -107213181 - AluSx SINE Alu -16 296 1 21 0 0 0 chr10 33103681 33103702 -107213063 + AT_rich Low_complexity Low_complexity 1 21 0 1971 136 0 3 chr10 33104570 33104871 -107211894 - AluSx SINE Alu -12 300 1 763 193 0 36 chr10 33104957 33105123 -107211642 - AluJb SINE Alu -9 303 144 1564 118 169 0 chr10 33105595 33105850 -107210915 + AluSx SINE Alu 1 298 -4 1904 138 0 13 chr10 33105993 33106297 -107210468 - AluSx SINE Alu -12 300 1 284 355 28 57 chr10 33106365 33106647 -107210118 + L2 LINE L2 2596 2869 -445 227 339 119 9 chr10 33106708 33106817 -107209948 + L2 LINE L2 2948 3068 -204 1831 53 4 4 chr10 33107134 33107362 -107209403 - AluSg/x SINE Alu -13 299 72 1894 132 7 7 chr10 33107412 33107707 -107209058 - AluJb SINE Alu -16 296 2 208 328 0 0 chr10 33107792 33107859 -107208906 - L3 LINE CR1 -889 688 622 * 233 362 102 39 chr10 33107850 33108231 -107208534 + L3 LINE CR1 880 1284 -293 2413 77 3 3 chr10 33108766 33109065 -107207700 + AluSx SINE Alu 1 299 -13 23 33 0 0 chr10 33109549 33109579 -107207186 + AT_rich Low_complexity Low_complexity 1 30 0 202 283 0 0 chr10 33109834 33109880 -107206885 - L2 LINE L2 -17 3255 3210 820 164 0 0 chr10 33110006 33110134 -107206631 + FLAM_C SINE Alu 1 128 -5 2196 116 0 3 chr10 33110142 33110435 -107206330 + AluSx SINE Alu 1 292 -20 991 152 13 118 chr10 33111416 33111653 -107205112 + AluJo SINE Alu 85 296 -16 688 122 2 4 chr10 33113249 33113382 -107203383 - L1MB1 LINE L1 -1 6167 6051 629 154 0 132 chr10 33113790 33113886 -107202879 - FLAM_C SINE Alu -190 122 48 2291 91 0 0 chr10 33113886 33114171 -107202594 + AluSg SINE Alu 10 294 -16 629 154 0 132 chr10 33114171 33114210 -107202555 - FLAM_C SINE Alu -264 48 5 973 172 197 5 chr10 33114776 33114979 -107201786 - AluSq SINE Alu -71 242 1 1862 173 0 10 chr10 33115866 33116172 -107200593 + AluJo SINE Alu 1 303 -9 2319 106 0 0 chr10 33116915 33117216 -107199549 - AluSx SINE Alu -11 301 1 1651 173 0 22 chr10 33119129 33119407 -107197358 + AluJb SINE Alu 21 292 -20 377 277 7 36 chr10 33119696 33119833 -107196932 - MIR SINE MIR -109 153 21 602 143 76 0 chr10 33119912 33120017 -107196748 + MER69A DNA AcHobo 1 113 -64 1009 176 98 25 chr10 33120017 33120163 -107196602 - L1PB3 LINE L1 -7 6147 5980 2232 112 0 20 chr10 33120163 33120468 -107196297 - AluSx SINE Alu -13 299 1 1009 176 98 25 chr10 33120468 33120525 -107196240 - L1PB3 LINE L1 -174 5980 5929 1735 105 0 0 chr10 33120685 33120913 -107195852 - AluSg/x SINE Alu 0 310 83 1282 178 23 0 chr10 33121259 33121478 -107195287 + AluJo SINE Alu 86 309 -3 2185 103 0 13 chr10 33122456 33122757 -107194008 + AluSq SINE Alu 2 298 -15 3185 166 23 27 chr10 33122870 33123527 -107193238 - L1 LINE L1 -1280 4866 4213 1795 161 13 13 chr10 33124513 33124818 -107191947 + AluJo SINE Alu 1 305 -7 1819 110 100 4 chr10 33125460 33125741 -107191024 - AluSq SINE Alu -5 308 1 2314 113 0 0 chr10 33125821 33126122 -107190643 - AluSx SINE Alu -11 301 1 1647 168 20 37 chr10 33126125 33126312 -107190453 - AluJo SINE Alu -20 292 110 2269 121 0 0 chr10 33126312 33126609 -107190156 + AluSg SINE Alu 1 297 -13 1647 168 20 37 chr10 33126609 33126718 -107190047 - AluJo SINE Alu -202 110 1 187 273 18 0 chr10 33126840 33126895 -107189870 + MIR3 SINE MIR 125 180 -28 2392 91 3 0 chr10 33127284 33127591 -107189174 + AluSg SINE Alu 1 308 -2 2027 129 0 0 chr10 33127746 33128018 -107188747 + AluSx SINE Alu 1 272 -40 1419 197 41 55 chr10 33128119 33128485 -107188280 + MLT1B LTR MaLR 30 390 0 456 313 33 62 chr10 33128555 33128923 -107187842 + MLT1K LTR MaLR 226 582 -6 2265 74 0 21 chr10 33130010 33130293 -107186472 - AluSg SINE Alu -24 286 10 624 167 0 0 chr10 33130293 33130389 -107186376 + FLAM_C SINE Alu 27 122 -21 2256 120 0 7 chr10 33136211 33136519 -107180246 - AluSx SINE Alu -6 306 1 1707 85 162 4 chr10 33136719 33136978 -107179787 + AluSg SINE Alu 1 300 0 436 266 5 43 chr10 33136988 33137172 -107179593 + AluSg/x SINE Alu 121 297 -15 1437 153 9 123 chr10 33138014 33138354 -107178411 + AluJo SINE Alu 2 302 0 2298 105 3 3 chr10 33138528 33138834 -107177931 - AluSx SINE Alu -6 306 1 260 86 0 0 chr10 33139247 33139282 -107177483 - U2 snRNA snRNA -153 35 1 487 170 75 21 chr10 33139359 33139453 -107177312 + MER50 LTR ERV1 1 99 -635 973 122 0 7 chr10 33139453 33139621 -107177144 - AluSg/x SINE Alu 0 303 137 2279 85 3 31 chr10 33139621 33139939 -107176826 - AluSp SINE Alu -4 309 1 3769 131 45 3 chr10 33139941 33140536 -107176229 + MER50 LTR ERV1 92 711 -23 284 218 0 0 chr10 33140602 33140657 -107176108 - L1MC5 LINE L1 -90 7871 7817 514 263 56 33 chr10 33140665 33140878 -107175887 - L1ME3A LINE L1 -5 6165 5948 51 42 0 0 chr10 33140982 33141054 -107175711 + AT_rich Low_complexity Low_complexity 1 72 0 1436 145 0 9 chr10 33141061 33141282 -107175483 + AluJo SINE Alu 71 289 -23 183 42 0 0 chr10 33141452 33141476 -107175289 + (T)n Simple_repeat Simple_repeat 1 24 0 226 258 0 0 chr10 33141806 33141868 -107174897 + L2 LINE L2 2990 3051 -221 2183 112 0 0 chr10 33141973 33142259 -107174506 - AluSx SINE Alu -26 286 1 203 333 0 0 chr10 33142314 33142383 -107174382 + L2 LINE L2 3242 3310 -3 2167 125 3 28 chr10 33142469 33142789 -107173976 - AluSx SINE Alu 0 312 1 24 32 0 0 chr10 33142984 33143015 -107173750 + AT_rich Low_complexity Low_complexity 1 31 0 2085 131 20 0 chr10 33143103 33143463 -107173302 + AluSx SINE Alu 1 312 0 345 240 162 48 chr10 33143849 33144039 -107172726 - MLT1H LTR MaLR 0 549 345 1374 148 8 30 chr10 33144043 33144108 -107172657 + AluSg/x SINE Alu 72 137 -175 2139 116 3 0 chr10 33144108 33144418 -107172347 + AluSq SINE Alu 2 312 0 1374 148 8 30 chr10 33144418 33144588 -107172177 + AluSg/x SINE Alu 137 303 -9 235 182 0 0 chr10 33144588 33144632 -107172133 + L1MC3 LINE L1 7144 7187 -598 1770 188 22 6 chr10 33144697 33145021 -107171744 + L1MC3 LINE L1 7187 7515 -270 568 126 42 11 chr10 33145024 33145119 -107171646 + AluJ/FLAM SINE Alu 2 99 -213 1412 178 119 7 chr10 33145186 33145455 -107171310 + AluJo SINE Alu 1 299 -13 973 174 6 0 chr10 33145456 33145623 -107171142 + L1MC3 LINE L1 7510 7677 -108 1867 149 7 3 chr10 33145872 33146154 -107170611 - AluJb SINE Alu -29 283 1 937 127 35 12 chr10 33146304 33146477 -107170288 - Charlie3 DNA MER1_type -18 2692 2516 209 213 49 0 chr10 33146529 33146590 -107170175 + (TA)n Simple_repeat Simple_repeat 1 64 0 2592 128 50 26 chr10 33146599 33146716 -107170049 - MER1A DNA MER1_type -2269 433 320 2902 149 68 52 chr10 33146716 33147189 -107169576 + LTR9 LTR ERV1 1 488 -124 2343 108 0 0 chr10 33147189 33147495 -107169270 - AluSx SINE Alu -6 306 1 2902 149 68 52 chr10 33147495 33147623 -107169142 + LTR9 LTR ERV1 488 612 0 2592 128 50 26 chr10 33147623 33147928 -107168837 - MER1A DNA MER1_type -2382 320 1 1312 158 83 142 chr10 33148042 33148536 -107168229 + MER4C LTR ERV1 1 465 0 24 0 0 0 chr10 33149408 33149432 -107167333 + AT_rich Low_complexity Low_complexity 1 24 0 195 42 0 0 chr10 33149441 33149465 -107167300 + (TTA)n Simple_repeat Simple_repeat 1 24 0 826 138 0 46 chr10 33149465 33149595 -107167170 - FLAM_C SINE Alu -19 124 1 2085 130 3 0 chr10 33149599 33149891 -107166874 - AluSq SINE Alu -20 293 1 226 229 48 57 chr10 33149992 33150097 -107166668 - HAL1b LINE L1 -12 1336 1233 1917 163 0 13 chr10 33150177 33150483 -107166282 - 7SLRNA srpRNA srpRNA -14 306 5 346 176 0 0 chr10 33150483 33150534 -107166231 - FRAM/FAM SINE Alu -117 49 1 2199 117 10 0 chr10 33151054 33151344 -107165421 - AluSx SINE Alu -19 293 1 758 181 0 0 chr10 33151502 33151629 -107165136 + FLAM_A SINE Alu 1 127 -6 367 285 8 16 chr10 33151734 33151880 -107164885 + FRAM SINE Alu 25 153 -13 2136 106 51 0 chr10 33152052 33152344 -107164421 - AluSx SINE Alu -5 307 1 213 141 16 47 chr10 33152395 33152459 -107164306 + CT-rich Low_complexity Low_complexity 4 65 0 1505 239 42 13 chr10 33152469 33152921 -107163844 - L1MC5 LINE L1 -493 7468 7004 2153 106 7 3 chr10 33153219 33153511 -107163254 - AluSc SINE Alu -16 293 1 234 286 54 18 chr10 33153512 33153624 -107163141 - MIR SINE MIR -115 147 32 284 314 0 20 chr10 33153769 33153871 -107162894 + L2 LINE L2 2595 2694 -620 2156 309 67 77 chr10 33153923 33156479 -107160286 + HERVI LTR ERV1 5128 7656 -129 4199 197 51 18 chr10 33157452 33158275 -107158490 - L1MB8 LINE L1 -5 6173 5379 1663 167 4 18 chr10 33158275 33158550 -107158215 - AluJb SINE Alu -12 300 30 4199 197 51 18 chr10 33158550 33158901 -107157864 - L1MB8 LINE L1 -799 5379 5041 1720 167 3 39 chr10 33158901 33159071 -107157694 - AluJb SINE Alu -16 296 140 2329 122 0 0 chr10 33159071 33159383 -107157382 - AluSx SINE Alu 0 312 1 1063 127 6 12 chr10 33159383 33159517 -107157248 - AluJo SINE Alu -177 135 3 1720 167 3 39 chr10 33159383 33159517 -107157248 - AluJb SINE Alu -172 140 3 4199 197 51 18 chr10 33159517 33160038 -107156727 - L1MB8 LINE L1 -1137 5041 4425 924 154 0 0 chr10 33160038 33160181 -107156584 - FRAM SINE Alu -6 170 28 1676 178 3 3 chr10 33160217 33160509 -107156256 + AluJb SINE Alu 1 292 -20 23 33 0 0 chr10 33160509 33160539 -107156226 + AT_rich Low_complexity Low_complexity 1 30 0 2122 123 0 0 chr10 33160592 33160901 -107155864 - AluSx SINE Alu -3 309 1 1676 208 46 3 chr10 33160902 33161253 -107155512 - L1MC1 LINE L1 -9 6324 5959 4245 240 14 6 chr10 33161269 33162325 -107154440 - L1MC1 LINE L1 -1011 5135 4071 272 258 22 11 chr10 33162323 33162412 -107154353 - L1MB8 LINE L1 -1762 4384 4295 * 396 307 39 39 chr10 33162431 33162610 -107154155 - L1ME4a LINE L1 -284 5837 5659 1882 146 3 13 chr10 33162661 33162976 -107153789 - AluSx SINE Alu 0 312 1 1937 156 32 51 chr10 33163194 33163252 -107153513 + MLT1A1 LTR MaLR 1 59 -306 2213 99 0 0 chr10 33163252 33163545 -107153220 + AluSc SINE Alu 1 293 -16 1937 156 32 51 chr10 33163545 33163858 -107152907 + MLT1A1 LTR MaLR 59 365 0 1173 118 72 5 chr10 33164141 33164336 -107152429 + MER83C LTR ERV1 2 209 -164 272 205 36 12 chr10 33164458 33164541 -107152224 - MER53 DNA DNA -82 107 23 * 314 195 37 0 chr10 33164471 33164553 -107152212 + MER53 DNA DNA 105 189 0 326 212 50 40 chr10 33164895 33164994 -107151771 - MIR3 SINE MIR -15 193 94 912 177 23 23 chr10 33165050 33165225 -107151540 + LTR9 LTR ERV1 438 612 0 1289 72 0 6 chr10 33165236 33165402 -107151363 + MER41-int LTR ERV1 4838 5002 -944 609 178 10 0 chr10 33165404 33165505 -107151260 + MSTD LTR MaLR 246 347 -49 602 203 45 38 chr10 33165915 33166048 -107150717 - MER20 DNA MER1_type -36 183 50 710 128 4 0 chr10 33166048 33166165 -107150600 + L1PB4 LINE L1 5685 5789 -367 25 65 0 0 chr10 33166171 33166217 -107150548 + AT_rich Low_complexity Low_complexity 1 46 0 278 126 50 44 chr10 33166224 33166383 -107150382 + (TATAA)n Simple_repeat Simple_repeat 5 164 0 30 69 0 20 chr10 33166390 33166454 -107150311 + AT_rich Low_complexity Low_complexity 1 65 -34 2302 146 13 5 chr10 33166454 33166831 -107149934 + L1PB4 LINE L1 5776 6155 -1 1769 157 0 10 chr10 33166839 33167132 -107149633 + AluSx SINE Alu 1 290 -22 30 69 0 20 chr10 33167132 33167159 -107149606 + AT_rich Low_complexity Low_complexity 72 99 0 648 157 0 0 chr10 33167166 33167268 -107149497 + FRAM SINE Alu 1 101 -75 21 0 0 0 chr10 33167275 33167296 -107149469 + AT_rich Low_complexity Low_complexity 1 21 0 1865 139 41 0 chr10 33168425 33168720 -107148045 + AluSg SINE Alu 1 307 -3 22 0 0 0 chr10 33168731 33168753 -107148012 + AT_rich Low_complexity Low_complexity 1 22 0 1176 141 77 56 chr10 33169153 33169352 -107147413 - L1PB4 LINE L1 -1 6155 5949 1584 163 71 0 chr10 33169352 33169634 -107147131 - AluJb SINE Alu -10 302 1 1176 141 77 56 chr10 33169634 33169668 -107147097 - L1PB4 LINE L1 -207 5949 5917 843 207 224 46 chr10 33169965 33170238 -107146527 + L1MC4 LINE L1 6888 7238 -804 2265 78 3 3 chr10 33170238 33170534 -107146231 + AluSc SINE Alu 1 296 -13 843 207 224 46 chr10 33170534 33170608 -107146157 + L1MC4 LINE L1 7238 7297 -745 729 229 6 22 chr10 33170608 33170791 -107145974 - AluJb SINE Alu -3 309 130 339 207 100 93 chr10 33171139 33171279 -107145486 - MIR SINE MIR -76 186 46 202 266 0 31 chr10 33172472 33172536 -107144229 + (CATA)n Simple_repeat Simple_repeat 2 63 0 1072 140 0 0 chr10 33172755 33172919 -107143846 + FRAM SINE Alu 1 164 -12 233 281 0 16 chr10 33173282 33173346 -107143419 + L2 LINE L2 3206 3268 -4 1014 151 6 0 chr10 33173516 33173682 -107143083 - FRAM SINE Alu -9 167 1 260 216 20 0 chr10 33173697 33173748 -107143017 - MERVL LTR ERVL -2713 2772 2721 * 689 264 110 35 chr10 33173746 33173973 -107142792 - MERVL LTR ERVL -3445 2319 2076 3028 88 20 5 chr10 33173980 33174378 -107142387 + MLT2A1 LTR ERVL 1 404 -40 288 186 0 0 chr10 33174388 33174447 -107142318 + (CA)n Simple_repeat Simple_repeat 2 60 0 427 55 0 0 chr10 33174451 33174506 -107142259 + MLT2A1 LTR ERVL 399 453 0 986 307 26 48 chr10 33174568 33175103 -107141662 - MERVL LTR ERVL -3052 1977 1458 273 289 13 0 chr10 33175438 33175514 -107141251 - MER116 DNA Mariner 0 80 4 900 130 0 15 chr10 33175649 33175780 -107140985 + FLAM_C SINE Alu 5 133 0 2149 113 0 10 chr10 33176295 33176597 -107140168 + AluSx SINE Alu 1 299 -13 262 292 35 44 chr10 33176848 33176961 -107139804 + L2 LINE L2 2866 2977 -295 383 277 22 51 chr10 33177056 33177193 -107139572 + MIR SINE MIR 93 225 -37 359 248 152 29 chr10 33177218 33177323 -107139442 - MIR3 SINE MIR -15 193 76 182 331 86 65 chr10 33177517 33177656 -107139109 + L2 LINE L2 3111 3252 -20 2399 67 0 3 chr10 33178358 33178658 -107138107 + AluSp SINE Alu 3 301 -12 584 284 22 11 chr10 33178739 33178922 -107137843 + MIR SINE MIR 8 192 -70 1292 172 13 0 chr10 33178930 33179157 -107137608 - MER83C LTR ERV1 0 373 144 849 169 14 0 chr10 33179257 33179405 -107137360 - AluJb SINE Alu -10 302 153 189 367 0 0 chr10 33179592 33179652 -107137113 - L2 LINE L2 -54 3259 3200 1926 76 0 4 chr10 33179691 33179986 -107136779 + AluSq SINE Alu 35 328 0 386 315 112 0 chr10 33180963 33181106 -107135659 + MIR SINE MIR 60 218 -44 1775 150 10 19 chr10 33181241 33181548 -107135217 - AluJo SINE Alu -8 304 1 416 265 38 30 chr10 33182116 33182248 -107134517 - MIR SINE MIR -113 149 17 430 282 34 34 chr10 33182409 33182558 -107134207 - MIR SINE MIR -79 183 35 1885 139 4 0 chr10 33183191 33183510 -107133255 - AluSx SINE Alu 0 320 1 2250 223 42 8 chr10 33184047 33184545 -107132220 + LTR40a LTR ERVL 4 518 -1 2006 125 0 0 chr10 33184993 33185297 -107131468 - AluSg SINE Alu 0 304 1 513 209 22 50 chr10 33185301 33185440 -107131325 + Charlie1b DNA MER1_type 86 220 -303 467 264 167 14 chr10 33185744 33185888 -107130877 + MIR SINE MIR 20 185 -77 595 262 116 43 chr10 33185988 33186290 -107130475 - L3 LINE CR1 -84 1493 1170 2113 108 0 0 chr10 33187427 33187724 -107129041 - AluSx SINE Alu -15 297 1 369 43 0 0 chr10 33188195 33188242 -107128523 + (TC)n Simple_repeat Simple_repeat 2 48 0 1801 103 48 15 chr10 33188244 33188545 -107128220 - AluSx SINE Alu 0 310 1 328 352 74 22 chr10 33188549 33188779 -107127986 - L1ME4a LINE L1 0 6121 5880 851 210 0 22 chr10 33188873 33189054 -107127711 + FRAM SINE Alu 1 176 0 2442 77 0 0 chr10 33189059 33189370 -107127395 + AluY SINE Alu 1 311 0 1707 127 10 41 chr10 33189456 33189748 -107127017 + AluSx SINE Alu 5 287 -25 637 195 26 77 chr10 33189862 33190057 -107126708 + L1MC5 LINE L1 6730 6914 -1047 2099 113 0 7 chr10 33190066 33190366 -107126399 + AluSx SINE Alu 1 298 -14 462 202 135 0 chr10 33190406 33190510 -107126255 + MIR SINE MIR 144 261 -1 1063 45 0 8 chr10 33190894 33191026 -107125739 + AluSq/x SINE Alu 1 131 -181 830 166 0 7 chr10 33191960 33192099 -107124666 + FLAM_C SINE Alu 5 142 -1 373 354 0 0 chr10 33192126 33192253 -107124512 - MER20B DNA MER1_type -528 255 129 399 324 46 29 chr10 33192353 33192594 -107124171 - MIR SINE MIR -8 254 10 192 385 10 29 chr10 33192694 33192798 -107123967 + L3b LINE CR1 1479 1580 -3 6473 91 37 1 chr10 33193554 33194503 -107122262 + L1PA11 LINE L1 5191 6172 -2 22 0 0 0 chr10 33195172 33195194 -107121571 + AT_rich Low_complexity Low_complexity 1 22 0 1737 157 3 28 chr10 33195489 33195808 -107120957 - AluJb SINE Alu -1 311 1 255 282 45 90 chr10 33196147 33196234 -107120531 - MIR3 SINE MIR -42 166 88 2846 111 46 14 chr10 33196234 33196666 -107120099 + MER83 LTR ERV1 3 448 0 255 282 45 90 chr10 33196666 33196734 -107120031 - MIR3 SINE MIR -120 88 18 1791 291 98 20 chr10 33197080 33197312 -107119453 + L2 LINE L2 1892 2105 -1209 1209 165 102 133 chr10 33197312 33197792 -107118973 + MER4C LTR ERV1 1 465 0 1791 291 98 20 chr10 33197792 33198390 -107118375 + L2 LINE L2 2105 2786 -528 488 284 63 79 chr10 33198719 33198973 -107117792 + L2 LINE L2 3061 3310 -3 2153 121 0 0 chr10 33198988 33199293 -107117472 - AluSx SINE Alu -7 305 1 1391 259 74 22 chr10 33199492 33199951 -107116814 + MLT1F LTR MaLR 60 542 0 283 277 42 42 chr10 33199962 33200081 -107116684 - MIR SINE MIR -105 157 39 184 376 8 32 chr10 33202355 33202480 -107114285 - MIR3 SINE MIR -21 187 66 294 360 109 16 chr10 33202856 33203178 -107113587 + L2 LINE L2 2013 2364 -950 254 250 160 30 chr10 33203162 33203262 -107113503 + L2 LINE L2 3154 3266 -6 * 2411 158 44 17 chr10 33203377 33203853 -107112912 + L1PB3 LINE L1 5660 6148 -6 991 196 105 49 chr10 33203991 33204277 -107112488 - AluJo SINE Alu 0 302 1 1230 88 35 0 chr10 33204277 33204447 -107112318 - LTR39 LTR ERV1 -607 176 1 1992 117 7 0 chr10 33204825 33205123 -107111642 + AluSg SINE Alu 11 310 0 1946 104 0 77 chr10 33205393 33205729 -107111036 - AluSx SINE Alu 0 312 3 1069 201 87 84 chr10 33206052 33206070 -107110695 + LTR37B LTR ERV1 3 19 -449 1552 133 65 34 chr10 33206070 33206364 -107110401 + AluJo SINE Alu 3 305 -7 1069 201 87 84 chr10 33206364 33206807 -107109958 + LTR37B LTR ERV1 19 465 -3 1599 169 7 33 chr10 33206970 33207277 -107109488 - AluJo SINE Alu -13 299 1 2387 120 31 11 chr10 33207452 33207809 -107108956 - THE1B LTR MaLR 0 364 1 311 304 54 18 chr10 33207884 33207996 -107108769 - MER5B DNA MER1_type -4 174 59 1139 112 19 0 chr10 33208000 33208161 -107108604 - AluSg/x SINE Alu -15 297 134 1932 91 66 3 chr10 33208161 33208447 -107108318 - AluY SINE Alu -7 304 1 242 279 0 0 chr10 33208448 33208509 -107108256 + MER5B DNA MER1_type 116 176 -2 261 222 0 0 chr10 33208971 33209025 -107107740 + C-rich Low_complexity Low_complexity 4 57 0 911 163 6 12 chr10 33209860 33210032 -107106733 - FRAM SINE Alu -10 166 1 246 322 184 0 chr10 33210036 33210188 -107106577 - MIR SINE MIR -7 255 76 2375 77 10 10 chr10 33210413 33210720 -107106045 - AluSq SINE Alu -14 299 1 1548 202 0 14 chr10 33211474 33211751 -107105014 - AluJb SINE Alu -39 273 1 209 336 67 0 chr10 33212126 33212245 -107104520 + MIR SINE MIR 80 206 -56 1921 152 3 7 chr10 33212357 33212647 -107104118 - AluJo SINE Alu -23 289 1 215 261 70 52 chr10 33212654 33212769 -107103996 - L2 LINE L2 -16 3297 3181 1391 89 26 0 chr10 33213528 33213718 -107103047 + MER30 DNA MER1_type 1 195 -35 1926 75 0 4 chr10 33213864 33214116 -107102649 + L1PA8 LINE L1 5805 6055 -117 771 164 0 0 chr10 33214120 33214236 -107102529 - FLAM_C SINE Alu -22 121 6 1640 138 99 11 chr10 33214752 33215172 -107101593 + AluSx SINE Alu 5 449 0 1691 201 0 3 chr10 33215712 33216010 -107100755 - AluJb SINE Alu -15 297 1 834 219 51 20 chr10 33216071 33216267 -107100498 - MER58A DNA MER1_type 0 224 23 2463 58 0 3 chr10 33216950 33217243 -107099522 - AluY SINE Alu -19 292 1 2267 101 10 125 chr10 33217326 33217821 -107098944 - Tigger2 DNA MER2_type 0 2718 3 1020 154 63 91 chr10 33219412 33219665 -107097100 - AluJo SINE Alu -6 306 61 615 226 8 0 chr10 33219684 33219817 -107096948 + MLT1E2 LTR MaLR 65 198 -428 1525 243 78 23 chr10 33219859 33220292 -107096473 - MLT1E2 LTR MaLR -3 623 167 374 189 83 136 chr10 33220327 33220459 -107096306 + AluJb SINE Alu 49 173 -129 697 354 32 17 chr10 33220650 33220995 -107095770 - LTR33 LTR ERVL -171 350 1 601 272 19 0 chr10 33220996 33221158 -107095607 + HAL1 LINE L1 1669 1833 -674 * 1190 259 51 38 chr10 33221153 33221215 -107095550 - L1MEc LINE L1 -3309 2906 2846 3384 134 35 2 chr10 33221215 33221723 -107095042 - MER1A DNA MER1_type 0 527 3 1190 259 51 38 chr10 33221723 33222289 -107094476 - L1MEc LINE L1 -3369 2846 2230 1005 194 22 0 chr10 33222295 33222475 -107094290 - MER58A DNA MER1_type -4 220 37 2704 235 92 59 chr10 33222492 33222541 -107094224 - L1MEc LINE L1 -4123 2273 2227 2223 118 0 10 chr10 33222541 33222855 -107093910 - AluY SINE Alu 0 311 1 2704 235 92 59 chr10 33222855 33223527 -107093238 - L1MEc LINE L1 -4169 2227 1579 1629 146 30 61 chr10 33223527 33223822 -107092943 - AluJo SINE Alu -26 286 1 2704 235 92 59 chr10 33223822 33224526 -107092239 - L1MEc LINE L1 -4817 1579 800 2608 130 5 5 chr10 33224540 33224940 -107091825 - LTR43 LTR ERV1 0 602 203 327 167 197 0 chr10 33224946 33225012 -107091753 - MER58A DNA MER1_type -28 79 1 493 259 80 42 chr10 33225014 33225282 -107091483 + MER69 DNA AcHobo 2168 2449 -77 11514 33 0 0 chr10 33225282 33227389 -107089376 - L1PA4 LINE L1 -3 6152 4046 493 259 80 42 chr10 33227389 33227409 -107089356 + MER69 DNA AcHobo 2449 2467 -59 2484 90 3 0 chr10 33227416 33227727 -107089038 - AluSx SINE Alu 0 312 1 241 217 78 52 chr10 33228366 33228481 -107088284 + MIR SINE MIR 140 257 -5 685 89 105 16 chr10 33228557 33228681 -107088084 - AluYa5 SINE Alu -176 135 1 710 247 19 0 chr10 33229203 33229365 -107087400 + MER3 DNA MER1_type 1 165 -44 2539 173 61 19 chr10 33229372 33229535 -107087230 - L1MA9 LINE L1 0 6312 6157 219 36 0 0 chr10 33229535 33229563 -107087202 + (GA)n Simple_repeat Simple_repeat 1 28 0 2539 173 61 19 chr10 33229563 33229937 -107086828 - L1MA9 LINE L1 -155 6157 5752 242 191 0 0 chr10 33229943 33229990 -107086775 + MER3 DNA MER1_type 154 200 -9 1017 289 35 8 chr10 33230035 33230409 -107086356 - L1ME4a LINE L1 -244 5877 5494 369 316 132 20 chr10 33230508 33230910 -107085855 + LTR16A LTR ERVL 1 447 -3 1751 174 30 10 chr10 33231075 33231374 -107085391 + AluJo SINE Alu 1 305 -7 1776 185 7 3 chr10 33231571 33231869 -107084896 - AluJo SINE Alu -13 299 1 493 84 0 56 chr10 33233311 33233418 -107083347 + (TTTC)n Simple_repeat Simple_repeat 4 104 0 222 271 17 0 chr10 33233425 33233484 -107083281 + C-rich Low_complexity Low_complexity 1 60 0 2181 188 161 128 chr10 33233677 33233792 -107082973 + L1MC3 LINE L1 6672 6782 -1003 2234 101 0 7 chr10 33233792 33234088 -107082677 + AluSc SINE Alu 1 294 -15 2181 188 161 128 chr10 33234088 33234410 -107082355 + L1MC3 LINE L1 6782 7092 -693 457 262 19 0 chr10 33234410 33234513 -107082252 + MLT1F1 LTR MaLR 45 149 -418 2181 188 161 128 chr10 33234513 33234976 -107081789 + L1MC3 LINE L1 7092 7709 -76 2050 160 0 0 chr10 33235424 33235736 -107081029 - AluJo SINE Alu 0 312 1 649 255 112 61 chr10 33236659 33237169 -107079596 - Charlie7 DNA MER1_type 0 2612 2077 925 283 145 2 chr10 33237177 33237576 -107079189 - L1MC/D LINE L1 -2002 5806 5351 617 200 0 31 chr10 33237715 33237845 -107078920 + AluJb SINE Alu 153 278 -34 21 0 0 0 chr10 33237846 33237867 -107078898 + AT_rich Low_complexity Low_complexity 1 21 0 2162 111 4 0 chr10 33237867 33238173 -107078592 + AluSg SINE Alu 1 307 0 408 398 0 0 chr10 33238337 33238508 -107078257 + MIR SINE MIR 67 237 -25 2345 101 3 0 chr10 33238555 33238862 -107077903 - AluSp SINE Alu -4 309 2 269 167 4 40 chr10 33239026 33239101 -107077664 + L1P2 LINE L1 5704 5776 -379 2222 85 0 7 chr10 33239596 33239919 -107076846 + AluSc SINE Alu 1 321 0 781 158 0 15 chr10 33240118 33240251 -107076514 + FLAM_C SINE Alu 3 133 0 1794 141 0 4 chr10 33240718 33240988 -107075777 + AluSx SINE Alu 42 310 -2 1686 160 38 21 chr10 33241010 33241298 -107075467 + AluJo SINE Alu 1 293 -19 247 235 0 44 chr10 33241389 33241457 -107075308 + MIR SINE MIR 83 147 -61 515 145 0 24 chr10 33242224 33242307 -107074458 + AluJ/FLAM SINE Alu 2 82 -230 834 109 9 0 chr10 33242410 33242520 -107074245 - FLAM_C SINE Alu -32 111 1 1913 86 35 0 chr10 33242780 33243036 -107073729 + AluY SINE Alu 46 310 -1 27 0 0 0 chr10 33243079 33243106 -107073659 + AT_rich Low_complexity Low_complexity 1 27 0 1011 158 54 49 chr10 33243272 33243452 -107073313 + AluJo SINE Alu 101 279 -33 180 0 0 0 chr10 33243452 33243472 -107073293 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 611 217 31 0 chr10 33243474 33243603 -107073162 + FLAM_C SINE Alu 1 133 0 1011 158 54 49 chr10 33243603 33243622 -107073143 + AluJo SINE Alu 279 304 -8 1267 71 0 11 chr10 33243626 33243808 -107072957 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 468 163 10 10 chr10 33243836 33243934 -107072831 + GA-rich Low_complexity Low_complexity 4 101 0 1379 160 0 5 chr10 33245543 33245756 -107071009 - AluSx SINE Alu -100 212 1 3573 220 27 23 chr10 33245901 33247549 -107069216 + L1MD3 LINE L1 4282 5403 -743 284 245 0 4 chr10 33248756 33248997 -107067768 + (CA)n Simple_repeat Simple_repeat 1 239 0 180 229 214 43 chr10 33249659 33249729 -107067036 - L2 LINE L2 0 3313 3232 441 316 89 48 chr10 33249837 33250585 -107066180 - L2 LINE L2 -205 3067 2289 981 162 29 0 chr10 33250826 33250999 -107065766 + MER2 DNA MER2_type 2 179 -166 858 217 0 0 chr10 33251099 33251256 -107065509 - AluJb SINE Alu -142 170 14 1207 122 0 12 chr10 33251475 33251647 -107065118 + AluSg/x SINE Alu 122 291 -18 2320 82 4 0 chr10 33251650 33251999 -107064766 + AluY SINE Alu 1 350 0 237 97 0 0 chr10 33252570 33252601 -107064164 + (GA)n Simple_repeat Simple_repeat 1 31 0 693 114 0 0 chr10 33252601 33252706 -107064059 + (GAAAA)n Simple_repeat Simple_repeat 5 109 0 1700 177 10 13 chr10 33252842 33253141 -107063624 - AluJo SINE Alu -14 298 1 2299 94 0 3 chr10 33255632 33255930 -107060835 + AluSq SINE Alu 1 297 -16 1839 163 3 3 chr10 33255940 33256234 -107060531 + AluJb SINE Alu 1 294 -18 784 139 134 70 chr10 33256566 33256738 -107060027 + AluJo SINE Alu 15 197 -115 592 248 8 0 chr10 33256738 33256863 -107059902 + MER21B LTR ERV1 133 258 -605 2115 115 0 16 chr10 33256869 33257173 -107059592 + AluSc SINE Alu 2 300 -9 652 165 0 0 chr10 33257174 33257277 -107059488 + AluJo/FRAM SINE Alu 136 238 -74 2314 100 3 3 chr10 33257727 33258037 -107058728 - AluSq SINE Alu -3 310 1 22 0 0 0 chr10 33259605 33259627 -107057138 + AT_rich Low_complexity Low_complexity 1 22 0 1658 211 34 50 chr10 33259633 33260069 -107056696 + L1MB7 LINE L1 5668 6096 -88 1780 155 10 17 chr10 33260083 33260373 -107056392 + AluJo SINE Alu 2 289 -23 759 83 0 0 chr10 33260473 33260581 -107056184 + (GGAA)n Simple_repeat Simple_repeat 4 111 0 1032 134 27 0 chr10 33260581 33260730 -107056035 + FRAM SINE Alu 1 150 -26 35 24 0 0 chr10 33260731 33260773 -107055992 + AT_rich Low_complexity Low_complexity 1 42 0 1812 54 0 0 chr10 33260907 33261129 -107055636 + L1PA5 LINE L1 5931 6152 -2 27 0 0 0 chr10 33261129 33261156 -107055609 + AT_rich Low_complexity Low_complexity 1 27 0 186 291 58 68 chr10 33262994 33263097 -107053668 - MIR SINE MIR -42 220 119 1689 167 0 25 chr10 33263811 33264129 -107052636 - AluJo SINE Alu -2 310 1 1288 179 21 0 chr10 33265604 33265838 -107050927 - L1MA6 LINE L1 -75 6225 5987 231 36 0 0 chr10 33265935 33265963 -107050802 + (CA)n Simple_repeat Simple_repeat 2 29 0 289 318 33 40 chr10 33267726 33267877 -107048888 - MIR SINE MIR -104 158 9 271 109 0 36 chr10 33268145 33268200 -107048565 + (TTCCC)n Simple_repeat Simple_repeat 2 54 0 338 192 0 13 chr10 33268230 33268308 -107048457 + CT-rich Low_complexity Low_complexity 1 77 0 2011 122 35 0 chr10 33268537 33268825 -107047940 - AluSx SINE Alu -14 298 1 456 271 131 37 chr10 33269448 33269662 -107047103 + MIR SINE MIR 20 253 -9 1546 153 0 77 chr10 33270041 33270177 -107046588 + AluJb SINE Alu 1 146 -166 2095 89 4 0 chr10 33270177 33270457 -107046308 + AluSp SINE Alu 1 281 -32 699 47 47 0 chr10 33270457 33270563 -107046202 + (GAAA)n Simple_repeat Simple_repeat 2 112 0 1546 153 0 77 chr10 33270563 33270738 -107046027 + AluJb SINE Alu 144 289 -23 1379 234 50 34 chr10 33270742 33270994 -107045771 + MER21B LTR ERV1 14 260 -603 2298 85 3 0 chr10 33270994 33271289 -107045476 + AluSc SINE Alu 1 296 -13 1379 234 50 34 chr10 33271289 33271627 -107045138 + MER21B LTR ERV1 260 718 -145 2034 100 4 0 chr10 33271636 33271915 -107044850 - L1PA12 LINE L1 -15 6153 5874 846 58 0 0 chr10 33271915 33272019 -107044746 + L1P4 LINE L1 5684 5787 -381 794 221 74 22 chr10 33272119 33272350 -107044415 + L1MD3 LINE L1 7737 7979 -16 745 266 70 4 chr10 33272351 33272607 -107044158 - Charlie7 DNA MER1_type -898 1714 1442 1092 189 37 37 chr10 33272977 33273247 -107043518 - L1MB5 LINE L1 -1 6173 5904 586 259 38 49 chr10 33273253 33273438 -107043327 + MER5A DNA MER1_type 1 183 -6 779 219 102 20 chr10 33274098 33274294 -107042471 - AluJb SINE Alu -100 212 1 296 272 62 0 chr10 33274425 33274506 -107042259 + L2 LINE L2 2230 2315 -999 656 173 0 0 chr10 33275536 33275683 -107041082 - FLAM_A SINE Alu 0 164 18 1978 129 26 3 chr10 33276099 33276402 -107040363 + AluSg SINE Alu 1 310 0 463 213 128 35 chr10 33276430 33276571 -107040194 + L2 LINE L2 3160 3313 0 3040 99 25 2 chr10 33276647 33277081 -107039684 + L1PB1 LINE L1 5708 6151 0 1215 119 0 10 chr10 33278017 33278218 -107038547 + AluSc SINE Alu 111 309 0 335 203 0 14 chr10 33278319 33278393 -107038372 + Charlie5 DNA MER1_type 2552 2624 0 1649 180 0 26 chr10 33281884 33282195 -107034570 - AluJo SINE Alu -7 305 3 263 243 215 0 chr10 33282224 33282331 -107034434 + MIR3 SINE MIR 53 182 -26 231 291 78 29 chr10 33282990 33283093 -107033672 - MARNA DNA Mariner -31 555 448 361 313 123 5 chr10 33283124 33283319 -107033446 + MARNA DNA Mariner 234 451 -135 214 280 38 61 chr10 33283427 33283559 -107033206 - MIR SINE MIR -69 193 65 1269 171 13 0 chr10 33283876 33284110 -107032655 - L1MC1 LINE L1 -247 6086 5850 2116 103 10 0 chr10 33284111 33284531 -107032234 + AluSg SINE Alu 1 423 0 3484 192 20 18 chr10 33284531 33285896 -107030869 - L1MC1 LINE L1 -474 5859 4491 243 146 0 0 chr10 33286901 33286942 -107029823 + (CA)n Simple_repeat Simple_repeat 2 42 0 224 284 34 11 chr10 33288104 33288192 -107028573 + CT-rich Low_complexity Low_complexity 1 90 0 897 263 46 4 chr10 33288193 33288452 -107028313 - L1MC4 LINE L1 -152 7890 7621 841 188 26 86 chr10 33292503 33292553 -107024212 + MER58A DNA MER1_type 4 55 -2365 1679 169 0 25 chr10 33292553 33292867 -107023898 - AluJo SINE Alu -6 306 1 841 188 26 86 chr10 33292867 33293050 -107023715 + MER58A DNA MER1_type 55 223 -1 702 274 153 17 chr10 33294328 33294675 -107022090 - MLT1K LTR MaLR -174 414 21 229 335 147 13 chr10 33295292 33295516 -107021249 + L3 LINE CR1 1199 1452 -125 1121 74 0 14 chr10 33295744 33295892 -107020873 + LOR1a LTR ERV1 13 158 -339 1334 170 98 0 chr10 33295930 33296195 -107020570 + AluJb SINE Alu 21 311 -1 1028 129 6 0 chr10 33296211 33296374 -107020391 + LOR1a LTR ERV1 204 367 -130 27 29 0 0 chr10 33297902 33297936 -107018829 + AT_rich Low_complexity Low_complexity 1 34 0 1652 158 18 7 chr10 33298987 33299266 -107017499 + AluJo SINE Alu 1 282 -30 212 57 0 29 chr10 33299269 33299304 -107017461 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 197 224 75 30 chr10 33299742 33299809 -107016956 + MIR3 SINE MIR 5 74 -134 654 181 25 125 chr10 33299885 33300127 -107016638 + MLT1J LTR MaLR 110 409 -206 2193 76 4 0 chr10 33300705 33300981 -107015784 + AluSg SINE Alu 1 277 -33 312 70 0 0 chr10 33300985 33301028 -107015737 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1775 164 26 0 chr10 33301796 33302100 -107014665 - AluJo SINE Alu 0 312 1 2144 114 0 0 chr10 33302531 33302821 -107013944 + AluSq SINE Alu 1 290 -23 25 0 0 0 chr10 33302825 33302850 -107013915 + AT_rich Low_complexity Low_complexity 1 25 0 347 228 76 58 chr10 33303494 33303665 -107013100 + MER5B DNA MER1_type 5 178 0 21 0 0 0 chr10 33305789 33305810 -107010955 + AT_rich Low_complexity Low_complexity 1 21 0 2189 119 0 0 chr10 33306067 33306370 -107010395 + AluSc SINE Alu 1 303 -6 200 349 75 9 chr10 33307123 33307229 -107009536 - MER5B DNA MER1_type 0 178 66 317 261 33 11 chr10 33308657 33308749 -107008016 + MIR SINE MIR 19 112 -150 850 161 40 7 chr10 33309906 33310055 -107006710 - AluJb SINE Alu -22 290 137 1972 133 3 0 chr10 33310695 33310997 -107005768 + AluSx SINE Alu 1 303 -9 454 200 24 0 chr10 33311118 33311203 -107005562 - MER4C LTR ERV1 0 465 379 947 158 58 12 chr10 33311205 33311376 -107005389 - THE1C LTR MaLR -196 179 1 276 288 0 0 chr10 33311379 33311445 -107005320 - LTR59 LTR ERV1 -177 420 355 * 718 210 160 13 chr10 33311417 33311655 -107005110 - MER4C LTR ERV1 -192 273 1 2135 82 17 0 chr10 33311691 33311982 -107004783 - AluSx SINE Alu -16 296 1 2622 51 57 3 chr10 33313541 33313891 -107002874 - L1PA13 LINE L1 -1 6162 5794 406 120 53 0 chr10 33314211 33314286 -107002479 + L1MA5A LINE L1 6214 6292 -5 345 47 0 0 chr10 33314909 33314952 -107001813 + (TG)n Simple_repeat Simple_repeat 2 44 0 1478 163 16 0 chr10 33315105 33315356 -107001409 + AluJb SINE Alu 1 255 -57 913 178 0 6 chr10 33315369 33315532 -107001233 + AluJo SINE Alu 120 281 -31 2377 163 20 26 chr10 33315742 33316202 -107000563 - LTR32 LTR ERVL 0 471 15 2031 151 0 0 chr10 33316857 33317169 -106999596 + AluJb SINE Alu 1 312 0 1688 174 0 4 chr10 33317689 33318015 -106998750 - AluJo SINE Alu 0 327 3 2164 151 20 13 chr10 33318231 33318621 -106998144 - L1MB3 LINE L1 -8 6175 5783 734 168 0 0 chr10 33319524 33319637 -106997128 + FLAM_C SINE Alu 1 113 -30 195 125 0 0 chr10 33319642 33319682 -106997083 + (T)n Simple_repeat Simple_repeat 1 40 0 680 213 0 0 chr10 33319789 33319947 -106996818 + AluJb SINE Alu 161 318 0 21 0 0 0 chr10 33320176 33320197 -106996568 + AT_rich Low_complexity Low_complexity 1 21 0 195 318 0 16 chr10 33321028 33321091 -106995674 + MIR SINE MIR 36 97 -165 23 33 0 0 chr10 33321850 33321880 -106994885 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr10 33322169 33322190 -106994575 + AT_rich Low_complexity Low_complexity 1 21 0 940 176 6 6 chr10 33322190 33322360 -106994405 + L1PA16 LINE L1 5997 6166 0 285 75 0 0 chr10 33322605 33322645 -106994120 + (TC)n Simple_repeat Simple_repeat 1 40 0 1935 133 3 0 chr10 33322645 33322938 -106993827 - AluJb SINE Alu -16 296 3 317 222 111 33 chr10 33323400 33323490 -106993275 - L2 LINE L2 -6 3266 3170 2244 87 0 7 chr10 33323813 33324113 -106992652 + AluSq SINE Alu 1 298 -15 270 176 0 0 chr10 33326787 33326838 -106989927 + CT-rich Low_complexity Low_complexity 4 54 0 624 62 0 0 chr10 33326841 33326922 -106989843 + (TCCA)n Simple_repeat Simple_repeat 4 84 0 2323 75 3 0 chr10 33328172 33328464 -106988301 - AluSc SINE Alu -16 293 1 21 0 0 0 chr10 33329102 33329123 -106987642 + AT_rich Low_complexity Low_complexity 1 21 0 2021 116 7 23 chr10 33329139 33329449 -106987316 + AluSc SINE Alu 1 305 -4 220 167 0 33 chr10 33329806 33329866 -106986899 + GA-rich Low_complexity Low_complexity 2 59 0 40 21 0 0 chr10 33330026 33330073 -106986692 + AT_rich Low_complexity Low_complexity 1 47 0 1416 162 0 78 chr10 33330073 33330369 -106986396 - AluJo SINE Alu -22 290 18 289 307 137 1 chr10 33331660 33331770 -106984995 + MIR SINE MIR 36 159 -50 361 207 81 45 chr10 33331794 33331905 -106984860 - MER63 DNA MER1_type -273 789 675 205 330 30 0 chr10 33332195 33332305 -106984460 - MIR SINE MIR -17 191 78 514 314 66 19 chr10 33333537 33333808 -106982957 + L3 LINE CR1 1095 1378 -199 2362 67 7 0 chr10 33333813 33334112 -106982653 + AluY SINE Alu 1 301 -10 2045 119 0 31 chr10 33334115 33334434 -106982331 + AluSg1 SINE Alu 1 309 0 2132 117 3 0 chr10 33334710 33335019 -106981746 - AluSx SINE Alu -2 310 1 588 275 38 33 chr10 33335560 33335771 -106980994 - L1ME LINE L1 -380 5741 5530 827 165 104 12 chr10 33335803 33335967 -106980798 + FRAM SINE Alu 1 173 -3 265 283 61 0 chr10 33336019 33336118 -106980647 + L1ME4a LINE L1 5804 5908 -213 181 274 78 0 chr10 33336294 33336345 -106980420 - MIR SINE MIR -2 260 206 261 280 160 76 chr10 33337178 33337394 -106979371 + L2 LINE L2 2463 2660 -654 408 290 15 0 chr10 33337394 33337525 -106979240 + MER94 DNA DNA 2 134 0 261 280 160 76 chr10 33337525 33337740 -106979025 + L2 LINE L2 2660 2930 -384 4349 219 33 29 chr10 33337894 33339398 -106977367 + L1MCb LINE L1 3 1517 -4851 206 369 54 13 chr10 33339426 33339575 -106977190 + L2 LINE L2 2640 2794 -520 1545 157 30 50 chr10 33339723 33339857 -106976908 + AluJo SINE Alu 6 141 -171 1360 166 17 83 chr10 33339857 33340195 -106976570 + AluJb SINE Alu 1 318 0 1545 157 30 50 chr10 33340195 33340359 -106976406 + AluJo SINE Alu 141 299 -13 468 246 105 12 chr10 33340488 33340659 -106976106 + LTR37B LTR ERV1 12 198 -270 393 239 18 9 chr10 33340704 33340817 -106975948 + LTR37B LTR ERV1 197 310 -158 245 288 132 47 chr10 33340999 33341064 -106975701 + LTR16B LTR ERVL 34 92 -372 2085 141 15 24 chr10 33341064 33341404 -106975361 + MER1B DNA MER1_type 1 337 0 245 288 132 47 chr10 33341404 33341595 -106975170 + LTR16B LTR ERVL 92 312 -152 24 0 0 0 chr10 33342026 33342050 -106974715 + AT_rich Low_complexity Low_complexity 1 24 0 184 217 29 43 chr10 33343748 33343817 -106972948 + L2 LINE L2 2992 3059 -213 2038 131 45 25 chr10 33343858 33344217 -106972548 - MLT1B LTR MaLR -3 387 22 1748 157 7 3 chr10 33344289 33344576 -106972189 - AluJo SINE Alu -24 288 1 1975 149 0 0 chr10 33345225 33345533 -106971232 - AluJo SINE Alu -4 308 1 1702 159 3 10 chr10 33346323 33346612 -106970153 - AluJb SINE Alu -23 289 3 3362 152 0 36 chr10 33346855 33347403 -106969362 + MER1A DNA MER1_type 1 528 -1 1975 115 0 10 chr10 33347539 33347863 -106968902 - AluY SINE Alu 0 311 1 948 168 0 12 chr10 33347867 33348040 -106968725 - AluJo SINE Alu -18 294 124 823 226 0 0 chr10 33348259 33348414 -106968351 + AluJb SINE Alu 14 168 -144 1782 137 21 3 chr10 33348514 33348627 -106968138 + AluJb SINE Alu 15 125 -187 183 42 0 0 chr10 33348627 33348651 -106968114 + (CA)n Simple_repeat Simple_repeat 2 25 0 1782 137 21 3 chr10 33348651 33348822 -106967943 + AluJb SINE Alu 125 304 -8 1595 172 11 4 chr10 33350361 33350640 -106966125 - AluJo SINE Alu -31 281 1 806 211 92 11 chr10 33351208 33351393 -106965372 - MER20 DNA MER1_type -19 200 1 1546 182 3 26 chr10 33357393 33357700 -106959065 - AluJb SINE Alu -1 311 12 292 127 91 18 chr10 33357700 33358141 -106958624 + MIR3 SINE MIR 121 179 -29 185 222 0 185 chr10 33357710 33357750 -106959015 + L3b LINE CR1 1515 1534 -49 * 2249 119 21 52 chr10 33357750 33358137 -106958628 - THE1C LTR MaLR 0 375 1 185 222 0 185 chr10 33358137 33358177 -106958588 + L3b LINE CR1 1534 1580 -3 1886 144 37 0 chr10 33358833 33359131 -106957634 + AluSx SINE Alu 2 310 -2 1979 146 0 16 chr10 33359154 33359469 -106957296 + AluSx SINE Alu 1 310 -2 405 328 15 30 chr10 33359581 33359715 -106957050 - L2 LINE L2 -2 3311 3180 1819 116 0 57 chr10 33360055 33360356 -106956409 - AluSq SINE Alu -29 284 1 337 314 14 7 chr10 33360564 33360704 -106956061 + LTR67 LTR ERVL 417 557 0 2004 143 3 3 chr10 33361042 33361349 -106955416 - Tigger1 DNA MER2_type -194 2224 1918 475 144 11 0 chr10 33361361 33361451 -106955314 - L1PB2 LINE L1 -3 6148 6058 1947 135 0 19 chr10 33361456 33361774 -106954991 - AluSx SINE Alu 0 312 1 632 203 57 0 chr10 33362081 33362204 -106954561 + MLT1A1 LTR MaLR 3 132 -233 2090 171 79 3 chr10 33362223 33362268 -106954497 - MSTB LTR MaLR -16 410 370 1718 114 0 0 chr10 33362268 33362513 -106954252 + AluSx SINE Alu 55 299 -13 2090 171 79 3 chr10 33362513 33362848 -106953917 - MSTB LTR MaLR -56 370 1 930 214 64 56 chr10 33362848 33363010 -106953755 + MLT1A1 LTR MaLR 134 293 -72 297 0 0 0 chr10 33363010 33363043 -106953722 + (TG)n Simple_repeat Simple_repeat 2 34 0 1826 155 0 3 chr10 33363043 33363334 -106953431 - AluSx SINE Alu -16 296 7 930 214 64 56 chr10 33363334 33363400 -106953365 + MLT1A1 LTR MaLR 292 365 0 1925 168 0 13 chr10 33364048 33364363 -106952402 - AluJb SINE Alu -1 311 1 2225 123 3 0 chr10 33364371 33364672 -106952093 - AluSx SINE Alu -10 302 1 189 107 0 0 chr10 33365746 33365774 -106950991 + (TG)n Simple_repeat Simple_repeat 2 29 0 21 0 0 0 chr10 33365862 33365883 -106950882 + AT_rich Low_complexity Low_complexity 1 21 0 1753 143 10 43 chr10 33368600 33368901 -106947864 + AluJo SINE Alu 1 291 -21 5306 142 102 130 chr10 33369546 33371155 -106945610 - pTR5 LTR ERV1 0 2438 743 772 269 75 5 chr10 33371816 33372028 -106944737 - MLT1H1 LTR MaLR -328 227 1 421 235 10 3 chr10 33372034 33372142 -106944623 + MLT1J LTR MaLR 228 418 -197 264 306 45 0 chr10 33372656 33372790 -106943975 - MLT1J2-int LTR MaLR -833 538 399 1898 158 0 29 chr10 33372914 33373224 -106943541 + AluSx SINE Alu 1 301 -11 268 284 14 0 chr10 33373244 33373318 -106943447 - MLT1J2-int LTR MaLR -1283 88 14 194 322 161 21 chr10 33373506 33373649 -106943116 - L2 LINE L2 -212 3060 2898 596 310 13 8 chr10 33373951 33374190 -106942575 + LTR16B LTR ERVL 223 462 -2 499 274 76 36 chr10 33374267 33374544 -106942221 - L2 LINE L2 -710 2604 2317 627 198 0 8 chr10 33374846 33374967 -106941798 + FLAM_A SINE Alu 4 123 -10 680 214 0 53 chr10 33375108 33375295 -106941470 + AluJo SINE Alu 118 294 -18 287 213 62 0 chr10 33376719 33376799 -106939966 - HERVFH21 LTR ERV1 -6427 102 18 195 42 0 0 chr10 33379305 33379329 -106937436 + (T)n Simple_repeat Simple_repeat 1 24 0 25 65 0 0 chr10 33379792 33379838 -106936927 + GC_rich Low_complexity Low_complexity 1 46 0 205 289 58 41 chr10 33380182 33380303 -106936462 + MIR3 SINE MIR 44 166 -42 990 158 55 0 chr10 33381114 33381279 -106935486 - AluJo/FRAM SINE Alu -4 308 135 1674 203 3 7 chr10 33381279 33381584 -106935181 - AluJo SINE Alu -8 304 1 745 275 201 26 chr10 33382010 33382388 -106934377 - MLT1J2 LTR MaLR 0 450 7 477 277 47 107 chr10 33382403 33382832 -106933933 - LTR67 LTR ERVL -88 469 67 631 345 76 26 chr10 33383008 33383390 -106933375 - L3 LINE CR1 -3 1574 1174 397 256 227 19 chr10 33384124 33384393 -106932372 - L1ME4a LINE L1 -4 6117 5793 317 208 0 123 chr10 33384428 33384534 -106932231 - L2 LINE L2 -38 3275 3183 2300 99 0 37 chr10 33384760 33385083 -106931682 - AluSq SINE Alu 0 313 3 1832 147 36 19 chr10 33385170 33385477 -106931288 - AluJo SINE Alu 0 312 1 348 206 0 0 chr10 33385478 33385546 -106931219 + MSTD LTR MaLR 329 396 0 226 75 25 0 chr10 33386454 33386494 -106930271 - HSMAR1 DNA Mariner -1246 41 1 329 24 0 0 chr10 33386507 33386548 -106930217 + MADE1 DNA Mariner 40 80 0 192 316 23 30 chr10 33386569 33386702 -106930063 + L2 LINE L2 2726 2857 -457 824 270 138 6 chr10 33386750 33387069 -106929696 + L2 LINE L2 2953 3313 0 240 362 31 16 chr10 33387435 33387562 -106929203 + LTR16C LTR ERVL 100 228 -263 1745 168 27 3 chr10 33387879 33388215 -106928550 - MER7A DNA MER2_type -1 345 1 353 323 70 7 chr10 33388241 33388472 -106928293 + MERVL LTR ERVL 410 617 -4379 1700 179 0 42 chr10 33388873 33389110 -106927655 - AluJo SINE Alu 0 312 131 2044 103 21 28 chr10 33389110 33389401 -106927364 + AluSx SINE Alu 3 291 -21 1700 179 0 42 chr10 33389401 33389527 -106927238 - AluJo SINE Alu -181 131 1 365 402 4 4 chr10 33389529 33389763 -106927002 + MERVL LTR ERVL 1056 1289 -3707 1999 135 11 3 chr10 33389802 33390131 -106926634 - AluSq SINE Alu 0 331 1 2214 114 117 16 chr10 33390131 33390507 -106926258 - MSTA LTR MaLR -14 414 1 903 315 64 30 chr10 33390701 33391139 -106925626 + MERVL LTR ERVL 1724 2176 -3478 582 300 115 12 chr10 33391191 33391434 -106925331 + MERVL LTR ERVL 2326 2593 -3171 769 351 20 46 chr10 33391471 33391861 -106924904 + MERVL LTR ERVL 2644 3023 -1973 368 343 0 4 chr10 33391891 33392033 -106924732 + MERVL LTR ERVL 3144 3259 -2226 1607 166 0 23 chr10 33392969 33393234 -106923531 - AluJo SINE Alu -53 259 1 244 261 72 63 chr10 33394373 33394484 -106922281 - MIR SINE MIR -149 113 2 2302 119 0 0 chr10 33394674 33394977 -106921788 - AluSx SINE Alu -7 305 3 406 95 135 0 chr10 33394979 33395053 -106921712 - L1MA3 LINE L1 -44 6261 6178 2060 199 19 17 chr10 33395481 33395958 -106920807 + L1MB8 LINE L1 5695 6172 -6 723 102 0 17 chr10 33395958 33396076 -106920689 - AluSg/x SINE Alu -19 291 176 315 245 20 59 chr10 33396211 33396313 -106920452 + L1ME LINE L1 5224 5321 -825 370 346 63 0 chr10 33396318 33396523 -106920242 + L1ME LINE L1 5519 5736 -385 1931 141 3 0 chr10 33396682 33396989 -106919776 - AluJb SINE Alu 0 308 1 2542 61 0 0 chr10 33397372 33397666 -106919099 + AluY SINE Alu 1 294 -17 2289 159 35 46 chr10 33397807 33398267 -106918498 + MLT1C LTR MaLR 13 467 0 1867 163 0 27 chr10 33400101 33400402 -106916363 + AluJo SINE Alu 1 293 -19 380 282 155 0 chr10 33401710 33401884 -106914881 - MER113 DNA MER1_type? -110 411 211 1120 164 23 90 chr10 33401884 33402100 -106914665 - L1MA10 LINE L1 -4 6330 6138 1947 141 17 3 chr10 33402100 33402398 -106914367 - AluSx SINE Alu -10 302 1 1120 164 23 90 chr10 33402398 33402480 -106914285 - L1MA10 LINE L1 -196 6138 6052 2136 148 0 0 chr10 33403738 33404049 -106912716 - AluSx SINE Alu -1 311 1 1674 163 14 24 chr10 33404286 33404580 -106912185 + AluJo SINE Alu 1 291 -21 354 335 43 16 chr10 33405660 33405845 -106910920 + MIR SINE MIR 34 223 -39 251 172 125 16 chr10 33405965 33406029 -106910736 - MIR SINE MIR -100 162 92 345 197 0 0 chr10 33408066 33408142 -106908623 + (CAT)n Simple_repeat Simple_repeat 1 76 0 374 239 176 0 chr10 33408513 33408665 -106908100 - MER5A DNA MER1_type -3 186 4 234 62 0 0 chr10 33409050 33409082 -106907683 + (TC)n Simple_repeat Simple_repeat 1 32 0 410 285 83 0 chr10 33409356 33409500 -106907265 + MER103 DNA DNA 1 156 -10 253 167 0 0 chr10 33409600 33409642 -106907123 - 5S rRNA rRNA -79 42 1 2073 164 43 33 chr10 33410467 33410582 -106906183 - MSTB LTR MaLR 0 426 314 1866 136 57 14 chr10 33410582 33410862 -106905903 + AluSx SINE Alu 1 292 -20 2073 164 43 33 chr10 33410862 33411168 -106905597 - MSTB LTR MaLR -112 314 1 595 221 198 16 chr10 33411676 33411864 -106904901 - MIR SINE MIR 0 262 37 280 0 24 24 chr10 33411925 33411966 -106904799 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 2247 112 0 10 chr10 33412043 33412347 -106904418 + AluSg1 SINE Alu 1 301 -8 195 273 80 0 chr10 33413083 33413171 -106903594 + L2 LINE L2 2216 2310 -1004 1726 175 0 13 chr10 33415616 33415930 -106900835 - AluJo SINE Alu -2 310 1 263 241 13 25 chr10 33416527 33416606 -106900159 - MIR3 SINE MIR -24 184 107 249 337 0 10 chr10 33416653 33416751 -106900014 + G-rich Low_complexity Low_complexity 2 98 0 296 285 138 0 chr10 33417876 33417999 -106898766 + MER5B DNA MER1_type 35 174 -4 255 147 73 0 chr10 33418071 33418139 -106898626 + A-rich Low_complexity Low_complexity 5 77 0 770 181 0 0 chr10 33418146 33418273 -106898492 + FRAM SINE Alu 20 146 -30 473 0 18 0 chr10 33418277 33418334 -106898431 + (TAA)n Simple_repeat Simple_repeat 3 60 0 187 281 22 45 chr10 33418534 33418623 -106898142 + L2 LINE L2 3005 3091 -181 431 268 108 0 chr10 33418817 33418974 -106897791 + MER5B DNA MER1_type 1 174 -4 2997 122 16 0 chr10 33419079 33419520 -106897245 - L1PB3 LINE L1 -4 6150 5703 302 335 60 32 chr10 33419962 33420180 -106896585 + MLT1K LTR MaLR 252 475 -113 2154 100 0 0 chr10 33420966 33421256 -106895509 + AluSq SINE Alu 7 296 -17 628 213 12 71 chr10 33421863 33422032 -106894733 + MIR SINE MIR 83 241 -21 180 0 0 0 chr10 33422103 33422123 -106894642 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1544 156 26 4 chr10 33422125 33422394 -106894371 - AluJo SINE Alu -25 287 13 243 337 59 10 chr10 33423448 33423549 -106893216 - L2 LINE L2 -20 3252 3147 319 291 56 11 chr10 33423662 33423785 -106892980 - MIR SINE MIR -50 158 33 2188 94 0 25 chr10 33430745 33431063 -106885702 + AluSx SINE Alu 1 310 -2 269 259 86 61 chr10 33431479 33431676 -106885089 - MER112 DNA MER1_type -33 227 26 5027 89 97 28 chr10 33431863 33433126 -106883639 + L1PA13 LINE L1 4834 6160 -3 254 343 10 20 chr10 33433128 33433230 -106883535 - MIR SINE MIR -157 105 5 1905 112 31 3 chr10 33433247 33433541 -106883224 + AluSx SINE Alu 1 302 -10 924 278 85 20 chr10 33433755 33434155 -106882610 - L1MC4a LINE L1 -1816 5992 5567 21 71 0 0 chr10 33434751 33434793 -106881972 + AT_rich Low_complexity Low_complexity 1 42 0 401 296 49 35 chr10 33435969 33436111 -106880654 - L2 LINE L2 -1 3271 3128 21 0 0 0 chr10 33436330 33436351 -106880414 + AT_rich Low_complexity Low_complexity 1 21 0 2041 114 0 25 chr10 33436360 33436676 -106880089 + AluSg SINE Alu 1 308 -2 359 295 156 6 chr10 33436824 33436997 -106879768 - MIR SINE MIR 0 262 64 2014 53 43 66 chr10 33437357 33437661 -106879104 + AluY SINE Alu 1 297 -14 23 0 0 0 chr10 33439002 33439025 -106877740 + AT_rich Low_complexity Low_complexity 1 23 0 4265 173 94 18 chr10 33441249 33442760 -106874005 + MER52A LTR ERV1 66 1755 0 199 318 36 82 chr10 33445461 33445571 -106871194 + L2 LINE L2 3103 3207 -65 1113 247 57 13 chr10 33446195 33446511 -106870254 - MER46C DNA MER2_type 0 338 9 1611 145 7 25 chr10 33446584 33446866 -106869899 + AluSq SINE Alu 1 277 -36 1515 155 12 16 chr10 33448011 33448269 -106868496 - AluSq SINE Alu -56 257 1 1469 189 3 34 chr10 33449027 33449349 -106867416 + AluJo SINE Alu 1 312 0 286 278 35 70 chr10 33449627 33449705 -106867060 - MIR SINE MIR -58 150 76 2029 191 6 3 chr10 33449705 33450066 -106866699 - MLT1A1 LTR MaLR 0 365 4 286 278 35 70 chr10 33450066 33450102 -106866663 - MIR SINE MIR -132 76 40 1721 161 140 42 chr10 33450284 33450670 -106866095 + MSTC LTR MaLR 1 424 -4 463 215 0 21 chr10 33450992 33451136 -106865629 + GA-rich Low_complexity Low_complexity 2 142 0 2125 82 33 23 chr10 33451306 33451610 -106865155 - AluSp SINE Alu -6 307 1 714 281 102 57 chr10 33452401 33452817 -106863948 + L2 LINE L2 2714 3110 -203 1970 125 7 0 chr10 33452817 33453097 -106863668 + AluSx SINE Alu 1 282 -30 195 100 0 0 chr10 33453098 33453128 -106863637 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 714 281 102 57 chr10 33453128 33453140 -106863625 + L2 LINE L2 3110 3120 -193 2206 62 21 3 chr10 33453140 33453428 -106863337 + AluY SINE Alu 1 293 -18 714 281 102 57 chr10 33453428 33453556 -106863209 + L2 LINE L2 3120 3305 -8 271 267 107 23 chr10 33454732 33454863 -106861902 + L1MC/D LINE L1 5722 5863 -1945 302 194 15 15 chr10 33455044 33455111 -106861654 + L2 LINE L2 3205 3271 -1 332 318 119 13 chr10 33456031 33456182 -106860583 - MIR SINE MIR -16 246 80 21 36 0 0 chr10 33456297 33456325 -106860440 + AT_rich Low_complexity Low_complexity 1 28 0 2145 113 7 0 chr10 33456354 33456654 -106860111 - AluSx SINE Alu -10 302 1 218 300 0 0 chr10 33457611 33457671 -106859094 - L2 LINE L2 -10 3303 3244 242 301 48 0 chr10 33458101 33458184 -106858581 - MIR SINE MIR -30 232 146 1671 156 14 3 chr10 33458189 33458477 -106858288 - AluJb SINE Alu -21 291 1 188 309 49 37 chr10 33458501 33458582 -106858183 - MIR SINE MIR -180 82 1 522 278 106 24 chr10 33458620 33458851 -106857914 + MIR SINE MIR 16 256 -6 3166 146 99 15 chr10 33459026 33459622 -106857143 + MER39B LTR ERV1 6 651 -2 1691 181 35 44 chr10 33460173 33460511 -106856254 + MER2 DNA MER2_type 1 335 -10 1667 183 3 13 chr10 33461392 33461704 -106855061 - AluJo SINE Alu -3 309 1 454 297 153 36 chr10 33463487 33463736 -106853029 + L2 LINE L2 3035 3312 -1 229 239 184 16 chr10 33464029 33464159 -106852606 - MIR SINE MIR -89 119 5 185 326 0 0 chr10 33464185 33464231 -106852534 + L2 LINE L2 3122 3167 -105 24 0 0 0 chr10 33464573 33464597 -106852168 + AT_rich Low_complexity Low_complexity 1 24 0 240 253 13 76 chr10 33464905 33464984 -106851781 + MIR3 SINE MIR 87 160 -48 3229 200 76 75 chr10 33464985 33465652 -106851113 + Charlie1 DNA MER1_type 2 667 -2094 2497 69 0 0 chr10 33465652 33465958 -106850807 + AluY SINE Alu 1 306 -5 3229 200 76 75 chr10 33465958 33466699 -106850066 + Charlie1 DNA MER1_type 667 2761 0 24 0 0 0 chr10 33466932 33466956 -106849809 + AT_rich Low_complexity Low_complexity 1 24 0 1365 138 73 4 chr10 33467165 33467440 -106849325 - AluSq SINE Alu -19 294 1 567 167 10 0 chr10 33467606 33467702 -106849063 + Charlie1 DNA MER1_type 2665 2761 0 24 0 0 0 chr10 33467935 33467959 -106848806 + AT_rich Low_complexity Low_complexity 1 24 0 2305 98 0 3 chr10 33468176 33468473 -106848292 - AluSq SINE Alu -17 296 1 2353 99 0 3 chr10 33469193 33469507 -106847258 + AluSq SINE Alu 1 313 0 2862 220 14 24 chr10 33470279 33470937 -106845828 - MER82 DNA MER2_type 0 653 3 247 248 144 32 chr10 33470971 33471096 -106845669 - MIR SINE MIR -109 153 15 2008 114 3 88 chr10 33472216 33472558 -106844207 + AluSq SINE Alu 1 313 0 2401 83 0 0 chr10 33472571 33472873 -106843892 + AluY SINE Alu 1 302 -9 441 0 0 0 chr10 33474217 33474266 -106842499 + (TA)n Simple_repeat Simple_repeat 1 49 0 1866 163 0 3 chr10 33474269 33474552 -106842213 - AluJo SINE Alu -30 282 1 21 0 0 0 chr10 33474606 33474627 -106842138 + AT_rich Low_complexity Low_complexity 1 21 0 186 103 0 0 chr10 33474648 33474677 -106842088 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 52 82 0 0 chr10 33474848 33474970 -106841795 + AT_rich Low_complexity Low_complexity 1 122 0 253 270 16 16 chr10 33474977 33475040 -106841725 + MIR SINE MIR 48 110 -152 442 293 102 18 chr10 33475437 33475604 -106841161 - MIR3 SINE MIR -21 187 7 497 302 88 44 chr10 33476034 33476239 -106840526 - MIR SINE MIR -19 243 30 21 36 0 0 chr10 33476570 33476598 -106840167 + AT_rich Low_complexity Low_complexity 1 28 0 29 0 0 0 chr10 33476969 33476998 -106839767 + AT_rich Low_complexity Low_complexity 1 29 0 227 250 103 52 chr10 33477715 33477831 -106838934 + L1ME4a LINE L1 5968 6089 -32 27 29 0 0 chr10 33477974 33478008 -106838757 + AT_rich Low_complexity Low_complexity 1 34 0 759 202 6 23 chr10 33478038 33478154 -106838611 + L1ME1 LINE L1 36 150 -6246 2727 180 223 56 chr10 33478154 33479027 -106837738 + LTR28 LTR ERV1 2 1020 0 759 202 6 23 chr10 33479027 33479083 -106837682 + L1ME1 LINE L1 150 205 -6191 2877 251 91 16 chr10 33479134 33480230 -106836535 + L1ME1 LINE L1 349 1527 -4869 2398 102 0 0 chr10 33480251 33480564 -106836201 + AluSp SINE Alu 1 313 0 1431 252 62 33 chr10 33480635 33482975 -106833790 + L1ME1 LINE L1 3588 6228 -7 422 293 121 39 chr10 33483167 33483498 -106833267 + L1ME LINE L1 5318 5675 -446 23 48 0 48 chr10 33483592 33483655 -106833110 + AT_rich Low_complexity Low_complexity 1 60 0 1271 166 32 108 chr10 33483692 33484006 -106832759 + AluJb SINE Alu 2 291 -11 23 78 0 0 chr10 33484346 33484397 -106832368 + AT_rich Low_complexity Low_complexity 1 51 0 281 239 252 32 chr10 33485564 33485719 -106831046 - MIR SINE MIR -27 235 47 749 293 48 26 chr10 33485898 33486171 -106830594 + L3 LINE CR1 1136 1414 -163 2250 136 14 8 chr10 33486526 33486887 -106829878 - MER47A DNA MER2_type 0 366 4 276 145 174 29 chr10 33486934 33487003 -106829762 - L1ME1 LINE L1 -6 6160 6082 2286 204 63 25 chr10 33487006 33487484 -106829281 + MER74B LTR ERVL 43 546 -76 2153 72 0 56 chr10 33487484 33487790 -106828975 - AluSg SINE Alu -21 289 1 2286 204 63 25 chr10 33487790 33487870 -106828895 + MER74B LTR ERVL 546 622 0 1291 243 146 30 chr10 33487870 33488343 -106828422 - L1ME1 LINE L1 -96 6070 5543 210 37 0 0 chr10 33488447 33488474 -106828291 + (CA)n Simple_repeat Simple_repeat 2 28 0 4433 108 9 14 chr10 33488474 33489139 -106827626 - L1PA13 LINE L1 -8 6155 5494 201 128 0 51 chr10 33489498 33489537 -106827228 + (TCTCC)n Simple_repeat Simple_repeat 5 41 0 1886 126 19 0 chr10 33489537 33489807 -106826958 - AluSx SINE Alu -36 276 2 291 274 62 62 chr10 33489941 33490087 -106826678 + MIR SINE MIR 67 212 -50 264 59 0 0 chr10 33490186 33490220 -106826545 + (A)n Simple_repeat Simple_repeat 1 34 0 242 297 144 9 chr10 33490653 33490764 -106826001 + L2 LINE L2 2574 2699 -615 658 236 0 12 chr10 33490849 33491014 -106825751 - HAL1 LINE L1 -108 2399 2237 817 283 122 25 chr10 33491065 33491468 -106825297 - HAL1 LINE L1 -953 1554 1113 22 70 0 0 chr10 33491628 33491671 -106825094 + AT_rich Low_complexity Low_complexity 1 43 0 1391 116 116 101 chr10 33492260 33492588 -106824177 - MER44D DNA MER2_type -6 603 1 715 291 143 9 chr10 33492893 33493243 -106823522 - L1MC4a LINE L1 -1895 5913 5517 585 268 89 5 chr10 33495335 33495525 -106821240 + Tigger8 DNA MER2_type 68 273 -393 4740 152 26 43 chr10 33495569 33496123 -106820642 + L1MB2 LINE L1 5098 5625 -546 2210 92 20 3 chr10 33496123 33496426 -106820339 + AluY SINE Alu 1 308 -3 4740 152 26 43 chr10 33496426 33496954 -106819811 + L1MB2 LINE L1 5625 6160 -11 576 291 39 57 chr10 33496954 33497339 -106819426 + Tigger8 DNA MER2_type 278 655 -11 23 54 0 0 chr10 33498079 33498116 -106818649 + AT_rich Low_complexity Low_complexity 1 37 0 233 297 207 0 chr10 33498428 33498573 -106818192 + L1ME4a LINE L1 5843 6017 -104 280 263 30 0 chr10 33498607 33498706 -106818059 + (TA)n Simple_repeat Simple_repeat 1 102 0 215 378 67 0 chr10 33499201 33499291 -106817474 + L2 LINE L2 3133 3228 -44 1148 236 46 0 chr10 33500109 33500393 -106816372 - MER58B DNA MER1_type 0 341 45 205 220 102 17 chr10 33500415 33500474 -106816291 + MIR SINE MIR 30 93 -169 809 289 23 5 chr10 33500600 33500818 -106815947 - MIR SINE MIR -6 256 35 939 59 0 0 chr10 33501422 33501541 -106815224 - pTR5 LTR ERV1 -2046 392 274 7417 109 115 79 chr10 33501546 33503457 -106813308 - pTR5 LTR ERV1 0 2438 17 557 346 97 30 chr10 33504389 33505167 -106811598 + L2 LINE L2 2420 3245 -27 229 178 0 0 chr10 33505169 33505214 -106811551 - L1MB7 LINE L1 -20 6164 6120 10037 193 58 37 chr10 33505253 33507078 -106809687 - L1M4 LINE L1 -551 5627 3715 2026 147 0 0 chr10 33507078 33507377 -106809388 - AluSq SINE Alu -13 300 2 10037 193 58 37 chr10 33507377 33508501 -106808264 - L1M4 LINE L1 -2463 3715 2616 605 323 137 43 chr10 33511784 33512689 -106804076 + L2 LINE L2 1298 2287 -1027 521 278 40 7 chr10 33512715 33512866 -106803899 + MIR SINE MIR 2 157 -105 603 353 76 32 chr10 33512899 33513684 -106803081 + L2 LINE L2 2295 3118 -154 1863 189 91 67 chr10 33514186 33514737 -106802028 + L1MD2 LINE L1 5794 6357 -2 21 36 0 0 chr10 33514924 33514952 -106801813 + AT_rich Low_complexity Low_complexity 1 28 0 270 257 233 29 chr10 33516796 33517041 -106799724 - L1ME LINE L1 -371 5793 5499 2117 217 100 55 chr10 33517096 33518604 -106798161 - L1ME2 LINE L1 -10 6154 4406 1224 168 0 0 chr10 33519714 33519916 -106796849 - AluSg/x SINE Alu 0 310 109 27 29 0 0 chr10 33521417 33521451 -106795314 + AT_rich Low_complexity Low_complexity 1 34 0 233 235 176 42 chr10 33521549 33521668 -106795097 - HAL1b LINE L1 -896 452 318 1066 254 233 16 chr10 33521829 33522388 -106794377 + Charlie2b DNA MER1_type 4 683 -2099 1873 214 83 13 chr10 33522446 33522656 -106794109 + Charlie2a DNA MER1_type 1471 1665 -1197 2256 113 0 3 chr10 33522656 33522965 -106793800 + AluSq SINE Alu 1 308 -5 1873 214 83 13 chr10 33522965 33523283 -106793482 + Charlie2a DNA MER1_type 1665 2036 -826 324 169 0 0 chr10 33523310 33523375 -106793390 - Charlie2 DNA MER1_type -131 2731 2667 368 241 64 97 chr10 33523517 33523828 -106792937 - L1ME LINE L1 -1102 5044 4744 1636 196 153 12 chr10 33524195 33524277 -106792488 + L1MD3 LINE L1 7415 7484 -511 2474 152 50 7 chr10 33524277 33524719 -106792046 - LOR1b LTR ERV1 0 461 1 1636 196 153 12 chr10 33524719 33525054 -106791711 + L1MD3 LINE L1 7484 7891 -104 469 299 25 70 chr10 33525070 33525384 -106791381 - L1ME2 LINE L1 -1769 4377 4078 743 202 55 37 chr10 33526184 33526402 -106790363 + L1ME2 LINE L1 5943 6164 0 2110 116 38 0 chr10 33526492 33526785 -106789980 + AluSg SINE Alu 1 304 -6 277 346 0 0 chr10 33527140 33527244 -106789521 + MER94 DNA DNA 1 104 -30 363 305 68 17 chr10 33527805 33527923 -106788842 + MIR SINE MIR 21 144 -64 22 0 0 0 chr10 33528584 33528606 -106788159 + AT_rich Low_complexity Low_complexity 1 22 0 284 300 80 20 chr10 33528814 33529014 -106787751 - HAL1 LINE L1 -1989 518 307 533 169 0 0 chr10 33529217 33529300 -106787465 + AluY SINE Alu 1 83 -227 4684 117 62 47 chr10 33529300 33530110 -106786655 - LTR12 LTR ERV1 0 826 5 1804 176 98 54 chr10 33530126 33530700 -106786065 - pTR5 LTR ERV1 -1094 1344 746 1546 108 8 38 chr10 33530700 33530940 -106785825 + AluSc SINE Alu 77 309 0 770 241 101 31 chr10 33531262 33531548 -106785217 + MLT1K LTR MaLR 283 588 0 243 180 20 0 chr10 33532249 33532299 -106784466 - Charlie8 DNA MER1_type -14 2403 2353 429 276 184 39 chr10 33532325 33532492 -106784273 - Charlie8 DNA MER1_type -1772 645 504 684 236 66 62 chr10 33532492 33532751 -106784014 - MIR SINE MIR 0 262 3 429 276 184 39 chr10 33532751 33532772 -106783993 - Charlie8 DNA MER1_type -1913 504 487 1944 194 59 11 chr10 33532772 33533216 -106783549 + MLT1C LTR MaLR 2 466 -1 429 276 184 39 chr10 33533216 33533487 -106783278 - Charlie8 DNA MER1_type -1930 487 118 863 210 13 0 chr10 33533564 33533721 -106783044 + AluJo SINE Alu 123 281 -31 28 0 0 0 chr10 33533722 33533750 -106783015 + AT_rich Low_complexity Low_complexity 1 28 0 2614 64 0 0 chr10 33533969 33534280 -106782485 + AluY SINE Alu 1 311 0 432 228 89 24 chr10 33535212 33535335 -106781430 - MIR SINE MIR -67 195 65 1973 132 93 39 chr10 33535337 33535719 -106781046 - MSTB1 LTR MaLR 0 432 25 2269 136 27 8 chr10 33535719 33536087 -106780678 - THE1C LTR MaLR 0 375 1 1973 132 93 39 chr10 33536087 33536112 -106780653 - MSTB1 LTR MaLR -407 25 3 240 264 359 0 chr10 33536219 33536378 -106780387 + MIR SINE MIR 37 252 -10 2210 103 3 0 chr10 33536496 33536786 -106779979 + AluSx SINE Alu 1 291 -21 377 306 24 18 chr10 33538067 33538237 -106778528 - MER5B DNA MER1_type -4 174 4 2359 88 7 0 chr10 33538386 33538680 -106778085 - AluSq SINE Alu -17 296 1 2172 103 0 4 chr10 33538882 33539198 -106777567 - AluSc SINE Alu 0 315 1 198 284 37 73 chr10 33539199 33539308 -106777457 + L2 LINE L2 3168 3272 0 273 338 97 43 chr10 33540290 33540681 -106776084 - L2 LINE L2 -36 3277 2866 2014 131 0 0 chr10 33541164 33541476 -106775289 - AluSx SINE Alu 0 312 1 239 298 0 0 chr10 33543459 33543516 -106773249 + GA-rich Low_complexity Low_complexity 1 57 0 315 0 0 0 chr10 33543964 33543999 -106772766 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 241 287 40 0 chr10 33544715 33544816 -106771949 - L1MEc LINE L1 -2637 3578 3474 567 192 90 4 chr10 33544901 33545135 -106771630 - L1MEc LINE L1 -2732 3483 3230 * 973 225 22 44 chr10 33545132 33545496 -106771269 - L1MEc LINE L1 -3519 2696 2341 6303 17 9 3 chr10 33545511 33546276 -106770489 - L1PA2 LINE L1 0 6155 5386 3219 35 0 0 chr10 33546270 33546694 -106770071 + L1PA2 LINE L1 4963 5386 -760 * 1219 244 51 18 chr10 33546696 33547147 -106769618 - L1MEc LINE L1 -4006 2390 1925 914 307 18 18 chr10 33547147 33547473 -106769292 + MLT1H1 LTR MaLR 230 555 0 4782 49 21 0 chr10 33547514 33548142 -106768623 - L1PA2 LINE L1 -5502 644 4 * 35236 34 24 2 chr10 33548141 33553515 -106763250 + L1PA2 LINE L1 654 6150 -5 450 235 13 13 chr10 33553533 33553682 -106763083 + L1M4 LINE L1 2272 2420 -3726 504 42 0 0 chr10 33553682 33553754 -106763011 + L1PA2 LINE L1 6084 6155 0 2087 119 7 3 chr10 33553966 33554260 -106762505 + AluSg SINE Alu 1 295 -15 1376 289 92 4 chr10 33555395 33555896 -106760869 + MLT1H1 LTR MaLR 1 545 -10 1504 211 7 10 chr10 33556197 33556505 -106760260 + AluY SINE Alu 5 311 0 284 317 188 41 chr10 33557278 33557672 -106759093 + L2 LINE L2 2819 3270 -2 642 85 57 0 chr10 33558493 33558599 -106758166 + L1 LINE L1 4640 4751 -1395 629 251 55 0 chr10 33558652 33558835 -106757930 + L1M2 LINE L1 3413 3605 -2541 2708 152 46 17 chr10 33558843 33559804 -106756961 + L1M2 LINE L1 4753 5754 -546 745 221 183 53 chr10 33560249 33560469 -106756296 - L2 LINE L2 -2 3311 3121 2614 58 0 3 chr10 33560469 33560780 -106755985 + AluY SINE Alu 1 310 -1 745 221 183 53 chr10 33560780 33561137 -106755628 - L2 LINE L2 -192 3121 2653 736 321 0 20 chr10 33561969 33562274 -106754491 - AluJo SINE Alu 0 312 14 1584 228 42 20 chr10 33562585 33563042 -106753723 - L1ME1 LINE L1 -89 6313 5847 1134 228 56 44 chr10 33563057 33563389 -106753376 + MLT2D LTR ERVL 15 354 -60 2401 50 0 33 chr10 33563389 33563690 -106753075 + AluY SINE Alu 1 291 -20 1134 228 56 44 chr10 33563690 33563747 -106753018 + MLT2D LTR ERVL 354 409 -5 2409 221 41 16 chr10 33563747 33564652 -106752113 - L1ME1 LINE L1 -549 5853 4927 22 0 0 0 chr10 33564732 33564754 -106752011 + AT_rich Low_complexity Low_complexity 1 22 0 385 235 0 59 chr10 33564860 33564962 -106751803 - L2 LINE L2 -3 3269 3174 570 39 0 0 chr10 33565105 33565183 -106751582 + L1HS LINE L1 6078 6155 0 37 39 0 0 chr10 33565183 33565234 -106751531 + AT_rich Low_complexity Low_complexity 1 51 0 1051 158 0 0 chr10 33565234 33565392 -106751373 - FAM SINE Alu -17 158 1 2348 102 0 3 chr10 33565537 33565842 -106750923 + AluSx SINE Alu 1 304 -8 2547 55 6 10 chr10 33566515 33566827 -106749938 - AluY SINE Alu 0 311 1 1299 278 108 11 chr10 33567010 33567568 -106749197 - MLT1L LTR MaLR 0 615 4 234 338 41 28 chr10 33567686 33567831 -106748934 + L2 LINE L2 1776 1922 -1392 2815 228 83 33 chr10 33567856 33569327 -106747438 - L1ME1 LINE L1 -2975 3407 1885 1626 255 11 25 chr10 33569480 33570010 -106746755 - L1ME1 LINE L1 -4550 1834 1312 1755 193 0 13 chr10 33570031 33570337 -106746428 - AluJb SINE Alu -10 302 1 1449 174 59 51 chr10 33570388 33570744 -106746021 - MSTC LTR MaLR 0 428 70 23 0 0 0 chr10 33571001 33571024 -106745741 + AT_rich Low_complexity Low_complexity 1 23 0 2333 99 16 0 chr10 33571303 33571606 -106745159 + AluSq SINE Alu 1 308 -5 1953 106 31 31 chr10 33571780 33572073 -106744692 + AluSg SINE Alu 1 293 -17 5558 103 43 10 chr10 33573020 33574118 -106742647 + L1PA16 LINE L1 5018 6157 -9 1702 159 11 7 chr10 33574257 33574534 -106742231 + AluJo SINE Alu 21 298 -14 2344 113 0 0 chr10 33574577 33574886 -106741879 + AluY SINE Alu 1 309 -2 219 286 0 0 chr10 33574886 33574935 -106741830 - L2 LINE L2 -31 3241 3193 2458 78 7 0 chr10 33576623 33576930 -106739835 - AluSp SINE Alu -4 309 1 453 36 0 0 chr10 33578294 33578349 -106738416 + (CA)n Simple_repeat Simple_repeat 2 56 0 244 236 231 21 chr10 33578552 33578715 -106738050 - MIR SINE MIR 0 262 51 267 327 40 20 chr10 33579376 33579477 -106737288 + MIR SINE MIR 160 262 0 21 0 0 0 chr10 33579754 33579775 -106736990 + AT_rich Low_complexity Low_complexity 1 21 0 2413 84 0 0 chr10 33580158 33580457 -106736308 - AluY SINE Alu -12 299 1 273 29 0 0 chr10 33581141 33581175 -106735590 + (CAT)n Simple_repeat Simple_repeat 2 35 0 220 320 144 16 chr10 33581443 33581568 -106735197 + L2 LINE L2 3168 3308 -5 187 200 110 50 chr10 33581607 33581707 -106735058 + L2 LINE L2 3200 3305 -8 1609 199 31 0 chr10 33582386 33582672 -106734093 + AluJo SINE Alu 1 295 -17 382 332 98 30 chr10 33582956 33583131 -106733634 - MIR3 SINE MIR -12 196 3 21 71 0 0 chr10 33583893 33583935 -106732830 + AT_rich Low_complexity Low_complexity 1 42 0 25 0 0 0 chr10 33584075 33584100 -106732665 + AT_rich Low_complexity Low_complexity 1 25 0 29 28 0 0 chr10 33584228 33584264 -106732501 + AT_rich Low_complexity Low_complexity 1 36 0 214 268 27 18 chr10 33584298 33584410 -106732355 + A-rich Low_complexity Low_complexity 1 113 0 1534 171 50 34 chr10 33584703 33585001 -106731764 + AluJo SINE Alu 1 303 -9 450 274 175 21 chr10 33585548 33585936 -106730829 - MLT1J LTR MaLR -23 462 44 2155 116 3 0 chr10 33585946 33586240 -106730525 + AluSg SINE Alu 1 295 -15 409 284 6 12 chr10 33586684 33586703 -106730062 - L1MA10 LINE L1 0 6334 6316 927 218 17 84 chr10 33586703 33587047 -106729718 - L1ME2 LINE L1 -11 6153 5833 1159 104 35 0 chr10 33587048 33587221 -106729544 - Tigger1 DNA MER2_type -1265 1153 975 1818 136 20 0 chr10 33587235 33587529 -106729236 + Tigger1 DNA MER2_type 1152 1451 -967 2403 106 0 0 chr10 33587529 33587886 -106728879 + L1P LINE L1 4514 4870 -1276 913 61 46 0 chr10 33587891 33588022 -106728743 - L1P LINE L1 -3514 2632 2496 288 264 94 19 chr10 33588023 33588129 -106728636 - L3 LINE CR1 -206 1371 1258 1633 285 158 26 chr10 33588318 33589059 -106727706 - L2 LINE L2 -401 2913 2075 367 187 201 45 chr10 33589730 33589839 -106726926 + MIR SINE MIR 108 243 -19 2243 94 3 10 chr10 33589839 33590136 -106726629 + AluSg SINE Alu 1 295 -15 367 187 201 45 chr10 33590136 33590160 -106726605 + MIR SINE MIR 243 262 0 2457 87 0 0 chr10 33590333 33590644 -106726121 - AluY SINE Alu 0 311 1 2182 142 132 5 chr10 33591546 33591926 -106724839 - MSTA LTR MaLR 0 428 1 25 0 0 0 chr10 33592027 33592052 -106724713 + AT_rich Low_complexity Low_complexity 1 25 0 1022 195 30 26 chr10 33592114 33592381 -106724384 - L1MD3 LINE L1 -2 7993 7726 2154 212 77 45 chr10 33593992 33594197 -106722568 + MER82 DNA MER2_type 3 200 -453 1703 176 64 9 chr10 33594197 33594526 -106722239 + MER7A DNA MER2_type 2 346 0 2154 212 77 45 chr10 33594526 33594896 -106721869 + MER82 DNA MER2_type 200 602 -51 1058 151 40 104 chr10 33594896 33595147 -106721618 - MER46A DNA MER2_type -1 235 1 2154 212 77 45 chr10 33595147 33595193 -106721572 + MER82 DNA MER2_type 602 645 -8 926 216 0 0 chr10 33595485 33595647 -106721118 + AluJb SINE Alu 137 298 -14 1461 156 53 113 chr10 33595822 33596219 -106720546 + MLT1A2 LTR MaLR 2 374 0 824 197 85 64 chr10 33596242 33596632 -106720133 - MER114 LTR ERV -250 398 1 225 35 0 0 chr10 33596794 33596823 -106719942 - MLT2B2 LTR ERVL -2 513 485 1976 198 49 11 chr10 33597139 33597584 -106719181 + MLT2C2 LTR ERVL 1 462 -2 245 293 104 19 chr10 33597797 33597903 -106718862 + L2 LINE L2 3153 3267 -5 259 244 0 87 chr10 33598154 33598269 -106718496 + L1MC4a LINE L1 6559 6663 -1145 991 195 48 78 chr10 33598306 33598701 -106718064 + L1MC5 LINE L1 6857 7239 -722 688 266 0 30 chr10 33598722 33598891 -106717874 + MER5A DNA MER1_type 14 177 -12 589 272 19 14 chr10 33598913 33599126 -106717639 + L1MC5 LINE L1 7295 7508 -453 2108 273 29 65 chr10 33599206 33599973 -106716792 + L1M4b LINE L1 11 749 -6110 428 167 217 8 chr10 33600413 33600533 -106716232 + MSTC LTR MaLR 284 428 0 5714 241 35 45 chr10 33600535 33600725 -106716040 + MSTC-int LTR MaLR 2 192 -1543 2168 124 7 0 chr10 33600725 33601024 -106715741 - AluSx SINE Alu -11 301 1 5714 241 35 45 chr10 33601024 33602507 -106714258 + MSTC-int LTR MaLR 192 1658 -77 265 330 137 52 chr10 33602762 33602995 -106713770 + L2 LINE L2 2181 2433 -881 417 263 263 7 chr10 33603039 33603176 -106713589 + MER5A DNA MER1_type 18 189 0 185 305 182 45 chr10 33603181 33603335 -106713430 + L2 LINE L2 2465 2639 -675 202 333 0 0 chr10 33603561 33603621 -106713144 + L2 LINE L2 2695 2754 -560 226 239 277 8 chr10 33605797 33605927 -106710838 + MER20B DNA MER1_type 25 189 -594 775 276 86 0 chr10 33606369 33606579 -106710186 + L2 LINE L2 2550 2777 -537 523 278 199 50 chr10 33606624 33606779 -106709986 - L2 LINE L2 -905 2409 2278 1112 196 5 14 chr10 33606779 33606999 -106709766 + MER20 DNA MER1_type 2 219 0 523 278 199 50 chr10 33606999 33607246 -106709519 - L2 LINE L2 -1036 2278 1947 237 345 97 0 chr10 33607419 33607564 -106709201 - L2 LINE L2 -2222 1092 934 2736 175 56 79 chr10 33607687 33608494 -106708271 + L1MA9 LINE L1 5487 6274 -38 401 209 23 12 chr10 33608623 33608709 -106708056 + MIR SINE MIR 48 134 -128 1205 196 56 116 chr10 33608720 33608801 -106707964 + MLT1D LTR MaLR 1 85 -420 4019 181 79 11 chr10 33608801 33609608 -106707157 + MER21B LTR ERV1 1 862 -1 1205 196 56 116 chr10 33609608 33609998 -106706767 + MLT1D LTR MaLR 85 439 -66 2379 86 0 13 chr10 33609998 33610312 -106706453 - AluSg SINE Alu 0 310 1 1205 196 56 116 chr10 33610312 33610376 -106706389 + MLT1D LTR MaLR 439 505 0 268 301 24 24 chr10 33610393 33610476 -106706289 + MIR SINE MIR 162 244 -18 483 305 21 14 chr10 33610560 33610701 -106706064 + MIR3 SINE MIR 61 202 -6 4288 154 56 11 chr10 33611009 33611935 -106704830 - L1MB7 LINE L1 -9 6175 5209 2326 98 0 10 chr10 33612572 33612877 -106703888 - AluSg SINE Alu -6 304 3 1217 218 4 30 chr10 33613337 33613599 -106703166 + AluJo SINE Alu 1 255 -57 193 257 150 62 chr10 33614049 33614162 -106702603 - L2 LINE L2 -14 3299 3177 1717 88 13 108 chr10 33614381 33614688 -106702077 + AluSx SINE Alu 35 312 0 1083 182 21 0 chr10 33614725 33614912 -106701853 - MER58A DNA MER1_type 0 224 34 295 276 13 0 chr10 33616698 33616774 -106699991 + Tigger3(Golem) DNA MER2_type 2 78 -2951 2166 122 0 7 chr10 33616775 33617070 -106699695 - AluSq SINE Alu -20 293 1 1750 185 7 3 chr10 33617095 33617392 -106699373 - AluJb SINE Alu -14 298 1 1144 53 0 0 chr10 33617395 33617527 -106699238 - AluY SINE Alu -179 132 1 1193 119 9 55 chr10 33617528 33617747 -106699018 + MSTB1 LTR MaLR 223 431 -1 687 150 0 53 chr10 33619574 33619707 -106697058 + L1PB4 LINE L1 6019 6144 -12 2196 120 3 0 chr10 33619714 33620006 -106696759 + AluSp SINE Alu 1 293 -20 1931 112 0 31 chr10 33621715 33622002 -106694763 - AluSq SINE Alu -11 302 25 330 226 71 0 chr10 33622592 33622676 -106694089 - MIR SINE MIR -10 252 163 2919 167 32 20 chr10 33622679 33622707 -106694058 - L1MA4A LINE L1 -141 6162 6136 645 127 25 17 chr10 33622707 33622825 -106693940 - L1MA4A LINE L1 -4 6299 6181 2919 167 32 20 chr10 33622825 33623382 -106693383 - L1MA4A LINE L1 -167 6136 5570 861 122 8 15 chr10 33623499 33623630 -106693135 - FLAM_C SINE Alu 0 143 14 1792 139 64 39 chr10 33623775 33623913 -106692852 + MSTA LTR MaLR 60 193 -235 1895 129 14 14 chr10 33623913 33624207 -106692558 + AluY SINE Alu 1 294 -17 1792 139 64 39 chr10 33624207 33624427 -106692338 + MSTA LTR MaLR 193 427 -1 1512 115 67 52 chr10 33624428 33624698 -106692067 - Tigger2a DNA MER2_type -160 274 1 2042 135 0 0 chr10 33624762 33625083 -106691682 - AluSx SINE Alu 0 321 1 1810 148 23 0 chr10 33625403 33625707 -106691058 + AluSq SINE Alu 3 313 0 2062 211 82 19 chr10 33625953 33626601 -106690164 + L1M4 LINE L1 2412 3100 -3046 228 331 48 35 chr10 33626697 33626842 -106689923 - L2 LINE L2 -1392 1922 1776 1461 280 109 12 chr10 33626960 33627518 -106689247 + MLT1L LTR MaLR 4 615 0 2242 99 6 10 chr10 33627701 33628013 -106688752 + AluY SINE Alu 1 311 0 1511 201 0 26 chr10 33628271 33628574 -106688191 + AluJo SINE Alu 1 295 -17 369 316 68 63 chr10 33629529 33629719 -106687046 + L2 LINE L2 2924 3114 -158 2623 45 0 7 chr10 33630031 33630339 -106686426 - AluSp SINE Alu -7 306 1 433 236 136 78 chr10 33630400 33630591 -106686174 - Charlie8 DNA MER1_type -2136 281 80 997 198 6 6 chr10 33630592 33630764 -106686001 - Tigger2a DNA MER2_type -1 433 262 1158 113 25 39 chr10 33630765 33630969 -106685796 + MSTA LTR MaLR 1 201 -227 2835 230 30 5 chr10 33631077 33631703 -106685062 - L1MEc LINE L1 -5492 904 263 1435 209 39 26 chr10 33631708 33632015 -106684750 + MLT2C1 LTR ERVL 34 344 -53 360 320 16 24 chr10 33632073 33632198 -106684567 + L2 LINE L2 3181 3304 -9 1664 179 0 27 chr10 33632758 33633054 -106683711 - AluJo SINE Alu -24 288 1 285 311 10 0 chr10 33635204 33635307 -106681458 + L1MC/D LINE L1 5669 5772 -2036 602 250 53 74 chr10 33635333 33635474 -106681291 + MIR SINE MIR 13 148 -114 2220 125 0 0 chr10 33635474 33635771 -106680994 + AluSg SINE Alu 1 297 -13 602 250 53 74 chr10 33635771 33635873 -106680892 + MIR SINE MIR 148 251 -11 2408 72 0 3 chr10 33635879 33636170 -106680595 + AluSc SINE Alu 4 293 -16 1121 146 96 9 chr10 33636170 33636390 -106680375 + MSTA LTR MaLR 189 427 -1 1471 122 67 52 chr10 33636391 33636661 -106680104 - Tigger2a DNA MER2_type -160 274 1 1976 136 4 0 chr10 33636725 33637041 -106679724 - AluSx SINE Alu 0 317 1 2288 102 3 0 chr10 33637362 33637667 -106679098 + AluSq SINE Alu 3 308 -5 230 250 0 0 chr10 33638229 33638293 -106678472 + L1ME LINE L1 5386 5449 -672 264 169 31 31 chr10 33638328 33638393 -106678372 + L1ME LINE L1 5523 5587 -575 728 231 119 61 chr10 33638534 33638578 -106678187 - LTR16A1 LTR ERVL -1 456 416 2305 123 0 0 chr10 33638578 33638888 -106677877 - AluSx SINE Alu -2 310 1 728 231 119 61 chr10 33638888 33639155 -106677610 - LTR16A1 LTR ERVL -41 416 127 355 267 52 17 chr10 33640183 33640299 -106676466 + MIR SINE MIR 52 171 -91 336 301 111 7 chr10 33640337 33640490 -106676275 + MIR SINE MIR 27 195 -67 1294 83 0 0 chr10 33640500 33640669 -106676096 + L1PB1 LINE L1 5781 5949 -202 186 313 0 0 chr10 33640838 33640886 -106675879 + MIR SINE MIR 213 260 -2 577 110 0 24 chr10 33640952 33641034 -106675731 + MADE1 DNA Mariner 1 80 0 2371 106 0 0 chr10 33641048 33641360 -106675405 - AluSx SINE Alu 0 312 1 953 147 0 13 chr10 33641674 33641824 -106674941 - FRAM SINE Alu -23 153 6 323 96 19 0 chr10 33641874 33641926 -106674839 + (GGAA)n Simple_repeat Simple_repeat 2 54 0 4648 63 2 2 chr10 33642600 33643152 -106673613 + L1PA8 LINE L1 5607 6158 -14 617 254 63 26 chr10 33643582 33643771 -106672994 - MIR SINE MIR -40 222 27 295 382 15 8 chr10 33645346 33645477 -106671288 + MER5A DNA MER1_type 21 152 -37 282 342 108 0 chr10 33646193 33646304 -106670461 - MIR3 SINE MIR -52 156 34 411 73 0 0 chr10 33648652 33648707 -106668058 + (TG)n Simple_repeat Simple_repeat 2 56 0 571 135 0 0 chr10 33649303 33649392 -106667373 + L1PB3 LINE L1 6066 6154 0 1722 138 174 22 chr10 33649616 33649934 -106666831 - LTR47A LTR ERVL 0 452 71 1708 204 0 7 chr10 33649934 33650238 -106666527 + AluJo SINE Alu 1 302 -10 1722 138 174 22 chr10 33650238 33650280 -106666485 - LTR47A LTR ERVL -381 71 37 377 162 27 203 chr10 33651094 33651309 -106665456 - LTR45B LTR ERV1 -11 514 324 289 257 19 38 chr10 33651354 33651459 -106665306 - MER72 LTR ERV1 -243 479 377 326 225 28 0 chr10 33651725 33651796 -106664969 + MER117 DNA MER1_type 88 160 -37 594 209 37 37 chr10 33652871 33653005 -106663760 + MIR SINE MIR 7 140 -122 585 213 30 41 chr10 33654227 33654396 -106662369 - MIR SINE MIR -17 245 79 1680 177 4 0 chr10 33654783 33655049 -106661716 + AluSx SINE Alu 1 267 -45 1517 195 61 10 chr10 33655643 33655940 -106660825 - AluJo SINE Alu 0 312 1 21 0 0 0 chr10 33656770 33656791 -106659974 + AT_rich Low_complexity Low_complexity 1 21 0 36 0 0 0 chr10 33656979 33657015 -106659750 + AT_rich Low_complexity Low_complexity 1 36 0 306 87 20 101 chr10 33657015 33657164 -106659601 + (TAAAAA)n Simple_repeat Simple_repeat 1 137 0 50 0 0 0 chr10 33657164 33657214 -106659551 + AT_rich Low_complexity Low_complexity 1 50 0 2285 90 7 0 chr10 33657775 33658074 -106658691 - AluSg SINE Alu -9 301 1 430 331 41 14 chr10 33658106 33658396 -106658369 + L1ME LINE L1 5523 5820 -301 1737 144 0 25 chr10 33658409 33658693 -106658072 + AluJo SINE Alu 4 280 -32 578 240 151 0 chr10 33658759 33658951 -106657814 + LTR50 LTR ERVL 4 224 -571 334 325 61 15 chr10 33659055 33659252 -106657513 + LTR50 LTR ERVL 457 662 -133 27 73 0 0 chr10 33659290 33659345 -106657420 + AT_rich Low_complexity Low_complexity 1 55 0 219 338 181 31 chr10 33659681 33659974 -106656791 + L3 LINE CR1 70 406 -1171 229 316 25 0 chr10 33659993 33660072 -106656693 - L2 LINE L2 0 3272 3192 1635 171 10 32 chr10 33661046 33661356 -106655409 + AluJo SINE Alu 1 303 -9 334 330 110 47 chr10 33661851 33661905 -106654860 - L2 LINE L2 0 3313 3264 1295 285 58 25 chr10 33661905 33662354 -106654411 + LTR16B LTR ERVL 1 464 0 334 330 110 47 chr10 33662354 33662599 -106654166 - L2 LINE L2 -49 3264 2995 279 0 0 0 chr10 33663014 33663045 -106653720 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 682 128 30 105 chr10 33663051 33663103 -106653662 - FLAM_C SINE Alu -189 123 69 2265 98 3 3 chr10 33663103 33663400 -106653365 + AluSx SINE Alu 3 299 -13 682 128 30 105 chr10 33663400 33663480 -106653285 - FLAM_C SINE Alu -243 69 1 1474 238 99 16 chr10 33663778 33664316 -106652449 + HsTC2 DNA Tc2 1281 1869 -29 1778 142 42 0 chr10 33664316 33664604 -106652161 + AluSx SINE Alu 3 302 -10 1474 238 99 16 chr10 33664604 33664629 -106652136 + HsTC2 DNA Tc2 1869 1891 -7 372 335 12 6 chr10 33664669 33664839 -106651926 - L1ME LINE L1 -304 5817 5647 387 0 0 0 chr10 33665089 33665132 -106651633 + (TCCA)n Simple_repeat Simple_repeat 4 46 0 182 244 22 0 chr10 33665288 33665333 -106651432 - L2 LINE L2 -566 2748 2703 219 349 101 0 chr10 33665709 33665818 -106650947 + L2 LINE L2 2955 3074 -198 464 277 77 8 chr10 33665891 33666021 -106650744 + MER91C DNA MER1_type 2 140 0 2294 104 0 10 chr10 33666029 33666336 -106650429 - AluSx SINE Alu -8 304 1 351 314 0 0 chr10 33666349 33666435 -106650330 + L2 LINE L2 3136 3221 -51 1585 166 21 25 chr10 33666468 33666822 -106649943 - AluJo SINE Alu 0 353 1 1393 163 12 40 chr10 33667343 33667595 -106649170 + AluJo SINE Alu 11 255 -57 238 258 125 58 chr10 33667742 33667862 -106648903 - MLT1J LTR MaLR -55 456 329 1612 131 0 0 chr10 33668066 33668288 -106648477 + AluSx SINE Alu 1 222 -90 232 188 125 0 chr10 33668363 33668411 -106648354 - MER5A DNA MER1_type -135 54 1 751 191 7 43 chr10 33668416 33668557 -106648208 + AluJo SINE Alu 3 138 -174 234 36 0 0 chr10 33668557 33668585 -106648180 + AluJo SINE Alu 262 289 -13 183 326 129 22 chr10 33669141 33669365 -106647400 + L2 LINE L2 2812 3059 -213 236 77 26 0 chr10 33669528 33669567 -106647198 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 2592 53 0 0 chr10 33670613 33670915 -106645850 - AluY SINE Alu -9 302 1 2363 84 0 3 chr10 33671095 33671391 -106645374 - AluSc SINE Alu -14 295 1 21 0 0 0 chr10 33671465 33671486 -106645279 + AT_rich Low_complexity Low_complexity 1 21 0 10874 139 13 25 chr10 33672443 33674021 -106642744 - L1MA4A LINE L1 -5 6298 4702 2158 132 3 6 chr10 33674021 33674332 -106642433 + AluSq SINE Alu 1 310 -3 10874 139 13 25 chr10 33674332 33675469 -106641296 - L1MA4A LINE L1 -1601 4702 3552 2077 96 0 11 chr10 33675469 33675741 -106641024 - AluSc SINE Alu -40 269 1 10874 139 13 25 chr10 33675741 33676023 -106640742 - L1MA4A LINE L1 -2751 3552 3340 1866 94 3 118 chr10 33676023 33676363 -106640402 - AluSg SINE Alu -9 301 1 10874 139 13 25 chr10 33676363 33676450 -106640315 - L1MA4A LINE L1 -2963 3340 3253 4897 133 16 33 chr10 33676776 33677689 -106639076 - pTR5 LTR ERV1 -797 1641 744 1414 161 18 37 chr10 33677690 33677963 -106638802 + THE1B LTR MaLR 97 364 0 462 138 12 0 chr10 33678456 33678536 -106638229 + L1PA16 LINE L1 6070 6150 -16 1535 167 29 40 chr10 33678553 33678898 -106637867 + AluJo SINE Alu 13 354 0 1854 131 4 0 chr10 33678954 33679222 -106637543 - AluSx SINE Alu -9 303 35 23 0 0 0 chr10 33679696 33679719 -106637046 + AT_rich Low_complexity Low_complexity 1 23 0 609 240 86 27 chr10 33679865 33680113 -106636652 + MLT1I LTR MaLR 72 299 -110 1120 286 70 25 chr10 33680163 33680603 -106636162 - LTR40c LTR ERVL -5 460 1 284 219 114 29 chr10 33680603 33680678 -106636087 + MLT1J2 LTR MaLR 334 417 -33 240 273 86 0 chr10 33680719 33680847 -106635918 - L1 LINE L1 -1828 4318 4180 925 262 81 20 chr10 33680943 33681241 -106635524 + LTR50 LTR ERVL 1 316 -479 1013 208 123 7 chr10 33681285 33681554 -106635211 + LTR50 LTR ERVL 496 795 0 273 259 68 14 chr10 33681634 33681781 -106634984 - L1 LINE L1 -2188 3958 3804 222 287 7 28 chr10 33681830 33681973 -106634792 + (TA)n Simple_repeat Simple_repeat 1 140 0 187 274 20 0 chr10 33682173 33682224 -106634541 + L2 LINE L2 3261 3312 -1 180 0 0 0 chr10 33683708 33683728 -106633037 + (TG)n Simple_repeat Simple_repeat 2 21 0 2306 78 7 26 chr10 33683770 33684079 -106632686 - AluSx SINE Alu -9 303 1 1003 92 7 0 chr10 33684245 33684386 -106632379 - L1P2 LINE L1 -495 5660 5519 * 6211 36 8 5 chr10 33684380 33685256 -106631509 + L1P2 LINE L1 4618 5492 -663 4105 203 31 10 chr10 33685241 33686331 -106630434 + L1MB3 LINE L1 4364 5484 -699 * 723 100 0 0 chr10 33686331 33686431 -106630334 + L1PA13 LINE L1 6045 6144 -19 4105 203 31 10 chr10 33686431 33686627 -106630138 + L1MB3 LINE L1 5484 5674 -509 * 6001 100 6 1 chr10 33686624 33687473 -106629292 + L1PA13 LINE L1 5310 6162 -1 2000 189 0 13 chr10 33687469 33687850 -106628915 + L1MB3 LINE L1 5661 6036 -147 * 3226 121 22 39 chr10 33687849 33688912 -106627853 + L1PA16 LINE L1 4953 6157 -9 687 181 25 38 chr10 33688923 33689083 -106627682 + L1MB3 LINE L1 6018 6175 -8 2375 83 0 3 chr10 33689095 33689407 -106627358 - AluY SINE Alu 0 311 1 1131 239 111 17 chr10 33690248 33690545 -106626220 + MER69B DNA AcHobo 1 325 -901 1580 204 74 54 chr10 33690573 33691116 -106625649 + MER69B DNA AcHobo 478 1098 -128 261 0 0 0 chr10 33691116 33691145 -106625620 + (TTG)n Simple_repeat Simple_repeat 2 30 0 762 176 0 0 chr10 33691147 33691272 -106625493 - FRAM SINE Alu -30 146 22 657 181 0 0 chr10 33691276 33691403 -106625362 + MER69B DNA AcHobo 1098 1224 -2 432 0 0 0 chr10 33692081 33692129 -106624636 + (TG)n Simple_repeat Simple_repeat 1 48 0 225 0 0 0 chr10 33692128 33692153 -106624612 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 183 211 96 0 chr10 33693003 33693055 -106623710 - MIR SINE MIR -122 140 84 210 206 98 76 chr10 33693113 33693205 -106623560 + MIR SINE MIR 124 217 -45 2145 240 246 19 chr10 33693327 33693744 -106623021 + L2 LINE L2 1747 2068 -1246 12196 44 3 3 chr10 33693744 33696029 -106620736 - L1PA5 LINE L1 0 6154 3874 2145 240 246 19 chr10 33696029 33696549 -106620216 + L2 LINE L2 2068 2897 -417 587 289 114 0 chr10 33696582 33696810 -106619955 + L2 LINE L2 3017 3270 -43 34 55 0 0 chr10 33697264 33697319 -106619446 + AT_rich Low_complexity Low_complexity 1 55 0 270 164 0 0 chr10 33697415 33697470 -106619295 + (TATG)n Simple_repeat Simple_repeat 2 56 0 1500 184 7 31 chr10 33697471 33697765 -106619000 - AluJo SINE Alu -25 287 1 588 276 71 20 chr10 33699664 33699860 -106616905 - MIR SINE MIR -51 211 6 671 318 181 12 chr10 33700373 33700897 -106615868 + L2 LINE L2 2551 3212 -101 1818 206 101 15 chr10 33700897 33701362 -106615403 - MLT1D LTR MaLR 0 505 1 671 318 181 12 chr10 33701362 33701484 -106615281 + L2 LINE L2 3212 3312 -1 242 326 92 0 chr10 33701884 33701982 -106614783 - MIR3 SINE MIR -53 155 49 298 250 54 22 chr10 33701992 33702084 -106614681 + MIR SINE MIR 152 246 -16 5563 189 99 9 chr10 33702388 33703666 -106613099 + Charlie1a DNA MER1_type 61 1452 -3 1836 160 0 7 chr10 33703727 33704008 -106612757 - AluJb SINE Alu -28 284 6 646 164 75 25 chr10 33704013 33704172 -106612593 - MER3 DNA MER1_type -42 167 1 23 33 0 0 chr10 33704771 33704801 -106611964 + AT_rich Low_complexity Low_complexity 1 30 0 281 29 0 200 chr10 33704938 33705008 -106611757 + U2 snRNA snRNA 1 56 -132 224 247 111 0 chr10 33705920 33706001 -106610764 + MIR SINE MIR 124 213 -49 2437 84 10 0 chr10 33706279 33706587 -106610178 + AluSq SINE Alu 1 311 -2 7417 183 28 13 chr10 33706593 33706626 -106610139 + L1PBa LINE L1 2420 2451 -4411 1835 88 78 3 chr10 33706626 33706910 -106609855 - L1PA13 LINE L1 0 6163 5859 7417 183 28 13 chr10 33706910 33708439 -106608326 + L1PBa LINE L1 2451 4063 -2799 2448 50 0 23 chr10 33708448 33708750 -106608015 - AluY SINE Alu -16 295 1 272 315 14 0 chr10 33709060 33709133 -106607632 - MIR SINE MIR -184 78 5 244 316 69 46 chr10 33710156 33710330 -106606435 - MIR SINE MIR -78 184 7 181 98 49 0 chr10 33712281 33712322 -106604443 + A-rich Low_complexity Low_complexity 4 46 0 246 105 0 0 chr10 33713240 33713278 -106603487 + (TA)n Simple_repeat Simple_repeat 1 38 0 2182 163 11 3 chr10 33713278 33713647 -106603118 + L1PA16 LINE L1 5784 6155 -11 301 348 163 0 chr10 33714418 33714553 -106602212 - L2 LINE L2 0 3272 3116 2166 189 138 22 chr10 33715541 33716127 -106600638 + MLT1E1 LTR MaLR 1 654 0 330 276 126 24 chr10 33716429 33716556 -106600209 + L2 LINE L2 3133 3272 0 348 316 51 63 chr10 33716788 33717025 -106599740 + L2 LINE L2 2619 2852 -462 264 232 0 0 chr10 33717222 33717278 -106599487 + L2 LINE L2 3182 3237 -76 1189 139 102 5 chr10 33717304 33717519 -106599246 - MER46A DNA MER2_type 0 236 1 371 370 95 38 chr10 33718269 33718531 -106598234 + L2 LINE L2 2995 3271 -1 30 0 0 0 chr10 33720776 33720806 -106595959 + AT_rich Low_complexity Low_complexity 1 30 0 231 250 0 0 chr10 33720964 33721012 -106595753 + (CAG)n Simple_repeat Simple_repeat 2 49 0 441 296 78 0 chr10 33722093 33722235 -106594530 - MIR SINE MIR -27 235 83 3181 57 2 0 chr10 33723655 33724057 -106592708 + L1PA5 LINE L1 5749 6151 -3 2143 100 11 48 chr10 33724573 33724664 -106592101 - L1P LINE L1 -3084 3062 2969 2632 14 0 3 chr10 33724664 33724958 -106591807 - AluYb8 SINE Alu -11 307 15 2143 100 11 48 chr10 33724958 33725237 -106591528 - L1P LINE L1 -3177 2969 2706 12093 91 14 1 chr10 33725237 33726956 -106589809 + L1PA7 LINE L1 3062 4802 -1344 * 12972 21 0 0 chr10 33726955 33728692 -106588073 - L1PA3 LINE L1 -543 5612 3876 4593 19 0 0 chr10 33728692 33729238 -106587527 + L1PA3 LINE L1 5617 6166 0 6805 50 25 6 chr10 33729257 33730612 -106586153 + L1PA7 LINE L1 4784 6153 -1 720 219 129 0 chr10 33731255 33731410 -106585355 - MER45A DNA AcHobo 0 178 4 451 320 50 58 chr10 33733029 33733265 -106583500 - MIR SINE MIR -26 236 7 395 301 35 18 chr10 33733695 33733808 -106582957 - MIR3 SINE MIR -21 187 73 402 21 0 0 chr10 33734183 33734230 -106582535 + (CAA)n Simple_repeat Simple_repeat 2 48 0 21 0 0 0 chr10 33734433 33734454 -106582311 + AT_rich Low_complexity Low_complexity 1 21 0 295 301 38 21 chr10 33735178 33735364 -106581401 + L1ME LINE L1 5631 5819 -302 22 0 0 0 chr10 33735499 33735521 -106581244 + AT_rich Low_complexity Low_complexity 1 22 0 235 152 22 0 chr10 33735629 33735675 -106581090 + L1MD3 LINE L1 7927 7973 -22 2612 258 145 40 chr10 33736038 33737027 -106579738 - L2 LINE L2 0 3313 2098 2048 122 0 13 chr10 33737027 33737330 -106579435 + AluSx SINE Alu 1 299 -13 2612 258 145 40 chr10 33737330 33737886 -106578879 - L2 LINE L2 -1215 2098 1602 23 0 0 0 chr10 33737978 33738001 -106578764 + AT_rich Low_complexity Low_complexity 1 23 0 738 182 29 115 chr10 33738505 33738714 -106578051 - MER58C DNA MER1_type -24 191 1 281 0 0 0 chr10 33739087 33739166 -106577599 + L1PA5 LINE L1 6105 6179 0 1006 92 14 0 chr10 33739176 33739318 -106577447 + AluSg/x SINE Alu 166 309 0 286 323 129 8 chr10 33741282 33741530 -106575235 + L2 LINE L2 2377 2654 -660 919 250 98 40 chr10 33741563 33741939 -106574826 + L1ME3A LINE L1 5773 6170 0 200 209 93 0 chr10 33742283 33742326 -106574439 + L2 LINE L2 3164 3210 -62 245 181 24 24 chr10 33743170 33743183 -106573582 + (TA)n Simple_repeat Simple_repeat 2 14 -70 1817 156 0 13 chr10 33743183 33743484 -106573281 + AluJb SINE Alu 1 297 -15 245 181 24 24 chr10 33743484 33743553 -106573212 + (TA)n Simple_repeat Simple_repeat 13 84 0 414 0 0 0 chr10 33745044 33745090 -106571675 + (CA)n Simple_repeat Simple_repeat 1 46 0 710 183 30 71 chr10 33746085 33746282 -106570483 - MER53 DNA DNA 0 189 1 1241 168 102 0 chr10 33746364 33746638 -106570127 + MER33 DNA MER1_type 1 302 -22 21 0 0 0 chr10 33749664 33749685 -106567080 + AT_rich Low_complexity Low_complexity 1 21 0 367 246 9 61 chr10 33749708 33749822 -106566943 + L2 LINE L2 3187 3294 -19 27 73 0 0 chr10 33749920 33749975 -106566790 + AT_rich Low_complexity Low_complexity 1 55 0 25 0 0 0 chr10 33750105 33750130 -106566635 + AT_rich Low_complexity Low_complexity 1 25 0 2315 109 0 3 chr10 33750496 33750807 -106565958 + AluSg SINE Alu 1 310 0 193 255 21 0 chr10 33751746 33751793 -106564972 - MER5C DNA MER1_type 0 324 277 225 298 105 18 chr10 33751927 33752041 -106564724 - MER5C DNA MER1_type -200 124 1 1939 155 0 7 chr10 33752052 33752355 -106564410 + AluSx SINE Alu 7 307 -5 835 249 30 0 chr10 33752516 33752717 -106564048 + MER3 DNA MER1_type 1 207 -2 921 205 45 0 chr10 33752934 33753134 -106563631 - MER3 DNA MER1_type 0 209 1 24 32 0 0 chr10 33753210 33753241 -106563524 + AT_rich Low_complexity Low_complexity 1 31 0 2145 118 13 0 chr10 33754286 33754592 -106562173 - AluSx SINE Alu -2 310 1 320 208 32 80 chr10 33755012 33755137 -106561628 - L1M4 LINE L1 -1844 4302 4184 327 307 12 48 chr10 33755610 33755776 -106560989 + L1MC5 LINE L1 7059 7218 -743 225 308 120 30 chr10 33755806 33755939 -106560826 + L1MC4 LINE L1 7324 7468 -574 546 236 94 112 chr10 33755958 33756585 -106560180 + L1MC5 LINE L1 7297 7912 -49 22 35 0 0 chr10 33756774 33756803 -106559962 + AT_rich Low_complexity Low_complexity 1 29 0 216 97 0 0 chr10 33756840 33756871 -106559894 + (TA)n Simple_repeat Simple_repeat 2 32 0 182 79 0 53 chr10 33756876 33756914 -106559851 + (CAGAGA)n Simple_repeat Simple_repeat 6 41 0 30 0 0 0 chr10 33757746 33757776 -106558989 + AT_rich Low_complexity Low_complexity 1 30 0 277 136 55 18 chr10 33758206 33758316 -106558449 + (TA)n Simple_repeat Simple_repeat 2 115 0 780 304 55 0 chr10 33759529 33759746 -106557019 - MIR SINE MIR -22 240 12 191 367 0 0 chr10 33760150 33760210 -106556555 + L2 LINE L2 3213 3272 0 219 232 196 0 chr10 33760450 33760506 -106556259 - L3 LINE CR1 -155 1422 1356 465 19 0 0 chr10 33761229 33761283 -106555482 + (TG)n Simple_repeat Simple_repeat 1 54 0 266 295 53 42 chr10 33761786 33761881 -106554884 + L2 LINE L2 3147 3242 -30 21 0 0 0 chr10 33762993 33763014 -106553751 + AT_rich Low_complexity Low_complexity 1 21 0 225 0 0 0 chr10 33763108 33763133 -106553632 + (CA)n Simple_repeat Simple_repeat 2 26 0 640 169 8 8 chr10 33765308 33765432 -106551333 + FLAM_C SINE Alu 1 124 -19 300 274 19 66 chr10 33765471 33765577 -106551188 - MIR SINE MIR -66 142 42 602 85 0 0 chr10 33765916 33765998 -106550767 - AluY SINE Alu -229 82 1 5419 167 28 11 chr10 33766180 33767237 -106549528 + L1MA7 LINE L1 5214 6288 -3 22 35 0 0 chr10 33767587 33767616 -106549149 + AT_rich Low_complexity Low_complexity 1 29 0 22 80 0 0 chr10 33767736 33767786 -106548979 + AT_rich Low_complexity Low_complexity 1 50 0 804 149 99 99 chr10 33767786 33767874 -106548891 - MER2 DNA MER2_type -143 202 115 1788 157 0 7 chr10 33767874 33768176 -106548589 + AluJb SINE Alu 5 304 0 804 149 99 99 chr10 33768176 33768287 -106548478 - MER2 DNA MER2_type -229 116 2 268 214 0 60 chr10 33768289 33768373 -106548392 + L1MC4 LINE L1 6624 6702 -1340 535 259 38 25 chr10 33768713 33768871 -106547894 + MIR SINE MIR 85 244 -18 234 244 0 0 chr10 33768884 33768929 -106547836 + (CACCAT)n Simple_repeat Simple_repeat 2 46 0 226 284 0 54 chr10 33768930 33769004 -106547761 - MER5A DNA MER1_type -26 163 94 195 372 122 11 chr10 33769518 33769698 -106547067 - L2 LINE L2 -181 3091 2892 744 164 0 22 chr10 33769872 33770006 -106546759 + FLAM_C SINE Alu 1 131 -2 22 0 0 0 chr10 33770421 33770443 -106546322 + AT_rich Low_complexity Low_complexity 1 22 0 341 250 0 0 chr10 33770864 33770944 -106545821 + L1M1 LINE L1 3539 3618 -3947 196 297 14 0 chr10 33771541 33771615 -106545150 + MIR SINE MIR 21 95 -167 206 250 0 0 chr10 33773091 33773131 -106543634 - L2 LINE L2 -21 3251 3212 2978 184 64 14 chr10 33773161 33773804 -106542961 + L1MA7 LINE L1 5617 6291 0 443 267 66 36 chr10 33773869 33774172 -106542593 + L1MC1 LINE L1 1192 1503 -4913 1774 149 32 36 chr10 33774187 33774495 -106542270 + AluJo SINE Alu 1 307 -5 220 358 88 10 chr10 33774502 33774706 -106542059 - L2 LINE L2 -1153 2161 1942 236 323 200 8 chr10 33774706 33774836 -106541929 - L2 LINE L2 -7 3265 3111 30854 94 8 28 chr10 33775055 33780719 -106536046 - L1PA7 LINE L1 -4 6465 902 11267 204 42 26 chr10 33781066 33781719 -106535046 + L1MC1 LINE L1 1985 2626 -3987 2091 108 0 7 chr10 33781719 33782005 -106534760 + AluSg SINE Alu 1 284 -26 11267 204 42 26 chr10 33782005 33782465 -106534300 + L1MC1 LINE L1 2626 3077 -3536 1514 196 7 21 chr10 33782465 33782751 -106534014 + AluJo SINE Alu 1 282 -30 11267 204 42 26 chr10 33782751 33786137 -106530628 + L1MC1 LINE L1 3077 6588 -25 381 285 96 16 chr10 33786191 33786514 -106530251 + L1M4 LINE L1 4259 4607 -1539 1727 177 87 9 chr10 33786659 33787023 -106529742 - MER82 DNA MER2_type -28 625 203 6106 142 49 3 chr10 33787569 33788540 -106528225 + Tigger1 DNA MER2_type 2 1017 -1401 323 155 309 0 chr10 33788553 33788650 -106528115 + L1ME1 LINE L1 5838 5964 -202 203 156 0 0 chr10 33788650 33788682 -106528083 + (CA)n Simple_repeat Simple_repeat 1 32 0 738 34 0 0 chr10 33788905 33788994 -106527771 + (GAAA)n Simple_repeat Simple_repeat 2 90 0 243 0 0 0 chr10 33788994 33789021 -106527744 + (GGGA)n Simple_repeat Simple_repeat 1 27 0 985 99 12 12 chr10 33789021 33789182 -106527583 + (GAAA)n Simple_repeat Simple_repeat 4 164 0 1628 175 72 52 chr10 33789405 33789793 -106526972 + MSTD LTR MaLR 1 396 0 2246 106 53 34 chr10 33792598 33792955 -106523810 + THE1B LTR MaLR 1 364 0 1368 162 3 125 chr10 33793243 33793570 -106523195 - AluJo SINE Alu -25 287 1 2517 64 0 3 chr10 33793579 33793875 -106522890 - AluSp SINE Alu -18 295 1 1584 181 23 0 chr10 33793898 33794157 -106522608 - AluJo SINE Alu -37 275 11 282 304 54 9 chr10 33795387 33795499 -106521266 - L2 LINE L2 -3 3269 3153 2260 101 14 3 chr10 33797917 33798214 -106518551 - AluSp SINE Alu -13 300 1 666 292 130 24 chr10 33798468 33798838 -106517927 + MLT1J LTR MaLR 103 511 0 5551 90 11 60 chr10 33799209 33800077 -106516688 - LTR12 LTR ERV1 0 826 1 2228 105 0 0 chr10 33800904 33801189 -106515576 - AluSc SINE Alu -21 288 4 2098 120 0 29 chr10 33801588 33801897 -106514868 + AluSx SINE Alu 1 300 -12 2353 164 31 14 chr10 33802181 33802601 -106514164 - L1MB3 LINE L1 -298 6383 5957 1910 218 62 28 chr10 33802599 33803134 -106513631 - L1MB3 LINE L1 -2586 4058 3494 * 2199 141 0 0 chr10 33803134 33803432 -106513333 + AluSx SINE Alu 1 298 -14 1910 218 62 28 chr10 33803432 33803569 -106513196 - L1MB3 LINE L1 -3150 3494 3363 277 257 46 10 chr10 33803573 33803720 -106513045 + L1MA8 LINE L1 6083 6236 -76 2934 205 18 28 chr10 33803721 33804461 -106512304 - L1MB3 LINE L1 -4951 1695 964 240 163 0 0 chr10 33804533 33804576 -106512189 + CT-rich Low_complexity Low_complexity 1 43 0 377 267 37 7 chr10 33804623 33804758 -106512007 - L1MB3 LINE L1 -5587 955 817 267 257 14 14 chr10 33804806 33804876 -106511889 - L1M3d LINE L1 -5117 1448 1379 * 368 324 14 7 chr10 33804873 33805015 -106511750 - L1M3d LINE L1 -5700 946 804 239 263 58 100 chr10 33805317 33805576 -106511189 - L1M3d LINE L1 -6293 249 2 264 263 0 0 chr10 33805668 33805725 -106511040 - L2 LINE L2 -8 3305 3249 199 250 0 0 chr10 33805773 33805825 -106510940 - L2 LINE L2 0 3313 3262 432 323 115 27 chr10 33806135 33806723 -106510042 - L2 LINE L2 -221 3051 2403 1093 243 59 50 chr10 33806792 33807133 -106509632 + LTR16A1 LTR ERVL 114 457 0 1199 202 71 32 chr10 33807324 33807593 -106509172 + AluJo SINE Alu 2 284 -18 723 104 0 0 chr10 33807593 33807699 -106509066 + (GGGGA)n Simple_repeat Simple_repeat 3 108 0 1199 202 71 32 chr10 33807699 33807711 -106509054 + AluJo SINE Alu 284 294 -8 1453 316 93 30 chr10 33807875 33809200 -106507565 + HERV16 LTR ERVL 579 2120 -3035 1397 216 5 81 chr10 33809223 33809616 -106507149 - MLT2B1 LTR ERVL -157 363 1 193 189 0 0 chr10 33809616 33809653 -106507112 - MIR SINE MIR -173 89 53 340 294 131 32 chr10 33809697 33809949 -106506816 - L2 LINE L2 -1051 2263 1987 1581 125 0 142 chr10 33810633 33810970 -106505795 + AluJo SINE Alu 1 289 -13 2286 168 58 5 chr10 33811133 33811531 -106505234 + MSTB LTR MaLR 8 426 0 276 258 180 16 chr10 33811537 33811665 -106505100 - MIR SINE MIR -112 150 2 347 287 7 15 chr10 33811730 33811866 -106504899 - L2 LINE L2 -1265 2049 1915 763 245 31 0 chr10 33812495 33812654 -106504111 - FRAM SINE Alu -2 164 1 1897 97 0 8 chr10 33812707 33812954 -106503811 - AluSx SINE Alu -15 297 53 239 271 227 30 chr10 33813917 33814120 -106502645 + L1ME LINE L1 5582 5824 -297 2345 81 40 0 chr10 33814125 33814423 -106502342 + AluSp SINE Alu 1 310 -3 360 195 53 80 chr10 33814465 33814615 -106502150 + HAL1b LINE L1 1193 1308 -40 184 360 47 12 chr10 33816985 33817071 -106499694 - L2 LINE L2 -15 3257 3169 272 48 24 0 chr10 33818775 33818817 -106497948 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 195 292 105 48 chr10 33819090 33819299 -106497466 + L2 LINE L2 1796 2016 -1298 2280 96 0 7 chr10 33820054 33820347 -106496418 - AluSg SINE Alu -19 291 1 237 108 0 0 chr10 33820519 33820556 -106496209 + (GA)n Simple_repeat Simple_repeat 2 38 0 22 35 0 0 chr10 33820658 33820687 -106496078 + AT_rich Low_complexity Low_complexity 1 29 0 6719 101 31 18 chr10 33820772 33821951 -106494814 - L1MA4A LINE L1 -3 6300 5105 237 278 0 0 chr10 33822620 33822674 -106494091 + L3 LINE CR1 1509 1562 -15 235 361 45 15 chr10 33822775 33822908 -106493857 - L3b LINE CR1 -140 1443 1307 1533 151 0 0 chr10 33822941 33823180 -106493585 - Tigger5 DNA MER2_type 0 2323 2085 1258 169 14 24 chr10 33823170 33823383 -106493382 - Tigger5 DNA MER2_type -2085 238 28 * 221 116 0 23 chr10 33824158 33824201 -106492564 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 226 287 183 9 chr10 33825403 33825518 -106491247 - MIR SINE MIR -19 243 109 228 67 0 0 chr10 33825568 33825598 -106491167 + (CTG)n Simple_repeat Simple_repeat 1 30 0 192 179 0 0 chr10 33825802 33825841 -106490924 + CT-rich Low_complexity Low_complexity 1 39 0 238 174 43 0 chr10 33825919 33825965 -106490800 - L2 LINE L2 -88 3184 3137 809 178 70 76 chr10 33826132 33826317 -106490448 + MER20 DNA MER1_type 36 219 0 311 316 26 0 chr10 33826528 33826642 -106490123 + MIR SINE MIR 30 146 -62 291 153 77 135 chr10 33826772 33826942 -106489823 - L1ME4a LINE L1 -11 6110 5951 3329 143 151 22 chr10 33827239 33827923 -106488842 - LTR48 LTR ERV1 0 787 16 745 149 65 39 chr10 33827992 33828146 -106488619 - LTR48 LTR ERV1 -31 756 599 638 241 76 2 chr10 33828231 33828391 -106488374 + L1PA16 LINE L1 5997 6163 -2 211 253 12 36 chr10 33829308 33829391 -106487374 + GA-rich Low_complexity Low_complexity 3 83 0 324 0 0 0 chr10 33829964 33830000 -106486765 + (TG)n Simple_repeat Simple_repeat 2 37 0 939 235 15 0 chr10 33832238 33832442 -106484323 - MIR SINE MIR -41 221 15 2118 156 51 13 chr10 33833986 33834418 -106482347 + MER61C LTR ERV1 1 433 -1 262 246 27 48 chr10 33834576 33834626 -106482139 + MIR SINE MIR 114 164 -98 1919 119 0 0 chr10 33834626 33834895 -106481870 + AluSx SINE Alu 38 306 -6 262 246 27 48 chr10 33834895 33834960 -106481805 + MIR SINE MIR 164 225 -37 295 265 113 13 chr10 33835114 33835265 -106481500 + L1ME4a LINE L1 5909 6074 -47 197 373 114 25 chr10 33835848 33836006 -106480759 + L3b LINE CR1 1403 1574 -9 286 265 0 15 chr10 33836334 33836402 -106480363 - MLT1L LTR MaLR -221 394 328 * 413 292 72 15 chr10 33836388 33836583 -106480182 - MLT1L LTR MaLR -394 221 16 605 287 113 27 chr10 33836624 33836952 -106479813 + HAL1 LINE L1 1515 1870 -637 298 295 30 42 chr10 33837403 33837569 -106479196 + HAL1b LINE L1 743 906 -442 1153 210 61 91 chr10 33837660 33838155 -106478610 + L1MC5 LINE L1 6693 7172 -789 465 200 48 0 chr10 33838164 33838269 -106478496 - L1MA4A LINE L1 -5 6298 6189 2148 158 2 50 chr10 33838269 33838667 -106478098 - L1PB4 LINE L1 -98 6058 5680 1341 241 86 33 chr10 33838665 33839155 -106477610 + L1MC5 LINE L1 7175 7690 -271 * 2359 87 0 3 chr10 33839206 33839506 -106477259 - AluSp SINE Alu -14 299 1 822 220 37 18 chr10 33840823 33841041 -106475724 + L1MC5 LINE L1 7705 7926 -35 2246 126 36 8 chr10 33841380 33841738 -106475027 - L1MB4 LINE L1 0 6180 5813 5477 175 9 9 chr10 33841739 33842953 -106473812 - L1MB3 LINE L1 -8 6175 4958 308 293 204 7 chr10 33843787 33843934 -106472831 - MIR SINE MIR -71 191 16 2218 124 58 28 chr10 33844257 33844621 -106472144 - THE1C LTR MaLR 0 375 1 1253 171 82 4 chr10 33844623 33844868 -106471897 - MER74A LTR ERVL -294 264 1 360 277 61 40 chr10 33844900 33845048 -106471717 - MIR SINE MIR -71 191 41 16129 129 24 7 chr10 33845724 33848100 -106468665 + Tigger1 DNA MER2_type 1 2417 -1 233 351 0 21 chr10 33848438 33848532 -106468233 - MIR3 SINE MIR -27 181 90 252 188 0 0 chr10 33848578 33848642 -106468123 + (CA)n Simple_repeat Simple_repeat 1 64 0 1085 189 98 80 chr10 33848699 33848985 -106467780 - MLT2B1 LTR ERVL 0 520 230 14497 201 64 18 chr10 33850414 33852277 -106464488 - L1MA5 LINE L1 -7 6995 5219 2373 97 0 0 chr10 33852277 33852577 -106464188 - AluSc SINE Alu -9 300 1 14497 201 64 18 chr10 33852577 33857317 -106459448 - L1MA5 LINE L1 -1783 5219 68 1214 115 6 0 chr10 33857563 33857737 -106459028 - L1MA6 LINE L1 -316 5984 5810 718 101 9 28 chr10 33857737 33857842 -106458923 + L1MA6 LINE L1 6189 6295 -5 7254 132 18 0 chr10 33858004 33859148 -106457617 - L1PA8A LINE L1 -2068 4078 2915 9811 110 1 39 chr10 33859148 33861258 -106455507 + L1PA8A LINE L1 4051 6129 -2 376 324 159 18 chr10 33861304 33861390 -106455375 + L1ME LINE L1 748 821 -5298 2241 105 0 0 chr10 33861390 33861686 -106455079 + AluSq SINE Alu 1 296 -17 376 324 159 18 chr10 33861686 33862046 -106454719 + L1ME LINE L1 821 1257 -4862 3410 259 82 24 chr10 33862104 33863363 -106453402 + L1ME LINE L1 3780 5149 -996 186 103 0 0 chr10 33863363 33863392 -106453373 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 3410 259 82 24 chr10 33863392 33863711 -106453054 + L1ME LINE L1 5149 5448 -697 569 273 104 18 chr10 33863719 33863883 -106452882 + L1ME3 LINE L1 3209 3357 -2789 2189 86 0 0 chr10 33863883 33864152 -106452613 + AluSx SINE Alu 28 296 -16 569 273 104 18 chr10 33864152 33864313 -106452452 + L1ME3 LINE L1 3357 3562 -2584 313 257 144 81 chr10 33864862 33865084 -106451681 + HAL1 LINE L1 2266 2501 -6 23 0 0 0 chr10 33865546 33865569 -106451196 + AT_rich Low_complexity Low_complexity 1 23 0 410 308 57 19 chr10 33865601 33865812 -106450953 + L1ME3 LINE L1 5473 5691 -430 262 242 129 30 chr10 33865877 33866009 -106450756 - L2 LINE L2 0 3313 3169 389 215 118 15 chr10 33866047 33866182 -106450583 + L1ME4a LINE L1 5969 6117 -4 232 223 155 19 chr10 33866184 33866287 -106450478 + MIR SINE MIR 140 256 -6 1935 105 8 0 chr10 33867774 33868040 -106448725 - AluSp SINE Alu -5 308 41 996 235 15 15 chr10 33868141 33868401 -106448364 + L1ME3 LINE L1 5711 5970 -192 338 278 26 26 chr10 33868416 33868567 -106448198 - HAL1 LINE L1 -981 1526 1376 * 478 262 106 39 chr10 33868547 33868686 -106448079 - L1MEd LINE L1 -4862 1257 1129 2375 90 0 3 chr10 33868686 33868986 -106447779 - AluSq SINE Alu -14 299 1 478 262 106 39 chr10 33868986 33869417 -106447348 - L1MEd LINE L1 -4990 1129 561 824 150 8 0 chr10 33869417 33869544 -106447221 - FLAM_C SINE Alu -2 141 14 270 282 32 26 chr10 33869931 33870087 -106446678 - L1MEd LINE L1 -5961 158 2 297 206 68 0 chr10 33871587 33871660 -106445105 - MIR SINE MIR -82 180 103 1921 139 0 20 chr10 33871696 33871997 -106444768 + AluJo SINE Alu 1 295 -17 309 244 47 23 chr10 33872008 33872094 -106444671 - L3 LINE CR1 -56 1521 1434 287 235 15 0 chr10 33874312 33874380 -106442385 - Charlie8 DNA MER1_type -1000 1417 1349 188 345 35 53 chr10 33875612 33875725 -106441040 + MIR SINE MIR 72 182 -80 2473 202 51 40 chr10 33876312 33876915 -106439850 + L1MC4 LINE L1 6771 7380 -662 819 297 158 4 chr10 33876916 33877402 -106439363 + L2 LINE L2 2485 3049 -264 1919 99 26 0 chr10 33877425 33877697 -106439068 - L1MA9 LINE L1 -566 5746 5468 * 2312 172 25 40 chr10 33877690 33878213 -106438552 + L1MA9 LINE L1 5767 6281 -31 253 182 0 55 chr10 33878398 33878453 -106438312 + L2 LINE L2 3262 3313 0 502 250 89 5 chr10 33878911 33879135 -106437630 - LTR16C LTR ERVL 0 491 249 2680 186 9 28 chr10 33881057 33881388 -106435377 - L1PB4 LINE L1 -4 6152 5833 2239 109 23 0 chr10 33881388 33881690 -106435075 - AluSc SINE Alu 0 309 1 2680 186 9 28 chr10 33881690 33881897 -106434868 - L1PB4 LINE L1 -323 5833 5624 24 32 0 0 chr10 33881928 33881959 -106434806 + AT_rich Low_complexity Low_complexity 1 31 0 1775 141 0 0 chr10 33882019 33882296 -106434469 - L1PB4 LINE L1 -577 5579 5303 323 279 54 0 chr10 33882534 33882645 -106434120 - MIR SINE MIR -77 185 69 221 286 31 41 chr10 33882815 33882913 -106433852 - MIR SINE MIR -33 229 133 1834 180 0 7 chr10 33883145 33883445 -106433320 + AluJo SINE Alu 3 300 -12 180 0 0 0 chr10 33883483 33883503 -106433262 + (T)n Simple_repeat Simple_repeat 1 20 0 2883 130 2 65 chr10 33883859 33884383 -106432382 - L1PB1 LINE L1 -3 6148 5658 2369 123 88 20 chr10 33884671 33885068 -106431697 + MSTB LTR MaLR 3 426 0 321 250 174 14 chr10 33885136 33885280 -106431485 - MIR SINE MIR -36 226 60 378 246 103 32 chr10 33886880 33887006 -106429759 - L2 LINE L2 -1 3312 3178 383 235 49 12 chr10 33887006 33887141 -106429624 + (TA)n Simple_repeat Simple_repeat 1 144 -24 1860 195 14 3 chr10 33887141 33887485 -106429280 - MER7A DNA MER2_type 0 346 1 383 235 49 12 chr10 33887485 33887511 -106429254 + (TA)n Simple_repeat Simple_repeat 144 168 0 831 263 67 43 chr10 33887515 33888073 -106428692 - L2 LINE L2 -149 3164 2597 2775 277 106 26 chr10 33888073 33889108 -106427657 - L2 LINE L2 -1339 1975 816 1793 188 50 72 chr10 33889108 33889624 -106427141 - MLT1D LTR MaLR 0 505 1 2775 277 106 26 chr10 33889624 33889868 -106426897 - L2 LINE L2 -2498 816 593 2809 133 0 22 chr10 33890506 33890950 -106425815 - Tigger2a DNA MER2_type 0 434 1 1097 228 150 0 chr10 33892157 33892531 -106424234 + MER63B DNA MER1_type 1 434 0 738 127 0 17 chr10 33892641 33892759 -106424006 - AluJo SINE Alu -15 297 182 832 174 7 7 chr10 33892759 33892897 -106423868 - AluJo SINE Alu -165 147 10 838 264 103 29 chr10 33893234 33893718 -106423047 + L1MC/D LINE L1 5255 5774 -2034 309 26 0 0 chr10 33893825 33893863 -106422902 + (TTG)n Simple_repeat Simple_repeat 1 38 0 2303 68 0 4 chr10 33893864 33894142 -106422623 - AluSc SINE Alu -32 277 1 1302 226 133 11 chr10 33894405 33894759 -106422006 - LTR16C LTR ERVL -2 489 93 287 258 21 102 chr10 33894878 33895064 -106421701 + L1MC/D LINE L1 5616 5786 -2022 322 311 41 0 chr10 33895377 33895499 -106421266 + MIR SINE MIR 134 260 -2 1588 147 20 8 chr10 33895644 33895895 -106420870 - AluJo SINE Alu -34 278 25 295 239 263 32 chr10 33895900 33896151 -106420614 - L2 LINE L2 -3 3310 3002 336 132 0 0 chr10 33896657 33896710 -106420055 + MSTC LTR MaLR 1 53 -375 850 117 131 0 chr10 33896711 33896856 -106419909 + MSTC LTR MaLR 202 365 -63 1791 186 3 3 chr10 33896858 33897154 -106419611 + AluJo SINE Alu 3 298 -14 315 71 0 0 chr10 33897154 33897196 -106419569 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 482 154 0 0 chr10 33897196 33897274 -106419491 + MSTC LTR MaLR 351 428 0 195 180 0 98 chr10 33897285 33897346 -106419419 + L2 LINE L2 2992 3046 -226 530 115 13 0 chr10 33898500 33898578 -106418187 + AluJb SINE Alu 179 257 -55 403 203 9 53 chr10 33899227 33899358 -106417407 + L1PA10 LINE L1 5732 5837 -331 2776 85 21 94 chr10 33899696 33900177 -106416588 + L1PA11 LINE L1 5729 6174 0 207 0 0 0 chr10 33901526 33901549 -106415216 + (TC)n Simple_repeat Simple_repeat 2 24 0 296 323 0 20 chr10 33903846 33903945 -106412820 + MIR SINE MIR 52 148 -60 254 294 24 12 chr10 33903957 33904042 -106412723 + MER5A DNA MER1_type 57 142 -47 234 220 0 0 chr10 33904256 33904306 -106412459 - Charlie7 DNA MER1_type -31 2581 2532 21 57 0 0 chr10 33904366 33904401 -106412364 + AT_rich Low_complexity Low_complexity 1 35 0 3475 243 109 58 chr10 33904422 33904557 -106412208 - Charlie7 DNA MER1_type -255 2357 2230 1593 148 72 34 chr10 33904557 33904848 -106411917 - AluJb SINE Alu -10 302 1 3475 243 109 58 chr10 33904848 33905721 -106411044 - Charlie7 DNA MER1_type -382 2230 1228 2611 57 0 0 chr10 33905721 33906022 -106410743 - AluY SINE Alu -10 301 1 3475 243 109 58 chr10 33906022 33906693 -106410072 - Charlie7 DNA MER1_type -1384 1228 592 1372 177 16 0 chr10 33906694 33906942 -106409823 - L1MD3 LINE L1 -5 7990 7739 2112 108 0 17 chr10 33906992 33907289 -106409476 + AluSc SINE Alu 1 292 -17 1772 167 10 3 chr10 33907294 33907587 -106409178 + AluSx SINE Alu 1 295 -17 247 183 108 97 chr10 33907743 33907836 -106408929 - Charlie7 DNA MER1_type -2412 200 107 2268 120 3 0 chr10 33908384 33908693 -106408072 + AluSx SINE Alu 2 311 -1 1398 251 78 10 chr10 33908763 33909146 -106407619 + LTR16A LTR ERVL 29 437 -13 273 57 0 0 chr10 33909240 33909275 -106407490 + (TG)n Simple_repeat Simple_repeat 2 36 0 2289 90 0 0 chr10 33909531 33909837 -106406928 - AluSc SINE Alu 0 309 4 538 254 53 74 chr10 33909843 33909945 -106406820 - MIR SINE MIR -11 251 148 2245 122 0 0 chr10 33909945 33910241 -106406524 - AluSg SINE Alu -14 296 1 538 254 53 74 chr10 33910241 33910382 -106406383 - MIR SINE MIR -114 148 13 283 311 10 0 chr10 33910408 33910511 -106406254 - L1MC/D LINE L1 -2036 5772 5669 1677 179 0 27 chr10 33912661 33912957 -106403808 + AluJo SINE Alu 1 288 -24 325 320 16 24 chr10 33913517 33913642 -106403123 - L2 LINE L2 -9 3304 3181 1425 209 39 26 chr10 33913700 33914007 -106402758 - MLT2C1 LTR ERVL -53 344 34 3549 236 42 28 chr10 33914012 33914990 -106401775 + L1MEc LINE L1 263 1254 -5142 2987 230 54 68 chr10 33914995 33916179 -106400586 + L1M4 LINE L1 3957 5124 -1022 22 0 0 0 chr10 33916736 33916758 -106400007 + AT_rich Low_complexity Low_complexity 1 22 0 536 249 164 24 chr10 33916918 33917083 -106399682 + MER5A DNA MER1_type 1 188 -1 1039 241 196 6 chr10 33917084 33917416 -106399349 + MLT1L LTR MaLR 148 542 -73 1164 232 47 56 chr10 33918809 33919191 -106397574 + MLT1J2 LTR MaLR 53 440 -6 1479 63 5 44 chr10 33919215 33919382 -106397383 - MER107 DNA MER1_type 0 197 38 2032 143 47 14 chr10 33919382 33919745 -106397020 + THE1C LTR MaLR 1 375 0 1479 63 5 44 chr10 33919745 33919782 -106396983 - MER107 DNA MER1_type -159 38 1 2362 102 3 13 chr10 33920262 33920577 -106396188 - AluSp SINE Alu -1 312 1 718 179 0 24 chr10 33920694 33920817 -106395948 - FLAM_A SINE Alu -9 124 5 3157 183 8 16 chr10 33920949 33921577 -106395188 - L1MB4 LINE L1 -7 6173 5551 2141 117 0 37 chr10 33921579 33921904 -106394861 - AluSq SINE Alu 0 313 1 1419 224 87 61 chr10 33922104 33922528 -106394237 + MER69 DNA AcHobo 1 435 -791 992 245 37 4 chr10 33922557 33922802 -106393963 + MER69 DNA AcHobo 509 761 -465 1197 209 52 41 chr10 33922855 33923218 -106393547 + MER69 DNA AcHobo 2017 2383 -143 1171 174 5 40 chr10 33923218 33923442 -106393323 - AluJb SINE Alu -9 303 88 299 261 56 14 chr10 33923447 33923589 -106393176 + MER69 DNA AcHobo 2375 2522 -4 364 167 17 0 chr10 33923826 33923886 -106392879 + MLT1E2 LTR MaLR 1 61 -565 1312 210 50 55 chr10 33923890 33924233 -106392532 - MLT1A1 LTR MaLR 0 365 25 470 316 61 77 chr10 33924233 33924676 -106392089 + L1M2a LINE L1 6 441 -6727 2366 206 95 28 chr10 33925050 33925203 -106391562 + L1M2a LINE L1 1863 2004 -5164 372 22 0 0 chr10 33925203 33925248 -106391517 + (CA)n Simple_repeat Simple_repeat 2 46 0 2366 206 95 28 chr10 33925248 33926089 -106390676 + L1M2a LINE L1 2004 2856 -4312 2902 69 44 5 chr10 33926089 33926478 -106390287 + MLT2A1 LTR ERVL 1 404 -40 262 87 72 29 chr10 33926478 33926616 -106390149 + (TA)n Simple_repeat Simple_repeat 2 145 0 380 53 0 35 chr10 33926631 33926688 -106390077 + MLT2A1 LTR ERVL 399 453 0 10636 209 51 29 chr10 33926688 33926935 -106389830 + L1MA9 LINE L1 2923 3163 -4547 2074 95 25 77 chr10 33926935 33927262 -106389503 + AluSg SINE Alu 1 310 0 10636 209 51 29 chr10 33927262 33930303 -106386462 + L1MA9 LINE L1 3163 6135 -1575 553 100 10 10 chr10 33930303 33930403 -106386362 + (TAGA)n Simple_repeat Simple_repeat 2 101 0 10636 209 51 29 chr10 33930403 33930418 -106386347 + L1MA9 LINE L1 6135 6148 -1562 234 0 0 0 chr10 33930418 33930444 -106386321 + (CA)n Simple_repeat Simple_repeat 2 27 0 10636 209 51 29 chr10 33930444 33930509 -106386256 + L1MA9 LINE L1 6148 7271 -439 1574 168 22 6 chr10 33930520 33930823 -106385942 + L1MA9 LINE L1 7398 7698 -12 1947 76 3 99 chr10 33931477 33931781 -106384984 + AluY SINE Alu 35 309 -2 1163 182 21 0 chr10 33931821 33932008 -106384757 - MER58A DNA MER1_type 0 224 34 687 192 56 111 chr10 33933795 33933872 -106382893 + MER7A DNA MER2_type 2 82 -2956 2175 122 0 7 chr10 33933872 33934167 -106382598 - AluSq SINE Alu -20 293 1 687 192 56 111 chr10 33934167 33934192 -106382573 + MER7A DNA MER2_type 82 107 -2931 1885 174 3 0 chr10 33934192 33934490 -106382275 - AluJb SINE Alu -13 299 1 687 192 56 111 chr10 33934490 33934584 -106382181 + MER7A DNA MER2_type 107 186 -160 308 297 0 0 chr10 33934816 33934907 -106381858 - LTR58 LTR ERV1 -229 450 360 759 197 0 0 chr10 33935090 33935217 -106381548 + MER7A DNA MER2_type 171 297 -39 2278 159 28 44 chr10 33935628 33935842 -106380923 + MSTB1 LTR MaLR 4 209 -223 2467 71 0 3 chr10 33935842 33936139 -106380626 - AluY SINE Alu -15 296 1 2278 159 28 44 chr10 33936139 33936358 -106380407 + MSTB1 LTR MaLR 209 430 -2 644 150 0 53 chr10 33938186 33938319 -106378446 + L1PB4 LINE L1 6019 6144 -12 2211 120 3 0 chr10 33938326 33938618 -106378147 + AluSp SINE Alu 1 293 -20 2022 101 0 31 chr10 33940327 33940614 -106376151 - AluSq SINE Alu -11 302 25 307 226 71 0 chr10 33941204 33941288 -106375477 - MIR SINE MIR -10 252 163 2954 162 32 20 chr10 33941291 33941319 -106375446 - L1MA4A LINE L1 -141 6162 6136 615 127 25 17 chr10 33941319 33941437 -106375328 - L1MA4A LINE L1 -4 6299 6181 2954 162 32 20 chr10 33941437 33941994 -106374771 - L1MA4A LINE L1 -167 6136 5570 955 112 0 15 chr10 33942112 33942246 -106374519 - FLAM_C SINE Alu 0 143 12 1809 181 10 3 chr10 33942262 33942561 -106374204 - AluJb SINE Alu -11 301 1 309 109 0 0 chr10 33943584 33943630 -106373135 + (TG)n Simple_repeat Simple_repeat 2 47 0 4189 82 14 2 chr10 33945050 33945663 -106371102 + L1PA8A LINE L1 5374 6019 -112 2330 159 36 12 chr10 33946499 33946915 -106369850 - MSTB LTR MaLR 0 426 1 221 313 0 0 chr10 33947163 33947227 -106369538 + MER5B DNA MER1_type 46 109 -69 186 43 0 0 chr10 33947259 33947282 -106369483 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1785 158 3 18 chr10 33947285 33947570 -106369195 - AluJo SINE Alu -31 281 1 274 273 0 0 chr10 33947687 33947753 -106369012 + L2 LINE L2 3248 3313 0 1937 164 0 6 chr10 33948780 33949092 -106367673 + AluJb SINE Alu 1 310 -2 193 359 26 13 chr10 33949094 33949172 -106367593 + L2 LINE L2 3174 3252 -20 361 225 210 7 chr10 33950458 33950596 -106366169 - MIR SINE MIR -41 221 56 282 292 81 42 chr10 33951330 33951553 -106365212 + L1ME LINE L1 5213 5426 -695 198 71 0 0 chr10 33951553 33951581 -106365184 + (TG)n Simple_repeat Simple_repeat 2 29 0 282 292 81 42 chr10 33951581 33951780 -106364985 + L1ME LINE L1 5426 5651 -470 328 75 0 0 chr10 33951781 33951834 -106364931 - L1MB4 LINE L1 -1 6179 6127 856 128 21 21 chr10 33951990 33952131 -106364634 - L1MB3 LINE L1 -38 6145 6005 1645 150 66 22 chr10 33952131 33952405 -106364360 + AluJo SINE Alu 1 286 -26 490 128 0 12 chr10 33952435 33952521 -106364244 - L1MB3 LINE L1 -162 6021 5937 190 171 24 0 chr10 33952581 33952622 -106364143 - L2 LINE L2 0 3313 3272 272 272 165 0 chr10 33953690 33953793 -106362972 + MIR SINE MIR 65 184 -78 453 255 82 36 chr10 33954040 33954236 -106362529 + L3 LINE CR1 1110 1314 -263 1722 160 3 33 chr10 33954293 33954384 -106362381 + AluJo SINE Alu 3 95 -217 1879 129 41 0 chr10 33954384 33954680 -106362085 + AluSg SINE Alu 1 307 0 1722 160 3 33 chr10 33954680 33954887 -106361878 + AluJo SINE Alu 95 293 -19 27 0 0 0 chr10 33955375 33955402 -106361363 + AT_rich Low_complexity Low_complexity 1 27 0 207 162 0 0 chr10 33957084 33957121 -106359644 + CT-rich Low_complexity Low_complexity 4 40 0 295 224 0 0 chr10 33957888 33957946 -106358819 + MER103 DNA DNA 48 105 -61 1679 147 0 29 chr10 33958184 33958456 -106358309 + AluSx SINE Alu 33 296 -16 404 267 52 0 chr10 33958505 33958640 -106358125 + MIR SINE MIR 47 188 -74 23 78 0 0 chr10 33958673 33958724 -106358041 + AT_rich Low_complexity Low_complexity 1 51 0 1649 153 0 4 chr10 33959097 33959352 -106357413 - AluJo SINE Alu -17 295 42 365 286 41 29 chr10 33960273 33960444 -106356321 + LTR16C LTR ERVL 316 488 -3 2380 95 0 0 chr10 33960455 33960749 -106356016 - AluSg SINE Alu -16 294 1 602 310 31 0 chr10 33961362 33961620 -106355145 + HERV16 LTR ERVL 3288 3553 -2211 768 256 137 59 chr10 33961625 33962050 -106354715 + HERV16 LTR ERVL 3262 3719 -1277 1889 335 43 39 chr10 33962097 33963286 -106353479 + HERV16 LTR ERVL 4130 5323 -441 251 356 17 8 chr10 33963255 33963373 -106353392 + HERV16 LTR ERVL 4787 4905 -91 * 1247 259 51 22 chr10 33963501 33963856 -106352909 + LTR16A LTR ERVL 28 392 -58 231 244 71 71 chr10 33964097 33964224 -106352541 - Charlie5 DNA MER1_type -230 2382 2256 220 322 78 9 chr10 33965818 33965933 -106350832 + L2 LINE L2 3150 3272 0 1938 158 7 0 chr10 33967212 33967509 -106349256 - AluSx SINE Alu -13 299 1 1405 171 86 21 chr10 33970378 33970658 -106346107 + AluJo SINE Alu 1 298 -14 959 168 24 67 chr10 33972205 33972247 -106344518 - MER58A DNA MER1_type -2196 224 182 2306 106 0 3 chr10 33972247 33972549 -106344216 - AluSx SINE Alu -11 301 1 959 168 24 67 chr10 33972549 33972714 -106344051 - MER58A DNA MER1_type -2238 182 26 258 336 27 9 chr10 33972721 33972831 -106343934 - MIR3 SINE MIR -48 160 49 1814 174 0 13 chr10 33973149 33973459 -106343306 - AluJo SINE Alu -6 306 1 1492 155 20 82 chr10 33974120 33974423 -106342342 - AluJo SINE Alu -28 284 1 379 325 45 45 chr10 33974547 33974836 -106341929 + L1MEd LINE L1 254 542 -5577 442 275 18 18 chr10 33975160 33975331 -106341434 + L1MEd LINE L1 895 1065 -5054 22 0 0 0 chr10 33976933 33976955 -106339810 + AT_rich Low_complexity Low_complexity 1 22 0 750 257 23 6 chr10 33977211 33977386 -106339379 + MIR SINE MIR 36 213 -49 220 295 45 62 chr10 33977675 33977787 -106338978 + MIR SINE MIR 141 250 -12 2211 146 22 36 chr10 33977805 33978268 -106338497 + MSTA LTR MaLR 6 426 0 41087 33 1 1 chr10 33978372 33983994 -106332771 + L1PA3 LINE L1 533 6152 -3 22 0 0 0 chr10 33983994 33984016 -106332749 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr10 33984048 33984076 -106332689 + AT_rich Low_complexity Low_complexity 1 28 0 2276 89 6 16 chr10 33984926 33985239 -106331526 - AluSg SINE Alu 0 310 1 1526 186 17 33 chr10 33985373 33985674 -106331091 - AluJo SINE Alu -16 296 1 1746 170 3 32 chr10 33986243 33986555 -106330210 - AluJo SINE Alu -9 303 1 537 285 129 38 chr10 33986836 33987239 -106329526 + L2 LINE L2 2599 3078 -235 1661 124 75 14 chr10 33987239 33987521 -106329244 - AluJo SINE Alu -13 299 1 537 285 129 38 chr10 33987521 33987768 -106328997 + L2 LINE L2 3078 3301 -12 1006 214 6 0 chr10 33988234 33988407 -106328358 - MER45A DNA AcHobo -4 174 1 2162 92 17 20 chr10 33988451 33988743 -106328022 + AluSx SINE Alu 1 291 -21 242 185 0 58 chr10 33989304 33989408 -106327357 - MIR SINE MIR -50 212 89 2434 65 27 3 chr10 33991313 33991327 -106325438 + L1P3 LINE L1 5043 5055 -1117 609 73 0 0 chr10 33991327 33991409 -106325356 - L1PA8 LINE L1 0 6172 6091 2434 65 27 3 chr10 33991409 33991835 -106324930 + L1P3 LINE L1 5055 5491 -681 216 310 56 14 chr10 33993246 33993317 -106323448 - MER5B DNA MER1_type -2 176 103 25 0 0 50 chr10 33993356 33993373 -106323392 + AT_rich Low_complexity Low_complexity 1 17 -21 2027 78 0 4 chr10 33993373 33993629 -106323136 - L1PB1 LINE L1 -5 6146 5892 25 0 0 50 chr10 33993629 33993651 -106323114 + AT_rich Low_complexity Low_complexity 17 38 0 2306 110 0 0 chr10 33994814 33995115 -106321650 - AluSx SINE Alu -11 301 1 389 241 173 0 chr10 33995555 33995688 -106321077 + MER117 DNA MER1_type 2 157 -40 999 157 46 30 chr10 33996518 33996715 -106320050 + THE1C LTR MaLR 176 375 0 242 376 92 0 chr10 33997215 33997324 -106319441 - L2 LINE L2 -38 3234 3116 344 206 164 34 chr10 33997336 33997482 -106319283 - MER104 DNA Tc2 -13 167 3 1223 180 75 81 chr10 33997628 33997866 -106318899 - MLT1B LTR MaLR -47 343 106 1394 187 40 90 chr10 33997866 33998245 -106318520 - MLT1A1 LTR MaLR -3 362 3 1223 180 75 81 chr10 33998245 33998351 -106318414 - MLT1B LTR MaLR -284 106 1 412 269 69 28 chr10 33998362 33998507 -106318258 + MIR SINE MIR 111 261 -1 1864 152 35 3 chr10 33998695 33998985 -106317780 - AluJo SINE Alu -13 299 1 1581 189 39 0 chr10 33999372 33999652 -106317113 + AluJo SINE Alu 1 291 -21 181 259 86 17 chr10 33999682 33999740 -106317025 - MIR SINE MIR -85 123 62 208 245 0 41 chr10 33999997 34000046 -106316719 - L2 LINE L2 -95 3218 3172 197 386 0 0 chr10 34000072 34000160 -106316605 - L2 LINE L2 -219 3053 2966 448 205 83 90 chr10 34000578 34000734 -106316031 + MER112 DNA MER1_type 2 156 -104 424 274 244 0 chr10 34000979 34001180 -106315585 + MIR SINE MIR 12 261 -1 2253 90 3 3 chr10 34002671 34002970 -106313795 + AluSc SINE Alu 1 299 -10 33 66 0 0 chr10 34003779 34003840 -106312925 + GC_rich Low_complexity Low_complexity 1 61 0 323 298 164 46 chr10 34003935 34004173 -106312592 - L1M2a LINE L1 -6222 946 681 278 329 84 17 chr10 34005082 34005248 -106311517 + MIR SINE MIR 17 192 -61 327 294 200 12 chr10 34005342 34005597 -106311168 - L2 LINE L2 -61 3252 2950 723 236 128 0 chr10 34005628 34005823 -106310942 - MIR SINE MIR -21 241 22 735 300 187 19 chr10 34005861 34006384 -106310381 - L2 LINE L2 -388 2926 2316 983 256 0 21 chr10 34006415 34006657 -106310108 - MIR SINE MIR -15 247 11 283 219 55 0 chr10 34006661 34006734 -106310031 - L2 LINE L2 -995 2319 2243 274 326 116 0 chr10 34006876 34006971 -106309794 + L2 LINE L2 3140 3245 -27 30 0 0 0 chr10 34007861 34007891 -106308874 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr10 34008459 34008488 -106308277 + AT_rich Low_complexity Low_complexity 1 29 0 7710 49 0 2 chr10 34008488 34009775 -106306990 - L1PA5 LINE L1 -3 6151 4869 24 0 0 0 chr10 34009885 34009909 -106306856 + AT_rich Low_complexity Low_complexity 1 24 0 898 208 0 42 chr10 34010324 34010516 -106306249 + MER20 DNA MER1_type 36 219 0 244 308 0 0 chr10 34010521 34010586 -106306179 + CT-rich Low_complexity Low_complexity 3 67 0 2384 68 0 7 chr10 34011101 34011397 -106305368 - AluY SINE Alu -17 294 1 347 336 50 0 chr10 34011429 34011548 -106305217 - MIR SINE MIR -64 198 74 9117 99 25 31 chr10 34012686 34013181 -106303584 - HSMAR1 DNA Mariner 0 1287 791 2355 110 3 0 chr10 34013181 34013489 -106303276 + AluSx SINE Alu 1 309 -3 9117 99 25 31 chr10 34013489 34014287 -106302478 - HSMAR1 DNA Mariner -496 791 1 22 0 0 0 chr10 34014410 34014432 -106302333 + AT_rich Low_complexity Low_complexity 1 22 0 643 115 0 0 chr10 34014600 34014687 -106302078 + AluJ/FRAM SINE Alu 216 302 -10 33 43 0 0 chr10 34014924 34014971 -106301794 + AT_rich Low_complexity Low_complexity 1 47 0 1209 196 75 95 chr10 34015082 34015528 -106301237 + LTR56 LTR ERV1 2 436 -1 268 220 63 58 chr10 34015763 34015869 -106300896 - L1MC/D LINE L1 -708 5453 5375 786 175 34 17 chr10 34015888 34016065 -106300700 + MER53 DNA DNA 7 186 -3 363 317 97 20 chr10 34016077 34016427 -106300338 - L1MC/D LINE L1 -789 5357 4981 798 263 30 0 chr10 34016429 34016627 -106300138 - L2 LINE L2 -455 2859 2656 628 308 43 49 chr10 34016627 34016932 -106299833 + MLT1J LTR MaLR 1 303 -208 234 224 29 80 chr10 34016938 34017112 -106299653 + MLT1J1 LTR MaLR 280 396 -13 742 274 137 4 chr10 34017724 34017979 -106298786 - MLT1I LTR MaLR -49 360 72 726 290 70 48 chr10 34018901 34019323 -106297442 + MLT1J LTR MaLR 72 448 -2 23 0 0 0 chr10 34019547 34019570 -106297195 + AT_rich Low_complexity Low_complexity 1 23 0 1196 223 47 36 chr10 34019687 34019988 -106296777 + MLT1A2 LTR MaLR 3 306 -68 2340 103 0 0 chr10 34020080 34020380 -106296385 - AluSx SINE Alu -12 300 1 188 243 0 14 chr10 34020466 34020536 -106296229 + (TAA)n Simple_repeat Simple_repeat 1 69 0 1382 187 55 52 chr10 34020574 34020863 -106295902 + AluJo SINE Alu 1 290 -22 222 37 0 0 chr10 34020863 34020880 -106295885 + (CA)n Simple_repeat Simple_repeat 1 44 0 222 37 0 0 chr10 34020880 34020907 -106295858 + (CA)n Simple_repeat Simple_repeat 2 28 0 658 280 72 30 chr10 34020928 34021146 -106295619 - MIR SINE MIR 0 262 32 1825 186 30 24 chr10 34021146 34021518 -106295247 + MLT1A2 LTR MaLR 1 374 0 658 280 72 30 chr10 34021518 34021535 -106295230 - MIR SINE MIR -230 32 17 386 296 162 62 chr10 34021591 34022382 -106294383 - L2 LINE L2 -1227 2087 1218 2608 20 0 0 chr10 34022411 34022704 -106294061 - AluYa5 SINE Alu -18 293 1 411 201 67 0 chr10 34022854 34022960 -106293805 - L1MB4 LINE L1 -292 5888 5759 893 152 132 39 chr10 34022960 34023164 -106293601 - AluJo SINE Alu -79 233 11 2687 177 36 16 chr10 34023166 34024050 -106292715 - L1MB4 LINE L1 -419 5764 4855 326 211 0 0 chr10 34024057 34024109 -106292656 + 5S rRNA rRNA 2 53 -68 2497 86 0 0 chr10 34024142 34024444 -106292321 - AluSx SINE Alu -10 302 1 4674 242 36 37 chr10 34024444 34026347 -106290418 - L1M1 LINE L1 -4137 2213 647 3075 271 12 19 chr10 34026405 34027151 -106289614 - L1M1 LINE L1 -5530 751 11 9028 164 96 19 chr10 34027152 34028187 -106288578 - L1MCa LINE L1 -4432 1994 1040 207 0 0 0 chr10 34028187 34028210 -106288555 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2083 114 11 0 chr10 34028213 34028493 -106288272 - AluSx SINE Alu -24 288 6 9028 164 96 19 chr10 34028493 34029303 -106287462 - L1MCa LINE L1 -5387 1039 3 1389 198 52 22 chr10 34029463 34029787 -106286978 - Ricksha DNA DNA -1528 518 185 * 3709 139 16 23 chr10 34029638 34030255 -106286510 - HERV16 LTR ERVL -7 5757 5145 10546 50 3 0 chr10 34030270 34032272 -106284493 - L1PA5 LINE L1 0 6154 4148 1178 75 6 0 chr10 34032279 34032438 -106284327 - L1PA5 LINE L1 -3304 2842 2683 * 18799 56 1 3 chr10 34032437 34034794 -106281971 - L1P LINE L1 -1999 4147 1796 1482 177 123 45 chr10 34034794 34035154 -106281611 - MER4E LTR ERV1 -409 494 1 336 392 46 11 chr10 34035248 34035511 -106281254 - HERV16 LTR ERVL -3419 1577 1306 718 325 38 30 chr10 34035541 34036046 -106280719 - HERV16 LTR ERVL -3779 1217 709 250 200 0 0 chr10 34036646 34036691 -106280074 - LTR16C LTR ERVL -12 479 435 2405 86 3 0 chr10 34036692 34036995 -106279770 + AluSp SINE Alu 1 304 -9 569 253 114 15 chr10 34037051 34037253 -106279512 - LTR16C LTR ERVL -59 432 211 415 143 43 0 chr10 34037310 34037380 -106279385 - AluSc SINE Alu -18 291 219 1732 180 14 7 chr10 34038493 34038787 -106277978 - AluJb SINE Alu -16 296 1 746 171 158 7 chr10 34038881 34039033 -106277732 - MER45A DNA AcHobo 0 178 4 339 295 23 8 chr10 34039050 34039179 -106277586 + MIR3 SINE MIR 11 141 -67 527 258 44 22 chr10 34039504 34039686 -106277079 + MARNA DNA Mariner 167 352 -234 425 321 38 19 chr10 34039806 34040015 -106276750 + MARNA DNA Mariner 358 570 -16 2227 109 3 0 chr10 34040057 34040351 -106276414 + AluSp SINE Alu 1 295 -18 2181 118 0 3 chr10 34042423 34042728 -106274037 + AluSx SINE Alu 1 304 -8 241 212 113 13 chr10 34043751 34043844 -106272921 - L1ME2 LINE L1 -222 5923 5824 594 67 0 0 chr10 34044203 34044278 -106272487 + MADE1 DNA Mariner 1 75 -5 1085 302 98 29 chr10 34044308 34045692 -106271073 - L1ME2 LINE L1 -537 5616 4126 265 300 33 7 chr10 34045710 34045860 -106270905 - L1ME2 LINE L1 -3661 2468 2315 301 294 46 61 chr10 34045883 34046080 -106270685 - L1ME2 LINE L1 -4006 2304 2111 3918 249 61 30 chr10 34046082 34047654 -106269111 + L1MEc LINE L1 1658 3280 -2935 2461 83 0 0 chr10 34047654 34047955 -106268810 + AluSg SINE Alu 1 301 -9 3918 249 61 30 chr10 34047955 34048351 -106268414 + L1MEc LINE L1 3280 3662 -2553 1588 245 147 11 chr10 34048347 34048911 -106267854 + L1MEc LINE L1 4051 4691 -1524 * 1628 277 114 59 chr10 34049093 34050445 -106266320 - L1ME2 LINE L1 -4816 1315 2 1241 311 171 26 chr10 34050911 34052202 -106264563 - L2 LINE L2 0 3313 1836 362 200 14 136 chr10 34053864 34054004 -106262761 + L1ME4a LINE L1 5935 6057 -64 2204 97 20 10 chr10 34054014 34054337 -106262428 - AluSx SINE Alu 0 312 1 1724 134 0 4 chr10 34054881 34055135 -106261630 - AluSg SINE Alu -7 303 51 502 243 88 33 chr10 34055248 34055429 -106261336 - MIR SINE MIR -54 208 18 270 0 0 0 chr10 34055625 34055655 -106261110 + (CA)n Simple_repeat Simple_repeat 2 31 0 676 231 68 68 chr10 34056923 34057121 -106259644 + L1ME1 LINE L1 5891 6091 -75 2103 107 48 0 chr10 34057121 34057410 -106259355 + AluSx SINE Alu 3 305 -7 676 231 68 68 chr10 34057410 34057462 -106259303 + L1ME1 LINE L1 6090 6141 -25 1994 128 3 19 chr10 34058613 34058964 -106257801 - MER4A LTR ERV1 0 664 261 644 103 21 10 chr10 34058964 34059061 -106257704 - MER4A LTR ERV1 -566 98 1 206 179 26 0 chr10 34059099 34059138 -106257627 - L3 LINE CR1 -2 1575 1536 500 249 59 102 chr10 34059756 34059889 -106256876 - MER102a DNA MER1_type -1089 328 191 2432 161 41 5 chr10 34059889 34060306 -106256459 + MSTB1 LTR MaLR 1 432 0 500 249 59 102 chr10 34060306 34060442 -106256323 - MER102a DNA MER1_type -1226 191 71 2186 141 0 0 chr10 34060442 34060754 -106256011 - AluSx SINE Alu 0 312 1 500 249 59 102 chr10 34060754 34060788 -106255977 - MER102a DNA MER1_type -1346 71 37 482 304 158 21 chr10 34060833 34061168 -106255597 - L3 LINE CR1 -106 1471 1091 1083 199 41 8 chr10 34061178 34061486 -106255279 - MLT1A1 LTR MaLR 0 365 8 431 292 100 89 chr10 34061498 34061858 -106254907 - L3 LINE CR1 -514 1063 700 420 282 24 0 chr10 34062284 34062408 -106254357 + L1ME LINE L1 7 133 -5937 817 265 119 107 chr10 34062548 34062960 -106253805 - LTR16A LTR ERVL -33 417 1 222 214 11 34 chr10 34063033 34063122 -106253643 + (TA)n Simple_repeat Simple_repeat 2 88 0 1200 186 5 0 chr10 34063164 34063357 -106253408 - MSTA LTR MaLR -234 194 1 306 0 0 0 chr10 34063392 34063426 -106253339 + (CA)n Simple_repeat Simple_repeat 2 35 0 2940 96 73 0 chr10 34063471 34063868 -106252897 + MSTA LTR MaLR 1 426 -2 2277 180 35 64 chr10 34064087 34064588 -106252177 - MLT2B1 LTR ERVL -25 464 1 1838 173 3 10 chr10 34064676 34064977 -106251788 + AluJb SINE Alu 1 299 -13 464 285 96 52 chr10 34065144 34065710 -106251055 + L1ME LINE L1 560 1156 -4914 228 268 98 98 chr10 34065824 34066029 -106250736 - MIR SINE MIR -50 212 8 242 240 110 149 chr10 34067236 34067390 -106249375 + MIR SINE MIR 2 149 -113 1700 171 68 54 chr10 34067513 34067882 -106248883 - MLT1A2 LTR MaLR 0 374 1 328 214 69 92 chr10 34068288 34068419 -106248346 + MIR SINE MIR 126 253 -9 1270 257 29 11 chr10 34068732 34069160 -106247605 - MLT1H1 LTR MaLR -61 481 1 249 336 62 55 chr10 34069292 34069438 -106247327 + L2 LINE L2 3126 3272 0 303 348 70 9 chr10 34069477 34069592 -106247173 + L2 LINE L2 3142 3263 -9 339 85 0 0 chr10 34069981 34070028 -106246737 + (CA)n Simple_repeat Simple_repeat 2 48 0 332 103 0 29 chr10 34072478 34072546 -106244219 + (CAGAGA)n Simple_repeat Simple_repeat 2 67 0 370 150 14 186 chr10 34072731 34072871 -106243894 - MIR SINE MIR -24 238 123 3258 159 43 19 chr10 34073360 34074045 -106242720 + Tigger7 DNA MER2_type 1 2487 0 6095 228 94 17 chr10 34075074 34077224 -106239541 + L1M4 LINE L1 2 2448 -4377 660 207 69 57 chr10 34077516 34077762 -106239003 - MER112 DNA MER1_type -6 254 6 980 269 121 27 chr10 34077946 34078693 -106238072 + L2 LINE L2 2489 3308 -5 306 341 32 23 chr10 34079087 34079304 -106237461 - MARNA DNA Mariner -151 435 217 563 129 30 0 chr10 34079999 34080131 -106236634 + (TA)n Simple_repeat Simple_repeat 2 137 0 214 241 30 0 chr10 34080250 34080416 -106236349 + (TA)n Simple_repeat Simple_repeat 2 172 0 600 127 0 48 chr10 34080452 34080641 -106236124 + (TA)n Simple_repeat Simple_repeat 1 180 0 4244 215 210 40 chr10 34080656 34081466 -106235299 + L1MDa LINE L1 107 778 -5762 207 0 0 0 chr10 34081466 34081489 -106235276 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4244 215 210 40 chr10 34081489 34081520 -106235245 + L1MDa LINE L1 778 802 -5738 2556 66 0 3 chr10 34081520 34081821 -106234944 - AluY SINE Alu -11 300 1 4244 215 210 40 chr10 34081821 34082496 -106234269 + L1MDa LINE L1 802 1882 -4658 11167 116 19 15 chr10 34082499 34083692 -106233073 - Tigger1 DNA MER2_type -247 2171 984 1781 192 7 0 chr10 34083692 34083994 -106232771 + AluSx SINE Alu 1 304 -8 2391 92 0 0 chr10 34083997 34084292 -106232473 + AluY SINE Alu 1 295 -16 11167 116 19 15 chr10 34084292 34084803 -106231962 - Tigger1 DNA MER2_type -1435 983 456 2619 100 23 18 chr10 34084803 34085194 -106231571 + MSTA-int LTR MaLR 1188 1580 0 1996 166 119 8 chr10 34085194 34085579 -106231186 + MSTA LTR MaLR 1 428 0 2672 173 20 9 chr10 34085579 34086037 -106230728 - Tigger1 DNA MER2_type -1954 464 2 401 214 42 10 chr10 34086039 34086144 -106230621 + L1ME4a LINE L1 5641 5736 -430 409 240 10 0 chr10 34086813 34086909 -106229856 + MIR SINE MIR 55 151 -111 1934 172 20 20 chr10 34088412 34088802 -106227963 - MLT1B LTR MaLR 0 390 1 2225 116 7 3 chr10 34088829 34089139 -106227626 - AluSq SINE Alu -2 311 1 353 288 147 18 chr10 34089216 34089379 -106227386 - MIR SINE MIR -78 184 1 2242 109 6 3 chr10 34089608 34089919 -106226846 + AluSx SINE Alu 1 312 0 239 319 26 9 chr10 34089922 34090029 -106226736 + L1ME4a LINE L1 5815 5924 -192 216 0 0 0 chr10 34090029 34090053 -106226712 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 321 219 0 117 chr10 34090076 34090204 -106226561 + L1ME4a LINE L1 6009 6121 0 180 245 20 0 chr10 34091033 34091082 -106225683 - MIR3 SINE MIR -8 200 151 205 303 83 18 chr10 34091265 34091374 -106225391 - MIR SINE MIR -73 135 20 216 257 138 18 chr10 34092201 34092310 -106224455 - L2 LINE L2 -227 3045 2924 884 200 43 0 chr10 34094912 34095102 -106221663 + MSTA-int LTR MaLR 32 229 -1477 1714 152 156 9 chr10 34095102 34095417 -106221348 + MSTA LTR MaLR 68 428 0 9780 129 7 54 chr10 34095419 34097074 -106219691 + MSTA-int LTR MaLR 3 1579 -1 742 158 211 7 chr10 34097075 34097227 -106219538 + MSTA LTR MaLR 1 183 -245 1537 109 101 16 chr10 34097461 34097708 -106219057 + MSTA LTR MaLR 161 428 0 1095 233 24 12 chr10 34097708 34097961 -106218804 + MLT-int LTR MaLR 387 642 -1093 322 270 36 36 chr10 34098218 34098329 -106218436 - L2 LINE L2 0 3313 3203 282 160 0 0 chr10 34099584 34099634 -106217131 + (CA)n Simple_repeat Simple_repeat 2 51 0 269 277 31 39 chr10 34099756 34099886 -106216879 + L2 LINE L2 2925 3053 -219 770 187 0 0 chr10 34102184 34102318 -106214447 + MER94 DNA DNA 1 134 0 2009 130 7 21 chr10 34103659 34103944 -106212821 + AluSx SINE Alu 1 281 -31 207 69 0 0 chr10 34103947 34103976 -106212789 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 541 297 54 58 chr10 34104460 34104887 -106211878 + L1MCc LINE L1 14 438 -5985 963 263 103 41 chr10 34105393 34106085 -106210680 + L1MCc LINE L1 1262 2003 -4893 1838 168 0 0 chr10 34106085 34106371 -106210394 + AluJb SINE Alu 20 305 -7 1696 82 24 4 chr10 34106448 34106703 -106210062 - L1MA2 LINE L1 0 6304 6045 43112 56 5 1 chr10 34106703 34112813 -106203952 - L1PA5 LINE L1 -9 6145 11 542 213 49 129 chr10 34112812 34113131 -106203634 + L1M2 LINE L1 1564 1924 -4292 * 240 111 0 0 chr10 34113131 34113176 -106203589 + (TG)n Simple_repeat Simple_repeat 2 46 0 542 213 49 129 chr10 34113176 34113220 -106203545 + L1M2 LINE L1 1924 1970 -4246 2086 135 3 0 chr10 34113235 34113524 -106203241 + AluSx SINE Alu 9 298 -14 253 271 140 0 chr10 34113542 34113649 -106203116 + L1MCc LINE L1 2570 2691 -4431 552 279 35 35 chr10 34113659 34113831 -106202934 + MLT1J LTR MaLR 184 355 -156 1984 151 6 22 chr10 34115043 34115390 -106201375 + AluSx SINE Alu 1 342 0 434 282 151 62 chr10 34115683 34115995 -106200770 + MLT1L LTR MaLR 3 286 -329 1661 160 43 43 chr10 34115995 34116295 -106200470 + AluJo SINE Alu 1 300 -12 434 282 151 62 chr10 34116295 34116545 -106200220 + MLT1L LTR MaLR 286 615 0 399 287 44 7 chr10 34117550 34117686 -106199079 + MIR SINE MIR 47 187 -75 2396 82 7 0 chr10 34117914 34118217 -106198548 + AluSp SINE Alu 1 305 -8 216 274 0 16 chr10 34118863 34118925 -106197840 + GA-rich Low_complexity Low_complexity 5 65 0 21 36 0 0 chr10 34119092 34119120 -106197645 + AT_rich Low_complexity Low_complexity 1 28 0 1502 191 70 0 chr10 34119120 34119393 -106197372 + AluJo SINE Alu 1 292 -20 658 205 38 102 chr10 34119468 34119761 -106197004 + L1ME4a LINE L1 5672 5945 -176 1819 155 50 83 chr10 34120414 34120578 -106196187 + MLT1D LTR MaLR 1 169 -336 2132 142 0 0 chr10 34120578 34120873 -106195892 - AluSx SINE Alu -17 295 1 1819 155 50 83 chr10 34120873 34120908 -106195857 + MLT1D LTR MaLR 169 204 -301 2109 187 72 119 chr10 34120908 34121671 -106195094 + LTR8A LTR ERV1 1 727 0 1819 155 50 83 chr10 34121671 34121869 -106194896 + MLT1D LTR MaLR 204 386 -119 * 3738 125 36 0 chr10 34121851 34122436 -106194329 + LTR24C LTR ERV1 30 635 0 255 132 0 0 chr10 34122436 34122474 -106194291 + MLT1D LTR MaLR 468 505 0 181 274 48 0 chr10 34122493 34122555 -106194210 + MIR SINE MIR 124 188 -74 1134 150 0 99 chr10 34122736 34122969 -106193796 + AluJo SINE Alu 90 299 -13 283 211 0 0 chr10 34123028 34123106 -106193659 - MIR SINE MIR -64 144 66 295 346 13 26 chr10 34123169 34123322 -106193443 - MER5A DNA MER1_type -32 157 7 331 246 132 54 chr10 34123423 34123756 -106193009 - L1MC4 LINE L1 -2 8040 7682 196 254 0 60 chr10 34124121 34124188 -106192577 + L2 LINE L2 2427 2489 -825 206 287 30 20 chr10 34124379 34124480 -106192285 + L2 LINE L2 2719 2820 -494 757 333 47 43 chr10 34124989 34125186 -106191579 + L2 LINE L2 2188 2383 -931 2608 139 25 28 chr10 34125186 34125431 -106191334 - MSTB1 LTR MaLR 0 432 187 225 0 0 0 chr10 34125431 34125456 -106191309 + (TG)n Simple_repeat Simple_repeat 2 26 0 2608 139 25 28 chr10 34125456 34125642 -106191123 - MSTB1 LTR MaLR -245 187 2 757 333 47 43 chr10 34125642 34125978 -106190787 + L2 LINE L2 2383 2723 -591 4226 89 11 101 chr10 34126635 34127365 -106189400 + MER4A LTR ERV1 1 664 0 2325 116 73 14 chr10 34128433 34128777 -106187988 - THE1B LTR MaLR 0 364 1 11205 84 5 0 chr10 34128777 34130267 -106186498 - THE1B-int LTR MaLR 0 1580 84 1958 147 75 15 chr10 34130271 34130604 -106186161 - THE1B LTR MaLR -11 353 1 1196 284 108 33 chr10 34130856 34131339 -106185426 + LTR33 LTR ERVL 1 519 -2 1873 122 3 52 chr10 34131818 34132147 -106184618 - MER4E LTR ERV1 -1 778 466 1223 131 10 10 chr10 34132194 34132393 -106184372 - MER4B LTR ERV1 -411 199 1 960 344 99 29 chr10 34132454 34133464 -106183301 + ERVL LTR ERVL 861 1941 -3823 * 1644 306 54 34 chr10 34133462 34134403 -106182362 + ERVL LTR ERVL 1906 2935 -2111 2051 150 127 18 chr10 34134649 34135035 -106181730 + MSTA LTR MaLR 1 428 0 398 312 24 29 chr10 34135089 34135261 -106181504 + ERVL LTR ERVL 3234 3457 -2244 1610 206 48 25 chr10 34135285 34135678 -106181087 + MLT2D LTR ERVL 1 402 -12 890 273 18 4 chr10 34135875 34136150 -106180615 + ERVL LTR ERVL 3767 4045 -1719 530 309 77 42 chr10 34136242 34136284 -106180481 + ERVL LTR ERVL 4264 4303 -1461 2472 169 20 2 chr10 34136284 34136692 -106180073 - MER47B DNA MER2_type -3 415 1 530 309 77 42 chr10 34136692 34136934 -106179831 + ERVL LTR ERVL 4303 4558 -1206 1918 151 0 35 chr10 34136939 34137250 -106179515 - AluJb SINE Alu -7 305 6 989 290 94 18 chr10 34137916 34138309 -106178456 + LTR33 LTR ERVL 44 466 -55 1974 152 0 7 chr10 34138310 34138606 -106178159 + AluJo SINE Alu 1 294 -18 226 161 71 0 chr10 34139678 34139790 -106176975 + (TA)n Simple_repeat Simple_repeat 1 120 0 342 0 0 0 chr10 34140126 34140164 -106176601 + (CA)n Simple_repeat Simple_repeat 2 39 0 809 268 17 21 chr10 34140435 34140726 -106176039 + L1ME3A LINE L1 5876 6165 -5 235 310 34 96 chr10 34140759 34141015 -106175750 + L3 LINE CR1 857 1090 -487 2278 89 38 0 chr10 34141015 34141307 -106175458 - AluSp SINE Alu -10 303 1 235 310 34 96 chr10 34141307 34141373 -106175392 + L3 LINE CR1 1090 1159 -418 2462 83 0 3 chr10 34141636 34141938 -106174827 + AluSq SINE Alu 1 301 -12 1727 157 9 63 chr10 34143885 34144204 -106172561 + AluJo SINE Alu 4 305 -7 303 28 0 0 chr10 34145036 34145072 -106171693 + (CA)n Simple_repeat Simple_repeat 1 36 0 1817 168 18 0 chr10 34146135 34146462 -106170303 + MLT1B LTR MaLR 1 333 -57 262 250 50 86 chr10 34146772 34146806 -106169959 - MER5B DNA MER1_type -31 158 124 1667 179 17 10 chr10 34146806 34147103 -106169662 + AluJo SINE Alu 1 299 -13 262 250 50 86 chr10 34147103 34147218 -106169547 - MER5B DNA MER1_type -65 124 1 1821 97 0 0 chr10 34147341 34147567 -106169198 - AluSg/x SINE Alu -5 307 82 427 306 65 48 chr10 34147638 34147824 -106168941 - MIR3 SINE MIR 0 208 20 266 264 222 21 chr10 34147929 34148073 -106168692 - MIR SINE MIR -62 200 28 716 308 112 39 chr10 34148744 34149041 -106167724 - L2 LINE L2 0 3313 2968 553 141 11 0 chr10 34149041 34149133 -106167632 - HY4 scRNA scRNA 0 93 1 716 308 112 39 chr10 34149133 34149300 -106167465 - L2 LINE L2 -345 2968 2815 353 319 106 6 chr10 34149340 34149500 -106167265 - L2 LINE L2 -645 2669 2494 183 281 35 0 chr10 34149671 34149728 -106167037 + MIR SINE MIR 54 112 -150 562 250 79 18 chr10 34149783 34149986 -106166779 + MIR SINE MIR 1 214 -48 1053 65 7 0 chr10 34151346 34151484 -106165281 + L1MA3 LINE L1 6164 6302 -3 788 165 8 0 chr10 34151781 34151908 -106164857 + FLAM_A SINE Alu 2 129 -4 24 0 0 0 chr10 34151908 34151932 -106164833 + AT_rich Low_complexity Low_complexity 1 24 0 650 286 71 43 chr10 34152704 34153054 -106163711 + L2 LINE L2 2859 3218 -95 2076 116 3 23 chr10 34153057 34153359 -106163406 - AluSx SINE Alu -16 296 1 354 294 151 8 chr10 34153976 34154102 -106162663 - MIR3 SINE MIR -22 186 43 882 102 17 0 chr10 34154254 34154372 -106162393 - FLAM_C SINE Alu -17 126 7 356 161 0 5 chr10 34154694 34154788 -106161977 - FLAM_A SINE Alu 0 146 63 417 297 121 11 chr10 34155055 34155237 -106161528 + MIR SINE MIR 47 248 -14 1987 148 3 0 chr10 34155394 34155685 -106161080 - AluSx SINE Alu -6 306 15 1948 175 16 60 chr10 34155738 34156172 -106160593 + MLT1C LTR MaLR 36 450 -17 1734 180 166 0 chr10 34156172 34156539 -106160226 - MSTA LTR MaLR 0 428 1 1417 212 52 17 chr10 34156618 34156967 -106159798 + MER63 DNA MER1_type 682 1042 -19 379 340 57 31 chr10 34157933 34158127 -106158638 + MIR SINE MIR 62 260 -2 207 100 0 0 chr10 34158127 34158157 -106158608 + (GGA)n Simple_repeat Simple_repeat 1 30 0 4989 201 24 9 chr10 34158586 34159769 -106156996 + L1 LINE L1 4075 5274 -872 772 209 92 34 chr10 34160483 34160689 -106156076 + MER20 DNA MER1_type 2 219 0 193 298 43 32 chr10 34160781 34160875 -106155890 + L2 LINE L2 3161 3255 -17 2187 123 7 0 chr10 34161024 34161325 -106155440 - AluSg1 SINE Alu -6 303 1 2166 112 0 11 chr10 34161341 34161628 -106155137 - AluSx SINE Alu -28 284 1 2284 95 3 3 chr10 34161717 34162021 -106154744 - AluSx SINE Alu -8 304 1 1280 161 24 0 chr10 34162029 34162240 -106154525 - Tigger3(Golem) DNA MER2_type -2813 216 1 202 225 39 39 chr10 34162438 34162567 -106154198 + G-rich Low_complexity Low_complexity 2 130 0 222 339 189 0 chr10 34163398 34163525 -106153240 + MIR3 SINE MIR 47 197 -11 404 262 99 0 chr10 34163769 34163910 -106152855 - MIR3 SINE MIR -5 203 49 1738 177 0 3 chr10 34164343 34164625 -106152140 + AluJo SINE Alu 1 281 -31 566 82 12 0 chr10 34164628 34164713 -106152052 + (GGAA)n Simple_repeat Simple_repeat 4 89 0 252 70 0 70 chr10 34165176 34165219 -106151546 + AluJ/FLAM SINE Alu 21 60 -242 440 215 11 11 chr10 34165219 34165312 -106151453 - AluJo SINE Alu -133 179 87 2446 80 0 43 chr10 34165500 34165873 -106150892 - MER4A LTR ERV1 -307 357 1 2110 153 0 7 chr10 34166055 34166356 -106150409 + AluSx SINE Alu 1 299 -13 183 42 0 0 chr10 34166360 34166384 -106150381 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 245 341 0 0 chr10 34166568 34166656 -106150109 + (TGAA)n Simple_repeat Simple_repeat 1 88 0 2207 181 12 5 chr10 34166673 34166860 -106149905 + MSTB LTR MaLR 14 198 -228 5220 46 16 0 chr10 34166860 34167487 -106149278 + L1PA8 LINE L1 5532 6168 -4 2207 181 12 5 chr10 34167487 34167709 -106149056 + MSTB LTR MaLR 198 426 0 424 268 38 65 chr10 34169084 34169345 -106147420 + L1ME4a LINE L1 5509 5762 -359 739 250 196 19 chr10 34169376 34169943 -106146822 - Charlie7 DNA MER1_type -23 2589 1923 2557 88 0 0 chr10 34169968 34170299 -106146466 - L1PA13 LINE L1 -8 6155 5825 283 0 23 45 chr10 34170301 34170345 -106146420 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 2066 117 7 3 chr10 34170345 34170627 -106146138 - AluSx SINE Alu -29 283 1 373 263 59 7 chr10 34170630 34170782 -106145983 + Charlie7 DNA MER1_type 1396 1555 -1057 1416 122 0 0 chr10 34170803 34171011 -106145754 + AluSq SINE Alu 95 302 0 1159 254 16 0 chr10 34171059 34171315 -106145450 - MIR SINE MIR -2 260 1 2251 233 187 40 chr10 34171341 34171651 -106145114 - Charlie7 DNA MER1_type -1296 1316 1053 2288 105 0 16 chr10 34171651 34171965 -106144800 - AluSq SINE Alu -2 311 3 1952 158 3 0 chr10 34171970 34172261 -106144504 - AluJb SINE Alu -20 292 1 2251 233 187 40 chr10 34172261 34172745 -106144020 - Charlie7 DNA MER1_type -1562 1050 638 1038 127 0 58 chr10 34172745 34172783 -106143982 - L1PB4 LINE L1 -1 6155 6116 1907 136 4 0 chr10 34172783 34173048 -106143717 - AluSx SINE Alu -12 300 35 1038 127 0 58 chr10 34173048 34173198 -106143567 - L1PB4 LINE L1 -40 6116 5978 2251 233 187 40 chr10 34173198 34173510 -106143255 - Charlie7 DNA MER1_type -1974 638 40 259 278 43 9 chr10 34173529 34173644 -106143121 + L1ME4a LINE L1 5791 5909 -212 1723 172 111 18 chr10 34173812 34174207 -106142558 + MSTB1 LTR MaLR 1 432 0 1113 97 0 7 chr10 34174640 34174785 -106141980 + FRAM SINE Alu 1 140 -36 2185 135 0 0 chr10 34175233 34175537 -106141228 - AluSx SINE Alu 0 312 9 1046 115 0 0 chr10 34175539 34175678 -106141087 - AluSq/x SINE Alu -173 139 1 1563 180 20 39 chr10 34175743 34176048 -106140717 + AluJo SINE Alu 1 299 -13 636 252 19 48 chr10 34176123 34176333 -106140432 - MIR SINE MIR -57 205 2 228 296 0 0 chr10 34176777 34176902 -106139863 + (TG)n Simple_repeat Simple_repeat 2 126 0 195 333 146 10 chr10 34177954 34178050 -106138715 - MIR SINE MIR -76 132 24 444 125 102 0 chr10 34178623 34178711 -106138054 + L1MB3 LINE L1 6080 6176 -7 1745 197 0 16 chr10 34178714 34179029 -106137736 - AluJo SINE Alu 0 312 3 1979 105 87 19 chr10 34179029 34179352 -106137413 + THE1B LTR MaLR 1 345 -19 1681 83 5 14 chr10 34179754 34179970 -106136795 + AluSq SINE Alu 1 214 -99 1491 163 4 0 chr10 34179977 34180204 -106136561 - AluJb SINE Alu -82 230 3 693 138 50 50 chr10 34180206 34180365 -106136400 + L1MB4 LINE L1 6020 6178 -2 207 88 0 0 chr10 34180494 34180528 -106136237 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 207 0 0 0 chr10 34180527 34180550 -106136215 + (TC)n Simple_repeat Simple_repeat 2 24 0 724 130 16 32 chr10 34180550 34180673 -106136092 - AluSx SINE Alu -10 299 179 279 44 267 0 chr10 34180674 34180719 -106136046 + AluSg/x SINE Alu 138 194 -106 1322 106 0 32 chr10 34180720 34180908 -106135857 - AluSx SINE Alu -130 182 1 269 300 107 104 chr10 34181510 34181960 -106134805 + L2 LINE L2 2822 3272 0 244 280 121 51 chr10 34181961 34182118 -106134647 + MIR SINE MIR 24 191 -71 1997 137 7 10 chr10 34182123 34182415 -106134350 + AluSx SINE Alu 1 291 -21 526 278 31 19 chr10 34182493 34182655 -106134110 - MIR SINE MIR -4 258 95 1915 162 0 7 chr10 34182679 34182987 -106133778 + AluJo SINE Alu 1 306 -6 767 151 0 8 chr10 34183004 34183123 -106133642 + FLAM_C SINE Alu 1 118 -15 1491 174 89 0 chr10 34184625 34184907 -106131858 - AluJo SINE Alu -3 309 3 999 135 22 17 chr10 34185395 34185573 -106131192 + L1PA16 LINE L1 5979 6157 -9 21 82 0 0 chr10 34186307 34186356 -106130409 + AT_rich Low_complexity Low_complexity 1 49 0 4099 194 118 33 chr10 34186431 34187390 -106129375 - Charlie1 DNA MER1_type 0 2761 1885 1990 144 0 0 chr10 34187390 34187681 -106129084 + AluJb SINE Alu 1 291 -21 4099 194 118 33 chr10 34187681 34187729 -106129036 - Charlie1 DNA MER1_type -876 1885 1842 2321 108 0 13 chr10 34187729 34188043 -106128722 + AluSg SINE Alu 1 310 0 4099 194 118 33 chr10 34188043 34188211 -106128554 - Charlie1 DNA MER1_type -919 1842 1485 1110 202 226 48 chr10 34188213 34188791 -106127974 + L1MC4 LINE L1 6261 6359 0 241 182 68 68 chr10 34188866 34188954 -106127811 + L1MC4a LINE L1 6052 6139 -1669 1226 183 128 22 chr10 34188967 34189240 -106127525 - AluJo SINE Alu -8 304 3 1878 139 0 4 chr10 34189273 34189553 -106127212 - AluJo SINE Alu -23 289 11 520 292 119 43 chr10 34189839 34190135 -106126630 - L1M4 LINE L1 -2916 3230 2958 1892 163 3 6 chr10 34190135 34190448 -106126317 - AluJo SINE Alu 0 312 1 520 292 119 43 chr10 34190448 34190662 -106126103 - L1M4 LINE L1 -3188 2958 2681 840 107 0 8 chr10 34190881 34191002 -106125763 - AluSg/x SINE Alu -17 293 174 272 262 49 25 chr10 34191012 34191134 -106125631 - HAL1b LINE L1 -539 809 685 316 244 156 19 chr10 34191187 34191347 -106125418 - L1ME3A LINE L1 -182 6057 5876 4954 257 116 28 chr10 34191377 34191467 -106125298 - L1MEc LINE L1 -1303 4912 4831 1451 110 13 31 chr10 34191467 34191695 -106125070 + MER30 DNA MER1_type 4 227 -3 4954 257 116 28 chr10 34191695 34191852 -106124913 - L1MEc LINE L1 -1384 4831 4689 2419 66 10 0 chr10 34191852 34192157 -106124608 - AluY SINE Alu -3 308 1 4954 257 116 28 chr10 34192157 34194237 -106122528 - L1MEc LINE L1 -1526 4689 2376 2038 125 4 0 chr10 34194237 34194549 -106122216 + AluSx SINE Alu 1 313 0 4954 257 116 28 chr10 34194549 34194756 -106122009 - L1MEc LINE L1 -3839 2376 2189 2798 90 29 0 chr10 34194924 34195334 -106121431 - L1PA13 LINE L1 0 6163 5742 225 0 0 0 chr10 34195447 34195472 -106121293 + (CA)n Simple_repeat Simple_repeat 2 26 0 449 282 148 37 chr10 34195642 34196032 -106120733 - L1MEc LINE L1 -4677 1540 1195 180 0 0 0 chr10 34196032 34196052 -106120713 + (TTA)n Simple_repeat Simple_repeat 2 21 0 449 282 148 37 chr10 34196052 34196460 -106120305 - L1MEc LINE L1 -5022 1195 791 435 204 88 18 chr10 34196535 34196648 -106120117 - L1ME2 LINE L1 -8 6156 6036 466 237 53 0 chr10 34196683 34196835 -106119930 + L1ME1 LINE L1 5733 5892 -274 1955 108 22 4 chr10 34196847 34197163 -106119602 + AluSx SINE Alu 1 321 0 467 327 149 18 chr10 34197236 34197572 -106119193 - L3 LINE CR1 -805 772 393 1998 130 0 0 chr10 34197826 34198152 -106118613 + AluSx SINE Alu 1 326 0 914 155 113 36 chr10 34198428 34198622 -106118143 + MER2 DNA MER2_type 1 209 -136 232 233 100 0 chr10 34198668 34198728 -106118037 + MER2 DNA MER2_type 280 345 0 245 61 0 0 chr10 34199697 34199730 -106117035 + MER63C DNA MER1_type 1 33 -897 2623 181 91 16 chr10 34199778 34200396 -106116369 + MER63C DNA MER1_type 131 794 -136 1889 232 95 54 chr10 34200434 34200784 -106115981 - L1MC5 LINE L1 -455 7506 7172 2516 53 0 3 chr10 34200784 34201088 -106115677 - AluY SINE Alu -8 303 1 1889 232 95 54 chr10 34201088 34201691 -106115074 - L1MC5 LINE L1 -789 7172 6518 22 35 0 0 chr10 34203656 34203685 -106113080 + AT_rich Low_complexity Low_complexity 1 29 0 255 317 0 12 chr10 34203794 34203876 -106112889 + Charlie5 DNA MER1_type 2 82 -2530 2018 61 0 27 chr10 34203876 34204137 -106112628 - AluY SINE Alu -21 290 37 2183 152 77 34 chr10 34204176 34204766 -106111999 - L1MB3 LINE L1 -519 5664 5068 * 2361 140 110 7 chr10 34204759 34205222 -106111543 + L1MB3 LINE L1 5666 6176 -7 257 152 0 22 chr10 34205223 34205269 -106111496 + Charlie5 DNA MER1_type 163 207 -2405 * 267 176 0 20 chr10 34205231 34205282 -106111483 - MER3 DNA MER1_type -123 86 37 362 229 110 28 chr10 34205683 34205792 -106110973 + MIR3 SINE MIR 68 185 -23 1694 164 67 12 chr10 34205850 34206180 -106110585 + MER7A DNA MER2_type 1 346 0 23 0 0 0 chr10 34206648 34206671 -106110094 + GC_rich Low_complexity Low_complexity 1 23 0 2226 88 14 7 chr10 34207531 34207828 -106108937 - AluSq SINE Alu -14 299 1 333 0 0 0 chr10 34208506 34208543 -106108222 + (CA)n Simple_repeat Simple_repeat 1 37 0 418 286 134 52 chr10 34211246 34211477 -106105288 - MIR SINE MIR -9 253 4 482 317 145 38 chr10 34213804 34214148 -106102617 + L2 LINE L2 2918 3298 -15 21 36 0 0 chr10 34214400 34214428 -106102337 + AT_rich Low_complexity Low_complexity 1 28 0 1609 168 58 3 chr10 34214521 34214812 -106101953 - AluJo SINE Alu -5 307 1 2207 107 0 22 chr10 34217690 34218009 -106098756 + AluSx SINE Alu 1 312 0 1350 277 85 9 chr10 34218101 34218664 -106098101 - L1M3 LINE L1 -1125 5021 4416 2052 126 7 7 chr10 34218725 34219026 -106097739 + AluSx SINE Alu 1 301 -11 378 0 0 0 chr10 34219027 34219069 -106097696 + (TG)n Simple_repeat Simple_repeat 2 43 0 957 145 33 0 chr10 34219924 34220076 -106096689 + FRAM SINE Alu 1 157 -9 563 245 14 0 chr10 34221587 34221730 -106095035 + MER103 DNA DNA 21 165 -1 41 0 0 0 chr10 34221979 34222020 -106094745 + AT_rich Low_complexity Low_complexity 1 41 0 909 279 84 43 chr10 34222279 34222766 -106093999 + MLT1H LTR MaLR 43 549 0 544 181 16 8 chr10 34222811 34222938 -106093827 - L1MC2 LINE L1 -2 6342 6215 234 0 0 0 chr10 34223571 34223597 -106093168 + (TA)n Simple_repeat Simple_repeat 1 26 0 516 292 92 24 chr10 34223597 34223847 -106092918 + L1MC/D LINE L1 5426 5692 -2116 654 164 185 14 chr10 34225670 34225816 -106090949 + MER20 DNA MER1_type 19 189 -30 307 269 160 17 chr10 34225962 34226081 -106090684 + L2 LINE L2 3126 3261 -11 186 71 0 0 chr10 34226081 34226109 -106090656 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 21 0 0 0 chr10 34227446 34227467 -106089298 + AT_rich Low_complexity Low_complexity 1 21 0 512 257 73 90 chr10 34228339 34228584 -106088181 + MIR SINE MIR 21 261 -1 183 386 80 31 chr10 34230062 34230225 -106086540 + L2 LINE L2 3087 3257 -15 2561 58 0 6 chr10 34230368 34230679 -106086086 + AluY SINE Alu 1 309 -2 278 228 74 34 chr10 34231079 34231228 -106085537 - L1MEd LINE L1 -3866 2263 2109 814 204 65 48 chr10 34231493 34231723 -106085042 + Charlie1 DNA MER1_type 1708 1941 -820 2236 96 0 0 chr10 34231728 34232039 -106084726 + AluSx SINE Alu 1 311 0 1458 179 65 10 chr10 34232045 34232353 -106084412 + L1MB2 LINE L1 5843 6167 -4 2810 199 102 21 chr10 34232353 34233126 -106083639 + Charlie1 DNA MER1_type 1925 2760 -1 501 255 117 77 chr10 34233585 34234141 -106082624 + L1MC4a LINE L1 5296 5873 -1935 370 311 92 0 chr10 34236835 34236999 -106079766 + MIR SINE MIR 83 261 -1 668 313 30 27 chr10 34237116 34237522 -106079243 - L1M4 LINE L1 -867 5279 4873 1018 206 0 5 chr10 34237570 34237764 -106079001 - AluJo SINE Alu -20 292 100 440 280 170 42 chr10 34237874 34238498 -106078267 - L1M4 LINE L1 -1445 4701 3998 1975 166 0 0 chr10 34238532 34238834 -106077931 + AluSx SINE Alu 3 304 -8 4998 200 102 33 chr10 34238835 34240485 -106076280 - L1MDb LINE L1 -3899 2507 749 225 256 48 104 chr10 34240990 34241115 -106075650 - MLT1H LTR MaLR -203 346 229 478 280 38 40 chr10 34241299 34241609 -106075156 - L1MEd LINE L1 -1033 1457 1048 2116 99 49 0 chr10 34241818 34242102 -106074663 + AluSg SINE Alu 1 298 -12 25 51 0 0 chr10 34243239 34243278 -106073487 + AT_rich Low_complexity Low_complexity 1 39 0 24 0 0 0 chr10 34244131 34244155 -106072610 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr10 34245645 34245668 -106071097 + AT_rich Low_complexity Low_complexity 1 23 0 2076 76 60 33 chr10 34245754 34246055 -106070710 - AluSp SINE Alu -4 309 1 805 147 0 0 chr10 34247874 34247990 -106068775 + FLAM_C SINE Alu 1 116 -17 365 70 18 0 chr10 34248013 34248070 -106068695 + (GGA)n Simple_repeat Simple_repeat 3 60 0 22 0 0 0 chr10 34249401 34249423 -106067342 + AT_rich Low_complexity Low_complexity 1 22 0 252 354 121 39 chr10 34249445 34250084 -106066681 + L1MEd LINE L1 134 824 -5295 405 238 78 122 chr10 34250088 34250521 -106066244 + L1MC4 LINE L1 7625 8038 -4 427 276 91 41 chr10 34250643 34251122 -106065643 + L1MEd LINE L1 1065 1608 -4702 1751 166 3 7 chr10 34251153 34251436 -106065329 + AluJo SINE Alu 1 282 -30 602 197 0 57 chr10 34251668 34251790 -106064975 + FLAM_A SINE Alu 1 115 -18 541 173 55 9 chr10 34251791 34251901 -106064864 - MER20 DNA MER1_type -88 131 17 740 276 180 43 chr10 34251972 34252571 -106064194 + HAL1 LINE L1 44 724 -1783 830 184 24 12 chr10 34252605 34252773 -106063992 + HAL1 LINE L1 1544 1713 -794 2006 101 83 0 chr10 34253025 34253303 -106063462 - AluSx SINE Alu -11 301 1 1293 174 114 23 chr10 34254030 34254294 -106062471 + AluJo SINE Alu 1 288 -24 632 282 41 12 chr10 34255131 34255301 -106061464 + MIR3 SINE MIR 28 202 -6 22 0 0 0 chr10 34255608 34255630 -106061135 + AT_rich Low_complexity Low_complexity 1 22 0 851 209 47 28 chr10 34255798 34255928 -106060837 - MER20 DNA MER1_type 0 219 82 462 18 0 0 chr10 34255928 34255983 -106060782 + (CA)n Simple_repeat Simple_repeat 1 55 0 851 209 47 28 chr10 34255983 34256067 -106060698 - MER20 DNA MER1_type -137 82 1 342 283 138 13 chr10 34256773 34256932 -106059833 + L1M4 LINE L1 3599 3777 -2369 328 257 20 0 chr10 34257006 34257107 -106059658 + L1M4 LINE L1 3890 3992 -2154 223 295 33 0 chr10 34257754 34257815 -106058950 + L2 LINE L2 3250 3312 -1 226 325 148 48 chr10 34258401 34258825 -106057940 - L2 LINE L2 -557 2757 2231 2328 74 0 10 chr10 34258825 34259124 -106057641 + AluY SINE Alu 1 296 -15 226 325 148 48 chr10 34259124 34259213 -106057552 - L2 LINE L2 -1083 2231 2152 427 310 101 12 chr10 34259525 34259783 -106056982 + L1MEc LINE L1 34 314 -6082 2156 84 3 20 chr10 34259852 34260148 -106056617 - AluSp SINE Alu -20 293 3 674 135 0 0 chr10 34260336 34260440 -106056325 - AluSg/x SINE Alu -2 307 204 551 271 152 20 chr10 34260812 34261111 -106055654 + L1ME LINE L1 5489 5780 -341 2083 103 17 10 chr10 34261149 34261440 -106055325 + AluSx SINE Alu 1 293 -19 239 138 138 35 chr10 34261774 34261832 -106054933 - MER5A DNA MER1_type -24 165 102 1660 152 67 0 chr10 34261885 34262155 -106054610 + AluJo SINE Alu 1 288 -24 1981 144 0 0 chr10 34262486 34262792 -106053973 + AluSx SINE Alu 1 306 0 2177 105 7 3 chr10 34263454 34263760 -106053005 - AluSp SINE Alu -6 307 1 24 0 0 0 chr10 34263760 34263784 -106052981 + AT_rich Low_complexity Low_complexity 1 24 0 215 352 59 73 chr10 34264145 34264432 -106052333 - L2 LINE L2 -44 3228 2946 305 355 65 0 chr10 34265274 34265398 -106051367 + L2 LINE L2 3136 3267 -5 188 328 139 34 chr10 34265439 34266065 -106050700 + L2 LINE L2 2167 2858 -456 1589 182 75 0 chr10 34266288 34266646 -106050119 - Charlie5 DNA MER1_type 0 2618 2234 534 172 40 8 chr10 34266640 34266778 -106049987 - Charlie5 DNA MER1_type -2496 116 1 * 221 366 24 24 chr10 34266791 34266873 -106049892 + L2 LINE L2 3137 3218 -54 2363 97 0 0 chr10 34267925 34268234 -106048531 + AluSx SINE Alu 3 311 -1 2687 128 103 8 chr10 34268899 34269393 -106047372 - L1MB3 LINE L1 -6 6177 5637 1881 139 33 3 chr10 34269467 34269770 -106046995 + AluSx SINE Alu 1 312 0 1421 183 103 0 chr10 34271041 34271314 -106045451 + AluJb SINE Alu 1 301 -11 493 290 112 23 chr10 34271560 34271774 -106044991 + Tigger8 DNA MER2_type 25 257 -409 1081 209 32 18 chr10 34271838 34272058 -106044707 + MER58A DNA MER1_type 2 224 0 1515 154 108 4 chr10 34272360 34272619 -106044146 + AluJb SINE Alu 1 286 -26 28 48 0 0 chr10 34272703 34272745 -106044020 + AT_rich Low_complexity Low_complexity 1 42 0 265 366 0 0 chr10 34273288 34273370 -106043395 + L2 LINE L2 3191 3272 0 761 188 8 0 chr10 34273560 34273688 -106043077 + FLAM_C SINE Alu 3 131 -12 1267 172 35 18 chr10 34274016 34274243 -106042522 + AluJb SINE Alu 1 231 -81 325 200 0 0 chr10 34274293 34274348 -106042417 - AluJb SINE Alu -89 213 159 201 74 0 0 chr10 34274380 34274407 -106042358 + (A)n Simple_repeat Simple_repeat 1 27 0 207 286 14 71 chr10 34274892 34274962 -106041803 - MIR SINE MIR -196 66 1 2461 11 0 0 chr10 34275147 34275415 -106041350 - AluYa5 SINE Alu -13 298 31 2193 125 0 6 chr10 34275764 34276075 -106040690 + AluSg SINE Alu 1 309 -1 2375 88 3 0 chr10 34276245 34276540 -106040225 + AluSp SINE Alu 1 296 -17 1843 169 0 10 chr10 34276945 34277246 -106039519 - AluJb SINE Alu -14 298 1 23 33 0 0 chr10 34277325 34277355 -106039410 + AT_rich Low_complexity Low_complexity 1 30 0 2870 154 113 92 chr10 34277404 34278187 -106038578 - Charlie1 DNA MER1_type -63 2698 1892 800 124 8 0 chr10 34278187 34278308 -106038457 - L1MA1 LINE L1 0 6302 6181 2870 154 113 92 chr10 34278308 34278414 -106038351 - Charlie1 DNA MER1_type -869 1892 1790 2175 121 0 0 chr10 34278768 34279065 -106037700 + AluSx SINE Alu 1 297 -15 1774 170 13 113 chr10 34280217 34280677 -106036088 - MLT2D LTR ERVL 0 414 1 185 259 103 35 chr10 34280789 34280847 -106035918 - L2 LINE L2 -87 3185 3124 2512 72 0 0 chr10 34280882 34281188 -106035577 - AluY SINE Alu -5 306 1 349 260 66 77 chr10 34281748 34281944 -106034821 + MLT1K LTR MaLR 395 588 0 2246 101 0 7 chr10 34282147 34282443 -106034322 - AluSx SINE Alu -18 294 1 1644 136 163 0 chr10 34282851 34283115 -106033650 - AluSx SINE Alu -5 307 1 281 245 68 30 chr10 34283343 34283453 -106033312 - MIR SINE MIR -62 146 46 5361 86 5 0 chr10 34284522 34285294 -106031471 - L1PA5 LINE L1 -4202 1944 1169 * 26284 40 8 0 chr10 34285292 34289475 -106027290 + L1PA5 LINE L1 1938 6146 -8 26 0 0 0 chr10 34289475 34289501 -106027264 + AT_rich Low_complexity Low_complexity 1 26 0 2420 248 58 60 chr10 34289995 34291075 -106025690 + L1MCb LINE L1 2 1079 -4966 1815 163 7 0 chr10 34291075 34291357 -106025408 + AluJb SINE Alu 1 284 -28 1320 187 37 0 chr10 34291376 34291694 -106025071 + L1MB8 LINE L1 5216 5543 -641 646 81 11 0 chr10 34291694 34291781 -106024984 - AluSc SINE Alu -221 88 1 1698 138 48 0 chr10 34291799 34292089 -106024676 + MER7A DNA MER2_type 1 302 -44 1205 171 74 24 chr10 34292100 34292436 -106024329 + L1MB8 LINE L1 5679 6028 -156 745 226 14 5 chr10 34292435 34292647 -106024118 + L1M4 LINE L1 4456 4669 -1477 * 310 293 155 56 chr10 34292851 34293083 -106023682 - L2 LINE L2 -190 3082 2828 258 365 88 19 chr10 34293081 34293240 -106023525 - L2 LINE L2 -640 2674 2505 * 338 318 143 16 chr10 34293301 34293397 -106023368 + L2 LINE L2 3014 3096 -217 1994 169 46 3 chr10 34293397 34293747 -106023018 + MLT1A1 LTR MaLR 1 365 0 338 318 143 16 chr10 34293747 34293908 -106022857 + L2 LINE L2 3096 3304 -9 2357 104 0 0 chr10 34294084 34294391 -106022374 + AluSg1 SINE Alu 1 307 -2 998 169 36 64 chr10 34294939 34295188 -106021577 + L1MB5 LINE L1 5925 6166 -8 637 329 55 88 chr10 34297024 34297565 -106019200 - L2 LINE L2 0 3272 2758 1468 153 0 118 chr10 34297565 34297713 -106019052 + AluJo SINE Alu 1 88 -224 2262 118 0 3 chr10 34297713 34298017 -106018748 + AluSx SINE Alu 1 303 -9 1468 153 0 118 chr10 34298017 34298208 -106018557 + AluJo SINE Alu 88 300 -12 637 329 55 88 chr10 34298208 34298227 -106018538 - L2 LINE L2 -514 2758 2740 25 31 0 0 chr10 34298530 34298562 -106018203 + AT_rich Low_complexity Low_complexity 1 32 0 224 254 15 0 chr10 34300321 34300388 -106016377 + (TA)n Simple_repeat Simple_repeat 1 68 0 1886 165 19 80 chr10 34300528 34300953 -106015812 + MER47B DNA MER2_type 20 418 0 326 336 9 0 chr10 34302969 34303082 -106013683 + MIR SINE MIR 83 196 -66 2216 99 0 13 chr10 34303284 34303588 -106013177 - AluSg SINE Alu -10 300 1 333 0 0 0 chr10 34304012 34304049 -106012716 + (TA)n Simple_repeat Simple_repeat 2 38 0 742 148 9 0 chr10 34304049 34304164 -106012601 - FLAM_C SINE Alu -17 116 1 2105 174 47 20 chr10 34304596 34304670 -106012095 - MER65C LTR ERV1 0 461 390 306 0 0 0 chr10 34304670 34304704 -106012061 + (TA)n Simple_repeat Simple_repeat 2 35 0 2105 174 47 20 chr10 34304704 34305078 -106011687 - MER65C LTR ERV1 -71 390 1 2083 135 0 3 chr10 34305098 34305387 -106011378 - AluSx SINE Alu -24 288 1 1751 170 0 24 chr10 34306008 34306328 -106010437 - AluJo SINE Alu 0 313 1 780 250 79 29 chr10 34306586 34306902 -106009863 - L1MC4a LINE L1 -1905 5903 5572 21 57 0 0 chr10 34306938 34306973 -106009792 + AT_rich Low_complexity Low_complexity 1 35 0 399 281 25 33 chr10 34307054 34307175 -106009590 - L2 LINE L2 -4 3309 3190 340 306 96 94 chr10 34308490 34309137 -106007628 + L1M2 LINE L1 458 1105 -5744 308 314 81 78 chr10 34309094 34309355 -106007410 - L1M2 LINE L1 -5596 1253 989 * 189 0 0 0 chr10 34309355 34309376 -106007389 + (CGG)n Simple_repeat Simple_repeat 3 23 0 308 314 81 78 chr10 34309376 34309461 -106007304 - L1M2 LINE L1 -5860 989 906 21 0 0 0 chr10 34309556 34309577 -106007188 + GC_rich Low_complexity Low_complexity 1 21 0 289 251 14 0 chr10 34309587 34309737 -106007028 + (TG)n Simple_repeat Simple_repeat 1 152 0 247 158 0 0 chr10 34311764 34311802 -106004963 - MER5A DNA MER1_type -1 188 151 716 193 77 42 chr10 34311858 34312117 -106004648 - MER33 DNA MER1_type -4 320 53 341 321 102 7 chr10 34312168 34312305 -106004460 + MER5A DNA MER1_type 1 150 -39 1247 171 41 4 chr10 34312306 34312575 -106004190 + L1MC3 LINE L1 7507 7785 0 668 264 72 10 chr10 34312718 34312911 -106003854 - MIR SINE MIR 0 262 58 303 298 53 21 chr10 34313080 34313174 -106003591 - MIR SINE MIR -146 116 20 21 0 0 0 chr10 34313262 34313283 -106003482 + AT_rich Low_complexity Low_complexity 1 21 0 535 194 54 0 chr10 34313303 34313432 -106003333 + L1ME1 LINE L1 5778 5913 -253 1322 191 110 3 chr10 34313585 34313921 -106002844 - L1ME LINE L1 -379 5787 5416 636 168 24 60 chr10 34313938 34313959 -106002806 - L1MA10 LINE L1 0 6334 6314 2277 226 82 34 chr10 34313959 34314757 -106002008 - L1ME1 LINE L1 -9 6157 5322 1629 205 3 16 chr10 34314759 34315066 -106001699 - AluJo SINE Alu -9 303 1 753 188 128 15 chr10 34315074 34315340 -106001425 - L1ME1 LINE L1 -2451 3695 3400 1189 113 0 18 chr10 34315341 34315509 -106001256 + FRAM SINE Alu 1 162 -14 293 270 51 0 chr10 34315509 34315646 -106001119 - L1ME1 LINE L1 -2744 3402 3259 4167 196 52 36 chr10 34315773 34317219 -105999546 + L1MC3 LINE L1 4744 6166 20 1981 139 13 7 chr10 34317219 34317529 -105999236 + AluSx SINE Alu 1 312 0 1894 152 7 16 chr10 34317535 34317844 -105998921 + AluSx SINE Alu 1 306 -6 4167 196 52 36 chr10 34317844 34318030 -105998735 + L1MC3 LINE L1 5221 5403 -743 1100 192 105 19 chr10 34318032 34318355 -105998410 - MLT1D LTR MaLR -154 351 1 1154 218 26 54 chr10 34318355 34318679 -105998086 + L1M4 LINE L1 4675 4988 -1158 1644 209 17 0 chr10 34318679 34318971 -105997794 + AluJo SINE Alu 1 297 -15 1154 218 26 54 chr10 34318971 34319036 -105997729 + L1M4 LINE L1 4988 5053 -1093 1382 201 25 22 chr10 34319056 34319370 -105997395 + MLT2D LTR ERVL 1 315 -99 1799 165 55 0 chr10 34319370 34319697 -105997068 - MER7A DNA MER2_type -3 343 1 232 253 13 0 chr10 34319759 34319834 -105996931 + L1M4 LINE L1 5086 5161 -985 4851 161 24 30 chr10 34319838 34320926 -105995839 + L1MD1 LINE L1 5089 6175 -67 1940 153 0 3 chr10 34320926 34321213 -105995552 - AluJb SINE Alu -26 286 1 4851 161 24 30 chr10 34321213 34321281 -105995484 + L1MD1 LINE L1 6175 6242 0 243 189 19 0 chr10 34321377 34321430 -105995335 + L1ME3 LINE L1 6067 6120 -42 21 0 0 0 chr10 34321459 34321480 -105995285 + AT_rich Low_complexity Low_complexity 1 21 0 769 169 0 0 chr10 34321545 34321669 -105995096 - FLAM_A SINE Alu -7 135 12 354 348 57 16 chr10 34321693 34321940 -105994825 - L2 LINE L2 -1396 1918 1662 641 248 139 12 chr10 34322187 34322631 -105994134 + MLT1F LTR MaLR 1 542 0 371 232 136 32 chr10 34322657 34322782 -105993983 - MIR SINE MIR -117 145 8 267 319 62 57 chr10 34322798 34323008 -105993757 - L2 LINE L2 -1883 1431 1221 1760 171 10 29 chr10 34323625 34323934 -105992831 + AluJb SINE Alu 1 303 -9 1813 168 25 68 chr10 34325714 34325897 -105990868 + MLT1C LTR MaLR 1 190 -277 1903 182 0 0 chr10 34325897 34326193 -105990572 + AluJb SINE Alu 5 300 -12 1813 168 25 68 chr10 34326193 34326497 -105990268 + MLT1C LTR MaLR 190 467 0 2101 110 14 0 chr10 34327290 34327603 -105989162 - AluSx SINE Alu 0 317 1 1588 186 21 0 chr10 34327609 34327889 -105988876 - AluJb SINE Alu -26 286 1 751 254 92 25 chr10 34327889 34328216 -105988549 + L1MC4 LINE L1 7295 7643 -399 364 262 14 90 chr10 34328216 34328361 -105988404 + L2 LINE L2 2308 2441 -873 691 189 0 0 chr10 34329195 34329322 -105987443 - L1 LINE L1 -886 5260 5134 294 241 0 23 chr10 34329946 34330033 -105986732 + GA-rich Low_complexity Low_complexity 2 86 0 887 197 23 14 chr10 34330455 34330673 -105986092 - L1 LINE L1 -1000 5146 4927 4772 164 21 16 chr10 34330686 34331384 -105985381 + L1MA8 LINE L1 5255 5961 -330 2403 84 3 0 chr10 34331384 34331683 -105985082 + AluSp SINE Alu 1 300 -13 4772 164 21 16 chr10 34331683 34331981 -105984784 + L1MA8 LINE L1 5961 6256 -35 2203 100 0 0 chr10 34332905 34333194 -105983571 - AluSg SINE Alu -21 289 1 2106 123 7 3 chr10 34333407 34333708 -105983057 + AluSc SINE Alu 1 302 -7 278 75 25 0 chr10 34334117 34334157 -105982608 + L1P LINE L1 5322 5362 -794 316 218 0 0 chr10 34334157 34334212 -105982553 + Tigger5 DNA MER2_type 1 55 -2268 1356 144 9 19 chr10 34334234 34334449 -105982316 - AluJo SINE Alu -13 299 87 462 226 0 0 chr10 34334452 34334536 -105982229 + Tigger5 DNA MER2_type 2240 2323 0 297 0 0 0 chr10 34334665 34334698 -105982067 + (CA)n Simple_repeat Simple_repeat 1 33 0 4303 147 21 31 chr10 34334698 34334758 -105982007 + L1MB3 LINE L1 5435 5494 -689 1645 193 3 14 chr10 34334758 34335054 -105981711 + AluJo SINE Alu 1 293 -19 4303 147 21 31 chr10 34335054 34335737 -105981028 + L1MB3 LINE L1 5494 6171 -12 2316 83 6 13 chr10 34335847 34336160 -105980605 + AluY SINE Alu 1 311 0 2156 81 39 0 chr10 34336173 34336456 -105980309 + AluSg SINE Alu 1 294 -16 2368 88 3 0 chr10 34336507 34336813 -105979952 + AluSg SINE Alu 1 307 -3 334 217 125 120 chr10 34336951 34337135 -105979630 + L1MC/D LINE L1 5418 5602 -757 1613 215 52 67 chr10 34337142 34337331 -105979434 + L1M4 LINE L1 2720 2910 -3236 1539 157 37 33 chr10 34337331 34337630 -105979135 + AluJb SINE Alu 1 300 -12 1613 215 52 67 chr10 34337630 34337820 -105978945 + L1M4 LINE L1 2910 3101 -3045 2393 94 0 0 chr10 34337820 34338127 -105978638 + AluSg SINE Alu 1 307 -3 1613 215 52 67 chr10 34338127 34338246 -105978519 + L1M4 LINE L1 3101 3211 -2935 1720 159 40 13 chr10 34338246 34338548 -105978217 + AluJb SINE Alu 3 312 0 1613 215 52 67 chr10 34338548 34338656 -105978109 + L1M4 LINE L1 3211 3319 -2827 406 269 20 67 chr10 34338874 34339023 -105977742 + MIR3 SINE MIR 60 201 -7 256 211 113 0 chr10 34339169 34339240 -105977525 - MIR SINE MIR -94 168 90 644 184 64 0 chr10 34339276 34339401 -105977364 - FLAM_C SINE Alu 0 133 1 916 133 0 22 chr10 34339540 34339675 -105977090 - FLAM_C SINE Alu -1 132 1 892 278 92 44 chr10 34340214 34340787 -105975978 + L1ME4a LINE L1 5301 5901 -220 2328 93 0 7 chr10 34340884 34341186 -105975579 - AluSp SINE Alu -13 300 1 1643 98 5 0 chr10 34341576 34341790 -105974975 - AluSp SINE Alu -3 310 96 1589 139 6 104 chr10 34341791 34342136 -105974629 - AluJb SINE Alu -1 311 1 1809 150 37 10 chr10 34343206 34343500 -105973265 - AluJb SINE Alu -10 302 1 809 200 0 0 chr10 34343829 34343954 -105972811 + FLAM_C SINE Alu 2 126 -17 28 48 0 0 chr10 34343954 34343996 -105972769 + AT_rich Low_complexity Low_complexity 1 42 0 234 245 0 0 chr10 34344005 34344058 -105972707 + L1MC4 LINE L1 7546 7598 -444 2338 100 0 13 chr10 34344064 34344374 -105972391 + AluSx SINE Alu 1 306 -6 748 148 0 0 chr10 34344389 34344504 -105972261 - MLT1A1 LTR MaLR -6 359 245 886 157 0 63 chr10 34344515 34344674 -105972091 + FRAM SINE Alu 10 158 -18 654 222 5 7 chr10 34344696 34344901 -105971864 - MLT1A1 LTR MaLR -106 259 5 633 242 138 41 chr10 34344921 34344955 -105971810 + L1MC4 LINE L1 7613 7642 -400 2432 59 0 16 chr10 34344955 34345262 -105971503 - AluY SINE Alu -9 302 1 633 242 138 41 chr10 34345262 34345462 -105971303 + L1MC4 LINE L1 7642 7821 -221 2264 92 0 7 chr10 34345462 34345757 -105971008 - AluSp SINE Alu -20 293 1 633 242 138 41 chr10 34345757 34345913 -105970852 + L1MC4 LINE L1 7821 8042 0 1043 209 43 8 chr10 34346105 34346339 -105970426 + L1MEc LINE L1 22 263 -6133 * 1049 276 138 33 chr10 34346334 34347096 -105969669 + L1MEc LINE L1 837 1678 -4718 3931 145 87 5 chr10 34347123 34347780 -105968985 - MER50 LTR ERV1 -23 711 1 2652 85 17 3 chr10 34347780 34348133 -105968632 - MER50-int LTR ERV1 -8 7197 6840 * 6153 121 9 30 chr10 34348127 34349110 -105967655 - MER50-int LTR ERV1 -1000 6205 5243 1644 151 176 22 chr10 34349111 34349475 -105967290 + MSTA LTR MaLR 1 420 -8 9650 126 12 37 chr10 34349481 34351051 -105965714 + MSTA-int LTR MaLR 3 1533 -47 1339 152 18 13 chr10 34351051 34351275 -105965490 - AluSg/x SINE Alu -10 302 78 1813 177 138 26 chr10 34351317 34351702 -105965063 + MSTA LTR MaLR 1 428 0 3734 129 32 32 chr10 34351702 34352156 -105964609 - MER50-int LTR ERV1 -1071 5223 4782 2349 119 0 0 chr10 34352156 34352466 -105964299 - AluSq SINE Alu -3 310 1 3734 129 32 32 chr10 34352466 34352637 -105964128 - MER50-int LTR ERV1 -1512 4782 4612 2190 104 0 13 chr10 34352637 34352936 -105963829 - AluSg SINE Alu -15 295 1 670 97 97 0 chr10 34352936 34353039 -105963726 - AluSg/x SINE Alu -3 309 197 1379 110 0 6 chr10 34353081 34353263 -105963502 - AluSc SINE Alu -89 220 40 273 128 0 0 chr10 34353264 34353303 -105963462 - MER50-int LTR ERV1 -3184 4353 4315 2167 119 7 0 chr10 34353303 34353613 -105963152 - AluSx SINE Alu 0 312 1 473 256 6 44 chr10 34354994 34355154 -105961611 + L2 LINE L2 2205 2358 -956 562 265 133 27 chr10 34355186 34355480 -105961285 - MER46C DNA MER2_type -6 332 8 434 295 176 4 chr10 34355515 34355759 -105961006 + L1ME LINE L1 5254 5539 -2269 224 206 0 73 chr10 34355760 34355828 -105960937 + MIR SINE MIR 195 257 -5 442 259 38 71 chr10 34355835 34355895 -105960870 + L1ME LINE L1 5536 5596 -525 2370 92 0 0 chr10 34355895 34356189 -105960576 - AluSp SINE Alu -19 294 1 442 259 38 71 chr10 34356189 34356340 -105960425 + L1ME LINE L1 5596 5740 -381 485 206 19 0 chr10 34356469 34356576 -105960189 - MLT1L LTR MaLR -342 273 165 817 149 91 26 chr10 34356626 34356780 -105959985 + FRAM SINE Alu 1 155 -21 1169 195 129 33 chr10 34356786 34356876 -105959889 - Charlie1 DNA MER1_type -51 2710 2630 2239 121 0 3 chr10 34356876 34357183 -105959582 + AluSg SINE Alu 1 306 -4 1169 195 129 33 chr10 34357183 34357425 -105959340 - Charlie1 DNA MER1_type -131 2630 2346 2011 151 3 0 chr10 34357482 34357781 -105958984 - AluJb SINE Alu -12 300 1 590 288 63 54 chr10 34357978 34358043 -105958722 + L2 LINE L2 2647 2710 -603 3989 162 28 35 chr10 34358043 34358091 -105958674 - L1MB3 LINE L1 -3 6180 6133 2408 89 0 0 chr10 34358091 34358394 -105958371 - AluSx SINE Alu -3 309 7 3989 162 28 35 chr10 34358394 34359087 -105957678 - L1MB3 LINE L1 -50 6133 5444 590 288 63 54 chr10 34359087 34359434 -105957331 + L2 LINE L2 2710 3064 -249 606 226 0 16 chr10 34359452 34359576 -105957189 - L2 LINE L2 -7 3306 3185 452 95 0 54 chr10 34360234 34360308 -105956457 - FLAM_A SINE Alu -5 137 68 1889 52 0 4 chr10 34360308 34360539 -105956226 - LTR9 LTR ERV1 -382 230 1 2229 187 74 4 chr10 34360591 34361120 -105955645 - Charlie1 DNA MER1_type -64 2697 2132 356 230 14 14 chr10 34361102 34361176 -105955589 - Charlie1 DNA MER1_type -2681 80 7 * 250 276 68 98 chr10 34361179 34361342 -105955423 + L2 LINE L2 3155 3312 -1 2014 152 19 0 chr10 34361702 34362011 -105954754 + 7SLRNA srpRNA srpRNA 1 315 -5 233 242 185 70 chr10 34362237 34362325 -105954440 + MER5A DNA MER1_type 9 86 -103 2271 226 66 35 chr10 34362325 34362901 -105953864 + MLT1G1 LTR MaLR 2 595 0 233 242 185 70 chr10 34362901 34362969 -105953796 + MER5A DNA MER1_type 86 183 -6 1575 158 10 59 chr10 34362989 34363293 -105953472 - AluJo SINE Alu -23 289 1 1116 85 0 14 chr10 34364001 34364142 -105952623 + AluSq/x SINE Alu 1 139 -174 965 88 0 22 chr10 34364255 34364391 -105952374 + AluSg/x SINE Alu 170 302 -10 1812 156 11 11 chr10 34364425 34364707 -105952058 - AluSx SINE Alu -21 291 10 544 287 32 6 chr10 34364745 34364902 -105951863 + MER34 LTR ERV1 97 257 -285 1721 129 129 4 chr10 34364902 34365027 -105951738 + AluSx SINE Alu 2 110 -202 216 0 0 0 chr10 34365027 34365051 -105951714 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1721 129 129 4 chr10 34365051 34365197 -105951568 + AluSx SINE Alu 110 307 -5 921 134 0 107 chr10 34365197 34365384 -105951381 + AluJb SINE Alu 137 303 -9 608 225 66 11 chr10 34365473 34365534 -105951231 + MER31-int LTR ERV1 1561 1617 -3254 1673 162 17 30 chr10 34365534 34365831 -105950934 + AluJb SINE Alu 1 293 -19 608 225 66 11 chr10 34365831 34365951 -105950814 + MER31-int LTR ERV1 1617 1752 -3119 1078 164 61 23 chr10 34365954 34366168 -105950597 + AluJo SINE Alu 85 306 -6 963 180 28 92 chr10 34366178 34366650 -105950115 + MER31-int LTR ERV1 1117 2104 -2767 470 207 39 101 chr10 34366715 34366923 -105949842 + MER31-int LTR ERV1 3548 3742 -2856 578 179 20 139 chr10 34366977 34367110 -105949655 + MER31-int LTR ERV1 3731 3822 -2776 1881 130 49 36 chr10 34367110 34367149 -105949616 - AluSx SINE Alu 0 312 275 213 39 0 0 chr10 34367149 34367175 -105949590 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1881 130 49 36 chr10 34367175 34367443 -105949322 - AluSx SINE Alu -37 275 1 578 179 20 139 chr10 34367443 34367560 -105949205 + MER31-int LTR ERV1 3822 3951 -2647 2364 73 13 19 chr10 34367642 34367955 -105948810 - AluY SINE Alu 0 311 1 2290 99 17 0 chr10 34367957 34368249 -105948516 - AluSx SINE Alu -15 297 1 1782 179 3 3 chr10 34368251 34368547 -105948218 - AluJb SINE Alu -16 296 1 488 262 33 22 chr10 34368547 34368730 -105948035 + MER31-int LTR ERV1 2637 2821 -2115 421 209 96 17 chr10 34368733 34368848 -105947917 + MER65C LTR ERV1 338 461 0 431 248 22 44 chr10 34369172 34369309 -105947456 + L1ME4a LINE L1 4007 4140 -2006 387 197 102 22 chr10 34369627 34369764 -105947001 + LTR33 LTR ERVL 374 521 0 2106 120 3 3 chr10 34371385 34371685 -105945080 + AluSp SINE Alu 14 313 0 1844 164 13 0 chr10 34371707 34372005 -105944760 + AluSx SINE Alu 1 302 -10 862 139 0 36 chr10 34372332 34372469 -105944296 + FLAM_C SINE Alu 2 133 0 2208 93 0 14 chr10 34373045 34373335 -105943430 - AluSq SINE Alu -15 298 13 406 269 20 67 chr10 34373485 34373634 -105943131 + MIR3 SINE MIR 60 201 -7 256 211 113 0 chr10 34373780 34373851 -105942914 - MIR SINE MIR -94 168 90 644 184 64 0 chr10 34373887 34374012 -105942753 - FLAM_C SINE Alu 0 133 1 916 133 0 22 chr10 34374151 34374286 -105942479 - FLAM_C SINE Alu -1 132 1 892 278 92 44 chr10 34374825 34375398 -105941367 + L1ME4a LINE L1 5301 5901 -220 2315 96 0 7 chr10 34375495 34375797 -105940968 - AluSp SINE Alu -13 300 1 1654 98 5 0 chr10 34376184 34376399 -105940366 - AluSp SINE Alu -3 310 95 1603 136 6 104 chr10 34376399 34376744 -105940021 - AluJb SINE Alu -1 311 1 1809 150 37 10 chr10 34377814 34378108 -105938657 - AluJb SINE Alu -10 302 1 809 200 0 0 chr10 34378437 34378562 -105938203 + FLAM_C SINE Alu 2 126 -17 28 48 0 0 chr10 34378562 34378604 -105938161 + AT_rich Low_complexity Low_complexity 1 42 0 234 245 0 0 chr10 34378613 34378666 -105938099 + L1MC4 LINE L1 7546 7598 -444 2234 106 0 13 chr10 34378672 34378973 -105937792 + AluSx SINE Alu 1 297 -15 654 191 0 0 chr10 34378988 34379103 -105937662 - MLT1A1 LTR MaLR -6 359 245 876 163 0 62 chr10 34379113 34379273 -105937492 + FRAM SINE Alu 9 158 -18 654 222 5 7 chr10 34379295 34379500 -105937265 - MLT1A1 LTR MaLR -106 259 5 633 242 138 41 chr10 34379520 34379554 -105937211 + L1MC4 LINE L1 7613 7642 -400 2432 59 0 16 chr10 34379554 34379861 -105936904 - AluY SINE Alu -9 302 1 633 242 138 41 chr10 34379861 34380061 -105936704 + L1MC4 LINE L1 7642 7821 -221 2249 95 0 7 chr10 34380061 34380356 -105936409 - AluSp SINE Alu -20 293 1 633 242 138 41 chr10 34380356 34380512 -105936253 + L1MC4 LINE L1 7821 8042 0 1043 209 43 8 chr10 34380704 34380938 -105935827 + L1MEc LINE L1 22 263 -6133 * 1049 276 138 33 chr10 34380933 34381695 -105935070 + L1MEc LINE L1 837 1678 -4718 3942 143 87 5 chr10 34381722 34382379 -105934386 - MER50 LTR ERV1 -23 711 1 2652 85 17 3 chr10 34382379 34382732 -105934033 - MER50-int LTR ERV1 -8 7197 6840 * 6168 120 9 30 chr10 34382726 34383709 -105933056 - MER50-int LTR ERV1 -1000 6205 5243 1670 148 176 22 chr10 34383710 34384074 -105932691 + MSTA LTR MaLR 1 420 -8 9628 126 12 33 chr10 34384078 34385650 -105931115 + MSTA-int LTR MaLR 1 1533 -47 1345 152 18 13 chr10 34385650 34385874 -105930891 - AluSg/x SINE Alu -10 300 76 1684 174 138 26 chr10 34385916 34386301 -105930464 + MSTA LTR MaLR 1 428 0 3658 132 32 32 chr10 34386301 34386755 -105930010 - MER50-int LTR ERV1 -1071 5223 4782 2360 119 0 0 chr10 34386755 34387065 -105929700 - AluSq SINE Alu -3 310 1 3658 132 32 32 chr10 34387065 34387236 -105929529 - MER50-int LTR ERV1 -1512 4782 4612 2210 104 0 13 chr10 34387236 34387535 -105929230 - AluSg SINE Alu -15 295 1 638 97 97 0 chr10 34387535 34387638 -105929127 - AluSg/x SINE Alu -3 306 194 1422 104 0 6 chr10 34387680 34387862 -105928903 - AluSc SINE Alu -89 220 40 1581 156 19 13 chr10 34387863 34387915 -105928850 - MER50-int LTR ERV1 -1642 3656 3606 2129 136 0 0 chr10 34387915 34388210 -105928555 - AluSx SINE Alu -12 300 6 1581 156 19 13 chr10 34388210 34388460 -105928305 - MER50-int LTR ERV1 -1692 3606 2921 1045 98 8 0 chr10 34388460 34388592 -105928173 - AluSq/x SINE Alu -180 133 1 3403 129 18 20 chr10 34388592 34389238 -105927527 - MER50-int LTR ERV1 -804 4076 3391 2858 138 62 4 chr10 34389238 34389689 -105927076 - MER50-int LTR ERV1 -3399 1481 1005 6390 142 41 11 chr10 34389787 34390534 -105926231 - MER50-int LTR ERV1 -5355 1850 1126 2291 93 0 0 chr10 34390534 34390842 -105925923 - AluSg SINE Alu 0 308 1 6390 142 41 11 chr10 34390842 34391771 -105924994 - MER50-int LTR ERV1 -6079 1126 1 4383 133 21 29 chr10 34391854 34391925 -105924840 - MER50 LTR ERV1 -23 711 641 2363 112 0 0 chr10 34391925 34392230 -105924535 - AluSx SINE Alu -7 305 1 4383 133 21 29 chr10 34392230 34392875 -105923890 - MER50 LTR ERV1 -93 641 1 8131 161 35 1 chr10 34392884 34394191 -105922574 + L1M1 LINE L1 967 2318 -5247 1870 135 4 0 chr10 34394191 34394458 -105922307 + AluSx SINE Alu 1 268 -44 856 215 99 0 chr10 34394676 34394899 -105921866 + MIR SINE MIR 18 262 0 1689 181 10 24 chr10 34395029 34395321 -105921444 + AluJo SINE Alu 1 288 -24 2509 55 3 0 chr10 34395362 34395652 -105921113 + AluY SINE Alu 3 293 -18 695 142 67 8 chr10 34395889 34396009 -105920756 + FLAM_A SINE Alu 1 127 -6 603 286 16 5 chr10 34396020 34396212 -105920553 - MIR SINE MIR -10 252 59 1902 158 17 0 chr10 34396534 34396826 -105919939 - AluJb SINE Alu -15 297 1 378 0 0 0 chr10 34396946 34396988 -105919777 + (TG)n Simple_repeat Simple_repeat 2 43 0 352 180 0 155 chr10 34396990 34397057 -105919708 + MER20 DNA MER1_type 7 83 -136 1900 152 0 17 chr10 34397057 34397353 -105919412 - AluJb SINE Alu -21 291 1 352 180 0 155 chr10 34397353 34397453 -105919312 + MER20 DNA MER1_type 83 219 0 285 222 189 22 chr10 34397625 34397715 -105919050 - L2 LINE L2 -10 3303 3199 1870 137 7 31 chr10 34397762 34398054 -105918711 + AluSx SINE Alu 1 285 -27 414 0 0 0 chr10 34398060 34398106 -105918659 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 231 104 83 0 chr10 34398114 34398162 -105918603 - LTR66 LTR ERVL -172 438 387 180 0 0 0 chr10 34398981 34399001 -105917764 + (CA)n Simple_repeat Simple_repeat 1 20 0 418 107 0 0 chr10 34399207 34399263 -105917502 + AluJ/FLAM SINE Alu 2 57 -255 2698 125 46 16 chr10 34399418 34399850 -105916915 - MER83 LTR ERV1 0 448 4 1700 157 7 11 chr10 34399850 34400130 -105916635 - AluJo SINE Alu -33 279 1 1161 146 0 0 chr10 34400220 34400384 -105916381 - AluSg/x SINE Alu -14 296 133 994 180 0 0 chr10 34400781 34400942 -105915823 - FRAM SINE Alu -12 164 4 709 137 21 132 chr10 34401066 34401118 -105915647 + L1MA5A LINE L1 6126 6182 -115 2106 107 7 3 chr10 34401118 34401408 -105915357 + AluSq SINE Alu 1 291 -22 1633 151 75 0 chr10 34401412 34401525 -105915240 + AluJo SINE Alu 1 104 -208 378 42 0 0 chr10 34401525 34401573 -105915192 + (CA)n Simple_repeat Simple_repeat 1 48 0 1633 151 75 0 chr10 34401573 34401737 -105915028 + AluJo SINE Alu 104 299 -13 709 137 21 132 chr10 34401737 34401869 -105914896 + L1MA5A LINE L1 6185 6294 -3 2438 222 140 25 chr10 34402136 34403037 -105913728 + L1MEc LINE L1 36 1102 -5294 1706 179 0 3 chr10 34403037 34403327 -105913438 + AluJo SINE Alu 23 311 -1 2438 222 140 25 chr10 34403327 34403504 -105913261 + L1MEc LINE L1 1102 1257 -5139 2098 141 7 0 chr10 34403720 34404026 -105912739 + AluSx SINE Alu 1 308 -4 288 361 115 0 chr10 34404187 34404536 -105912229 - L2 LINE L2 -962 2352 1964 1760 174 4 4 chr10 34405371 34405652 -105911113 + AluJb SINE Alu 1 281 -31 5269 78 32 7 chr10 34405669 34406386 -105910379 - SVA Other Other -2 1384 650 424 136 0 0 chr10 34406393 34406459 -105910306 + Alu SINE Alu 235 300 -12 227 204 93 0 chr10 34406744 34406798 -105909967 - MLT1K LTR MaLR 0 588 530 1319 184 0 84 chr10 34406800 34407099 -105909666 + AluJb SINE Alu 1 274 -38 731 69 15 31 chr10 34407100 34407230 -105909535 + (TAGA)n Simple_repeat Simple_repeat 3 130 0 1223 221 75 96 chr10 34407268 34407343 -105909422 + MLT1F LTR MaLR 1 76 -466 3505 100 31 4 chr10 34407343 34407865 -105908900 - L1PA14 LINE L1 -2 6159 5624 1223 221 75 96 chr10 34407865 34408281 -105908484 + MLT1F LTR MaLR 76 482 -60 1910 144 0 7 chr10 34408291 34408575 -105908190 - AluJo SINE Alu -30 282 1 2528 68 0 0 chr10 34408767 34409063 -105907702 + AluY SINE Alu 2 297 -14 2671 43 0 0 chr10 34409618 34409919 -105906846 + AluY SINE Alu 1 301 -10 1755 153 14 14 chr10 34410964 34411280 -105905485 + AluJb SINE Alu 1 316 0 2318 100 0 0 chr10 34411576 34411867 -105904898 - AluY SINE Alu -20 291 1 725 146 9 0 chr10 34412063 34412173 -105904592 + FLAM_C SINE Alu 23 133 -10 551 238 0 8 chr10 34412405 34412527 -105904238 - L2 LINE L2 0 3313 3193 470 246 129 69 chr10 34412590 34412685 -105904080 + L1ME LINE L1 5420 5508 -613 1886 153 7 13 chr10 34412685 34412992 -105903773 - AluJb SINE Alu -5 307 3 470 246 129 69 chr10 34412992 34413128 -105903637 + L1ME LINE L1 5508 5665 -456 191 276 11 69 chr10 34413173 34413260 -105903505 + MIR SINE MIR 21 102 -160 559 279 24 18 chr10 34413272 34413437 -105903328 + MIR SINE MIR 81 246 -16 1542 163 37 41 chr10 34413644 34413938 -105902827 + AluJb SINE Alu 3 295 -17 6616 71 28 10 chr10 34413976 34415660 -105901105 + L1PA10 LINE L1 4429 6168 0 2390 103 0 0 chr10 34415666 34415976 -105900789 + AluSx SINE Alu 1 310 -2 341 282 32 8 chr10 34416401 34416525 -105900240 + LTR67 LTR ERVL 429 555 -2 2264 112 0 7 chr10 34416791 34417096 -105899669 - AluSx SINE Alu -9 303 1 1582 158 10 59 chr10 34417804 34418108 -105898657 + AluJo SINE Alu 1 289 -23 191 252 147 77 chr10 34418128 34418196 -105898569 - MER5A DNA MER1_type -6 183 121 2103 224 66 35 chr10 34418196 34418772 -105897993 - MLT1G1 LTR MaLR 0 595 2 191 252 147 77 chr10 34418772 34418846 -105897919 - MER5A DNA MER1_type -68 121 31 2034 154 19 0 chr10 34419086 34419398 -105897367 - 7SLRNA srpRNA srpRNA -2 318 1 209 282 68 98 chr10 34419757 34419920 -105896845 - L2 LINE L2 -1 3312 3155 354 230 14 14 chr10 34419923 34419997 -105896768 + Charlie1 DNA MER1_type 7 80 -2681 * 2156 189 74 4 chr10 34419979 34420508 -105896257 + Charlie1 DNA MER1_type 2132 2697 -64 1883 56 0 4 chr10 34420560 34420791 -105895974 + LTR9 LTR ERV1 1 230 -382 437 92 0 53 chr10 34420791 34420867 -105895898 + FLAM_C SINE Alu 69 140 -3 566 226 0 16 chr10 34421526 34421650 -105895115 + L2 LINE L2 3185 3306 -7 508 290 60 56 chr10 34421704 34422015 -105894750 - L2 LINE L2 -286 3027 2710 3808 160 28 35 chr10 34422015 34422708 -105894057 + L1MB3 LINE L1 5444 6133 -50 2428 89 0 0 chr10 34422708 34423011 -105893754 + AluSx SINE Alu 7 309 -3 3808 160 28 35 chr10 34423011 34423059 -105893706 + L1MB3 LINE L1 6133 6180 -3 508 290 60 56 chr10 34423059 34423124 -105893641 - L2 LINE L2 -603 2710 2647 2028 151 3 0 chr10 34423321 34423620 -105893145 + AluJb SINE Alu 1 300 -12 1154 188 131 33 chr10 34423681 34423919 -105892846 + Charlie1 DNA MER1_type 2350 2630 -131 2261 121 0 3 chr10 34423919 34424226 -105892539 - AluSg SINE Alu -4 306 1 1154 188 131 33 chr10 34424226 34424316 -105892449 + Charlie1 DNA MER1_type 2630 2710 -51 756 149 91 26 chr10 34424322 34424476 -105892289 - FRAM SINE Alu -21 155 1 487 206 19 0 chr10 34424526 34424633 -105892132 + MLT1L LTR MaLR 165 273 -342 426 259 38 71 chr10 34424762 34424913 -105891852 - L1ME LINE L1 -381 5740 5596 2399 92 0 0 chr10 34424913 34425208 -105891557 + AluSp SINE Alu 1 295 -18 426 259 38 71 chr10 34425208 34425268 -105891497 - L1ME LINE L1 -525 5596 5536 205 206 0 73 chr10 34425275 34425343 -105891422 - MIR SINE MIR -5 257 195 414 268 100 28 chr10 34425344 34425609 -105891156 - L1ME LINE L1 -770 5376 5236 523 269 133 27 chr10 34425623 34425917 -105890848 + MER46C DNA MER2_type 8 332 -6 432 256 6 44 chr10 34425949 34426109 -105890656 - L2 LINE L2 -956 2358 2205 338 76 0 136 chr10 34427456 34427490 -105889275 + L1MB2 LINE L1 6093 6115 -56 2144 103 21 0 chr10 34427490 34427780 -105888985 + AluSx SINE Alu 1 296 -16 338 76 0 136 chr10 34427780 34427811 -105888954 + L1MB2 LINE L1 6115 6149 -22 934 191 0 0 chr10 34427811 34427958 -105888807 - AluJb SINE Alu -29 283 137 467 117 13 52 chr10 34427959 34428036 -105888729 + MER2 DNA MER2_type 272 345 0 1100 236 220 24 chr10 34428078 34428628 -105888137 - HAL1 LINE L1 -36 2471 1814 310 213 120 13 chr10 34428644 34428719 -105888046 - HAL1 LINE L1 -766 1741 1659 1781 124 4 4 chr10 34428722 34428971 -105887794 + AluSx SINE Alu 1 249 -63 475 243 167 36 chr10 34429070 34429292 -105887473 - HAL1 LINE L1 -925 1582 1332 1473 230 203 17 chr10 34429301 34429888 -105886877 - HAL1 LINE L1 -1232 1275 580 1636 101 0 9 chr10 34429908 34430126 -105886639 + AluSx SINE Alu 1 216 -96 650 136 136 71 chr10 34430127 34430267 -105886498 + AluSc SINE Alu 150 298 -11 596 251 291 22 chr10 34430267 34430638 -105886127 - HAL1 LINE L1 -839 1668 1198 1345 149 5 0 chr10 34430681 34430896 -105885869 + AluSq SINE Alu 85 300 -13 250 264 153 18 chr10 34431461 34431624 -105885141 - LTR41 LTR ERVL -542 231 47 962 173 162 108 chr10 34431624 34431902 -105884863 - MLT1C LTR MaLR 0 467 98 669 286 89 31 chr10 34431910 34432330 -105884435 + HERV16 LTR ERVL 1787 1995 -3001 377 172 0 0 chr10 34432802 34432860 -105883905 + AluJ/FRAM SINE Alu 233 290 -12 1518 174 39 7 chr10 34432863 34433144 -105883621 + AluJb SINE Alu 1 290 -22 2262 90 10 3 chr10 34433158 34433459 -105883306 + AluSp SINE Alu 1 303 -10 1810 158 6 64 chr10 34433467 34433795 -105882970 + AluSx SINE Alu 1 309 -3 785 206 121 106 chr10 34434089 34434600 -105882165 + L1MC5 LINE L1 6961 7479 -482 614 195 65 95 chr10 34434669 34434779 -105881986 + L1MC5 LINE L1 7625 7737 -224 2422 57 3 35 chr10 34434779 34435093 -105881672 + AluY SINE Alu 7 310 -1 614 195 65 95 chr10 34435093 34435300 -105881465 + L1MC5 LINE L1 7737 7936 -25 2284 124 0 0 chr10 34435499 34435806 -105880959 + AluSx SINE Alu 1 307 -5 41 21 0 0 chr10 34436928 34436976 -105879789 + AT_rich Low_complexity Low_complexity 1 48 0 1840 98 0 12 chr10 34439184 34439440 -105877325 + AluSq SINE Alu 2 254 -59 2318 84 7 0 chr10 34439892 34440191 -105876574 - AluSp SINE Alu -12 301 1 441 312 133 21 chr10 34440447 34440777 -105875988 + L1MC4 LINE L1 7536 7902 -140 1135 113 12 0 chr10 34441223 34441383 -105875382 + AluSp SINE Alu 122 283 -30 204 40 0 0 chr10 34441537 34441562 -105875203 + (GA)n Simple_repeat Simple_repeat 2 26 0 419 191 86 0 chr10 34441693 34441798 -105874967 + L1ME LINE L1 5551 5664 -457 2285 98 10 7 chr10 34441832 34442139 -105874626 + AluSq SINE Alu 1 308 -5 1708 184 3 7 chr10 34442851 34443166 -105873599 + AluJb SINE Alu 1 314 0 2321 94 10 0 chr10 34443168 34443477 -105873288 + AluSp SINE Alu 1 312 -1 1860 102 24 54 chr10 34443510 34443827 -105872938 - AluSx SINE Alu 0 308 1 24 0 0 0 chr10 34445713 34445737 -105871028 + AT_rich Low_complexity Low_complexity 1 24 0 1201 180 27 9 chr10 34445759 34445981 -105870784 - AluJb SINE Alu -78 234 9 22 0 0 0 chr10 34446107 34446129 -105870636 + AT_rich Low_complexity Low_complexity 1 22 0 1521 163 39 25 chr10 34447437 34447719 -105869046 - AluJo SINE Alu -26 286 1 1899 145 0 3 chr10 34448689 34448986 -105867779 + AluY SINE Alu 4 299 -12 22 35 0 0 chr10 34450099 34450128 -105866637 + AT_rich Low_complexity Low_complexity 1 29 0 1674 225 77 31 chr10 34450523 34451136 -105865629 + L1MC3 LINE L1 4629 5274 -872 2820 10 0 0 chr10 34451136 34451441 -105865324 - AluYa5 SINE Alu -6 305 1 1674 225 77 31 chr10 34451441 34451466 -105865299 + L1MC3 LINE L1 5274 5296 -850 2213 109 0 3 chr10 34451469 34451771 -105864994 + AluSx SINE Alu 1 301 -11 2184 130 0 13 chr10 34451782 34452097 -105864668 + AluSx SINE Alu 1 311 -1 2550 178 77 48 chr10 34452100 34452372 -105864393 + L1MC3 LINE L1 5417 5680 -2105 1981 158 0 0 chr10 34452372 34452663 -105864102 - AluSx SINE Alu -21 291 1 2550 178 77 48 chr10 34452663 34453081 -105863684 + L1MC3 LINE L1 5680 6127 -1658 2371 90 0 13 chr10 34453140 34453452 -105863313 + AluY SINE Alu 1 308 -3 181 195 98 0 chr10 34453605 34453646 -105863119 + MIR SINE MIR 33 77 -131 225 156 94 0 chr10 34454454 34454518 -105862247 + L1MC5 LINE L1 7868 7937 -24 1580 167 73 31 chr10 34454606 34454894 -105861871 - AluJb SINE Alu -12 300 1 1326 147 44 0 chr10 34454967 34455171 -105861594 - AluJb SINE Alu -15 297 85 192 202 128 32 chr10 34455249 34455343 -105861422 + MIR SINE MIR 110 212 -50 765 169 52 0 chr10 34456220 34456356 -105860409 + MER46A DNA MER2_type 34 176 -60 2381 74 7 0 chr10 34457226 34457524 -105859241 + AluSq SINE Alu 2 301 -12 221 257 14 95 chr10 34457529 34457603 -105859162 - L2 LINE L2 -19 3294 3227 22 0 0 0 chr10 34457796 34457818 -105858947 + AT_rich Low_complexity Low_complexity 1 22 0 282 341 109 31 chr10 34458393 34458622 -105858143 - L2 LINE L2 0 3272 3026 2339 73 7 7 chr10 34458708 34459008 -105857757 + AluSq SINE Alu 1 300 -13 2355 87 0 0 chr10 34459072 34459371 -105857394 + AluSq SINE Alu 1 299 -14 372 236 101 0 chr10 34459472 34459606 -105857159 + MER20 DNA MER1_type 46 202 -17 1779 155 56 9 chr10 34460627 34460949 -105855816 + MER1B DNA MER1_type 1 337 0 488 173 119 38 chr10 34461451 34461467 -105855298 - L1M3f LINE L1 -4097 1527 1514 2155 120 0 3 chr10 34461467 34461767 -105854998 - AluSx SINE Alu -13 299 1 488 173 119 38 chr10 34461767 34461989 -105854776 - L1M3f LINE L1 -4110 1514 1018 195 42 0 0 chr10 34463138 34463162 -105853603 + (TC)n Simple_repeat Simple_repeat 1 24 0 22 35 0 0 chr10 34463740 34463769 -105852996 + AT_rich Low_complexity Low_complexity 1 29 0 1124 126 0 0 chr10 34463782 34463941 -105852824 - AluSg/x SINE Alu -19 291 133 1397 115 5 0 chr10 34464992 34465183 -105851582 + AluSg/x SINE Alu 86 277 -33 2414 67 0 0 chr10 34465196 34465479 -105851286 + AluSg SINE Alu 13 295 -15 365 258 44 88 chr10 34465762 34465921 -105850844 - MIR3 SINE MIR -34 174 23 198 220 286 0 chr10 34466237 34466328 -105850437 - L2 LINE L2 -22 3291 3175 360 0 0 0 chr10 34467981 34468021 -105848744 + (CA)n Simple_repeat Simple_repeat 2 41 0 2206 96 17 3 chr10 34468076 34468369 -105848396 + AluSg SINE Alu 1 297 -13 1021 138 0 0 chr10 34468382 34468527 -105848238 + AluSg/x SINE Alu 156 300 -12 1301 167 38 52 chr10 34469006 34469293 -105847472 - AluJo SINE Alu -29 283 1 218 231 58 0 chr10 34469933 34469985 -105846780 + L2 LINE L2 3210 3264 -8 943 208 47 63 chr10 34470261 34470357 -105846408 - MIR SINE MIR -7 255 159 2213 84 3 52 chr10 34470357 34470666 -105846099 - AluSx SINE Alu -18 294 1 943 208 47 63 chr10 34470666 34470824 -105845941 - MIR SINE MIR -103 159 5 2242 88 0 23 chr10 34471751 34472058 -105844707 + AluSp SINE Alu 2 301 -12 577 231 15 15 chr10 34472119 34472249 -105844516 - MIR SINE MIR -118 144 15 414 347 164 45 chr10 34473033 34473699 -105843066 + L3 LINE CR1 325 1069 -508 601 259 33 61 chr10 34473723 34473935 -105842830 + L2 LINE L2 556 761 -2553 853 127 14 42 chr10 34473936 34474078 -105842687 - FLAM_C SINE Alu -5 138 1 1179 259 267 16 chr10 34474092 34474175 -105842590 + L2 LINE L2 772 833 -2481 2132 146 14 27 chr10 34474175 34474545 -105842220 - MER47A DNA MER2_type -1 365 1 1179 259 267 16 chr10 34474545 34475105 -105841660 + L2 LINE L2 833 1577 -1737 308 343 35 21 chr10 34475103 34475246 -105841519 + L3 LINE CR1 1327 1471 -106 * 234 258 106 0 chr10 34476078 34476144 -105840621 + L2 LINE L2 3187 3259 -54 1473 144 156 4 chr10 34476233 34476489 -105840276 - AluJb SINE Alu -7 295 1 182 310 224 0 chr10 34476507 34476623 -105840142 - L2 LINE L2 0 3313 3172 323 237 175 0 chr10 34476945 34477059 -105839706 - Charlie1a DNA MER1_type -1320 135 2 290 235 126 34 chr10 34477064 34477183 -105839582 - L2 LINE L2 -1235 2079 1950 316 219 288 19 chr10 34477822 34478027 -105838738 + MLT1L LTR MaLR 354 613 -2 1378 117 0 0 chr10 34478538 34478718 -105838047 - AluSx SINE Alu -132 180 1 2288 83 3 29 chr10 34480801 34481115 -105835650 + AluSq SINE Alu 1 306 -7 198 71 0 0 chr10 34482879 34482907 -105833858 + (CA)n Simple_repeat Simple_repeat 1 28 0 189 0 0 0 chr10 34483559 34483580 -105833185 + (CGG)n Simple_repeat Simple_repeat 2 22 0 472 141 87 0 chr10 34484104 34484196 -105832569 + HY3 scRNA scRNA 1 100 -1 188 290 43 65 chr10 34484796 34484867 -105831898 + MIR3 SINE MIR 103 173 -35 2734 198 54 14 chr10 34484867 34485359 -105831406 - LTR65 LTR ERV1 0 669 143 1887 141 36 20 chr10 34485359 34485664 -105831101 + AluJo SINE Alu 1 310 -2 2734 198 54 14 chr10 34485664 34485814 -105830951 - LTR65 LTR ERV1 -526 143 1 188 290 43 65 chr10 34485814 34485835 -105830930 + MIR3 SINE MIR 173 193 -15 2701 188 28 17 chr10 34486113 34486650 -105830115 - MER67A LTR ERV1 0 543 1 711 308 84 15 chr10 34486668 34486941 -105829824 - MER102b DNA MER1_type -49 292 1 1936 165 0 3 chr10 34487597 34487906 -105828859 + AluSx SINE Alu 1 308 -4 2431 93 0 0 chr10 34488325 34488627 -105828138 + AluSq SINE Alu 1 302 -11 2181 220 43 17 chr10 34488688 34489156 -105827609 + MLT1H1 LTR MaLR 66 545 -10 21 0 0 0 chr10 34489251 34489272 -105827493 + AT_rich Low_complexity Low_complexity 1 21 0 257 309 21 11 chr10 34489570 34489664 -105827101 - L2 LINE L2 -7 3306 3212 216 0 0 0 chr10 34490084 34490108 -105826657 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2238 110 3 0 chr10 34490112 34490404 -105826361 - AluSx SINE Alu -19 293 1 764 188 0 16 chr10 34490407 34490535 -105826230 - FLAM_A SINE Alu -7 126 1 1282 216 120 22 chr10 34490571 34491079 -105825686 - HAL1 LINE L1 -6 2501 1944 280 137 324 10 chr10 34491071 34491173 -105825592 - HAL1 LINE L1 -950 1557 1424 * 286 182 11 23 chr10 34491181 34491269 -105825496 - HAL1 LINE L1 -1320 1187 1101 315 0 0 0 chr10 34491273 34491308 -105825457 + (TG)n Simple_repeat Simple_repeat 2 36 0 1785 183 0 10 chr10 34491335 34491635 -105825130 + AluJb SINE Alu 1 297 -15 360 0 0 0 chr10 34491668 34491708 -105825057 + (TG)n Simple_repeat Simple_repeat 2 41 0 2168 112 3 0 chr10 34491808 34492095 -105824670 - AluSp SINE Alu -24 289 2 379 323 39 35 chr10 34492095 34492327 -105824438 - HAL1 LINE L1 -1569 938 706 2209 132 0 3 chr10 34492327 34492638 -105824127 - AluSx SINE Alu -2 310 1 3706 135 20 26 chr10 34492639 34493282 -105823483 - L1 LINE L1 -954 5192 4554 1060 330 66 17 chr10 34493301 34493870 -105822895 - HAL1 LINE L1 -1817 690 84 1840 152 3 37 chr10 34493870 34494192 -105822573 - AluSx SINE Alu -1 311 1 1060 330 66 17 chr10 34494192 34494271 -105822494 - HAL1 LINE L1 -2423 84 10 182 292 133 26 chr10 34494299 34494412 -105822353 + L2 LINE L2 3170 3294 -19 1938 174 0 0 chr10 34494743 34495048 -105821717 - AluJo SINE Alu -6 306 2 1065 117 0 0 chr10 34495275 34495420 -105821345 - AluSx SINE Alu 0 310 166 541 138 0 0 chr10 34495420 34495500 -105821265 - AluSx SINE Alu -232 81 2 1817 109 68 4 chr10 34495645 34495955 -105820810 - AluSg SINE Alu 0 327 1 357 219 134 17 chr10 34496077 34496196 -105820569 - LTR16A LTR ERVL -110 340 208 2281 99 16 0 chr10 34496407 34496710 -105820055 - AluSq SINE Alu -5 308 1 2479 76 3 0 chr10 34496936 34497239 -105819526 - AluSp SINE Alu -9 304 1 1776 168 7 20 chr10 34497240 34497408 -105819357 - AluJo SINE Alu -19 293 129 2396 87 3 0 chr10 34497408 34497706 -105819059 - AluSx SINE Alu -13 299 1 1776 168 7 20 chr10 34497706 34497834 -105818931 - AluJo SINE Alu -183 129 1 202 149 54 14 chr10 34500885 34500959 -105815806 + (TA)n Simple_repeat Simple_repeat 1 77 0 303 287 108 31 chr10 34501355 34501484 -105815281 - L2 LINE L2 -1 3312 3174 2229 94 0 17 chr10 34502565 34502864 -105813901 + AluSg SINE Alu 1 294 -16 234 200 0 0 chr10 34502868 34502913 -105813852 + MIR SINE MIR 218 262 0 661 186 39 16 chr10 34503021 34503150 -105813615 + FLAM_C SINE Alu 2 133 -10 1582 122 26 86 chr10 34503435 34503762 -105813003 - AluJo SINE Alu 0 309 1 2320 214 78 24 chr10 34503791 34504255 -105812510 + MER21B LTR ERV1 151 650 -213 1748 94 124 15 chr10 34504255 34504520 -105812245 + AluSg1 SINE Alu 5 298 -11 2320 214 78 24 chr10 34504520 34504596 -105812169 + MER21B LTR ERV1 650 720 -143 2201 117 0 0 chr10 34504603 34504893 -105811872 + AluSx SINE Alu 11 300 -12 428 165 0 0 chr10 34504911 34504990 -105811775 - Alu SINE Alu 0 312 234 856 118 0 8 chr10 34504992 34505111 -105811654 + FLAM_C SINE Alu 14 131 -12 2340 120 0 0 chr10 34505748 34506057 -105810708 + AluSc SINE Alu 1 309 0 1919 168 0 7 chr10 34506261 34506570 -105810195 + AluJo SINE Alu 1 307 -5 4638 183 57 37 chr10 34507042 34507094 -105809671 - Tigger6a DNA MER2_type -514 1083 1034 1982 125 14 0 chr10 34507094 34507398 -105809367 + AluSx SINE Alu 1 308 0 4638 183 57 37 chr10 34507398 34507698 -105809067 - Tigger6a DNA MER2_type -563 1034 741 2170 114 31 0 chr10 34507698 34507987 -105808778 - AluSx SINE Alu -14 298 1 4638 183 57 37 chr10 34507987 34508217 -105808548 - Tigger6a DNA MER2_type -856 741 517 2010 154 0 3 chr10 34508217 34508516 -105808249 - AluSx SINE Alu -13 299 2 4638 183 57 37 chr10 34508516 34508992 -105807773 - Tigger6a DNA MER2_type -1080 517 1 2072 121 3 3 chr10 34509656 34509953 -105806812 + AluSq SINE Alu 1 297 -16 288 149 21 0 chr10 34510091 34510138 -105806627 - MER66B LTR ERV1 -141 345 298 1481 156 0 9 chr10 34510873 34511104 -105805661 + AluJb SINE Alu 1 229 -83 2088 129 7 7 chr10 34511104 34511413 -105805352 - AluSx SINE Alu -3 309 1 496 163 0 0 chr10 34511413 34511499 -105805266 + AluJb SINE Alu 221 306 -6 911 294 96 14 chr10 34511620 34512049 -105804716 + LTR16B LTR ERVL 1 464 0 2435 103 0 0 chr10 34512236 34512538 -105804227 + AluSq SINE Alu 1 302 -11 1654 172 14 4 chr10 34512666 34512945 -105803820 - AluJo SINE Alu -26 286 5 296 318 18 18 chr10 34513002 34513112 -105803653 + MER5A DNA MER1_type 80 189 0 2148 122 7 10 chr10 34513357 34513661 -105803104 + AluSx SINE Alu 1 303 -9 586 147 0 8 chr10 34513901 34514113 -105802652 + AluJo SINE Alu 3 274 -38 13144 194 24 26 chr10 34514497 34515047 -105801718 - L1PA16 LINE L1 -3 6163 5614 2403 90 0 0 chr10 34515047 34515348 -105801417 - AluY SINE Alu -10 301 1 13144 194 24 26 chr10 34515348 34515486 -105801279 - L1PA16 LINE L1 -552 5614 5477 2366 98 0 0 chr10 34515486 34515783 -105800982 + AluSq SINE Alu 1 297 -16 13144 194 24 26 chr10 34515783 34519084 -105797681 - L1PA16 LINE L1 -689 5477 2187 2516 66 0 3 chr10 34519084 34519385 -105797380 - AluSp SINE Alu -13 300 1 13144 194 24 26 chr10 34519385 34519443 -105797322 - L1PA16 LINE L1 -3979 2187 2130 2248 110 0 0 chr10 34519485 34519775 -105796990 - AluSg SINE Alu -20 290 1 2280 83 3 29 chr10 34519777 34520090 -105796675 - AluY SINE Alu -6 305 1 2311 110 0 3 chr10 34520235 34520545 -105796220 - AluSg SINE Alu -1 309 1 213 182 136 30 chr10 34521189 34521255 -105795510 - L2 LINE L2 -2 3311 3239 402 329 167 13 chr10 34521353 34521873 -105794892 - L2 LINE L2 -211 3061 2454 773 144 29 69 chr10 34521906 34522025 -105794740 - MER96B DNA MER1_type? -10 407 296 2066 115 56 0 chr10 34522025 34522313 -105794452 + AluSg SINE Alu 1 304 -6 773 144 29 69 chr10 34522313 34522366 -105794399 - MER96B DNA MER1_type? -121 296 242 327 261 52 30 chr10 34522390 34522524 -105794241 - MIR SINE MIR -66 196 60 925 229 0 0 chr10 34522788 34522954 -105793811 + FRAM SINE Alu 1 166 0 1995 142 78 26 chr10 34523213 34523559 -105793206 + THE1B LTR MaLR 1 364 0 1747 144 0 0 chr10 34523692 34523935 -105792830 - AluSx SINE Alu -15 297 55 2141 124 40 32 chr10 34524815 34525187 -105791578 - THE1C LTR MaLR 0 375 1 11159 100 8 34 chr10 34525187 34526809 -105789956 - THE1C-int LTR MaLR 0 1580 1 2251 116 19 26 chr10 34526809 34527187 -105789578 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr10 34527568 34527589 -105789176 + AT_rich Low_complexity Low_complexity 1 21 0 760 200 0 67 chr10 34527882 34527919 -105788846 + FRAM SINE Alu 1 39 -273 2726 78 19 0 chr10 34527919 34528280 -105788485 - L1PA8 LINE L1 0 6172 5805 760 200 0 67 chr10 34528280 34528422 -105788343 + FRAM SINE Alu 39 168 -8 390 308 38 11 chr10 34529060 34529245 -105787520 - L1MC4 LINE L1 -1073 6969 6780 2177 148 35 83 chr10 34530672 34530841 -105785924 - MSTB2 LTR MaLR 0 457 281 2104 135 3 10 chr10 34530841 34531152 -105785613 + AluSx SINE Alu 1 309 -3 2177 148 35 83 chr10 34531152 34531462 -105785303 - MSTB2 LTR MaLR -176 281 1 205 200 0 0 chr10 34532570 34532610 -105784155 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 2066 123 24 0 chr10 34532973 34533265 -105783500 + AluSq SINE Alu 1 299 -14 337 291 61 20 chr10 34533386 34533534 -105783231 - MIR SINE MIR -50 212 59 1487 141 77 0 chr10 34533614 34533862 -105782903 + AluJb SINE Alu 1 267 -45 656 264 40 17 chr10 34533879 34534053 -105782712 + MER45A DNA AcHobo 1 178 0 337 80 0 20 chr10 34534286 34534336 -105782429 - MADE1 DNA Mariner -31 49 1 1751 174 10 13 chr10 34534453 34534751 -105782014 - AluJo SINE Alu -15 297 1 266 274 91 69 chr10 34534978 34535153 -105781612 + MER68 LTR ERV1 353 531 -31 2313 81 0 0 chr10 34535329 34535613 -105781152 + AluY SINE Alu 5 288 -23 560 288 72 46 chr10 34535872 34536207 -105780558 + L1MC4a LINE L1 5489 5740 -422 2241 106 0 10 chr10 34536207 34536509 -105780256 + AluSx SINE Alu 1 299 -13 560 288 72 46 chr10 34536509 34536531 -105780234 + L1MC4a LINE L1 5740 5760 -402 350 257 28 0 chr10 34538394 34538503 -105778262 - L1MA5 LINE L1 -443 5857 5746 * 364 283 9 0 chr10 34538501 34538614 -105778151 - L1MA5 LINE L1 -441 5859 5746 538 154 77 26 chr10 34538616 34538733 -105778032 - L1MA5A LINE L1 -440 5857 5735 1934 129 3 3 chr10 34539905 34540200 -105776565 + AluJb SINE Alu 1 295 -17 33 90 0 0 chr10 34540233 34540322 -105776443 + AT_rich Low_complexity Low_complexity 1 89 0 867 157 59 7 chr10 34540741 34540894 -105775871 - FAM SINE Alu -14 171 11 801 175 165 48 chr10 34540970 34541279 -105775486 + L1MC5 LINE L1 7582 7926 -35 2192 100 0 23 chr10 34541508 34541817 -105774948 - AluSg SINE Alu -8 302 1 180 111 0 0 chr10 34542152 34542179 -105774586 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 25 51 0 0 chr10 34542249 34542288 -105774477 + AT_rich Low_complexity Low_complexity 1 39 0 1193 57 0 6 chr10 34542602 34542761 -105774004 + (TTC)n Simple_repeat Simple_repeat 2 159 0 1445 28 0 6 chr10 34542810 34542989 -105773776 + (TTC)n Simple_repeat Simple_repeat 3 180 0 627 159 0 0 chr10 34542990 34543103 -105773662 + CT-rich Low_complexity Low_complexity 3 115 0 710 231 25 6 chr10 34543108 34543268 -105773497 - FRAM SINE Alu -8 168 6 1891 141 31 0 chr10 34543807 34544098 -105772667 + AluJb SINE Alu 1 300 -12 2044 130 3 13 chr10 34544506 34544822 -105771943 + AluSp SINE Alu 1 313 0 1559 154 41 4 chr10 34545171 34545437 -105771328 - AluJo SINE Alu -36 276 1 21 36 0 0 chr10 34545461 34545489 -105771276 + AT_rich Low_complexity Low_complexity 1 28 0 1989 121 10 0 chr10 34545819 34546108 -105770657 + AluSx SINE Alu 1 292 -20 3374 73 0 0 chr10 34546653 34547076 -105769689 + L1PA8 LINE L1 5746 6168 -4 820 153 0 8 chr10 34547801 34547932 -105768833 - AluJo SINE Alu -176 136 7 1122 140 68 110 chr10 34548014 34548278 -105768487 + LTR26B LTR ERV1 1 253 -278 979 196 12 0 chr10 34548275 34548438 -105768327 + LTR26B LTR ERV1 367 531 0 * 188 303 0 45 chr10 34548633 34548699 -105768066 - L2 LINE L2 -5 3308 3246 5223 188 45 17 chr10 34548980 34550556 -105766209 - MER52A LTR ERV1 0 1755 1 242 234 0 52 chr10 34550770 34550818 -105765947 + MLT1K LTR MaLR 513 557 -31 2393 126 27 30 chr10 34550818 34551198 -105765567 + MER57A LTR ERV1 1 381 -22 1887 161 0 0 chr10 34551198 34551508 -105765257 - AluSx SINE Alu -2 310 1 2393 126 27 30 chr10 34551508 34551531 -105765234 + MER57A LTR ERV1 381 403 0 242 234 0 52 chr10 34551531 34551559 -105765206 + MLT1K LTR MaLR 557 585 -3 2163 108 3 6 chr10 34551561 34551875 -105764890 + AluSp SINE Alu 1 313 0 1978 121 0 26 chr10 34552176 34552483 -105764282 - AluSg SINE Alu -11 299 1 1536 155 86 17 chr10 34553071 34553361 -105763404 + AluJo SINE Alu 3 312 0 716 124 0 0 chr10 34553387 34553500 -105763265 + L1MA5A LINE L1 6185 6297 0 2208 108 0 0 chr10 34553597 34553902 -105762863 + AluSg SINE Alu 1 305 -5 3313 145 97 26 chr10 34554169 34554447 -105762318 - LTR51 LTR ERV1 0 671 414 2003 122 0 10 chr10 34554447 34554771 -105761994 + AluSg SINE Alu 1 310 0 3313 145 97 26 chr10 34554771 34555118 -105761647 - LTR51 LTR ERV1 -257 414 1 2149 86 4 0 chr10 34555206 34555517 -105761248 + AluSg SINE Alu 1 312 0 1868 154 10 0 chr10 34556415 34556721 -105760044 - AluJo SINE Alu -1 311 3 1466 110 169 12 chr10 34557279 34557533 -105759232 + AluSg1 SINE Alu 1 294 -15 2437 63 0 0 chr10 34557664 34557963 -105758802 - AluY SINE Alu -12 299 1 480 212 229 0 chr10 34558479 34558649 -105758116 - MER3 DNA MER1_type 0 209 1 353 250 221 15 chr10 34558671 34558807 -105757958 + MER5A DNA MER1_type 26 189 0 2792 114 17 60 chr10 34558823 34559444 -105757321 + MER4E LTR ERV1 1 766 0 489 143 24 0 chr10 34559571 34559655 -105757110 + LTR56 LTR ERV1 1 86 -359 2337 101 116 11 chr10 34559655 34560051 -105756714 - MER61C LTR ERV1 0 434 13 863 114 8 0 chr10 34560050 34560173 -105756592 + LTR56 LTR ERV1 81 204 -241 * 2246 101 0 0 chr10 34660216 34660503 -105656262 - AluSx SINE Alu -15 297 11 24 0 0 0 chr10 34661312 34661336 -105655429 + AT_rich Low_complexity Low_complexity 1 24 0 296 303 114 8 chr10 34661504 34661636 -105655129 - MIR SINE MIR 0 262 117 432 233 48 20 chr10 34662062 34662208 -105654557 + MER103 DNA DNA 2 151 -15 1848 146 46 4 chr10 34662477 34662758 -105654007 - AluJb SINE Alu -15 297 5 313 309 74 28 chr10 34662809 34662971 -105653794 + L1ME4a LINE L1 5707 5883 -238 2270 113 3 0 chr10 34662971 34663272 -105653493 + AluSx SINE Alu 3 304 -8 313 309 74 28 chr10 34663272 34663326 -105653439 + L1ME4a LINE L1 5883 5933 -188 203 247 0 24 chr10 34663336 34663364 -105653401 + A-rich Low_complexity Low_complexity 2 29 -55 1712 179 7 3 chr10 34663364 34663649 -105653116 + AluJo SINE Alu 1 286 -26 203 247 0 24 chr10 34663649 34663705 -105653060 + A-rich Low_complexity Low_complexity 29 84 0 1479 78 16 0 chr10 34664122 34664314 -105652451 - AluY SINE Alu -9 302 108 1339 119 115 9 chr10 34664450 34664676 -105652089 + AluSx SINE Alu 56 305 -7 234 0 0 0 chr10 34664797 34664823 -105651942 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1978 102 0 24 chr10 34664834 34665158 -105651607 + AluY SINE Alu 1 317 0 509 308 111 31 chr10 34666347 34666672 -105650093 + MLT1I LTR MaLR 59 409 0 2387 190 90 25 chr10 34666900 34667186 -105649579 + L1MA6 LINE L1 5372 5638 -660 264 30 0 0 chr10 34667186 34667219 -105649546 + (CA)n Simple_repeat Simple_repeat 2 34 0 2387 190 90 25 chr10 34667219 34667690 -105649075 + L1MA6 LINE L1 5638 6267 -31 1574 190 57 9 chr10 34667690 34668021 -105648744 - MER7A DNA MER2_type -1 345 1 2387 190 90 25 chr10 34668021 34668053 -105648712 + L1MA6 LINE L1 6267 6295 -3 963 273 45 36 chr10 34669198 34669557 -105647208 + MLT1I LTR MaLR 40 401 -8 486 340 79 23 chr10 34670025 34670430 -105646335 - L2 LINE L2 -237 3035 2545 1310 117 0 0 chr10 34671324 34671503 -105645262 + AluSq SINE Alu 132 310 -3 182 364 85 0 chr10 34672356 34672485 -105644280 - L2 LINE L2 -278 2994 2855 695 213 173 6 chr10 34672487 34672925 -105643840 + MLT1F1 LTR MaLR 1 567 0 391 279 66 90 chr10 34673075 34673183 -105643582 + MLT1F1-int LTR MaLR 308 417 -954 2195 77 30 7 chr10 34673183 34673480 -105643285 + AluSc SINE Alu 1 304 -5 391 279 66 90 chr10 34673480 34673672 -105643093 + MLT1F1-int LTR MaLR 417 601 -770 262 346 34 22 chr10 34673907 34674086 -105642679 + MLT1F1-int LTR MaLR 699 879 -492 954 266 117 19 chr10 34674606 34675035 -105641730 - MER20B DNA MER1_type -312 471 1 1905 306 152 25 chr10 34675298 34676186 -105640579 + L2 LINE L2 75 1173 -2141 2335 95 7 3 chr10 34676186 34676491 -105640274 - AluSq SINE Alu -7 306 1 1905 306 152 25 chr10 34676491 34676868 -105639897 + L2 LINE L2 1173 1501 -1813 250 203 31 16 chr10 34676924 34676988 -105639777 - L2 LINE L2 -1686 1628 1564 1753 254 85 25 chr10 34677066 34677758 -105639007 - L1MEc LINE L1 -5483 913 180 1081 268 282 32 chr10 34677820 34678887 -105637878 + L2 LINE L2 1729 3070 -243 814 167 7 0 chr10 34678924 34679097 -105637668 + AluJb SINE Alu 145 318 0 30 27 0 0 chr10 34679917 34679954 -105636811 + AT_rich Low_complexity Low_complexity 1 37 0 331 299 249 28 chr10 34680299 34680476 -105636289 - MIR SINE MIR -20 242 27 267 158 53 0 chr10 34681033 34681090 -105635675 - MER116 DNA Mariner -3 77 18 1579 146 117 10 chr10 34681232 34681541 -105635224 - MER46B DNA MER2_type 0 236 20 1050 152 71 10 chr10 34682651 34682848 -105633917 - MER3 DNA MER1_type 0 209 1 2085 96 0 42 chr10 34682904 34683217 -105633548 - AluSg SINE Alu -10 300 1 2363 82 3 0 chr10 34683610 34683903 -105632862 + AluSg SINE Alu 1 294 -16 2216 108 0 16 chr10 34684262 34684569 -105632196 - AluSq SINE Alu -11 302 1 2414 50 0 0 chr10 34684775 34685079 -105631686 - AluY SINE Alu 0 304 1 263 237 53 0 chr10 34685985 34686061 -105630704 - L1MC4 LINE L1 -40 8002 7923 2295 114 0 0 chr10 34686162 34686468 -105630297 - AluSx SINE Alu -6 306 1 240 111 0 0 chr10 34686523 34686559 -105630206 + (CAT)n Simple_repeat Simple_repeat 1 36 0 1076 249 189 38 chr10 34686559 34686898 -105629867 - L1MC4 LINE L1 -507 7535 7249 2236 95 7 3 chr10 34686898 34687194 -105629571 - AluY SINE Alu -14 297 1 1076 249 189 38 chr10 34687194 34687231 -105629534 - L1MC4 LINE L1 -793 7249 7219 1216 52 0 0 chr10 34687231 34687384 -105629381 - L1PA5 LINE L1 -4 6150 5998 1076 249 189 38 chr10 34687384 34687417 -105629348 - L1MC4 LINE L1 -823 7219 7192 2362 100 0 0 chr10 34687417 34687716 -105629049 - AluSx SINE Alu -13 299 1 1076 249 189 38 chr10 34687716 34688021 -105628744 - L1MC4 LINE L1 -850 7192 6934 504 86 0 0 chr10 34688021 34688091 -105628674 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 1076 249 189 38 chr10 34688091 34688133 -105628632 - L1MC4 LINE L1 -1108 6934 6661 2166 265 49 9 chr10 34688190 34688949 -105627816 + L1MD2 LINE L1 4416 5204 -942 1506 76 0 0 chr10 34688974 34689159 -105627606 + AluY SINE Alu 1 185 -126 596 78 0 0 chr10 34689159 34689236 -105627529 + AluY SINE Alu 218 294 -17 4102 194 49 50 chr10 34689240 34689348 -105627417 + L1MD2 LINE L1 5227 5334 -1025 2147 120 0 7 chr10 34689348 34689647 -105627118 + AluSx SINE Alu 1 297 -15 4102 194 49 50 chr10 34689647 34690004 -105626761 + L1MD2 LINE L1 5334 5690 -669 2093 138 7 0 chr10 34690004 34690308 -105626457 + AluSx SINE Alu 1 306 -6 4102 194 49 50 chr10 34690308 34690922 -105625843 + L1MD2 LINE L1 5690 6309 -50 2515 74 6 0 chr10 34691620 34691931 -105624834 + AluSp SINE Alu 1 313 0 1147 230 28 0 chr10 34692351 34692564 -105624201 + MER58A DNA MER1_type 3 221 -3 463 298 92 25 chr10 34693642 34693880 -105622885 + MIR SINE MIR 3 256 -6 264 30 0 0 chr10 34693997 34694030 -105622735 + (CA)n Simple_repeat Simple_repeat 2 34 0 371 237 45 87 chr10 34694098 34694350 -105622415 - L1MC4a LINE L1 -132 5989 5749 1831 123 38 34 chr10 34695244 34695536 -105621229 + AluSx SINE Alu 1 293 -19 4786 129 31 18 chr10 34695798 34696573 -105620192 + L1MA3 LINE L1 5521 6305 0 21 36 0 0 chr10 34696573 34696601 -105620164 + AT_rich Low_complexity Low_complexity 1 28 0 1027 85 0 0 chr10 34696713 34696843 -105619922 + FLAM_C SINE Alu 1 130 -3 400 253 26 113 chr10 34697019 34697052 -105619713 + MIR SINE MIR 2 36 -226 2173 139 0 0 chr10 34697052 34697355 -105619410 + AluSx SINE Alu 1 303 -9 400 253 26 113 chr10 34697355 34697515 -105619250 + MIR SINE MIR 36 178 -84 1843 115 4 4 chr10 34697774 34698027 -105618738 + AluSx SINE Alu 44 296 -16 468 290 52 5 chr10 34698085 34698168 -105618597 + L1MC4 LINE L1 7841 7919 -123 2592 49 0 10 chr10 34698168 34698476 -105618289 + AluY SINE Alu 1 305 -6 468 290 52 5 chr10 34698476 34698585 -105618180 + L1MC4 LINE L1 7919 8042 0 1711 145 148 6 chr10 34698749 34699067 -105617698 - Tigger7 DNA MER2_type 0 2487 2125 589 202 37 9 chr10 34699101 34699210 -105617555 - Tigger7 DNA MER2_type -621 112 1 377 282 87 29 chr10 34699230 34699436 -105617329 - L2 LINE L2 -409 2905 2688 533 227 34 84 chr10 34699615 34699853 -105616912 + L2 LINE L2 3084 3309 -4 267 314 204 40 chr10 34700449 34700748 -105616017 - L2 LINE L2 -19 3294 2947 2319 94 16 0 chr10 34700748 34701055 -105615710 + AluSx SINE Alu 1 312 0 21 36 0 0 chr10 34701122 34701150 -105615615 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr10 34701270 34701306 -105615459 + AT_rich Low_complexity Low_complexity 1 36 0 182 353 87 83 chr10 34701957 34702223 -105614542 + L2 LINE L2 2926 3192 -80 25 51 0 0 chr10 34702523 34702562 -105614203 + AT_rich Low_complexity Low_complexity 1 39 0 985 271 57 49 chr10 34702891 34703286 -105613479 + L2 LINE L2 2584 3057 -256 2029 232 67 14 chr10 34703289 34703949 -105612816 + L1ME2 LINE L1 5442 6154 -10 231 210 95 70 chr10 34703988 34704188 -105612577 + L1MC4 LINE L1 7826 8030 -12 365 298 149 0 chr10 34704230 34704411 -105612354 + L2 LINE L2 3106 3313 0 2128 114 0 0 chr10 34704520 34704800 -105611965 + AluSx SINE Alu 22 301 -11 579 308 157 26 chr10 34705536 34705994 -105610771 + L2 LINE L2 2125 2642 -672 988 234 62 14 chr10 34706511 34706802 -105609963 + L1MC4 LINE L1 7284 7588 -454 2164 98 3 14 chr10 34706822 34707118 -105609647 - AluSx SINE Alu -19 293 1 664 148 102 77 chr10 34707129 34707325 -105609440 + L1MC4 LINE L1 7839 8039 -3 290 277 18 66 chr10 34707573 34707739 -105609026 + MER103 DNA DNA 1 158 -8 1983 125 35 0 chr10 34707739 34708026 -105608739 - AluSx SINE Alu -15 297 1 1055 229 28 5 chr10 34708263 34708477 -105608288 + MER58A DNA MER1_type 2 220 -4 912 203 31 0 chr10 34708492 34708655 -105608110 - FAM SINE Alu -7 168 1 206 259 56 19 chr10 34708867 34708921 -105607844 - MIR SINE MIR -187 75 20 2022 146 20 65 chr10 34709874 34710271 -105606494 + L1MA4 LINE L1 5913 6291 -9 1768 146 7 44 chr10 34710672 34710967 -105605798 + AluSx SINE Alu 1 284 -28 1475 182 34 34 chr10 34711970 34712261 -105604504 + AluJb SINE Alu 1 291 -21 195 69 0 0 chr10 34712736 34712765 -105604000 + (TG)n Simple_repeat Simple_repeat 2 30 0 2300 72 3 3 chr10 34714642 34714933 -105601832 - AluSq SINE Alu -22 291 1 2237 106 0 3 chr10 34715926 34716229 -105600536 + AluSx SINE Alu 1 302 -10 23 33 0 0 chr10 34717994 34718024 -105598741 + GC_rich Low_complexity Low_complexity 1 30 0 200 287 32 167 chr10 34720165 34720447 -105596318 - L2 LINE L2 -101 3171 2928 183 42 0 0 chr10 34720997 34721021 -105595744 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1689 162 20 14 chr10 34721023 34721320 -105595445 - AluJo SINE Alu -11 301 3 2342 97 0 3 chr10 34722797 34723097 -105593668 + AluSq SINE Alu 1 299 -14 189 0 0 0 chr10 34723318 34723339 -105593426 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2173 98 0 17 chr10 34723347 34723634 -105593131 - AluSx SINE Alu -30 282 1 2531 56 0 10 chr10 34723641 34723945 -105592820 - AluY SINE Alu -10 301 1 382 305 0 0 chr10 34724006 34724111 -105592654 + MIR SINE MIR 158 262 0 185 277 0 0 chr10 34724112 34724159 -105592606 + L2 LINE L2 3001 3047 -225 187 176 0 0 chr10 34724163 34724197 -105592568 + MIR SINE MIR 103 136 -72 307 323 213 0 chr10 34724286 34724450 -105592315 - MIR SINE MIR 0 262 64 2223 125 3 0 chr10 34724472 34724784 -105591981 + AluSp SINE Alu 1 313 0 321 349 32 24 chr10 34725144 34725270 -105591495 - L2 LINE L2 -1 3271 3145 1388 96 0 0 chr10 34725892 34726069 -105590696 + AluY SINE Alu 122 298 -13 2911 135 43 22 chr10 34726303 34726763 -105590002 + MER1A DNA MER1_type 60 529 0 2118 99 50 17 chr10 34727206 34727508 -105589257 - AluSx SINE Alu 0 312 1 1066 48 0 0 chr10 34728301 34728425 -105588340 + AluY SINE Alu 2 125 -186 2438 110 48 28 chr10 34728797 34729153 -105587612 + THE1B LTR MaLR 1 363 -1 2068 127 3 3 chr10 34729214 34729506 -105587259 + AluSp SINE Alu 4 295 -18 1362 154 162 18 chr10 34729623 34729895 -105586870 - AluSx SINE Alu -1 311 1 1653 159 16 41 chr10 34730378 34730480 -105586285 + L1MB3 LINE L1 5582 5685 -498 2144 139 0 0 chr10 34730480 34730789 -105585976 - AluSg SINE Alu -1 309 1 1653 159 16 41 chr10 34730789 34731001 -105585764 + L1MB3 LINE L1 5685 5888 -295 685 90 0 11 chr10 34731081 34731170 -105585595 + AluSp SINE Alu 64 151 -162 509 164 100 1 chr10 34731176 34731279 -105585486 - MLT1B LTR MaLR -269 112 1 231 111 0 0 chr10 34731279 34731315 -105585450 - L1M3 LINE L1 -243 5928 5893 2242 125 0 3 chr10 34731354 34731665 -105585100 + AluSx SINE Alu 1 310 -2 742 244 78 5 chr10 34731688 34731893 -105584872 + MLT1A2 LTR MaLR 155 374 0 1575 120 32 16 chr10 34731897 34732147 -105584618 + L1MB3 LINE L1 5928 6181 -2 408 291 213 0 chr10 34732823 34732964 -105583801 + MER5A DNA MER1_type 19 189 0 226 374 11 0 chr10 34732964 34733050 -105583715 + MER5A DNA MER1_type 14 100 -89 1299 170 118 15 chr10 34733133 34733404 -105583361 + AluJo SINE Alu 5 303 -9 1829 125 15 95 chr10 34733404 34733731 -105583034 + AluSx SINE Alu 1 301 -11 456 19 0 0 chr10 34733733 34733786 -105582979 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 4588 78 9 0 chr10 34733845 34734394 -105582371 - MER41A LTR ERV1 0 554 1 282 264 89 47 chr10 34735396 34735486 -105581279 + MIR SINE MIR 2 102 -108 1994 130 0 7 chr10 34735486 34735771 -105580994 - AluJb SINE Alu -25 287 5 282 264 89 47 chr10 34735771 34735820 -105580945 + MIR SINE MIR 102 148 -62 2246 137 0 0 chr10 34735946 34736259 -105580506 - AluSq SINE Alu 0 313 1 193 111 0 0 chr10 34736259 34736286 -105580479 - MER5A DNA MER1_type -113 76 50 865 249 38 38 chr10 34736327 34736616 -105580149 - L1MC4a LINE L1 0 7808 7520 1040 155 59 5 chr10 34736674 34736993 -105579772 - AluJo SINE Alu 0 415 87 432 227 87 70 chr10 34737026 34737133 -105579632 - MER5A DNA MER1_type -1 188 84 2127 103 24 0 chr10 34737133 34737423 -105579342 - AluSx SINE Alu -13 299 3 2193 101 14 0 chr10 34737424 34737721 -105579044 - AluSx SINE Alu -11 301 1 432 227 87 70 chr10 34737721 34737796 -105578969 - MER5A DNA MER1_type -104 85 1 1467 166 46 53 chr10 34738587 34738889 -105577876 + AluJo SINE Alu 7 306 -6 2296 86 3 13 chr10 34738912 34739214 -105577551 - AluSp SINE Alu -14 299 1 1936 145 13 59 chr10 34739219 34739263 -105577502 - L1MB2 LINE L1 -2 6169 6125 192 111 0 0 chr10 34739263 34739299 -105577466 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 1311 170 93 4 chr10 34739299 34739558 -105577207 - AluJo SINE Alu -30 282 1 1936 145 13 59 chr10 34739558 34739651 -105577114 - L1MB2 LINE L1 -45 6126 6030 1752 117 23 12 chr10 34739651 34739907 -105576858 - AluSq SINE Alu -54 259 1 1936 145 13 59 chr10 34739907 34740140 -105576625 - L1MB2 LINE L1 -141 6030 5814 710 108 0 0 chr10 34740142 34740244 -105576521 - AluY SINE Alu 0 311 210 1176 147 84 0 chr10 34740246 34740436 -105576329 - L1MB2 LINE L1 -358 5813 5608 2467 66 3 0 chr10 34740439 34740741 -105576024 - AluY SINE Alu -8 303 1 1464 214 3 3 chr10 34740747 34741046 -105575719 - AluJo SINE Alu -13 299 1 570 232 46 0 chr10 34741046 34741197 -105575568 - L1MB2 LINE L1 -979 5167 5010 24 0 0 0 chr10 34741197 34741221 -105575544 + AT_rich Low_complexity Low_complexity 1 24 0 2128 105 3 14 chr10 34741221 34741517 -105575248 - AluSx SINE Alu -14 298 6 2144 133 0 3 chr10 34741524 34741832 -105574933 - AluSx SINE Alu -5 307 1 1731 232 112 18 chr10 34741832 34742236 -105574529 - L1 LINE L1 -1347 4799 4434 1949 129 34 3 chr10 34742236 34742531 -105574234 - AluSq SINE Alu -9 304 1 1731 232 112 18 chr10 34742531 34742558 -105574207 - L1 LINE L1 -1712 4434 4411 345 47 0 0 chr10 34742558 34742601 -105574164 + (TG)n Simple_repeat Simple_repeat 2 44 0 1731 232 112 18 chr10 34742601 34742855 -105573910 - L1 LINE L1 -1735 4411 4009 2767 192 62 114 chr10 34742877 34743289 -105573476 - MER21B LTR ERV1 -54 809 462 2380 95 3 0 chr10 34743289 34743595 -105573170 - AluSp SINE Alu -6 307 1 2767 192 62 114 chr10 34743595 34744035 -105572730 - MER21B LTR ERV1 -401 462 1 1165 205 27 4 chr10 34744036 34744299 -105572466 - L1 LINE L1 -2144 4002 3734 1684 123 67 8 chr10 34744310 34744563 -105572202 + AluSx SINE Alu 1 268 -44 428 236 107 36 chr10 34745105 34745117 -105571648 + MER63 DNA MER1_type 908 918 -143 207 0 0 0 chr10 34745117 34745140 -105571625 + (TA)n Simple_repeat Simple_repeat 2 24 0 2040 119 7 27 chr10 34745141 34745435 -105571330 - AluSx SINE Alu -23 289 2 428 236 107 36 chr10 34745435 34745560 -105571205 + MER63 DNA MER1_type 917 1057 -4 2340 78 20 0 chr10 34745763 34746059 -105570706 + AluSg SINE Alu 1 302 -8 492 287 63 23 chr10 34746126 34746300 -105570465 - MIR SINE MIR -49 213 33 2264 107 0 7 chr10 34746571 34746871 -105569894 + AluSx SINE Alu 1 298 -14 286 253 171 19 chr10 34747130 34747288 -105569477 + MIR SINE MIR 16 197 -65 1713 258 220 9 chr10 34747967 34748904 -105567861 + L2 LINE L2 2176 3312 -1 189 0 0 0 chr10 34749700 34749721 -105567044 + (T)n Simple_repeat Simple_repeat 1 21 0 270 212 64 25 chr10 34750783 34750901 -105565864 + MIR SINE MIR 15 141 -67 2251 118 10 0 chr10 34751804 34752110 -105564655 + AluSx SINE Alu 2 310 -2 2078 120 14 0 chr10 34752259 34752550 -105564215 - AluSq SINE Alu -16 297 3 2069 95 46 11 chr10 34756613 34756746 -105560019 + AluSg SINE Alu 1 128 -182 2281 92 0 29 chr10 34756746 34757062 -105559703 + AluY SINE Alu 1 307 -4 2069 95 46 11 chr10 34757062 34757213 -105559552 + AluSg SINE Alu 128 295 -15 471 230 61 97 chr10 34757354 34757490 -105559275 + MIR3 SINE MIR 12 138 -70 2199 117 0 3 chr10 34757490 34757799 -105558966 + AluSx SINE Alu 1 308 -4 471 230 61 97 chr10 34757799 34757868 -105558897 + MIR3 SINE MIR 138 208 0 216 263 9 97 chr10 34758205 34758319 -105558446 - MIR3 SINE MIR -3 205 102 474 315 80 41 chr10 34758472 34758786 -105557979 + L3 LINE CR1 1155 1480 -97 1991 116 0 33 chr10 34758829 34759131 -105557634 - AluJb SINE Alu -20 292 1 284 53 0 0 chr10 34759350 34759388 -105557377 - AluSx SINE Alu -9 291 254 1662 98 0 5 chr10 34759388 34759603 -105557162 - AluSx SINE Alu -98 214 1 2270 12 0 0 chr10 34759633 34759880 -105556885 - AluYa5 SINE Alu -2 309 63 610 196 120 120 chr10 34760054 34760330 -105556435 + MER46C DNA MER2_type 3 281 -57 2424 76 7 3 chr10 34760330 34760634 -105556131 + AluSg SINE Alu 1 305 -5 610 196 120 120 chr10 34760634 34760658 -105556107 + MER46C DNA MER2_type 280 303 -35 1920 108 16 0 chr10 34761462 34761720 -105555045 + AluSx SINE Alu 29 290 -22 2217 102 0 0 chr10 34761720 34762004 -105554761 + AluSg1 SINE Alu 1 284 -25 2434 76 0 0 chr10 34762398 34762699 -105554066 - AluY SINE Alu -10 301 1 1155 84 0 0 chr10 34762699 34762842 -105553923 - AluSq/x SINE Alu -170 143 1 776 113 0 81 chr10 34763159 34763283 -105553482 - AluSq/x SINE Alu -198 115 2 2230 112 0 7 chr10 34763608 34763911 -105552854 - AluSx SINE Alu -11 301 1 1723 161 46 3 chr10 34764189 34764474 -105552291 + AluJb SINE Alu 1 297 -15 2304 139 54 81 chr10 34765066 34765261 -105551504 + Tigger2a DNA MER2_type 1 200 -2508 1812 170 28 0 chr10 34765261 34765549 -105551216 - AluJb SINE Alu -16 296 1 2304 139 54 81 chr10 34765549 34765799 -105550966 + Tigger2a DNA MER2_type 200 434 0 184 346 49 12 chr10 34765826 34765907 -105550858 + L3b LINE CR1 1426 1509 -74 204 40 0 0 chr10 34767410 34767435 -105549330 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 2145 110 4 0 chr10 34767437 34767718 -105549047 - AluSx SINE Alu -30 282 1 1400 145 32 119 chr10 34770246 34770591 -105546174 - AluYb8 SINE Alu -3 315 1 444 143 0 0 chr10 34770749 34770819 -105545946 + AluS SINE Alu 2 71 -247 771 281 37 53 chr10 34770953 34771252 -105545513 + L1MA9 LINE L1 1079 1372 -5726 2293 97 3 0 chr10 34771259 34771559 -105545206 + AluSg SINE Alu 1 301 -9 1473 301 31 4 chr10 34771977 34772432 -105544333 + L1MA9 LINE L1 1655 2121 -5047 * 2205 199 26 16 chr10 34772430 34772999 -105543766 + L1MA9 LINE L1 3756 4330 -2837 2205 113 7 3 chr10 34772999 34773309 -105543456 + AluSp SINE Alu 2 312 -1 1956 177 0 0 chr10 34773321 34773632 -105543133 + AluJb SINE Alu 1 311 -1 246 128 0 0 chr10 34773635 34773674 -105543091 + (GGAA)n Simple_repeat Simple_repeat 4 42 0 4732 157 32 59 chr10 34773674 34775281 -105541484 + L1MA9 LINE L1 5382 6957 -376 693 61 0 0 chr10 34775281 34775363 -105541402 + Alu SINE Alu 221 302 -10 1624 173 17 75 chr10 34775363 34775402 -105541363 + L1MA9 LINE L1 6947 6987 -346 2280 123 0 0 chr10 34775402 34775712 -105541053 + AluSx SINE Alu 1 310 -2 1624 173 17 75 chr10 34775712 34776083 -105540682 + L1MA9 LINE L1 6987 7333 0 267 207 142 34 chr10 34776206 34776326 -105540439 - L1ME LINE L1 -702 5452 5328 970 306 41 71 chr10 34776339 34777025 -105539740 - HERV16 LTR ERVL -3761 1235 571 314 254 172 8 chr10 34777068 34777202 -105539563 + L1ME LINE L1 5319 5474 -696 286 196 0 0 chr10 34777305 34777361 -105539404 - L1MA9 LINE L1 0 6312 6257 2094 113 0 3 chr10 34777569 34777899 -105538866 + AluSg SINE Alu 1 329 0 2324 92 7 13 chr10 34777901 34778207 -105538558 + AluSp SINE Alu 3 306 -7 1979 242 79 50 chr10 34778209 34778366 -105538399 + L1M2 LINE L1 1622 1773 -4442 2365 90 0 3 chr10 34778366 34778666 -105538099 + AluY SINE Alu 1 299 -12 1979 242 79 50 chr10 34778666 34778966 -105537799 + L1M2 LINE L1 1773 2063 -4152 2221 123 0 0 chr10 34778966 34779268 -105537497 + AluSx SINE Alu 1 302 -10 1979 242 79 50 chr10 34779268 34779793 -105536972 + L1M2 LINE L1 2063 2547 -3668 1009 160 0 0 chr10 34779796 34779952 -105536813 + Tigger1 DNA MER2_type 2 157 -2261 934 141 141 5 chr10 34779947 34780132 -105536633 + Tigger1 DNA MER2_type 2208 2417 -1 * 638 229 10 44 chr10 34780133 34780253 -105536512 + L1M2 LINE L1 2548 2671 -3544 2013 218 33 81 chr10 34780253 34780376 -105536389 - LTR9 LTR ERV1 0 612 485 10498 57 15 40 chr10 34780376 34781792 -105534973 + SVA Other Other 6 1386 0 189 0 0 0 chr10 34781799 34781820 -105534945 + (GA)n Simple_repeat Simple_repeat 2 22 0 2013 218 33 81 chr10 34781820 34782329 -105534436 - LTR9 LTR ERV1 -133 479 3 638 229 10 44 chr10 34782329 34782413 -105534352 + L1M2 LINE L1 2671 2745 -3470 1325 217 68 8 chr10 34782933 34783301 -105533464 + L1M2 LINE L1 2739 3128 -3087 2107 121 4 0 chr10 34783301 34783582 -105533183 + AluSp SINE Alu 1 282 -31 321 26 0 0 chr10 34783585 34783623 -105533142 + (TAA)n Simple_repeat Simple_repeat 2 39 0 3155 145 42 70 chr10 34783627 34784298 -105532467 + LTR8 LTR ERV1 40 691 0 2315 101 0 3 chr10 34784574 34784882 -105531883 - AluSg SINE Alu -3 307 1 1415 90 0 94 chr10 34784939 34785162 -105531603 + AluSp SINE Alu 89 290 -23 803 197 35 0 chr10 34785177 34785319 -105531446 - FRAM SINE Alu -31 145 1 1968 135 34 3 chr10 34786000 34786296 -105530469 + AluSx SINE Alu 4 308 -4 277 105 0 88 chr10 34786414 34786471 -105530294 + MER75 DNA T2_type 453 504 0 1934 165 29 64 chr10 34786554 34787125 -105529640 + MLT2A2 LTR ERVL 1 554 0 747 149 0 0 chr10 34787588 34787695 -105529070 - FLAM_C SINE Alu -35 108 2 1644 174 0 10 chr10 34787733 34788021 -105528744 + AluJo SINE Alu 1 285 -27 1890 103 62 35 chr10 34788027 34788317 -105528448 - AluSg SINE Alu -12 298 1 2408 32 7 4 chr10 34788614 34788928 -105527837 - AluY SINE Alu 0 317 3 2114 101 7 39 chr10 34789193 34789499 -105527266 + AluSp SINE Alu 1 296 -17 988 175 0 44 chr10 34789793 34789976 -105526789 - FRAM SINE Alu -2 174 1 908 163 51 17 chr10 34789979 34790157 -105526608 - MLT1E2 LTR MaLR -440 186 3 2333 67 0 14 chr10 34790373 34790700 -105526065 + AluY SINE Alu 1 311 0 567 99 12 0 chr10 34790700 34790781 -105525984 - MER6A DNA MER2_type -107 498 417 1768 185 23 31 chr10 34790782 34790828 -105525937 - L1 LINE L1 -1780 4366 4321 1415 196 10 20 chr10 34790828 34791124 -105525641 - AluJo SINE Alu -19 293 1 1768 185 23 31 chr10 34791124 34791428 -105525337 - L1 LINE L1 -1825 4321 4019 2630 141 18 18 chr10 34791428 34791692 -105525073 - MER6A DNA MER2_type -429 436 170 3056 82 0 0 chr10 34791692 34792056 -105524709 + THE1B LTR MaLR 1 364 0 2630 141 18 18 chr10 34792056 34792225 -105524540 - MER6A DNA MER2_type -694 171 3 1904 138 50 0 chr10 34792759 34793056 -105523709 - AluSx SINE Alu 0 312 1 472 181 87 27 chr10 34793154 34793303 -105523462 - MER113 DNA MER1_type? -280 241 84 186 338 0 12 chr10 34793520 34793600 -105523165 - L2 LINE L2 -53 3219 3141 1974 138 35 0 chr10 34793630 34793919 -105522846 - AluSx SINE Alu -13 299 1 2071 132 30 0 chr10 34794017 34794312 -105522453 - AluSx SINE Alu -8 304 1 3210 94 2 48 chr10 34794323 34794822 -105521943 - L1PA15 LINE L1 -5 6160 5685 4142 124 58 27 chr10 34794822 34795796 -105520969 - MER11A LTR ERVK -3 1263 1 1653 70 10 0 chr10 34795797 34796171 -105520594 - L1P4 LINE L1 -473 5692 5276 1053 157 61 5 chr10 34796394 34796592 -105520173 - Tigger4(Zombi) DNA MER2_type 0 2731 2523 1023 155 117 0 chr10 34796626 34796832 -105519933 - MER46B DNA MER2_type -131 105 1 1980 151 0 46 chr10 34797868 34798002 -105518763 + AluJo SINE Alu 1 140 -172 2226 125 0 0 chr10 34798002 34798298 -105518467 + AluSq SINE Alu 1 296 -17 1980 151 0 46 chr10 34798298 34798488 -105518277 + AluJo SINE Alu 140 310 -2 514 317 67 5 chr10 34798489 34798595 -105518170 - MIR SINE MIR -12 250 152 189 0 0 0 chr10 34798595 34798616 -105518149 + (TTG)n Simple_repeat Simple_repeat 1 21 0 514 317 67 5 chr10 34798616 34798717 -105518048 - MIR SINE MIR -110 152 30 898 202 11 65 chr10 34799434 34799549 -105517216 + LTR37B LTR ERV1 199 319 -149 1512 161 115 14 chr10 34799549 34799684 -105517081 + AluJo SINE Alu 1 121 -191 1934 127 67 0 chr10 34799684 34799968 -105516797 + AluSx SINE Alu 1 303 -9 1512 161 115 14 chr10 34799968 34800111 -105516654 + AluJo SINE Alu 121 307 -5 898 202 11 65 chr10 34800111 34800257 -105516508 + LTR37B LTR ERV1 319 446 -22 2177 126 79 15 chr10 34800374 34800716 -105516049 + THE1B LTR MaLR 1 364 0 255 360 56 0 chr10 34800716 34800805 -105515960 + MER91A DNA MER1_type 80 173 -23 1873 143 21 3 chr10 34800819 34800943 -105515822 + AluJb SINE Alu 5 125 -187 195 42 0 0 chr10 34800943 34800967 -105515798 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 1873 143 21 3 chr10 34800967 34801128 -105515637 + AluJb SINE Alu 125 295 -17 236 234 21 0 chr10 34801160 34801207 -105515558 + MER91A DNA MER1_type 148 195 -1 2173 116 3 0 chr10 34801492 34801786 -105514979 + AluSx SINE Alu 1 295 -17 1608 187 0 32 chr10 34801792 34802108 -105514657 + AluJb SINE Alu 3 308 -4 1758 164 0 21 chr10 34802341 34802628 -105514137 + AluJb SINE Alu 6 286 -26 2368 93 3 6 chr10 34802853 34803165 -105513600 + AluSq SINE Alu 1 311 -2 1603 138 19 30 chr10 34803393 34803662 -105513103 - AluJo SINE Alu -46 266 1 322 296 10 10 chr10 34803773 34803871 -105512894 + MER5A DNA MER1_type 9 106 -83 428 182 11 0 chr10 34803900 34803988 -105512777 - FLAM_A SINE Alu -53 89 1 908 183 21 5 chr10 34804474 34804660 -105512105 - MER5A DNA MER1_type 0 189 1 605 165 0 19 chr10 34804660 34804763 -105512002 + FRAM SINE Alu 63 163 -13 8118 45 0 16 chr10 34804771 34805853 -105510912 + L1PA5 LINE L1 4408 5466 -711 2629 46 3 3 chr10 34805853 34806159 -105510606 + AluY SINE Alu 1 306 -5 8118 45 0 16 chr10 34806159 34806860 -105509905 + L1PA5 LINE L1 5466 6177 0 1726 158 70 15 chr10 34807445 34807787 -105508978 - MLT1A1 LTR MaLR 0 365 5 2329 72 0 23 chr10 34808102 34808406 -105508359 - AluY SINE Alu -14 297 1 376 250 8 42 chr10 34808478 34808598 -105508167 - L1ME4a LINE L1 -265 5856 5741 17091 67 9 6 chr10 34908939 34911273 -105405492 - L1P LINE L1 -2819 3327 988 17845 56 18 0 chr10 34911375 34913673 -105403092 + L1P LINE L1 437 2775 -3371 2008 81 44 7 chr10 34913673 34913945 -105402820 + AluY SINE Alu 1 282 -29 3131 153 40 13 chr10 34914045 34914837 -105401928 - L1M2 LINE L1 -697 5594 4783 18471 58 7 3 chr10 34914854 34918052 -105398713 - L1PA7 LINE L1 -13 6141 2934 6811 153 9 15 chr10 34918152 34918495 -105398270 - L1P4 LINE L1 -504 5664 5321 2151 92 7 36 chr10 34918495 34918800 -105397965 - AluSx SINE Alu -16 296 1 6811 153 9 15 chr10 34918800 34920036 -105396729 - L1P4 LINE L1 -847 5321 4086 214 367 112 24 chr10 34920040 34920209 -105396556 + MER5A DNA MER1_type 2 185 -4 1029 233 75 130 chr10 34920553 34921353 -105395412 - LTR41 LTR ERVL -10 763 8 447 229 146 35 chr10 34922778 34922922 -105393843 - MER3 DNA MER1_type 0 209 50 771 274 39 47 chr10 34923297 34923552 -105393213 - MIR SINE MIR -4 258 6 22 70 0 0 chr10 34923934 34923977 -105392788 + AT_rich Low_complexity Low_complexity 1 43 0 1715 170 7 10 chr10 34923977 34924283 -105392482 - AluJo SINE Alu -6 306 2 2352 80 6 46 chr10 34925600 34925925 -105390840 - AluSx SINE Alu 0 312 1 538 243 88 17 chr10 34926663 34926844 -105389921 - L1M4 LINE L1 -6167 862 669 6874 203 45 25 chr10 34927276 34928603 -105388162 - L1MC2 LINE L1 -9 6335 5036 2220 80 25 0 chr10 34928603 34928889 -105387876 - AluSg SINE Alu -17 293 1 6874 203 45 25 chr10 34928889 34930542 -105386223 - L1MC2 LINE L1 -1308 5036 3295 6965 208 60 74 chr10 34930546 34931705 -105385060 - L1 LINE L1 -1932 4450 3276 195 42 0 0 chr10 34931705 34931729 -105385036 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 802 221 7 0 chr10 34931729 34931874 -105384891 - FRAM SINE Alu -30 146 1 6965 208 60 74 chr10 34931874 34933595 -105383170 - L1 LINE L1 -3105 3277 1223 765 139 0 0 chr10 34933595 34933717 -105383048 - L1PB4 LINE L1 -7 6149 6028 6965 208 60 74 chr10 34933717 34933916 -105382849 - L1 LINE L1 -5159 1223 1023 * 38251 50 5 2 chr10 34933887 34939547 -105377218 - L1PA4 LINE L1 -1 6390 713 27 29 0 0 chr10 34939853 34939887 -105376878 + AT_rich Low_complexity Low_complexity 1 34 0 5488 159 20 28 chr10 34940250 34941820 -105374945 - L1MA5 LINE L1 -6 6294 4743 267 79 0 0 chr10 34941827 34941865 -105374900 + (TG)n Simple_repeat Simple_repeat 1 38 0 1116 145 0 17 chr10 34941866 34942038 -105374727 - FRAM SINE Alu -14 162 1 1629 188 23 50 chr10 34942038 34942630 -105374135 - L1M4 LINE L1 -1400 4746 4194 383 313 49 6 chr10 34942835 34942998 -105373767 - L1M4 LINE L1 -6282 464 295 243 0 0 0 chr10 34943030 34943057 -105373708 + (T)n Simple_repeat Simple_repeat 1 27 0 431 320 99 27 chr10 34943071 34943405 -105373360 + L1M4 LINE L1 4598 4955 -1191 718 225 21 27 chr10 34944132 34944319 -105372446 - MER5A DNA MER1_type -1 188 3 1846 141 0 3 chr10 34944543 34944834 -105371931 - MER47A DNA MER2_type -2 364 75 498 179 0 0 chr10 34945067 34945162 -105371603 + (TA)n Simple_repeat Simple_repeat 1 95 0 312 276 0 31 chr10 34945083 34945161 -105371604 - L1MC4 LINE L1 -1340 6702 6626 * 2469 75 0 0 chr10 34945161 34945455 -105371310 - AluSp SINE Alu -19 294 1 312 276 0 31 chr10 34945455 34945474 -105371291 - L1MC4 LINE L1 -1416 6626 6608 1501 188 36 14 chr10 34945530 34945806 -105370959 + AluJo SINE Alu 1 282 -30 28 29 0 0 chr10 34945824 34945859 -105370906 + AT_rich Low_complexity Low_complexity 1 35 0 431 321 117 0 chr10 34947472 34947668 -105369097 + L2 LINE L2 692 910 -2404 283 344 29 48 chr10 34947718 34947880 -105368885 + L2 LINE L2 1428 1587 -1727 1624 169 7 17 chr10 34947880 34948194 -105368571 - AluJb SINE Alu 0 311 1 283 344 29 48 chr10 34948194 34948302 -105368463 + L2 LINE L2 1587 1695 -1619 1083 345 95 16 chr10 34948710 34949449 -105367316 + L2 LINE L2 1815 2611 -703 2024 106 0 10 chr10 34949647 34949950 -105366815 - L1PA14 LINE L1 0 6161 5862 352 330 48 9 chr10 34950323 34950553 -105366212 - L1M4 LINE L1 -6599 250 12 2342 96 0 3 chr10 34950790 34951093 -105365672 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr10 34951342 34951363 -105365402 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 34952317 34952339 -105364426 + AT_rich Low_complexity Low_complexity 1 22 0 213 108 0 0 chr10 34952842 34952879 -105363886 + (TG)n Simple_repeat Simple_repeat 2 38 0 187 344 0 16 chr10 34953054 34953118 -105363647 + MIR SINE MIR 69 131 -131 2120 128 0 0 chr10 34954063 34954368 -105362397 + AluSx SINE Alu 1 305 -7 1279 238 102 83 chr10 34955092 34955479 -105361286 - MLT1E1 LTR MaLR -1 653 248 1590 178 3 31 chr10 34955479 34955766 -105360999 - AluJo SINE Alu -33 279 1 1279 238 102 83 chr10 34955766 34956016 -105360749 - MLT1E1 LTR MaLR -406 248 4 26 39 0 20 chr10 34956019 34956042 -105360723 + AT_rich Low_complexity Low_complexity 1 23 -27 1219 86 6 0 chr10 34956042 34956216 -105360549 - L1MA3 LINE L1 -1 6304 6130 26 39 0 20 chr10 34956216 34956243 -105360522 + AT_rich Low_complexity Low_complexity 23 50 0 1457 132 0 0 chr10 34956243 34956470 -105360295 - L1PB1 LINE L1 -8 6859 6633 3242 133 18 36 chr10 34956485 34957041 -105359724 - LTR10A LTR ERV1 -63 546 1 15146 187 22 4 chr10 34957085 34962207 -105354558 - L1PB1 LINE L1 -230 6637 1427 450 141 0 0 chr10 34962224 34962295 -105354470 - L1PB1 LINE L1 -5700 1163 1093 2611 234 83 25 chr10 34962297 34963183 -105353582 - L1PB1 LINE L1 -5816 1047 110 * 3396 108 40 6 chr10 34963160 34963688 -105353077 - L1MA3 LINE L1 -160 6861 6316 2261 102 0 0 chr10 34963689 34963983 -105352782 - AluSc SINE Alu -15 294 1 290 245 63 31 chr10 34964180 34964332 -105352433 - MLT1H LTR MaLR 0 586 428 545 282 60 34 chr10 34964332 34964566 -105352199 - MLT1H LTR MaLR -227 322 83 390 268 71 24 chr10 34964689 34964857 -105351908 - MLT1J LTR MaLR -2 509 334 2154 269 61 40 chr10 34965621 34966135 -105350630 - L1ME LINE L1 -4715 1365 863 1532 180 14 32 chr10 34966135 34966418 -105350347 - AluJo SINE Alu -20 292 15 2154 269 61 40 chr10 34966418 34967115 -105349650 - L1ME LINE L1 -5217 863 129 43913 36 6 3 chr10 34967117 34973254 -105343511 + L1PA3 LINE L1 1 6154 -1 843 173 12 36 chr10 34973265 34973433 -105343332 + FRAM SINE Alu 1 161 -15 359 261 130 0 chr10 34973445 34973560 -105343205 - L1ME LINE L1 -5935 135 6 22 0 0 0 chr10 34974215 34974237 -105342528 + AT_rich Low_complexity Low_complexity 1 22 0 404 305 102 28 chr10 34974683 34975047 -105341718 + L1ME4a LINE L1 5533 5923 -198 1314 181 0 9 chr10 34975068 34975294 -105341471 + AluJb SINE Alu 1 224 -88 233 167 56 0 chr10 34975308 34975434 -105341331 + (TA)n Simple_repeat Simple_repeat 1 133 0 224 40 80 0 chr10 34975481 34975531 -105341234 + (TA)n Simple_repeat Simple_repeat 2 55 0 2357 87 0 0 chr10 34976446 34976744 -105340021 - AluSc SINE Alu -11 298 1 215 284 177 21 chr10 34977188 34977329 -105339436 - MIR SINE MIR -71 191 29 2269 122 0 3 chr10 34977855 34978167 -105338598 - AluSq SINE Alu -2 311 1 225 121 0 0 chr10 34978245 34978278 -105338487 - L1PA7 LINE L1 -12 6142 6110 423 334 132 31 chr10 34978293 34978739 -105338026 + L2 LINE L2 2026 2516 -798 885 303 102 25 chr10 34978886 34979279 -105337486 - MLT1J1 LTR MaLR -23 423 1 2199 93 10 20 chr10 34979446 34979748 -105337017 - AluSx SINE Alu -13 299 1 250 216 40 27 chr10 34979962 34980036 -105336729 + MER41A LTR ERV1 397 471 -83 31 26 0 0 chr10 34980511 34980549 -105336216 + AT_rich Low_complexity Low_complexity 1 38 0 2399 90 0 3 chr10 34981306 34981617 -105335148 - AluSq SINE Alu -3 310 1 392 333 22 15 chr10 34982253 34982388 -105334377 - L2 LINE L2 -15 3257 3122 194 93 0 47 chr10 34982745 34982788 -105333977 + (TTATA)n Simple_repeat Simple_repeat 4 44 0 351 320 101 28 chr10 34983364 34983611 -105333154 - L2 LINE L2 -4 3309 3045 1360 221 0 0 chr10 34984987 34985254 -105331511 - AluJb SINE Alu -9 303 37 2023 100 44 4 chr10 34985520 34985813 -105330952 + AluSg SINE Alu 1 304 0 3562 132 11 4 chr10 34986710 34987233 -105329532 - MER1A DNA MER1_type 0 527 1 632 237 79 0 chr10 34987977 34988129 -105328636 - MER68 LTR ERV1 0 562 399 389 321 76 43 chr10 34988578 34988855 -105327910 - L3b LINE CR1 -196 1387 1102 393 141 0 0 chr10 34989845 34989916 -105326849 + (TCC)n Simple_repeat Simple_repeat 3 73 0 306 0 0 0 chr10 34990547 34990581 -105326184 + (TA)n Simple_repeat Simple_repeat 1 34 0 2417 83 10 0 chr10 34992916 34993218 -105323547 + AluSg SINE Alu 1 305 -5 2514 58 0 0 chr10 34993518 34993813 -105322952 - AluY SINE Alu -16 295 1 7028 56 1 1 chr10 34993816 34995292 -105321473 - L1PA7 LINE L1 -2 6152 4678 836 111 52 52 chr10 34995497 34995669 -105321096 - L1MB4 LINE L1 -15 6165 5994 1845 201 48 16 chr10 34995669 34996043 -105320722 - MSTD LTR MaLR -10 386 1 2513 228 41 21 chr10 34996052 34996311 -105320454 - L1M4 LINE L1 -1842 5723 5471 1757 168 103 28 chr10 34996311 34996709 -105320056 + MSTC LTR MaLR 1 428 0 2513 228 41 21 chr10 34996709 34997294 -105319471 - L1M4 LINE L1 -2094 5471 4862 3554 89 44 12 chr10 34997314 34997877 -105318888 - L1MA3 LINE L1 -7 6298 5718 7454 130 27 40 chr10 34997883 34998760 -105318005 - L1M4 LINE L1 -3382 4183 3297 186 103 0 0 chr10 34998760 34998789 -105317976 + (CAA)n Simple_repeat Simple_repeat 2 30 0 7454 130 27 40 chr10 34998789 34999810 -105316955 - L1M4 LINE L1 -4268 3297 2306 1046 77 53 68 chr10 34999912 35000119 -105316646 + L1M1 LINE L1 3266 3469 -4096 * 1499 171 30 0 chr10 35000112 35000376 -105316389 - L1M4 LINE L1 -6195 1370 1099 611 134 42 8 chr10 35000373 35000492 -105316273 - L1M4 LINE L1 -7432 133 11 * 1070 220 84 21 chr10 35000494 35001007 -105315758 - L1 LINE L1 -2687 4480 3936 * 38117 70 8 3 chr10 35000996 35007117 -105309648 - L1PA5 LINE L1 -6 6148 1 848 154 11 6 chr10 35007118 35007293 -105309472 - L1 LINE L1 -4835 2263 2088 415 325 19 24 chr10 35007294 35007506 -105309259 - L1 LINE L1 -5221 1947 1737 257 323 32 25 chr10 35008651 35008809 -105307956 - L1 LINE L1 -5981 1117 959 2406 61 0 7 chr10 35008998 35009293 -105307472 + AluY SINE Alu 1 293 -18 324 309 149 11 chr10 35010076 35010251 -105306514 + MIR SINE MIR 61 259 -3 22 35 0 0 chr10 35010501 35010530 -105306235 + AT_rich Low_complexity Low_complexity 1 29 0 3316 144 29 15 chr10 35010728 35011346 -105305419 + L1MB2 LINE L1 5544 6170 -1 4134 156 76 32 chr10 35011429 35012875 -105303890 - L1MA7 LINE L1 0 6291 4783 26787 78 7 3 chr10 35012883 35017587 -105299178 - L1PA7 LINE L1 -3 6151 1433 9804 62 4 78 chr10 35018082 35019524 -105297241 - SVA Other Other 0 1386 52 234 0 0 0 chr10 35019524 35019550 -105297215 + (GGGAGA)n Simple_repeat Simple_repeat 1 26 0 5868 130 53 23 chr10 35019550 35020996 -105295769 - L1PA7 LINE L1 -4686 1460 13 9691 190 40 41 chr10 35021002 35022599 -105294166 - L1MA7 LINE L1 -1351 4795 3198 2414 71 14 0 chr10 35022599 35022896 -105293869 - AluY SINE Alu -10 301 1 9691 190 40 41 chr10 35022896 35023652 -105293113 - L1MA7 LINE L1 -2948 3198 2443 254 25 0 50 chr10 35023652 35023692 -105293073 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 7261 71 12 213 chr10 35023692 35025337 -105291428 - SVA Other Other -23 1363 51 180 0 0 0 chr10 35025340 35025360 -105291405 + (GGGAGA)n Simple_repeat Simple_repeat 1 20 0 9691 190 40 41 chr10 35025360 35025517 -105291248 - L1MA7 LINE L1 -3704 2442 2286 2122 74 0 0 chr10 35025517 35025774 -105290991 - AluSc SINE Alu -52 257 1 9691 190 40 41 chr10 35025774 35025939 -105290826 - L1MA7 LINE L1 -3860 2286 2116 2055 137 3 0 chr10 35025941 35026233 -105290532 - AluSx SINE Alu -19 293 1 3204 177 40 52 chr10 35026247 35027100 -105289665 + L1MA10 LINE L1 3875 4717 -1429 2221 97 0 32 chr10 35027106 35027415 -105289350 - AluSx SINE Alu -12 300 2 1000 112 0 0 chr10 35027416 35027550 -105289215 - AluSx SINE Alu -10 302 169 471 145 0 0 chr10 35027550 35027619 -105289146 - AluSx SINE Alu -244 69 1 2993 209 94 28 chr10 35027622 35029099 -105287666 + L1MA10 LINE L1 4722 6298 -36 23 0 0 0 chr10 35029574 35029597 -105287168 + AT_rich Low_complexity Low_complexity 1 23 0 419 283 134 24 chr10 35030998 35031615 -105285150 + L1ME LINE L1 4932 5712 -458 6676 208 41 24 chr10 35031679 35032669 -105284096 + L1MC4a LINE L1 3330 4302 -1876 1712 224 58 13 chr10 35032669 35033116 -105283649 + MLT1C LTR MaLR 1 467 0 6676 208 41 24 chr10 35033116 35033307 -105283458 + L1MC4a LINE L1 4302 4488 -1690 1716 162 17 26 chr10 35033307 35033609 -105283156 - AluJo SINE Alu -13 299 1 6676 208 41 24 chr10 35033609 35034024 -105282741 + L1MC4a LINE L1 4488 4894 -1284 2357 70 13 0 chr10 35034024 35034322 -105282443 - AluY SINE Alu -9 302 1 6676 208 41 24 chr10 35034322 35034770 -105281995 + L1MC4a LINE L1 4894 5333 -845 2266 110 0 0 chr10 35034770 35035071 -105281694 - AluSx SINE Alu -11 301 1 6676 208 41 24 chr10 35035071 35035466 -105281299 + L1MC4a LINE L1 5333 5815 -363 323 283 7 3 chr10 35035541 35035691 -105281074 + MER58A DNA MER1_type 6 203 -21 368 272 59 15 chr10 35035700 35035836 -105280929 + L1MC4a LINE L1 5792 5933 -1875 1896 26 0 13 chr10 35036033 35036265 -105280500 + L1PA4 LINE L1 5924 6152 -3 17751 165 42 11 chr10 35038069 35041747 -105275018 - L1MA2 LINE L1 0 7723 4160 2088 123 0 10 chr10 35041747 35042047 -105274718 + AluSx SINE Alu 1 297 -15 17751 165 42 11 chr10 35042047 35043584 -105273181 - L1MA2 LINE L1 -3563 4160 2672 1179 64 6 0 chr10 35043584 35043741 -105273024 + L1PA6 LINE L1 5997 6154 0 17751 165 42 11 chr10 35043741 35045979 -105270786 - L1MA2 LINE L1 -5051 2672 25 254 250 69 9 chr10 35046348 35046360 -105270405 - L1MA5 LINE L1 0 6300 6289 4864 154 16 88 chr10 35046360 35046745 -105270020 - L1PB4 LINE L1 0 6156 5745 2622 73 20 6 chr10 35046745 35047103 -105269662 - L1PB1 LINE L1 0 6151 5789 228 241 0 0 chr10 35047109 35047167 -105269598 + (TATATG)n Simple_repeat Simple_repeat 4 61 0 4864 154 16 88 chr10 35047167 35047487 -105269278 - L1PB4 LINE L1 -416 5740 5398 228 35 0 0 chr10 35047487 35047516 -105269249 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2023 127 3 3 chr10 35047519 35047803 -105268962 - AluSg SINE Alu -26 284 1 4864 154 16 88 chr10 35047803 35049280 -105267485 - L1PB4 LINE L1 -760 5396 4115 1584 31 0 0 chr10 35049279 35049472 -105267293 + L1P LINE L1 2687 2879 -3267 * 6205 210 36 18 chr10 35049572 35049915 -105266850 - L1M4 LINE L1 -2021 4307 3972 1724 200 0 3 chr10 35049915 35050210 -105266555 - AluJb SINE Alu -18 294 1 6205 210 36 18 chr10 35050210 35052033 -105264732 - L1M4 LINE L1 -2356 3972 2183 297 0 0 0 chr10 35052033 35052066 -105264699 + (CA)n Simple_repeat Simple_repeat 2 34 0 6205 210 36 18 chr10 35052066 35054001 -105262764 - L1M4 LINE L1 -4145 2183 75 3325 166 79 56 chr10 35054121 35054855 -105261910 - MER4E LTR ERV1 -26 753 3 785 288 43 43 chr10 35054918 35055293 -105261472 + LTR38 LTR ERV1 129 503 -53 15798 185 54 19 chr10 35055300 35059888 -105256877 - L1PA15 LINE L1 -11 6154 1407 24490 55 9 2 chr10 35060229 35063907 -105252858 - L1PA5 LINE L1 -280 5874 2174 37130 78 17 3 chr10 35064023 35069095 -105247670 - L1P LINE L1 -1000 5146 2 2463 233 70 28 chr10 35069099 35070129 -105246636 - L1P LINE L1 -1103 5279 4293 835 167 13 13 chr10 35070129 35070285 -105246480 - L1PB3 LINE L1 -2 6152 5997 2463 233 70 28 chr10 35070285 35071055 -105245710 - L1P LINE L1 -2089 4293 2132 1647 223 52 9 chr10 35071055 35071578 -105245187 - L1M4c LINE L1 -4252 2394 1753 1738 143 8 0 chr10 35071586 35071838 -105244927 - AluSx SINE Alu -58 254 1 372 242 38 32 chr10 35071846 35072003 -105244762 - L1M4c LINE L1 -6380 162 5 6150 63 7 75 chr10 35072003 35072890 -105243875 + LTR12 LTR ERV1 1 826 0 317 202 58 39 chr10 35072890 35072994 -105243771 - L1M4c LINE L1 -6435 107 2 25 0 0 0 chr10 35073050 35073075 -105243690 + AT_rich Low_complexity Low_complexity 1 25 0 577 241 133 0 chr10 35073097 35073255 -105243510 + MIR SINE MIR 53 231 -31 13036 189 38 14 chr10 35073295 35075409 -105241356 - L1MA4A LINE L1 -12 6291 4229 1952 185 83 5 chr10 35075409 35075804 -105240961 + MSTB LTR MaLR 1 426 0 9146 154 45 4 chr10 35075804 35076308 -105240457 + MSTB-int LTR MaLR 1 483 -1168 198 0 0 0 chr10 35076308 35076330 -105240435 + (GAAAA)n Simple_repeat Simple_repeat 5 26 0 9146 154 45 4 chr10 35076330 35077411 -105239354 + MSTB-int LTR MaLR 483 1651 0 2197 176 60 2 chr10 35077411 35077814 -105238951 + MSTB LTR MaLR 1 426 0 13036 189 38 14 chr10 35077814 35079004 -105237761 - L1MA4A LINE L1 -2074 4229 2865 2015 136 3 0 chr10 35079004 35079305 -105237460 - AluSx SINE Alu -7 305 4 13036 189 38 14 chr10 35079305 35080065 -105236700 - L1MA4A LINE L1 -3438 2865 2125 1913 120 25 0 chr10 35080067 35080350 -105236415 + MSTA LTR MaLR 1 290 -138 596 276 0 0 chr10 35080343 35080470 -105236295 - Tigger7 DNA MER2_type -275 275 149 * 297 109 0 0 chr10 35080478 35080524 -105236241 + (TG)n Simple_repeat Simple_repeat 1 46 0 2498 69 0 0 chr10 35080567 35080871 -105235894 - AluY SINE Alu -7 304 1 22235 89 11 15 chr10 35080896 35085003 -105231762 - L1PA7 LINE L1 -7 6147 2059 581 177 146 0 chr10 35085008 35085138 -105231627 - L1PB4 LINE L1 -28 6128 5980 325 315 110 7 chr10 35085144 35085290 -105231475 + L1M4 LINE L1 1296 1456 -5753 6390 222 101 35 chr10 35085292 35089572 -105227193 - L1PB4 LINE L1 -180 6679 1979 271 274 44 22 chr10 35089721 35089856 -105226909 + L1M4 LINE L1 5274 5411 -1797 22 0 0 0 chr10 35089937 35089959 -105226806 + AT_rich Low_complexity Low_complexity 1 22 0 259 233 68 0 chr10 35090073 35090146 -105226619 + L1M4 LINE L1 5817 5894 -1314 1239 150 5 45 chr10 35090146 35090366 -105226399 - AluJo SINE Alu -101 211 1 2278 131 0 0 chr10 35090378 35090690 -105226075 - AluSx SINE Alu 0 312 1 403 271 25 8 chr10 35091506 35091628 -105225137 - MER94 DNA DNA -10 124 1 2505 140 30 137 chr10 35091881 35092458 -105224307 - MLT2B2 LTR ERVL 0 515 1 1024 209 43 0 chr10 35093044 35093254 -105223511 - MER20 DNA MER1_type 0 219 1 316 235 3 26 chr10 35093342 35093437 -105223328 + L1M4 LINE L1 3781 3874 -2272 802 271 77 77 chr10 35094012 35094098 -105222667 + L2 LINE L2 2359 2444 -870 2193 182 32 7 chr10 35094098 35094510 -105222255 - MSTB LTR MaLR -4 422 1 802 271 77 77 chr10 35094510 35094811 -105221954 + L2 LINE L2 2443 2746 -568 273 273 50 10 chr10 35095024 35095123 -105221642 - MLT1J LTR MaLR -73 438 336 1815 217 57 57 chr10 35095224 35095841 -105220924 - L1 LINE L1 -746 5400 4784 22 0 0 0 chr10 35095841 35095863 -105220902 + AT_rich Low_complexity Low_complexity 1 22 0 30 0 0 0 chr10 35095892 35095922 -105220843 + AT_rich Low_complexity Low_complexity 1 30 0 11114 187 45 12 chr10 35095922 35099803 -105216962 - L1MA7 LINE L1 0 6877 2894 836 299 26 15 chr10 35099800 35100071 -105216694 - L1MA7 LINE L1 -5465 1188 915 * 226 344 11 11 chr10 35100284 35100374 -105216391 - L1MA7 LINE L1 -6283 370 281 738 292 164 31 chr10 35100389 35100742 -105216023 - L1M3de LINE L1 -5634 1019 620 265 200 40 0 chr10 35100748 35100823 -105215942 + L1MC4 LINE L1 6624 6701 -1341 682 287 58 0 chr10 35100982 35101205 -105215560 + L1 LINE L1 2478 2713 -3433 539 251 271 40 chr10 35101291 35101594 -105215171 + MLT1G LTR MaLR 14 386 -204 3195 230 96 39 chr10 35101594 35102818 -105213947 - L1MEc LINE L1 -962 5253 3960 1604 240 33 52 chr10 35102885 35103526 -105213239 - L1MEc LINE L1 -2991 3224 2596 357 197 0 0 chr10 35103539 35103605 -105213160 - MER76 LTR ERV -622 66 1 246 105 0 0 chr10 35103672 35103710 -105213055 + (CA)n Simple_repeat Simple_repeat 1 38 0 571 292 21 21 chr10 35103733 35103973 -105212792 - L1MC4a LINE L1 -1192 6616 6377 414 185 0 0 chr10 35104139 35104220 -105212545 + (TG)n Simple_repeat Simple_repeat 2 82 0 440 277 116 63 chr10 35104225 35104528 -105212237 - L1MC4a LINE L1 -1637 6171 5853 2301 104 0 0 chr10 35104865 35105162 -105211603 - AluSg SINE Alu -13 297 1 23 54 0 0 chr10 35105638 35105675 -105211090 + AT_rich Low_complexity Low_complexity 1 37 0 290 312 26 11 chr10 35105757 35105946 -105210819 - L1MEc LINE L1 -3572 2643 2452 520 191 0 0 chr10 35105991 35106080 -105210685 + FLAM_C SINE Alu 22 110 -33 203 0 68 45 chr10 35106091 35106135 -105210630 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 239 272 75 43 chr10 35106140 35106394 -105210371 - L1MEc LINE L1 -3937 2459 2198 41320 48 6 27 chr10 35106696 35110097 -105206668 - L1PA4 LINE L1 0 6155 2942 2132 77 42 7 chr10 35110097 35110384 -105206381 - AluY SINE Alu -14 297 1 41320 48 6 27 chr10 35110384 35113262 -105203503 - L1PA4 LINE L1 -3213 2942 7 27 0 0 0 chr10 35113393 35113420 -105203345 + AT_rich Low_complexity Low_complexity 1 27 0 552 293 53 33 chr10 35113548 35113999 -105202766 - L1M4 LINE L1 -3570 2576 2117 33 73 0 0 chr10 35114293 35114361 -105202404 + AT_rich Low_complexity Low_complexity 1 68 0 2308 179 30 18 chr10 35114522 35115006 -105201759 - L1MA6 LINE L1 0 6300 5808 1822 163 25 31 chr10 35115006 35115363 -105201402 + THE1A LTR MaLR 1 355 0 2308 179 30 18 chr10 35115363 35115381 -105201384 - L1MA6 LINE L1 -492 5808 5792 641 89 0 11 chr10 35115381 35115471 -105201294 + MSTA LTR MaLR 340 428 0 1519 150 11 4 chr10 35115471 35115744 -105201021 + L1M1 LINE L1 5308 5582 -721 * 5280 198 22 18 chr10 35115735 35117031 -105199734 - L1 LINE L1 -2250 3896 2596 5137 137 12 0 chr10 35117034 35117682 -105199083 - L1PA16 LINE L1 -1 6165 5526 1860 155 0 10 chr10 35117682 35117978 -105198787 + AluSx SINE Alu 1 293 -19 5137 137 12 0 chr10 35117978 35118957 -105197808 - L1PA16 LINE L1 -640 5526 4537 2908 93 7 14 chr10 35118958 35119377 -105197388 - L1PA11 LINE L1 -457 5717 5302 3116 116 17 4 chr10 35119377 35119847 -105196918 + L1PA11 LINE L1 5694 6174 0 3150 247 26 13 chr10 35119847 35120910 -105195855 - L1PA12 LINE L1 -4313 3271 2182 243 368 11 0 chr10 35121157 35121252 -105195513 - L1PA12 LINE L1 -5401 2180 2085 779 346 48 46 chr10 35121375 35121984 -105194781 - L1PA12 LINE L1 -6177 1397 788 3323 98 8 0 chr10 35121989 35122471 -105194294 - LTR19A LTR ERV1 0 486 1 2878 219 46 11 chr10 35122479 35123658 -105193107 - L1 LINE L1 -3537 4028 2804 1167 242 89 58 chr10 35123672 35124134 -105192631 - L1 LINE L1 -7069 496 21 4858 238 44 33 chr10 35124289 35125783 -105190982 - L1M4 LINE L1 -4839 2624 1114 1579 178 45 32 chr10 35125819 35126033 -105190732 - L1M2 LINE L1 -718 5573 5363 1846 142 0 62 chr10 35126033 35126357 -105190408 - AluSx SINE Alu -8 304 1 1579 178 45 32 chr10 35126357 35126676 -105190089 - L1M2 LINE L1 -928 5363 5024 1806 148 21 33 chr10 35126685 35126856 -105189909 + L1MA9 LINE L1 5579 5751 -561 2432 109 25 0 chr10 35126856 35127222 -105189543 - THE1C LTR MaLR 0 375 1 10278 109 43 8 chr10 35127222 35128749 -105188016 - THE1C-int LTR MaLR 0 1580 1 2351 145 11 3 chr10 35128749 35129121 -105187644 - THE1C LTR MaLR 0 375 1 1806 148 21 33 chr10 35129121 35129284 -105187481 + L1MA9 LINE L1 5748 5911 -401 * 2498 196 53 16 chr10 35129282 35129965 -105186800 - L1M2 LINE L1 -2714 3432 2725 699 148 26 0 chr10 35129970 35130085 -105186680 - Tigger1 DNA MER2_type -1 2417 2300 2785 111 13 29 chr10 35130089 35130541 -105186224 + L1P4 LINE L1 5254 5698 -465 420 200 12 0 chr10 35130541 35130626 -105186139 - L1M4 LINE L1 -6419 1146 1061 4970 12 0 0 chr10 35130636 35131200 -105185565 - L1PA3 LINE L1 -1 6154 5591 4537 16 9 0 chr10 35131200 35131933 -105184832 + L1PA3 LINE L1 4856 5592 -563 * 5895 183 39 5 chr10 35131927 35132952 -105183813 - L1M4 LINE L1 -6487 1078 19 308 263 64 104 chr10 35133908 35134265 -105182500 - L1MC4a LINE L1 -1786 6022 5680 25 31 0 0 chr10 35134287 35134319 -105182446 + AT_rich Low_complexity Low_complexity 1 32 0 4534 221 68 77 chr10 35134713 35136887 -105179878 - L1MA8 LINE L1 -1 6290 4190 13747 40 5 5 chr10 35136887 35139343 -105177422 - L1PA5 LINE L1 0 6154 3699 4534 221 68 77 chr10 35139343 35140315 -105176450 - L1MA8 LINE L1 -2101 4190 3211 2985 9 0 0 chr10 35140905 35141240 -105175525 - L1PA3 LINE L1 -4 6151 5817 541 205 22 89 chr10 35141240 35141464 -105175301 - L1M4 LINE L1 -2935 4232 4024 2900 158 74 2 chr10 35141465 35142016 -105174749 + Tigger3(Golem) DNA MER2_type 2433 3023 -6 828 314 32 16 chr10 35142024 35142616 -105174149 - L1M4 LINE L1 -4945 2153 1534 2388 199 101 27 chr10 35143455 35144158 -105172607 - L1 LINE L1 -1140 5070 4309 345 47 0 0 chr10 35144158 35144201 -105172564 + (TG)n Simple_repeat Simple_repeat 2 44 0 2388 199 101 27 chr10 35144201 35144230 -105172535 - L1 LINE L1 -1901 4309 4284 3083 258 62 56 chr10 35144283 35145292 -105171473 - L1 LINE L1 -2657 3553 2551 260 32 0 0 chr10 35145292 35145323 -105171442 - AluY SINE Alu -15 287 257 3083 258 62 56 chr10 35145323 35146190 -105170575 - L1 LINE L1 -3659 2551 1690 7895 32 6 0 chr10 35146190 35147905 -105168860 + L1PA3 LINE L1 4434 6155 0 3083 258 62 56 chr10 35147905 35149509 -105167256 - L1 LINE L1 -4520 1690 1 300 264 40 65 chr10 35149690 35149862 -105166903 - HERVL LTR ERVL -2769 2761 902 1346 71 82 11 chr10 35150955 35151139 -105165626 - L1PA6 LINE L1 0 6154 5958 265 289 14 63 chr10 35151780 35151922 -105164843 - MER76 LTR ERV -274 414 280 613 300 48 48 chr10 35151999 35152249 -105164516 - MER76 LTR ERV -438 250 1 282 308 46 21 chr10 35152252 35152265 -105164500 - L1MC4a LINE L1 -1233 6575 6564 441 0 0 0 chr10 35152265 35152314 -105164451 + (CA)n Simple_repeat Simple_repeat 2 50 0 282 308 46 21 chr10 35152314 35152530 -105164235 - L1MC4a LINE L1 -1244 6564 6450 5644 125 22 0 chr10 35152547 35154220 -105162545 - L1PA15 LINE L1 -7 6158 4438 1312 276 33 102 chr10 35154230 35155236 -105161529 - L1PA12 LINE L1 -5831 1750 7 676 222 95 128 chr10 35155426 35155879 -105160886 - L1MC4a LINE L1 -1578 6230 5799 1695 55 0 15 chr10 35155879 35156078 -105160687 - MER107 DNA MER1_type 0 197 2 676 222 95 128 chr10 35156078 35156201 -105160564 - L1MC4a LINE L1 -2009 5799 5673 295 293 20 0 chr10 35156799 35156919 -105159846 - HERVL LTR ERVL -2364 3400 948 369 260 19 10 chr10 35157475 35157579 -105159186 - HERVL LTR ERVL -3035 2619 2515 651 200 78 106 chr10 35158926 35159286 -105157479 - L1MC4a LINE L1 -1786 6022 5673 2175 123 0 0 chr10 35160269 35160561 -105156204 - AluSx SINE Alu -20 292 1 597 242 20 90 chr10 35163201 35163445 -105153320 - MER76 LTR ERV -54 634 408 418 218 108 137 chr10 35163715 35164126 -105152639 - L1MC4a LINE L1 -1624 6184 5790 5218 149 22 38 chr10 35164126 35165005 -105151760 + MER6 DNA MER2_type 1 865 0 418 218 108 137 chr10 35165005 35165120 -105151645 - L1MC4a LINE L1 -2018 5790 5673 311 313 18 0 chr10 35166227 35166339 -105150426 - HERVL LTR ERVL -3019 2635 2522 1917 114 34 17 chr10 35167437 35167735 -105149030 - MER1A DNA MER1_type 0 529 227 11992 122 11 19 chr10 35167737 35169585 -105147180 + L1PA5 LINE L1 11 1842 -4304 * 42572 56 8 1 chr10 35169580 35175683 -105141082 - L1PA4 LINE L1 -1 6154 5 27846 64 1 0 chr10 35175681 35180006 -105136759 + L1PA5 LINE L1 1825 6152 -2 * 1540 171 4 0 chr10 35180034 35180268 -105136497 - MER1A DNA MER1_type -290 237 3 715 268 24 24 chr10 35181337 35181542 -105135223 - MER76 LTR ERV -33 655 451 232 152 0 0 chr10 35181647 35181693 -105135072 + LTR66 LTR ERVL 394 439 -171 419 254 17 8 chr10 35181734 35181852 -105134913 - L1MC/D LINE L1 -2017 5791 5673 14086 136 20 114 chr10 35184632 35187807 -105128958 + L1P LINE L1 9 2887 -3259 7535 110 5 7 chr10 35187907 35188949 -105127816 - HERVL-A2 LTR ERVL -4614 1040 1 2181 161 51 33 chr10 35188949 35189480 -105127285 - MLT2A2 LTR ERVL 0 554 1 2061 225 41 69 chr10 35189484 35189581 -105127184 - L1 LINE L1 -3354 2792 2694 242 83 83 0 chr10 35189581 35189617 -105127148 - U2 snRNA snRNA -149 39 1 2061 225 41 69 chr10 35189617 35190241 -105126524 - L1 LINE L1 -3452 2694 2054 230 35 0 0 chr10 35190300 35190329 -105126436 + MSTB LTR MaLR 1 29 -397 282 116 0 0 chr10 35190340 35190383 -105126382 + L1MB8 LINE L1 6105 6147 -31 220 349 0 0 chr10 35191167 35191230 -105125535 + MIR SINE MIR 63 125 -83 198 0 0 0 chr10 35191347 35191369 -105125396 + (CA)n Simple_repeat Simple_repeat 2 23 0 2425 226 12 23 chr10 35192060 35192217 -105124548 + L1M4b LINE L1 1083 1240 -5615 1884 172 159 8 chr10 35192217 35192589 -105124176 - MSTA LTR MaLR 0 428 1 2425 226 12 23 chr10 35192589 35193088 -105123677 + L1M4b LINE L1 1240 1729 -5126 1321 271 73 28 chr10 35193091 35193597 -105123168 + L1M4b LINE L1 1838 2366 -4593 4768 188 108 85 chr10 35193825 35194228 -105122537 + L1P2 LINE L1 1 393 -6463 993 132 0 0 chr10 35194228 35194364 -105122401 - AluSp SINE Alu -94 219 84 4768 188 108 85 chr10 35194364 35195315 -105121450 + L1P2 LINE L1 393 1321 -5535 596 213 8 25 chr10 35195315 35195437 -105121328 + FLAM_C SINE Alu 6 125 -18 4768 188 108 85 chr10 35195437 35197766 -105118999 + L1P2 LINE L1 1321 6500 -356 19454 78 3 7 chr10 35197914 35201624 -105115141 + HERVL LTR ERVL 1127 4826 -828 23 0 0 0 chr10 35201624 35201647 -105115118 + AT_rich Low_complexity Low_complexity 1 23 0 2359 114 17 3 chr10 35201652 35202012 -105114753 - L1PB1 LINE L1 -2 6149 5785 189 147 0 0 chr10 35202012 35202046 -105114719 + (TA)n Simple_repeat Simple_repeat 1 34 0 287 103 0 35 chr10 35202078 35202136 -105114629 + L1MC4 LINE L1 6648 6703 -1339 231 216 0 0 chr10 35202108 35202159 -105114606 - L1MC4 LINE L1 -1339 6703 6653 * 873 78 39 8 chr10 35202156 35202284 -105114481 - L1P5 LINE L1 -361 5790 5659 22 0 0 0 chr10 35202396 35202418 -105114347 + AT_rich Low_complexity Low_complexity 1 22 0 308 340 90 19 chr10 35202756 35202912 -105113853 + MLT2E LTR ERVL 37 203 -425 934 188 6 11 chr10 35202992 35203168 -105113597 + L1M3f LINE L1 5 179 -5149 4047 168 62 62 chr10 35203169 35204262 -105112503 + L1M3f LINE L1 339 1428 -4065 404 296 0 10 chr10 35204290 35204388 -105112377 + L1PA13 LINE L1 127 223 -6564 4418 142 82 20 chr10 35204477 35205364 -105111401 + L1PA16 LINE L1 5234 6166 0 1316 251 37 7 chr10 35205342 35205749 -105111016 + L1M3f LINE L1 2759 3177 -3151 * 4173 254 62 20 chr10 35206436 35206705 -105110060 - L1M1 LINE L1 -3936 3231 2975 2129 113 3 0 chr10 35206705 35206987 -105109778 - AluSx SINE Alu -29 283 1 4173 254 62 20 chr10 35206987 35209027 -105107738 - L1M1 LINE L1 -4192 2975 1133 2561 265 34 17 chr10 35209034 35209682 -105107083 + MLT-int LTR MaLR 841 1499 -236 959 206 48 31 chr10 35209682 35209910 -105106855 - MSTD LTR MaLR -164 232 1 4275 250 47 91 chr10 35209910 35212405 -105104360 - L1M3c LINE L1 -4660 2377 1 2044 214 77 53 chr10 35212417 35212927 -105103838 - L1M4c LINE L1 -4831 1711 1182 2043 148 7 3 chr10 35212927 35213232 -105103533 - AluSx SINE Alu -6 306 1 2044 214 77 53 chr10 35213232 35213595 -105103170 - L1M4c LINE L1 -5360 1182 829 895 160 75 0 chr10 35213750 35213938 -105102827 + L1PA13 LINE L1 1978 2179 -4608 230 291 163 26 chr10 35214115 35214538 -105102227 - L1M4 LINE L1 -3026 3120 2640 277 125 0 36 chr10 35214686 35214742 -105102023 - Alu SINE Alu 0 302 249 225 36 0 0 chr10 35214880 35214908 -105101857 + Alu SINE Alu 262 289 -12 2454 95 3 0 chr10 35214919 35215282 -105101483 + L1PA10 LINE L1 5812 6175 0 6955 222 34 31 chr10 35215321 35216962 -105099803 - L1MB4 LINE L1 -1 6677 5030 2182 123 10 0 chr10 35216962 35217271 -105099494 + AluSx SINE Alu 1 312 0 6955 222 34 31 chr10 35217271 35218593 -105098172 - L1MB4 LINE L1 -1648 5030 3713 2118 206 171 18 chr10 35218589 35219241 -105097524 - L1MB4 LINE L1 -3897 2749 1986 * 1919 120 14 3 chr10 35219241 35219532 -105097233 - AluSc SINE Alu -15 294 1 2118 206 171 18 chr10 35219532 35219564 -105097201 - L1MB4 LINE L1 -4660 1986 1960 252 367 0 7 chr10 35219666 35219813 -105096952 - L1MB4 LINE L1 -6383 159 14 4788 140 41 26 chr10 35220567 35221622 -105095143 + L1PA16 LINE L1 4408 5503 -663 2221 96 0 24 chr10 35221622 35221915 -105094850 - AluSx SINE Alu -26 286 1 4788 140 41 26 chr10 35221915 35222590 -105094175 + L1PA16 LINE L1 5503 6166 0 500 339 32 5 chr10 35222785 35223003 -105093762 - MIR SINE MIR -27 235 12 4277 16 0 0 chr10 35223198 35223687 -105093078 - L1PA2 LINE L1 -3 6152 5664 655 317 46 58 chr10 35224784 35225266 -105091499 + L1M3b LINE L1 1 476 -5805 21 36 0 0 chr10 35225434 35225462 -105091303 + AT_rich Low_complexity Low_complexity 1 28 0 1790 245 62 19 chr10 35225668 35226495 -105090270 + L1M3b LINE L1 1094 1943 -4408 3120 290 44 43 chr10 35226495 35227928 -105088837 + L1PBa LINE L1 67 1500 -5363 * 9466 213 43 18 chr10 35227926 35229401 -105087364 + L1PBa LINE L1 2427 3957 -2905 4908 51 2 0 chr10 35229401 35230008 -105086757 + L1PA7 LINE L1 5546 6153 -1 9466 213 43 18 chr10 35230008 35231291 -105085474 + L1PBa LINE L1 3957 5206 -1656 2239 172 59 13 chr10 35231387 35231864 -105084901 - L1M1 LINE L1 -5082 2483 1985 625 152 8 40 chr10 35231859 35231984 -105084781 - L1M1 LINE L1 -7429 136 16 * 916 207 10 35 chr10 35232256 35232459 -105084306 + MSTB LTR MaLR 1 198 -228 928 185 23 12 chr10 35232464 35232637 -105084128 + L1M1 LINE L1 22 196 -7369 13938 204 42 8 chr10 35232637 35235396 -105081369 - ERVL LTR ERVL -2150 3614 763 4551 198 45 25 chr10 35235411 35237098 -105079667 - L1MA7 LINE L1 -25 6852 5134 824 273 92 32 chr10 35237109 35237394 -105079371 - L1MA7 LINE L1 -5254 1399 583 337 304 70 23 chr10 35237441 35237612 -105079153 - L1M3d LINE L1 -5712 179 1 1877 258 20 30 chr10 35237625 35238122 -105078643 - ERVL LTR ERVL -5076 688 197 40097 68 8 2 chr10 35238922 35245032 -105071733 - L1PA4 LINE L1 -3 6152 1 228 271 86 7 chr10 35245243 35245383 -105071382 - L1M4 LINE L1 -1607 4539 4389 334 287 127 53 chr10 35246101 35246251 -105070514 + MIR SINE MIR 26 186 -76 21 71 0 0 chr10 35246943 35246985 -105069780 + AT_rich Low_complexity Low_complexity 1 42 0 1829 355 72 27 chr10 35247124 35248662 -105068103 + ERVL LTR ERVL 3725 5379 -385 1155 308 65 22 chr10 35248915 35249408 -105067357 + LTR33 LTR ERVL 8 521 0 21 71 0 0 chr10 35249536 35249578 -105067187 + AT_rich Low_complexity Low_complexity 1 42 0 435 139 0 25 chr10 35249599 35249678 -105067087 - MER116 DNA Mariner 0 80 4 4341 203 48 9 chr10 35250372 35251258 -105065507 + L1MC1 LINE L1 5 925 -5501 233 200 0 0 chr10 35251259 35251299 -105065466 + L1MC1 LINE L1 4564 4603 -1823 5793 102 24 6 chr10 35251309 35252525 -105064240 - L1PA15 LINE L1 -4 6161 4926 547 223 52 74 chr10 35252531 35252760 -105064005 - L1PA13 LINE L1 -5334 1453 1230 2803 286 52 19 chr10 35252770 35253619 -105063146 - L1PA13 LINE L1 -5910 877 1 1192 261 37 0 chr10 35253630 35253982 -105062783 + L1MC1 LINE L1 4595 4959 -1467 2073 208 39 2 chr10 35253990 35254399 -105062366 + MSTB1 LTR MaLR 9 432 0 2588 202 22 9 chr10 35254444 35255290 -105061475 + L1MC1 LINE L1 5018 5872 -745 4941 35 2 3 chr10 35255524 35256117 -105060648 - L1PA5 LINE L1 0 6154 5563 2552 46 0 0 chr10 35256117 35256444 -105060321 + L1P LINE L1 4999 5325 -821 1539 168 16 19 chr10 35256441 35256751 -105060014 + L1MC1 LINE L1 5861 6169 -444 * 994 212 151 55 chr10 35256751 35257076 -105059689 + MLT1A1 LTR MaLR 9 364 -1 2283 146 28 21 chr10 35257077 35257509 -105059256 + L1MC1 LINE L1 6179 6613 0 823 270 103 20 chr10 35257515 35257986 -105058779 + L1MEc LINE L1 2200 2700 -3515 1291 178 12 45 chr10 35258024 35258271 -105058494 - MER8 DNA MER2_type 0 239 1 1288 182 12 45 chr10 35259058 35259305 -105057460 + MER8 DNA MER2_type 1 239 0 492 248 25 31 chr10 35259358 35259519 -105057246 + L1MCa LINE L1 455 614 -5812 3713 252 67 50 chr10 35259525 35260904 -105055861 + L1MC/D LINE L1 500 1855 -4709 1710 196 7 0 chr10 35260904 35261200 -105055565 + AluJb SINE Alu 3 300 -12 3713 252 67 50 chr10 35261200 35262488 -105054277 + L1MC/D LINE L1 1855 3232 -3332 * 4733 204 86 44 chr10 35262487 35263231 -105053534 + L1MC/D LINE L1 4065 4776 -1986 1833 31 0 9 chr10 35263231 35263457 -105053308 + L1PA3 LINE L1 5929 6152 -3 4733 204 86 44 chr10 35263457 35264666 -105052099 + L1MC/D LINE L1 4776 6100 -662 289 250 60 12 chr10 35264686 35264770 -105051995 + MER119 DNA MER1_type 455 542 -41 228 305 62 45 chr10 35264812 35264895 -105051870 + L1MCa LINE L1 2577 2657 -3769 1979 123 0 10 chr10 35264895 35265235 -105051530 - AluSx SINE Alu 0 337 1 5259 87 7 17 chr10 35265241 35265992 -105050773 - L1PA14 LINE L1 0 6161 5419 228 305 62 45 chr10 35265992 35266256 -105050509 + L1MCa LINE L1 2661 2939 -3487 278 279 79 38 chr10 35266767 35267032 -105049733 + L1MEc LINE L1 2183 2458 -3938 443 171 94 21 chr10 35267055 35267182 -105049583 + L1MC1 LINE L1 6209 6333 0 361 280 52 10 chr10 35267189 35267382 -105049383 + L1MEc LINE L1 2468 2668 -3547 815 120 16 0 chr10 35267779 35267904 -105048861 - AluSg/x SINE Alu -12 300 174 995 104 0 0 chr10 35268004 35268139 -105048626 - AluY SINE Alu -176 135 1 566 271 162 29 chr10 35268488 35268939 -105047826 + L1M4 LINE L1 2117 2627 -3519 36 40 0 0 chr10 35269002 35269052 -105047713 + AT_rich Low_complexity Low_complexity 1 50 0 30 103 0 0 chr10 35269326 35269433 -105047332 + AT_rich Low_complexity Low_complexity 1 107 0 1623 138 15 0 chr10 35269656 35269917 -105046848 + L1PA11 LINE L1 5899 6163 -11 350 284 44 64 chr10 35269920 35270328 -105046437 + L1MEc LINE L1 2270 2669 -3546 25 51 0 0 chr10 35270409 35270448 -105046317 + AT_rich Low_complexity Low_complexity 1 39 0 255 243 27 0 chr10 35271444 35271518 -105045247 + L1MEc LINE L1 3450 3525 -2690 * 749 170 7 20 chr10 35271508 35271661 -105045104 + L1MA4A LINE L1 6019 6169 -134 * 2340 203 33 2 chr10 35271654 35272172 -105044593 + L1MEc LINE L1 3586 4119 -2096 634 160 28 35 chr10 35272146 35272290 -105044475 + L1MA4A LINE L1 6230 6372 0 * 303 338 42 63 chr10 35272290 35272577 -105044188 + L1MEc LINE L1 1741 2021 -4375 267 31 0 0 chr10 35273138 35273170 -105043595 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2306 100 0 6 chr10 35273995 35274306 -105042459 - AluSc SINE Alu 0 309 1 1910 213 32 74 chr10 35274898 35275572 -105041193 + L1M4b LINE L1 1083 1727 -5128 741 258 45 42 chr10 35275577 35275910 -105040855 + L1M4b LINE L1 1838 2171 -4788 25229 61 11 1 chr10 35275912 35279166 -105037599 + L1P LINE L1 4 3291 -2855 22 0 0 0 chr10 35280053 35280075 -105036690 + AT_rich Low_complexity Low_complexity 1 22 0 309 295 38 9 chr10 35280517 35280622 -105036143 + L1MC4a LINE L1 5682 5789 -2019 556 291 51 54 chr10 35280682 35281016 -105035749 + L1MC4a LINE L1 5816 6150 -1658 2160 170 70 2 chr10 35281016 35281415 -105035350 + MSTB LTR MaLR 1 426 0 556 291 51 54 chr10 35281415 35281472 -105035293 + L1MC4a LINE L1 6150 6206 -1602 301 341 71 9 chr10 35281580 35281903 -105034862 + L1MC4 LINE L1 6360 6702 -1340 1717 283 62 28 chr10 35281920 35282563 -105034202 + MER76 LTR ERV 1 665 -23 2153 166 91 2 chr10 35284138 35284554 -105032211 + MLT1C LTR MaLR 2 454 -13 1270 169 5 5 chr10 35384779 35384998 -104931767 + AluJo SINE Alu 93 311 -1 304 344 16 60 chr10 35386205 35386455 -104930310 - L1ME LINE L1 -529 5637 5399 2504 68 0 0 chr10 35386677 35386986 -104929779 + AluSc SINE Alu 1 309 0 934 254 150 48 chr10 35387012 35387585 -104929180 - LTR50 LTR ERVL -91 704 1 276 291 0 0 chr10 35387843 35387929 -104928836 - MLT-int LTR MaLR -21 1714 1629 405 0 0 0 chr10 35388029 35388074 -104928691 + (CA)n Simple_repeat Simple_repeat 2 46 0 1798 238 92 21 chr10 35388332 35388992 -104927773 - L1 LINE L1 -2994 3152 2446 757 110 76 0 chr10 35389738 35389856 -104926909 - AluSg/x SINE Alu -13 299 173 21 0 0 0 chr10 35390609 35390630 -104926135 + AT_rich Low_complexity Low_complexity 1 21 0 1560 165 29 0 chr10 35391138 35391417 -104925348 - L1PA16 LINE L1 -6 6160 5874 517 292 39 35 chr10 35391988 35392248 -104924517 - L1MC4a LINE L1 -1972 5836 5576 456 167 0 108 chr10 35392331 35392451 -104924314 + L1M4 LINE L1 4521 4627 -1519 3757 103 2 0 chr10 35392494 35392988 -104923777 - MER1A DNA MER1_type 0 529 35 2513 225 42 3 chr10 35393010 35393655 -104923110 + L1M4 LINE L1 4663 5332 -814 2339 269 59 8 chr10 35393655 35394396 -104922369 + L1M3 LINE L1 934 1712 -5456 299 275 28 18 chr10 35394399 35394508 -104922257 + L1M3 LINE L1 1823 1932 -5236 7832 205 37 42 chr10 35394548 35395969 -104920796 + L1M3 LINE L1 3673 5082 -2085 22014 83 15 0 chr10 35395969 35399825 -104916940 + L1PA7 LINE L1 2282 6154 0 7832 205 37 42 chr10 35399825 35400591 -104916174 + L1M3 LINE L1 5082 5850 -1317 1221 221 0 0 chr10 35400612 35400834 -104915931 - AluJo SINE Alu -17 295 74 2194 182 58 66 chr10 35400853 35401141 -104915624 + L1M3 LINE L1 5868 6157 -1047 234 0 0 0 chr10 35401141 35401167 -104915598 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 2194 182 58 66 chr10 35401167 35401566 -104915199 + L1M3 LINE L1 6157 6550 -654 180 152 0 0 chr10 35401737 35401770 -104914995 + (TA)n Simple_repeat Simple_repeat 2 34 0 22 0 0 0 chr10 35401812 35401834 -104914931 + AT_rich Low_complexity Low_complexity 1 22 0 901 237 113 35 chr10 35402182 35402657 -104914108 + L1ME2 LINE L1 4946 5482 -682 270 0 0 0 chr10 35402657 35402687 -104914078 + (CA)n Simple_repeat Simple_repeat 2 31 0 901 237 113 35 chr10 35402687 35402809 -104913956 + L1ME2 LINE L1 5482 5593 -571 399 257 22 11 chr10 35402835 35402976 -104913789 + L1ME2 LINE L1 5999 6145 -17 1261 284 57 15 chr10 35402990 35403391 -104913374 + L1MC4a LINE L1 6348 6765 -1043 829 241 95 7 chr10 35403390 35403685 -104913080 + L1M4 LINE L1 5005 5325 -821 * 1720 241 113 28 chr10 35403779 35403859 -104912906 + L1MC4 LINE L1 6995 7067 -975 224 304 25 13 chr10 35403859 35403938 -104912827 + GA-rich Low_complexity Low_complexity 3 82 0 1720 241 113 28 chr10 35403938 35404619 -104912146 + L1MC4 LINE L1 7067 7914 -128 226 276 102 0 chr10 35404818 35404916 -104911849 + L1M LINE L1 5261 5368 -2440 25 31 0 0 chr10 35404974 35405006 -104911759 + AT_rich Low_complexity Low_complexity 1 32 0 3411 150 28 5 chr10 35405006 35405618 -104911147 - L1MB3 LINE L1 -7 6176 5551 671 207 133 7 chr10 35405619 35405769 -104910996 - L1MCa LINE L1 -6228 198 30 331 164 0 0 chr10 35405773 35405834 -104910931 - L1MB8 LINE L1 -304 5874 5814 * 33257 37 18 8 chr10 35405828 35410827 -104905938 - L1PA4 LINE L1 -1 6154 1113 1701 199 6 3 chr10 35410853 35411189 -104905576 - L1MB8 LINE L1 -399 5785 5449 192 229 0 0 chr10 35411385 35411468 -104905297 + (TA)n Simple_repeat Simple_repeat 1 83 0 32 26 0 0 chr10 35411468 35411507 -104905258 + AT_rich Low_complexity Low_complexity 1 39 0 2568 95 5 19 chr10 35411538 35411916 -104904849 - L1PB3 LINE L1 0 6154 5782 358 220 14 35 chr10 35411916 35412057 -104904708 + (CATA)n Simple_repeat Simple_repeat 3 140 0 1545 203 14 3 chr10 35412089 35412438 -104904327 - L1MB8 LINE L1 -1034 5112 4760 * 2332 148 3 0 chr10 35412424 35412810 -104903955 - L1P LINE L1 -1028 5118 4732 246 260 127 27 chr10 35412800 35412950 -104903815 - L1MC/D LINE L1 -1943 5865 5701 * 913 200 17 6 chr10 35413215 35413395 -104903370 + MER5A DNA MER1_type 7 188 -1 308 243 19 39 chr10 35414993 35415096 -104901669 + MER5B DNA MER1_type 1 101 -77 244 200 0 0 chr10 35415090 35415130 -104901635 - MER5B DNA MER1_type -135 43 4 * 740 290 5 0 chr10 35415334 35415541 -104901224 + MER3 DNA MER1_type 1 208 -1 667 82 31 0 chr10 35416311 35416408 -104900357 - L1PA10 LINE L1 -3 6165 6066 21 82 0 0 chr10 35416426 35416475 -104900290 + AT_rich Low_complexity Low_complexity 1 49 0 5872 94 26 0 chr10 35416909 35418186 -104898579 - L1PA10 LINE L1 -107 6061 4757 21 0 0 0 chr10 35418585 35418606 -104898159 + AT_rich Low_complexity Low_complexity 1 21 0 229 360 10 10 chr10 35419185 35419285 -104897480 - MIR SINE MIR -160 102 3 1881 167 147 5 chr10 35419324 35419732 -104897033 - MER31B LTR ERV1 0 466 1 24 0 0 0 chr10 35419904 35419928 -104896837 + AT_rich Low_complexity Low_complexity 1 24 0 413 311 95 26 chr10 35421220 35421410 -104895355 - L3 LINE CR1 -49 1528 1326 665 311 4 13 chr10 35421764 35421992 -104894773 + L1MC3 LINE L1 6304 6529 -1256 264 228 0 0 chr10 35421985 35422042 -104894723 + L1MD3 LINE L1 7908 7964 -31 * 709 227 47 72 chr10 35423416 35423885 -104892880 + L1M4 LINE L1 7 1472 -4831 1118 95 71 0 chr10 35423885 35424054 -104892711 + L1PA14 LINE L1 5981 6161 0 2299 101 3 3 chr10 35424063 35424369 -104892396 + AluSx SINE Alu 3 308 -4 311 357 45 28 chr10 35425809 35426095 -104890670 - L1ME1 LINE L1 0 6166 5876 701 228 170 4 chr10 35427425 35427684 -104889081 + L1M4 LINE L1 4880 5181 -1201 1460 162 0 37 chr10 35427723 35427994 -104888771 - MLT1A1 LTR MaLR 0 365 105 609 246 0 0 chr10 35427998 35428124 -104888641 - HERVL74 LTR ERVL -2060 3625 3500 4366 218 90 21 chr10 35428146 35429603 -104887162 - HERVL74 LTR ERVL -2357 3328 1608 456 19 0 0 chr10 35429603 35429656 -104887109 + (TG)n Simple_repeat Simple_repeat 2 54 0 4366 218 90 21 chr10 35429656 35430209 -104886556 - HERVL74 LTR ERVL -4077 1608 1095 26 74 0 0 chr10 35430233 35430287 -104886478 + AT_rich Low_complexity Low_complexity 1 54 0 267 243 37 28 chr10 35430456 35430563 -104886202 - MER107 DNA MER1_type -22 175 68 1617 196 83 32 chr10 35431046 35431644 -104885121 - L1ME1 LINE L1 -325 5842 5188 3383 188 66 15 chr10 35431667 35431710 -104885055 - L1MB4 LINE L1 -65 6115 6076 3341 198 26 84 chr10 35431710 35432738 -104884027 + LTR5 LTR ERVK 1 969 0 3383 188 66 15 chr10 35432738 35433929 -104882836 - L1MB4 LINE L1 -104 6076 4834 618 234 137 26 chr10 35433968 35434194 -104882571 - L2 LINE L2 -1617 1697 1447 223 227 0 106 chr10 35434210 35434276 -104882489 - L2 LINE L2 0 3313 3255 514 152 235 0 chr10 35434279 35434411 -104882354 - L1ME LINE L1 -665 5499 5337 1890 189 52 14 chr10 35434436 35434891 -104881874 + L1MB4 LINE L1 5522 6004 -161 1501 195 81 0 chr10 35435683 35435990 -104880775 + L1PB4 LINE L1 5821 6152 -4 24 0 0 0 chr10 35438005 35438029 -104878736 + AT_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr10 35438661 35438698 -104878067 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 35439927 35439948 -104876817 + AT_rich Low_complexity Low_complexity 1 21 0 184 314 39 0 chr10 35440044 35440095 -104876670 - L2 LINE L2 -87 3185 3133 2259 112 0 13 chr10 35440327 35440640 -104876125 + AluSx SINE Alu 4 312 0 216 111 0 0 chr10 35441258 35441294 -104875471 + (A)n Simple_repeat Simple_repeat 1 36 0 282 139 0 0 chr10 35442234 35442277 -104874488 + MER116 DNA Mariner 9 51 -29 22 35 0 0 chr10 35442283 35442312 -104874453 + AT_rich Low_complexity Low_complexity 1 29 0 721 278 120 0 chr10 35442814 35443023 -104873742 + MIR SINE MIR 3 236 -26 215 189 19 0 chr10 35443299 35443352 -104873413 + (CATATA)n Simple_repeat Simple_repeat 1 54 0 1975 141 7 0 chr10 35443566 35443870 -104872895 + AluSx SINE Alu 5 310 -2 218 270 61 108 chr10 35443966 35444114 -104872651 - MIR3 SINE MIR -52 156 16 22 35 0 0 chr10 35444508 35444537 -104872228 + AT_rich Low_complexity Low_complexity 1 29 0 996 164 145 38 chr10 35444747 35444978 -104871787 - L1ME1 LINE L1 -5 6161 5897 1366 89 38 60 chr10 35444978 35445213 -104871552 + MER30 DNA MER1_type 1 230 0 996 164 145 38 chr10 35445213 35445243 -104871522 - L1ME1 LINE L1 -269 5897 5872 2675 235 78 24 chr10 35445887 35446847 -104869918 + L1ME LINE L1 4238 5249 -897 637 168 17 13 chr10 35446854 35446986 -104869779 + L1ME LINE L1 5564 5689 -477 182 309 73 0 chr10 35447172 35447227 -104869538 - MIR SINE MIR -10 252 194 1971 142 35 0 chr10 35448011 35448293 -104868472 - AluSx SINE Alu -20 292 1 39979 69 5 10 chr10 35449428 35455610 -104861155 + L1PA5 LINE L1 5 6153 -1 24 0 0 0 chr10 35455626 35455650 -104861115 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr10 35456667 35456690 -104860075 + AT_rich Low_complexity Low_complexity 1 23 0 1956 143 3 34 chr10 35457945 35458266 -104858499 + AluSx SINE Alu 1 311 -1 299 289 0 87 chr10 35461263 35461367 -104855398 + L2 LINE L2 3218 3312 -1 473 271 25 0 chr10 35462104 35462226 -104854539 - MIR SINE MIR -52 210 86 879 125 0 7 chr10 35463467 35463603 -104853162 + MLT1A1 LTR MaLR 1 135 -230 2064 166 57 15 chr10 35463606 35464009 -104852756 + MSTB LTR MaLR 1 420 -6 1131 191 31 0 chr10 35464014 35464239 -104852526 + MLT1A1 LTR MaLR 133 364 -1 2154 105 14 7 chr10 35464764 35465059 -104851706 + AluSq SINE Alu 1 297 -16 218 342 174 5 chr10 35465865 35465994 -104850771 - L2 LINE L2 -510 2804 2698 204 45 23 45 chr10 35465994 35466038 -104850727 + (TTA)n Simple_repeat Simple_repeat 3 45 0 218 342 174 5 chr10 35466038 35466092 -104850673 - L2 LINE L2 -616 2698 2590 202 290 161 47 chr10 35466201 35466394 -104850371 - L2 LINE L2 -1007 2307 2093 520 169 260 24 chr10 35469407 35469653 -104847112 - MER33 DNA MER1_type -32 292 1 2484 114 28 2 chr10 35470025 35470419 -104846346 - L1MA2 LINE L1 0 6304 5901 358 240 107 117 chr10 35470795 35471187 -104845578 - L1ME4a LINE L1 -4 6117 5730 494 297 108 55 chr10 35471293 35471430 -104845335 - L1ME4a LINE L1 -429 5692 5564 2056 148 36 0 chr10 35471430 35471760 -104845005 - MER2 DNA MER2_type 0 344 3 494 297 108 55 chr10 35471760 35472003 -104844762 - L1ME4a LINE L1 -557 5564 5292 268 215 129 11 chr10 35472576 35472669 -104844096 - L2 LINE L2 -509 2805 2702 196 266 94 86 chr10 35473259 35473387 -104843378 + L2 LINE L2 2706 2834 -480 1940 142 27 0 chr10 35473408 35473704 -104843061 + AluSx SINE Alu 2 305 -7 1433 74 0 0 chr10 35473815 35473991 -104842774 + AluSc SINE Alu 128 303 -6 238 219 53 79 chr10 35475666 35475780 -104840985 + L2 LINE L2 1731 1841 -1473 1418 199 48 12 chr10 35475786 35476123 -104840642 - Tigger3b DNA MER2_type -3 1228 880 441 54 0 0 chr10 35476125 35476181 -104840584 + (TGAG)n Simple_repeat Simple_repeat 1 56 0 2179 141 125 44 chr10 35476255 35476476 -104840289 - Tigger3b DNA MER2_type -2492 536 334 2271 98 0 3 chr10 35476476 35476773 -104839992 + AluSc SINE Alu 1 296 -13 2179 141 125 44 chr10 35476773 35477047 -104839718 - Tigger3b DNA MER2_type -2694 334 1 250 294 44 62 chr10 35477452 35477612 -104839153 - L2 LINE L2 -193 3079 2923 325 353 98 0 chr10 35478860 35478993 -104837772 + L2 LINE L2 3116 3261 -11 432 244 0 0 chr10 35478996 35479078 -104837687 + AluJo SINE Alu 14 95 -217 1098 144 0 30 chr10 35479096 35479263 -104837502 - AluJb SINE Alu -16 296 135 566 204 86 38 chr10 35479263 35479449 -104837316 + AluJo SINE Alu 104 298 -14 358 238 91 62 chr10 35480112 35480322 -104836443 - LTR16C LTR ERVL 0 491 276 2407 58 3 3 chr10 35481730 35482021 -104834744 + AluY SINE Alu 1 291 -20 2013 134 14 0 chr10 35483263 35483555 -104833210 - AluSx SINE Alu -16 296 1 203 365 26 9 chr10 35483714 35483829 -104832936 - L2 LINE L2 -2564 750 634 324 0 0 0 chr10 35483845 35483881 -104832884 + (TG)n Simple_repeat Simple_repeat 2 37 0 617 250 43 0 chr10 35484209 35484349 -104832416 + MIR SINE MIR 116 261 -1 1888 138 140 6 chr10 35484909 35485258 -104831507 + MSTD LTR MaLR 1 396 0 360 325 60 7 chr10 35485587 35485738 -104831027 - MIR SINE MIR -79 183 25 25 51 0 0 chr10 35486215 35486254 -104830511 + AT_rich Low_complexity Low_complexity 1 39 0 402 269 10 0 chr10 35490076 35490180 -104826585 - MIR SINE MIR -73 135 31 341 286 107 74 chr10 35490382 35490773 -104825992 + L2 LINE L2 2081 2484 -830 319 212 59 47 chr10 35490841 35491011 -104825754 - Charlie7 DNA MER1_type -1 2611 2440 236 283 0 0 chr10 35491129 35491182 -104825583 + (TATATG)n Simple_repeat Simple_repeat 5 57 0 25 0 0 0 chr10 35492807 35492832 -104823933 + AT_rich Low_complexity Low_complexity 1 25 0 1803 160 14 0 chr10 35492838 35493125 -104823640 + AluJb SINE Alu 1 291 -21 584 244 124 16 chr10 35493349 35493542 -104823223 + MIR SINE MIR 14 227 -35 307 274 84 11 chr10 35493582 35493677 -104823088 - MIR SINE MIR -108 154 53 311 232 133 88 chr10 35493901 35494082 -104822683 + L1M2 LINE L1 1159 1347 -5502 336 290 206 61 chr10 35494114 35494413 -104822352 + L1M2 LINE L1 370 625 -6224 258 81 0 0 chr10 35494413 35494450 -104822315 + (CCCCCG)n Simple_repeat Simple_repeat 1 37 0 336 290 206 61 chr10 35494450 35494802 -104821963 + L1M2 LINE L1 625 1115 -5734 205 254 0 30 chr10 35496267 35496334 -104820431 + L2 LINE L2 3208 3272 0 347 151 0 41 chr10 35497057 35497130 -104819635 - MER94 DNA DNA -64 70 1 1084 143 71 91 chr10 35497740 35497992 -104818773 + AluJo SINE Alu 42 288 -24 279 0 0 0 chr10 35498164 35498195 -104818570 + (T)n Simple_repeat Simple_repeat 1 31 0 22 0 0 0 chr10 35498839 35498861 -104817904 + AT_rich Low_complexity Low_complexity 1 22 0 1434 136 33 0 chr10 35500282 35500496 -104816269 - AluSq SINE Alu -10 303 83 2269 110 0 3 chr10 35500526 35500827 -104815938 + AluSx SINE Alu 1 300 -12 443 263 120 0 chr10 35500828 35500961 -104815804 - MIR SINE MIR -113 149 1 755 208 76 0 chr10 35501070 35501214 -104815551 + FRAM SINE Alu 2 156 -10 2305 118 0 0 chr10 35501219 35501524 -104815241 - AluSx SINE Alu -7 305 1 409 380 88 0 chr10 35501952 35502157 -104814608 + L2 LINE L2 2818 3040 -273 5014 174 51 28 chr10 35502173 35503271 -104813494 + L1MB2 LINE L1 4004 5075 -1096 2228 125 0 0 chr10 35503271 35503574 -104813191 - AluSq SINE Alu -10 303 1 5014 174 51 28 chr10 35503574 35503904 -104812861 + L1MB2 LINE L1 5075 5396 -775 195 42 0 0 chr10 35503904 35503928 -104812837 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5014 174 51 28 chr10 35503928 35504616 -104812149 + L1MB2 LINE L1 5396 6171 0 338 284 0 0 chr10 35504616 35504704 -104812061 + L1MC4a LINE L1 6611 6698 -1110 356 287 36 24 chr10 35505136 35505303 -104811462 + L1MC4 LINE L1 6893 7061 -981 2138 138 3 0 chr10 35505359 35505657 -104811108 + AluSx SINE Alu 1 299 -13 433 264 126 45 chr10 35505681 35506063 -104810702 + L1MC5 LINE L1 7507 7919 -42 2116 124 0 7 chr10 35506114 35506413 -104810352 + AluSx SINE Alu 1 297 -15 185 262 131 0 chr10 35507190 35507274 -104809491 + L3 LINE CR1 692 786 -791 392 229 180 49 chr10 35507989 35508172 -104808593 + MIR SINE MIR 2 208 -54 301 339 52 31 chr10 35508457 35508649 -104808116 + L3b LINE CR1 1120 1315 -268 240 302 81 0 chr10 35509517 35509603 -104807162 + L3b LINE CR1 1392 1484 -99 1772 164 20 3 chr10 35510133 35510431 -104806334 + AluJo SINE Alu 1 303 -9 2310 82 14 7 chr10 35510517 35510811 -104805954 + AluSp SINE Alu 1 296 -17 22 0 0 0 chr10 35511393 35511415 -104805350 + AT_rich Low_complexity Low_complexity 1 22 0 922 128 0 0 chr10 35511420 35511545 -104805220 - AluJb SINE Alu -187 125 1 2244 168 20 74 chr10 35511948 35512435 -104804330 + LOR1b LTR ERV1 1 461 0 2478 85 0 3 chr10 35512692 35512997 -104803768 - AluSx SINE Alu -8 304 1 276 264 118 0 chr10 35514002 35514040 -104802725 + MER5C DNA MER1_type 2 34 -290 617 152 0 80 chr10 35514040 35514139 -104802626 + L1PB1 LINE L1 6024 6111 -40 2241 115 3 0 chr10 35514139 35514443 -104802322 - AluSg SINE Alu -5 305 1 617 152 0 80 chr10 35514443 35514481 -104802284 + L1PB1 LINE L1 6111 6150 -1 276 264 118 0 chr10 35514481 35514552 -104802213 + MER5C DNA MER1_type 34 124 -200 296 215 0 0 chr10 35514562 35514627 -104802138 + MER5C DNA MER1_type 226 290 -34 213 151 0 75 chr10 35514666 35514719 -104802046 + MER5C DNA MER1_type 273 321 -3 387 0 0 0 chr10 35514996 35515039 -104801726 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 6362 49 1 4 chr10 35515040 35515773 -104800992 - L1PA6 LINE L1 -13 6141 5411 186 323 73 0 chr10 35515781 35515877 -104800888 - MIR SINE MIR -1 261 159 635 222 116 0 chr10 35516028 35516226 -104800539 + MIR SINE MIR 39 259 -3 2343 94 0 7 chr10 35516609 35516916 -104799849 + AluSx SINE Alu 1 305 -7 355 269 135 10 chr10 35516916 35517020 -104799745 + L2 LINE L2 3197 3313 0 1293 169 65 4 chr10 35517874 35518152 -104798613 - AluJo SINE Alu -17 295 1 266 200 0 0 chr10 35518213 35518258 -104798507 + L3 LINE CR1 1526 1570 -7 967 203 0 0 chr10 35518974 35519132 -104797633 - FRAM SINE Alu -8 158 1 250 319 0 0 chr10 35519133 35519202 -104797563 + L2 LINE L2 3245 3313 0 1759 124 0 12 chr10 35519252 35519502 -104797263 - AluSx SINE Alu -11 301 55 185 289 26 0 chr10 35519526 35519564 -104797201 + L2 LINE L2 3147 3185 -87 369 235 118 0 chr10 35519873 35520026 -104796739 + L1ME4a LINE L1 5713 5883 -238 440 247 114 55 chr10 35520032 35520303 -104796462 + MLT1L LTR MaLR 2 288 -327 247 248 57 67 chr10 35520757 35520862 -104795903 + MLT1L LTR MaLR 504 607 -8 342 167 8 108 chr10 35520926 35521046 -104795719 + L1ME4a LINE L1 6007 6114 -7 1956 135 7 3 chr10 35521057 35521346 -104795419 - AluSx SINE Alu -22 290 1 2143 107 10 3 chr10 35521613 35521912 -104794853 + AluSq SINE Alu 1 301 -12 223 261 87 33 chr10 35521945 35522037 -104794728 - MIR SINE MIR -54 208 112 413 207 12 0 chr10 35522179 35522261 -104794504 - MLT1K LTR MaLR -14 574 492 1047 258 9 0 chr10 35522843 35523056 -104793709 - MER58A DNA MER1_type -1 223 9 1785 161 20 7 chr10 35523356 35523660 -104793105 + AluJb SINE Alu 1 308 -4 1884 126 13 31 chr10 35524456 35524773 -104791992 - AluJb SINE Alu -1 311 1 207 0 0 0 chr10 35525234 35525257 -104791508 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 1147 195 26 4 chr10 35525394 35525620 -104791145 - L1MB3 LINE L1 0 6183 5953 2502 142 10 116 chr10 35525738 35525895 -104790870 - L1MB3 LINE L1 -210 5973 5801 2216 120 0 0 chr10 35525895 35526195 -104790570 - AluSx SINE Alu -12 300 1 2502 142 10 116 chr10 35526195 35526454 -104790311 - L1MB3 LINE L1 -382 5801 5634 1972 158 0 0 chr10 35526454 35526765 -104790000 - AluSx SINE Alu -1 311 1 2502 142 10 116 chr10 35526765 35526933 -104789832 - L1MB3 LINE L1 -549 5634 5450 523 115 26 0 chr10 35528018 35528096 -104788669 - L1MC1 LINE L1 0 6333 6254 2358 155 86 41 chr10 35528101 35528297 -104788468 - L1MC3 LINE L1 -661 5683 5497 2125 134 0 0 chr10 35528297 35528589 -104788176 - AluSx SINE Alu -20 292 1 2358 155 86 41 chr10 35528589 35528984 -104787781 - L1MC3 LINE L1 -847 5497 5302 2700 92 3 72 chr10 35528984 35529373 -104787392 - THE1B LTR MaLR -2 362 1 2358 155 86 41 chr10 35529373 35529516 -104787249 - L1MC3 LINE L1 -1042 5302 5167 1822 164 29 0 chr10 35529820 35530121 -104786644 + AluSx SINE Alu 1 309 0 1603 169 14 14 chr10 35530147 35530442 -104786323 + L1MC2 LINE L1 6041 6335 -9 2183 105 14 0 chr10 35530656 35530942 -104785823 - AluSg SINE Alu -20 290 1 4783 81 24 5 chr10 35531177 35531805 -104784960 - L1PA13 LINE L1 0 6163 5524 327 259 68 68 chr10 35531805 35531952 -104784813 + MLT1E1 LTR MaLR 4 150 -504 1324 188 84 82 chr10 35532013 35532380 -104784385 + MLT1E1 LTR MaLR 287 654 0 268 298 47 35 chr10 35533090 35533261 -104783504 + HAL1 LINE L1 1179 1351 -1156 306 157 0 0 chr10 35533298 35533349 -104783416 - LTR40b LTR ERVL 0 462 412 2136 108 17 0 chr10 35533750 35534038 -104782727 + AluSg SINE Alu 1 293 -17 327 49 0 0 chr10 35534038 35534079 -104782686 + (TA)n Simple_repeat Simple_repeat 2 42 0 1616 188 10 16 chr10 35534210 35534519 -104782246 + AluJb SINE Alu 1 307 -5 1209 167 12 124 chr10 35534693 35535023 -104781742 - MLT1A1 LTR MaLR 0 365 73 2205 125 0 0 chr10 35535044 35535348 -104781417 - AluSp SINE Alu -9 304 1 1810 158 0 7 chr10 35535354 35535638 -104781127 - L1PA16 LINE L1 -11 6155 5874 9559 182 29 9 chr10 35535638 35537983 -104778782 - L1PA16 LINE L1 -508 5658 3268 1623 272 35 2 chr10 35537984 35538503 -104778262 + L1PA16 LINE L1 2725 3260 -2886 378 165 25 25 chr10 35538503 35538582 -104778183 - MLT1A1 LTR MaLR -344 84 6 384 275 116 51 chr10 35538993 35539269 -104777496 + L1MC4a LINE L1 5613 5906 -1902 744 155 16 16 chr10 35539315 35539444 -104777321 + FLAM_C SINE Alu 2 130 -3 227 270 90 18 chr10 35539469 35539580 -104777185 + L1ME4a LINE L1 5978 6096 -25 2583 113 5 24 chr10 35539619 35539990 -104776775 - THE1B LTR MaLR 0 364 1 3509 167 16 18 chr10 35539992 35540598 -104776167 + MER6A DNA MER2_type 1 605 0 2106 112 3 14 chr10 35541296 35541610 -104775155 - AluSq SINE Alu 0 313 1 1353 124 9 40 chr10 35541612 35541837 -104774928 - AluJo SINE Alu -17 295 78 253 174 158 0 chr10 35542753 35542825 -104773940 - MIR SINE MIR -77 131 49 2077 136 0 0 chr10 35543234 35543536 -104773229 + AluSx SINE Alu 1 302 -10 2175 118 3 0 chr10 35543844 35544140 -104772625 - AluSx SINE Alu -15 297 1 1687 148 7 40 chr10 35544304 35544439 -104772326 + AluJb SINE Alu 1 139 -173 2094 86 3 46 chr10 35544439 35544922 -104771843 + AluSq SINE Alu 1 470 0 1124 6 22 50 chr10 35544742 35544965 -104771800 + (TAAAA)n Simple_repeat Simple_repeat 3 220 0 1687 148 7 40 chr10 35544922 35545124 -104771641 + AluJb SINE Alu 139 288 -24 23 68 0 0 chr10 35545256 35545300 -104771465 + AT_rich Low_complexity Low_complexity 1 44 0 183 295 158 21 chr10 35546752 35546847 -104769918 - MIR SINE MIR -108 154 47 1751 155 3 3 chr10 35547700 35547984 -104768781 - AluJo SINE Alu -8 304 21 6040 78 24 63 chr10 35548067 35549017 -104767748 + L1PA11 LINE L1 5266 6174 0 2298 97 0 7 chr10 35549431 35549729 -104767036 + AluSg SINE Alu 1 296 -14 5282 128 63 73 chr10 35549842 35550969 -104765796 + pTR5 LTR ERV1 742 2029 -409 300 152 58 68 chr10 35550969 35551072 -104765693 + LTR30 LTR ERV1 377 475 -94 1134 151 59 0 chr10 35551072 35551258 -104765507 + LTR12 LTR ERV1 385 581 -133 1564 190 3 40 chr10 35551307 35551586 -104765179 + AluJo SINE Alu 1 270 -32 2203 108 0 0 chr10 35551586 35551881 -104764884 - AluSq SINE Alu -18 295 1 1564 190 3 40 chr10 35551881 35551901 -104764864 + AluJo SINE Alu 270 289 -13 2289 143 33 6 chr10 35553179 35553544 -104763221 - THE1C LTR MaLR 0 375 1 779 238 38 0 chr10 35553888 35554073 -104762692 - L1MC/D LINE L1 -1986 5822 5631 26 0 0 0 chr10 35554364 35554390 -104762375 + AT_rich Low_complexity Low_complexity 1 26 0 317 219 21 42 chr10 35554522 35554618 -104762147 - HAL1b LINE L1 -989 359 266 256 108 0 0 chr10 35554942 35554979 -104761786 + MSTA LTR MaLR 247 283 -145 862 141 8 0 chr10 35555413 35555534 -104761231 + FLAM_C SINE Alu 2 123 -10 21 0 0 0 chr10 35555534 35555555 -104761210 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr10 35556520 35556549 -104760216 + AT_rich Low_complexity Low_complexity 1 29 0 4660 45 2 2 chr10 35556556 35557117 -104759648 - L1PA8 LINE L1 -4 6168 5608 5406 43 1 1 chr10 35556559 35557206 -104759559 - L1PA8 LINE L1 -7 6165 5519 225 299 0 0 chr10 35557646 35557723 -104759042 - MLT1I LTR MaLR -229 180 104 1046 140 7 0 chr10 35557816 35557966 -104758799 + AluSq/x SINE Alu 1 151 -162 529 240 12 8 chr10 35557968 35558093 -104758672 + L1PB4 LINE L1 6030 6151 0 441 244 64 58 chr10 35558277 35558341 -104758424 - MIR SINE MIR -73 189 127 2430 98 0 0 chr10 35558341 35558648 -104758117 + AluSx SINE Alu 1 307 -5 441 244 64 58 chr10 35558648 35558739 -104758026 - MIR SINE MIR -135 127 33 747 151 8 8 chr10 35559971 35560090 -104756675 + FLAM_C SINE Alu 9 127 -16 180 0 0 0 chr10 35560091 35560111 -104756654 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 202 146 0 24 chr10 35560399 35560440 -104756325 + (TTTAA)n Simple_repeat Simple_repeat 4 43 0 1894 148 26 7 chr10 35561033 35561464 -104755301 - AluSx SINE Alu 0 437 1 490 216 29 22 chr10 35561607 35561746 -104755019 - MLT1J2 LTR MaLR -290 160 21 339 285 33 117 chr10 35561833 35562204 -104754561 + L2 LINE L2 2746 3089 -183 324 265 20 41 chr10 35562324 35562422 -104754343 - MLT1J2 LTR MaLR -18 432 337 488 377 0 0 chr10 35564141 35564295 -104752470 + MIR3 SINE MIR 44 197 -11 1267 61 0 11 chr10 35564925 35565105 -104751660 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 2176 99 0 14 chr10 35565105 35565389 -104751376 - AluSq SINE Alu -33 280 1 531 220 75 61 chr10 35565598 35565839 -104750926 - LTR1B LTR ERV1 -383 443 149 1673 176 19 38 chr10 35566060 35566373 -104750392 - AluJo SINE Alu -1 311 5 1961 162 0 13 chr10 35566427 35566736 -104750029 - AluJb SINE Alu -7 305 1 189 0 0 0 chr10 35567150 35567171 -104749594 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1925 141 0 7 chr10 35567506 35567790 -104748975 - AluJo SINE Alu -30 282 1 315 273 126 22 chr10 35568178 35568361 -104748404 - MIR SINE MIR -17 245 44 1835 166 0 10 chr10 35568688 35568990 -104747775 - AluJb SINE Alu -13 299 1 22 35 0 0 chr10 35570613 35570642 -104746123 + AT_rich Low_complexity Low_complexity 1 29 0 1819 131 0 0 chr10 35570643 35570902 -104745863 + AluSx SINE Alu 47 305 -7 21 0 0 0 chr10 35570957 35570978 -104745787 + AT_rich Low_complexity Low_complexity 1 21 0 1787 113 0 4 chr10 35571075 35571322 -104745443 - AluSg/x SINE Alu 0 310 65 1268 152 0 33 chr10 35571617 35571821 -104744944 + AluJb SINE Alu 86 284 -28 2301 104 3 3 chr10 35571821 35572119 -104744646 - AluSg SINE Alu -12 298 1 25 0 0 0 chr10 35572126 35572151 -104744614 + AT_rich Low_complexity Low_complexity 1 25 0 2117 123 0 16 chr10 35573391 35573701 -104743064 - AluJb SINE Alu -7 305 1 3654 184 124 33 chr10 35573764 35575168 -104741597 + MER52A LTR ERV1 2 1755 0 296 319 115 6 chr10 35575187 35575344 -104741421 + MIR SINE MIR 66 239 -23 1859 166 3 10 chr10 35575737 35576045 -104740720 + AluJo SINE Alu 1 306 -6 540 267 91 9 chr10 35576711 35576921 -104739844 - MIR SINE MIR -24 238 12 2094 146 0 0 chr10 35577012 35577320 -104739445 + AluJb SINE Alu 1 308 -4 258 136 0 0 chr10 35577328 35577372 -104739393 + (GGAA)n Simple_repeat Simple_repeat 3 46 0 1111 184 209 0 chr10 35579569 35579826 -104736939 + AluJb SINE Alu 1 306 0 21 71 0 0 chr10 35580047 35580089 -104736676 + AT_rich Low_complexity Low_complexity 1 42 0 594 187 28 0 chr10 35580165 35580272 -104736493 + FLAM_C SINE Alu 2 111 -32 279 0 0 0 chr10 35580273 35580304 -104736461 + (TC)n Simple_repeat Simple_repeat 2 32 0 234 0 0 0 chr10 35580303 35580329 -104736436 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 2556 61 0 0 chr10 35580330 35580625 -104736140 - AluY SINE Alu -16 295 1 246 296 28 0 chr10 35580800 35580871 -104735894 - MIR SINE MIR -177 85 13 367 306 104 2 chr10 35581745 35581918 -104734847 - MIR3 SINE MIR 0 208 18 1270 96 0 0 chr10 35582088 35582255 -104734510 - AluSg/x SINE Alu -9 303 137 2550 164 7 29 chr10 35582438 35582890 -104733875 - LTR24 LTR ERV1 0 467 26 2058 141 0 28 chr10 35582890 35583210 -104733555 + AluSx SINE Alu 1 311 -1 362 200 30 20 chr10 35583289 35583389 -104733376 + AluS SINE Alu 1 101 -202 1777 133 15 52 chr10 35583563 35583672 -104733093 + AluSx SINE Alu 1 113 -199 2296 108 0 19 chr10 35583672 35583988 -104732777 + AluSg SINE Alu 1 310 0 1777 133 15 52 chr10 35583988 35584202 -104732563 + AluSx SINE Alu 113 312 0 3297 147 24 17 chr10 35584410 35584585 -104732180 - LTR49 LTR ERV1 0 595 423 970 77 7 28 chr10 35584585 35584728 -104732037 - L1PA10 LINE L1 0 6168 6029 3297 147 24 17 chr10 35584728 35585143 -104731622 - LTR49 LTR ERV1 -172 423 1 1427 163 7 43 chr10 35585485 35585786 -104730979 - LTR1 LTR ERV1 -495 290 1 1103 112 19 9 chr10 35585786 35585944 -104730821 - L1PB3 LINE L1 -198 5953 5802 330 67 0 0 chr10 35585944 35585989 -104730776 + (TG)n Simple_repeat Simple_repeat 1 45 0 1103 112 19 9 chr10 35585989 35586016 -104730749 - L1PB3 LINE L1 -349 5802 5777 272 257 20 20 chr10 35586016 35586117 -104730648 + (TATG)n Simple_repeat Simple_repeat 3 103 0 1544 103 13 13 chr10 35586117 35586129 -104730636 - L1PB3 LINE L1 -363 5791 5780 183 42 0 0 chr10 35586129 35586153 -104730612 + (TC)n Simple_repeat Simple_repeat 1 24 0 1544 103 13 13 chr10 35586153 35586373 -104730392 - L1PB3 LINE L1 -373 5781 5559 3683 139 43 129 chr10 35586373 35587896 -104728869 + pTR5 LTR ERV1 744 2606 0 847 142 8 8 chr10 35587896 35588030 -104728735 + pTR5 LTR ERV1 270 403 -2035 2636 175 59 1 chr10 35588030 35588855 -104727910 - L1P5 LINE L1 -613 5541 4668 792 134 195 0 chr10 35588858 35589007 -104727758 - LTR29 LTR ERV1 -285 337 160 616 172 10 0 chr10 35589036 35589135 -104727630 - AluJ/FLAM SINE Alu -211 101 2 297 309 62 48 chr10 35591789 35591999 -104724766 - MIR SINE MIR -3 259 47 1649 169 14 21 chr10 35592279 35592591 -104724174 + AluJo SINE Alu 1 310 0 3328 151 24 12 chr10 35593279 35593854 -104722911 - LTR49 LTR ERV1 -13 582 1 912 192 30 0 chr10 35594181 35594348 -104722417 - FRAM SINE Alu 0 176 5 3532 130 6 6 chr10 35594348 35594872 -104721893 + MER41B LTR ERV1 5 528 -107 24 32 0 0 chr10 35594878 35594909 -104721856 + AT_rich Low_complexity Low_complexity 1 31 0 854 84 42 0 chr10 35595763 35595882 -104720883 + MER41B LTR ERV1 512 635 0 257 269 0 0 chr10 35595893 35595960 -104720805 - MIR SINE MIR -56 152 86 421 288 59 51 chr10 35596632 35596868 -104719897 + Charlie8 DNA MER1_type 2 239 -2178 4600 86 13 0 chr10 35597053 35597673 -104719092 - L1PB2 LINE L1 -2 6149 5522 277 379 26 9 chr10 35597700 35597816 -104718949 - L2 LINE L2 -1 3312 3195 1889 204 105 11 chr10 35598126 35598478 -104718287 + MLT1D LTR MaLR 3 409 -96 1731 159 3 36 chr10 35598478 35598779 -104717986 - AluJo SINE Alu -21 291 1 1889 204 105 11 chr10 35598779 35598883 -104717882 + MLT1D LTR MaLR 409 502 -3 4180 102 14 55 chr10 35599774 35600301 -104716464 + L1MA3 LINE L1 5637 6131 -174 2165 106 6 39 chr10 35600301 35600612 -104716153 + AluSx SINE Alu 3 303 -9 4180 102 14 55 chr10 35600612 35600772 -104715993 + L1MA3 LINE L1 6131 6296 -9 2090 131 89 6 chr10 35601524 35601860 -104714905 + THE1B LTR MaLR 1 364 0 313 312 76 19 chr10 35602405 35602510 -104714255 + MIR SINE MIR 55 173 -89 2274 150 44 3 chr10 35602510 35602897 -104713868 + MER57A LTR ERV1 1 403 0 313 312 76 19 chr10 35602897 35602948 -104713817 + MIR SINE MIR 173 220 -42 886 130 0 8 chr10 35603021 35603152 -104713613 + AluSq/x SINE Alu 1 130 -182 1347 89 0 0 chr10 35603252 35603421 -104713344 + AluSp SINE Alu 132 300 -13 768 176 68 7 chr10 35603560 35603708 -104713057 + MER58A DNA MER1_type 37 193 -31 2191 132 0 0 chr10 35603712 35604022 -104712743 - AluSx SINE Alu -2 310 1 578 291 94 0 chr10 35604095 35604308 -104712457 - MLT1J LTR MaLR -278 233 1 947 195 95 0 chr10 35604523 35604723 -104712042 - MER20 DNA MER1_type 0 219 1 323 271 62 10 chr10 35605172 35605268 -104711497 - MER5A DNA MER1_type -8 181 81 1992 153 0 0 chr10 35606229 35606530 -104710235 + AluSx SINE Alu 1 301 -11 242 291 19 12 chr10 35606602 35606697 -104710068 + T-rich Low_complexity Low_complexity 2 163 0 625 112 0 35 chr10 35606862 35606978 -104709787 + (TTCC)n Simple_repeat Simple_repeat 2 113 0 777 186 23 0 chr10 35607008 35607137 -104709628 - FLAM_C SINE Alu 0 133 2 2481 176 32 0 chr10 35607607 35608039 -104708726 - MLT1C LTR MaLR 0 467 22 370 229 25 42 chr10 35608112 35608230 -104708535 - MER96B DNA MER1_type? -2 415 300 1295 195 74 27 chr10 35608257 35608555 -104708210 - AluJo SINE Alu 0 312 1 319 198 0 25 chr10 35608556 35608637 -104708128 + MER96B DNA MER1_type? 101 179 -238 2699 105 11 8 chr10 35609184 35609547 -104707218 - THE1B LTR MaLR 0 364 1 399 265 87 51 chr10 35609603 35609799 -104706966 + MIR3 SINE MIR 4 206 -2 228 330 0 9 chr10 35610773 35610879 -104705886 + (CA)n Simple_repeat Simple_repeat 1 105 0 2349 93 0 0 chr10 35610889 35611180 -104705585 - AluSx SINE Alu -19 293 3 1183 106 12 0 chr10 35611485 35611645 -104705120 + FRAM SINE Alu 2 163 -13 2175 113 0 0 chr10 35611876 35612169 -104704596 - AluSx SINE Alu -19 293 1 2199 204 81 38 chr10 35612637 35612782 -104703983 + MLT1E3 LTR MaLR 7 144 -480 2060 129 0 0 chr10 35612782 35613159 -104703606 + AluSc SINE Alu 1 377 0 2199 204 81 38 chr10 35613159 35613596 -104703169 + MLT1E3 LTR MaLR 144 615 -9 1396 162 128 26 chr10 35614644 35614910 -104701855 - AluJo SINE Alu -16 296 4 2211 125 3 0 chr10 35614969 35615280 -104701485 - AluSx SINE Alu 0 312 1 204 367 87 21 chr10 35615287 35615576 -104701189 + L2 LINE L2 2228 2535 -779 4762 131 10 19 chr10 35615634 35615990 -104700775 - L1PB3 LINE L1 -4 6150 5792 420 20 0 0 chr10 35615990 35616039 -104700726 + (TG)n Simple_repeat Simple_repeat 1 49 0 2904 99 0 0 chr10 35616039 35616401 -104700364 + THE1B LTR MaLR 3 364 0 4762 131 10 19 chr10 35616401 35616763 -104700002 - L1PB3 LINE L1 -360 5794 5438 426 174 35 0 chr10 35617411 35617497 -104699268 + MER81 DNA DNA 26 114 0 389 244 0 0 chr10 35617617 35617707 -104699058 + MLT1J LTR MaLR 415 504 -7 265 85 213 0 chr10 35618815 35618862 -104697903 - AluJo SINE Alu -4 298 242 1206 158 15 0 chr10 35618862 35619058 -104697707 - AluJo SINE Alu -113 199 1 1724 184 0 13 chr10 35619778 35620082 -104696683 + AluJo SINE Alu 1 300 -12 400 352 31 0 chr10 35621597 35621725 -104695040 - L2 LINE L2 0 3272 3141 342 53 0 105 chr10 35621770 35621827 -104694938 + L1MA3 LINE L1 6255 6305 0 684 297 32 11 chr10 35622175 35622360 -104694405 - MLT1I LTR MaLR -188 221 33 22 35 0 0 chr10 35623503 35623532 -104693233 + AT_rich Low_complexity Low_complexity 1 29 0 1869 176 0 3 chr10 35624018 35624320 -104692445 - AluJo SINE Alu -11 301 1 2708 115 8 8 chr10 35625489 35625864 -104690901 + THE1C LTR MaLR 1 375 0 395 311 77 66 chr10 35626180 35626650 -104690115 - L2 LINE L2 -1117 2197 1723 823 171 0 0 chr10 35626684 35626807 -104689958 - FLAM_C SINE Alu -20 123 1 3234 113 9 0 chr10 35626980 35627430 -104689335 + L1PA16 LINE L1 5704 6157 -9 509 286 136 14 chr10 35627449 35627662 -104689103 - MIR SINE MIR -21 241 3 1590 121 18 7 chr10 35627811 35628083 -104688682 + MER6 DNA MER2_type 319 853 -12 1746 148 26 23 chr10 35628706 35629010 -104687755 - AluJo SINE Alu -3 309 5 228 338 0 0 chr10 35629964 35630041 -104686724 - LTR67 LTR ERVL -8 549 473 2273 123 50 36 chr10 35630371 35630730 -104686035 + THE1B LTR MaLR 1 364 0 219 265 20 34 chr10 35631358 35631505 -104685260 + (TATAA)n Simple_repeat Simple_repeat 5 149 0 2547 139 23 77 chr10 35632639 35633248 -104683517 - MER4E LTR ERV1 0 779 1 186 43 0 0 chr10 35633273 35633296 -104683469 + (TTCTCC)n Simple_repeat Simple_repeat 1 23 0 1705 178 0 17 chr10 35633296 35633594 -104683171 - AluJb SINE Alu -9 303 11 24 32 0 0 chr10 35633670 35633701 -104683064 + AT_rich Low_complexity Low_complexity 1 31 0 3134 235 35 34 chr10 35634089 35634283 -104682482 - L1ME1 LINE L1 -14 6152 5960 408 82 0 184 chr10 35634283 35634381 -104682384 - MADE1 DNA Mariner 0 80 1 3134 235 35 34 chr10 35634381 35635157 -104681608 - L1ME1 LINE L1 -206 5960 5182 1560 153 73 11 chr10 35635215 35635490 -104681275 - AluJo SINE Alu -20 292 1 1461 196 41 4 chr10 35636256 35636527 -104680238 + AluJo SINE Alu 6 286 -26 222 62 0 0 chr10 35636532 35636564 -104680201 + (CATA)n Simple_repeat Simple_repeat 2 33 0 186 43 0 0 chr10 35637160 35637183 -104679582 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1385 164 0 9 chr10 35638131 35638345 -104678420 - AluSg/x SINE Alu -16 294 83 2471 156 95 5 chr10 35639559 35640044 -104676721 - MER61D LTR ERV1 0 734 1 1730 236 52 82 chr10 35640464 35641023 -104675742 + MLT1F1 LTR MaLR 1 567 0 313 309 16 8 chr10 35641023 35641149 -104675616 + L1ME4a LINE L1 5748 5874 -247 21 36 0 0 chr10 35641512 35641540 -104675225 + AT_rich Low_complexity Low_complexity 1 28 0 1878 153 3 0 chr10 35641598 35641886 -104674879 + AluSx SINE Alu 20 308 -4 2660 196 125 61 chr10 35642119 35642895 -104673870 + LTR1B LTR ERV1 1 826 0 234 316 246 6 chr10 35643354 35643525 -104673240 + MIR SINE MIR 40 251 -11 216 0 0 0 chr10 35643919 35643943 -104672822 + (T)n Simple_repeat Simple_repeat 1 24 0 623 283 47 32 chr10 35644319 35644541 -104672224 - MIR SINE MIR -33 229 16 690 337 104 19 chr10 35646290 35646703 -104670062 - L3b LINE CR1 -11 1572 1125 273 136 0 0 chr10 35647776 35647820 -104668945 + MADE1 DNA Mariner 1 44 -36 2158 98 28 0 chr10 35647836 35648123 -104668642 - L1PA10 LINE L1 -8 6160 5866 340 77 0 19 chr10 35648123 35648175 -104668590 + MADE1 DNA Mariner 30 80 0 291 343 66 29 chr10 35648563 35648700 -104668065 - MIR3 SINE MIR -30 178 37 298 297 25 25 chr10 35649809 35649927 -104666838 + L3 LINE CR1 1390 1507 -70 2125 124 0 0 chr10 35651069 35651360 -104665405 + AluSg SINE Alu 1 291 -19 231 229 152 76 chr10 35652408 35652513 -104664252 - MIR SINE MIR -62 146 34 264 261 0 14 chr10 35654112 35654181 -104662584 - MIR3 SINE MIR -52 156 89 216 253 10 111 chr10 35654337 35654436 -104662329 - MER5A DNA MER1_type -13 176 88 211 313 45 0 chr10 35655344 35655411 -104661354 + MIR SINE MIR 42 111 -97 434 293 100 30 chr10 35655599 35655869 -104660896 + L3b LINE CR1 1129 1417 -166 1237 241 96 14 chr10 35655908 35656273 -104660492 - MLT1G LTR MaLR -1 589 195 4583 179 8 25 chr10 35656349 35657200 -104659565 - L1MA10 LINE L1 0 6334 5498 642 140 0 0 chr10 35657200 35657293 -104659472 + L1M2 LINE L1 5370 5462 -850 357 326 60 21 chr10 35657293 35657492 -104659273 - MLT1G LTR MaLR -332 263 9 207 244 157 70 chr10 35657519 35657634 -104659131 - L2 LINE L2 0 3272 3148 737 282 4 61 chr10 35658653 35658930 -104657835 - MIR SINE MIR -1 261 1 1777 186 0 0 chr10 35658996 35659308 -104657457 - AluSx SINE Alu 0 312 1 195 353 73 0 chr10 35659427 35659495 -104657270 - L2 LINE L2 0 3272 3200 1864 87 65 4 chr10 35659719 35659995 -104656770 - AluSg SINE Alu -17 293 1 379 235 118 15 chr10 35659998 35660134 -104656631 - MIR SINE MIR -7 255 106 1477 195 0 17 chr10 35660307 35660594 -104656171 - AluJo SINE Alu -20 292 11 25 0 0 0 chr10 35662310 35662335 -104654430 + AT_rich Low_complexity Low_complexity 1 25 0 573 140 0 65 chr10 35662335 35662442 -104654323 - FRAM SINE Alu -15 161 62 1692 141 60 20 chr10 35662921 35663220 -104653545 + AluSx SINE Alu 1 311 -1 837 169 29 3 chr10 35663618 35663941 -104652824 + CT-rich Low_complexity Low_complexity 1 331 0 917 168 7 0 chr10 35663945 35664100 -104652665 - AluSg/x SINE Alu -32 280 125 2157 72 0 10 chr10 35664115 35664406 -104652359 - AluY SINE Alu -16 295 8 262 340 31 0 chr10 35664728 35664825 -104651940 + MIR3 SINE MIR 58 157 -51 418 156 0 13 chr10 35666131 35666208 -104650557 + MER116 DNA Mariner 1 76 -4 778 187 7 14 chr10 35666409 35666548 -104650217 + AluJo SINE Alu 2 139 -173 1590 191 29 38 chr10 35666976 35667093 -104649672 - MER1B DNA MER1_type -2373 337 220 2367 80 0 0 chr10 35667093 35667393 -104649372 - AluSc SINE Alu -9 300 1 1590 191 29 38 chr10 35667393 35667615 -104649150 - MER1B DNA MER1_type -2490 220 1 207 250 59 15 chr10 35667646 35667714 -104649051 - L3b LINE CR1 -231 1352 1282 249 314 80 40 chr10 35667988 35668029 -104648736 + L2 LINE L2 2565 2603 -711 1554 169 47 14 chr10 35668029 35668325 -104648440 - AluJo SINE Alu -6 306 1 249 314 80 40 chr10 35668325 35668458 -104648307 + L2 LINE L2 2603 2746 -568 227 280 136 30 chr10 35668564 35668696 -104648069 + L2 LINE L2 2933 3078 -194 4374 64 4 0 chr10 35668736 35669282 -104647483 - L1PA7 LINE L1 -16 6138 5591 2339 147 26 8 chr10 35670251 35670631 -104646134 + LTR45B LTR ERV1 3 389 -100 2989 177 34 72 chr10 35670678 35671357 -104645408 + L1PB4 LINE L1 5493 6145 -11 180 0 0 0 chr10 35671358 35671378 -104645387 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 2187 131 0 0 chr10 35671469 35671781 -104644984 - AluSx SINE Alu 0 312 1 333 288 58 63 chr10 35672713 35672904 -104643861 - MIR SINE MIR -67 195 6 253 322 0 0 chr10 35673471 35673530 -104643235 - L2 LINE L2 -86 3186 3128 321 288 8 68 chr10 35673685 35673803 -104642962 - L2 LINE L2 0 3313 3203 186 167 0 0 chr10 35674251 35674287 -104642478 + A-rich Low_complexity Low_complexity 2 37 0 2131 106 3 0 chr10 35674486 35674779 -104641986 + AluSp SINE Alu 2 295 -18 2247 167 83 2 chr10 35675455 35675641 -104641124 - MSTC LTR MaLR 0 428 258 2162 95 0 10 chr10 35675641 35675945 -104640820 - AluSc SINE Alu -8 301 1 2247 167 83 2 chr10 35675945 35676154 -104640611 - MSTC LTR MaLR -170 258 1 305 260 96 39 chr10 35676215 35676306 -104640459 + L2 LINE L2 3203 3302 -11 1956 118 28 0 chr10 35676306 35676594 -104640171 + AluSx SINE Alu 5 300 -12 305 260 96 39 chr10 35676594 35676606 -104640159 + L2 LINE L2 3302 3312 -1 265 285 51 51 chr10 35676712 35676849 -104639916 - MER5B DNA MER1_type 0 178 42 * 269 328 0 0 chr10 35676837 35676898 -104639867 + L2 LINE L2 3128 3188 -84 2194 107 0 7 chr10 35677518 35677827 -104638938 + AluSx SINE Alu 1 307 -5 235 227 0 30 chr10 35678072 35678138 -104638627 + GA-rich Low_complexity Low_complexity 4 67 0 25 0 0 0 chr10 35678807 35678832 -104637933 + AT_rich Low_complexity Low_complexity 1 25 0 2124 87 3 17 chr10 35679749 35680047 -104636718 + AluSq SINE Alu 1 294 -19 284 217 12 12 chr10 35680274 35680357 -104636408 - MLT1J1 LTR MaLR 0 446 364 2355 66 0 10 chr10 35680358 35680661 -104636104 + AluY SINE Alu 1 300 -11 1899 119 35 0 chr10 35680762 35681048 -104635717 - AluY SINE Alu -15 296 1 234 160 40 20 chr10 35681131 35681175 -104635590 - MLT1J2 LTR MaLR -283 167 123 982 251 103 13 chr10 35681175 35681609 -104635156 - MLT1G1 LTR MaLR -2 593 38 395 206 27 0 chr10 35682235 35682308 -104634457 - L2 LINE L2 0 3272 3198 21 36 0 0 chr10 35683381 35683409 -104633356 + AT_rich Low_complexity Low_complexity 1 28 0 2692 147 12 0 chr10 35683481 35683897 -104632868 + MSTB LTR MaLR 5 425 -1 2713 169 27 4 chr10 35684201 35684721 -104632044 + L1MB3 LINE L1 5652 6183 0 984 271 80 39 chr10 35684728 35684777 -104631988 + HAL1 LINE L1 1032 1078 -1429 2053 117 3 7 chr10 35684777 35685076 -104631689 + AluSx SINE Alu 7 304 -8 984 271 80 39 chr10 35685076 35685561 -104631204 + HAL1 LINE L1 1078 1588 -919 2050 97 7 7 chr10 35685574 35685862 -104630903 - AluSp SINE Alu -25 288 1 391 320 87 0 chr10 35686104 35686276 -104630489 - HAL1 LINE L1 -710 1797 1611 520 254 21 42 chr10 35687033 35687226 -104629539 - MER5A DNA MER1_type 0 189 1 288 304 29 0 chr10 35687515 35687584 -104629181 - L2 LINE L2 -5 3308 3238 839 163 0 0 chr10 35687608 35687737 -104629028 + FLAM_A SINE Alu 1 129 -4 895 205 96 38 chr10 35687933 35688172 -104628593 + LTR65 LTR ERV1 169 421 -248 516 315 31 44 chr10 35688341 35688662 -104628103 + MER90 LTR ERV1 294 610 -4 791 251 0 43 chr10 35688708 35688915 -104627850 + MER63A DNA MER1_type 13 210 0 649 303 34 8 chr10 35690124 35690362 -104626403 + LTR33A LTR ERVL 280 523 0 193 273 91 15 chr10 35690499 35690565 -104626200 - L2 LINE L2 -247 3025 2955 363 23 0 0 chr10 35691596 35691640 -104625125 + (TC)n Simple_repeat Simple_repeat 1 44 0 22 0 0 0 chr10 35693545 35693567 -104623198 + AT_rich Low_complexity Low_complexity 1 22 0 2680 58 12 85 chr10 35693997 35694295 -104622470 + L1PB1 LINE L1 5629 5954 -197 2464 40 0 13 chr10 35694295 35694599 -104622166 + AluY SINE Alu 1 300 -11 2680 58 12 85 chr10 35694599 35694784 -104621981 + L1PB1 LINE L1 5954 6151 0 756 279 36 27 chr10 35694913 35695174 -104621591 + MIR SINE MIR 1 258 -4 2220 102 0 10 chr10 35696224 35696529 -104620236 - AluSx SINE Alu -10 302 1 291 346 94 30 chr10 35696570 35696832 -104619933 - L2 LINE L2 -245 3068 2786 455 242 101 7 chr10 35696875 35697024 -104619741 - MLT1H1 LTR MaLR -1 554 392 2018 142 0 0 chr10 35697132 35697427 -104619338 - AluSx SINE Alu -17 295 1 232 326 61 20 chr10 35697594 35697692 -104619073 - L2 LINE L2 -517 2797 2696 799 172 0 0 chr10 35697795 35697917 -104618848 - FLAM_A SINE Alu -10 123 2 182 293 121 0 chr10 35698452 35698510 -104618255 - MIR SINE MIR -150 112 48 1365 165 115 4 chr10 35698510 35698771 -104617994 - AluJo SINE Alu -16 296 7 192 161 0 0 chr10 35698773 35698804 -104617961 - MIR SINE MIR -147 61 31 2202 106 0 0 chr10 35698809 35699111 -104617654 - AluSx SINE Alu -10 302 1 192 305 107 30 chr10 35699137 35699268 -104617497 - MIR SINE MIR -26 236 96 264 185 0 0 chr10 35699494 35699548 -104617217 + GA-rich Low_complexity Low_complexity 2 55 0 1793 184 0 0 chr10 35700946 35701256 -104615509 - AluJo SINE Alu -2 310 1 440 209 0 0 chr10 35701256 35701342 -104615423 - AluJb SINE Alu -171 141 56 2081 103 0 3 chr10 35702617 35702908 -104613857 - AluSg SINE Alu -20 290 1 1539 185 3 20 chr10 35702950 35703253 -104613512 - AluJo SINE Alu -14 298 1 1847 269 66 55 chr10 35703253 35704298 -104612467 - HAL1b LINE L1 -219 1129 73 2136 86 0 57 chr10 35704396 35704711 -104612054 - AluSq SINE Alu -16 297 1 668 271 129 55 chr10 35705198 35705601 -104611164 - MLT1J LTR MaLR -17 494 62 354 235 0 92 chr10 35705623 35705721 -104611044 - L1MC4 LINE L1 -1340 6702 6614 * 371 271 24 0 chr10 35705650 35705735 -104611030 + L1MC4 LINE L1 6617 6703 -1339 232 300 0 0 chr10 35705745 35705835 -104610930 - L1MC4 LINE L1 -1339 6703 6614 213 121 0 0 chr10 35705835 35705868 -104610897 + (TA)n Simple_repeat Simple_repeat 1 33 0 795 188 12 18 chr10 35705874 35706039 -104610726 - FRAM SINE Alu -2 164 1 195 159 143 48 chr10 35706155 35706218 -104610547 + L2 LINE L2 3034 3102 -170 1335 161 98 42 chr10 35706661 35706947 -104609818 - AluSx SINE Alu -8 304 3 21 0 0 0 chr10 35707134 35707155 -104609610 + AT_rich Low_complexity Low_complexity 1 21 0 2750 3 0 0 chr10 35707598 35707902 -104608863 - AluYa5 SINE Alu -7 304 1 216 0 0 0 chr10 35707919 35707943 -104608822 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1070 211 13 9 chr10 35708046 35708278 -104608487 - AluJo SINE Alu -3 309 77 533 333 0 29 chr10 35708290 35708494 -104608271 - L2 LINE L2 -8 3305 3108 876 150 0 15 chr10 35709102 35709235 -104607530 + FLAM_C SINE Alu 1 131 -2 469 233 78 70 chr10 35709300 35709588 -104607177 + MLT1J2 LTR MaLR 123 449 -1 299 293 204 49 chr10 35709677 35709902 -104606863 + MIR SINE MIR 2 261 -1 22 0 0 0 chr10 35710151 35710173 -104606592 + AT_rich Low_complexity Low_complexity 1 22 0 396 186 21 41 chr10 35711379 35711476 -104605289 - MER5A DNA MER1_type -86 103 9 286 254 0 127 chr10 35711561 35711671 -104605094 + MIR SINE MIR 88 183 -79 29 47 0 0 chr10 35713638 35713681 -104603084 + AT_rich Low_complexity Low_complexity 1 43 0 208 111 67 0 chr10 35714736 35714781 -104601984 + GA-rich Low_complexity Low_complexity 2 49 0 407 264 50 14 chr10 35717483 35717564 -104599201 + MIR SINE MIR 117 207 -55 1779 164 20 3 chr10 35717564 35717862 -104598903 + AluJb SINE Alu 1 303 -9 407 264 50 14 chr10 35717862 35717920 -104598845 + MIR SINE MIR 207 261 -1 264 59 0 0 chr10 35718575 35718609 -104598156 + (CA)n Simple_repeat Simple_repeat 2 35 0 1349 176 83 47 chr10 35718795 35719096 -104597669 + AluJo SINE Alu 1 312 0 472 193 9 55 chr10 35719372 35719481 -104597284 + L2 LINE L2 3210 3313 0 2143 122 0 13 chr10 35719758 35720062 -104596703 - AluSx SINE Alu -12 300 1 25 31 0 0 chr10 35720511 35720543 -104596222 + AT_rich Low_complexity Low_complexity 1 32 0 189 0 0 0 chr10 35722604 35722625 -104594140 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1610 157 0 53 chr10 35722638 35722919 -104593846 - AluJo SINE Alu -46 266 1 290 314 67 0 chr10 35724127 35724232 -104592533 + L2 LINE L2 3143 3254 -18 1640 111 13 114 chr10 35724341 35724657 -104592108 + AluJb SINE Alu 1 284 -28 243 0 0 0 chr10 35724657 35724684 -104592081 + (TA)n Simple_repeat Simple_repeat 1 27 0 193 268 0 0 chr10 35724696 35724737 -104592028 + L2 LINE L2 2717 2757 -557 226 315 63 27 chr10 35725241 35725352 -104591413 + L2 LINE L2 3153 3267 -5 321 118 0 0 chr10 35726511 35726562 -104590203 + (TG)n Simple_repeat Simple_repeat 2 52 0 1509 186 19 38 chr10 35726587 35726904 -104589861 - AluJo SINE Alu -1 311 1 354 232 90 32 chr10 35727252 35727407 -104589358 + L1MC5 LINE L1 7746 7909 -52 2129 135 0 3 chr10 35727443 35727747 -104589018 + AluSg SINE Alu 1 303 -7 276 281 11 11 chr10 35730566 35730655 -104586110 + GA-rich Low_complexity Low_complexity 4 92 0 25 0 0 0 chr10 35733669 35733694 -104583071 + AT_rich Low_complexity Low_complexity 1 25 0 969 118 34 56 chr10 35733694 35733872 -104582893 - L1MA8 LINE L1 -3 6288 6115 2420 95 0 19 chr10 35733872 35734188 -104582577 - AluSx SINE Alu -2 310 1 324 284 10 118 chr10 35734817 35734956 -104581809 + MER5A DNA MER1_type 8 120 -69 1585 154 6 77 chr10 35734956 35735114 -104581651 - AluJo SINE Alu -23 289 162 207 0 0 0 chr10 35735114 35735137 -104581628 + (TA)n Simple_repeat Simple_repeat 2 24 0 1585 154 6 77 chr10 35735137 35735289 -104581476 - AluJo SINE Alu -150 162 1 324 284 10 118 chr10 35735289 35735353 -104581412 + MER5A DNA MER1_type 120 189 0 2605 7 0 0 chr10 35739469 35739748 -104577017 - AluYb8 SINE Alu -1 317 39 2393 104 0 0 chr10 35740470 35740778 -104575987 - AluSq SINE Alu -5 308 1 205 257 83 73 chr10 35740829 35740938 -104575827 + L2 LINE L2 3162 3271 -1 3608 119 50 103 chr10 35741129 35741857 -104574908 - LTR8 LTR ERV1 -2 689 1 788 190 87 20 chr10 35742856 35743051 -104573714 + L1MB5 LINE L1 5959 6166 -8 1755 160 3 3 chr10 35743684 35743972 -104572793 - AluJb SINE Alu -24 288 1 829 168 0 0 chr10 35743973 35744098 -104572667 - AluJb SINE Alu -186 126 2 324 225 22 0 chr10 35744405 35744494 -104572271 - MIR SINE MIR -3 259 169 2311 121 0 0 chr10 35744646 35744953 -104571812 - AluSx SINE Alu -5 307 1 586 258 53 7 chr10 35745021 35745172 -104571593 - MIR SINE MIR -91 171 14 2068 125 0 0 chr10 35745221 35745510 -104571255 - AluSx SINE Alu -10 302 14 221 299 78 26 chr10 35745518 35745595 -104571170 - MIR3 SINE MIR -52 156 76 2631 144 57 2 chr10 35747986 35748423 -104568342 + L1MB2 LINE L1 5706 6166 -5 2058 129 3 3 chr10 35748423 35748717 -104568048 - AluSx SINE Alu -18 294 1 229 266 101 13 chr10 35749914 35749993 -104566772 - L2 LINE L2 -204 3068 2983 1353 139 12 141 chr10 35750412 35750789 -104565976 + L1MB3 LINE L1 5857 6183 0 188 261 43 0 chr10 35751511 35751557 -104565208 + L2 LINE L2 2713 2760 -554 2464 58 10 0 chr10 35751872 35752180 -104564585 - AluY SINE Alu 0 311 1 1693 164 41 7 chr10 35752196 35752488 -104564277 - AluJo SINE Alu -10 302 1 252 311 57 8 chr10 35752535 35752657 -104564108 + L2 LINE L2 3185 3312 -1 1013 144 16 57 chr10 35753320 35753514 -104563251 + MER53 DNA DNA 3 188 -1 2403 92 0 22 chr10 35754074 35754391 -104562374 - AluY SINE Alu -1 310 1 275 345 115 0 chr10 35754605 35754718 -104562047 - L2 LINE L2 -1 3271 3146 215 309 152 31 chr10 35754914 35755105 -104561660 - MIR SINE MIR -12 250 37 2252 108 0 16 chr10 35756360 35756676 -104560089 + AluSx SINE Alu 1 311 -1 1460 179 79 10 chr10 35756695 35756986 -104559779 + AluJo SINE Alu 1 311 -1 355 282 114 23 chr10 35756997 35757128 -104559637 - L2 LINE L2 -2 3311 3169 * 512 285 41 27 chr10 35757124 35757345 -104559420 - MIR SINE MIR -21 241 18 1808 120 0 15 chr10 35758245 35758545 -104558220 - AluSx SINE Alu 0 322 27 1755 163 0 24 chr10 35759085 35759374 -104557391 + AluJo SINE Alu 1 282 -30 1946 123 18 3 chr10 35760300 35760584 -104556181 - L1PA11 LINE L1 0 6174 5887 2781 118 106 34 chr10 35762226 35762805 -104553960 + MER4B LTR ERV1 1 779 0 390 300 0 0 chr10 35763582 35763672 -104553093 + MIR3 SINE MIR 111 200 -8 21 82 0 0 chr10 35763801 35763850 -104552915 + AT_rich Low_complexity Low_complexity 1 49 0 879 152 0 26 chr10 35763971 35764163 -104552602 + AluSg/x SINE Alu 134 321 0 25 83 0 0 chr10 35764570 35764630 -104552135 + AT_rich Low_complexity Low_complexity 1 60 0 794 185 32 37 chr10 35764785 35764974 -104551791 + MER53 DNA DNA 2 189 0 1425 201 60 104 chr10 35766061 35766344 -104550421 + MER34 LTR ERV1 1 248 -294 384 22 0 0 chr10 35766344 35766389 -104550376 + (TG)n Simple_repeat Simple_repeat 2 46 0 1425 201 60 104 chr10 35766389 35766672 -104550093 + MER34 LTR ERV1 248 542 0 2249 108 3 16 chr10 35768379 35768694 -104548071 - AluSx SINE Alu -1 311 1 430 316 82 37 chr10 35769872 35770116 -104546649 - MIR SINE MIR -2 260 6 183 354 0 0 chr10 35772577 35772625 -104544140 - L2 LINE L2 -15 3257 3210 * 209 304 183 35 chr10 35772596 35772711 -104544054 - MIR SINE MIR -28 234 103 300 111 0 0 chr10 35773219 35773264 -104543501 + (CA)n Simple_repeat Simple_repeat 2 46 0 1622 149 100 0 chr10 35773317 35773598 -104543167 - AluSx SINE Alu -3 309 1 180 158 0 0 chr10 35773679 35773717 -104543048 + (CA)n Simple_repeat Simple_repeat 2 39 0 262 360 81 12 chr10 35774383 35774544 -104542221 + MIR SINE MIR 8 179 -83 285 29 0 0 chr10 35774652 35774686 -104542079 + (TG)n Simple_repeat Simple_repeat 1 34 0 2086 124 10 0 chr10 35774755 35775046 -104541719 + AluJb SINE Alu 1 294 -18 248 222 0 0 chr10 35775085 35775130 -104541635 + L2 LINE L2 3220 3264 -8 192 40 0 0 chr10 35775936 35775961 -104540804 + (CA)n Simple_repeat Simple_repeat 1 25 0 189 0 0 0 chr10 35777389 35777410 -104539355 + (TGG)n Simple_repeat Simple_repeat 3 23 0 216 333 0 13 chr10 35779126 35779204 -104537561 - L3 LINE CR1 -1 1576 1500 227 186 23 0 chr10 35779629 35779672 -104537093 + GA-rich Low_complexity Low_complexity 4 47 0 288 0 0 0 chr10 35779680 35779712 -104537053 + (TG)n Simple_repeat Simple_repeat 1 32 0 789 263 9 31 chr10 35780979 35781203 -104535562 + MER20 DNA MER1_type 1 219 0 356 308 133 14 chr10 35781377 35781520 -104535245 + MIR3 SINE MIR 28 187 -21 243 0 0 0 chr10 35782330 35782357 -104534408 + (CA)n Simple_repeat Simple_repeat 2 28 0 293 268 73 49 chr10 35783627 35783750 -104533015 + MIR SINE MIR 87 212 -50 2246 99 0 7 chr10 35783752 35784045 -104532720 + AluSx SINE Alu 1 291 -21 216 0 0 0 chr10 35784831 35784855 -104531910 + (T)n Simple_repeat Simple_repeat 1 24 0 418 279 117 11 chr10 35786374 35786553 -104530212 + MIR SINE MIR 34 231 -31 598 279 77 31 chr10 35786606 35786764 -104530001 + MLT1I LTR MaLR 37 186 -223 1983 116 54 85 chr10 35786764 35787151 -104529614 + THE1C LTR MaLR 1 375 0 598 279 77 31 chr10 35787151 35787279 -104529486 + MLT1I LTR MaLR 186 336 -73 3929 146 101 17 chr10 35787631 35788355 -104528410 + LTR1 LTR ERV1 1 785 0 28 48 0 0 chr10 35790294 35790336 -104526429 + AT_rich Low_complexity Low_complexity 1 42 0 1658 192 13 0 chr10 35791189 35791497 -104525268 - AluJo SINE Alu 0 312 1 2038 110 45 3 chr10 35793101 35793391 -104523374 + AluSx SINE Alu 1 302 -10 1708 167 0 32 chr10 35795599 35795910 -104520855 - AluJo SINE Alu -11 301 1 234 0 0 0 chr10 35796732 35796758 -104520007 + (A)n Simple_repeat Simple_repeat 1 26 0 2057 136 3 3 chr10 35797480 35797782 -104518983 - AluSx SINE Alu -10 302 1 785 215 32 148 chr10 35798073 35798167 -104518598 + L2 LINE L2 2960 3063 -250 2356 99 0 0 chr10 35798167 35798469 -104518296 + AluSq SINE Alu 1 302 -11 785 215 32 148 chr10 35798469 35798774 -104517991 + L2 LINE L2 3063 3313 0 299 255 47 19 chr10 35798952 35799058 -104517707 + MIR3 SINE MIR 98 206 -2 398 302 104 16 chr10 35799071 35799253 -104517512 + MIR3 SINE MIR 8 205 -3 2108 88 0 31 chr10 35800569 35800902 -104515863 + AluSx SINE Alu 1 324 0 414 297 32 60 chr10 35802058 35802243 -104514522 + MIR3 SINE MIR 24 203 -5 2869 100 12 21 chr10 35802383 35802578 -104514187 + MSTA LTR MaLR 1 196 -232 1881 62 0 0 chr10 35802578 35802804 -104513961 + AluY SINE Alu 82 307 -4 2869 100 12 21 chr10 35802804 35803029 -104513736 + MSTA LTR MaLR 196 417 -11 496 293 93 18 chr10 35805408 35805633 -104511132 - MLT1K LTR MaLR -15 573 332 2526 171 20 34 chr10 35805997 35806437 -104510328 - Tigger2a DNA MER2_type 0 434 1 209 157 0 39 chr10 35806451 35806502 -104510263 + T-rich Low_complexity Low_complexity 2 50 0 2071 131 3 3 chr10 35806624 35806921 -104509844 - AluSx SINE Alu -15 297 1 21 0 0 0 chr10 35807545 35807566 -104509199 + AT_rich Low_complexity Low_complexity 1 21 0 239 322 99 47 chr10 35807639 35807707 -104509058 + MIR3 SINE MIR 23 86 -122 4622 171 52 40 chr10 35807707 35808598 -104508167 + MER54A LTR ERVL 1 901 0 239 322 99 47 chr10 35808598 35808700 -104508065 + MIR3 SINE MIR 86 202 -6 1868 116 0 4 chr10 35811577 35811828 -104504937 + AluSc SINE Alu 46 295 -14 526 290 97 6 chr10 35813205 35813381 -104503384 + MIR SINE MIR 46 237 -25 207 322 67 0 chr10 35813593 35813683 -104503082 - L3 LINE CR1 -505 1072 977 203 327 0 0 chr10 35813958 35814010 -104502755 + (TG)n Simple_repeat Simple_repeat 2 53 0 362 351 50 50 chr10 35814164 35814423 -104502342 + L2 LINE L2 2990 3248 -24 298 351 40 0 chr10 35814538 35814686 -104502079 - MIR SINE MIR -6 256 103 23 0 0 0 chr10 35815269 35815292 -104501473 + AT_rich Low_complexity Low_complexity 1 23 0 726 291 36 8 chr10 35816235 35816486 -104500279 + MER46C DNA MER2_type 80 337 -1 2398 314 149 36 chr10 35816524 35817296 -104499469 + L2 LINE L2 839 1523 -1790 1565 188 20 14 chr10 35817296 35817589 -104499176 + AluJo SINE Alu 1 295 -17 2398 314 149 36 chr10 35817589 35818787 -104497978 + L2 LINE L2 1523 3039 -274 236 340 7 49 chr10 35818886 35819030 -104497735 + L2 LINE L2 2550 2687 -627 2248 106 3 0 chr10 35819074 35819376 -104497389 - AluSc SINE Alu -6 303 1 303 300 8 33 chr10 35819510 35819630 -104497135 + L2 LINE L2 2938 3054 -218 696 246 126 15 chr10 35819787 35819986 -104496779 + MIR SINE MIR 29 249 -13 2312 123 13 60 chr10 35820285 35820518 -104496247 + THE1B LTR MaLR 1 211 -153 1942 118 42 14 chr10 35820518 35820807 -104495958 - AluSx SINE Alu -13 299 3 2312 123 13 60 chr10 35820807 35820955 -104495810 + THE1B LTR MaLR 211 364 0 849 203 79 11 chr10 35821217 35821394 -104495371 + MER5A DNA MER1_type 1 189 0 212 59 29 0 chr10 35821611 35821645 -104495120 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1231 191 0 9 chr10 35821653 35821873 -104494892 - AluJo SINE Alu -24 288 71 2768 86 31 17 chr10 35822719 35823078 -104493687 - THE1B LTR MaLR 0 364 1 201 324 54 9 chr10 35823346 35823457 -104493308 + L2 LINE L2 1552 1667 -1647 1204 207 93 77 chr10 35823495 35823761 -104493004 - MLT1B LTR MaLR -7 383 108 2006 139 7 0 chr10 35823761 35824056 -104492709 - AluSx SINE Alu -14 298 2 1204 207 93 77 chr10 35824056 35824166 -104492599 - MLT1B LTR MaLR -282 108 1 1141 216 22 48 chr10 35824241 35824556 -104492209 - MLT1A1 LTR MaLR 0 365 59 22 0 0 0 chr10 35825099 35825121 -104491644 + AT_rich Low_complexity Low_complexity 1 22 0 2771 127 39 10 chr10 35825141 35825557 -104491208 + MSTA LTR MaLR 1 428 0 186 68 0 68 chr10 35825750 35825794 -104490971 + (GAAA)n Simple_repeat Simple_repeat 4 44 0 21 36 0 0 chr10 35825933 35825961 -104490804 + AT_rich Low_complexity Low_complexity 1 28 0 189 74 0 0 chr10 35826502 35826529 -104490236 + (TC)n Simple_repeat Simple_repeat 2 28 0 225 333 14 0 chr10 35827464 35827533 -104489232 + MIR SINE MIR 83 152 -56 544 296 143 12 chr10 35827791 35828197 -104488568 - L1MC4a LINE L1 -1805 6003 5545 489 232 190 45 chr10 35828395 35828753 -104488012 + MLT1J1 LTR MaLR 18 427 -19 200 347 121 16 chr10 35828774 35828964 -104487801 + L2 LINE L2 2587 2796 -518 3675 115 46 3 chr10 35829114 35829681 -104487084 + LTR26 LTR ERV1 13 603 0 384 289 47 34 chr10 35829893 35830042 -104486723 - MIR3 SINE MIR -12 196 46 252 271 71 35 chr10 35831149 35831234 -104485531 - L2 LINE L2 -50 3263 3176 186 71 0 0 chr10 35831434 35831462 -104485303 + (GGCTG)n Simple_repeat Simple_repeat 3 30 0 1290 249 158 13 chr10 35831679 35832328 -104484437 - L2 LINE L2 -172 3141 2411 209 370 87 0 chr10 35832415 35832507 -104484258 - MIR3 SINE MIR -11 197 98 2210 91 0 0 chr10 35832527 35832802 -104483963 + AluY SINE Alu 23 297 -14 1274 192 30 0 chr10 35832808 35833042 -104483723 - MSTB LTR MaLR -2 424 184 1768 128 77 36 chr10 35833210 35833547 -104483218 - THE1C LTR MaLR 0 375 25 453 56 0 0 chr10 35833548 35833602 -104483163 - THE1C LTR MaLR -317 58 5 1491 194 121 35 chr10 35833649 35834045 -104482720 - MSTB1 LTR MaLR 0 432 3 241 239 70 14 chr10 35834621 35834692 -104482073 - MIR SINE MIR -1 261 187 250 341 11 11 chr10 35834750 35834838 -104481927 + MIR SINE MIR 60 147 -115 2062 141 3 3 chr10 35835056 35835361 -104481404 - AluSq SINE Alu -8 305 1 2497 127 82 20 chr10 35835581 35835984 -104480781 - MSTC LTR MaLR 0 428 1 2036 116 18 0 chr10 35836218 35836502 -104480263 - AluSg SINE Alu -9 301 13 1799 158 41 7 chr10 35836971 35837287 -104479478 + AluSx SINE Alu 1 312 0 28 29 0 0 chr10 35838398 35838433 -104478332 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr10 35838750 35838774 -104477991 + AT_rich Low_complexity Low_complexity 1 24 0 1324 156 49 0 chr10 35838848 35839073 -104477692 - MER46A DNA MER2_type 0 236 1 193 328 69 0 chr10 35839343 35839401 -104477364 + MIR SINE MIR 50 111 -151 200 270 63 72 chr10 35839979 35840090 -104476675 + MIR SINE MIR 25 134 -128 217 276 26 40 chr10 35840568 35840644 -104476121 - MIR3 SINE MIR -51 157 83 1547 160 51 24 chr10 35841024 35841317 -104475448 - AluJo SINE Alu -11 301 1 1878 111 0 4 chr10 35841954 35842215 -104474550 - AluSx SINE Alu 0 312 53 436 254 81 41 chr10 35842224 35842421 -104474344 - MIR SINE MIR -12 250 46 21 57 0 0 chr10 35842551 35842586 -104474179 + AT_rich Low_complexity Low_complexity 1 35 0 328 307 79 7 chr10 35842935 35843075 -104473690 - L2 LINE L2 -4 3309 3160 2345 135 39 36 chr10 35847485 35847848 -104468917 - THE1B LTR MaLR 0 364 1 323 376 7 7 chr10 35848271 35848420 -104468345 + MIR3 SINE MIR 57 205 -3 195 174 22 43 chr10 35848565 35848611 -104468154 - L2 LINE L2 -23 3249 3205 208 279 302 0 chr10 35849515 35849644 -104467121 + MIR3 SINE MIR 36 203 -5 2389 89 0 6 chr10 35849689 35850004 -104466761 - AluSq SINE Alu 0 313 1 207 171 0 0 chr10 35850289 35850324 -104466441 + T-rich Low_complexity Low_complexity 3 37 0 2566 74 0 0 chr10 35850614 35850953 -104465812 - AluY SINE Alu 0 339 1 1629 180 14 11 chr10 35850990 35851274 -104465491 - AluJo SINE Alu -27 285 1 911 156 24 30 chr10 35852129 35852296 -104464469 - AluJo SINE Alu -26 286 121 3736 143 8 4 chr10 35852400 35852923 -104463842 + MER1A DNA MER1_type 3 527 0 2210 121 0 0 chr10 35853151 35853449 -104463316 - AluSx SINE Alu -14 298 1 400 84 14 28 chr10 35855311 35855382 -104461383 + (GGA)n Simple_repeat Simple_repeat 3 72 0 21 0 0 0 chr10 35857039 35857060 -104459705 + AT_rich Low_complexity Low_complexity 1 21 0 973 106 0 0 chr10 35857117 35857249 -104459516 + AluSc SINE Alu 165 296 -13 2111 118 7 3 chr10 35857907 35858204 -104458561 - AluSg SINE Alu -12 298 1 1575 175 9 47 chr10 35859282 35859602 -104457163 - AluJo SINE Alu -4 308 1 663 164 18 18 chr10 35860009 35860119 -104456646 + FLAM_C SINE Alu 2 111 -32 24 53 0 0 chr10 35860133 35860171 -104456594 + AT_rich Low_complexity Low_complexity 1 38 0 1933 97 38 17 chr10 35861563 35861851 -104454914 - AluSq SINE Alu -19 294 1 257 233 0 0 chr10 35861861 35861921 -104454844 - L1ME3A LINE L1 -201 5969 5910 * 541 289 75 16 chr10 35861920 35862107 -104454658 + L1ME3A LINE L1 5963 6160 -10 535 154 100 9 chr10 35862227 35862337 -104454428 - MER96B DNA MER1_type? -23 394 275 461 181 123 26 chr10 35862228 35862383 -104454382 + MER96B DNA MER1_type? 25 194 -223 * 27 62 0 0 chr10 35863848 35863896 -104452869 + AT_rich Low_complexity Low_complexity 1 48 0 1041 233 0 23 chr10 35865536 35865751 -104451014 - MER63A DNA MER1_type 0 210 1 189 107 0 0 chr10 35867316 35867344 -104449421 + (A)n Simple_repeat Simple_repeat 1 28 0 180 0 0 0 chr10 35869722 35869742 -104447023 + (TG)n Simple_repeat Simple_repeat 2 21 0 216 0 0 0 chr10 35871512 35871536 -104445229 + (A)n Simple_repeat Simple_repeat 1 24 0 329 310 44 74 chr10 35872003 35872232 -104444533 + L1M2 LINE L1 1030 1251 -5598 32 26 0 0 chr10 35875661 35875700 -104441065 + AT_rich Low_complexity Low_complexity 1 39 0 1132 321 110 45 chr10 35875775 35876768 -104439997 - L2 LINE L2 -618 2696 1640 706 186 192 55 chr10 35877910 35877950 -104438815 + L1ME4a LINE L1 5789 5822 -299 2120 105 0 26 chr10 35877950 35878255 -104438510 + AluY SINE Alu 15 311 0 1493 157 33 74 chr10 35878265 35878564 -104438201 + AluJo SINE Alu 1 287 -25 191 61 30 0 chr10 35878567 35878600 -104438165 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 706 186 192 55 chr10 35878600 35878835 -104437930 + L1ME4a LINE L1 5830 6119 -2 200 255 0 20 chr10 35879123 35879174 -104437591 - MIR SINE MIR -57 205 156 1363 137 4 57 chr10 35879536 35879784 -104436981 + AluJo SINE Alu 76 310 -2 222 118 0 0 chr10 35880503 35880537 -104436228 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 2539 211 93 5 chr10 35881804 35882372 -104434393 - MLT1E3 LTR MaLR -5 619 2 1688 153 42 0 chr10 35883352 35883613 -104433152 + AluJb SINE Alu 4 275 -37 587 213 99 50 chr10 35883737 35883958 -104432807 - L1ME LINE L1 -672 5492 5261 266 159 14 43 chr10 35884020 35884089 -104432676 - L1ME LINE L1 -896 5250 5184 2375 96 3 0 chr10 35884143 35884446 -104432319 - AluSx SINE Alu -8 304 1 363 277 68 27 chr10 35884724 35884872 -104431893 + MIR SINE MIR 59 212 -50 2116 132 0 3 chr10 35885842 35886137 -104430628 - AluSg SINE Alu -13 297 4 396 226 83 15 chr10 35887797 35887930 -104428835 - MER103 DNA DNA -17 149 8 192 356 44 0 chr10 35888417 35888507 -104428258 - MIR SINE MIR -65 143 50 1741 122 37 24 chr10 35888653 35888981 -104427784 + AluSx SINE Alu 1 312 0 21 0 0 0 chr10 35890107 35890128 -104426637 + AT_rich Low_complexity Low_complexity 1 21 0 2018 156 6 3 chr10 35891383 35891698 -104425067 - 7SLRNA srpRNA srpRNA -4 316 1 23 0 0 0 chr10 35893445 35893468 -104423297 + AT_rich Low_complexity Low_complexity 1 23 0 278 262 43 116 chr10 35894874 35894990 -104421775 - MIR3 SINE MIR -23 185 83 1802 176 26 0 chr10 35894990 35895292 -104421473 - AluJb SINE Alu -2 310 1 278 262 43 116 chr10 35895292 35895339 -104421426 - MIR3 SINE MIR -125 83 34 196 308 17 108 chr10 35895772 35895811 -104420954 - L3b LINE CR1 -101 1482 1441 2235 99 7 0 chr10 35895811 35896095 -104420670 + AluSx SINE Alu 10 295 -17 196 308 17 108 chr10 35896095 35896175 -104420590 - L3b LINE CR1 -142 1441 1374 291 383 0 21 chr10 35896579 35896720 -104420045 - MIR3 SINE MIR -30 178 41 2313 83 7 3 chr10 35897432 35897732 -104419033 + AluSp SINE Alu 1 301 -12 449 195 23 0 chr10 35897862 35897949 -104418816 + MIR3 SINE MIR 89 177 -31 1811 170 3 3 chr10 35898522 35898816 -104417949 + AluJo SINE Alu 1 294 -18 1771 132 0 0 chr10 35899843 35900086 -104416679 + AluSx SINE Alu 1 243 -69 2278 112 0 3 chr10 35900500 35900804 -104415961 + AluSx SINE Alu 1 303 -9 339 316 101 0 chr10 35901742 35901881 -104414884 + MIR SINE MIR 36 188 -74 490 276 112 30 chr10 35902042 35902274 -104414491 - MIR SINE MIR -5 257 7 1796 148 0 24 chr10 35902597 35902895 -104413870 + AluJo SINE Alu 5 295 -17 622 91 10 20 chr10 35903646 35903745 -104413020 + MER4A LTR ERV1 1 98 -566 1849 101 186 80 chr10 35903745 35904110 -104412655 + MER4A LTR ERV1 261 664 0 189 175 0 0 chr10 35905094 35905134 -104411631 + GA-rich Low_complexity Low_complexity 2 41 0 219 358 41 41 chr10 35906881 35907004 -104409761 + L2 LINE L2 3123 3245 -27 241 312 13 13 chr10 35907867 35907944 -104408821 - L3 LINE CR1 -87 1490 1414 273 261 0 15 chr10 35908431 35908496 -104408269 - L3 LINE CR1 -231 1346 1283 181 317 37 73 chr10 35908652 35908734 -104408031 + MIR3 SINE MIR 78 156 -52 2340 94 7 0 chr10 35908862 35909161 -104407604 - AluSg SINE Alu -9 301 1 279 0 0 0 chr10 35909452 35909483 -104407282 + (TG)n Simple_repeat Simple_repeat 1 31 0 1230 225 9 0 chr10 35910336 35910558 -104406207 + MER58A DNA MER1_type 1 224 0 525 269 26 52 chr10 35910663 35910856 -104405909 + L1ME LINE L1 5563 5750 -371 3815 138 14 4 chr10 35910909 35911469 -104405296 + L1PA15 LINE L1 5587 6152 -13 242 56 28 0 chr10 35911470 35911506 -104405259 + (TA)n Simple_repeat Simple_repeat 1 37 0 2083 128 0 7 chr10 35911589 35911885 -104404880 - AluSx SINE Alu -18 294 1 21 0 0 0 chr10 35911948 35911969 -104404796 + AT_rich Low_complexity Low_complexity 1 21 0 33 43 0 0 chr10 35912139 35912186 -104404579 + AT_rich Low_complexity Low_complexity 1 47 0 266 310 152 0 chr10 35912214 35912385 -104404380 - MER117 DNA MER1_type 0 197 1 2561 37 0 7 chr10 35913047 35913345 -104403420 - AluY SINE Alu -15 296 1 2416 96 0 0 chr10 35913345 35913647 -104403118 - AluSx SINE Alu -10 302 1 389 197 0 134 chr10 35914570 35914712 -104402053 + L2 LINE L2 3191 3313 0 27 0 0 0 chr10 35915247 35915274 -104401491 + AT_rich Low_complexity Low_complexity 1 27 0 533 118 24 0 chr10 35916522 35916607 -104400158 + L1MA3 LINE L1 6218 6304 -1 264 300 70 0 chr10 35916713 35916813 -104399952 - MIR3 SINE MIR -54 154 48 512 211 6 25 chr10 35917031 35917192 -104399573 + CT-rich Low_complexity Low_complexity 3 160 0 1478 193 36 11 chr10 35917194 35917474 -104399291 - AluJo SINE Alu -24 288 2 223 163 0 0 chr10 35920052 35920095 -104396670 + GA-rich Low_complexity Low_complexity 2 44 0 2253 91 3 23 chr10 35972453 35972760 -104344005 + AluY SINE Alu 1 301 -10 1970 142 0 35 chr10 35973991 35974302 -104342463 + AluSx SINE Alu 1 300 -12 25 0 0 0 chr10 35975424 35975449 -104341316 + AT_rich Low_complexity Low_complexity 1 25 0 2017 221 71 44 chr10 35977673 35978239 -104338526 + MLT1G LTR MaLR 10 590 0 2375 96 0 0 chr10 35978909 35979211 -104337554 + AluSx SINE Alu 1 302 -10 196 28 83 0 chr10 35979288 35979324 -104337441 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 227 154 0 0 chr10 35981548 35981587 -104335178 + L2 LINE L2 3261 3299 -14 207 100 0 0 chr10 35981881 35981911 -104334854 + (CA)n Simple_repeat Simple_repeat 2 31 0 898 229 85 38 chr10 35984696 35985035 -104331730 + MLT1E LTR MaLR 305 593 0 264 358 91 12 chr10 35985871 35986036 -104330729 - L3b LINE CR1 -23 1560 1383 261 316 61 9 chr10 35986106 35986220 -104330545 - L3b LINE CR1 -362 1221 1102 1930 113 20 40 chr10 35986560 35986862 -104329903 + AluSc SINE Alu 1 296 -13 1141 155 120 43 chr10 35986931 35987189 -104329576 - AluJo SINE Alu -21 291 14 291 114 0 0 chr10 35987526 35987570 -104329195 + (TG)n Simple_repeat Simple_repeat 2 45 0 1582 287 126 42 chr10 35988190 35989226 -104327539 + L2 LINE L2 1734 2855 -459 251 269 0 15 chr10 35989331 35989398 -104327367 + MLT1I LTR MaLR 344 409 0 337 346 28 33 chr10 35989413 35989595 -104327170 - L2 LINE L2 0 3313 3133 696 237 178 39 chr10 35990292 35990702 -104326063 - L1ME3A LINE L1 -49 6121 5655 368 274 17 46 chr10 35990750 35990924 -104325841 - L1ME3A LINE L1 -678 5486 5318 278 308 30 56 chr10 35990953 35991151 -104325614 + HAL1 LINE L1 1482 1674 -833 463 296 100 27 chr10 35991393 35991882 -104324883 + L1M4 LINE L1 4426 4950 -1196 989 173 0 22 chr10 35991991 35992170 -104324595 - FRAM SINE Alu -8 168 1 1714 167 11 3 chr10 35992174 35992631 -104324134 - AluJo SINE Alu 0 459 1 364 339 46 0 chr10 35992636 35992766 -104323999 - L2 LINE L2 -541 2773 2638 928 251 99 94 chr10 35992783 35993284 -104323481 + HAL1b LINE L1 392 889 -459 2228 107 0 7 chr10 35993284 35993592 -104323173 + AluSc SINE Alu 1 306 -3 928 251 99 94 chr10 35993592 35993611 -104323154 + HAL1b LINE L1 889 906 -442 2363 105 0 0 chr10 35993611 35993924 -104322841 + AluSq SINE Alu 1 313 0 928 251 99 94 chr10 35993924 35994118 -104322647 + HAL1b LINE L1 906 1111 -237 234 233 44 56 chr10 35994146 35994236 -104322529 - L1MC4 LINE L1 -1340 6702 6614 260 247 39 0 chr10 35994433 35994510 -104322255 + MIR SINE MIR 175 254 -8 1427 203 73 60 chr10 35994872 35995257 -104321508 - MLT1B LTR MaLR 0 390 1 1760 148 7 36 chr10 35995324 35995627 -104321138 - AluJo SINE Alu -18 294 1 2089 146 0 0 chr10 35995633 35995934 -104320831 - AluSq SINE Alu -12 301 1 2106 113 0 7 chr10 35996433 35996724 -104320041 + AluSx SINE Alu 1 289 -23 21 57 0 0 chr10 35997283 35997318 -104319447 + AT_rich Low_complexity Low_complexity 1 35 0 259 216 27 0 chr10 35998648 35998722 -104318043 + (TA)n Simple_repeat Simple_repeat 1 76 0 34 79 0 0 chr10 35998779 35998855 -104317910 + AT_rich Low_complexity Low_complexity 1 76 0 363 317 56 21 chr10 36000196 36000338 -104316427 - MIR3 SINE MIR -61 147 1 2183 133 0 3 chr10 36000485 36000794 -104315971 + AluSx SINE Alu 1 308 -4 211 263 35 0 chr10 36000924 36000981 -104315784 + (CATATA)n Simple_repeat Simple_repeat 1 59 0 252 0 0 0 chr10 36002440 36002468 -104314297 + (T)n Simple_repeat Simple_repeat 1 28 0 225 162 44 0 chr10 36003251 36003319 -104313446 + (TA)n Simple_repeat Simple_repeat 1 71 0 952 199 256 59 chr10 36004201 36004258 -104312507 + L1MEc LINE L1 37 81 -6315 2014 189 25 17 chr10 36004258 36004618 -104312147 - MLT1A1 LTR MaLR 0 365 3 952 199 256 59 chr10 36004618 36004824 -104311941 + L1MEc LINE L1 81 245 -6151 285 29 0 0 chr10 36004824 36004858 -104311907 + (GA)n Simple_repeat Simple_repeat 1 34 0 952 199 256 59 chr10 36004858 36004984 -104311781 + L1MEc LINE L1 245 504 -5892 828 222 41 110 chr10 36004974 36005393 -104311372 + L1MEc LINE L1 2113 2502 -3894 * 734 239 17 0 chr10 36005393 36005569 -104311196 + L1MEc LINE L1 2764 2942 -3273 377 244 33 0 chr10 36005568 36005658 -104311107 + L1MEc LINE L1 3532 3624 -2591 * 1214 339 121 36 chr10 36007681 36008185 -104308580 - L2 LINE L2 -72 3200 2740 1735 162 10 10 chr10 36008185 36008475 -104308290 + AluJo SINE Alu 1 290 -22 1214 339 121 36 chr10 36008475 36009343 -104307422 - L2 LINE L2 -532 2740 1720 470 162 5 49 chr10 36010092 36010277 -104306488 + (TG)n Simple_repeat Simple_repeat 2 178 0 260 210 25 49 chr10 36010279 36010360 -104306405 + (TATATG)n Simple_repeat Simple_repeat 3 81 0 557 135 13 46 chr10 36010360 36010601 -104306164 + (TG)n Simple_repeat Simple_repeat 1 232 0 225 0 0 0 chr10 36011703 36011728 -104305037 + (TG)n Simple_repeat Simple_repeat 2 26 0 183 222 0 0 chr10 36014335 36014380 -104302385 + (TG)n Simple_repeat Simple_repeat 2 46 0 207 0 0 0 chr10 36014995 36015018 -104301747 + (TG)n Simple_repeat Simple_repeat 1 23 0 183 80 0 0 chr10 36018098 36018123 -104298642 + (C)n Simple_repeat Simple_repeat 1 25 0 207 182 0 0 chr10 36018292 36018336 -104298429 + (TCTCTG)n Simple_repeat Simple_repeat 6 49 0 209 267 0 0 chr10 36019111 36019156 -104297609 + (CGTG)n Simple_repeat Simple_repeat 4 48 0 332 380 0 0 chr10 36023895 36024024 -104292741 + (CGG)n Simple_repeat Simple_repeat 1 129 0 477 0 0 0 chr10 36025039 36025092 -104291673 + (CA)n Simple_repeat Simple_repeat 2 54 0 206 62 31 0 chr10 36025898 36025930 -104290835 + (TG)n Simple_repeat Simple_repeat 2 34 0 366 115 0 0 chr10 36026107 36026168 -104290597 + (TG)n Simple_repeat Simple_repeat 1 61 0 195 139 0 0 chr10 36033148 36033184 -104283581 + (CCG)n Simple_repeat Simple_repeat 3 38 0 249 281 16 33 chr10 36033511 36033632 -104283133 + (CGG)n Simple_repeat Simple_repeat 1 119 0 249 159 0 0 chr10 36034607 36034651 -104282114 + (TG)n Simple_repeat Simple_repeat 2 45 0 216 0 0 0 chr10 36035400 36035424 -104281341 + (CA)n Simple_repeat Simple_repeat 1 24 0 477 0 0 0 chr10 36040614 36040667 -104276098 + (TG)n Simple_repeat Simple_repeat 1 53 0 183 167 0 0 chr10 36041021 36041063 -104275702 + CT-rich Low_complexity Low_complexity 1 42 0 207 100 0 0 chr10 36041415 36041445 -104275320 + (TCCC)n Simple_repeat Simple_repeat 2 31 0 426 85 0 0 chr10 36042987 36043046 -104273719 + (TG)n Simple_repeat Simple_repeat 1 59 0 246 174 0 0 chr10 36043774 36043820 -104272945 + (CA)n Simple_repeat Simple_repeat 1 46 0 396 71 0 0 chr10 36045278 36045334 -104271431 + (TG)n Simple_repeat Simple_repeat 1 56 0 303 327 106 72 chr10 36045880 36046296 -104270469 - L1 LINE L1 -1498 5350 4921 726 69 46 0 chr10 36047463 36047594 -104269171 + (TCCA)n Simple_repeat Simple_repeat 1 137 0 5050 133 11 0 chr10 36048732 36049599 -104267166 - L1PA16 LINE L1 -9 6157 5281 1715 162 4 0 chr10 36049601 36049867 -104266898 - AluJo SINE Alu -45 267 1 2448 90 0 0 chr10 36050185 36050497 -104266268 - AluSx SINE Alu 0 312 1 23 33 0 0 chr10 36051298 36051328 -104265437 + AT_rich Low_complexity Low_complexity 1 30 0 1933 116 0 0 chr10 36052537 36052812 -104263953 - AluSq SINE Alu 0 313 39 3314 77 27 0 chr10 36052857 36053298 -104263467 + L1PA10 LINE L1 5705 6157 -11 1716 185 0 7 chr10 36053853 36054155 -104262610 - AluJo SINE Alu -12 300 1 323 306 59 43 chr10 36054190 36054582 -104262183 - L1MEc LINE L1 -3639 3209 2812 23 33 0 0 chr10 36054714 36054744 -104262021 + AT_rich Low_complexity Low_complexity 1 30 0 234 0 0 0 chr10 36054888 36054914 -104261851 + (A)n Simple_repeat Simple_repeat 1 26 0 415 308 227 10 chr10 36054933 36055275 -104261490 - L1MEc LINE L1 -846 2363 2028 245 283 54 0 chr10 36055302 36055394 -104261371 - L1MEc LINE L1 -4956 1882 1786 649 23 23 0 chr10 36055394 36055481 -104261284 + (TAGA)n Simple_repeat Simple_repeat 4 92 0 1253 196 92 0 chr10 36055484 36055734 -104261031 - AluJo SINE Alu -31 281 9 503 350 110 55 chr10 36055759 36056213 -104260552 - L1 LINE L1 -4778 2071 1593 741 190 0 15 chr10 36056812 36056949 -104259816 + AluJo SINE Alu 1 135 -177 2271 113 18 82 chr10 36057378 36057767 -104258998 - THE1B LTR MaLR 0 364 1 2312 181 73 23 chr10 36059301 36059782 -104256983 + MLT1D LTR MaLR 1 505 0 226 369 19 0 chr10 36059829 36059932 -104256833 - L3 LINE CR1 -6 1571 1467 210 319 42 0 chr10 36060079 36060151 -104256614 + MIR SINE MIR 115 189 -73 431 338 36 18 chr10 36060209 36060434 -104256331 - L3 LINE CR1 -203 1374 1146 302 196 0 18 chr10 36060733 36060789 -104255976 - L1MC4 LINE L1 -1339 6703 6649 1387 165 132 0 chr10 36060789 36061031 -104255734 + AluJo SINE Alu 1 274 -38 216 0 0 0 chr10 36061054 36061078 -104255687 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 212 363 94 44 chr10 36061353 36061714 -104255051 + L2 LINE L2 2930 3308 -5 1927 132 11 0 chr10 36062408 36062688 -104254077 + AluSx SINE Alu 7 289 -23 3571 219 29 8 chr10 36063544 36064419 -104252346 + L1MD2 LINE L1 5305 6197 -162 1624 152 16 4 chr10 36064433 36064690 -104252075 + AluJb SINE Alu 23 282 -30 242 56 28 0 chr10 36064690 36064726 -104252039 + (TC)n Simple_repeat Simple_repeat 2 38 0 255 239 28 21 chr10 36064727 36064869 -104251896 + (TA)n Simple_repeat Simple_repeat 2 144 0 197 125 0 21 chr10 36064899 36064947 -104251818 + (TA)n Simple_repeat Simple_repeat 1 47 0 597 186 83 0 chr10 36064950 36065095 -104251670 + L1MD2 LINE L1 6193 6349 -10 917 236 17 43 chr10 36065133 36065399 -104251366 + MLT2B1 LTR ERVL 177 476 -44 949 266 73 40 chr10 36065438 36065810 -104250955 + MLT1H LTR MaLR 128 511 -38 1403 200 70 0 chr10 36066072 36066372 -104250393 + L1MB7 LINE L1 5864 6184 0 375 191 67 48 chr10 36066464 36066569 -104250196 + MLT1H-int LTR MaLR 433 539 -832 285 225 17 146 chr10 36067247 36067425 -104249340 + MLT1H-int LTR MaLR 1375 1529 -206 1572 252 104 9 chr10 36067605 36068066 -104248699 + MLT1H LTR MaLR 45 549 0 823 267 51 0 chr10 36068066 36068302 -104248463 - MIR SINE MIR -4 258 11 866 286 136 13 chr10 36068739 36069130 -104247635 - MLT1J LTR MaLR -2 509 71 1754 113 8 0 chr10 36069143 36069383 -104247382 + AluSc SINE Alu 64 305 -4 910 150 60 0 chr10 36069402 36069535 -104247230 + AluJo SINE Alu 11 151 -161 322 355 16 16 chr10 36069561 36069685 -104247080 - MIR SINE MIR -118 144 21 1744 257 93 27 chr10 36070470 36071300 -104245465 + MER45C DNA AcHobo 2 940 -13 471 157 0 0 chr10 36072420 36072509 -104244256 + (CA)n Simple_repeat Simple_repeat 2 90 0 281 132 0 19 chr10 36072977 36073030 -104243735 + (TG)n Simple_repeat Simple_repeat 2 53 0 213 94 0 0 chr10 36073480 36073512 -104243253 + (CA)n Simple_repeat Simple_repeat 1 32 0 225 0 0 0 chr10 36073916 36073941 -104242824 + (CA)n Simple_repeat Simple_repeat 1 25 0 189 121 0 0 chr10 36073945 36073978 -104242787 + (CAGAGA)n Simple_repeat Simple_repeat 4 36 0 183 80 0 0 chr10 36074021 36074046 -104242719 + (CA)n Simple_repeat Simple_repeat 2 26 0 285 29 0 0 chr10 36074112 36074146 -104242619 + (TG)n Simple_repeat Simple_repeat 2 35 0 252 86 0 0 chr10 36074271 36074306 -104242459 + (TG)n Simple_repeat Simple_repeat 2 36 0 417 39 0 0 chr10 36074500 36074551 -104242214 + (TG)n Simple_repeat Simple_repeat 2 52 0 209 286 0 0 chr10 36074650 36074699 -104242066 + (CA)n Simple_repeat Simple_repeat 2 50 0 207 280 0 0 chr10 36075129 36075179 -104241586 + (CA)n Simple_repeat Simple_repeat 1 50 0 216 97 0 0 chr10 36076206 36076237 -104240528 + (TA)n Simple_repeat Simple_repeat 2 32 0 285 98 0 0 chr10 36076252 36076293 -104240472 + (GGGAGA)n Simple_repeat Simple_repeat 5 45 0 411 107 0 0 chr10 36076423 36076498 -104240267 + (TG)n Simple_repeat Simple_repeat 1 75 0 25 0 0 0 chr10 36077015 36077040 -104239725 + GC_rich Low_complexity Low_complexity 1 25 0 573 175 33 109 chr10 36077710 36077893 -104238872 - L1M4 LINE L1 -3361 2785 2617 280 260 121 56 chr10 36077953 36078129 -104238636 - L1ME LINE L1 -294 5827 5631 1854 164 91 30 chr10 36078129 36078298 -104238467 + MSTD LTR MaLR 1 158 -238 1856 167 0 28 chr10 36078298 36078615 -104238150 + AluJo SINE Alu 1 308 -4 1854 164 91 30 chr10 36078615 36078818 -104237947 + MSTD LTR MaLR 158 396 0 280 260 121 56 chr10 36078818 36078872 -104237893 - L1ME LINE L1 -490 5631 5582 26 0 0 0 chr10 36080186 36080212 -104236553 + AT_rich Low_complexity Low_complexity 1 26 0 1654 180 31 10 chr10 36080716 36081005 -104235760 + AluJo SINE Alu 5 299 -13 537 235 67 0 chr10 36082441 36082590 -104234175 - MER103 DNA DNA -7 159 1 42 0 0 0 chr10 36083033 36083075 -104233690 + AT_rich Low_complexity Low_complexity 1 42 0 1780 130 20 4 chr10 36083079 36083333 -104233432 - AluSx SINE Alu -54 258 1 28 29 0 0 chr10 36083443 36083478 -104233287 + AT_rich Low_complexity Low_complexity 1 35 0 329 311 91 36 chr10 36083496 36083715 -104233050 - MIR SINE MIR -3 259 29 183 42 0 0 chr10 36084177 36084201 -104232564 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 295 277 0 24 chr10 36084836 36084919 -104231846 + MIR SINE MIR 18 98 -110 221 313 31 0 chr10 36085927 36085991 -104230774 + L2 LINE L2 3201 3266 -6 530 257 119 15 chr10 36087052 36087254 -104229511 - L2 LINE L2 0 3313 3091 2988 157 13 23 chr10 36087286 36087896 -104228869 + pTR5 LTR ERV1 742 1345 -1093 3839 132 22 136 chr10 36087911 36088839 -104227926 + LTR12 LTR ERV1 5 826 0 2221 96 3 3 chr10 36089015 36089308 -104227457 - AluY SINE Alu -18 293 1 350 314 68 10 chr10 36089509 36089637 -104227128 - L2 LINE L2 -494 2820 2674 2122 141 0 0 chr10 36089637 36089936 -104226829 + AluJo SINE Alu 1 299 -13 350 314 68 10 chr10 36089936 36090014 -104226751 - L2 LINE L2 -640 2674 2602 181 217 22 0 chr10 36090790 36090836 -104225929 - MIR SINE MIR -109 153 107 301 284 0 49 chr10 36091086 36091188 -104225577 + (CA)n Simple_repeat Simple_repeat 1 97 0 3081 126 67 13 chr10 36091238 36091777 -104224988 - L1MA2 LINE L1 0 6304 5737 287 328 55 8 chr10 36091867 36091995 -104224770 + L3b LINE CR1 1162 1295 -288 464 294 45 40 chr10 36093375 36093576 -104223189 - MIR SINE MIR -51 211 10 22 0 0 0 chr10 36093893 36093915 -104222850 + AT_rich Low_complexity Low_complexity 1 22 0 225 98 0 98 chr10 36094065 36094106 -104222659 - U2 snRNA snRNA -150 38 2 363 304 44 44 chr10 36095327 36095508 -104221257 - MIR SINE MIR -51 211 31 2562 39 7 13 chr10 36095513 36095822 -104220943 - AluY SINE Alu -4 307 1 696 175 133 0 chr10 36095824 36095967 -104220798 - FRAM SINE Alu -15 161 1 2543 57 0 0 chr10 36095979 36096276 -104220489 - AluY SINE Alu -14 297 1 494 56 127 0 chr10 36097114 36097185 -104219580 + MADE1 DNA Mariner 1 80 0 1903 136 44 0 chr10 36098668 36098941 -104217824 - AluSx SINE Alu -27 285 1 4671 119 116 132 chr10 36099184 36100468 -104216297 - pTR5 LTR ERV1 -143 2295 741 609 134 62 18 chr10 36100688 36100800 -104215965 + THE1C LTR MaLR 1 117 -258 1699 191 0 7 chr10 36101395 36101876 -104214889 - AluJo SINE Alu 0 312 1 2291 121 3 0 chr10 36105341 36105648 -104211117 + AluSq SINE Alu 1 308 -5 201 314 58 76 chr10 36106796 36106968 -104209797 - L2 LINE L2 -179 3093 2925 256 274 48 12 chr10 36107075 36107159 -104209606 - L2 LINE L2 -45 3268 3182 2258 92 0 41 chr10 36107225 36107542 -104209223 + AluSg SINE Alu 1 304 -6 469 281 86 41 chr10 36107679 36107900 -104208865 - MIR SINE MIR -10 252 22 215 250 0 18 chr10 36107920 36107976 -104208789 + MER5B DNA MER1_type 72 126 -52 725 200 0 22 chr10 36107989 36108124 -104208641 - FLAM_C SINE Alu 0 133 2 264 127 0 0 chr10 36108131 36108186 -104208579 + (TTTAG)n Simple_repeat Simple_repeat 1 55 0 1946 157 0 0 chr10 36108186 36108472 -104208293 - AluJb SINE Alu -26 286 1 2592 61 0 10 chr10 36110297 36110610 -104206155 + AluY SINE Alu 1 310 -1 208 322 73 41 chr10 36111074 36111203 -104205562 + MIR SINE MIR 9 132 -130 2170 110 0 0 chr10 36111203 36111484 -104205281 + AluSx SINE Alu 23 303 -9 208 322 73 41 chr10 36111484 36111599 -104205166 + MIR SINE MIR 132 261 -1 1991 153 46 100 chr10 36115081 36115152 -104201613 - Tigger2a DNA MER2_type -2274 434 361 1781 171 3 10 chr10 36115152 36115450 -104201315 - AluSx SINE Alu -16 296 1 1991 153 46 100 chr10 36115450 36115837 -104200928 - Tigger2a DNA MER2_type -2347 361 1 243 341 0 0 chr10 36116092 36116180 -104200585 - MIR SINE MIR -2 260 173 233 303 8 42 chr10 36116179 36116298 -104200467 + MIR SINE MIR 23 137 -71 * 215 324 10 29 chr10 36116459 36116561 -104200204 - L3b LINE CR1 -382 1201 1102 1609 226 45 59 chr10 36120860 36121067 -104195698 + MLT1D LTR MaLR 1 209 -296 1298 171 140 8 chr10 36121067 36121324 -104195441 + AluSg1 SINE Alu 1 291 -18 1609 226 45 59 chr10 36121324 36121624 -104195141 + MLT1D LTR MaLR 209 501 -4 15356 137 16 7 chr10 36122495 36124886 -104191879 - Tigger1 DNA MER2_type -5 2413 1 2634 228 88 50 chr10 36124961 36125758 -104191007 - MER21B LTR ERV1 -36 827 1 599 239 77 43 chr10 36126356 36126590 -104190175 - MIR SINE MIR 0 262 21 2113 105 6 53 chr10 36127038 36127361 -104189404 - AluSx SINE Alu -4 308 1 222 228 18 18 chr10 36127399 36127456 -104189309 + CT-rich Low_complexity Low_complexity 4 60 0 1731 179 7 14 chr10 36127861 36128152 -104188613 + AluJb SINE Alu 1 289 -23 1753 121 0 16 chr10 36129972 36130229 -104186536 - AluSx SINE Alu -8 304 52 390 121 0 0 chr10 36130237 36130303 -104186462 + (T)n Simple_repeat Simple_repeat 1 66 0 43620 33 21 2 chr10 36130305 36136343 -104180422 - L1HS LINE L1 0 6155 2 298 313 17 43 chr10 36136716 36136831 -104179934 - MIR SINE MIR -142 120 9 2098 107 4 0 chr10 36136988 36137312 -104179453 - AluSx SINE Alu 0 325 1 258 258 91 0 chr10 36137587 36137653 -104179112 - MIR3 SINE MIR -51 157 86 1972 154 0 0 chr10 36137836 36138129 -104178636 + AluSx SINE Alu 1 293 -19 198 118 0 0 chr10 36138133 36138167 -104178598 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 550 339 49 5 chr10 36138219 36138443 -104178322 - L3 LINE CR1 -278 1299 1066 262 90 15 104 chr10 36138785 36138852 -104177913 + HSMAR1 DNA Mariner 1 61 -1226 * 347 111 16 63 chr10 36138848 36138911 -104177854 - MADE1 DNA Mariner -20 60 1 228 274 41 0 chr10 36139651 36139724 -104177041 - MIR3 SINE MIR -6 202 127 324 316 89 32 chr10 36139919 36140109 -104176656 + MIR3 SINE MIR 1 201 -7 1043 178 0 6 chr10 36140387 36140567 -104176198 - FRAM SINE Alu -3 173 1 2009 165 0 0 chr10 36141945 36142254 -104174511 + AluSx SINE Alu 1 309 -3 467 277 57 0 chr10 36142256 36142397 -104174368 - MIR SINE MIR -13 249 101 183 250 70 70 chr10 36142477 36142577 -104174188 + MIR3 SINE MIR 109 208 0 2095 109 3 0 chr10 36143349 36143633 -104173132 + AluSx SINE Alu 14 298 -14 1996 230 67 66 chr10 36144863 36144922 -104171843 + L1MC4 LINE L1 7343 7400 -642 2179 127 0 3 chr10 36144922 36145222 -104171543 + AluSx SINE Alu 1 299 -13 1996 230 67 66 chr10 36145222 36145861 -104170904 + L1MC4 LINE L1 7400 8042 0 1345 139 15 157 chr10 36145959 36146283 -104170482 + AluJo SINE Alu 16 293 -19 1752 228 94 41 chr10 36147168 36147944 -104168821 + L1ME1 LINE L1 792 1592 -4814 3198 234 73 28 chr10 36147983 36149762 -104167003 + L1ME1 LINE L1 4434 6402 -24 183 80 0 0 chr10 36151128 36151153 -104165612 + (GA)n Simple_repeat Simple_repeat 1 25 0 274 269 59 50 chr10 36151252 36151371 -104165394 + MIR SINE MIR 49 169 -39 506 274 102 21 chr10 36152417 36152603 -104164162 + MER63A DNA MER1_type 1 201 -9 676 108 0 18 chr10 36152660 36152771 -104163994 + LTR7 LTR ERV1 296 404 -46 360 0 0 0 chr10 36152771 36152811 -104163954 + (CA)n Simple_repeat Simple_repeat 1 40 0 2286 107 0 0 chr10 36154341 36154639 -104162126 - AluSx SINE Alu -14 298 1 1610 127 59 0 chr10 36154669 36154905 -104161860 - L1PA10 LINE L1 -11 6157 5908 297 0 0 0 chr10 36157053 36157086 -104159679 + (TG)n Simple_repeat Simple_repeat 2 34 0 339 113 0 0 chr10 36157900 36157953 -104158812 + (GGGA)n Simple_repeat Simple_repeat 4 56 0 295 228 8 36 chr10 36158489 36158591 -104158174 + L1MDb LINE L1 2397 2521 -3907 2141 151 45 19 chr10 36158625 36159003 -104157762 + MER61D LTR ERV1 114 501 0 3537 250 72 43 chr10 36159003 36160291 -104156474 + L1MDb LINE L1 2492 3741 -2665 1975 136 0 4 chr10 36160291 36160571 -104156194 + AluSx SINE Alu 1 279 -33 306 0 0 0 chr10 36160571 36160605 -104156160 + (CA)n Simple_repeat Simple_repeat 1 34 0 3537 250 72 43 chr10 36160605 36160885 -104155880 + L1MDb LINE L1 3740 4107 -2299 357 244 42 74 chr10 36160896 36161113 -104155652 + L1MCc LINE L1 20 229 -6194 232 322 52 17 chr10 36161597 36161712 -104155053 + L1MCc LINE L1 1042 1160 -5262 2271 216 85 57 chr10 36161764 36161885 -104154880 + L1MCc LINE L1 1036 1152 -5789 4488 176 18 8 chr10 36161885 36162605 -104154160 - MER44D DNA MER2_type -3 602 4 2271 216 85 57 chr10 36162605 36163684 -104153081 + L1MCc LINE L1 1152 2786 -4155 1440 156 4 13 chr10 36163684 36163922 -104152843 + AluSg/x SINE Alu 66 301 -9 428 193 126 15 chr10 36163936 36164071 -104152694 + L1MEc LINE L1 1762 1911 -4485 520 221 89 30 chr10 36164086 36164357 -104152408 + L1MEc LINE L1 1998 2284 -4112 260 226 97 113 chr10 36164464 36164650 -104152115 + L1ME1 LINE L1 5881 6063 -103 229 262 60 0 chr10 36164680 36164764 -104152001 + L1MC4 LINE L1 6615 6703 -1339 3478 149 13 6 chr10 36167187 36167710 -104149055 - MER1A DNA MER1_type 0 527 1 248 319 0 0 chr10 36167733 36167805 -104148960 - MIR SINE MIR -39 223 152 265 359 17 25 chr10 36168244 36168423 -104148342 + MIR SINE MIR 20 195 -67 204 240 0 40 chr10 36170275 36170325 -104146440 + C-rich Low_complexity Low_complexity 3 50 0 1001 39 0 23 chr10 36170595 36170723 -104146042 - L1PA13 LINE L1 0 6163 6039 381 145 181 0 chr10 36170723 36170806 -104145959 + MER4A LTR ERV1 1 98 -566 1655 150 169 68 chr10 36170806 36171173 -104145592 + MER4A LTR ERV1 261 664 0 1415 76 5 5 chr10 36171173 36171371 -104145394 - L1PA13 LINE L1 -121 6042 5845 451 305 147 20 chr10 36171473 36171670 -104145095 + MIR SINE MIR 15 236 -26 1619 206 78 9 chr10 36171697 36172018 -104144747 - MER61A LTR ERV1 0 343 1 2951 120 37 76 chr10 36172317 36172859 -104143906 + LTR26B LTR ERV1 11 531 0 1504 199 33 23 chr10 36174943 36175057 -104141708 + AluJo SINE Alu 1 112 -200 2577 165 19 14 chr10 36175057 36175481 -104141284 + MSTB LTR MaLR 1 426 0 1504 199 33 23 chr10 36175481 36175673 -104141092 + AluJo SINE Alu 112 310 -2 21 57 0 0 chr10 36177699 36177734 -104139031 + AT_rich Low_complexity Low_complexity 1 35 0 1614 166 0 56 chr10 36177764 36178066 -104138699 + AluJo SINE Alu 1 285 -27 2185 111 3 0 chr10 36178160 36178457 -104138308 + AluSx SINE Alu 1 298 -14 1879 238 67 65 chr10 36179687 36179746 -104137019 + L1MC4 LINE L1 7343 7400 -642 2179 127 0 3 chr10 36179746 36180046 -104136719 + AluSx SINE Alu 1 299 -13 1879 238 67 65 chr10 36180046 36180684 -104136081 + L1MC4 LINE L1 7400 8042 0 1333 142 16 155 chr10 36180782 36181105 -104135660 + AluJo SINE Alu 16 293 -19 1752 228 94 41 chr10 36181990 36182766 -104133999 + L1ME1 LINE L1 792 1592 -4814 3199 234 73 28 chr10 36182805 36184583 -104132182 + L1ME1 LINE L1 4434 6402 -24 183 80 0 0 chr10 36185949 36185974 -104130791 + (GA)n Simple_repeat Simple_repeat 1 25 0 274 269 59 50 chr10 36186073 36186192 -104130573 + MIR SINE MIR 49 169 -39 506 232 125 0 chr10 36187237 36187349 -104129416 + MER63 DNA MER1_type 1 752 -310 676 108 0 18 chr10 36187480 36187591 -104129174 + LTR7 LTR ERV1 296 404 -46 360 0 0 0 chr10 36187591 36187631 -104129134 + (CA)n Simple_repeat Simple_repeat 1 40 0 2286 107 0 0 chr10 36189161 36189459 -104127306 - AluSx SINE Alu -14 298 1 1610 127 59 0 chr10 36189489 36189725 -104127040 - L1PA10 LINE L1 -11 6157 5908 657 246 36 48 chr10 36190558 36190806 -104125959 + MSTB LTR MaLR 181 425 -1 835 202 53 11 chr10 36190813 36191001 -104125764 + AluJo SINE Alu 115 310 -2 2379 94 3 0 chr10 36192886 36193195 -104123570 - AluSp SINE Alu -3 310 1 25 0 0 0 chr10 36194730 36194755 -104122010 + AT_rich Low_complexity Low_complexity 1 25 0 469 252 0 24 chr10 36194811 36194970 -104121795 - MIR SINE MIR -61 147 25 219 282 77 0 chr10 36195039 36195117 -104121648 - MIR SINE MIR -106 102 19 2232 109 0 13 chr10 36198752 36199055 -104117710 + AluSq SINE Alu 1 299 -14 208 329 38 13 chr10 36199075 36199154 -104117611 - L2 LINE L2 0 3272 3192 1960 139 0 14 chr10 36199479 36199774 -104116991 + AluJb SINE Alu 1 291 -21 400 129 58 6 chr10 36199791 36199962 -104116803 + (TA)n Simple_repeat Simple_repeat 1 180 0 415 285 102 75 chr10 36200114 36200419 -104116346 + L1ME LINE L1 5354 5666 -455 28 48 0 0 chr10 36201202 36201244 -104115521 + AT_rich Low_complexity Low_complexity 1 42 0 2318 99 0 0 chr10 36201567 36201898 -104114867 - AluSx SINE Alu 0 331 1 1932 142 26 0 chr10 36202774 36203076 -104113689 + AluSx SINE Alu 1 310 -2 1320 158 0 0 chr10 36203113 36203315 -104113450 + AluSg/x SINE Alu 100 301 -11 2135 131 0 0 chr10 36204253 36204558 -104112207 + AluSg SINE Alu 2 306 -4 229 218 0 18 chr10 36205186 36205241 -104111524 + MER5A DNA MER1_type 111 164 -25 1806 160 0 7 chr10 36205799 36206099 -104110666 - AluJb SINE Alu -4 308 11 1839 10 0 0 chr10 36206133 36206330 -104110435 - L1PA3 LINE L1 0 6155 5959 4260 118 13 22 chr10 36207189 36207471 -104109294 + L1PB3 LINE L1 5516 5799 -355 240 35 0 0 chr10 36207471 36207500 -104109265 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 249 33 0 0 chr10 36207499 36207529 -104109236 + (TA)n Simple_repeat Simple_repeat 1 30 0 4260 118 13 22 chr10 36207500 36207528 -104109237 + L1PB3 LINE L1 5799 5826 -328 300 27 0 0 chr10 36207528 36207565 -104109200 + (CA)n Simple_repeat Simple_repeat 2 38 0 4260 118 13 22 chr10 36207565 36207917 -104108848 + L1PB3 LINE L1 5826 6144 -10 248 250 26 0 chr10 36208494 36208570 -104108195 - MIR SINE MIR -10 252 175 2248 102 3 0 chr10 36209100 36209393 -104107372 + AluSq SINE Alu 1 294 -19 204 327 40 20 chr10 36209567 36209668 -104107097 + MIR SINE MIR 159 261 -1 492 249 53 21 chr10 36209796 36209985 -104106780 + L1ME3A LINE L1 5084 5278 -868 1234 218 136 12 chr10 36209988 36210319 -104106446 - MLT1F1 LTR MaLR -8 559 188 710 79 55 12 chr10 36210321 36210485 -104106280 + (TAGA)n Simple_repeat Simple_repeat 2 172 0 1885 134 16 32 chr10 36210587 36210900 -104105865 + AluSx SINE Alu 5 312 0 313 255 38 19 chr10 36210904 36211010 -104105755 - MLT1F1 LTR MaLR -485 108 1 2543 278 35 14 chr10 36211015 36211876 -104104889 + L1ME3A LINE L1 5283 6161 -9 22 0 0 0 chr10 36211948 36211970 -104104795 + AT_rich Low_complexity Low_complexity 1 22 0 2094 115 31 0 chr10 36212140 36212426 -104104339 + AluSx SINE Alu 1 295 -17 480 200 0 0 chr10 36212690 36212795 -104103970 + (TG)n Simple_repeat Simple_repeat 2 106 0 2298 110 0 0 chr10 36213224 36213525 -104103240 - AluSg SINE Alu -9 301 1 195 100 0 0 chr10 36214171 36214201 -104102564 + (A)n Simple_repeat Simple_repeat 1 30 0 312 340 50 13 chr10 36215218 36215377 -104101388 + L2 LINE L2 2542 2706 -608 1124 291 48 39 chr10 36215387 36215929 -104100836 - HERVL LTR ERVL -1243 4411 3865 343 353 39 13 chr10 36215961 36216117 -104100648 - HERVL LTR ERVL -1939 3825 3666 1776 110 6 110 chr10 36216117 36216462 -104100303 - AluSc SINE Alu 0 309 1 1164 164 18 50 chr10 36216467 36216687 -104100078 - AluJo SINE Alu -17 295 83 2226 330 64 35 chr10 36216759 36217738 -104099027 - HERVL LTR ERVL -2101 3553 2475 1862 131 39 20 chr10 36217738 36218044 -104098721 - AluJo SINE Alu 0 312 1 2226 330 64 35 chr10 36218044 36218870 -104097895 - HERVL LTR ERVL -3179 2475 1675 398 217 96 0 chr10 36218933 36219016 -104097749 + MER58A DNA MER1_type 1 91 -16 748 321 8 8 chr10 36219058 36219310 -104097455 - HERVL LTR ERVL -3882 1114 863 1514 161 56 25 chr10 36219310 36219399 -104097366 - AluJb SINE Alu -14 298 213 3004 128 22 54 chr10 36219399 36219901 -104096864 + LTR19A LTR ERV1 1 486 0 1514 161 56 25 chr10 36219901 36220096 -104096669 - AluJb SINE Alu -99 213 5 222 37 0 0 chr10 36220635 36220662 -104096103 + (TA)n Simple_repeat Simple_repeat 2 28 0 2132 118 7 3 chr10 36220662 36220958 -104095807 - AluSc SINE Alu -12 297 1 1157 315 39 24 chr10 36221197 36221654 -104095111 - LTR16B LTR ERVL 0 464 1 1697 199 99 54 chr10 36221659 36221832 -104094933 + L1ME1 LINE L1 4583 4747 -1399 1960 164 29 32 chr10 36221832 36222179 -104094586 - MER7A DNA MER2_type -2 344 1 1697 199 99 54 chr10 36222179 36222251 -104094514 + L1ME1 LINE L1 4747 4814 -1332 1243 124 139 20 chr10 36222251 36222453 -104094312 + MER30 DNA MER1_type 1 226 -4 1697 199 99 54 chr10 36222453 36222759 -104094006 + L1ME1 LINE L1 4814 5160 -986 768 165 0 8 chr10 36222761 36222882 -104093883 + AluJb SINE Alu 1 120 -192 412 315 0 33 chr10 36223242 36223426 -104093339 + GA-rich Low_complexity Low_complexity 1 178 0 506 209 0 29 chr10 36223494 36223633 -104093132 + AluY SINE Alu 175 309 -2 3704 199 52 41 chr10 36223634 36224519 -104092246 + L1ME1 LINE L1 5153 6067 -99 3041 102 102 0 chr10 36224519 36224960 -104091805 - LTR19A LTR ERV1 0 486 1 3704 199 52 41 chr10 36224960 36225057 -104091708 + L1ME1 LINE L1 6067 6161 -5 25 0 0 0 chr10 36225131 36225156 -104091609 + AT_rich Low_complexity Low_complexity 1 25 0 586 226 162 39 chr10 36226159 36226363 -104090402 - MIR SINE MIR -26 236 8 365 208 0 13 chr10 36226365 36226442 -104090323 + MER116 DNA Mariner 3 78 -2 262 314 36 29 chr10 36226629 36226769 -104089996 + L3 LINE CR1 1332 1472 -105 6649 65 3 3 chr10 36226945 36227725 -104089040 - LTR17 LTR ERV1 0 780 1 1962 135 30 3 chr10 36228040 36228336 -104088429 - AluSx SINE Alu -7 305 2 206 162 27 0 chr10 36230232 36230269 -104086496 + T-rich Low_complexity Low_complexity 2 39 0 728 181 94 56 chr10 36230997 36231157 -104085608 + FAM SINE Alu 1 166 -9 1766 171 0 7 chr10 36231161 36231474 -104085291 + AluJo SINE Alu 3 313 0 21 0 0 0 chr10 36231583 36231604 -104085161 + AT_rich Low_complexity Low_complexity 1 21 0 260 340 85 21 chr10 36231751 36231939 -104084826 + L2 LINE L2 2681 2880 -434 302 256 24 61 chr10 36232230 36232394 -104084371 + MER113 DNA MER1_type? 7 164 -357 261 297 68 0 chr10 36232394 36232468 -104084297 + L2 LINE L2 3163 3241 -31 522 279 128 21 chr10 36232481 36232608 -104084157 + MER113 DNA MER1_type? 146 258 -263 2976 118 27 0 chr10 36232608 36233022 -104083743 + MSTA LTR MaLR 4 428 0 522 279 128 21 chr10 36233022 36233231 -104083534 + MER113 DNA MER1_type? 258 518 -3 1909 154 0 13 chr10 36233506 36233804 -104082961 - AluJb SINE Alu -18 294 1 2311 126 35 32 chr10 36234672 36235046 -104081719 - THE1C LTR MaLR 0 375 1 263 323 121 0 chr10 36235308 36235407 -104081358 - L2 LINE L2 0 3272 3162 366 330 0 0 chr10 36235456 36235568 -104081197 - L2 LINE L2 0 3313 3202 447 260 36 6 chr10 36235698 36235915 -104080850 + L1M4c LINE L1 2033 2265 -4117 1952 121 3 24 chr10 36235921 36236080 -104080685 + AluSg SINE Alu 1 153 -157 5034 51 5 5 chr10 36236080 36236671 -104080094 + LTR10C LTR ERV1 1 591 0 1952 121 3 24 chr10 36236671 36236800 -104079965 + AluSg SINE Alu 153 283 -27 216 0 0 0 chr10 36236804 36236828 -104079937 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 5157 234 22 12 chr10 36236829 36238204 -104078561 + L1M4c LINE L1 2311 3660 -2722 2552 197 119 7 chr10 36238204 36238783 -104077982 - LTR48B LTR ERV1 0 644 1 679 171 0 0 chr10 36239201 36239318 -104077447 + L1MA10 LINE L1 5154 5270 -876 1243 221 0 0 chr10 36239318 36239562 -104077203 + AluSx SINE Alu 1 244 -68 4707 209 29 19 chr10 36239627 36239668 -104077097 + L1MA10 LINE L1 5259 5298 -1036 180 0 0 0 chr10 36239668 36239688 -104077077 + (CAT)n Simple_repeat Simple_repeat 2 21 0 4707 209 29 19 chr10 36239688 36240523 -104076242 + L1MA10 LINE L1 5298 6150 -184 213 39 0 0 chr10 36240523 36240549 -104076216 + (CA)n Simple_repeat Simple_repeat 1 26 0 4707 209 29 19 chr10 36240549 36240729 -104076036 + L1MA10 LINE L1 6150 6327 -7 2544 238 50 41 chr10 36240738 36241032 -104075733 - L1MEc LINE L1 -1081 5134 4844 1772 186 0 10 chr10 36241032 36241333 -104075432 - AluJo SINE Alu -12 300 3 2544 238 50 41 chr10 36241333 36242010 -104074755 - L1MEc LINE L1 -1371 4844 4154 329 200 13 13 chr10 36242081 36242169 -104074596 - L1MEc LINE L1 -2374 3841 3754 409 94 16 0 chr10 36242170 36242234 -104074531 + (TTCC)n Simple_repeat Simple_repeat 2 66 0 1456 274 111 40 chr10 36242242 36242314 -104074451 - L1MEc LINE L1 -2452 3763 3698 1901 175 136 18 chr10 36242314 36242697 -104074068 - MSTA LTR MaLR 0 428 1 1456 274 111 40 chr10 36242697 36243846 -104072919 - L1MEc LINE L1 -2517 3698 2316 918 201 0 73 chr10 36243849 36244053 -104072712 - Tigger5 DNA MER2_type -3 2320 2132 1366 225 16 29 chr10 36244068 36244097 -104072668 - Tigger5 DNA MER2_type -2016 307 279 4330 91 13 2 chr10 36244097 36244645 -104072120 + MER41A LTR ERV1 1 554 0 1366 225 16 29 chr10 36244645 36244926 -104071839 - Tigger5 DNA MER2_type -2044 279 1 724 284 41 86 chr10 36245880 36246952 -104069813 - L1MEc LINE L1 -4583 1813 790 1657 246 93 14 chr10 36247469 36247966 -104068799 - MLT1G1 LTR MaLR -2 593 1 422 312 102 32 chr10 36248262 36248663 -104068102 - L2 LINE L2 -1103 2211 1783 545 138 0 0 chr10 36248672 36248752 -104068013 - MER41A LTR ERV1 0 554 475 2030 85 8 8 chr10 36248860 36249120 -104067645 - AluSx SINE Alu -29 283 24 376 321 113 54 chr10 36249359 36250101 -104066664 - L2 LINE L2 -2190 1124 339 4383 134 19 34 chr10 36250262 36250563 -104066202 + LTR8A LTR ERV1 1 305 -422 5134 127 22 17 chr10 36250563 36251338 -104065427 - MER4E LTR ERV1 0 779 1 4383 134 19 34 chr10 36251338 36251774 -104064991 + LTR8A LTR ERV1 305 727 0 590 270 92 80 chr10 36254259 36254582 -104062183 - MLT1H LTR MaLR 0 549 218 2403 148 11 16 chr10 36254582 36254959 -104061806 + THE1C LTR MaLR 1 375 0 590 270 92 80 chr10 36254959 36255061 -104061704 - MLT1H LTR MaLR -331 218 119 2299 118 28 22 chr10 36255282 36255637 -104061128 - THE1B LTR MaLR 0 364 8 180 167 130 19 chr10 36257134 36257181 -104059584 - L3 LINE CR1 -880 697 642 441 0 0 0 chr10 36257181 36257230 -104059535 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 2562 158 41 0 chr10 36260081 36260493 -104056272 - MSTB1 LTR MaLR 0 432 4 229 313 40 0 chr10 36260851 36260950 -104055815 - MIR SINE MIR -56 206 104 1167 214 54 90 chr10 36260967 36261355 -104055410 - MLT1B LTR MaLR -16 374 1 231 217 22 0 chr10 36261355 36261401 -104055364 - MIR SINE MIR -126 82 36 184 281 201 58 chr10 36261743 36261882 -104054883 + MIR3 SINE MIR 16 174 -34 23 33 0 0 chr10 36262488 36262518 -104054247 + AT_rich Low_complexity Low_complexity 1 30 0 277 240 53 93 chr10 36263858 36263979 -104052786 + MIR SINE MIR 33 148 -114 2253 110 0 31 chr10 36263979 36264298 -104052467 - AluSx SINE Alu -3 309 1 277 240 53 93 chr10 36264298 36264326 -104052439 + MIR SINE MIR 148 176 -86 379 202 76 59 chr10 36264326 36264445 -104052320 - MIR SINE MIR -62 200 80 751 232 54 54 chr10 36264682 36264746 -104052019 - MIR SINE MIR -8 254 191 1683 121 0 4 chr10 36264746 36264977 -104051788 + MER30 DNA MER1_type 1 230 0 751 232 54 54 chr10 36264977 36265136 -104051629 - MIR SINE MIR -70 192 31 487 161 0 21 chr10 36265273 36265366 -104051399 - LTR33 LTR ERVL -7 514 424 1739 160 22 0 chr10 36265502 36265940 -104050825 + AluSx SINE Alu 1 444 0 228 111 0 0 chr10 36265977 36266013 -104050752 + (GA)n Simple_repeat Simple_repeat 1 36 0 602 278 91 27 chr10 36266023 36266286 -104050479 - LTR33 LTR ERVL -237 284 5 267 317 33 55 chr10 36266313 36266496 -104050269 - L2 LINE L2 -1386 1928 1750 296 250 192 0 chr10 36266947 36267051 -104049714 + LTR47A LTR ERVL 261 384 -68 1195 104 0 0 chr10 36268460 36268624 -104048141 + AluY SINE Alu 137 300 -11 182 269 0 39 chr10 36268766 36268818 -104047947 - L2 LINE L2 0 3313 3264 202 345 80 85 chr10 36269138 36269226 -104047539 - L2 LINE L2 0 3272 3185 1975 142 0 7 chr10 36269226 36269559 -104047206 - AluSq SINE Alu 0 313 1 202 345 80 85 chr10 36269559 36269919 -104046846 - L2 LINE L2 -87 3185 2826 2057 164 9 18 chr10 36270769 36271111 -104045654 + MER44D DNA MER2_type 1 609 0 452 316 12 36 chr10 36271740 36271908 -104044857 + MER5A DNA MER1_type 26 189 0 396 129 0 29 chr10 36272291 36272361 -104044404 + MLT1A1 LTR MaLR 1 68 -297 928 248 139 34 chr10 36272361 36272786 -104043979 + LTR1B LTR ERV1 28 496 -330 1982 112 34 7 chr10 36272786 36273081 -104043684 + AluSq SINE Alu 11 313 0 270 209 48 150 chr10 36273108 36273295 -104043470 + LTR28 LTR ERV1 838 1005 -15 1490 205 38 7 chr10 36273318 36273611 -104043154 + MLT1A1 LTR MaLR 64 365 0 26 88 0 0 chr10 36274815 36274883 -104041882 + AT_rich Low_complexity Low_complexity 1 68 0 1297 284 91 45 chr10 36274935 36275739 -104041026 - L1M4 LINE L1 -922 5224 4384 2130 249 47 74 chr10 36275767 36275845 -104040920 + L1ME3A LINE L1 5254 5333 -837 1846 181 0 3 chr10 36275845 36276154 -104040611 + AluJb SINE Alu 1 308 -4 2130 249 47 74 chr10 36276154 36276268 -104040497 + L1ME3A LINE L1 5333 5449 -721 1947 162 23 45 chr10 36276268 36276371 -104040394 + MER2 DNA MER2_type 1 105 -239 1554 161 88 0 chr10 36276371 36276665 -104040100 + AluSx SINE Alu 1 317 0 1947 162 23 45 chr10 36276665 36276912 -104039853 + MER2 DNA MER2_type 105 344 0 2130 249 47 74 chr10 36276912 36277598 -104039167 + L1ME3A LINE L1 5449 6109 -61 362 304 19 0 chr10 36278012 36278173 -104038592 + (TA)n Simple_repeat Simple_repeat 1 164 0 311 247 36 13 chr10 36278835 36279143 -104037622 + (TGAA)n Simple_repeat Simple_repeat 1 315 0 359 328 35 18 chr10 36279270 36279441 -104037324 - LTR16C LTR ERVL -4 487 314 1325 210 176 29 chr10 36279683 36280085 -104036680 + MLT2B1 LTR ERVL 1 467 -53 468 51 0 0 chr10 36280085 36280144 -104036621 + (TC)n Simple_repeat Simple_repeat 2 60 0 1325 210 176 29 chr10 36280144 36280156 -104036609 + MLT2B1 LTR ERVL 467 476 -44 252 167 42 0 chr10 36280183 36280255 -104036510 + (TA)n Simple_repeat Simple_repeat 1 75 0 249 108 0 0 chr10 36280256 36280293 -104036472 + (CA)n Simple_repeat Simple_repeat 2 38 0 1564 194 29 51 chr10 36280293 36280436 -104036329 + MER2 DNA MER2_type 3 148 -197 1457 94 94 9 chr10 36280436 36280648 -104036117 - MER30 DNA MER1_type 0 230 1 1564 194 29 51 chr10 36280648 36280855 -104035910 + MER2 DNA MER2_type 148 345 0 2847 132 4 69 chr10 36281951 36282030 -104034735 + L1PA15 LINE L1 5703 5786 -379 2076 124 6 19 chr10 36282030 36282344 -104034421 + AluSx SINE Alu 1 310 -2 2847 132 4 69 chr10 36282344 36282757 -104034008 + L1PA15 LINE L1 5786 6163 -2 3226 97 12 7 chr10 36282973 36283405 -104033360 - MER57B LTR ERV1 0 434 1 1053 246 131 19 chr10 36284022 36284449 -104032316 - MLT1D LTR MaLR 0 505 31 2007 139 16 3 chr10 36284548 36284851 -104031914 - AluJb SINE Alu -5 307 1 2554 131 64 5 chr10 36285507 36285911 -104030854 - MSTA LTR MaLR 0 428 1 411 352 36 10 chr10 36286211 36286407 -104030358 + MIR SINE MIR 8 208 -54 2463 160 67 4 chr10 36287587 36288050 -104028715 - L1MB4 LINE L1 -2 6178 5687 1482 176 51 30 chr10 36288053 36288396 -104028369 - MSTA LTR MaLR 0 375 1 1459 178 0 46 chr10 36288396 36288638 -104028127 - L1MB4 LINE L1 -492 5688 5461 2076 199 56 7 chr10 36288638 36289081 -104027684 + MER31B LTR ERV1 2 466 0 1459 178 0 46 chr10 36289081 36289142 -104027623 - L1MB4 LINE L1 -719 5461 5399 1507 187 23 37 chr10 36289275 36289574 -104027191 + AluJo SINE Alu 1 295 -17 1886 141 25 3 chr10 36289576 36289860 -104026905 + AluSg SINE Alu 1 290 -20 226 234 64 0 chr10 36291130 36291177 -104025588 - MER91A DNA MER1_type -19 177 128 2070 108 0 74 chr10 36292004 36292328 -104024437 - AluSq SINE Alu -13 300 1 395 283 38 82 chr10 36292562 36292746 -104024019 - MIR SINE MIR -69 139 17 532 216 10 0 chr10 36293445 36293542 -104023223 - MER58A DNA MER1_type -6 101 4 574 319 123 36 chr10 36295764 36296387 -104020378 + L2 LINE L2 2599 3285 -28 489 236 50 71 chr10 36296479 36296661 -104020104 + L1ME LINE L1 5551 5728 -393 387 0 0 0 chr10 36297786 36297829 -104018936 + (TG)n Simple_repeat Simple_repeat 2 44 0 30 0 0 0 chr10 36298425 36298455 -104018310 + AT_rich Low_complexity Low_complexity 1 30 0 2013 133 3 30 chr10 36298608 36298910 -104017855 - AluSq SINE Alu -19 294 1 198 339 62 0 chr10 36299651 36299716 -104017049 + MIR3 SINE MIR 5 73 -135 2396 171 87 5 chr10 36299776 36300202 -104016563 + LOR1b LTR ERV1 1 461 0 2306 112 0 0 chr10 36300451 36300756 -104016009 + AluSq SINE Alu 1 305 -8 777 138 7 90 chr10 36303073 36303218 -104013547 - FLAM_A SINE Alu 0 133 1 189 0 0 0 chr10 36303602 36303623 -104013142 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 1624 168 26 53 chr10 36304447 36304750 -104012015 + AluJo SINE Alu 1 295 -17 2334 100 10 0 chr10 36305688 36305997 -104010768 - AluSq SINE Alu 0 313 2 1278 129 20 0 chr10 36306116 36306318 -104010447 + MER2 DNA MER2_type 5 210 -135 560 70 12 0 chr10 36307049 36307135 -104009630 + (TA)n Simple_repeat Simple_repeat 2 88 0 1620 161 24 37 chr10 36307835 36308133 -104008632 + AluJo SINE Alu 1 294 -18 30 0 0 0 chr10 36308133 36308163 -104008602 + AT_rich Low_complexity Low_complexity 1 30 0 186 71 0 0 chr10 36308644 36308672 -104008093 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2300 115 0 3 chr10 36308676 36308989 -104007776 - AluSx SINE Alu 0 312 1 192 40 0 0 chr10 36309486 36309511 -104007254 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 198 0 0 0 chr10 36310303 36310325 -104006440 + (T)n Simple_repeat Simple_repeat 1 22 0 197 267 83 17 chr10 36311109 36311169 -104005596 + MIR3 SINE MIR 125 188 -20 3065 125 7 0 chr10 36311599 36312023 -104004742 + MER1A DNA MER1_type 103 529 0 207 346 0 39 chr10 36312118 36312222 -104004543 + L2 LINE L2 2868 2967 -305 413 203 219 41 chr10 36312813 36312936 -104003829 + MIR SINE MIR 7 151 -111 1959 171 9 91 chr10 36312970 36313018 -104003747 + MER82 DNA MER2_type 2 52 -601 1960 146 4 4 chr10 36313018 36313299 -104003466 + AluJo SINE Alu 1 281 -31 212 0 36 0 chr10 36313303 36313331 -104003434 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1959 171 9 91 chr10 36313331 36313728 -104003037 + MER82 DNA MER2_type 55 415 -238 1555 206 28 22 chr10 36313731 36314069 -104002696 + MLT2C1 LTR ERVL 83 406 -8 2059 118 60 35 chr10 36314123 36314489 -104002276 - THE1C LTR MaLR 0 375 1 317 238 0 0 chr10 36314684 36314747 -104002018 - MIR3 SINE MIR -6 202 140 183 152 30 0 chr10 36315800 36315833 -104000932 + L3b LINE CR1 1194 1227 -356 316 322 50 39 chr10 36316025 36316205 -104000560 - MIR3 SINE MIR -10 198 17 284 191 79 0 chr10 36317342 36317405 -103999360 + MIR SINE MIR 185 252 -10 2177 111 3 0 chr10 36317746 36318035 -103998730 - AluSg SINE Alu -20 290 1 219 127 48 0 chr10 36318077 36318140 -103998625 + (TA)n Simple_repeat Simple_repeat 1 66 0 28 48 0 0 chr10 36318209 36318251 -103998514 + AT_rich Low_complexity Low_complexity 1 42 0 28 48 0 0 chr10 36318307 36318349 -103998416 + AT_rich Low_complexity Low_complexity 1 42 0 347 340 45 13 chr10 36318380 36318536 -103998229 - HAL1 LINE L1 -769 1738 1578 291 307 65 89 chr10 36318616 36319075 -103997690 - MLT1J LTR MaLR -62 449 2 689 128 0 0 chr10 36319330 36319424 -103997341 - AluJb SINE Alu -16 296 203 2085 129 0 10 chr10 36320242 36320551 -103996214 - AluSx SINE Alu -6 306 1 1455 190 4 4 chr10 36320736 36321004 -103995761 - AluJb SINE Alu -44 268 1 1333 192 4 0 chr10 36321006 36321282 -103995483 - L1 LINE L1 -3104 3042 2766 281 115 0 19 chr10 36321282 36321334 -103995431 - Alu SINE Alu 0 302 252 4320 166 8 33 chr10 36323566 36324418 -103992347 - L1MC1 LINE L1 -165 6666 5836 4480 207 49 37 chr10 36324975 36326070 -103990695 - L1MC1 LINE L1 -5145 1489 278 505 179 38 28 chr10 36326242 36326348 -103990417 - MER7A DNA MER2_type -241 105 1 279 0 0 0 chr10 36326353 36326384 -103990381 + (CA)n Simple_repeat Simple_repeat 2 32 0 34 55 0 0 chr10 36326596 36326651 -103990114 + AT_rich Low_complexity Low_complexity 1 55 0 1099 111 6 6 chr10 36327485 36327665 -103989100 + (TTC)n Simple_repeat Simple_repeat 1 180 0 2092 119 0 0 chr10 36329107 36329409 -103987356 + AluSx SINE Alu 1 302 -10 284 331 69 14 chr10 36330025 36330170 -103986595 - L2 LINE L2 -190 3082 2930 397 294 90 28 chr10 36380580 36380757 -103936008 + LTR33 LTR ERVL 334 521 0 193 307 133 0 chr10 36381135 36381210 -103935555 - MIR3 SINE MIR -21 187 103 2018 150 0 0 chr10 36381379 36381673 -103935092 - AluJb SINE Alu -18 294 1 2296 117 0 0 chr10 36381808 36382116 -103934649 + AluSx SINE Alu 1 308 -4 295 214 34 0 chr10 36382131 36382220 -103934545 + (TATATG)n Simple_repeat Simple_repeat 3 94 0 1543 193 23 3 chr10 36382716 36383021 -103933744 - AluJb SINE Alu -1 311 1 5670 86 9 0 chr10 36383497 36384182 -103932583 + LTR8 LTR ERV1 1 691 0 257 352 24 24 chr10 36384598 36384723 -103932042 + MIR SINE MIR 22 146 -62 1497 171 4 29 chr10 36386293 36386567 -103930198 + AluJo SINE Alu 21 287 -25 1077 118 0 9 chr10 36388281 36388501 -103928264 + (GGAA)n Simple_repeat Simple_repeat 4 219 0 1564 116 4 4 chr10 36388602 36388827 -103927938 + L1MA4A LINE L1 6072 6296 -7 1485 168 6 128 chr10 36388849 36389176 -103927589 + AluJb SINE Alu 1 287 -15 1150 121 56 0 chr10 36390830 36391028 -103925737 - L1MA8 LINE L1 -5 6286 6078 2323 102 3 0 chr10 36391030 36391334 -103925431 - AluSg SINE Alu -5 305 1 437 182 0 13 chr10 36391336 36391413 -103925352 - AluJo SINE Alu -176 136 61 813 207 86 94 chr10 36391422 36391737 -103925028 + L2 LINE L2 2758 3074 -239 2063 122 7 14 chr10 36392551 36392845 -103923920 - AluSx SINE Alu -20 292 1 1560 180 54 0 chr10 36392929 36393051 -103923714 + AluJo SINE Alu 1 115 -197 189 0 0 0 chr10 36393051 36393072 -103923693 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1560 180 54 0 chr10 36393072 36393227 -103923538 + AluJo SINE Alu 115 293 -19 231 301 60 24 chr10 36393266 36393349 -103923416 - MIR3 SINE MIR -9 199 114 696 266 47 10 chr10 36393370 36393562 -103923203 - MIR SINE MIR 0 262 64 240 222 74 49 chr10 36393609 36393690 -103923075 - MIR SINE MIR -107 101 19 3007 83 3 0 chr10 36394869 36395232 -103921533 + THE1B LTR MaLR 1 364 0 27 0 0 0 chr10 36395469 36395496 -103921269 + AT_rich Low_complexity Low_complexity 1 27 0 341 94 19 0 chr10 36396030 36396083 -103920682 + MER9 LTR ERVK 1 54 -457 1032 122 0 0 chr10 36396186 36396350 -103920415 + (GGAA)n Simple_repeat Simple_repeat 1 164 0 999 125 0 0 chr10 36396947 36397083 -103919682 + AluSq/x SINE Alu 1 136 -176 683 80 20 20 chr10 36397085 36397185 -103919580 + AluY SINE Alu 210 309 -2 998 167 0 0 chr10 36397317 36397479 -103919286 + AluSx SINE Alu 146 307 -5 2201 128 0 0 chr10 36398409 36398706 -103918059 - AluSx SINE Alu -15 297 1 1714 172 0 40 chr10 36399567 36399869 -103916896 - AluJb SINE Alu -22 290 1 243 359 39 64 chr10 36400193 36400427 -103916338 - L2 LINE L2 -13 3259 3032 1731 160 59 3 chr10 36400446 36400734 -103916031 + AluJb SINE Alu 1 304 -8 2636 55 0 0 chr10 36401702 36402010 -103914755 + AluY SINE Alu 1 308 -3 950 291 19 12 chr10 36402192 36402450 -103914315 - MLT1L LTR MaLR -7 608 349 504 269 72 10 chr10 36402500 36402693 -103914072 - MLT1L LTR MaLR -409 206 2 276 333 12 0 chr10 36402694 36402775 -103913990 - L2 LINE L2 -47 3266 3185 2328 99 3 3 chr10 36403415 36403718 -103913047 - AluSq SINE Alu -10 303 1 3123 153 39 7 chr10 36403731 36404512 -103912253 + L1MA8 LINE L1 4856 5809 -482 367 29 57 14 chr10 36404512 36404582 -103912183 + (TAGA)n Simple_repeat Simple_repeat 2 74 0 3123 153 39 7 chr10 36404582 36405077 -103911688 + L1MA8 LINE L1 5809 6287 -4 1961 107 0 11 chr10 36405151 36405412 -103911353 + AluSx SINE Alu 1 258 -54 561 265 157 10 chr10 36405488 36405692 -103911073 - MIR SINE MIR 0 262 29 322 241 30 108 chr10 36406462 36406658 -103910107 + MIR SINE MIR 38 216 -46 1667 169 30 71 chr10 36406813 36407015 -103909750 - MLT1B LTR MaLR -35 355 173 1870 165 0 16 chr10 36407015 36407318 -103909447 - AluJb SINE Alu -14 298 1 1667 169 30 71 chr10 36407318 36407482 -103909283 - MLT1B LTR MaLR -217 173 4 212 0 36 0 chr10 36407606 36407634 -103909131 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1725 169 10 7 chr10 36407639 36407934 -103908831 - AluJo SINE Alu -16 296 1 2788 105 0 3 chr10 36408038 36408409 -103908356 - L1PB1 LINE L1 0 6151 5782 223 78 31 62 chr10 36408418 36408482 -103908283 + (TA)n Simple_repeat Simple_repeat 2 63 0 180 357 12 12 chr10 36410966 36411050 -103905715 - MIR SINE MIR -22 240 157 2328 96 6 3 chr10 36411169 36411481 -103905284 - AluSq SINE Alu 0 313 1 219 139 0 0 chr10 36412846 36412882 -103903883 + (T)n Simple_repeat Simple_repeat 1 36 0 334 328 89 64 chr10 36413781 36414455 -103902310 + L2 LINE L2 2196 2886 -428 227 338 0 26 chr10 36414509 36414586 -103902179 + L2 LINE L2 2992 3066 -206 368 324 143 50 chr10 36414980 36415148 -103901617 - L2 LINE L2 -15 3298 3096 2194 133 0 0 chr10 36415148 36415450 -103901315 + AluSq SINE Alu 1 302 -11 368 324 143 50 chr10 36415450 36415540 -103901225 - L2 LINE L2 -217 3096 3016 319 210 25 109 chr10 36415541 36415660 -103901105 - ERVL LTR ERVL -1119 4645 4537 249 180 0 0 chr10 36415699 36415749 -103901016 + CT-rich Low_complexity Low_complexity 3 52 0 2112 315 103 75 chr10 36415810 36417216 -103899549 - ERVL LTR ERVL -1382 4382 2887 4760 170 3 4 chr10 36417216 36417946 -103898819 + MER44D DNA MER2_type 4 604 -1 2112 315 103 75 chr10 36417946 36418789 -103897976 - ERVL LTR ERVL -2877 2887 2069 213 39 0 0 chr10 36418889 36418915 -103897850 + (TTTTC)n Simple_repeat Simple_repeat 2 27 0 2124 121 0 0 chr10 36418917 36419199 -103897566 - AluSx SINE Alu -30 282 1 1206 325 103 44 chr10 36419200 36420279 -103896486 + L2 LINE L2 2148 3309 -4 307 323 82 39 chr10 36420328 36420585 -103896180 - ERVL LTR ERVL -3736 2028 1761 358 348 43 29 chr10 36421282 36421627 -103895138 - L2 LINE L2 -523 2791 2442 233 161 81 48 chr10 36421933 36421995 -103894770 + MER91C DNA MER1_type 21 84 -56 207 0 0 0 chr10 36422816 36422839 -103893926 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2232 139 96 3 chr10 36424884 36425256 -103891509 + MSTB1 LTR MaLR 4 410 -22 1651 119 13 0 chr10 36425256 36425483 -103891282 - MER30 DNA MER1_type 0 230 1 265 171 0 61 chr10 36425563 36425645 -103891120 + T-rich Low_complexity Low_complexity 6 82 0 232 157 0 39 chr10 36425737 36425788 -103890977 + T-rich Low_complexity Low_complexity 6 54 0 300 53 0 0 chr10 36427310 36427348 -103889417 + (CA)n Simple_repeat Simple_repeat 1 38 0 367 172 11 11 chr10 36427366 36427453 -103889312 + (TA)n Simple_repeat Simple_repeat 2 88 0 1911 163 0 0 chr10 36427454 36427742 -103889023 - AluSx SINE Alu -24 288 1 372 259 96 32 chr10 36427844 36427990 -103888775 - MIR SINE MIR -65 143 15 21 82 0 0 chr10 36428358 36428407 -103888358 + AT_rich Low_complexity Low_complexity 1 49 0 1462 177 9 78 chr10 36428413 36428735 -103888030 + AluJo SINE Alu 1 300 -2 283 264 0 47 chr10 36429437 36429464 -103887301 + LTR67 LTR ERVL 457 484 -73 284 229 16 0 chr10 36429464 36429525 -103887240 + MLT1K LTR MaLR 509 570 -18 283 264 0 47 chr10 36429525 36429543 -103887222 + LTR67 LTR ERVL 484 557 0 1863 152 24 3 chr10 36431758 36432048 -103884717 + AluJb SINE Alu 1 296 -16 26 30 0 0 chr10 36432438 36432471 -103884294 + AT_rich Low_complexity Low_complexity 1 33 0 1437 196 0 8 chr10 36432471 36432721 -103884044 - AluJo SINE Alu -64 248 1 514 339 102 39 chr10 36433015 36433827 -103882938 - L2 LINE L2 -475 2839 1977 280 326 21 21 chr10 36433866 36434007 -103882758 - MIR3 SINE MIR -33 175 35 23 0 0 0 chr10 36434341 36434364 -103882401 + AT_rich Low_complexity Low_complexity 1 23 0 4322 131 5 2 chr10 36434751 36435384 -103881381 + MER41B LTR ERV1 1 635 0 207 0 0 0 chr10 36435934 36435957 -103880808 + (TTA)n Simple_repeat Simple_repeat 2 24 0 3564 151 54 72 chr10 36437126 36437926 -103878839 + LTR1 LTR ERV1 1 785 0 4054 127 26 2 chr10 36438318 36438938 -103877827 - MER41B LTR ERV1 0 635 1 2162 116 0 29 chr10 36438979 36439290 -103877475 + AluSq SINE Alu 5 306 -7 500 118 0 0 chr10 36441523 36441591 -103875174 + AluJ/FLAM SINE Alu 17 84 -228 24 0 0 0 chr10 36442412 36442436 -103874329 + AT_rich Low_complexity Low_complexity 1 24 0 2006 139 0 0 chr10 36443507 36443816 -103872949 + AluSx SINE Alu 2 310 0 234 0 0 0 chr10 36444537 36444563 -103872202 + (TG)n Simple_repeat Simple_repeat 1 26 0 265 250 0 0 chr10 36445114 36445211 -103871554 + (TTCA)n Simple_repeat Simple_repeat 1 97 0 915 129 0 0 chr10 36445215 36445339 -103871426 - FLAM_C SINE Alu -18 125 2 2355 103 7 0 chr10 36445674 36445984 -103870781 + AluSx SINE Alu 1 312 0 2380 133 23 16 chr10 36446160 36446545 -103870220 - LTR45B LTR ERV1 -98 391 4 1755 215 37 37 chr10 36446940 36447405 -103869360 - MLT1C LTR MaLR 0 467 3 15075 133 30 15 chr10 36447458 36449645 -103867120 + Tigger1 DNA MER2_type 1 2228 -190 1994 156 7 0 chr10 36449645 36449946 -103866819 - AluSx SINE Alu -7 305 3 15075 133 30 15 chr10 36449946 36450140 -103866625 + Tigger1 DNA MER2_type 2228 2418 0 195 167 104 21 chr10 36452059 36452107 -103864658 - MIR SINE MIR -9 253 202 1746 167 29 4 chr10 36452224 36452505 -103864260 + AluJo SINE Alu 5 292 -20 382 260 97 15 chr10 36452765 36452961 -103863804 - L1MC4a LINE L1 -1894 5914 5703 1854 104 23 68 chr10 36453204 36453513 -103863252 - AluSq SINE Alu -18 295 1 233 252 193 47 chr10 36455150 36455411 -103861354 + L1ME4a LINE L1 5754 6072 -49 2092 121 21 0 chr10 36455411 36455701 -103861064 + AluSx SINE Alu 1 296 -16 233 252 193 47 chr10 36455701 36455760 -103861005 + L1ME4a LINE L1 6072 6121 0 2122 73 24 21 chr10 36455763 36456050 -103860715 + AluY SINE Alu 1 288 -23 194 62 31 0 chr10 36456053 36456085 -103860680 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 2074 120 27 3 chr10 36456090 36456390 -103860375 + AluSx SINE Alu 1 307 -5 1870 212 104 103 chr10 36457531 36458223 -103858542 - LTR8A LTR ERV1 -1 726 34 253 283 38 47 chr10 36458343 36458449 -103858316 + MIR3 SINE MIR 85 189 -19 1094 125 0 12 chr10 36458994 36459154 -103857611 - FRAM SINE Alu -9 167 10 1380 186 11 34 chr10 36459165 36459434 -103857331 - AluJb SINE Alu -7 305 43 1345 209 56 48 chr10 36459795 36460135 -103856630 - MER21B LTR ERV1 -1 862 520 1223 195 112 16 chr10 36460135 36460209 -103856556 + LTR39 LTR ERV1 2 67 -716 1909 151 0 24 chr10 36460209 36460507 -103856258 + AluJb SINE Alu 6 296 -16 1223 195 112 16 chr10 36460507 36460770 -103855995 + LTR39 LTR ERV1 67 402 -381 1179 178 26 74 chr10 36460758 36460855 -103855910 + LTR39 LTR ERV1 527 627 -156 * 2147 139 0 3 chr10 36460855 36461165 -103855600 + AluSq SINE Alu 1 309 -4 1179 178 26 74 chr10 36461165 36461337 -103855428 + LTR39 LTR ERV1 627 783 0 1220 199 182 96 chr10 36461344 36461487 -103855278 - MER21B LTR ERV1 -340 523 394 4267 122 8 14 chr10 36461487 36462126 -103854639 - MER41B LTR ERV1 0 635 1 1220 199 182 96 chr10 36462126 36462459 -103854306 - MER21B LTR ERV1 -469 394 6 1865 151 14 0 chr10 36463166 36463469 -103853296 - AluSx SINE Alu 0 307 1 1812 150 0 17 chr10 36464452 36464739 -103852026 + AluJo SINE Alu 2 283 -29 366 302 148 0 chr10 36465947 36466129 -103850636 - MIR SINE MIR -6 256 48 2509 87 0 0 chr10 36466168 36466479 -103850286 - AluSx SINE Alu -1 311 1 216 0 0 0 chr10 36467079 36467103 -103849662 + (CA)n Simple_repeat Simple_repeat 1 24 0 480 71 12 83 chr10 36467378 36467425 -103849340 - MADE1 DNA Mariner -1 79 39 1585 130 153 0 chr10 36467425 36467687 -103849078 + AluSx SINE Alu 1 302 0 480 71 12 83 chr10 36467687 36467723 -103849042 - MADE1 DNA Mariner -41 39 2 457 293 19 56 chr10 36468243 36468321 -103848444 - MIR SINE MIR -44 218 139 2177 100 4 0 chr10 36468321 36468623 -103848142 - AluSx SINE Alu 0 303 1 457 293 19 56 chr10 36468623 36468760 -103848005 - MIR SINE MIR -123 139 13 647 110 53 17 chr10 36469531 36469759 -103847006 + (TCTA)n Simple_repeat Simple_repeat 1 236 0 213 154 0 0 chr10 36470161 36470200 -103846565 + (TG)n Simple_repeat Simple_repeat 1 39 0 973 193 17 0 chr10 36472206 36472387 -103844378 - AluJo SINE Alu -10 302 119 718 183 0 0 chr10 36472422 36472548 -103844217 - AluJo SINE Alu -186 126 1 1499 189 54 4 chr10 36472578 36472858 -103843907 + AluJb SINE Alu 3 296 -16 418 143 0 0 chr10 36473374 36473430 -103843335 - Alu SINE Alu -20 292 237 1892 130 7 0 chr10 36473430 36473700 -103843065 - AluSx SINE Alu -40 272 1 226 343 0 0 chr10 36473821 36473894 -103842871 + L2 LINE L2 3241 3313 0 2057 136 7 0 chr10 36474572 36474880 -103841885 - AluSx SINE Alu 0 312 3 215 260 27 0 chr10 36475331 36475356 -103841409 + (TA)n Simple_repeat Simple_repeat 2 25 -51 2038 129 6 13 chr10 36475356 36475667 -103841098 - AluSx SINE Alu -3 309 1 215 260 27 0 chr10 36475667 36475714 -103841051 + (TA)n Simple_repeat Simple_repeat 25 76 0 863 179 60 0 chr10 36475781 36475932 -103840833 - AluSg/x SINE Alu -16 294 135 1448 236 120 85 chr10 36475973 36476320 -103840445 - MER21B LTR ERV1 -124 739 405 2893 94 6 0 chr10 36476320 36476682 -103840083 - THE1B LTR MaLR 0 364 1 1448 236 120 85 chr10 36476682 36477028 -103839737 - MER21B LTR ERV1 -458 405 22 1777 244 26 24 chr10 36477288 36477746 -103839019 + L1MC4 LINE L1 7335 7793 -249 355 263 35 76 chr10 36477762 36478051 -103838714 + L1MC4 LINE L1 7759 8035 -7 1464 164 52 45 chr10 36478053 36478340 -103838425 + AluJb SINE Alu 1 289 -23 181 349 72 0 chr10 36478580 36478663 -103838102 - L2 LINE L2 -28 3285 3197 2312 107 85 8 chr10 36478837 36479359 -103837406 - MER51A LTR ERV1 -1 633 1 456 104 0 0 chr10 36480452 36480519 -103836246 + (TA)n Simple_repeat Simple_repeat 1 67 0 1589 190 24 10 chr10 36481900 36482190 -103834575 + AluJo SINE Alu 3 296 -16 2117 92 4 0 chr10 36482888 36483193 -103833572 - AluY SINE Alu 0 306 1 2149 111 3 3 chr10 36483257 36483555 -103833210 - AluSg SINE Alu -12 298 1 261 98 0 0 chr10 36484501 36484542 -103832223 + (CA)n Simple_repeat Simple_repeat 2 42 0 3656 104 7 59 chr10 36485913 36486212 -103830553 + LTR26B LTR ERV1 2 260 -271 2227 126 7 0 chr10 36486212 36486522 -103830243 - AluSx SINE Alu 0 312 1 3656 104 7 59 chr10 36486522 36486781 -103829984 + LTR26B LTR ERV1 260 531 0 319 319 151 7 chr10 36487092 36487313 -103829452 - MIR3 SINE MIR -10 252 4 243 310 184 0 chr10 36488974 36489061 -103827704 + L2 LINE L2 3168 3270 -2 23 54 0 0 chr10 36489063 36489100 -103827665 + AT_rich Low_complexity Low_complexity 1 37 0 218 296 19 0 chr10 36489188 36489242 -103827523 + L2 LINE L2 3217 3271 -1 5039 99 19 1 chr10 36490167 36490843 -103825922 + L1PA8 LINE L1 5482 6169 -3 1457 216 83 22 chr10 36490940 36491184 -103825581 - MER110A LTR ERV1 0 468 188 1981 204 91 66 chr10 36491184 36491791 -103824974 - LTR26E LTR ERV1 0 622 1 1457 216 83 22 chr10 36491791 36491953 -103824812 - MER110A LTR ERV1 -280 188 37 2336 93 0 10 chr10 36492108 36492418 -103824347 - AluY SINE Alu -4 307 1 904 181 91 19 chr10 36492638 36492848 -103823917 + MER110A LTR ERV1 1 225 -243 4791 49 3 3 chr10 36493044 36493612 -103823153 + L1PA8 LINE L1 5605 6172 0 509 289 66 16 chr10 36493671 36493913 -103822852 - MER41B LTR ERV1 -205 430 177 797 248 49 0 chr10 36494027 36494253 -103822512 + MER110A LTR ERV1 232 468 0 2394 64 0 0 chr10 36495953 36496260 -103820505 + AluY SINE Alu 1 307 0 21 0 0 0 chr10 36496562 36496583 -103820182 + AT_rich Low_complexity Low_complexity 1 21 0 260 287 28 19 chr10 36497441 36497549 -103819216 - MER110A LTR ERV1 -18 450 342 254 234 69 150 chr10 36497556 36497625 -103819140 - LTR48B LTR ERV1 -11 633 560 2173 129 3 0 chr10 36497625 36497935 -103818830 + AluSx SINE Alu 1 311 -1 1628 118 51 0 chr10 36497936 36498173 -103818592 + AluSp SINE Alu 34 282 -31 207 0 0 0 chr10 36498176 36498199 -103818566 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 254 234 69 150 chr10 36498199 36498312 -103818453 - LTR48B LTR ERV1 -86 558 471 2507 74 0 0 chr10 36498312 36498611 -103818154 - AluY SINE Alu -12 299 1 254 234 69 150 chr10 36498611 36498695 -103818070 - LTR48B LTR ERV1 -173 471 382 225 274 16 65 chr10 36498774 36498898 -103817867 - LTR48B LTR ERV1 -408 236 119 997 213 90 60 chr10 36498899 36499232 -103817533 - MER110A LTR ERV1 -125 343 1 2207 101 14 3 chr10 36499676 36499973 -103816792 + AluSp SINE Alu 1 300 -13 1813 207 114 51 chr10 36500331 36501068 -103815697 + LTR1B LTR ERV1 1 772 -13 1651 177 0 27 chr10 36501357 36501657 -103815108 + AluJb SINE Alu 1 292 -20 388 271 0 5 chr10 36502119 36502235 -103814530 + MIR SINE MIR 30 143 -65 336 24 0 0 chr10 36502403 36502444 -103814321 + (TG)n Simple_repeat Simple_repeat 2 42 0 2536 94 64 0 chr10 36502830 36503172 -103813593 - THE1B LTR MaLR 0 364 1 1950 154 0 3 chr10 36503200 36503519 -103813246 - AluSx SINE Alu 0 318 1 21 0 0 0 chr10 36503519 36503540 -103813225 + AT_rich Low_complexity Low_complexity 1 21 0 1374 165 0 25 chr10 36503549 36503785 -103812980 - AluJo SINE Alu -20 292 63 321 294 0 22 chr10 36503786 36503802 -103812963 - L1MC4 LINE L1 -1339 6703 6688 315 49 0 0 chr10 36503802 36503843 -103812922 + (CA)n Simple_repeat Simple_repeat 2 42 0 321 294 0 22 chr10 36503843 36503918 -103812847 - L1MC4 LINE L1 -1354 6688 6614 * 333 300 0 0 chr10 36503914 36504004 -103812761 + L1MC4 LINE L1 6614 6703 -1339 2172 123 0 3 chr10 36504009 36504318 -103812447 - AluSq SINE Alu -5 308 1 1228 181 0 0 chr10 36504318 36504517 -103812248 - AluJb SINE Alu -109 203 5 1553 122 30 0 chr10 36504525 36504762 -103812003 - L1PA16 LINE L1 -16 6150 5907 2287 123 0 0 chr10 36505646 36505947 -103810818 + AluSx SINE Alu 1 301 -11 270 0 0 0 chr10 36505947 36505977 -103810788 + (TC)n Simple_repeat Simple_repeat 2 31 0 243 0 0 0 chr10 36505976 36506003 -103810762 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 187 304 43 0 chr10 36506129 36506198 -103810567 - MIR SINE MIR -74 188 117 2394 133 34 11 chr10 36506575 36506929 -103809836 - THE1B LTR MaLR 0 364 3 12886 80 4 4 chr10 36506933 36508512 -103808253 - THE1B-int LTR MaLR -2 1578 1 2449 130 30 22 chr10 36508512 36508873 -103807892 - THE1B LTR MaLR 0 364 1 493 169 0 0 chr10 36510410 36510487 -103806278 + L1 LINE L1 2662 2738 -3408 841 177 41 0 chr10 36510488 36510635 -103806130 + MSTD LTR MaLR 1 153 -243 27276 40 2 0 chr10 36510638 36511336 -103805429 - L1PA4 LINE L1 0 6155 5460 2207 101 7 3 chr10 36511336 36511633 -103805132 - AluY SINE Alu -13 298 1 27276 40 2 0 chr10 36511633 36514892 -103801873 - L1PA4 LINE L1 -695 5460 2224 15764 69 3 0 chr10 36514892 36516881 -103799884 - L1P LINE L1 -4006 2140 145 1315 170 26 9 chr10 36516882 36517111 -103799654 + MSTD LTR MaLR 164 396 0 3339 186 60 17 chr10 36517111 36517954 -103798811 + L1 LINE L1 2735 3614 -2532 1436 193 33 36 chr10 36517950 36518287 -103798478 + L1MA7 LINE L1 5953 6288 -3 * 216 317 143 50 chr10 36518336 36518595 -103798170 + L2 LINE L2 2974 3256 -16 1986 101 10 57 chr10 36519228 36519565 -103797200 - AluSx SINE Alu 0 323 1 1760 188 26 8 chr10 36519712 36520167 -103796598 - LTR53 LTR ERVL -1 518 9 1355 103 73 90 chr10 36520700 36520813 -103795952 - MER30 DNA MER1_type 0 230 117 1990 147 13 0 chr10 36520813 36521112 -103795653 - AluSx SINE Alu -9 303 1 1355 103 73 90 chr10 36521112 36521232 -103795533 - MER30 DNA MER1_type -113 117 1 309 252 165 0 chr10 36522495 36522598 -103794167 - MER94 DNA DNA 0 134 15 2367 85 0 3 chr10 36523431 36523726 -103793039 - AluSc SINE Alu -15 294 1 476 319 140 36 chr10 36525042 36525399 -103791366 + MLT1I LTR MaLR 1 394 -15 454 287 20 0 chr10 36526727 36526828 -103789937 + L2 LINE L2 3154 3256 -16 200 268 0 0 chr10 36526794 36526835 -103789930 + MIR SINE MIR 219 259 -3 * 2250 115 0 6 chr10 36527093 36527406 -103789359 - AluSx SINE Alu -1 311 1 405 0 0 0 chr10 36527993 36528038 -103788727 + (CA)n Simple_repeat Simple_repeat 1 45 0 400 305 145 48 chr10 36528045 36528349 -103788416 + L2 LINE L2 2745 3090 -223 1837 117 84 47 chr10 36528349 36528647 -103788118 - AluSg SINE Alu 0 310 2 400 305 145 48 chr10 36528647 36528710 -103788055 + L2 LINE L2 3090 3145 -168 280 171 0 29 chr10 36528716 36528786 -103787979 + CT-rich Low_complexity Low_complexity 2 69 0 1633 233 71 9 chr10 36529051 36529489 -103787276 - MLT1C LTR MaLR 0 467 3 1846 158 10 10 chr10 36529642 36529953 -103786812 + AluJo SINE Alu 1 311 -1 250 376 147 6 chr10 36530997 36531154 -103785611 + L3 LINE CR1 1396 1574 -3 1788 160 28 7 chr10 36531471 36531759 -103785006 + AluJo SINE Alu 5 298 -14 270 323 69 15 chr10 36533456 36533586 -103783179 + MER5B DNA MER1_type 7 143 -35 847 168 44 0 chr10 36533950 36534139 -103782626 + AluJb SINE Alu 141 335 0 1998 94 94 7 chr10 36535211 36535499 -103781266 + AluSq SINE Alu 1 313 0 2152 118 3 0 chr10 36537371 36537668 -103779097 + AluSq SINE Alu 1 298 -15 180 0 0 0 chr10 36537674 36537694 -103779071 + (CAA)n Simple_repeat Simple_repeat 2 21 0 418 225 7 196 chr10 36537864 36538033 -103778732 + MIR SINE MIR 18 117 -145 840 125 8 0 chr10 36538033 36538161 -103778604 - L1MA5A LINE L1 -3 6294 6166 418 225 7 196 chr10 36538161 36538267 -103778498 + MIR SINE MIR 117 241 -21 34 84 0 0 chr10 36538650 36538733 -103778032 + AT_rich Low_complexity Low_complexity 1 83 0 2304 106 0 3 chr10 36538882 36539193 -103777572 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr10 36540901 36540922 -103775843 + AT_rich Low_complexity Low_complexity 1 21 0 610 193 62 35 chr10 36540925 36541070 -103775695 - L1MC1 LINE L1 0 6333 6185 1051 48 42 6 chr10 36542430 36542595 -103774170 + (TTTC)n Simple_repeat Simple_repeat 2 172 0 783 138 0 9 chr10 36542595 36542704 -103774061 - FLAM_C SINE Alu -22 121 14 2056 155 5 39 chr10 36543332 36543719 -103773046 - MSTA LTR MaLR 0 428 55 650 131 0 10 chr10 36543720 36543819 -103772946 + MER4A LTR ERV1 1 98 -566 1711 117 177 76 chr10 36543819 36544186 -103772579 + MER4A LTR ERV1 261 664 0 392 121 17 0 chr10 36544186 36544241 -103772524 - MSTA LTR MaLR -370 56 1 1345 90 51 11 chr10 36544512 36544823 -103771942 - THE1C LTR MaLR 0 375 1 308 306 70 25 chr10 36544851 36545135 -103771630 - L2 LINE L2 -556 2758 2462 2104 159 22 75 chr10 36545317 36545733 -103771032 - MSTD LTR MaLR 0 396 3 430 228 0 22 chr10 36545788 36545880 -103770885 - Tigger5 DNA MER2_type 0 2323 2234 263 186 0 0 chr10 36545887 36545930 -103770835 - Tigger5 DNA MER2_type -2268 55 13 368 189 14 27 chr10 36545930 36546004 -103770761 - Tigger5 DNA MER2_type 0 2323 2251 320 196 0 18 chr10 36545972 36546028 -103770737 - Tigger5 DNA MER2_type -2268 55 1 * 817 192 51 75 chr10 36548300 36548372 -103768393 - MER3 DNA MER1_type 0 209 137 1694 173 3 7 chr10 36548372 36548656 -103768109 + AluJb SINE Alu 10 292 -20 817 192 51 75 chr10 36548656 36548797 -103767968 - MER3 DNA MER1_type -72 137 1 2091 109 20 14 chr10 36549014 36549308 -103767457 + AluSx SINE Alu 1 296 -16 2346 122 48 20 chr10 36549715 36550067 -103766698 + THE1B LTR MaLR 3 364 0 1463 168 35 48 chr10 36550093 36550408 -103766357 - AluJb SINE Alu 0 312 2 354 140 18 0 chr10 36551512 36551569 -103765196 - FLAM SINE Alu -8 125 68 802 203 0 0 chr10 36551570 36551698 -103765067 + AluJ SINE Alu 2 129 -183 253 291 23 0 chr10 36551698 36551784 -103764981 - L1MC4 LINE L1 -1342 6700 6613 311 301 0 0 chr10 36551812 36551895 -103764870 - L1MC4 LINE L1 -1340 6702 6620 2215 72 4 4 chr10 36551898 36552176 -103764589 - AluSp SINE Alu -34 279 2 939 134 82 29 chr10 36552222 36552393 -103764372 + AluJ SINE Alu 132 311 -1 484 153 0 0 chr10 36552401 36552473 -103764292 - AluJ/FLAM SINE Alu -232 80 9 2371 84 7 0 chr10 36553520 36553816 -103762949 - AluSx SINE Alu -14 298 1 1752 171 3 35 chr10 36554045 36554355 -103762410 + AluJb SINE Alu 1 300 -12 285 148 2 0 chr10 36554356 36554410 -103762355 + FLAM_A SINE Alu 81 128 -5 236 125 62 21 chr10 36554941 36554989 -103761776 - MER5A DNA MER1_type -62 127 78 1182 74 0 0 chr10 36554992 36555140 -103761625 - THE1B LTR MaLR -214 150 3 2630 105 14 14 chr10 36555568 36555930 -103760835 - THE1B LTR MaLR -2 362 1 252 131 77 12 chr10 36557407 36557575 -103759190 + (TA)n Simple_repeat Simple_repeat 2 180 0 247 35 0 0 chr10 36557634 36557663 -103759102 - Alu SINE Alu -195 107 79 186 107 54 0 chr10 36557713 36557769 -103758996 + (TA)n Simple_repeat Simple_repeat 2 60 0 249 61 41 20 chr10 36557788 36557837 -103758928 + (TA)n Simple_repeat Simple_repeat 2 51 0 247 35 0 0 chr10 36557852 36557881 -103758884 - Alu SINE Alu -195 107 79 414 113 0 0 chr10 36557943 36557996 -103758769 - AluJ/FLAM SINE Alu -249 63 11 192 259 293 26 chr10 36558291 36558407 -103758358 + MER5B DNA MER1_type 32 178 0 2619 154 18 37 chr10 36558615 36559010 -103757755 + MSTA LTR MaLR 1 389 -39 2162 141 0 0 chr10 36559010 36559322 -103757443 - AluSx SINE Alu 0 312 1 2619 154 18 37 chr10 36559322 36559362 -103757403 + MSTA LTR MaLR 389 428 0 900 152 0 0 chr10 36559572 36559710 -103757055 - FRAM SINE Alu -7 169 32 188 325 90 54 chr10 36560028 36560194 -103756571 + L2 LINE L2 2856 3027 -245 2751 165 6 30 chr10 36561471 36561688 -103755077 + LOR1b LTR ERV1 1 222 -239 1974 124 0 4 chr10 36561688 36561963 -103754802 - AluSx SINE Alu -10 302 29 2751 165 6 30 chr10 36561963 36562217 -103754548 + LOR1b LTR ERV1 222 461 0 779 205 87 19 chr10 36564779 36564940 -103751825 + FAM SINE Alu 1 172 -3 1266 116 0 0 chr10 36564940 36565113 -103751652 + L1MA1 LINE L1 5588 5760 -544 239 114 45 23 chr10 36565149 36565187 -103751578 - L1MA1 LINE L1 -545 5757 5718 4312 64 4 13 chr10 36565187 36565736 -103751029 + L1MA1 LINE L1 5759 6302 0 391 245 10 10 chr10 36565939 36566037 -103750728 + MER91B DNA MER1_type 32 129 -61 21 0 0 0 chr10 36566138 36566159 -103750606 + AT_rich Low_complexity Low_complexity 1 21 0 242 262 167 24 chr10 36566445 36566529 -103750236 + MIR3 SINE MIR 82 177 -31 3127 217 33 33 chr10 36566691 36567389 -103749376 - L1ME1 LINE L1 -23 6537 5836 2286 137 30 35 chr10 36567389 36567755 -103749010 - THE1B LTR MaLR 0 364 1 3127 217 33 33 chr10 36567755 36568401 -103748364 - L1ME1 LINE L1 -724 5836 5192 1337 239 87 9 chr10 36568390 36568818 -103747947 - L1ME1 LINE L1 -3626 2914 2455 * 432 277 10 0 chr10 36568859 36568960 -103747805 - L2 LINE L2 -36 3277 3176 3250 233 128 62 chr10 36569028 36570181 -103746584 - L1ME1 LINE L1 -5172 1371 142 414 256 31 0 chr10 36570183 36570312 -103746453 - L1MEc LINE L1 -4243 2153 2021 490 116 0 45 chr10 36570312 36570424 -103746341 + (TA)n Simple_repeat Simple_repeat 1 107 0 2269 76 0 7 chr10 36570424 36570736 -103746029 - AluSp SINE Alu 0 313 1 1981 254 67 24 chr10 36570736 36572541 -103744224 - L1MEc LINE L1 -4379 2017 113 * 4933 131 46 50 chr10 36572523 36572843 -103743922 - L1PA16 LINE L1 -3 6163 5843 1949 119 48 7 chr10 36572843 36573136 -103743629 + AluSq SINE Alu 1 305 -8 4933 131 46 50 chr10 36573136 36573388 -103743377 - L1PA16 LINE L1 -323 5843 5592 2139 116 7 0 chr10 36573388 36573680 -103743085 - AluSg SINE Alu -16 294 1 4933 131 46 50 chr10 36573680 36574014 -103742751 - L1PA16 LINE L1 -574 5592 5259 3029 84 17 0 chr10 36573988 36574393 -103742372 - L1PA10 LINE L1 -5 6163 5752 * 667 194 0 0 chr10 36574393 36574527 -103742238 + L1 LINE L1 5179 5312 -834 205 262 8 87 chr10 36574559 36574685 -103742080 - L2 LINE L2 -729 2585 2470 4651 218 14 8 chr10 36574741 36575777 -103740988 - L1PA16 LINE L1 -860 5286 4244 3786 139 4 0 chr10 36576643 36577168 -103739597 - MER1A DNA MER1_type 0 527 1 2121 124 0 3 chr10 36577236 36577526 -103739239 + AluSx SINE Alu 1 289 -23 1043 308 35 20 chr10 36578285 36578736 -103738029 + L1MC4a LINE L1 5533 5990 -1818 1701 180 31 0 chr10 36578746 36579035 -103737730 + AluJo SINE Alu 1 298 -14 31 68 0 0 chr10 36579152 36579211 -103737554 + AT_rich Low_complexity Low_complexity 1 59 0 1461 161 43 8 chr10 36580123 36580378 -103736387 + AluJb SINE Alu 28 291 -21 2579 188 128 67 chr10 36581172 36581950 -103734815 - LTR1B LTR ERV1 0 826 1 2196 249 4 8 chr10 36582242 36582727 -103734038 - MER21B LTR ERV1 -369 494 12 851 184 168 26 chr10 36582833 36583023 -103733742 - MER21B-int LTR ERV1 -52 4139 3923 1047 240 80 47 chr10 36583023 36583385 -103733380 - LTR40c LTR ERVL -58 407 34 3315 155 13 35 chr10 36583451 36583857 -103732908 - LTR26B LTR ERV1 0 531 135 2187 116 0 7 chr10 36583857 36584179 -103732586 + AluSq SINE Alu 1 320 0 3315 155 13 35 chr10 36584179 36584312 -103732453 - LTR26B LTR ERV1 -396 135 1 506 254 169 5 chr10 36584426 36584615 -103732150 - MIR SINE MIR -17 245 26 4770 79 55 43 chr10 36584914 36585113 -103731652 + L1MA2 LINE L1 5573 5768 -536 2318 134 61 3 chr10 36585113 36585457 -103731308 + THE1B LTR MaLR 1 364 0 4770 79 55 43 chr10 36585457 36585980 -103730785 + L1MA2 LINE L1 5768 6304 0 1878 207 158 58 chr10 36586596 36587313 -103729452 + LTR1B LTR ERV1 1 980 -40 1480 154 61 65 chr10 36587718 36587915 -103728850 - AluJo SINE Alu 0 316 119 186 103 0 0 chr10 36587915 36587944 -103728821 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1480 154 61 65 chr10 36587944 36588059 -103728706 - AluJo SINE Alu -197 119 5 2027 128 3 3 chr10 36588377 36588665 -103728100 - AluSx SINE Alu -24 288 1 21 0 0 0 chr10 36588985 36589006 -103727759 + AT_rich Low_complexity Low_complexity 1 21 0 580 246 31 52 chr10 36589301 36589492 -103727273 + MIR3 SINE MIR 19 205 -3 2813 130 9 7 chr10 36589827 36590258 -103726507 + L1MA3 LINE L1 5874 6305 0 1155 203 60 18 chr10 36592908 36593187 -103723578 - MER58B DNA MER1_type -9 332 1 2343 163 69 12 chr10 36593222 36593627 -103723138 - MSTC LTR MaLR 0 428 1 582 54 0 0 chr10 36594258 36594332 -103722433 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 1891 138 22 0 chr10 36594335 36594610 -103722155 - AluSq SINE Alu -32 281 1 184 333 120 19 chr10 36594763 36594871 -103721894 - MER5A DNA MER1_type -31 158 40 370 268 49 32 chr10 36595011 36595122 -103721643 + MIR SINE MIR 9 124 -138 4812 65 2 0 chr10 36595122 36595675 -103721090 + MER41A LTR ERV1 1 554 0 370 268 49 32 chr10 36595675 36595686 -103721079 + MIR SINE MIR 124 133 -129 571 130 30 0 chr10 36596326 36596419 -103720346 - L1PB1 LINE L1 -694 5457 5359 5189 97 21 8 chr10 36596419 36596774 -103719991 + L1PB1 LINE L1 5429 5778 -373 363 44 0 0 chr10 36596774 36596819 -103719946 + (CA)n Simple_repeat Simple_repeat 2 46 0 5189 97 21 8 chr10 36596819 36597172 -103719593 + L1PB1 LINE L1 5778 6147 -4 571 130 30 0 chr10 36597172 36597217 -103719548 - L1P5 LINE L1 -792 5359 5317 763 172 29 77 chr10 36597321 36597530 -103719235 + MER106A DNA MER1_type 35 233 -3 2162 117 0 10 chr10 36599245 36599544 -103717221 + AluSg SINE Alu 1 296 -14 234 0 0 0 chr10 36599728 36599754 -103717011 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 648 242 12 36 chr10 36603081 36603246 -103713519 - MER45A DNA AcHobo -2 176 16 2315 141 21 50 chr10 36603732 36603978 -103712787 - L1MA4A LINE L1 -7 6296 6065 1688 149 0 57 chr10 36603978 36604279 -103712486 + AluJo SINE Alu 11 294 -18 2315 141 21 50 chr10 36604279 36604452 -103712313 - L1MA4A LINE L1 -238 6065 5889 505 182 30 20 chr10 36604705 36604804 -103711961 + LTR24B LTR ERV1 4 103 -473 1572 55 92 37 chr10 36604860 36605078 -103711687 + MER30 DNA MER1_type 1 230 0 672 279 46 14 chr10 36605117 36605432 -103711333 + LTR24B LTR ERV1 145 569 0 2156 136 0 0 chr10 36606058 36606360 -103710405 + AluSx SINE Alu 1 302 -10 253 307 36 44 chr10 36607020 36607157 -103709608 + L3 LINE CR1 1416 1551 -26 215 196 39 0 chr10 36607160 36607211 -103709554 + GA-rich Low_complexity Low_complexity 2 54 0 26 30 0 0 chr10 36607409 36607442 -103709323 + AT_rich Low_complexity Low_complexity 1 33 0 717 275 48 70 chr10 36607894 36608265 -103708500 + L1ME4a LINE L1 5560 5922 -199 248 324 157 0 chr10 36608324 36608432 -103708333 + L2 LINE L2 3148 3272 0 3440 110 46 24 chr10 36608585 36609085 -103707680 - MER9 LTR ERVK 0 511 1 27 0 0 0 chr10 36609619 36609646 -103707119 + AT_rich Low_complexity Low_complexity 1 27 0 3007 83 3 0 chr10 36609883 36610246 -103706519 - THE1B LTR MaLR 0 364 1 237 222 74 49 chr10 36611425 36611506 -103705259 + MIR SINE MIR 19 101 -107 696 266 47 10 chr10 36611553 36611745 -103705020 + MIR SINE MIR 64 262 0 231 301 60 24 chr10 36611766 36611849 -103704916 + MIR3 SINE MIR 114 199 -9 1560 180 54 0 chr10 36611888 36612043 -103704722 - AluJo SINE Alu -19 293 148 189 0 0 0 chr10 36612043 36612064 -103704701 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1560 180 54 0 chr10 36612064 36612186 -103704579 - AluJo SINE Alu -164 148 1 2054 123 7 14 chr10 36612270 36612563 -103704202 + AluSx SINE Alu 1 291 -21 813 207 86 94 chr10 36613377 36613692 -103703073 - L2 LINE L2 -239 3074 2758 1046 219 13 26 chr10 36613701 36613780 -103702985 + AluJo SINE Alu 61 140 -172 2115 111 4 0 chr10 36613780 36614082 -103702683 + AluSc SINE Alu 1 303 0 1046 219 13 26 chr10 36614082 36614234 -103702531 + AluJo SINE Alu 140 290 -22 775 143 0 0 chr10 36614260 36614365 -103702400 - AluJo SINE Alu -44 268 164 751 173 0 0 chr10 36614373 36614483 -103702282 - AluJo SINE Alu -201 111 2 2234 287 95 35 chr10 36614490 36615652 -103701113 - L2 LINE L2 -568 2746 1516 2387 74 7 3 chr10 36616426 36616722 -103700043 + AluY SINE Alu 1 297 -14 2431 103 0 0 chr10 36616765 36617077 -103699688 - AluSq SINE Alu -1 312 1 561 297 73 82 chr10 36617806 36618381 -103698384 - L1ME4a LINE L1 -223 5898 5329 487 303 123 23 chr10 36618930 36619280 -103697485 - MLT1I LTR MaLR 0 409 25 6035 102 9 14 chr10 36619313 36620201 -103696564 - L1PB1 LINE L1 -1 6150 5267 227 384 42 5 chr10 36620566 36620782 -103695983 - L1ME4a LINE L1 -1178 4968 4745 2129 125 3 10 chr10 36620819 36621124 -103695641 - AluSx SINE Alu -9 303 1 364 349 99 54 chr10 36621379 36621782 -103694983 - L2 LINE L2 -229 3043 2627 1762 91 9 0 chr10 36621784 36622014 -103694751 - Charlie3 DNA MER1_type -5 2705 2474 1565 119 0 0 chr10 36622099 36622301 -103694464 - AluSg/x SINE Alu -16 296 95 186 43 0 0 chr10 36622455 36622478 -103694287 + (TC)n Simple_repeat Simple_repeat 2 24 0 2191 118 0 3 chr10 36622478 36622774 -103693991 - AluSx SINE Alu -17 295 1 409 265 60 13 chr10 36622965 36623116 -103693649 + MER103 DNA DNA 3 160 -6 12959 117 61 30 chr10 36623117 36624012 -103692753 - Tigger1 DNA MER2_type 0 2418 1553 2519 57 3 0 chr10 36624012 36624313 -103692452 - AluY SINE Alu -9 302 1 12959 117 61 30 chr10 36624313 36625156 -103691609 - Tigger1 DNA MER2_type -865 1553 738 2370 86 0 7 chr10 36625156 36625460 -103691305 - AluY SINE Alu -9 302 1 12959 117 61 30 chr10 36625460 36625787 -103690978 - Tigger1 DNA MER2_type -1680 738 423 2069 121 7 0 chr10 36625787 36626076 -103690689 + AluSx SINE Alu 5 295 -17 12959 117 61 30 chr10 36626076 36626335 -103690430 - Tigger1 DNA MER2_type -1995 423 3 729 198 0 0 chr10 36626361 36626482 -103690283 + FRAM SINE Alu 46 166 -10 210 316 44 21 chr10 36627763 36627863 -103688902 - MIR SINE MIR -63 145 45 1885 173 0 3 chr10 36628039 36628351 -103688414 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr10 36628913 36628934 -103687831 + AT_rich Low_complexity Low_complexity 1 21 0 860 86 13 26 chr10 36629651 36629802 -103686963 + (TTTC)n Simple_repeat Simple_repeat 2 150 0 243 276 0 0 chr10 36630315 36630373 -103686392 + L2 LINE L2 3247 3304 -9 1435 226 77 24 chr10 36630500 36630995 -103685770 - L1ME4a LINE L1 -3 6118 5598 2118 134 0 0 chr10 36631190 36631488 -103685277 + AluSx SINE Alu 1 298 -14 190 256 37 37 chr10 36631504 36631586 -103685179 + MIR SINE MIR 31 112 -150 894 276 105 44 chr10 36631624 36631849 -103684916 + MLT1J LTR MaLR 5 215 -296 2629 120 38 31 chr10 36631849 36632274 -103684491 + MSTA LTR MaLR 1 428 0 894 276 105 44 chr10 36632274 36632523 -103684242 + MLT1J LTR MaLR 215 508 -3 180 0 0 0 chr10 36633504 36633524 -103683241 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2104 131 0 0 chr10 36633527 36633810 -103682955 - AluSq SINE Alu -30 283 1 297 324 122 19 chr10 36634792 36635005 -103681760 + L2 LINE L2 1721 1955 -1359 3961 186 19 23 chr10 36635067 36635859 -103680906 - L1MB8 LINE L1 -6 6172 5384 864 258 22 0 chr10 36635861 36636136 -103680629 - L1MB8 LINE L1 -844 5302 5022 245 241 0 0 chr10 36636186 36636244 -103680521 + L1M4 LINE L1 5022 5079 -1067 400 210 0 0 chr10 36636248 36636329 -103680436 - L1MB8 LINE L1 -1125 5021 4941 1474 59 21 0 chr10 36636750 36636936 -103679829 + L1MA1 LINE L1 6112 6301 -1 247 327 39 10 chr10 36637261 36637365 -103679400 - L2 LINE L2 -1 3312 3206 1473 193 37 20 chr10 36639192 36639365 -103677400 - AluJo SINE Alu -12 300 118 208 0 0 59 chr10 36639365 36639399 -103677366 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1473 193 37 20 chr10 36639399 36639520 -103677245 - AluJo SINE Alu -194 118 1 195 129 0 0 chr10 36644230 36644261 -103672504 + (TG)n Simple_repeat Simple_repeat 2 32 0 4316 148 91 3 chr10 36645236 36645995 -103670770 - LTR1B LTR ERV1 0 826 1 1970 126 0 0 chr10 36648204 36648474 -103668291 - AluSg SINE Alu -2 308 39 1912 165 0 16 chr10 36648488 36648803 -103667962 - AluJo SINE Alu -2 310 1 188 246 66 49 chr10 36648945 36649006 -103667759 + MIR SINE MIR 76 137 -71 2400 92 0 7 chr10 36650035 36650339 -103666426 - AluSg SINE Alu -8 302 1 2533 69 0 0 chr10 36650365 36650669 -103666096 + AluY SINE Alu 1 304 -7 398 304 109 11 chr10 36650718 36650902 -103665863 + MIR SINE MIR 37 238 -24 4105 57 38 6 chr10 36651932 36652437 -103664328 - L1PA8 LINE L1 0 6172 5652 369 109 0 0 chr10 36652542 36652597 -103664168 + (CA)n Simple_repeat Simple_repeat 2 56 0 340 173 49 0 chr10 36652905 36652986 -103663779 + L1MB4 LINE L1 6095 6179 -1 4142 191 31 14 chr10 36653116 36653886 -103662879 - LTR39 LTR ERV1 0 783 1 666 214 0 7 chr10 36654278 36654553 -103662212 + (TCCA)n Simple_repeat Simple_repeat 1 272 0 1407 184 74 13 chr10 36654582 36654881 -103661884 + LTR52 LTR ERVL 102 418 -3 403 307 21 37 chr10 36655374 36655563 -103661202 - MLT1K LTR MaLR 0 588 403 895 181 0 0 chr10 36655841 36655974 -103660791 + FLAM_A SINE Alu 1 133 0 2866 114 13 37 chr10 36656478 36656694 -103660071 + L1MA4A LINE L1 5854 6074 -229 2229 129 0 0 chr10 36656694 36657003 -103659762 - AluSx SINE Alu -3 309 1 2866 114 13 37 chr10 36657003 36657240 -103659525 + L1MA4A LINE L1 6074 6296 -7 1485 168 6 128 chr10 36657262 36657589 -103659176 + AluJb SINE Alu 1 287 -15 2574 118 34 34 chr10 36659242 36659442 -103657323 - L1MA8 LINE L1 -5 6286 6087 2344 86 7 0 chr10 36659442 36659743 -103657022 - AluSx SINE Alu -5 307 5 2574 118 34 34 chr10 36659743 36659981 -103656784 - L1MA8 LINE L1 -203 6088 5848 2288 136 33 25 chr10 36660047 36660408 -103656357 - THE1B LTR MaLR 0 364 1 324 163 5 0 chr10 36660581 36660642 -103656123 + MIR SINE MIR 97 160 -48 2319 89 0 3 chr10 36660729 36661033 -103655732 + AluY SINE Alu 1 303 -8 2641 190 17 0 chr10 36661348 36661821 -103654944 + MLT2B1 LTR ERVL 1 481 -39 1057 160 5 5 chr10 36661821 36662008 -103654757 + MLT1A1 LTR MaLR 1 187 -178 3881 124 71 57 chr10 36662009 36662158 -103654607 - MER50 LTR ERV1 -23 711 566 1537 202 10 24 chr10 36662158 36662296 -103654469 + AluJb SINE Alu 1 139 -175 429 36 0 0 chr10 36662296 36662351 -103654414 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 1537 202 10 24 chr10 36662351 36662530 -103654235 + AluJb SINE Alu 139 314 0 3881 124 71 57 chr10 36662530 36663078 -103653687 - MER50 LTR ERV1 -168 566 1 983 192 16 22 chr10 36663079 36663261 -103653504 + MLT1A1 LTR MaLR 185 365 0 226 210 34 143 chr10 36663336 36663396 -103653369 + MIR SINE MIR 42 84 -178 1996 139 14 0 chr10 36663396 36663691 -103653074 - AluSg SINE Alu -11 299 1 226 210 34 143 chr10 36663691 36663749 -103653016 + MIR SINE MIR 84 147 -115 2122 125 6 10 chr10 36663753 36664065 -103652700 - AluSq SINE Alu -2 311 1 2447 214 91 12 chr10 36665701 36666298 -103650467 - LTR48B LTR ERV1 0 644 1 246 279 15 15 chr10 36666879 36666947 -103649818 + tRNA-Ile-ATT tRNA tRNA 5 72 -5 258 32 0 0 chr10 36667571 36667602 -103649163 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1989 151 0 0 chr10 36667605 36667889 -103648876 - AluSx SINE Alu -28 284 1 1796 169 0 10 chr10 36667929 36668230 -103648535 - AluJb SINE Alu -14 298 1 7023 55 0 81 chr10 36668273 36669705 -103647060 + L1PA7 LINE L1 4800 6153 -1 1547 147 74 53 chr10 36671002 36671141 -103645624 + LTR8A LTR ERV1 1 136 -591 413 76 15 0 chr10 36671141 36671207 -103645558 + (TA)n Simple_repeat Simple_repeat 2 68 0 2031 140 7 0 chr10 36671207 36671492 -103645273 - AluSx SINE Alu -23 289 3 2153 124 0 3 chr10 36671498 36671796 -103644969 - AluSq SINE Alu -16 297 1 1547 147 74 53 chr10 36671796 36672282 -103644483 + LTR8A LTR ERV1 140 727 0 25 31 0 0 chr10 36672454 36672486 -103644279 + AT_rich Low_complexity Low_complexity 1 32 0 234 357 24 0 chr10 36672506 36672590 -103644175 + MIR3 SINE MIR 114 199 -9 2344 106 0 6 chr10 36672798 36673109 -103643656 - AluSx SINE Alu -3 309 1 442 158 0 13 chr10 36673117 36673193 -103643572 - Alu SINE Alu -2 309 235 1067 124 0 11 chr10 36673196 36673281 -103643484 + (GAAA)n Simple_repeat Simple_repeat 1 260 0 1067 124 0 11 chr10 36673281 36673459 -103643306 + (GAAA)n Simple_repeat Simple_repeat 3 178 0 297 310 168 61 chr10 36673547 36673636 -103643129 - L2 LINE L2 -448 2866 2788 2050 148 0 7 chr10 36673636 36673941 -103642824 + AluJb SINE Alu 1 303 -9 297 310 168 61 chr10 36673941 36674671 -103642094 - L2 LINE L2 -526 2788 1959 6093 117 16 27 chr10 36674797 36675710 -103641055 + MER4D LTR ERV1 1 903 0 2391 99 0 3 chr10 36675760 36676072 -103640693 + AluSq SINE Alu 1 311 -2 570 238 2 2 chr10 36676382 36676794 -103639971 + CT-rich Low_complexity Low_complexity 1 412 0 1565 200 10 0 chr10 36677354 36677644 -103639121 - AluJo SINE Alu -19 293 1 685 240 72 87 chr10 36678038 36678384 -103638381 + MER102b DNA MER1_type 1 341 0 1209 162 121 62 chr10 36678478 36678750 -103638015 + AluJo SINE Alu 5 292 -20 303 290 130 0 chr10 36679037 36679137 -103637628 - MER117 DNA MER1_type -51 146 34 230 293 46 81 chr10 36679303 36679477 -103637288 + L3 LINE CR1 795 962 -615 2293 90 0 0 chr10 36680161 36680460 -103636305 + AluSq SINE Alu 1 299 -14 1865 94 0 42 chr10 36680826 36680949 -103635816 + L1MA1 LINE L1 6027 6154 -148 1519 96 50 5 chr10 36680949 36681168 -103635597 + MER30 DNA MER1_type 2 230 0 1865 94 0 42 chr10 36681168 36681332 -103635433 + L1MA1 LINE L1 6154 6302 0 27 0 0 0 chr10 36681332 36681359 -103635406 + AT_rich Low_complexity Low_complexity 1 27 0 285 29 0 0 chr10 36681798 36681832 -103634933 + (CA)n Simple_repeat Simple_repeat 1 34 0 245 108 27 0 chr10 36682529 36682566 -103634199 + Alu SINE Alu 124 161 -14 216 0 0 0 chr10 36683134 36683158 -103633607 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1283 202 49 0 chr10 36683162 36683310 -103633455 - AluJo SINE Alu -32 280 141 180 111 0 0 chr10 36683310 36683337 -103633428 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1283 202 49 0 chr10 36683337 36683455 -103633310 - AluJo SINE Alu -171 141 1 180 111 0 0 chr10 36683458 36683485 -103633280 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 663 148 9 0 chr10 36683491 36683599 -103633166 - FLAM_A SINE Alu -30 112 4 337 179 60 12 chr10 36683929 36684013 -103632752 + MLT2B3 LTR ERVL 6 93 -461 1943 183 55 103 chr10 36684050 36684591 -103632174 + MLT2B1 LTR ERVL 6 520 0 3149 98 18 16 chr10 36684658 36685108 -103631657 - L1PA11 LINE L1 -2 6172 5722 290 306 60 37 chr10 36685113 36685247 -103631518 - MIR SINE MIR -123 139 3 199 246 70 53 chr10 36686069 36686126 -103630639 - MIR SINE MIR -57 151 94 183 205 0 0 chr10 36686318 36686357 -103630408 + (CA)n Simple_repeat Simple_repeat 2 40 0 2059 110 0 19 chr10 36686430 36686738 -103630027 - AluSx SINE Alu -10 302 1 21 71 0 0 chr10 36686965 36687007 -103629758 + AT_rich Low_complexity Low_complexity 1 42 0 256 216 216 102 chr10 36688399 36688723 -103628042 + MLT1K LTR MaLR 219 579 -9 1271 237 127 29 chr10 36689315 36689732 -103627033 + MLT1J LTR MaLR 1 458 -53 225 0 0 0 chr10 36689732 36689757 -103627008 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 798 217 0 0 chr10 36689759 36689902 -103626863 - FRAM SINE Alu -30 146 4 2173 106 0 7 chr10 36690301 36690603 -103626162 - AluSx SINE Alu -12 300 1 428 265 47 77 chr10 36691244 36691303 -103625462 + MIR SINE MIR 41 100 -162 1733 138 0 51 chr10 36691303 36691614 -103625151 - AluSx SINE Alu -17 295 1 428 265 47 77 chr10 36691614 36691724 -103625041 + MIR SINE MIR 100 205 -57 1367 203 13 16 chr10 36691732 36692037 -103624728 + AluJb SINE Alu 1 304 -8 1540 170 3 20 chr10 36693147 36693441 -103623324 - AluJb SINE Alu -23 289 1 1013 131 0 19 chr10 36693529 36693689 -103623076 + FRAM SINE Alu 16 172 -4 236 180 80 0 chr10 36695109 36695159 -103621606 + L2 LINE L2 3251 3304 -9 728 223 159 51 chr10 36695640 36695936 -103620829 + MER57A LTR ERV1 59 386 -17 691 197 0 0 chr10 36695937 36696054 -103620711 + FLAM_C SINE Alu 15 131 -12 1760 169 13 0 chr10 36696537 36696845 -103619920 - AluJo SINE Alu 0 312 1 8734 117 87 23 chr10 36698057 36699539 -103617226 + pTR5 LTR ERV1 504 8396 -3 340 206 51 61 chr10 36699539 36699637 -103617128 + LTR30 LTR ERV1 375 624 -98 1514 134 0 5 chr10 36699641 36699864 -103616901 + pTR5 LTR ERV1 173 394 -2044 705 199 0 15 chr10 36699879 36700010 -103616755 - FLAM_C SINE Alu -2 131 3 1754 163 17 3 chr10 36700016 36700305 -103616460 - AluJb SINE Alu -19 293 1 1968 131 7 0 chr10 36700309 36700606 -103616159 - AluSq SINE Alu -14 299 1 369 329 41 20 chr10 36700731 36700877 -103615888 - MER5A DNA MER1_type -1 188 40 * 605 259 6 19 chr10 36700747 36700905 -103615860 + MER5A DNA MER1_type 34 189 0 203 146 0 42 chr10 36700957 36701005 -103615760 + (TAAAAA)n Simple_repeat Simple_repeat 3 48 0 2270 100 3 0 chr10 36701219 36701530 -103615235 - AluSx SINE Alu 0 312 1 414 231 22 52 chr10 36701678 36701812 -103614953 + L1MC4 LINE L1 7783 7912 -130 216 184 0 0 chr10 36701816 36701865 -103614900 + (CATATA)n Simple_repeat Simple_repeat 3 51 0 1275 187 97 8 chr10 36701911 36702179 -103614586 + AluJo SINE Alu 1 292 -20 990 149 12 6 chr10 36702180 36702341 -103614424 + AluJo/FRAM SINE Alu 134 295 -17 22 0 0 0 chr10 36702409 36702431 -103614334 + AT_rich Low_complexity Low_complexity 1 22 0 2121 116 0 16 chr10 36702665 36702976 -103613789 - AluSg SINE Alu -4 306 1 1632 194 167 12 chr10 36703893 36704173 -103612592 + MLT1D LTR MaLR 3 238 -267 2189 92 16 0 chr10 36704173 36704478 -103612287 + AluSq SINE Alu 1 310 -3 1632 194 167 12 chr10 36704478 36704629 -103612136 + MLT1D LTR MaLR 238 501 -4 1641 181 0 7 chr10 36704710 36704992 -103611773 + AluJo SINE Alu 17 296 -16 2065 126 0 0 chr10 36705420 36705730 -103611035 + AluSx SINE Alu 1 310 -2 1740 168 0 3 chr10 36705757 36706064 -103610701 + AluJb SINE Alu 1 306 0 193 145 116 58 chr10 36706468 36706537 -103610228 - L2 LINE L2 -76 3237 3165 1651 182 0 25 chr10 36706945 36707264 -103609501 - AluJo SINE Alu -1 311 1 1606 150 66 3 chr10 36707589 36707876 -103608889 + AluSx SINE Alu 1 305 -7 5827 72 18 6 chr10 36708222 36708998 -103607767 - L1PA10 LINE L1 -11 6157 5373 842 132 29 0 chr10 36712583 36712719 -103604046 + L1MA3 LINE L1 6166 6305 0 2066 111 6 43 chr10 36713749 36714073 -103602692 + AluSq SINE Alu 1 312 -1 875 82 8 0 chr10 36714238 36714372 -103602393 + (TTGG)n Simple_repeat Simple_repeat 1 135 0 363 240 23 16 chr10 36715089 36715218 -103601547 + (CAAA)n Simple_repeat Simple_repeat 2 131 0 2706 216 201 72 chr10 36715218 36715733 -103601032 + L1MC4 LINE L1 6487 6934 -1108 2495 129 36 17 chr10 36715733 36716151 -103600614 + MSTA LTR MaLR 1 426 -2 2706 216 201 72 chr10 36716151 36716717 -103600048 + L1MC4 LINE L1 6934 7426 -616 4243 69 4 0 chr10 36716717 36717256 -103599509 - L1PA6 LINE L1 -2 6152 5612 2706 216 201 72 chr10 36717256 36717363 -103599402 + L1MC4 LINE L1 7426 7518 -524 1790 140 0 0 chr10 36717363 36717670 -103599095 + AluJo SINE Alu 5 311 0 2706 216 201 72 chr10 36717670 36717743 -103599022 + L1MC4 LINE L1 7518 7914 -128 302 219 8 118 chr10 36718242 36718361 -103598404 - MIR SINE MIR -77 185 80 812 150 53 0 chr10 36718371 36718504 -103598261 + AluJo SINE Alu 14 153 -159 4087 129 73 91 chr10 36718504 36719476 -103597289 + pTR5 LTR ERV1 743 2025 -413 383 198 0 0 chr10 36719476 36719557 -103597208 + LTR30 LTR ERV1 544 624 -98 1581 91 5 5 chr10 36719577 36719798 -103596967 + pTR5 LTR ERV1 172 392 -2046 694 177 0 23 chr10 36719809 36719939 -103596826 + FRAM SINE Alu 42 168 -8 1631 169 3 10 chr10 36720461 36720751 -103596014 - AluJo SINE Alu -24 288 1 321 315 0 0 chr10 36721163 36721252 -103595513 - L2 LINE L2 0 3272 3184 1706 85 31 0 chr10 36721678 36721901 -103594864 - MER30 DNA MER1_type 0 230 1 1889 153 16 3 chr10 36722643 36722950 -103593815 + AluSx SINE Alu 1 311 -1 526 195 141 16 chr10 36722991 36723152 -103593613 - MER5A DNA MER1_type -1 188 5 2128 121 0 0 chr10 36723544 36723842 -103592923 - AluSx SINE Alu -10 302 5 208 0 62 0 chr10 36724137 36724169 -103592596 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 864 127 0 0 chr10 36724173 36724291 -103592474 - FLAM_C SINE Alu -15 118 1 567 275 144 0 chr10 36724611 36724771 -103591994 + MER5A DNA MER1_type 7 189 0 344 272 141 28 chr10 36725693 36725906 -103590859 + L1MEd LINE L1 659 895 -5310 487 281 100 40 chr10 36725942 36726200 -103590565 + L1MEd LINE L1 1139 1380 -5016 5231 55 3 0 chr10 36726200 36726837 -103589928 + L1PA7 LINE L1 5515 6153 -1 487 281 100 40 chr10 36726837 36727059 -103589706 + L1MEd LINE L1 1380 1648 -4748 340 192 202 10 chr10 36727212 36727311 -103589454 - MER5C DNA MER1_type -200 124 7 2078 138 39 33 chr10 36728483 36728845 -103587920 + THE1B LTR MaLR 1 364 0 229 267 0 83 chr10 36729440 36729560 -103587205 - LTR67 LTR ERVL -13 544 435 2121 121 0 30 chr10 36729564 36729869 -103586896 + AluSq SINE Alu 11 306 -7 1454 215 3 29 chr10 36730088 36730400 -103586365 - AluJo SINE Alu -8 304 1 36765 101 15 9 chr10 36730633 36736747 -103580018 + L1PA7 LINE L1 11 6154 0 1876 159 26 7 chr10 36736760 36737251 -103579514 + AluJb SINE Alu 1 497 0 516 275 142 32 chr10 36738012 36738449 -103578316 + MLT1J LTR MaLR 6 510 -1 1783 189 0 13 chr10 36739305 36739618 -103577147 + AluJb SINE Alu 1 309 -3 2168 123 29 9 chr10 36739633 36739975 -103576790 + MLT1A1 LTR MaLR 15 363 -2 291 297 22 0 chr10 36739987 36740078 -103576687 - MLT1L LTR MaLR -49 566 474 225 245 38 0 chr10 36740222 36740275 -103576490 - MLT1L LTR MaLR -356 259 205 437 129 0 0 chr10 36740660 36740722 -103576043 + AluS SINE Alu 5 66 -247 338 129 94 47 chr10 36740872 36740957 -103575808 + LTR67 LTR ERVL 462 550 -7 206 316 79 0 chr10 36742796 36742872 -103573893 + L2 LINE L2 3191 3272 -41 860 136 38 0 chr10 36743252 36743384 -103573381 + AluSg/x SINE Alu 101 237 -73 1748 213 54 26 chr10 36745522 36745789 -103570976 + L1ME2 LINE L1 5504 5791 -373 2122 132 0 0 chr10 36745789 36746102 -103570663 + AluSx SINE Alu 1 313 0 1748 213 54 26 chr10 36746102 36746255 -103570510 + L1ME2 LINE L1 5791 5938 -226 813 148 0 16 chr10 36746259 36746387 -103570378 + FLAM_C SINE Alu 1 126 -17 1696 80 0 4 chr10 36746416 36746641 -103570124 + L1PA8 LINE L1 5948 6171 -1 23 68 0 0 chr10 36746641 36746685 -103570080 + AT_rich Low_complexity Low_complexity 1 44 0 656 262 19 12 chr10 36746685 36746933 -103569832 + L1MA10 LINE L1 5922 6327 -5 198 313 87 70 chr10 36746947 36747247 -103569518 + L2 LINE L2 2968 3272 0 1875 129 0 0 chr10 36747263 36747543 -103569222 + L1PA14 LINE L1 5882 6161 0 735 69 0 0 chr10 36747627 36747729 -103569036 + (TGGA)n Simple_repeat Simple_repeat 4 105 0 226 266 25 0 chr10 36749151 36749230 -103567535 - MER69A DNA AcHobo -7 170 90 2039 137 16 7 chr10 36749231 36749715 -103567050 + AluSx SINE Alu 1 312 0 254 194 16 0 chr10 36749717 36749779 -103566986 + GA-rich Low_complexity Low_complexity 1 63 0 385 228 168 0 chr10 36749781 36749882 -103566883 - MER69A DNA AcHobo -59 118 1 782 240 70 25 chr10 36750427 36750652 -103566113 + MIR SINE MIR 10 248 -14 2506 39 0 30 chr10 36750652 36750957 -103565808 - AluY SINE Alu -15 296 1 782 240 70 25 chr10 36750957 36750973 -103565792 + MIR SINE MIR 248 262 0 1903 116 0 84 chr10 36751272 36751592 -103565173 + AluSx SINE Alu 1 293 -19 233 280 120 16 chr10 36751829 36751954 -103564811 + MIR SINE MIR 92 229 -33 500 130 0 0 chr10 36752758 36752827 -103563938 + AluS SINE Alu 6 74 -238 2320 89 3 13 chr10 36752848 36753162 -103563603 + AluY SINE Alu 1 311 0 2478 86 0 0 chr10 36754514 36754818 -103561947 - AluSx SINE Alu -8 304 1 685 273 36 5 chr10 36754851 36755045 -103561720 - MIR SINE MIR -62 200 1 254 56 0 0 chr10 36755697 36755733 -103561032 - L2 LINE L2 -4 3309 3274 4644 236 46 79 chr10 36757332 36759746 -103557019 + L1M3a LINE L1 251 2744 -3290 2400 80 0 3 chr10 36759746 36760046 -103556719 + AluY SINE Alu 1 299 -12 4644 236 46 79 chr10 36760046 36760981 -103555784 + L1M3a LINE L1 2744 3239 -2795 1142 166 80 140 chr10 36760981 36761330 -103555435 - MER7A DNA MER2_type -20 326 1 4644 236 46 79 chr10 36761330 36761989 -103554776 + L1M3a LINE L1 3239 3918 -2116 1142 226 55 43 chr10 36762202 36762529 -103554236 - LTR43 LTR ERV1 -140 462 132 279 162 44 15 chr10 36762638 36762706 -103554059 - LTR60 LTR ERV1 -516 70 1 890 149 0 19 chr10 36762706 36762860 -103553905 + L1M3a LINE L1 3957 4107 -1927 1052 164 11 11 chr10 36762860 36763043 -103553722 - LTR45B LTR ERV1 -272 217 35 261 57 0 0 chr10 36763097 36763132 -103553633 + (CA)n Simple_repeat Simple_repeat 2 36 0 562 280 69 34 chr10 36763132 36763510 -103553255 - L1ME4a LINE L1 -157 5964 5574 1681 170 72 0 chr10 36763570 36763847 -103552918 - AluJo SINE Alu -15 297 1 834 118 17 0 chr10 36764023 36764142 -103552623 - AluJb SINE Alu -191 121 1 185 271 0 34 chr10 36764147 36764206 -103552559 + L2 LINE L2 3186 3242 -30 201 74 0 0 chr10 36764208 36764235 -103552530 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 284 321 134 34 chr10 36764554 36765031 -103551734 + L2 LINE L2 390 914 -2400 264 59 0 0 chr10 36765175 36765209 -103551556 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 47 47 0 12 chr10 36766716 36766782 -103549983 + AT_rich Low_complexity Low_complexity 1 67 -18 2032 131 14 0 chr10 36766782 36766941 -103549824 - AluSx SINE Alu -25 287 121 234 0 0 0 chr10 36766941 36766967 -103549798 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2032 131 14 0 chr10 36766967 36767090 -103549675 - AluSx SINE Alu -191 121 1 47 47 0 12 chr10 36767090 36767109 -103549656 + AT_rich Low_complexity Low_complexity 67 85 0 1571 157 45 11 chr10 36767110 36767377 -103549388 - AluJo SINE Alu -22 290 15 197 180 80 0 chr10 36767601 36767651 -103549114 + MIR SINE MIR 88 141 -121 229 83 0 56 chr10 36768915 36768951 -103547814 + U2 snRNA snRNA 1 34 -154 2031 143 7 0 chr10 36769128 36769421 -103547344 + AluSx SINE Alu 1 295 -17 315 203 0 0 chr10 36770588 36770657 -103546108 + LTR58 LTR ERV1 361 429 -250 1511 75 58 40 chr10 36770694 36770920 -103545845 + MER30 DNA MER1_type 1 230 0 24 0 0 0 chr10 36772609 36772633 -103544132 + AT_rich Low_complexity Low_complexity 1 24 0 214 292 31 0 chr10 36774796 36774861 -103541904 - L2 LINE L2 -1 3271 3205 396 88 0 0 chr10 36776641 36776698 -103540067 + (CA)n Simple_repeat Simple_repeat 2 58 0 585 293 46 0 chr10 36776830 36777050 -103539715 + MIR SINE MIR 12 239 -23 1880 168 0 16 chr10 36777121 36777430 -103539335 + AluJb SINE Alu 3 306 -6 1908 160 0 3 chr10 36777496 36777789 -103538976 - AluSx SINE Alu -20 292 1 857 177 165 37 chr10 36778601 36778844 -103537921 + L1MA7 LINE L1 6008 6281 -10 1829 155 7 0 chr10 36778849 36779152 -103537613 - AluY SINE Alu -4 307 3 186 193 0 0 chr10 36779313 36779370 -103537395 + A-rich Low_complexity Low_complexity 1 57 0 206 316 79 0 chr10 36780723 36780799 -103535966 + L2 LINE L2 3191 3272 -41 1178 160 27 0 chr10 36781178 36781366 -103535399 + AluSg/x SINE Alu 103 295 -17 315 203 0 0 chr10 36782533 36782602 -103534163 + LTR58 LTR ERV1 361 429 -250 1481 76 62 40 chr10 36782639 36782864 -103533901 + MER30 DNA MER1_type 1 230 0 24 0 0 0 chr10 36784550 36784574 -103532191 + AT_rich Low_complexity Low_complexity 1 24 0 214 292 31 0 chr10 36786737 36786802 -103529963 - L2 LINE L2 -1 3271 3205 378 91 0 0 chr10 36788583 36788638 -103528127 + (CA)n Simple_repeat Simple_repeat 2 56 0 585 293 46 0 chr10 36788770 36788990 -103527775 + MIR SINE MIR 12 239 -23 1822 172 3 16 chr10 36789061 36789369 -103527396 + AluJb SINE Alu 3 306 -6 1879 158 3 3 chr10 36789435 36789727 -103527038 - AluSx SINE Alu -20 292 1 842 178 166 37 chr10 36790539 36790780 -103525985 + L1MA7 LINE L1 6008 6279 -12 2521 69 3 0 chr10 36790788 36791093 -103525672 - AluY SINE Alu -5 306 1 31 0 0 0 chr10 36791093 36791124 -103525641 + AT_rich Low_complexity Low_complexity 1 31 0 2078 129 3 0 chr10 36792711 36792998 -103523767 + AluSx SINE Alu 1 288 -24 237 216 259 11 chr10 36793032 36793166 -103523599 + MIR SINE MIR 5 174 -34 1864 151 11 3 chr10 36793441 36793726 -103523039 - AluJb SINE Alu -25 287 1 1770 144 70 30 chr10 36795085 36795384 -103521381 - AluJo SINE Alu 0 312 2 26 0 0 0 chr10 36795507 36795533 -103521232 + AT_rich Low_complexity Low_complexity 1 26 0 1537 163 0 8 chr10 36795925 36796165 -103520600 + AluJo SINE Alu 72 309 -3 21 0 0 0 chr10 36798482 36798503 -103518262 + AT_rich Low_complexity Low_complexity 1 21 0 1546 141 55 52 chr10 36798509 36798799 -103517966 - AluJo SINE Alu -4 308 18 2314 87 7 3 chr10 36800144 36800442 -103516323 - AluSg SINE Alu -11 299 1 259 284 134 0 chr10 36802545 36802672 -103514093 + L2 LINE L2 3165 3308 -5 2215 172 23 47 chr10 36803270 36803713 -103513052 + Tigger2a DNA MER2_type 1 432 -2 191 229 0 0 chr10 36803861 36803896 -103512869 - L3b LINE CR1 -15 1568 1534 831 254 0 0 chr10 36803905 36804094 -103512671 - MER5A DNA MER1_type 0 189 1 2084 147 0 0 chr10 36804224 36804530 -103512235 - AluSx SINE Alu -6 306 1 1328 148 163 44 chr10 36804786 36805056 -103511709 - AluJo SINE Alu 0 302 1 1781 176 3 10 chr10 36805866 36806161 -103510604 + AluJo SINE Alu 1 293 -19 337 330 34 62 chr10 36807329 36807398 -103509367 - MIR SINE MIR -56 206 137 192 97 0 0 chr10 36807398 36807429 -103509336 + (CCCA)n Simple_repeat Simple_repeat 3 33 0 337 330 34 62 chr10 36807429 36807568 -103509197 - MIR SINE MIR -125 137 4 3858 163 117 21 chr10 36807747 36808501 -103508264 + LTR1B LTR ERV1 1 826 0 348 290 58 58 chr10 36810818 36810993 -103505772 - MER5A DNA MER1_type 0 178 10 325 252 203 0 chr10 36811020 36811143 -103505622 - Charlie8 DNA MER1_type -2228 189 42 1121 242 71 24 chr10 36812082 36812183 -103504582 + MLT1E LTR MaLR 1 96 -497 557 110 10 40 chr10 36812183 36812283 -103504482 - L1PA11 LINE L1 -3 6171 6075 1121 242 71 24 chr10 36812283 36812662 -103504103 + MLT1E LTR MaLR 96 592 -1 225 217 0 0 chr10 36812679 36812725 -103504040 + MLT1I LTR MaLR 98 143 -266 1792 159 33 0 chr10 36817350 36817652 -103499113 + AluJo SINE Alu 1 312 0 455 122 11 0 chr10 36817687 36817777 -103498988 + (GGAA)n Simple_repeat Simple_repeat 4 94 0 22 56 0 0 chr10 36820274 36820310 -103496455 + GC_rich Low_complexity Low_complexity 1 36 0 1849 286 123 49 chr10 36820530 36820619 -103496146 + L2 LINE L2 1570 1651 -1662 1609 177 44 0 chr10 36820619 36820913 -103495852 - AluJo SINE Alu -4 308 2 1849 286 123 49 chr10 36820913 36822267 -103494498 + L2 LINE L2 1651 3115 -198 263 297 137 22 chr10 36822461 36822643 -103494122 + LTR16C LTR ERVL 82 284 -207 489 234 102 15 chr10 36822775 36822972 -103493793 + LTR16C LTR ERVL 278 491 0 2478 54 0 10 chr10 36823003 36823299 -103493466 + AluY SINE Alu 1 293 -18 298 117 0 52 chr10 36823637 36823714 -103493051 + (GGAA)n Simple_repeat Simple_repeat 2 74 0 2052 108 38 11 chr10 36824070 36824376 -103492389 + AluSc SINE Alu 1 309 0 536 230 59 32 chr10 36825608 36825795 -103490970 - HAL1 LINE L1 -146 2361 2170 2032 282 68 40 chr10 36825967 36826218 -103490547 - HAL1 LINE L1 -790 1717 1475 315 0 0 0 chr10 36826218 36826253 -103490512 + (TA)n Simple_repeat Simple_repeat 1 35 0 2032 282 68 40 chr10 36826253 36827070 -103489695 - HAL1 LINE L1 -1032 1475 619 31 76 0 0 chr10 36828701 36828767 -103487998 + AT_rich Low_complexity Low_complexity 1 66 0 327 237 125 7 chr10 36829988 36830140 -103486625 - MER104 DNA Tc2 -10 170 1 456 294 43 18 chr10 36831274 36831437 -103485328 - L2 LINE L2 -994 2320 2154 22 0 0 0 chr10 36832442 36832464 -103484301 + AT_rich Low_complexity Low_complexity 1 22 0 1838 184 20 3 chr10 36833261 36833603 -103483162 - MER7A DNA MER2_type 0 346 1 435 301 46 31 chr10 36833882 36834078 -103482687 - MIR3 SINE MIR 0 208 10 626 169 0 85 chr10 36834134 36834264 -103482501 - AluJo/FRAM SINE Alu -21 291 173 395 208 0 0 chr10 36834265 36834337 -103482428 - AluJ/FLAM SINE Alu -230 72 1 299 303 83 28 chr10 36835928 36836037 -103480728 - L2 LINE L2 -19 3253 3139 458 301 56 44 chr10 36836292 36836611 -103480154 + HAL1 LINE L1 5 327 -2180 351 0 0 0 chr10 36836695 36836734 -103480031 + (TG)n Simple_repeat Simple_repeat 2 40 0 26 0 0 0 chr10 36836737 36836763 -103480002 + AT_rich Low_complexity Low_complexity 1 26 0 1686 164 47 0 chr10 36837148 36837423 -103479342 - AluJo SINE Alu -24 288 1 299 307 65 84 chr10 36838272 36838487 -103478278 + L2 LINE L2 3061 3271 -1 298 282 72 20 chr10 36838928 36839123 -103477642 + MER112 DNA MER1_type 8 212 -48 713 190 7 7 chr10 36839135 36839272 -103477493 + FLAM_C SINE Alu 7 143 0 830 217 25 0 chr10 36839697 36839895 -103476870 + MER3 DNA MER1_type 2 204 -5 191 345 17 0 chr10 36840231 36840289 -103476476 + MIR SINE MIR 45 103 -105 575 247 135 18 chr10 36840729 36840899 -103475866 - MIR SINE MIR -16 246 57 1868 148 50 13 chr10 36842006 36842304 -103474461 + AluJo SINE Alu 1 309 -3 369 211 56 56 chr10 36842544 36842785 -103473980 + MER41E LTR ERV1 55 430 -205 247 206 0 16 chr10 36843079 36843142 -103473623 + LTR28 LTR ERV1 1 62 -958 * 1734 167 23 27 chr10 36843109 36843524 -103473241 + MER61D LTR ERV1 14 501 0 192 362 58 0 chr10 36843580 36843649 -103473116 - L2 LINE L2 -39 3233 3161 609 217 47 0 chr10 36844608 36844737 -103472028 - MER58B DNA MER1_type -9 332 198 328 308 121 27 chr10 36846139 36846363 -103470402 - L3b LINE CR1 -237 1346 1102 1578 165 7 62 chr10 36847365 36847674 -103469091 + AluJo SINE Alu 1 292 -20 451 326 70 27 chr10 36850547 36850734 -103466031 + L3b LINE CR1 1284 1478 -105 195 295 11 53 chr10 36850743 36850838 -103465927 - L2 LINE L2 -640 2674 2584 1903 147 7 0 chr10 36851123 36851409 -103465356 - AluJo SINE Alu -24 288 1 237 303 327 0 chr10 36851433 36851598 -103465167 - L2 LINE L2 0 3272 3054 2347 107 0 7 chr10 36852690 36853000 -103463765 + AluSx SINE Alu 1 308 -4 265 171 289 0 chr10 36853560 36853636 -103463129 - MER5A DNA MER1_type -83 106 9 312 51 51 0 chr10 36853732 36853791 -103462974 + A-rich Low_complexity Low_complexity 6 67 0 24 32 0 0 chr10 36857247 36857278 -103459487 + AT_rich Low_complexity Low_complexity 1 31 0 336 154 29 0 chr10 36857966 36858070 -103458695 + (TG)n Simple_repeat Simple_repeat 2 108 0 31 0 0 0 chr10 36858203 36858234 -103458531 + AT_rich Low_complexity Low_complexity 1 31 0 186 261 75 90 chr10 36859823 36859957 -103456808 - MIR3 SINE MIR -13 195 64 195 42 0 0 chr10 36860181 36860205 -103456560 + (CA)n Simple_repeat Simple_repeat 1 24 0 1054 68 0 85 chr10 36860932 36861054 -103455711 - L1MA1 LINE L1 0 6302 6198 2282 78 3 0 chr10 36861054 36861347 -103455418 - AluSg SINE Alu -14 296 3 1054 68 0 85 chr10 36861347 36861401 -103455364 - L1MA1 LINE L1 -104 6198 6141 277 359 120 0 chr10 36861820 36861962 -103454803 - L2 LINE L2 -270 3043 2885 327 219 135 0 chr10 36862007 36862103 -103454662 + MIR SINE MIR 76 184 -78 180 0 0 0 chr10 36863746 36863766 -103452999 + (A)n Simple_repeat Simple_repeat 1 20 0 648 120 0 10 chr10 36864245 36864345 -103452420 - AluJ SINE Alu -25 287 189 1141 205 62 28 chr10 36864350 36864926 -103451839 + LTR9B LTR ERV1 7 644 0 1257 165 0 5 chr10 36864926 36865120 -103451645 - AluJ SINE Alu -119 193 1 459 0 0 0 chr10 36866816 36866867 -103449898 + (TTATA)n Simple_repeat Simple_repeat 4 54 0 318 335 66 30 chr10 36866919 36867116 -103449649 - MIR SINE MIR -50 212 9 978 148 19 6 chr10 36867223 36867385 -103449380 + FRAM SINE Alu 1 164 -2 210 259 24 59 chr10 36867844 36867929 -103448836 + L2 LINE L2 3142 3223 -49 3660 207 92 36 chr10 36869958 36870059 -103446706 + Charlie1 DNA MER1_type 5 99 -2662 1364 179 50 44 chr10 36870059 36870356 -103446409 + AluJo SINE Alu 1 299 -13 3660 207 92 36 chr10 36870356 36871603 -103445162 + Charlie1 DNA MER1_type 99 2761 0 260 309 131 82 chr10 36871636 36872209 -103444556 - L2 LINE L2 -88 3184 2566 198 103 0 0 chr10 36872649 36872678 -103444087 + (TGGGGG)n Simple_repeat Simple_repeat 1 29 0 1708 122 38 94 chr10 36873087 36873406 -103443359 - AluJb SINE Alu -11 301 1 21 36 0 0 chr10 36875621 36875649 -103441116 + AT_rich Low_complexity Low_complexity 1 28 0 466 272 30 69 chr10 36876832 36877034 -103439731 + MIR SINE MIR 68 261 -1 2280 65 0 0 chr10 36877570 36877846 -103438919 - AluY SINE Alu -2 309 34 2113 85 31 27 chr10 36878739 36879033 -103437732 - AluSc SINE Alu -14 295 1 423 38 0 0 chr10 36879460 36879513 -103437252 + (TG)n Simple_repeat Simple_repeat 1 53 0 2660 166 20 11 chr10 36879899 36880384 -103436381 + LTR45B LTR ERV1 3 525 0 330 313 41 6 chr10 36881139 36881312 -103435453 - MIR SINE MIR -49 213 34 291 279 192 34 chr10 36882086 36882294 -103434471 + MIR SINE MIR 20 260 -2 250 254 42 0 chr10 36882730 36882801 -103433964 - L1MD2 LINE L1 -237 6122 6049 186 346 99 0 chr10 36882830 36882911 -103433854 - L2 LINE L2 -14 3258 3170 621 111 11 11 chr10 36882991 36883081 -103433684 - HY4 scRNA scRNA -3 90 1 1865 163 3 0 chr10 36883083 36883371 -103433394 - AluJo SINE Alu -15 297 9 2250 150 9 17 chr10 36884422 36884769 -103431996 + MER2 DNA MER2_type 1 344 0 2144 136 14 163 chr10 36885202 36885704 -103431061 - LTR32 LTR ERVL -4 467 41 2375 179 30 5 chr10 36887455 36887896 -103428869 - MER66A LTR ERV1 0 478 27 438 307 92 26 chr10 36890593 36890821 -103425944 + MIR SINE MIR 20 262 0 2289 107 7 0 chr10 36892506 36892816 -103423949 + AluSx SINE Alu 1 312 0 1828 172 52 77 chr10 36894051 36894493 -103422272 - MSTB1 LTR MaLR 0 432 2 1816 156 6 35 chr10 36894890 36895204 -103421561 - AluJo SINE Alu -7 305 1 723 198 8 0 chr10 36895552 36895673 -103421092 + FLAM_C SINE Alu 12 133 -10 487 331 102 8 chr10 36898738 36899004 -103417761 - L2 LINE L2 -4 3309 3019 185 132 0 151 chr10 36899283 36899336 -103417429 + L2 LINE L2 3228 3272 0 210 277 36 24 chr10 36901640 36901723 -103415042 + MIR SINE MIR 103 186 -76 2584 199 128 43 chr10 36902072 36902400 -103414365 + MER45B DNA AcHobo 1 300 -740 1065 92 61 0 chr10 36902400 36902563 -103414202 - L1MA8 LINE L1 0 6291 6119 2584 199 128 43 chr10 36902563 36902962 -103413803 + MER45B DNA AcHobo 300 797 -243 450 100 0 0 chr10 36902965 36903025 -103413740 + L1MB2 LINE L1 6072 6131 -40 1333 163 16 12 chr10 36903025 36903282 -103413483 + MER45B DNA AcHobo 773 1030 -10 234 294 114 57 chr10 36904226 36904454 -103412311 + L1MC4 LINE L1 7526 7766 -276 536 300 70 16 chr10 36904718 36904961 -103411804 - MIR SINE MIR 0 262 7 192 213 0 85 chr10 36906135 36906182 -103410583 - L2 LINE L2 -109 3163 3121 2409 104 0 0 chr10 36906344 36906651 -103410114 - AluSq SINE Alu -6 307 1 2392 201 50 72 chr10 36906680 36907273 -103409492 + L1MB7 LINE L1 4930 5535 -649 2068 138 0 0 chr10 36907273 36907563 -103409202 + AluSx SINE Alu 1 290 -22 2392 201 50 72 chr10 36907563 36907957 -103408808 + L1MB7 LINE L1 5535 5936 -248 5474 109 35 71 chr10 36907957 36908359 -103408406 + L1PA15 LINE L1 5070 5485 -680 2252 98 0 7 chr10 36908359 36908656 -103408109 + AluSp SINE Alu 1 295 -18 5474 109 35 71 chr10 36908656 36908861 -103407904 + L1PA15 LINE L1 5485 5696 -469 551 62 0 12 chr10 36908861 36908942 -103407823 + (TA)n Simple_repeat Simple_repeat 1 80 0 5474 109 35 71 chr10 36908942 36909453 -103407312 + L1PA15 LINE L1 5696 6162 -3 2392 201 50 72 chr10 36909453 36909541 -103407224 + L1MB7 LINE L1 5936 5961 -223 697 193 14 0 chr10 36909568 36909708 -103407057 + L1MB7 LINE L1 6035 6176 -8 1485 158 0 97 chr10 36910262 36910572 -103406193 - AluJo SINE Alu -21 291 12 231 36 0 0 chr10 36910692 36910720 -103406045 + (TG)n Simple_repeat Simple_repeat 2 29 0 1681 166 10 14 chr10 36911783 36912072 -103404693 + AluJo SINE Alu 6 293 -19 222 37 0 0 chr10 36912300 36912327 -103404438 + (A)n Simple_repeat Simple_repeat 1 27 0 1821 179 0 3 chr10 36913736 36914037 -103402728 - AluJo SINE Alu -12 300 1 180 0 0 0 chr10 36914053 36914073 -103402692 + (T)n Simple_repeat Simple_repeat 1 20 0 1087 286 159 21 chr10 36914209 36914864 -103401901 + L2 LINE L2 1903 2647 -667 256 218 13 51 chr10 36914876 36914954 -103401811 + LTR50 LTR ERVL 1 75 -720 * 379 256 101 0 chr10 36914944 36915073 -103401692 + LTR33A LTR ERVL 354 495 -28 429 343 82 6 chr10 36915318 36915652 -103401113 + L2 LINE L2 2684 3042 -230 23 33 0 0 chr10 36915694 36915724 -103401041 + AT_rich Low_complexity Low_complexity 1 30 0 180 111 0 0 chr10 36915817 36915844 -103400921 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 21 0 0 0 chr10 36916120 36916141 -103400624 + AT_rich Low_complexity Low_complexity 1 21 0 214 217 0 43 chr10 36917079 36917125 -103399640 - MIR3 SINE MIR -21 187 144 2034 151 0 3 chr10 36920553 36920852 -103395913 + AluSx SINE Alu 1 298 -14 296 272 96 29 chr10 36921039 36921175 -103395590 - MIR SINE MIR -6 256 112 312 260 100 64 chr10 36921175 36921425 -103395340 + L1ME4a LINE L1 5765 6023 -98 560 303 65 47 chr10 36921963 36922471 -103394294 - L2 LINE L2 -3 3310 2800 184 246 154 0 chr10 36923522 36923587 -103393178 + MIR3 SINE MIR 134 208 0 1926 133 0 4 chr10 36923710 36923974 -103392791 + AluSx SINE Alu 26 288 -24 1807 105 101 0 chr10 36924589 36924846 -103391919 + AluSg SINE Alu 1 283 -27 243 255 32 43 chr10 36924917 36925011 -103391754 - MIR SINE MIR -37 225 133 414 0 0 0 chr10 36926612 36926658 -103390107 + (CAAAA)n Simple_repeat Simple_repeat 3 48 0 641 288 82 25 chr10 36927282 36927650 -103389115 + L1MEc LINE L1 31 419 -5977 845 189 77 0 chr10 36927964 36928133 -103388632 + AluJo SINE Alu 118 299 -13 624 228 31 81 chr10 36928142 36928265 -103388500 + L1MEc LINE L1 768 873 -5523 2126 117 20 0 chr10 36928265 36928564 -103388201 + AluSx SINE Alu 6 310 -2 624 228 31 81 chr10 36928564 36928699 -103388066 + L1MEc LINE L1 873 1013 -5383 404 189 72 1 chr10 36929575 36929671 -103387094 - MIR SINE MIR -70 138 37 295 159 0 72 chr10 36930211 36930280 -103386485 - AluJo SINE Alu -167 135 72 783 163 0 0 chr10 36930228 36930351 -103386414 - AluJo/FLAM SINE Alu -179 123 1 795 191 191 19 chr10 36932409 36932618 -103384147 - MIR SINE MIR 0 262 18 348 253 53 106 chr10 36932921 36933186 -103383579 - L2 LINE L2 -1 3312 3062 327 212 0 0 chr10 36933732 36933817 -103382948 + (TATATG)n Simple_repeat Simple_repeat 3 87 0 821 260 13 8 chr10 36934872 36935131 -103381634 + L1PB4 LINE L1 5896 6156 0 2252 103 3 0 chr10 36935138 36935440 -103381325 + AluSg SINE Alu 1 303 -7 324 0 0 0 chr10 36935558 36935594 -103381171 + (TG)n Simple_repeat Simple_repeat 2 37 0 363 315 68 12 chr10 36936174 36936336 -103380429 - MER91B DNA MER1_type -4 186 16 203 358 152 32 chr10 36939119 36939793 -103376972 - L2 LINE L2 -493 2821 2046 1656 161 17 53 chr10 36939793 36940092 -103376673 + AluJo SINE Alu 5 292 -20 203 358 152 32 chr10 36940092 36940169 -103376596 - L2 LINE L2 -1268 2046 1980 1841 182 123 18 chr10 36940241 36940681 -103376084 - MLT1D LTR MaLR -19 486 1 251 161 18 36 chr10 36940820 36940876 -103375889 - Alu SINE Alu -1 301 247 1613 178 14 11 chr10 36940876 36941151 -103375614 - AluJo SINE Alu -34 278 3 893 169 0 0 chr10 36941152 36941288 -103375477 - AluJo SINE Alu -176 136 1 225 281 112 31 chr10 36941288 36941548 -103375217 - L2 LINE L2 -1603 1711 1431 2164 113 0 0 chr10 36942420 36942850 -103373915 + AluSx SINE Alu 1 430 0 319 256 175 22 chr10 36943080 36943217 -103373548 + MER5A DNA MER1_type 32 189 0 1754 184 7 13 chr10 36943240 36943550 -103373215 - AluJo SINE Alu -4 308 1 709 262 56 26 chr10 36944197 36944363 -103372402 - MIR SINE MIR -21 241 65 1788 157 28 7 chr10 36944363 36944650 -103372115 + AluJb SINE Alu 5 297 -15 709 262 56 26 chr10 36944650 36944716 -103372049 - MIR SINE MIR -197 65 2 2081 153 14 14 chr10 36945018 36945384 -103371381 + MER47A DNA MER2_type 1 366 0 258 180 0 0 chr10 36945642 36945692 -103371073 - MLT1J2 LTR MaLR -329 121 72 2025 129 7 17 chr10 36945732 36946034 -103370731 - AluJo SINE Alu -13 299 1 195 309 18 0 chr10 36947502 36947557 -103369208 - L3 LINE CR1 -20 1557 1502 843 200 22 22 chr10 36948737 36948922 -103367843 + MER5A DNA MER1_type 5 189 0 6334 29 0 0 chr10 36949185 36949921 -103366844 + L1PA5 LINE L1 5416 6151 -3 634 123 17 13 chr10 36949938 36950078 -103366687 + L1MA4A LINE L1 6160 6299 -4 200 158 0 123 chr10 36950225 36950282 -103366483 + L2 LINE L2 2688 2737 -577 2145 124 0 0 chr10 36951124 36951422 -103365343 - AluSq SINE Alu -15 298 1 2478 228 23 27 chr10 36952182 36952920 -103363845 + L1MD1 LINE L1 3657 4391 -1755 2886 243 37 48 chr10 36953020 36953438 -103363327 + L1MD1 LINE L1 4870 5291 -951 1569 188 15 0 chr10 36953438 36953699 -103363066 + AluJb SINE Alu 14 278 -34 303 49 0 0 chr10 36953702 36953743 -103363022 + (CAAA)n Simple_repeat Simple_repeat 1 41 0 2886 243 37 48 chr10 36953743 36954717 -103362048 + L1MD1 LINE L1 5293 6240 -2 1401 152 25 33 chr10 36959040 36959283 -103357482 - AluJo SINE Alu -30 282 42 2478 96 19 16 chr10 36959408 36959782 -103356983 + THE1C LTR MaLR 1 375 0 828 198 0 50 chr10 36960111 36960293 -103356472 - FRAM SINE Alu 0 176 4 230 329 29 7 chr10 36961786 36961926 -103354839 - MER103 DNA DNA -12 154 12 21 36 0 0 chr10 36964740 36964768 -103351997 + AT_rich Low_complexity Low_complexity 1 28 0 1827 140 9 59 chr10 36966254 36966576 -103350189 + AluJo SINE Alu 1 306 -6 1181 268 137 36 chr10 36967196 36968029 -103348736 - L2 LINE L2 0 3313 2371 1930 168 0 0 chr10 36968905 36969197 -103347568 + AluJb SINE Alu 1 292 -20 1057 148 32 56 chr10 36969946 36970162 -103346603 - AluJb SINE Alu -20 292 82 1987 131 0 0 chr10 36970184 36970466 -103346299 - AluSx SINE Alu -30 282 1 216 0 0 0 chr10 36970472 36970496 -103346269 + (TAA)n Simple_repeat Simple_repeat 1 24 0 365 280 84 35 chr10 36972483 36972626 -103344139 - MIR SINE MIR -66 196 47 684 165 0 9 chr10 36972743 36972858 -103343907 + FLAM_C SINE Alu 3 116 -17 27 0 0 0 chr10 36973686 36973713 -103343052 + AT_rich Low_complexity Low_complexity 1 27 0 726 172 15 0 chr10 36975897 36976031 -103340734 + AluJo SINE Alu 1 136 -176 1931 128 11 0 chr10 36977226 36977491 -103339274 - AluJo SINE Alu -30 282 15 24 32 0 0 chr10 36977508 36977539 -103339226 + AT_rich Low_complexity Low_complexity 1 31 0 332 222 192 0 chr10 36977816 36977915 -103338850 + FLAM_A SINE Alu 5 122 -11 1625 171 67 0 chr10 36978017 36978286 -103338479 + AluJo SINE Alu 3 289 -23 322 260 24 55 chr10 36978761 36978888 -103337877 + MLT1J LTR MaLR 4 126 -385 763 200 119 60 chr10 36978911 36979146 -103337619 + MIR SINE MIR 11 259 -3 1924 197 78 6 chr10 36979274 36979746 -103337019 + L1MB3 LINE L1 5676 6181 -2 313 304 80 0 chr10 36979764 36979902 -103336863 + MLT1J LTR MaLR 318 466 -45 1181 172 216 36 chr10 36981348 36981468 -103335297 + AluJb SINE Alu 1 98 -204 195 42 0 0 chr10 36981468 36981492 -103335273 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 1181 172 216 36 chr10 36981492 36981621 -103335144 + AluJb SINE Alu 98 295 -7 403 302 128 76 chr10 36982284 36982996 -103333769 + L2 LINE L2 1952 2700 -614 927 289 8 4 chr10 36983295 36983534 -103333231 - MIR SINE MIR -21 241 2 378 299 19 38 chr10 36983540 36983697 -103333068 - MER112 DNA MER1_type -106 154 1 392 243 0 39 chr10 36983883 36983986 -103332779 + L2 LINE L2 3173 3271 -1 818 164 0 15 chr10 36985186 36985320 -103331445 + FLAM_C SINE Alu 2 133 0 561 294 71 34 chr10 36985561 36985799 -103330966 + MIR SINE MIR 4 250 -12 1483 163 52 45 chr10 36986668 36986956 -103329809 + AluJo SINE Alu 1 290 -22 1733 140 54 0 chr10 36986983 36987262 -103329503 + AluSx SINE Alu 1 294 -18 409 135 0 27 chr10 36988932 36989006 -103327759 - FLAM_C SINE Alu -3 140 69 1683 150 78 14 chr10 37040995 37041288 -103275477 + AluJb SINE Alu 1 312 0 23 33 0 0 chr10 37041290 37041320 -103275445 + AT_rich Low_complexity Low_complexity 1 30 0 510 257 280 0 chr10 37042046 37042221 -103274544 + MER58A DNA MER1_type 1 224 0 1588 179 38 3 chr10 37042419 37042709 -103274056 + AluJb SINE Alu 1 300 -12 691 186 0 0 chr10 37042730 37042848 -103273917 + FLAM_C SINE Alu 1 118 -15 2346 87 3 3 chr10 37042958 37043256 -103273509 - AluSc SINE Alu -11 298 1 1329 127 0 0 chr10 37043258 37043447 -103273318 - AluSq SINE Alu -124 189 1 1717 202 0 3 chr10 37043450 37043747 -103273018 - AluJb SINE Alu -16 296 1 2056 138 0 0 chr10 37044165 37044456 -103272309 - AluSx SINE Alu -21 291 1 2822 22 0 0 chr10 37044838 37045152 -103271613 + AluYb8 SINE Alu 4 317 -1 1909 147 40 0 chr10 37045346 37045646 -103271119 + AluSx SINE Alu 1 312 0 287 319 92 14 chr10 37046278 37046419 -103270346 + L2 LINE L2 3116 3267 -5 224 29 0 29 chr10 37048734 37048768 -103267997 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 627 191 0 0 chr10 37049428 37049533 -103267232 - FLAM_A SINE Alu -16 126 22 189 250 0 0 chr10 37052333 37052373 -103264392 + L2 LINE L2 3218 3257 -15 803 144 0 0 chr10 37053663 37053781 -103262984 + AluJb SINE Alu 1 118 -194 469 339 14 79 chr10 37053916 37054081 -103262684 + MIR SINE MIR 1 175 -87 1518 148 65 15 chr10 37054081 37054344 -103262421 + AluJo SINE Alu 1 276 -36 375 41 0 0 chr10 37054347 37054396 -103262369 + (CA)n Simple_repeat Simple_repeat 1 49 0 469 339 14 79 chr10 37054396 37054503 -103262262 + MIR SINE MIR 177 259 -3 21 36 0 0 chr10 37054683 37054711 -103262054 + AT_rich Low_complexity Low_complexity 1 28 0 826 244 159 26 chr10 37054904 37055244 -103261521 - LTR40b LTR ERVL -4 458 74 253 272 243 40 chr10 37055533 37055809 -103260956 + HAL1 LINE L1 1610 1941 -566 571 237 0 8 chr10 37055839 37055970 -103260795 - FLAM_A SINE Alu -3 130 1 600 278 101 6 chr10 37056037 37056382 -103260383 + HAL1 LINE L1 1987 2364 -143 1138 147 0 6 chr10 37056964 37057134 -103259631 + FRAM SINE Alu 1 168 -8 26 30 0 0 chr10 37057394 37057427 -103259338 + AT_rich Low_complexity Low_complexity 1 33 0 23 68 0 0 chr10 37057548 37057592 -103259173 + AT_rich Low_complexity Low_complexity 1 44 0 35 54 0 0 chr10 37058154 37058210 -103258555 + AT_rich Low_complexity Low_complexity 1 56 0 620 264 45 0 chr10 37059261 37059416 -103257349 + MIR SINE MIR 91 252 -10 25 0 0 0 chr10 37059657 37059682 -103257083 + AT_rich Low_complexity Low_complexity 1 25 0 2030 204 24 20 chr10 37059989 37060449 -103256316 + LTR40b LTR ERVL 1 462 0 1536 223 99 47 chr10 37060601 37061049 -103255716 + MLT2B1 LTR ERVL 2 480 -40 447 19 0 0 chr10 37061049 37061101 -103255664 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 1536 223 99 47 chr10 37061101 37061145 -103255620 + MLT2B1 LTR ERVL 480 520 0 291 71 0 0 chr10 37061236 37061278 -103255487 + (TG)n Simple_repeat Simple_repeat 2 43 0 1669 189 4 0 chr10 37061295 37061576 -103255189 - AluJo SINE Alu -30 282 1 333 0 0 0 chr10 37062459 37062496 -103254269 + (CA)n Simple_repeat Simple_repeat 2 38 0 1014 188 0 51 chr10 37063303 37063500 -103253265 + AluJo SINE Alu 85 271 -41 299 64 0 43 chr10 37063500 37063547 -103253218 + AluJo SINE Alu 249 293 -9 869 117 16 0 chr10 37063849 37063977 -103252788 + FLAM_C SINE Alu 1 130 -3 480 180 238 0 chr10 37063993 37064115 -103252650 + L1MA4A LINE L1 6109 6259 -44 24 53 0 0 chr10 37064119 37064157 -103252608 + AT_rich Low_complexity Low_complexity 1 38 0 435 246 109 0 chr10 37064515 37064625 -103252140 + MER63A DNA MER1_type 52 173 -37 750 183 63 34 chr10 37066148 37066323 -103250442 + LTR8 LTR ERV1 1 180 -511 1052 196 112 52 chr10 37066328 37066614 -103250151 + LTR8A LTR ERV1 425 727 0 21 36 0 0 chr10 37067225 37067253 -103249512 + AT_rich Low_complexity Low_complexity 1 28 0 27 29 0 0 chr10 37067467 37067501 -103249264 + AT_rich Low_complexity Low_complexity 1 34 0 1697 177 7 0 chr10 37067504 37067786 -103248979 - AluJo SINE Alu -27 285 2 1784 170 0 17 chr10 37068095 37068389 -103248376 - AluJo SINE Alu -23 289 1 2241 116 3 0 chr10 37068549 37068852 -103247913 + AluSx SINE Alu 1 304 -8 183 80 0 0 chr10 37069255 37069280 -103247485 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 950 214 0 35 chr10 37069280 37069481 -103247284 - AluJo SINE Alu -32 280 87 256 336 45 15 chr10 37069489 37069623 -103247142 - L1MC/D LINE L1 -1991 5817 5680 1557 194 20 7 chr10 37070207 37070500 -103246265 + AluJo SINE Alu 1 297 -15 65 66 0 0 chr10 37070602 37070723 -103246042 + AT_rich Low_complexity Low_complexity 1 121 0 764 310 45 50 chr10 37070972 37071369 -103245396 - L2 LINE L2 0 3313 2919 355 312 101 30 chr10 37071458 37071657 -103245108 + MIR SINE MIR 2 214 -48 5262 143 23 48 chr10 37071682 37072907 -103243858 + L1MA8 LINE L1 5089 6285 -6 2003 113 7 11 chr10 37073821 37074128 -103242637 - AluSx SINE Alu 0 306 1 1604 142 77 4 chr10 37074730 37074991 -103241774 - AluJo SINE Alu -13 299 20 5323 133 53 46 chr10 37076106 37077170 -103239595 + MER11C LTR ERVK 1 1071 0 716 221 0 0 chr10 37077683 37077810 -103238955 + FLAM_A SINE Alu 1 127 -6 1618 199 0 22 chr10 37078703 37078867 -103237898 - AluJo SINE Alu -7 305 139 384 40 0 0 chr10 37078867 37078917 -103237848 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 2031 125 0 4 chr10 37078918 37079198 -103237567 - AluSg SINE Alu -31 279 1 1618 199 0 22 chr10 37079198 37079343 -103237422 - AluJo SINE Alu -172 140 1 248 312 72 8 chr10 37079869 37079994 -103236771 - MIR SINE MIR -64 198 66 2270 107 7 3 chr10 37080772 37081081 -103235684 + AluSq SINE Alu 1 310 -3 2481 66 23 0 chr10 37081082 37081385 -103235380 + AluY SINE Alu 2 311 0 375 23 0 0 chr10 37081646 37081690 -103235075 + (CA)n Simple_repeat Simple_repeat 1 44 0 231 310 58 0 chr10 37083630 37083717 -103233048 - MIR SINE MIR -11 251 160 203 327 20 52 chr10 37083920 37084073 -103232692 - L2 LINE L2 -656 2658 2511 22 0 0 0 chr10 37084274 37084296 -103232469 + AT_rich Low_complexity Low_complexity 1 22 0 492 285 141 47 chr10 37085765 37086382 -103230383 + L1MC4a LINE L1 5499 6173 -1635 196 222 0 0 chr10 37088526 37088562 -103228203 - L2 LINE L2 -1897 1417 1382 1936 129 11 7 chr10 37088766 37089046 -103227719 - AluSx SINE Alu -7 305 25 22 0 0 0 chr10 37091098 37091120 -103225645 + AT_rich Low_complexity Low_complexity 1 22 0 1569 185 16 38 chr10 37091903 37092217 -103224548 + AluJo SINE Alu 4 310 -2 2193 113 16 38 chr10 37092695 37093067 -103223698 - THE1B LTR MaLR 0 364 1 518 302 94 5 chr10 37095671 37095873 -103220892 - MIR SINE MIR -18 244 25 21 0 0 0 chr10 37095996 37096017 -103220748 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr10 37096277 37096302 -103220463 + AT_rich Low_complexity Low_complexity 1 25 0 3794 168 15 72 chr10 37096408 37096513 -103220252 + L1MA9 LINE L1 5384 5493 -819 2089 145 6 3 chr10 37096513 37096824 -103219941 + AluSx SINE Alu 1 312 0 2117 125 0 16 chr10 37096834 37097139 -103219626 + AluSc SINE Alu 1 300 -9 3794 168 15 72 chr10 37097139 37097445 -103219320 + L1MA9 LINE L1 5502 5824 -488 276 30 0 0 chr10 37097445 37097478 -103219287 + (TG)n Simple_repeat Simple_repeat 2 34 0 3794 168 15 72 chr10 37097478 37097831 -103218934 + L1MA9 LINE L1 5824 6196 -116 1576 180 10 37 chr10 37097831 37098122 -103218643 + AluJo SINE Alu 1 285 -27 180 0 0 0 chr10 37098122 37098142 -103218623 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 3794 168 15 72 chr10 37098150 37098232 -103218533 + L1MA9 LINE L1 6196 6184 -128 2463 61 3 0 chr10 37098232 37098529 -103218236 - AluY SINE Alu -12 299 2 3794 168 15 72 chr10 37098529 37098653 -103218112 + L1MA9 LINE L1 6183 6312 0 1228 48 0 24 chr10 37098765 37098932 -103217833 + L1PA4 LINE L1 5993 6155 0 456 249 40 49 chr10 37101491 37101800 -103214965 + L1MC4 LINE L1 6977 7217 -744 225 337 30 30 chr10 37102247 37102413 -103214352 + L2 LINE L2 2565 2730 -584 219 286 54 0 chr10 37102548 37102604 -103214161 + L2 LINE L2 3002 3060 -212 259 50 50 0 chr10 37104816 37104856 -103211909 - Alu SINE Alu -12 289 248 2318 94 0 3 chr10 37105612 37105911 -103210854 - AluSq SINE Alu -15 298 1 1705 201 7 0 chr10 37106914 37107212 -103209553 - AluJb SINE Alu -12 300 1 1966 160 0 16 chr10 37107503 37107816 -103208949 - AluJo SINE Alu -4 308 1 449 245 0 9 chr10 37107836 37107942 -103208823 + FRAM SINE Alu 56 160 -16 2358 66 0 16 chr10 37108479 37108784 -103207981 - AluY SINE Alu -11 300 1 24 32 0 0 chr10 37108994 37109025 -103207740 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr10 37109047 37109076 -103207689 + AT_rich Low_complexity Low_complexity 1 29 0 341 275 24 97 chr10 37109784 37109865 -103206900 + MIR SINE MIR 71 156 -106 2477 68 3 0 chr10 37109865 37110175 -103206590 + AluY SINE Alu 1 311 0 341 275 24 97 chr10 37110175 37110300 -103206465 + MIR SINE MIR 156 262 0 21 0 0 0 chr10 37110594 37110615 -103206150 + AT_rich Low_complexity Low_complexity 1 21 0 2294 100 0 3 chr10 37110636 37110945 -103205820 + AluSx SINE Alu 1 308 -4 1427 183 52 17 chr10 37111879 37112169 -103204596 + AluJb SINE Alu 4 303 -9 210 222 44 0 chr10 37112171 37112216 -103204549 + polypurine Low_complexity Low_complexity 4 50 0 544 197 14 50 chr10 37112217 37112536 -103204229 + GA-rich Low_complexity Low_complexity 1 307 0 356 187 8 66 chr10 37112636 37112896 -103203869 + GA-rich Low_complexity Low_complexity 1 244 0 1823 156 47 26 chr10 37113198 37113538 -103203227 + MER7A DNA MER2_type 1 345 -1 211 171 110 98 chr10 37113683 37113765 -103203000 + MER5A DNA MER1_type 103 185 -4 369 225 17 81 chr10 37113941 37114114 -103202651 + L1ME LINE L1 5588 5749 -372 1710 184 9 26 chr10 37114387 37114734 -103202031 + MER2 DNA MER2_type 1 341 -3 341 302 102 36 chr10 37116592 37116817 -103199948 + L1ME4a LINE L1 5683 5922 -199 351 0 0 0 chr10 37116817 37116856 -103199909 + (TG)n Simple_repeat Simple_repeat 2 40 0 1575 197 11 0 chr10 37116960 37117265 -103199500 + AluJb SINE Alu 1 308 0 180 194 0 0 chr10 37118468 37118504 -103198261 - L2 LINE L2 0 3313 3278 1915 153 7 0 chr10 37118608 37118902 -103197863 - AluSx SINE Alu -16 296 1 575 321 72 9 chr10 37119944 37120165 -103196600 + MIR SINE MIR 14 248 -14 996 132 26 5 chr10 37120314 37120504 -103196261 + L1MA4 LINE L1 6096 6289 -11 2023 118 0 14 chr10 37121064 37121352 -103195413 - AluSx SINE Alu -28 284 1 29 0 0 0 chr10 37122708 37122737 -103194028 + AT_rich Low_complexity Low_complexity 1 29 0 863 173 0 0 chr10 37122898 37123031 -103193734 + AluJ SINE Alu 1 133 -169 853 180 0 56 chr10 37123031 37123073 -103193692 + AluJ SINE Alu 129 172 -140 2314 188 41 2 chr10 37123073 37123537 -103193228 + MER66B LTR ERV1 5 486 0 853 180 0 56 chr10 37123537 37123655 -103193110 + AluJ SINE Alu 172 280 -32 222 222 0 0 chr10 37124116 37124161 -103192604 - MIR SINE MIR -63 145 101 4189 209 102 30 chr10 37124538 37125499 -103191266 - Charlie1a DNA MER1_type -1306 1455 365 637 224 0 8 chr10 37125499 37125633 -103191132 + FLAM_A SINE Alu 1 133 0 4189 209 102 30 chr10 37125633 37126027 -103190738 - Charlie1a DNA MER1_type -2396 365 1 202 303 45 0 chr10 37126036 37126125 -103190640 + MIR3 SINE MIR 85 177 -31 2193 87 4 0 chr10 37128044 37128319 -103188446 - AluSp SINE Alu -21 292 17 273 224 172 30 chr10 37128514 37128648 -103188117 + L1MD1 LINE L1 6069 6221 -21 2411 65 0 20 chr10 37128653 37128959 -103187806 - AluY SINE Alu -11 300 1 1549 194 7 13 chr10 37129732 37130031 -103186734 - AluJb SINE Alu -15 297 1 759 121 28 130 chr10 37130231 37130284 -103186481 - L1PA15 LINE L1 -2 6163 6106 2360 100 3 0 chr10 37130284 37130595 -103186170 - AluSx SINE Alu 0 312 1 759 121 28 130 chr10 37130595 37130690 -103186075 - L1PA15 LINE L1 -59 6106 6041 207 0 0 0 chr10 37130690 37130713 -103186052 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 759 121 28 130 chr10 37130713 37130778 -103185987 - L1PA15 LINE L1 -124 6041 5971 1416 159 6 106 chr10 37131333 37131514 -103185251 - AluJo SINE Alu -23 289 152 1784 178 10 0 chr10 37131514 37131823 -103184942 - AluJo SINE Alu 0 312 1 1416 159 6 106 chr10 37131823 37131962 -103184803 - AluJo SINE Alu -160 152 1 21 0 0 0 chr10 37132338 37132359 -103184406 + AT_rich Low_complexity Low_complexity 1 21 0 2252 95 0 23 chr10 37132363 37132668 -103184097 + AluSp SINE Alu 6 303 -10 1781 158 0 4 chr10 37132725 37133004 -103183761 + AluJb SINE Alu 35 312 0 290 325 0 0 chr10 37133123 37133203 -103183562 + L2 LINE L2 3192 3271 -42 2483 246 45 2 chr10 37133214 37133835 -103182930 + MER82 DNA MER2_type 1 648 -5 224 29 0 29 chr10 37134006 37134040 -103182725 + (TTG)n Simple_repeat Simple_repeat 2 34 0 248 373 0 0 chr10 37134104 37134179 -103182586 - L2 LINE L2 -65 3207 3133 3436 148 120 39 chr10 37134508 37134548 -103182217 - MER4D LTR ERV1 -9 863 828 2143 119 0 0 chr10 37134548 37134843 -103181922 + AluSx SINE Alu 1 295 -17 3436 148 120 39 chr10 37134843 37135410 -103181355 - MER4D LTR ERV1 -44 828 173 1821 154 21 0 chr10 37135410 37135696 -103181069 - AluJo SINE Alu -8 304 13 3436 148 120 39 chr10 37135696 37135885 -103180880 - MER4D LTR ERV1 -699 173 1 248 316 40 42 chr10 37135925 37136132 -103180633 - L2 LINE L2 -280 2992 2791 305 217 60 60 chr10 37136187 37136270 -103180495 - MER5A DNA MER1_type -89 100 18 219 158 35 18 chr10 37136310 37136367 -103180398 + (TA)n Simple_repeat Simple_repeat 1 58 0 22 0 0 0 chr10 37137310 37137332 -103179433 + AT_rich Low_complexity Low_complexity 1 22 0 962 159 0 0 chr10 37137800 37137957 -103178808 - AluJb SINE Alu -2 310 154 1411 132 5 32 chr10 37138546 37138766 -103177999 + AluSx SINE Alu 1 214 -98 560 295 19 78 chr10 37139245 37139513 -103177252 - MIR SINE MIR -2 260 9 216 67 0 0 chr10 37139881 37139911 -103176854 + (GA)n Simple_repeat Simple_repeat 2 31 0 330 127 0 18 chr10 37140028 37140083 -103176682 - Alu SINE Alu -245 54 1 475 268 57 25 chr10 37140299 37140456 -103176309 - MER5B DNA MER1_type -2 176 15 360 162 44 0 chr10 37140531 37140599 -103176166 - MER5A DNA MER1_type -77 112 42 252 258 0 0 chr10 37140626 37140692 -103176073 - Charlie5 DNA MER1_type -2529 83 18 1229 223 61 41 chr10 37142847 37142940 -103173825 - MER63B DNA MER1_type -642 420 330 2337 125 0 0 chr10 37142940 37143252 -103173513 + AluSq SINE Alu 1 312 -1 1229 223 61 41 chr10 37143252 37143570 -103173195 - MER63B DNA MER1_type -732 330 1 317 224 87 22 chr10 37144053 37144236 -103172529 - Charlie7 DNA MER1_type 0 2612 2418 635 215 79 51 chr10 37145042 37145256 -103171509 + L1MC5 LINE L1 6694 6913 -1048 1840 164 16 19 chr10 37145410 37145721 -103171044 + AluJb SINE Alu 1 310 -2 785 259 74 56 chr10 37145732 37146288 -103170477 + L1MC5 LINE L1 7017 7582 -379 430 275 7 0 chr10 37146380 37146522 -103170243 + L1MC5 LINE L1 7708 7850 -111 1173 164 5 5 chr10 37146765 37146973 -103169792 - MER2 DNA MER2_type -135 210 3 1979 162 0 7 chr10 37147973 37148281 -103168484 + AluSx SINE Alu 3 308 -4 1627 171 89 0 chr10 37149265 37149580 -103167185 + MER2 DNA MER2_type 1 343 -1 1860 124 4 4 chr10 37149938 37150196 -103166569 + AluSx SINE Alu 1 258 -54 208 180 20 0 chr10 37150205 37150255 -103166510 + A-rich Low_complexity Low_complexity 4 54 0 1871 165 104 15 chr10 37150612 37151005 -103165760 + MSTA LTR MaLR 1 428 0 1197 200 79 110 chr10 37151175 37151320 -103165445 + MLT1D LTR MaLR 1 149 -356 1324 205 76 6 chr10 37151320 37151661 -103165104 + MLT1A1 LTR MaLR 1 365 0 1197 200 79 110 chr10 37151661 37152035 -103164730 + MLT1D LTR MaLR 149 504 -1 446 221 177 0 chr10 37152138 37152251 -103164514 + FLAM_A SINE Alu 1 133 0 1391 167 59 38 chr10 37153614 37153901 -103162864 - AluJo SINE Alu -19 293 1 1900 152 30 0 chr10 37155331 37155633 -103161132 + AluSx SINE Alu 1 311 -1 261 75 0 0 chr10 37157021 37157061 -103159704 + (A)n Simple_repeat Simple_repeat 1 40 0 464 165 10 19 chr10 37158920 37159023 -103157742 - ORSL DNA AcHobo -33 242 141 314 213 21 53 chr10 37159129 37159223 -103157542 - ORSL DNA AcHobo -184 91 1 715 245 0 19 chr10 37159409 37159617 -103157148 + Charlie2 DNA MER1_type 1881 2084 -778 * 1378 186 10 10 chr10 37159613 37159919 -103156846 + MER89 LTR ERV1 254 559 0 225 170 151 28 chr10 37160019 37160125 -103156640 + Charlie2 DNA MER1_type 2443 2561 -301 1234 251 52 26 chr10 37160271 37160808 -103155957 - L1MC5 LINE L1 -173 7788 7238 915 189 11 0 chr10 37160841 37161021 -103155744 - MSTD LTR MaLR 0 396 215 939 205 11 5 chr10 37161218 37161408 -103155357 - AluJb SINE Alu -15 297 107 557 198 0 0 chr10 37161477 37161583 -103155182 - MSTD LTR MaLR -290 106 1 1293 250 73 39 chr10 37161583 37162144 -103154621 - L1MC5 LINE L1 -746 7215 6636 21 0 0 0 chr10 37162574 37162595 -103154170 + AT_rich Low_complexity Low_complexity 1 21 0 2126 103 0 10 chr10 37162778 37163069 -103153696 - AluSg SINE Alu -22 288 1 707 224 99 10 chr10 37163248 37163449 -103153316 - MER20 DNA MER1_type 0 219 1 24 0 0 0 chr10 37165303 37165327 -103151438 + AT_rich Low_complexity Low_complexity 1 24 0 2086 99 31 27 chr10 37165461 37165755 -103151010 - AluSx SINE Alu -17 295 1 218 289 0 0 chr10 37166981 37167033 -103149732 + (TATATG)n Simple_repeat Simple_repeat 1 52 0 4044 207 71 63 chr10 37167109 37167191 -103149574 + L1MC4a LINE L1 6335 6415 -1393 192 40 0 0 chr10 37167191 37167216 -103149549 + (CA)n Simple_repeat Simple_repeat 1 25 0 4044 207 71 63 chr10 37167216 37167357 -103149408 + L1MC4a LINE L1 6415 6553 -1255 2160 138 0 0 chr10 37167357 37167669 -103149096 - AluSx SINE Alu 0 312 1 4044 207 71 63 chr10 37167669 37168906 -103147859 + L1MC4a LINE L1 6553 7808 0 23 68 0 0 chr10 37168906 37168950 -103147815 + AT_rich Low_complexity Low_complexity 1 44 0 2183 109 3 3 chr10 37169022 37169311 -103147454 + AluSx SINE Alu 1 292 -20 576 0 0 0 chr10 37169311 37169375 -103147390 + (CATAA)n Simple_repeat Simple_repeat 2 65 0 2183 109 3 3 chr10 37169375 37169389 -103147376 + AluSx SINE Alu 291 304 -8 806 240 23 27 chr10 37170048 37170269 -103146496 - MER58A DNA MER1_type -1 223 4 180 0 0 0 chr10 37170854 37170874 -103145891 + (A)n Simple_repeat Simple_repeat 1 20 0 227 308 55 75 chr10 37171332 37171478 -103145287 + MIR SINE MIR 5 147 -115 1275 257 57 14 chr10 37171488 37171927 -103144838 + MLT1D LTR MaLR 4 461 -44 2250 113 0 3 chr10 37175293 37175595 -103141170 + AluSc SINE Alu 3 303 -6 197 235 39 0 chr10 37177958 37178009 -103138756 + MIR SINE MIR 73 125 -83 270 0 0 0 chr10 37178017 37178047 -103138718 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 14376 142 59 13 chr10 37178978 37179218 -103137547 - Tigger2 DNA MER2_type 0 2718 2491 2224 121 0 3 chr10 37179218 37179523 -103137242 - AluSx SINE Alu -7 305 2 14376 142 59 13 chr10 37179523 37181878 -103134887 - Tigger2 DNA MER2_type -227 2491 2 1760 168 45 6 chr10 37182337 37182670 -103134095 - MER7A DNA MER2_type 0 346 3 1422 142 0 0 chr10 37182712 37182930 -103133835 + L1PA16 LINE L1 5941 6158 -8 2125 120 7 3 chr10 37183014 37183314 -103133451 + AluSx SINE Alu 1 301 -11 1439 54 0 0 chr10 37183600 37183768 -103132997 + AluY SINE Alu 127 294 -17 370 322 15 16 chr10 37183899 37184057 -103132708 + MIR SINE MIR 18 149 -59 2074 142 0 3 chr10 37184218 37184507 -103132258 + AluSx SINE Alu 1 288 -24 2044 105 49 3 chr10 37184980 37185265 -103131500 - AluSx SINE Alu -14 298 1 21 0 0 0 chr10 37185694 37185715 -103131050 + AT_rich Low_complexity Low_complexity 1 21 0 1505 196 34 14 chr10 37186494 37186785 -103129980 - AluJo SINE Alu -15 297 1 500 65 13 13 chr10 37187581 37187658 -103129107 + Alu SINE Alu 225 301 -8 972 267 57 0 chr10 37188401 37188716 -103128049 + MER46C DNA MER2_type 1 333 -5 1263 233 48 22 chr10 37188726 37188877 -103127888 - MER63B DNA MER1_type -634 428 283 2082 104 31 3 chr10 37188877 37189166 -103127599 + AluSx SINE Alu 1 297 -15 1263 233 48 22 chr10 37189166 37189426 -103127339 - MER63B DNA MER1_type -779 283 6 405 213 0 0 chr10 37189704 37189779 -103126986 + L2 LINE L2 3238 3312 -1 21 0 0 0 chr10 37189815 37189836 -103126929 + AT_rich Low_complexity Low_complexity 1 21 0 1273 194 0 87 chr10 37189963 37190272 -103126493 + AluJo SINE Alu 1 282 -30 24 0 0 0 chr10 37190539 37190563 -103126202 + AT_rich Low_complexity Low_complexity 1 24 0 916 137 7 0 chr10 37191384 37191530 -103125235 - FRAM SINE Alu -19 147 1 252 0 0 0 chr10 37191693 37191721 -103125044 + (TG)n Simple_repeat Simple_repeat 2 29 0 1038 183 39 0 chr10 37191883 37192091 -103124674 + MER20 DNA MER1_type 2 217 -2 830 166 0 14 chr10 37192729 37192874 -103123891 + AluJb SINE Alu 163 305 -7 770 139 39 0 chr10 37194115 37194244 -103122521 + MER5A DNA MER1_type 1 134 -55 307 320 51 26 chr10 37194147 37194303 -103122462 - MER5A DNA MER1_type -23 166 7 * 215 274 80 44 chr10 37194348 37194461 -103122304 - MIR SINE MIR -43 219 103 2188 106 0 10 chr10 37195144 37195436 -103121329 - AluSx SINE Alu -23 289 1 21 71 0 0 chr10 37195635 37195677 -103121088 + AT_rich Low_complexity Low_complexity 1 42 0 2109 120 0 3 chr10 37195814 37196106 -103120659 + AluSg SINE Alu 1 291 -19 1751 169 0 33 chr10 37197784 37198086 -103118679 + AluSx SINE Alu 4 295 -17 207 0 0 0 chr10 37199059 37199082 -103117683 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1686 152 39 7 chr10 37199803 37200086 -103116679 - AluJo SINE Alu -20 292 1 1372 174 52 7 chr10 37201703 37201973 -103114792 - AluJo SINE Alu -30 282 1 2125 125 0 20 chr10 37201999 37202302 -103114463 + AluSq SINE Alu 1 297 -16 346 81 210 0 chr10 37202433 37202495 -103114270 + MADE1 DNA Mariner 6 80 0 1844 158 33 6 chr10 37204529 37204865 -103111900 + L1MC1 LINE L1 5979 6323 -10 2471 84 0 0 chr10 37205946 37206254 -103110511 - AluY SINE Alu -3 308 1 239 385 37 9 chr10 37206813 37206922 -103109843 + L2 LINE L2 3200 3311 -2 606 128 0 11 chr10 37206953 37207047 -103109718 + FLAM_C SINE Alu 27 119 -24 617 137 11 0 chr10 37207054 37207149 -103109616 - AluSp/q SINE Alu -15 298 203 1476 51 0 0 chr10 37207261 37207438 -103109327 - AluY SINE Alu -134 177 1 25 51 0 0 chr10 37207576 37207615 -103109150 + AT_rich Low_complexity Low_complexity 1 39 0 316 326 59 27 chr10 37207863 37208050 -103108715 + MIR SINE MIR 57 249 -13 3021 177 40 23 chr10 37210019 37210208 -103106557 + L1M1 LINE L1 4559 4743 -1557 2218 86 0 40 chr10 37210208 37210532 -103106233 + AluY SINE Alu 1 311 0 3021 177 40 23 chr10 37210532 37211368 -103105397 + L1M1 LINE L1 4743 5605 -695 1343 124 11 0 chr10 37211368 37211553 -103105212 + AluSx SINE Alu 21 207 -105 198 0 0 0 chr10 37211767 37211789 -103104976 + (T)n Simple_repeat Simple_repeat 1 22 0 1236 115 37 13 chr10 37211800 37212143 -103104622 - MLT1B LTR MaLR 0 390 1 505 182 152 0 chr10 37212373 37212472 -103104293 - AluJb SINE Alu -195 117 4 495 248 0 9 chr10 37212546 37212655 -103104110 - MER5A DNA MER1_type -75 114 7 3319 191 60 4 chr10 37212703 37213419 -103103346 - LTR39 LTR ERV1 -27 756 1 266 257 14 0 chr10 37213421 37213491 -103103274 - MER45A DNA AcHobo -29 149 79 1815 128 78 0 chr10 37214032 37214313 -103102452 + AluSg SINE Alu 7 309 -1 2070 104 10 17 chr10 37214464 37214761 -103102004 - AluSp SINE Alu -18 295 1 249 108 0 0 chr10 37215867 37215904 -103100861 + (A)n Simple_repeat Simple_repeat 1 37 0 183 42 0 0 chr10 37218345 37218369 -103098396 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 541 167 31 0 chr10 37218373 37218469 -103098296 + MER45A DNA AcHobo 80 178 0 843 243 97 8 chr10 37218874 37218971 -103097794 - MER2 DNA MER2_type 0 345 258 2367 87 3 0 chr10 37218971 37219270 -103097495 - AluSx SINE Alu -12 300 1 843 243 97 8 chr10 37219270 37219439 -103097326 - MER2 DNA MER2_type -87 258 55 1177 195 42 35 chr10 37219983 37220244 -103096521 - AluJo SINE Alu -16 296 34 271 41 41 0 chr10 37222238 37222287 -103094478 - AluSc SINE Alu -1 298 248 1221 174 17 0 chr10 37222389 37222625 -103094140 - L1 LINE L1 -1173 4973 4734 884 132 0 23 chr10 37222651 37222780 -103093985 - FLAM_C SINE Alu -17 126 1 1179 158 14 38 chr10 37222781 37222990 -103093775 + AluJo SINE Alu 109 312 0 2048 98 0 54 chr10 37223671 37223968 -103092797 + AluSx SINE Alu 1 281 -31 246 62 0 0 chr10 37223969 37224001 -103092764 + (TAAG)n Simple_repeat Simple_repeat 4 35 0 201 121 0 0 chr10 37224463 37224496 -103092269 + (A)n Simple_repeat Simple_repeat 1 33 0 508 121 0 30 chr10 37226528 37226627 -103090138 - AluSg/x SINE Alu 0 312 217 1202 126 0 76 chr10 37226727 37226950 -103089815 + AluSp SINE Alu 102 307 -6 1942 123 18 0 chr10 37226955 37227232 -103089533 + AluSg SINE Alu 1 282 -28 623 46 11 0 chr10 37227236 37227323 -103089442 + (CAGAA)n Simple_repeat Simple_repeat 2 89 0 1263 192 55 48 chr10 37227333 37227625 -103089140 + AluJo SINE Alu 1 294 -18 27 0 0 0 chr10 37228062 37228089 -103088676 + GC_rich Low_complexity Low_complexity 1 27 0 207 220 0 0 chr10 37228192 37228242 -103088523 + (CATA)n Simple_repeat Simple_repeat 2 51 0 1875 127 4 4 chr10 37228281 37228549 -103088216 + AluSx SINE Alu 1 268 -44 867 151 0 0 chr10 37230086 37230212 -103086553 + FLAM_C SINE Alu 1 126 -17 451 148 99 0 chr10 37230313 37230394 -103086371 - L2 LINE L2 0 3313 3225 3496 108 44 2 chr10 37230402 37230975 -103085790 + L1PB4 LINE L1 5540 6136 -20 211 294 98 39 chr10 37231802 37231904 -103084861 + MIR3 SINE MIR 49 156 -52 195 254 0 55 chr10 37231958 37232013 -103084752 - MER5B DNA MER1_type -68 110 59 1379 167 29 12 chr10 37233329 37233575 -103083190 + AluJo SINE Alu 42 291 -21 833 237 0 0 chr10 37233932 37234084 -103082681 + FRAM SINE Alu 1 152 -24 1407 146 26 0 chr10 37235175 37235401 -103081364 + AluSg/x SINE Alu 70 301 -9 1116 174 167 3 chr10 37235596 37235883 -103080882 + MER66A LTR ERV1 84 417 -61 405 141 0 0 chr10 37236049 37236120 -103080645 + AluSc SINE Alu 235 305 -4 1468 186 6 48 chr10 37236418 37236729 -103080036 - AluJo SINE Alu -14 298 1 1144 107 6 0 chr10 37237032 37237191 -103079574 - AluSc SINE Alu -18 291 132 2103 131 0 3 chr10 37237191 37237482 -103079283 - AluSc SINE Alu -14 295 6 273 216 54 14 chr10 37237974 37238048 -103078717 + MLT1L LTR MaLR 7 83 -532 332 307 127 0 chr10 37238249 37238399 -103078366 + MLT1L LTR MaLR 423 591 -24 720 230 70 32 chr10 37238546 37238733 -103078032 - MIR SINE MIR -68 194 1 2277 98 13 0 chr10 37238919 37239224 -103077541 - AluSx SINE Alu -3 309 1 22 35 0 0 chr10 37241031 37241060 -103075705 + AT_rich Low_complexity Low_complexity 1 29 0 349 298 70 9 chr10 37242346 37242460 -103074305 + MIR SINE MIR 20 140 -122 23 0 0 0 chr10 37242986 37243009 -103073756 + AT_rich Low_complexity Low_complexity 1 23 0 2396 69 0 0 chr10 37243085 37243373 -103073392 - AluY SINE Alu -22 289 2 367 240 42 0 chr10 37244268 37244364 -103072401 - Charlie1 DNA MER1_type -40 2721 2622 * 601 256 59 27 chr10 37244352 37244571 -103072194 - Charlie1 DNA MER1_type -2524 237 12 1706 181 7 13 chr10 37244688 37244998 -103071767 + AluJo SINE Alu 1 308 -4 219 228 89 13 chr10 37245091 37245170 -103071595 - MIR SINE MIR -20 242 158 741 172 8 16 chr10 37245884 37246006 -103070759 + FLAM_C SINE Alu 1 121 -12 2103 121 3 19 chr10 37246018 37246331 -103070434 + AluSx SINE Alu 4 311 -1 1635 186 16 7 chr10 37247176 37247482 -103069283 - AluJo SINE Alu -3 309 1 187 276 143 0 chr10 37247705 37247803 -103068962 - L2 LINE L2 -5 3267 3156 202 246 261 41 chr10 37248201 37248396 -103068369 - L2 LINE L2 -556 2758 2521 278 264 33 0 chr10 37250290 37250381 -103066384 - L1ME LINE L1 -469 5652 5559 1487 140 5 0 chr10 37250383 37250605 -103066160 - AluSg/x SINE Alu -2 308 86 1359 124 0 0 chr10 37250607 37250785 -103065980 - AluSx SINE Alu -134 178 1 248 0 31 0 chr10 37251232 37251264 -103065501 + (TG)n Simple_repeat Simple_repeat 2 34 0 1366 168 18 46 chr10 37251264 37251544 -103065221 - AluJo SINE Alu -40 272 1 1832 111 111 7 chr10 37251725 37252004 -103064761 - AluSg SINE Alu 0 310 3 394 63 63 0 chr10 37255000 37255079 -103061686 + CT-rich Low_complexity Low_complexity 2 85 0 228 327 95 47 chr10 37255557 37255768 -103060997 - MIR SINE MIR -33 229 9 3777 197 33 46 chr10 37257192 37258046 -103058719 + L1MA7 LINE L1 5410 6252 -39 1740 136 80 0 chr10 37258854 37259118 -103057647 - AluSg SINE Alu -25 285 1 1571 187 27 0 chr10 37259221 37259483 -103057282 + AluJb SINE Alu 1 269 -43 1546 174 4 4 chr10 37260003 37260262 -103056503 + AluJo SINE Alu 1 259 -53 351 0 0 0 chr10 37260276 37260315 -103056450 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 1851 154 23 7 chr10 37260375 37260674 -103056091 + AluJb SINE Alu 2 305 -7 527 230 31 56 chr10 37262546 37262707 -103054058 + MER58B DNA MER1_type 184 340 -1 1680 184 65 96 chr10 37263305 37263783 -103052982 - MLT1C LTR MaLR -4 463 1 1599 167 23 49 chr10 37263790 37264095 -103052670 + AluJo SINE Alu 1 297 -15 251 256 0 44 chr10 37264689 37264779 -103051986 + GA-rich Low_complexity Low_complexity 2 87 0 2327 91 7 0 chr10 37265190 37265487 -103051278 - AluSp SINE Alu -14 299 1 544 134 12 0 chr10 37267699 37267781 -103048984 - MER66A LTR ERV1 0 478 396 2536 70 0 3 chr10 37267781 37268093 -103048672 + AluY SINE Alu 1 311 0 666 264 76 30 chr10 37268117 37268420 -103048345 - MER97c DNA MER1_type? 0 1090 774 22 0 0 0 chr10 37268562 37268584 -103048181 + AT_rich Low_complexity Low_complexity 1 22 0 253 155 41 31 chr10 37268591 37268688 -103048077 + (TA)n Simple_repeat Simple_repeat 2 99 0 2561 122 36 5 chr10 37268692 37269084 -103047681 - MLT2A1 LTR ERVL -40 404 1 448 259 17 0 chr10 37270444 37270560 -103046205 - L1ME3 LINE L1 -56 6106 5989 548 217 101 35 chr10 37270577 37270775 -103045990 - L1ME3 LINE L1 -242 5928 5718 593 226 122 54 chr10 37270781 37271077 -103045688 - MER97c DNA MER1_type? 0 1090 775 1047 208 44 100 chr10 37271430 37271820 -103044945 - MER97a DNA MER1_type? -289 605 238 1384 170 7 73 chr10 37271835 37272135 -103044630 - AluJo SINE Alu -32 280 1 638 249 67 44 chr10 37272152 37272163 -103044602 - MER97c DNA MER1_type? -850 240 231 1596 158 0 85 chr10 37272163 37272492 -103044273 + AluJb SINE Alu 1 301 -11 638 249 67 44 chr10 37272492 37272705 -103044060 - MER97c DNA MER1_type? -859 231 11 481 198 105 129 chr10 37272839 37272915 -103043850 - L1M4 LINE L1 -1925 4221 4145 1778 150 3 39 chr10 37272915 37273221 -103043544 - AluJb SINE Alu -17 295 1 481 198 105 129 chr10 37273221 37273392 -103043373 - L1M4 LINE L1 -2001 4145 3980 21 0 0 0 chr10 37274725 37274746 -103042019 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 37274921 37274943 -103041822 + AT_rich Low_complexity Low_complexity 1 22 0 927 172 0 12 chr10 37275669 37275832 -103040933 + AluJo SINE Alu 127 287 -25 29 47 0 0 chr10 37275832 37275875 -103040890 + AT_rich Low_complexity Low_complexity 1 43 0 27 49 0 0 chr10 37275955 37275996 -103040769 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr10 37276775 37276797 -103039968 + AT_rich Low_complexity Low_complexity 1 22 0 240 200 0 0 chr10 37276841 37276896 -103039869 + CT-rich Low_complexity Low_complexity 2 56 0 2053 119 11 0 chr10 37277100 37277385 -103039380 + AluSx SINE Alu 1 288 -24 2290 104 0 0 chr10 37277385 37277682 -103039083 + AluSg SINE Alu 1 297 -13 5580 105 57 6 chr10 37278293 37278433 -103038332 - L1MA3 LINE L1 0 6305 6174 1833 136 0 11 chr10 37278433 37278705 -103038060 - AluSx SINE Alu -43 269 1 5580 105 57 6 chr10 37278705 37278996 -103037769 - L1MA3 LINE L1 -131 6174 5899 1988 141 10 0 chr10 37278996 37279295 -103037470 - AluSx SINE Alu -10 302 1 5580 105 57 6 chr10 37279295 37279730 -103037035 - L1MA3 LINE L1 -406 5899 5394 24 0 0 0 chr10 37280976 37281000 -103035765 + AT_rich Low_complexity Low_complexity 1 24 0 394 288 45 8 chr10 37282402 37282534 -103034231 + L1MC5 LINE L1 7759 7895 -66 181 315 55 48 chr10 37282611 37282757 -103034008 - MIR3 SINE MIR -37 171 25 294 331 65 0 chr10 37282903 37283042 -103033723 - MIR SINE MIR -3 259 112 232 231 394 0 chr10 37283043 37283251 -103033514 + LTR50 LTR ERVL 1 290 -505 198 103 0 0 chr10 37283331 37283360 -103033405 + (CCCCAG)n Simple_repeat Simple_repeat 6 34 0 2486 67 0 0 chr10 37283719 37284017 -103032748 - AluY SINE Alu -13 298 1 2301 92 0 0 chr10 37284043 37284326 -103032439 + AluSx SINE Alu 1 310 0 244 0 0 0 chr10 37284326 37284353 -103032412 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 586 169 127 17 chr10 37284638 37284756 -103032009 - FLAM_C SINE Alu -1 132 2 582 252 84 0 chr10 37287419 37287574 -103029191 + MIR SINE MIR 21 188 -74 1137 156 12 0 chr10 37288066 37288239 -103028526 - FAM SINE Alu 0 175 1 675 207 8 8 chr10 37289674 37289795 -103026970 + FLAM_A SINE Alu 1 121 -12 2360 106 3 0 chr10 37290836 37291148 -103025617 - AluSp SINE Alu 0 313 1 5789 155 99 6 chr10 37291457 37292249 -103024516 + Tigger3b DNA MER2_type 1 923 -2105 200 35 35 0 chr10 37292249 37292278 -103024487 + (CTCA)n Simple_repeat Simple_repeat 1 30 0 5789 155 99 6 chr10 37292278 37292579 -103024186 + Tigger3b DNA MER2_type 923 1195 -36 663 217 17 0 chr10 37292595 37292710 -103024055 - FLAM_C SINE Alu -22 121 5 1590 164 93 50 chr10 37293206 37293529 -103023236 + MER1B DNA MER1_type 1 337 0 350 248 50 30 chr10 37294625 37294726 -103022039 - L2 LINE L2 -20 3293 3191 863 174 0 112 chr10 37295060 37295284 -103021481 + AluJo SINE Alu 85 283 -29 2083 131 0 0 chr10 37296461 37296743 -103020022 + AluSx SINE Alu 1 282 -30 437 33 0 17 chr10 37296746 37296806 -103019959 + (TAAAA)n Simple_repeat Simple_repeat 2 60 0 2045 144 3 0 chr10 37296814 37297113 -103019652 + AluJo SINE Alu 1 300 -12 1606 126 19 41 chr10 37297536 37297806 -103018959 + AluJo SINE Alu 24 287 -25 1837 146 3 21 chr10 37297866 37298154 -103018611 + AluSx SINE Alu 4 286 -26 444 93 0 0 chr10 37298154 37298229 -103018536 + (CA)n Simple_repeat Simple_repeat 2 76 0 283 195 58 0 chr10 37298367 37298454 -103018311 + MER20B DNA MER1_type 538 629 -154 21 0 0 0 chr10 37298493 37298514 -103018251 + AT_rich Low_complexity Low_complexity 1 21 0 385 181 43 43 chr10 37298568 37298684 -103018081 + MER20B DNA MER1_type 667 782 -1 189 154 0 96 chr10 37299028 37299080 -103017685 + MIR SINE MIR 105 151 -57 756 181 98 0 chr10 37299454 37299587 -103017178 - FRAM SINE Alu -30 146 1 2429 103 0 0 chr10 37300057 37300368 -103016397 + AluSq SINE Alu 1 311 -2 1198 121 59 151 chr10 37302294 37302599 -103014166 - AluJo SINE Alu -15 297 21 963 93 78 0 chr10 37302726 37302855 -103013910 - MER85 DNA T2_type 0 139 1 535 233 170 31 chr10 37302946 37303169 -103013596 - MIR SINE MIR -6 256 3 2219 106 7 0 chr10 37303434 37303737 -103013028 + AluSg SINE Alu 1 305 -5 369 0 0 0 chr10 37303998 37304039 -103012726 + (TG)n Simple_repeat Simple_repeat 2 42 0 1837 83 13 103 chr10 37304039 37304339 -103012426 - AluSg SINE Alu -27 283 11 1964 138 10 21 chr10 37304368 37304658 -103012107 - AluSx SINE Alu -25 287 1 1493 161 54 54 chr10 37304695 37304975 -103011790 + AluJb SINE Alu 1 280 -32 25 0 0 0 chr10 37305595 37305620 -103011145 + AT_rich Low_complexity Low_complexity 1 25 0 2421 87 0 3 chr10 37305667 37305977 -103010788 - AluSg SINE Alu -1 309 1 224 382 100 6 chr10 37306018 37306188 -103010577 - MIR3 SINE MIR -4 204 19 909 251 65 30 chr10 37307285 37307548 -103009217 + MLT1J LTR MaLR 200 471 -40 641 100 20 40 chr10 37308214 37308314 -103008451 + AluY SINE Alu 208 305 -6 3193 145 94 55 chr10 37308316 37308627 -103008138 + L1MA5 LINE L1 5607 5904 -396 1514 191 31 7 chr10 37308627 37308921 -103007844 + AluJo SINE Alu 1 301 -11 3193 145 94 55 chr10 37308921 37308945 -103007820 + L1MA5 LINE L1 5904 5926 -374 2080 115 10 13 chr10 37308945 37309258 -103007507 + AluSx SINE Alu 1 312 0 3193 145 94 55 chr10 37309258 37309589 -103007176 + L1MA5 LINE L1 5926 6300 0 22 56 0 0 chr10 37309821 37309857 -103006908 + AT_rich Low_complexity Low_complexity 1 36 0 2268 121 3 0 chr10 37311016 37311321 -103005444 - AluSx SINE Alu -6 306 1 270 285 173 22 chr10 37311661 37311840 -103004925 - L3 LINE CR1 -12 1565 1360 181 0 0 65 chr10 37313137 37313168 -103003597 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1484 140 13 4 chr10 37313234 37313463 -103003302 - AluSx SINE Alu -81 231 1 237 65 0 0 chr10 37314785 37314816 -103001949 + (T)n Simple_repeat Simple_repeat 1 31 0 2203 101 3 3 chr10 37315668 37315965 -103000800 + AluY SINE Alu 1 297 -14 1791 174 7 3 chr10 37317897 37318201 -102998564 + AluJo SINE Alu 1 305 -7 1841 155 3 10 chr10 37318746 37319072 -102997693 - AluJb SINE Alu 0 312 1 1739 159 50 0 chr10 37320488 37320790 -102995975 + L1PB4 LINE L1 5838 6154 -2 1986 130 7 3 chr10 37320976 37321269 -102995496 + AluSx SINE Alu 1 294 -18 209 171 0 0 chr10 37321272 37321307 -102995458 + G-rich Low_complexity Low_complexity 3 37 0 2816 13 0 0 chr10 37321395 37321696 -102995069 + L1PA2 LINE L1 5855 6155 0 680 208 174 17 chr10 37321808 37322049 -102994716 + MER5C DNA MER1_type 43 321 -3 453 118 49 14 chr10 37322324 37322468 -102994297 + (TA)n Simple_repeat Simple_repeat 1 149 0 902 139 0 29 chr10 37322480 37322617 -102994148 - FLAM_C SINE Alu 0 133 1 632 110 0 0 chr10 37322973 37323055 -102993710 + AluSp SINE Alu 142 223 -90 1018 171 77 124 chr10 37323269 37323595 -102993170 + AluJo SINE Alu 1 312 0 195 42 0 0 chr10 37323638 37323662 -102993103 + (TGG)n Simple_repeat Simple_repeat 1 24 0 1581 226 27 0 chr10 37323763 37324099 -102992666 + L1PA16 LINE L1 5821 6165 -1 463 173 189 8 chr10 37324099 37324226 -102992539 - MIR SINE MIR -85 177 28 242 262 64 52 chr10 37325260 37325432 -102991333 + L2 LINE L2 2562 2735 -579 897 117 0 0 chr10 37325469 37325606 -102991159 + (CA)n Simple_repeat Simple_repeat 2 138 0 213 256 0 0 chr10 37325615 37325658 -102991107 + L2 LINE L2 3210 3252 -20 2097 135 0 0 chr10 37326291 37326588 -102990177 - AluSx SINE Alu -15 297 1 2196 123 0 16 chr10 37327148 37327457 -102989308 + AluSq SINE Alu 1 304 -9 2337 107 0 0 chr10 37327461 37327771 -102988994 + AluSx SINE Alu 1 310 -2 1972 144 10 3 chr10 37328541 37328847 -102987918 - AluJb SINE Alu -4 308 1 210 37 0 0 chr10 37330629 37330656 -102986109 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 838 124 0 0 chr10 37330801 37330914 -102985851 + AluSp/q SINE Alu 181 293 -20 5289 112 60 70 chr10 37330914 37331263 -102985502 + L1PA15 LINE L1 4980 5331 -834 2119 118 7 0 chr10 37331263 37331552 -102985213 + AluSq SINE Alu 1 291 -22 5289 112 60 70 chr10 37331552 37332384 -102984381 + L1PA15 LINE L1 5331 6152 -13 658 121 0 0 chr10 37332396 37332479 -102984286 + AluJb SINE Alu 178 260 -52 23 0 0 0 chr10 37332483 37332506 -102984259 + AT_rich Low_complexity Low_complexity 1 23 0 228 181 0 42 chr10 37332808 37332880 -102983885 + GA-rich Low_complexity Low_complexity 3 71 0 1708 74 28 0 chr10 37333141 37333356 -102983409 - AluY SINE Alu -6 305 85 279 288 68 25 chr10 37333495 37333613 -102983152 - L2 LINE L2 -9 3263 3141 2303 105 0 10 chr10 37333865 37334169 -102982596 + AluSg SINE Alu 1 301 -9 198 103 0 0 chr10 37334230 37334259 -102982506 + (TCC)n Simple_repeat Simple_repeat 2 30 0 282 167 0 0 chr10 37335666 37335726 -102981039 + (CA)n Simple_repeat Simple_repeat 2 61 0 392 248 23 70 chr10 37336092 37336221 -102980544 + MER5A DNA MER1_type 58 180 -9 1484 271 135 45 chr10 37336740 37337171 -102979594 - HAL1 LINE L1 -948 1559 1168 1603 183 20 20 chr10 37337171 37337471 -102979294 - AluJo SINE Alu -12 300 1 1484 271 135 45 chr10 37337471 37338177 -102978588 - HAL1 LINE L1 -1339 1168 319 825 202 45 6 chr10 37338198 37338376 -102978389 - AluJb SINE Alu -8 304 120 24 54 0 18 chr10 37338376 37338406 -102978359 + AT_rich Low_complexity Low_complexity 1 31 -24 2185 87 11 11 chr10 37338406 37338693 -102978072 - AluSq SINE Alu -26 287 1 24 54 0 18 chr10 37338693 37338718 -102978047 + AT_rich Low_complexity Low_complexity 31 55 0 639 174 43 22 chr10 37338724 37338862 -102977903 - AluJo SINE Alu -81 231 91 1453 149 0 0 chr10 37338967 37339175 -102977590 - AluSx SINE Alu -102 210 3 471 215 28 0 chr10 37339200 37339307 -102977458 + L1M4 LINE L1 2664 2773 -3373 1131 159 5 16 chr10 37339864 37340053 -102976712 + AluJo SINE Alu 1 187 -125 4258 188 5 2 chr10 37340054 37340878 -102975887 + L1P LINE L1 4168 4993 -1153 1077 113 7 0 chr10 37340880 37341022 -102975743 + AluSq/x SINE Alu 1 143 -170 1723 174 49 26 chr10 37341123 37341473 -102975292 + THE1C LTR MaLR 18 375 0 860 162 0 0 chr10 37341821 37341957 -102974808 - FLAM_C SINE Alu -7 136 1 1090 196 20 5 chr10 37342943 37343170 -102973595 - AluJo SINE Alu 0 313 84 250 258 38 76 chr10 37344737 37344869 -102971896 + L2 LINE L2 3183 3309 -4 247 231 50 0 chr10 37344928 37345012 -102971753 + MIR SINE MIR 63 142 -66 2094 122 3 0 chr10 37345022 37345308 -102971457 - AluSx SINE Alu -25 287 1 361 282 285 14 chr10 37346055 37346399 -102970366 + L2 LINE L2 2877 3313 0 461 267 222 9 chr10 37346939 37347164 -102969601 + L2 LINE L2 1748 2020 -1294 200 91 68 0 chr10 37347410 37347454 -102969311 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 289 220 0 0 chr10 37347768 37347818 -102968947 + AluJ/monomer SINE Alu 1 50 -250 874 190 0 0 chr10 37347818 37347960 -102968805 + AluJo/FRAM SINE Alu 141 282 -30 2021 137 0 10 chr10 37348775 37349075 -102967690 + AluSx SINE Alu 1 297 -15 652 297 35 18 chr10 37349338 37349419 -102967346 + HAL1 LINE L1 8 86 -2421 387 0 0 0 chr10 37349419 37349462 -102967303 + (TTG)n Simple_repeat Simple_repeat 2 44 0 652 297 35 18 chr10 37349462 37349666 -102967099 + HAL1 LINE L1 86 298 -2209 518 217 11 0 chr10 37349699 37349791 -102966974 + AluJo SINE Alu 2 94 -218 1017 185 0 44 chr10 37449792 37450019 -102866746 + AluJo SINE Alu 87 303 -9 243 125 0 148 chr10 37450031 37450119 -102866646 + L1MC3 LINE L1 6837 6911 -874 2110 127 7 0 chr10 37450195 37450494 -102866271 - AluSq SINE Alu -12 301 1 1482 122 13 4 chr10 37450496 37450725 -102866040 + LTR59 LTR ERV1 320 550 -47 882 137 14 14 chr10 37450759 37450898 -102865867 + FRAM SINE Alu 30 168 -8 888 146 146 0 chr10 37450899 37451063 -102865702 + L1MC3 LINE L1 7212 7399 -386 1805 171 7 0 chr10 37451064 37451393 -102865372 + AluSx SINE Alu 2 332 0 595 167 0 11 chr10 37451825 37451915 -102864850 + AluJ/FLAM SINE Alu 3 91 -221 2065 125 3 10 chr10 37452033 37452330 -102864435 + AluSq SINE Alu 1 295 -18 2083 120 3 3 chr10 37452495 37452795 -102863970 + AluSc SINE Alu 1 300 -9 1345 136 120 44 chr10 37452902 37453152 -102863613 + AluSx SINE Alu 36 304 -8 963 145 0 0 chr10 37453359 37453490 -102863275 - FLAM_C SINE Alu -2 131 1 37 0 0 0 chr10 37453500 37453537 -102863228 + AT_rich Low_complexity Low_complexity 1 37 0 2359 93 20 0 chr10 37453864 37454165 -102862600 + AluSx SINE Alu 1 307 -5 240 226 32 32 chr10 37454204 37454298 -102862467 - L1MD2 LINE L1 -81 6085 6016 315 122 0 0 chr10 37455349 37455390 -102861375 - Alu SINE Alu -254 49 9 1746 111 21 0 chr10 37455391 37455671 -102861094 + AluSx SINE Alu 50 334 0 2067 156 0 0 chr10 37455674 37455981 -102860784 + AluSx SINE Alu 1 307 -5 2279 111 0 0 chr10 37455987 37456285 -102860480 + AluSg SINE Alu 1 298 -12 1841 151 3 30 chr10 37456530 37456697 -102860068 - AluJo SINE Alu -15 297 140 2722 32 3 0 chr10 37456697 37457007 -102859758 - AluY SINE Alu 0 311 1 1841 151 3 30 chr10 37457007 37457144 -102859621 - AluJo SINE Alu -172 140 1 238 280 119 25 chr10 37457293 37457411 -102859354 - MER69A DNA AcHobo -40 137 9 1556 178 4 0 chr10 37457549 37457808 -102858957 + AluJo SINE Alu 1 260 -52 2055 113 4 0 chr10 37458138 37458413 -102858352 - AluSp SINE Alu -37 276 1 238 280 119 25 chr10 37458644 37458762 -102858003 - MER69A DNA AcHobo -40 137 9 2440 56 0 3 chr10 37458900 37459202 -102857563 + AluY SINE Alu 1 301 -10 1851 74 122 11 chr10 37459213 37459484 -102857281 + AluY SINE Alu 1 301 -10 1632 165 72 44 chr10 37459777 37460060 -102856705 + MLT1A1 LTR MaLR 1 301 -64 2199 86 0 49 chr10 37460060 37460387 -102856378 - AluY SINE Alu 0 311 1 1632 165 72 44 chr10 37460387 37460454 -102856311 + MLT1A1 LTR MaLR 301 365 0 2212 92 3 10 chr10 37460707 37461029 -102855736 - AluY SINE Alu 0 311 1 2531 68 0 0 chr10 37461356 37461666 -102855099 + AluY SINE Alu 1 310 -1 362 332 5 87 chr10 37461803 37461931 -102854834 - L2 LINE L2 -604 2710 2602 1905 155 16 7 chr10 37461931 37462240 -102854525 + AluJb SINE Alu 1 312 0 362 332 5 87 chr10 37462240 37462307 -102854458 - L2 LINE L2 -712 2602 2531 1075 194 95 32 chr10 37462377 37462630 -102854135 - MLT1F LTR MaLR -64 478 210 1500 171 4 0 chr10 37462687 37462927 -102853838 + AluJb SINE Alu 2 242 -70 254 118 0 0 chr10 37462968 37463026 -102853739 + AluJb SINE Alu 250 307 0 813 324 119 18 chr10 37463084 37463623 -102853142 - L2 LINE L2 0 3313 2709 1657 169 52 3 chr10 37463647 37463937 -102852828 + AluJb SINE Alu 1 304 -8 1818 180 7 87 chr10 37463977 37464039 -102852726 - MLT1B LTR MaLR -7 383 318 1995 153 3 7 chr10 37464039 37464346 -102852419 + AluSx SINE Alu 3 308 -4 1818 180 7 87 chr10 37464346 37464699 -102852066 - MLT1B LTR MaLR -72 318 1 685 241 169 23 chr10 37464699 37464965 -102851800 - L2 LINE L2 -654 2660 2356 1714 173 7 23 chr10 37465012 37465313 -102851452 - AluJo SINE Alu -16 296 1 1852 119 0 8 chr10 37465361 37465621 -102851144 + AluSx SINE Alu 1 258 -54 319 358 129 52 chr10 37465718 37465911 -102850854 - HAL1 LINE L1 -2077 430 223 1965 293 39 15 chr10 37465982 37466648 -102850117 + L1MEc LINE L1 40 721 -5675 2071 118 30 0 chr10 37466667 37466963 -102849802 + AluSc SINE Alu 1 305 -4 2118 113 0 10 chr10 37466969 37467260 -102849505 + AluSx SINE Alu 1 288 -24 362 265 31 0 chr10 37467480 37467578 -102849187 + MIR SINE MIR 134 234 -28 215 305 168 0 chr10 37467603 37467698 -102849067 + MIR SINE MIR 114 224 -38 195 204 0 0 chr10 37468905 37468949 -102847816 + A-rich Low_complexity Low_complexity 1 44 0 2246 101 0 10 chr10 37469462 37469760 -102847005 + AluSc SINE Alu 1 295 -14 954 281 96 51 chr10 37470042 37470455 -102846310 - L1ME3A LINE L1 -306 5864 5471 2423 71 0 0 chr10 37470455 37470751 -102846014 + AluY SINE Alu 1 296 -15 2338 52 7 0 chr10 37470753 37471058 -102845707 + AluY SINE Alu 1 311 0 954 281 96 51 chr10 37471058 37471462 -102845303 - L1ME3A LINE L1 -699 5471 5000 271 255 167 0 chr10 37471882 37471984 -102844781 + L2 LINE L2 3195 3313 0 230 252 162 27 chr10 37471991 37472039 -102844726 + L1ME LINE L1 5694 5734 -387 2465 76 0 0 chr10 37472039 37472340 -102844425 + AluY SINE Alu 5 305 -6 230 252 162 27 chr10 37472340 37472402 -102844363 + L1ME LINE L1 5734 5819 -302 225 280 27 13 chr10 37472655 37472730 -102844035 - L1ME4a LINE L1 -86 6035 5960 319 273 211 16 chr10 37473217 37473345 -102843420 + L2 LINE L2 3119 3271 -1 24 0 0 0 chr10 37474113 37474137 -102842628 + AT_rich Low_complexity Low_complexity 1 24 0 747 141 33 0 chr10 37474872 37474993 -102841772 + FLAM_C SINE Alu 1 125 -8 342 316 95 52 chr10 37475314 37475662 -102841103 + L2 LINE L2 2951 3313 0 477 268 60 26 chr10 37475768 37475982 -102840783 - MIR SINE MIR 0 262 31 314 292 100 8 chr10 37475977 37476107 -102840658 - L2 LINE L2 -7 3306 3165 * 2364 82 20 7 chr10 37476793 37477098 -102839667 + AluSx SINE Alu 1 309 -3 2103 100 7 14 chr10 37477230 37477519 -102839246 + AluSx SINE Alu 1 287 -25 5256 122 30 14 chr10 37477541 37477611 -102839154 + Tigger1 DNA MER2_type 1577 1644 -774 2489 168 75 103 chr10 37477611 37478326 -102838439 + LTR34 LTR ERV1 1 695 -4 5256 122 30 14 chr10 37478326 37479084 -102837681 + Tigger1 DNA MER2_type 1644 2418 0 469 270 74 20 chr10 37479156 37479304 -102837461 + MIR SINE MIR 13 168 -94 1576 176 26 26 chr10 37479396 37479708 -102837057 + AluJo SINE Alu 1 312 0 1984 108 52 3 chr10 37480610 37480897 -102835868 + AluSx SINE Alu 1 301 -11 852 153 0 29 chr10 37481189 37481326 -102835439 - FLAM_C SINE Alu 0 133 1 379 231 8 66 chr10 37481393 37481514 -102835251 - MIR SINE MIR -104 158 45 1586 137 4 24 chr10 37482163 37482418 -102834347 + AluJb SINE Alu 41 290 -22 186 294 20 0 chr10 37483258 37483309 -102833456 + MIR SINE MIR 63 114 -148 23 0 0 0 chr10 37483323 37483346 -102833419 + AT_rich Low_complexity Low_complexity 1 23 0 261 156 26 39 chr10 37484206 37484283 -102832482 + (TTTA)n Simple_repeat Simple_repeat 2 77 0 895 128 0 0 chr10 37484291 37484408 -102832357 - FLAM_C SINE Alu -18 125 9 594 127 0 0 chr10 37484833 37484912 -102831853 + AluSc SINE Alu 2 80 -229 2211 102 6 13 chr10 37484912 37485225 -102831540 + AluY SINE Alu 1 311 0 1729 104 4 0 chr10 37485225 37485453 -102831312 + AluSc SINE Alu 71 301 -8 28 0 0 0 chr10 37485831 37485859 -102830906 + AT_rich Low_complexity Low_complexity 1 28 0 2124 93 21 7 chr10 37485881 37486172 -102830593 - AluSx SINE Alu -17 295 1 1066 109 64 0 chr10 37486580 37486736 -102830029 + AluSp SINE Alu 141 306 -7 1853 151 24 3 chr10 37487041 37487332 -102829433 + AluSx SINE Alu 1 297 -15 400 105 2 0 chr10 37487385 37487449 -102829316 + Alu SINE Alu 2 50 -262 255 326 68 7 chr10 37487967 37488114 -102828651 - Charlie8 DNA MER1_type -2190 227 72 * 869 258 62 39 chr10 37488111 37488498 -102828267 + L2 LINE L2 2913 3308 -5 2498 73 0 19 chr10 37488862 37489179 -102827586 - AluY SINE Alu 0 311 1 2391 81 0 0 chr10 37489844 37490139 -102826626 - AluY SINE Alu -16 295 1 473 223 38 143 chr10 37490926 37491062 -102825703 - MIR SINE MIR 0 262 160 2261 114 3 9 chr10 37491062 37491377 -102825388 - AluSq SINE Alu 0 313 1 473 223 38 143 chr10 37491377 37491478 -102825287 - MIR SINE MIR -102 160 50 289 281 85 0 chr10 37491531 37491613 -102825152 - L2 LINE L2 -17 3296 3208 1803 117 78 11 chr10 37491976 37492258 -102824507 - AluSx SINE Alu -11 301 1 447 19 0 0 chr10 37493107 37493159 -102823606 + (CA)n Simple_repeat Simple_repeat 2 53 0 25 51 0 0 chr10 37493166 37493205 -102823560 + AT_rich Low_complexity Low_complexity 1 39 0 1311 168 39 58 chr10 37493337 37493647 -102823118 + L1MB7 LINE L1 5594 5897 -287 458 84 0 0 chr10 37493649 37493720 -102823045 + Alu SINE Alu 239 309 -2 1205 146 5 0 chr10 37493740 37493925 -102822840 + AluSg/x SINE Alu 125 310 0 2455 90 3 0 chr10 37493934 37494244 -102822521 + AluSp SINE Alu 1 311 -2 247 196 0 0 chr10 37494259 37494305 -102822460 + L1MC5 LINE L1 7731 7776 -185 2207 105 3 20 chr10 37494694 37494999 -102821766 - AluSp SINE Alu -13 300 1 1733 145 119 21 chr10 37495423 37495760 -102821005 - Tigger7 DNA MER2_type 0 2587 2218 3740 182 38 34 chr10 37495760 37496520 -102820245 - Tigger7 DNA MER2_type -1717 770 8 1745 142 40 4 chr10 37496832 37497153 -102819612 - AluJb SINE Alu 0 331 1 1341 197 3 47 chr10 37497332 37497631 -102819134 + AluJo SINE Alu 3 288 -24 1169 188 14 9 chr10 37498010 37498223 -102818542 + AluJb SINE Alu 1 214 -98 735 139 8 25 chr10 37498425 37498547 -102818218 + FLAM_C SINE Alu 13 132 -11 518 120 0 0 chr10 37498552 37498627 -102818138 + AluJ/FRAM SINE Alu 220 294 -18 452 240 0 0 chr10 37498628 37498724 -102818041 + L1MB4 LINE L1 5827 5922 -258 265 98 0 0 chr10 37498843 37498884 -102817881 + L1MB3 LINE L1 6128 6168 -15 2363 100 10 0 chr10 37499179 37499488 -102817277 + AluSx SINE Alu 1 312 0 1960 208 60 31 chr10 37499505 37500020 -102816745 + L1MC4 LINE L1 6504 7033 -1009 551 157 20 39 chr10 37500023 37500125 -102816640 + FLAM_C SINE Alu 4 103 -40 2102 130 7 0 chr10 37500298 37500582 -102816183 + AluSq SINE Alu 1 286 -27 2071 135 0 7 chr10 37501141 37501445 -102815320 + AluSg SINE Alu 1 302 -8 2345 95 0 7 chr10 37501450 37501754 -102815011 + AluY SINE Alu 1 302 -9 1614 93 14 9 chr10 37501764 37501980 -102814785 + AluY SINE Alu 1 217 -94 198 0 0 0 chr10 37502000 37502022 -102814743 + (A)n Simple_repeat Simple_repeat 1 22 0 975 127 30 18 chr10 37502162 37502327 -102814438 + L1PA16 LINE L1 6000 6166 0 700 110 30 0 chr10 37502340 37502440 -102814325 + AluSq SINE Alu 86 188 -125 391 141 127 0 chr10 37502440 37502511 -102814254 + AluSc SINE Alu 219 298 -1 753 147 0 0 chr10 37502519 37502628 -102814137 + FLAM_C SINE Alu 2 110 -33 1651 148 47 0 chr10 37502633 37502890 -102813875 - AluJb SINE Alu -43 269 1 463 81 0 54 chr10 37502915 37502989 -102813776 + AluSq/x SINE Alu 62 131 -181 226 88 29 0 chr10 37502989 37503050 -102813715 + Alu SINE Alu 249 310 0 1020 165 60 28 chr10 37503357 37503575 -102813190 - AluJo SINE Alu -1 311 87 195 325 192 17 chr10 37503658 37503778 -102812987 + L2 LINE L2 3173 3313 0 288 269 116 76 chr10 37504346 37504531 -102812234 + L2 LINE L2 3021 3222 -91 2276 94 24 0 chr10 37504531 37504829 -102811936 + AluSc SINE Alu 1 305 -4 288 269 116 76 chr10 37504829 37504918 -102811847 + L2 LINE L2 3222 3306 -7 2283 95 3 0 chr10 37505197 37505491 -102811274 + AluSq SINE Alu 1 295 -18 183 42 0 0 chr10 37506571 37506595 -102810170 + (CGG)n Simple_repeat Simple_repeat 2 25 0 23 54 0 0 chr10 37506644 37506681 -102810084 + GC_rich Low_complexity Low_complexity 1 37 0 2042 192 50 62 chr10 37507822 37507927 -102808838 + Charlie1a DNA MER1_type 2 107 -2654 2028 105 7 40 chr10 37507927 37508231 -102808534 - AluSx SINE Alu -18 294 1 1886 138 0 34 chr10 37508239 37508559 -102808206 - AluJo SINE Alu -3 309 1 2042 192 50 62 chr10 37508559 37508919 -102807846 + Charlie1a DNA MER1_type 114 472 -2289 2212 195 92 103 chr10 37508919 37509654 -102807111 + LTR8A LTR ERV1 1 727 0 2042 192 50 62 chr10 37509654 37509693 -102807072 + Charlie1a DNA MER1_type 472 510 -945 1764 161 24 7 chr10 37509695 37509993 -102806772 + AluSq SINE Alu 11 313 0 1150 172 201 9 chr10 37509999 37510342 -102806423 + Charlie1a DNA MER1_type 958 1366 -89 1031 139 0 0 chr10 37510345 37510496 -102806269 + MSTA LTR MaLR 278 428 0 457 128 88 78 chr10 37510496 37510542 -102806223 + Charlie1a DNA MER1_type 1359 1403 -1358 2451 74 3 0 chr10 37510542 37510838 -102805927 - AluSq SINE Alu -16 297 1 457 128 88 78 chr10 37510838 37510887 -102805878 + Charlie1a DNA MER1_type 1403 1455 0 2049 139 3 25 chr10 37511337 37511653 -102805112 + AluSx SINE Alu 1 309 -3 899 199 38 94 chr10 37511881 37511943 -102804822 + L1MEc LINE L1 860 924 -5291 1331 134 29 151 chr10 37511943 37512150 -102804615 - AluYb8 SINE Alu 0 308 160 2316 77 0 48 chr10 37512150 37512460 -102804305 - AluY SINE Alu -16 295 1 1331 134 29 151 chr10 37512460 37512602 -102804163 - AluYb8 SINE Alu -148 160 2 899 199 38 94 chr10 37512602 37512614 -102804151 + L1MEc LINE L1 924 935 -5280 2320 95 13 0 chr10 37512614 37512919 -102803846 - AluSq SINE Alu -4 309 1 899 199 38 94 chr10 37512919 37513169 -102803596 + L1MEc LINE L1 935 1197 -5018 2038 118 0 79 chr10 37513169 37513498 -102803267 + AluSx SINE Alu 1 303 -9 899 199 38 94 chr10 37513498 37513519 -102803246 + L1MEc LINE L1 1197 1218 -4997 2170 104 3 3 chr10 37513519 37513808 -102802957 + AluSg SINE Alu 1 289 -21 899 199 38 94 chr10 37513808 37513851 -102802914 + L1MEc LINE L1 1218 1262 -4953 1825 162 10 7 chr10 37513851 37514159 -102802606 + AluJb SINE Alu 1 309 -3 899 199 38 94 chr10 37514159 37514300 -102802465 + L1MEc LINE L1 1262 1409 -4806 2191 112 0 7 chr10 37514300 37514594 -102802171 + AluSx SINE Alu 1 292 -20 899 199 38 94 chr10 37514594 37514723 -102802042 + L1MEc LINE L1 1409 3543 -2672 2094 104 31 7 chr10 37514924 37515211 -102801554 + AluSc SINE Alu 1 294 -15 282 331 13 13 chr10 37515254 37515411 -102801354 + L1MCc LINE L1 49 205 -6218 1477 161 42 11 chr10 37515509 37515769 -102800996 - AluJo SINE Alu -44 268 1 452 258 93 11 chr10 37515769 37515951 -102800814 + L1MCc LINE L1 2553 2749 -4373 1722 161 40 6 chr10 37516114 37516437 -102800328 - L1MC1 LINE L1 0 6333 6000 380 231 160 6 chr10 37516484 37516640 -102800125 - L1MEd LINE L1 -4885 1234 1055 1240 184 90 30 chr10 37517800 37518116 -102798649 - AluJo SINE Alu 0 332 1 851 213 6 0 chr10 37518471 37518635 -102798130 + AluSg/x SINE Alu 135 299 -10 1797 150 7 17 chr10 37518865 37519159 -102797606 + AluJb SINE Alu 14 304 -8 1398 123 9 23 chr10 37519462 37519681 -102797084 - AluSg/x SINE Alu -11 299 84 235 292 123 32 chr10 37519681 37519835 -102796930 - MIR SINE MIR -32 230 63 1168 152 0 0 chr10 37519907 37520072 -102796693 + AluJb SINE Alu 141 305 -7 258 377 91 7 chr10 37520547 37520701 -102796064 + MIR3 SINE MIR 9 175 -33 366 150 57 121 chr10 37520743 37520862 -102795903 - MIR SINE MIR 0 262 151 1860 163 0 14 chr10 37520862 37521181 -102795584 - AluSx SINE Alu 0 315 1 366 150 57 121 chr10 37521181 37521200 -102795565 - MIR SINE MIR -111 151 132 1147 147 0 12 chr10 37521201 37521371 -102795394 + AluJb SINE Alu 109 276 -36 207 0 0 0 chr10 37521398 37521421 -102795344 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr10 37521497 37521519 -102795246 + AT_rich Low_complexity Low_complexity 1 22 0 229 200 40 20 chr10 37521774 37521824 -102794941 + L2 LINE L2 3207 3257 -15 219 287 45 45 chr10 37521950 37522107 -102794658 - L2 LINE L2 -932 2382 2226 710 224 8 0 chr10 37522295 37522429 -102794336 + FRAM SINE Alu 20 154 -22 655 146 81 24 chr10 37522545 37522668 -102794097 + AluJo SINE Alu 7 136 -176 191 235 0 0 chr10 37523278 37523329 -102793436 - MIR SINE MIR -74 188 138 887 195 54 34 chr10 37523822 37524027 -102792738 - MER6B DNA MER2_type -1 209 1 2041 103 50 0 chr10 37524073 37524354 -102792411 - AluSx SINE Alu -17 295 1 654 146 55 0 chr10 37524380 37524490 -102792275 - FLAM_C SINE Alu -16 117 2 296 250 0 15 chr10 37524605 37524673 -102792092 + MLT1D LTR MaLR 254 320 -185 677 131 16 16 chr10 37524674 37524796 -102791969 + AluSc SINE Alu 150 271 -38 245 349 0 8 chr10 37524944 37525073 -102791692 + C-rich Low_complexity Low_complexity 4 131 0 206 297 18 27 chr10 37525487 37525598 -102791167 + G-rich Low_complexity Low_complexity 3 112 0 2263 74 28 0 chr10 37526093 37526376 -102790389 - AluSg SINE Alu -19 291 1 2593 51 0 6 chr10 37526751 37527063 -102789702 - AluY SINE Alu -1 310 1 2327 102 3 0 chr10 37528153 37528458 -102788307 + AluSp SINE Alu 1 306 -7 1436 189 40 18 chr10 37528744 37529118 -102787647 + Tigger3(Golem) DNA MER2_type 7 3037 0 2135 88 48 10 chr10 37530172 37530467 -102786298 + AluSg SINE Alu 1 306 -4 2038 128 31 0 chr10 37531548 37531838 -102784927 - AluSx SINE Alu -13 299 1 1087 139 47 0 chr10 37532288 37532460 -102784305 - AluSg/x SINE Alu -7 303 124 2200 108 0 3 chr10 37532461 37532756 -102784009 - AluSx SINE Alu -18 294 1 243 164 98 0 chr10 37532866 37532927 -102783838 - L1MC4 LINE L1 -291 7751 7685 2318 108 0 0 chr10 37532995 37533302 -102783463 + AluSx SINE Alu 1 307 -5 368 103 52 0 chr10 37533682 37533740 -102783025 + U7 snRNA snRNA 1 61 -2 726 189 39 0 chr10 37533848 37533975 -102782790 + FLAM_C SINE Alu 2 133 0 180 0 0 0 chr10 37535029 37535049 -102781716 + (T)n Simple_repeat Simple_repeat 1 20 0 1472 209 26 0 chr10 37535084 37535352 -102781413 - AluJb SINE Alu -37 275 1 22 56 0 0 chr10 37535403 37535439 -102781326 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr10 37535936 37535961 -102780804 + AT_rich Low_complexity Low_complexity 1 25 0 180 200 0 0 chr10 37536188 37536228 -102780537 + (TA)n Simple_repeat Simple_repeat 2 41 0 1216 118 28 0 chr10 37536763 37536941 -102779824 - AluSg/x SINE Alu -10 300 118 23 54 0 0 chr10 37536941 37536978 -102779787 + AT_rich Low_complexity Low_complexity 1 37 0 572 168 11 0 chr10 37536979 37537074 -102779691 + AluJ/FLAM SINE Alu 2 97 -215 331 128 0 0 chr10 37537095 37537142 -102779623 + FLAM_A SINE Alu 81 127 -6 30 45 0 0 chr10 37537161 37537205 -102779560 + AT_rich Low_complexity Low_complexity 1 44 0 2052 134 14 0 chr10 37537365 37537657 -102779108 - AluSx SINE Alu -16 296 1 219 292 46 0 chr10 37538144 37538209 -102778556 + MIR SINE MIR 189 256 -6 185 261 102 57 chr10 37538403 37538491 -102778274 - L2 LINE L2 -14 3258 3167 21 0 0 0 chr10 37538703 37538724 -102778041 + AT_rich Low_complexity Low_complexity 1 21 0 504 372 49 42 chr10 37538769 37539196 -102777569 - L2 LINE L2 -36 3236 2807 404 297 48 21 chr10 37539211 37539356 -102777409 + MIR SINE MIR 2 150 -112 283 68 45 0 chr10 37539358 37539402 -102777363 - AluSg SINE Alu -7 295 250 209 225 0 0 chr10 37539449 37539489 -102777276 + MIR SINE MIR 219 258 -4 1679 315 150 38 chr10 37539502 37540855 -102775910 - L2 LINE L2 -529 2785 1585 1839 162 0 7 chr10 37540855 37541145 -102775620 - AluJb SINE Alu -24 288 1 1679 315 150 38 chr10 37541145 37541261 -102775504 - L2 LINE L2 -1729 1585 1483 1916 102 0 0 chr10 37541261 37541506 -102775259 - AluSg SINE Alu -65 245 1 1679 315 150 38 chr10 37541506 37542114 -102774651 - L2 LINE L2 -1831 1483 389 233 273 102 31 chr10 37542691 37542819 -102773946 - L2 LINE L2 -1047 2267 2131 2268 97 7 0 chr10 37543116 37543416 -102773349 + AluSx SINE Alu 1 302 -10 2038 118 16 7 chr10 37543733 37544039 -102772726 + AluSx SINE Alu 1 309 -3 436 301 98 35 chr10 37544085 37544258 -102772507 - MER5A DNA MER1_type -2 187 4 184 247 214 34 chr10 37544279 37544368 -102772397 + L2 LINE L2 3204 3308 -5 270 226 0 75 chr10 37544601 37544694 -102772071 - MER103 DNA DNA -58 108 23 2569 48 0 10 chr10 37545277 37545588 -102771177 - AluY SINE Alu -3 308 1 22 94 0 0 chr10 37545596 37545660 -102771105 + AT_rich Low_complexity Low_complexity 1 64 0 2049 119 71 0 chr10 37546208 37546545 -102770220 - MER46B DNA MER2_type 0 236 1 481 320 120 51 chr10 37547228 37547684 -102769081 - L2 LINE L2 0 3272 2786 450 0 0 0 chr10 37548125 37548175 -102768590 + (CA)n Simple_repeat Simple_repeat 2 51 0 501 158 115 22 chr10 37548181 37548320 -102768445 - L1ME4a LINE L1 -15 6106 5955 757 178 0 22 chr10 37548430 37548565 -102768200 - FLAM_C SINE Alu -1 132 1 1958 147 3 0 chr10 37548775 37549067 -102767698 + AluSx SINE Alu 1 293 -19 191 314 130 46 chr10 37549130 37549391 -102767374 - L2 LINE L2 -1344 1970 1688 1832 152 6 51 chr10 37549571 37549909 -102766856 - AluSx SINE Alu 0 312 1 418 224 96 96 chr10 37551112 37551188 -102765577 - L1MC5 LINE L1 -48 7913 7838 1551 140 41 92 chr10 37551188 37551502 -102765263 + AluJo SINE Alu 1 298 -14 418 224 96 96 chr10 37551502 37551675 -102765090 - L1MC5 LINE L1 -122 7839 7664 853 114 108 6 chr10 37553581 37553747 -102763018 + L1MB2 LINE L1 5985 6167 -4 267 31 0 0 chr10 37553839 37553871 -102762894 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 2026 101 4 14 chr10 37553881 37554158 -102762607 - AluSc SINE Alu -35 274 1 2365 101 0 0 chr10 37554160 37554468 -102762297 - AluY SINE Alu -3 308 1 1826 193 0 10 chr10 37554473 37554779 -102761986 - AluJb SINE Alu -9 303 1 4968 155 26 48 chr10 37555150 37555578 -102761187 + L1 LINE L1 3668 4104 -2042 1944 136 0 16 chr10 37555578 37555886 -102760879 + AluJb SINE Alu 1 303 -9 4968 155 26 48 chr10 37555886 37556526 -102760239 + L1 LINE L1 4104 4713 -1433 219 103 0 0 chr10 37557028 37557067 -102759698 + (T)n Simple_repeat Simple_repeat 1 39 0 3267 154 33 15 chr10 37557510 37558178 -102758587 + L1 LINE L1 4696 5375 -771 354 212 0 0 chr10 37558181 37558247 -102758518 - Tigger3b DNA MER2_type 0 1232 1167 2118 128 37 3 chr10 37558283 37558636 -102758129 - Tigger3b DNA MER2_type -51 1180 816 1167 146 12 6 chr10 37558639 37558810 -102757955 - AluJo SINE Alu -21 291 120 2634 121 136 7 chr10 37558812 37559372 -102757393 - Tigger3b DNA MER2_type -404 827 196 1103 142 12 0 chr10 37559379 37559548 -102757217 - AluSg/x SINE Alu -25 287 117 849 126 16 60 chr10 37559555 37559737 -102757028 + AluSg/x SINE Alu 111 284 -26 16294 42 5 5 chr10 37559912 37561637 -102755128 - L1P2 LINE L1 -640 5514 3786 2259 94 0 10 chr10 37561637 37561936 -102754829 - AluY SINE Alu -15 296 1 16294 42 5 5 chr10 37561936 37562477 -102754288 - L1P2 LINE L1 -2368 3786 3247 2201 119 0 0 chr10 37562833 37563128 -102753637 - AluSx SINE Alu -2 310 16 5414 193 73 30 chr10 37563991 37565290 -102751475 + Charlie1a DNA MER1_type 2 1367 -1394 720 261 77 0 chr10 37565290 37565485 -102751280 - MER63A DNA MER1_type 0 210 1 5414 193 73 30 chr10 37565485 37565572 -102751193 + Charlie1a DNA MER1_type 1367 1449 -6 2309 89 3 0 chr10 37566836 37567129 -102749636 + AluY SINE Alu 1 294 -17 2519 67 0 6 chr10 37568067 37568379 -102748386 - AluY SINE Alu -1 310 1 672 202 0 16 chr10 37569140 37569269 -102747496 - AluJb SINE Alu -185 127 1 313 240 41 50 chr10 37569375 37569496 -102747269 + MIR SINE MIR 72 191 -71 212 259 86 43 chr10 37570374 37570513 -102746252 + L2 LINE L2 3127 3271 -1 227 271 62 54 chr10 37572861 37572990 -102743775 + MIR SINE MIR 68 197 -65 1818 161 10 16 chr10 37573253 37573557 -102743208 + AluJo SINE Alu 1 302 -10 23 0 0 0 chr10 37574068 37574091 -102742674 + AT_rich Low_complexity Low_complexity 1 23 0 2122 109 3 0 chr10 37575453 37575762 -102741003 + AluSq SINE Alu 1 310 0 639 162 0 127 chr10 37575777 37575919 -102740846 + FLAM_A SINE Alu 1 124 -9 297 0 0 0 chr10 37576694 37576727 -102740038 + (TTCA)n Simple_repeat Simple_repeat 2 34 0 2291 83 10 3 chr10 37576764 37577064 -102739701 - AluSp SINE Alu -11 302 1 256 125 45 11 chr10 37578262 37578350 -102738415 + (TA)n Simple_repeat Simple_repeat 1 91 0 304 186 48 0 chr10 37578375 37578542 -102738223 + (TA)n Simple_repeat Simple_repeat 2 176 0 53 30 0 0 chr10 37578542 37578609 -102738156 + AT_rich Low_complexity Low_complexity 1 67 0 483 29 80 51 chr10 37578609 37578784 -102737981 + (TA)n Simple_repeat Simple_repeat 1 180 0 22 0 0 0 chr10 37578784 37578806 -102737959 + AT_rich Low_complexity Low_complexity 1 22 0 1148 143 14 32 chr10 37579041 37579257 -102737508 + AluSg/x SINE Alu 83 294 -16 4547 143 33 15 chr10 37579257 37580135 -102736630 + L1MA8 LINE L1 5393 6286 -5 1930 144 16 13 chr10 37580516 37580822 -102735943 + AluJb SINE Alu 6 312 0 1539 163 95 25 chr10 37580984 37581120 -102735645 + AluJo SINE Alu 1 126 -186 2308 96 6 10 chr10 37581120 37581432 -102735333 + AluSq SINE Alu 1 311 -2 1539 163 95 25 chr10 37581432 37581578 -102735187 + AluJo SINE Alu 126 303 -9 248 304 13 0 chr10 37581776 37581855 -102734910 + MIR SINE MIR 182 261 -1 2062 114 6 25 chr10 37582351 37582666 -102734099 + AluSx SINE Alu 1 309 -3 1912 131 111 3 chr10 37582670 37583030 -102733735 - MSTB LTR MaLR -27 399 1 25 0 0 0 chr10 37583287 37583312 -102733453 + AT_rich Low_complexity Low_complexity 1 25 0 2015 127 7 13 chr10 37583863 37584162 -102732603 + AluSx SINE Alu 1 297 -15 927 163 6 18 chr10 37584162 37584328 -102732437 + AluSq SINE Alu 134 297 -16 2150 113 3 0 chr10 37584442 37584724 -102732041 + AluSx SINE Alu 1 283 -29 1420 17 0 6 chr10 37585481 37585502 -102731263 - L1PA3 LINE L1 -251 5904 5884 14744 49 11 5 chr10 37585502 37587548 -102729217 - L1MB1 LINE L1 -306 5883 3777 2259 94 0 10 chr10 37587548 37587847 -102728918 - AluY SINE Alu -15 296 1 14744 49 11 5 chr10 37587847 37588192 -102728573 - L1MB1 LINE L1 -2412 3777 3436 2659 100 2 9 chr10 37588304 37588725 -102728040 - L1P4 LINE L1 -372 5791 5374 523 258 38 6 chr10 37588733 37588882 -102727883 + L2 LINE L2 1228 1384 -1930 2152 122 0 10 chr10 37588882 37589178 -102727587 - AluSx SINE Alu -18 294 2 2102 298 109 31 chr10 37589292 37589700 -102727065 - HERV16 LTR ERVL -1905 3091 2716 2373 108 13 35 chr10 37589700 37590072 -102726693 - THE1B LTR MaLR 0 364 1 2102 298 109 31 chr10 37590072 37590731 -102726034 - HERV16 LTR ERVL -2280 2716 2240 2311 113 0 7 chr10 37590731 37591040 -102725725 - AluSx SINE Alu -5 307 1 2102 298 109 31 chr10 37591040 37591156 -102725609 - HERV16 LTR ERVL -2756 2240 2134 2357 46 42 3 chr10 37591156 37591441 -102725324 + AluY SINE Alu 1 296 -15 597 269 134 54 chr10 37591448 37591843 -102724922 + L1MC/D LINE L1 5284 5744 -426 1689 131 24 40 chr10 37591843 37592140 -102724625 + AluSq SINE Alu 21 312 -1 597 269 134 54 chr10 37592140 37592243 -102724522 + L1MC/D LINE L1 5744 5837 -333 1961 143 7 0 chr10 37592353 37592646 -102724119 + AluJo SINE Alu 1 295 -17 441 244 79 107 chr10 37592651 37592942 -102723823 + MLT1J LTR MaLR 229 511 0 884 161 0 7 chr10 37593130 37593267 -102723498 - AluJo SINE Alu -176 136 1 191 22 67 44 chr10 37593468 37593513 -102723252 + A-rich Low_complexity Low_complexity 2 47 0 346 309 34 77 chr10 37593965 37594198 -102722567 + L1M4 LINE L1 3695 3917 -2229 2220 94 3 7 chr10 37594399 37594713 -102722052 - AluSx SINE Alu 0 313 1 492 109 0 0 chr10 37594733 37594797 -102721968 - U6 snRNA snRNA -43 64 1 1765 156 10 49 chr10 37595285 37595426 -102721339 + AluJo SINE Alu 1 146 -166 2107 95 35 0 chr10 37595426 37595709 -102721056 + AluSp SINE Alu 1 293 -20 1765 156 10 49 chr10 37595709 37595875 -102720890 + AluJo SINE Alu 146 296 -16 196 256 154 13 chr10 37596208 37596286 -102720479 + MER5A DNA MER1_type 74 162 -27 2316 138 62 7 chr10 37596294 37596700 -102720065 + MSTC LTR MaLR 1 428 0 2354 89 0 7 chr10 37596813 37597117 -102719648 + AluSx SINE Alu 1 302 -10 709 232 12 24 chr10 37597124 37597292 -102719473 + FRAM SINE Alu 1 162 -14 2301 60 0 3 chr10 37597292 37597612 -102719153 + AluY SINE Alu 1 319 0 7289 163 31 75 chr10 37597614 37598214 -102718551 - LTR49-int LTR ERV1 -1915 4416 3791 1965 151 0 0 chr10 37598214 37598506 -102718259 - AluSx SINE Alu -10 302 11 7289 163 31 75 chr10 37598506 37599138 -102717627 - LTR49-int LTR ERV1 -2540 3791 3133 1536 199 0 7 chr10 37599138 37599420 -102717345 + AluJb SINE Alu 29 308 -4 7289 163 31 75 chr10 37599420 37599705 -102717060 - LTR49-int LTR ERV1 -3198 3133 2978 2503 77 3 0 chr10 37599705 37600016 -102716749 + AluSp SINE Alu 1 312 -1 7289 163 31 75 chr10 37600016 37600186 -102716579 - LTR49-int LTR ERV1 -3353 2978 2802 375 181 69 0 chr10 37600204 37600276 -102716489 - LTR49-int LTR ERV1 -4739 1592 1516 369 274 0 0 chr10 37600280 37600353 -102716412 - tRNA-Glu-GAG tRNA tRNA 0 75 3 1966 152 17 51 chr10 37600353 37600645 -102716120 - LTR49-int LTR ERV1 -3271 1609 1309 2168 107 3 10 chr10 37600645 37600945 -102715820 + AluSx SINE Alu 1 298 -14 1966 152 17 51 chr10 37600945 37601339 -102715426 - LTR49-int LTR ERV1 -3571 1309 575 1211 140 0 0 chr10 37601340 37601518 -102715247 + AluSg/x SINE Alu 133 310 -2 1834 168 54 21 chr10 37601519 37601907 -102714858 - LTR49-int LTR ERV1 -4629 1317 15 3158 139 49 37 chr10 37601923 37602081 -102714684 - LTR49 LTR ERV1 0 595 440 2169 102 17 3 chr10 37602081 37602375 -102714390 - AluSx SINE Alu -12 300 3 3158 139 49 37 chr10 37602375 37602386 -102714379 - LTR49 LTR ERV1 -155 440 431 2494 58 0 10 chr10 37602386 37602680 -102714085 - AluY SINE Alu -20 291 1 3158 139 49 37 chr10 37602680 37603097 -102713668 - LTR49 LTR ERV1 -164 431 1 456 188 21 0 chr10 37603343 37603439 -102713326 - MER53 DNA DNA -90 99 2 22 35 0 0 chr10 37603443 37603472 -102713293 + AT_rich Low_complexity Low_complexity 1 29 0 1447 82 10 5 chr10 37603668 37603864 -102712901 - AluSg/x SINE Alu -4 306 110 2233 77 0 21 chr10 37603886 37604192 -102712573 + AluSc SINE Alu 1 300 0 2255 112 3 10 chr10 37604254 37604568 -102712197 + AluSx SINE Alu 1 312 0 1505 147 98 11 chr10 37604581 37604847 -102711918 + AluJo SINE Alu 1 289 -23 411 149 27 0 chr10 37604994 37605068 -102711697 - AluSx SINE Alu -1 311 236 1510 97 0 5 chr10 37605068 37605263 -102711502 - AluSx SINE Alu -118 194 1 873 197 93 73 chr10 37605438 37605593 -102711172 - AluJo SINE Alu -7 295 130 1636 186 0 47 chr10 37605593 37605915 -102710850 - AluJo SINE Alu -5 307 1 873 197 93 73 chr10 37605915 37606048 -102710717 - AluJo SINE Alu -172 130 1 2021 122 36 10 chr10 37606357 37606481 -102710284 + AluSx SINE Alu 1 120 -192 2439 71 0 7 chr10 37606481 37606778 -102709987 + AluY SINE Alu 1 295 -16 2021 122 36 10 chr10 37606778 37606956 -102709809 + AluSx SINE Alu 120 311 -1 972 189 0 0 chr10 37606995 37607159 -102709606 - FRAM SINE Alu -12 164 1 423 292 33 0 chr10 37607350 37607470 -102709295 + L2 LINE L2 3190 3313 0 2792 174 56 33 chr10 37607499 37607564 -102709201 - L1MB2 LINE L1 -4 6167 6105 1903 171 13 0 chr10 37607564 37607868 -102708897 - AluSx SINE Alu -4 308 1 2792 174 56 33 chr10 37607868 37608441 -102708324 - L1MB2 LINE L1 -66 6105 5514 2220 101 0 16 chr10 37608789 37609096 -102707669 + AluSg SINE Alu 1 302 -8 2271 141 95 0 chr10 37609237 37609627 -102707138 - MSTA LTR MaLR -1 427 1 2362 112 0 0 chr10 37609736 37610048 -102706717 + AluSx SINE Alu 1 312 0 1956 144 30 3 chr10 37610718 37611017 -102705748 + AluJo SINE Alu 1 307 -5 2522 61 0 0 chr10 37611017 37611366 -102705399 + AluY SINE Alu 17 365 0 2250 110 0 16 chr10 37611768 37612086 -102704679 + AluSq SINE Alu 1 313 0 818 208 0 0 chr10 37612109 37612263 -102704502 + AluJb SINE Alu 147 300 -12 1439 180 51 31 chr10 37612354 37612648 -102704117 - AluSx SINE Alu -2 300 1 2048 128 0 42 chr10 37613178 37613319 -102703446 + AluSx SINE Alu 5 150 -162 2517 73 0 0 chr10 37613319 37613622 -102703143 + AluY SINE Alu 1 303 -8 2048 128 0 42 chr10 37613622 37613792 -102702973 + AluSx SINE Alu 150 303 -9 517 319 28 22 chr10 37613840 37614022 -102702743 + MER5A DNA MER1_type 7 189 0 570 78 13 0 chr10 37614366 37614443 -102702322 - U6 snRNA snRNA -1 106 29 679 211 0 0 chr10 37614522 37614645 -102702120 + FLAM_C SINE Alu 2 124 -19 1881 181 0 0 chr10 37614996 37615295 -102701470 - AluJb SINE Alu -13 299 1 458 157 22 11 chr10 37615369 37615458 -102701307 - Cheshire DNA MER1_type -16 2404 2315 * 7276 181 41 31 chr10 37615457 37615690 -102701075 - Cheshire DNA MER1_type -343 2077 1848 2589 55 0 3 chr10 37615690 37615999 -102700766 + AluY SINE Alu 1 308 -3 7276 181 41 31 chr10 37615999 37616666 -102700099 - Cheshire DNA MER1_type -572 1848 1189 1430 175 3 92 chr10 37616666 37616981 -102699784 - AluJo SINE Alu -22 290 4 7276 181 41 31 chr10 37616981 37617281 -102699484 - Cheshire DNA MER1_type -1231 1189 894 2520 60 0 7 chr10 37617281 37617583 -102699182 - AluY SINE Alu -11 300 1 7276 181 41 31 chr10 37617583 37617955 -102698810 - Cheshire DNA MER1_type -1526 894 487 1942 148 19 13 chr10 37617957 37618267 -102698498 + AluJb SINE Alu 1 312 0 7148 155 33 90 chr10 37618277 37618724 -102698041 - L1M4 LINE L1 -3267 3115 2644 1831 127 91 7 chr10 37618724 37619000 -102697765 - AluSx SINE Alu -9 303 5 7148 155 33 90 chr10 37619000 37619015 -102697750 - L1M4 LINE L1 -3738 2644 2630 1851 171 0 0 chr10 37619015 37619301 -102697464 - AluJb SINE Alu -26 286 1 7148 155 33 90 chr10 37619301 37619860 -102696905 - L1M4 LINE L1 -3752 2630 2041 2320 94 7 7 chr10 37619860 37620169 -102696596 + AluSg1 SINE Alu 1 309 0 7148 155 33 90 chr10 37620169 37620716 -102696049 - L1M4 LINE L1 -4341 2041 1711 746 220 0 0 chr10 37620716 37620848 -102695917 - FLAM_A SINE Alu -1 132 1 7148 155 33 90 chr10 37620848 37621492 -102695273 - L1M4 LINE L1 -4671 1711 1032 660 109 0 0 chr10 37621492 37621584 -102695181 + AluSg/x SINE Alu 208 299 -13 3580 177 50 33 chr10 37621588 37622069 -102694696 - L1M4 LINE L1 -5620 764 264 2115 96 20 3 chr10 37622069 37622361 -102694404 + AluSg SINE Alu 5 301 -9 3580 177 50 33 chr10 37622361 37622612 -102694153 - L1M4 LINE L1 -6120 264 19 1104 192 123 0 chr10 37622692 37622895 -102693870 - AluJo SINE Alu -84 228 1 2244 108 0 29 chr10 37622902 37623218 -102693547 - AluSx SINE Alu -5 307 1 215 386 0 11 chr10 37623949 37624037 -102692728 + MER5B DNA MER1_type 6 92 -86 1331 221 42 0 chr10 37624256 37624544 -102692221 + AluJb SINE Alu 12 310 0 1408 169 0 66 chr10 37624551 37624646 -102692119 + AluJo SINE Alu 37 137 -175 2169 114 13 7 chr10 37624646 37624944 -102691821 - AluSx SINE Alu -12 300 1 1408 169 0 66 chr10 37624944 37625120 -102691645 + AluJo SINE Alu 137 290 -22 2216 128 0 0 chr10 37625146 37625452 -102691313 + AluSq SINE Alu 1 306 -7 1572 136 21 0 chr10 37625454 37625690 -102691075 + AluSg/x SINE Alu 65 305 -5 1871 158 0 11 chr10 37625730 37626074 -102690691 - AluSx SINE Alu 0 341 1 226 281 16 0 chr10 37626334 37626349 -102690416 + GA-rich Low_complexity Low_complexity 3 16 -51 1869 135 0 50 chr10 37626349 37626488 -102690277 + AluJo SINE Alu 1 145 -167 2555 68 0 3 chr10 37626488 37626798 -102689967 + AluY SINE Alu 1 309 -2 1869 135 0 50 chr10 37626798 37626984 -102689781 + AluJo SINE Alu 145 312 0 226 281 16 0 chr10 37626984 37627032 -102689733 + GA-rich Low_complexity Low_complexity 16 67 0 4043 84 25 4 chr10 37627091 37627649 -102689116 - L1PA11 LINE L1 -4 6170 5601 956 18 0 0 chr10 37627650 37627761 -102689004 - L1PA4 LINE L1 0 6155 6045 2397 82 27 62 chr10 37627761 37628061 -102688704 - L1PA11 LINE L1 -551 5623 5335 1740 117 101 0 chr10 37628061 37628342 -102688423 - AluSx SINE Alu 0 307 1 2397 82 27 62 chr10 37628342 37628520 -102688245 - L1PA11 LINE L1 -839 5335 5152 2213 103 0 67 chr10 37629482 37629813 -102686952 - AluSx SINE Alu -3 309 1 2032 105 72 4 chr10 37630236 37630513 -102686252 + AluSx SINE Alu 4 299 -13 22 0 0 0 chr10 37630965 37630987 -102685778 + AT_rich Low_complexity Low_complexity 1 22 0 297 240 8 83 chr10 37631761 37631882 -102684883 + MIR SINE MIR 20 131 -77 23 0 0 0 chr10 37632679 37632702 -102684063 + AT_rich Low_complexity Low_complexity 1 23 0 1984 152 0 3 chr10 37632772 37633068 -102683697 + AluSx SINE Alu 1 295 -17 782 117 0 8 chr10 37633207 37633327 -102683438 - L1PB3 LINE L1 -1 6153 6035 575 196 0 15 chr10 37633588 37633721 -102683044 - L1MB8 LINE L1 -8 6170 6040 23 0 0 0 chr10 37633764 37633787 -102682978 + AT_rich Low_complexity Low_complexity 1 23 0 1729 174 43 0 chr10 37633788 37634069 -102682696 - AluJo SINE Alu -19 293 1 764 203 44 6 chr10 37634069 37634227 -102682538 + MLT1E LTR MaLR 429 592 -1 496 327 6 0 chr10 37634228 37634393 -102682372 + ERVL LTR ERVL 4214 4379 -1385 1165 147 0 0 chr10 37635126 37635296 -102681469 + FRAM SINE Alu 1 170 -6 306 219 27 14 chr10 37635429 37635502 -102681263 + LTR16A LTR ERVL 56 129 -321 316 289 139 12 chr10 37635557 37635723 -102681042 + LTR16A LTR ERVL 246 432 -18 861 265 183 41 chr10 37635939 37636297 -102680468 + L1M4 LINE L1 3589 3895 -2251 2175 111 46 32 chr10 37636297 37636667 -102680098 + THE1C LTR MaLR 1 375 0 861 265 183 41 chr10 37636667 37637258 -102679507 + L1M4 LINE L1 3895 4673 -1473 1476 184 44 23 chr10 37637258 37637703 -102679062 + MLT1D LTR MaLR 1 505 0 2105 141 10 0 chr10 37637987 37638292 -102678473 + AluSx SINE Alu 1 308 -4 248 275 88 21 chr10 37638307 37638547 -102678218 + L1M4 LINE L1 5024 5279 -867 2133 118 3 20 chr10 37638551 37638855 -102677910 - AluSx SINE Alu -13 299 1 538 125 48 0 chr10 37639321 37639494 -102677271 + (TA)n Simple_repeat Simple_repeat 1 181 0 2087 118 21 0 chr10 37639510 37639797 -102676968 - AluSq SINE Alu -20 293 1 222 37 0 0 chr10 37639898 37639925 -102676840 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 882 120 0 0 chr10 37639925 37640042 -102676723 - AluJb SINE Alu -195 117 1 2213 83 6 51 chr10 37640897 37641211 -102675554 - AluSx SINE Alu -12 300 1 2075 110 3 3 chr10 37641742 37642033 -102674732 - AluSx SINE Alu -1 311 21 351 282 50 28 chr10 37642426 37642607 -102674158 - L1M4 LINE L1 -1029 5117 4933 198 103 0 0 chr10 37642855 37642884 -102673881 + (TAA)n Simple_repeat Simple_repeat 2 30 0 2265 86 10 3 chr10 37642907 37643199 -102673566 - AluY SINE Alu -17 294 1 198 0 0 0 chr10 37643324 37643346 -102673419 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 475 256 88 59 chr10 37643389 37643764 -102673001 - L1M4 LINE L1 -1698 4448 4063 1939 158 0 0 chr10 37644572 37644884 -102671881 - AluSx SINE Alu 0 314 3 894 181 0 12 chr10 37644886 37645046 -102671719 - MLT1A1 LTR MaLR -207 158 1 228 382 221 15 chr10 37645276 37645475 -102671290 + L2 LINE L2 3032 3271 -1 182 103 103 0 chr10 37645623 37645652 -102671113 - MIR SINE MIR -7 255 224 2408 82 10 3 chr10 37646059 37646362 -102670403 + AluSx SINE Alu 5 309 -3 451 179 13 0 chr10 37646654 37646732 -102670033 - MER116 DNA Mariner 0 80 2 243 0 0 0 chr10 37647139 37647166 -102669599 + (TTA)n Simple_repeat Simple_repeat 2 28 0 202 222 0 28 chr10 37647678 37647750 -102669015 + CT-rich Low_complexity Low_complexity 4 73 0 2055 41 49 0 chr10 37649103 37649349 -102667416 - AluY SINE Alu -8 303 46 459 0 0 0 chr10 37649654 37649705 -102667060 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 2365 35 3 21 chr10 37649707 37649994 -102666771 - AluY SINE Alu -29 282 1 519 264 108 22 chr10 37650141 37650372 -102666393 + MER112 DNA MER1_type 2 252 -4 2414 78 0 0 chr10 37650480 37650775 -102665990 + AluSg SINE Alu 1 295 -15 2326 94 3 0 chr10 37651105 37651404 -102665361 + AluSx SINE Alu 1 300 -12 22 56 0 0 chr10 37651636 37651672 -102665093 + AT_rich Low_complexity Low_complexity 1 36 0 214 250 83 0 chr10 37651900 37651960 -102664805 - MIR SINE MIR -147 115 51 2395 90 7 0 chr10 37652125 37652426 -102664339 - AluSq SINE Alu -10 303 1 568 162 86 0 chr10 37652583 37652700 -102664065 + L1MA9 LINE L1 6184 6310 -2 701 223 223 9 chr10 37653574 37653785 -102662980 - MIR SINE MIR -6 256 1 249 263 53 53 chr10 37654177 37654272 -102662493 - L2 LINE L2 -5 3267 3173 876 164 0 0 chr10 37654663 37654791 -102661974 - FLAM_C SINE Alu -4 129 2 441 282 201 10 chr10 37655048 37655257 -102661508 - MARNA DNA Mariner -52 534 286 1867 172 30 0 chr10 37655279 37655582 -102661183 - AluJb SINE Alu 0 312 1 2130 129 0 0 chr10 37655648 37655951 -102660814 + AluSg SINE Alu 1 303 -7 186 71 0 0 chr10 37655952 37655980 -102660785 + (T)n Simple_repeat Simple_repeat 1 28 0 2182 117 7 0 chr10 37656556 37656854 -102659911 + AluSc SINE Alu 1 300 -9 1089 226 124 40 chr10 37657855 37657913 -102658852 - MER63B DNA MER1_type -626 436 384 2079 124 3 3 chr10 37657913 37658204 -102658561 + AluSx SINE Alu 1 291 -21 2603 41 0 0 chr10 37658204 37658497 -102658268 + AluY SINE Alu 1 294 -17 1089 226 124 40 chr10 37658497 37658839 -102657926 - MER63B DNA MER1_type -677 385 1 2345 71 0 7 chr10 37659349 37659645 -102657120 + AluY SINE Alu 3 296 -15 242 104 0 21 chr10 37659672 37659720 -102657045 + (TAAAAA)n Simple_repeat Simple_repeat 3 49 0 2196 103 7 3 chr10 37659730 37660020 -102656745 + AluSc SINE Alu 1 291 -18 33 56 0 0 chr10 37660610 37660664 -102656101 + AT_rich Low_complexity Low_complexity 1 54 0 371 293 98 56 chr10 37660814 37661080 -102655685 - MLT1J LTR MaLR -140 371 95 573 265 70 28 chr10 37661145 37661360 -102655405 - MIR SINE MIR -24 238 15 2253 131 0 0 chr10 37665500 37665805 -102650960 - AluSx SINE Alu -7 305 1 440 230 52 37 chr10 37666395 37666530 -102650235 - MLT1L LTR MaLR -50 565 429 761 105 0 0 chr10 37666615 37666720 -102650045 - AluY SINE Alu -2 309 205 1988 101 4 0 chr10 37667850 37668108 -102648657 - AluSx SINE Alu -53 259 1 960 176 0 75 chr10 37668229 37668416 -102648349 + AluJo SINE Alu 1 173 -139 507 228 132 53 chr10 37668699 37668888 -102647877 - MIR SINE MIR 0 262 59 240 315 111 74 chr10 37669181 37669227 -102647538 - MIR3 SINE MIR -3 205 162 1997 147 0 16 chr10 37669227 37669540 -102647225 - AluJb SINE Alu -4 308 1 240 315 111 74 chr10 37669540 37669655 -102647110 - MIR3 SINE MIR -46 162 38 2412 109 0 0 chr10 37670073 37670385 -102646380 - AluSx SINE Alu 0 312 1 233 190 224 0 chr10 37670501 37670559 -102646206 - MER5A DNA MER1_type -68 121 51 983 150 0 18 chr10 37670566 37670733 -102646032 - AluJb SINE Alu -13 299 136 2078 104 72 0 chr10 37671350 37671629 -102645136 + AluSx SINE Alu 1 299 -13 22 0 0 0 chr10 37672081 37672103 -102644662 + AT_rich Low_complexity Low_complexity 1 22 0 330 240 8 83 chr10 37672877 37672998 -102643767 + MIR SINE MIR 20 131 -77 23 0 0 0 chr10 37673795 37673818 -102642947 + AT_rich Low_complexity Low_complexity 1 23 0 1968 152 0 3 chr10 37673888 37674184 -102642581 + AluSx SINE Alu 1 295 -17 822 117 0 8 chr10 37674323 37674443 -102642322 - L1PB3 LINE L1 -1 6153 6035 602 196 0 15 chr10 37674704 37674837 -102641928 - L1MB8 LINE L1 -8 6170 6040 23 0 0 0 chr10 37674880 37674903 -102641862 + AT_rich Low_complexity Low_complexity 1 23 0 1712 174 43 0 chr10 37674904 37675185 -102641580 - AluJo SINE Alu -19 293 1 764 203 44 6 chr10 37675185 37675343 -102641422 + MLT1E LTR MaLR 429 592 -1 488 327 6 0 chr10 37675344 37675509 -102641256 + ERVL LTR ERVL 4214 4379 -1385 1159 147 0 0 chr10 37676242 37676412 -102640353 + FRAM SINE Alu 1 170 -6 300 219 27 14 chr10 37676545 37676618 -102640147 + LTR16A LTR ERVL 56 129 -321 306 289 139 12 chr10 37676673 37676839 -102639926 + LTR16A LTR ERVL 246 432 -18 956 265 183 41 chr10 37677055 37677413 -102639352 + L1MC/D LINE L1 3589 3895 -2251 2307 111 46 32 chr10 37677413 37677783 -102638982 + THE1C LTR MaLR 1 375 0 956 265 183 41 chr10 37677783 37678374 -102638391 + L1MC/D LINE L1 3895 4673 -1473 1464 184 44 23 chr10 37678374 37678819 -102637946 + MLT1D LTR MaLR 1 505 0 2092 141 10 0 chr10 37679103 37679408 -102637357 + AluSx SINE Alu 1 308 -4 270 275 88 21 chr10 37679423 37679663 -102637102 + L1MC/D LINE L1 5024 5279 -867 2115 118 3 20 chr10 37679667 37679971 -102636794 - AluSx SINE Alu -13 299 1 2359 46 42 0 chr10 37679990 37680274 -102636491 + AluY SINE Alu 1 296 -15 625 270 134 54 chr10 37680281 37680676 -102636089 + L1MC/D LINE L1 5284 5744 -426 1683 131 24 40 chr10 37680676 37680973 -102635792 + AluSq SINE Alu 21 312 -1 625 270 134 54 chr10 37680973 37681076 -102635689 + L1MC/D LINE L1 5744 5837 -333 1942 143 7 0 chr10 37681186 37681479 -102635286 + AluJo SINE Alu 1 295 -17 440 244 79 107 chr10 37681484 37681775 -102634990 + MLT1J LTR MaLR 229 511 0 881 161 0 7 chr10 37681963 37682100 -102634665 - AluJo SINE Alu -176 136 1 191 22 67 44 chr10 37682302 37682347 -102634418 + A-rich Low_complexity Low_complexity 2 47 0 374 295 37 83 chr10 37682748 37683032 -102633733 + L1M4 LINE L1 3649 3917 -2229 2195 94 3 7 chr10 37683233 37683547 -102633218 - AluSx SINE Alu 0 313 1 492 109 0 0 chr10 37683567 37683631 -102633134 - U6 snRNA snRNA -43 64 1 1753 156 10 49 chr10 37684119 37684260 -102632505 + AluJo SINE Alu 1 146 -166 2086 95 35 0 chr10 37684260 37684543 -102632222 + AluSp SINE Alu 1 293 -20 1753 156 10 49 chr10 37684543 37684709 -102632056 + AluJo SINE Alu 146 296 -16 222 268 146 12 chr10 37685041 37685123 -102631642 + MER5A DNA MER1_type 74 166 -23 2436 138 62 7 chr10 37685127 37685533 -102631232 + MSTC LTR MaLR 1 428 0 2331 89 0 7 chr10 37685645 37685949 -102630816 + AluSx SINE Alu 1 302 -10 768 226 12 24 chr10 37685960 37686124 -102630641 + FRAM SINE Alu 1 162 -14 2272 60 0 3 chr10 37686124 37686444 -102630321 + AluY SINE Alu 1 319 0 7391 163 31 75 chr10 37686446 37687046 -102629719 - LTR49-int LTR ERV1 -1915 4416 3791 1951 151 0 0 chr10 37687046 37687338 -102629427 - AluSx SINE Alu -10 302 11 7391 163 31 75 chr10 37687338 37687970 -102628795 - LTR49-int LTR ERV1 -2540 3791 3133 1521 199 0 7 chr10 37687970 37688252 -102628513 + AluJb SINE Alu 29 308 -4 7391 163 31 75 chr10 37688252 37688537 -102628228 - LTR49-int LTR ERV1 -3198 3133 2978 2484 77 3 0 chr10 37688537 37688848 -102627917 + AluSp SINE Alu 1 312 -1 7391 163 31 75 chr10 37688848 37689018 -102627747 - LTR49-int LTR ERV1 -3353 2978 2802 381 181 69 0 chr10 37689036 37689108 -102627657 - LTR49-int LTR ERV1 -4739 1592 1516 367 274 0 0 chr10 37689112 37689185 -102627580 - tRNA-Glu-GAG tRNA tRNA 0 75 3 1980 152 17 51 chr10 37689185 37689477 -102627288 - LTR49-int LTR ERV1 -3271 1609 1309 2184 107 3 7 chr10 37689477 37689776 -102626989 + AluSx SINE Alu 1 298 -14 1980 152 17 51 chr10 37689776 37690170 -102626595 - LTR49-int LTR ERV1 -3571 1309 575 1197 140 0 0 chr10 37690171 37690349 -102626416 + AluSg/x SINE Alu 133 310 -2 1837 168 54 21 chr10 37690350 37690738 -102626027 - LTR49-int LTR ERV1 -4629 1317 15 3164 139 49 37 chr10 37690754 37690912 -102625853 - LTR49 LTR ERV1 0 595 440 2043 102 17 3 chr10 37690912 37691206 -102625559 - AluSx SINE Alu -12 300 3 3164 139 49 37 chr10 37691206 37691217 -102625548 - LTR49 LTR ERV1 -155 440 431 2359 58 0 10 chr10 37691217 37691511 -102625254 - AluY SINE Alu -20 291 1 3164 139 49 37 chr10 37691511 37691928 -102624837 - LTR49 LTR ERV1 -164 431 1 449 188 21 0 chr10 37692174 37692270 -102624495 - MER53 DNA DNA -90 99 2 22 35 0 0 chr10 37692274 37692303 -102624462 + AT_rich Low_complexity Low_complexity 1 29 0 1369 82 10 5 chr10 37692499 37692695 -102624070 - AluSg/x SINE Alu -4 306 110 2105 77 0 21 chr10 37692717 37693023 -102623742 + AluSc SINE Alu 1 300 0 2220 115 0 0 chr10 37693085 37693397 -102623368 + AluSx SINE Alu 1 312 0 1396 147 98 11 chr10 37693410 37693676 -102623089 + AluJo SINE Alu 1 289 -23 1694 90 169 4 chr10 37693837 37694092 -102622673 - AluSx SINE Alu -5 297 1 884 197 93 73 chr10 37694267 37694422 -102622343 - AluJo SINE Alu -7 295 130 1527 186 0 47 chr10 37694422 37694744 -102622021 - AluJo SINE Alu -5 307 1 884 197 93 73 chr10 37694744 37694877 -102621888 - AluJo SINE Alu -172 130 1 1905 122 36 10 chr10 37695186 37695310 -102621455 + AluSx SINE Alu 1 120 -192 2306 71 0 7 chr10 37695310 37695607 -102621158 + AluY SINE Alu 1 295 -16 1905 122 36 10 chr10 37695607 37695785 -102620980 + AluSx SINE Alu 120 311 -1 912 189 0 0 chr10 37695824 37695988 -102620777 - FRAM SINE Alu -12 164 1 459 296 35 14 chr10 37696157 37696299 -102620466 + L2 LINE L2 3169 3313 0 2792 173 60 33 chr10 37696328 37696390 -102620375 - L1MB2 LINE L1 -4 6167 6108 1793 173 13 0 chr10 37696390 37696697 -102620068 - AluSx SINE Alu -1 311 1 2792 173 60 33 chr10 37696697 37697271 -102619494 - L1MB2 LINE L1 -63 6108 5514 2097 101 0 16 chr10 37697619 37697926 -102618839 + AluSg SINE Alu 1 302 -8 2280 141 95 0 chr10 37698067 37698457 -102618308 - MSTA LTR MaLR -1 427 1 2239 112 0 0 chr10 37698566 37698878 -102617887 + AluSx SINE Alu 1 312 0 1843 144 30 3 chr10 37699548 37699847 -102616918 + AluJo SINE Alu 1 307 -5 2396 61 0 0 chr10 37699847 37700196 -102616569 + AluY SINE Alu 17 365 0 2126 110 0 16 chr10 37700598 37700916 -102615849 + AluSq SINE Alu 1 313 0 827 217 0 12 chr10 37700927 37701093 -102615672 + AluJb SINE Alu 137 300 -12 1452 180 51 31 chr10 37701184 37701478 -102615287 - AluSx SINE Alu -2 300 1 1924 128 0 42 chr10 37702008 37702149 -102614616 + AluSx SINE Alu 5 150 -162 2395 73 0 0 chr10 37702149 37702452 -102614313 + AluY SINE Alu 1 303 -8 1924 128 0 42 chr10 37702452 37702622 -102614143 + AluSx SINE Alu 150 303 -9 578 319 28 22 chr10 37702670 37702852 -102613913 + MER5A DNA MER1_type 7 189 0 569 78 13 0 chr10 37703196 37703273 -102613492 - U6 snRNA snRNA -1 106 29 686 211 0 0 chr10 37703352 37703475 -102613290 + FLAM_C SINE Alu 2 124 -19 1766 181 0 0 chr10 37703826 37704125 -102612640 - AluJb SINE Alu -13 299 1 448 157 22 11 chr10 37704199 37704288 -102612477 - Cheshire DNA MER1_type -16 2404 2315 * 7202 182 41 31 chr10 37704287 37704520 -102612245 - Cheshire DNA MER1_type -343 2077 1848 2455 55 0 3 chr10 37704520 37704829 -102611936 + AluY SINE Alu 1 308 -3 7202 182 41 31 chr10 37704829 37705496 -102611269 - Cheshire DNA MER1_type -572 1848 1189 1320 175 3 92 chr10 37705496 37705811 -102610954 - AluJo SINE Alu -22 290 4 7202 182 41 31 chr10 37705811 37706111 -102610654 - Cheshire DNA MER1_type -1231 1189 894 2384 60 0 7 chr10 37706111 37706413 -102610352 - AluY SINE Alu -11 300 1 7202 182 41 31 chr10 37706413 37706785 -102609980 - Cheshire DNA MER1_type -1526 894 487 1935 132 19 13 chr10 37706787 37707097 -102609668 + AluJb SINE Alu 1 312 0 7078 155 33 90 chr10 37707107 37707554 -102609211 - L1M4 LINE L1 -3267 3115 2644 1720 127 91 7 chr10 37707554 37707830 -102608935 - AluSx SINE Alu -9 303 5 7078 155 33 90 chr10 37707830 37707845 -102608920 - L1M4 LINE L1 -3738 2644 2630 1737 171 0 0 chr10 37707845 37708131 -102608634 - AluJb SINE Alu -26 286 1 7078 155 33 90 chr10 37708131 37708690 -102608075 - L1M4 LINE L1 -3752 2630 2041 2192 94 7 7 chr10 37708690 37708999 -102607766 + AluSg1 SINE Alu 1 309 0 7078 155 33 90 chr10 37708999 37709546 -102607219 - L1M4 LINE L1 -4341 2041 1711 752 220 0 0 chr10 37709546 37709678 -102607087 - FLAM_A SINE Alu -1 132 1 7078 155 33 90 chr10 37709678 37710322 -102606443 - L1M4 LINE L1 -4671 1711 1032 663 109 0 0 chr10 37710322 37710414 -102606351 + AluSg/x SINE Alu 205 296 -13 3597 177 50 33 chr10 37710418 37710899 -102605866 - L1M4 LINE L1 -5620 764 264 1991 96 20 3 chr10 37710899 37711191 -102605574 + AluSg SINE Alu 5 301 -9 3597 177 50 33 chr10 37711191 37711442 -102605323 - L1M4 LINE L1 -6120 264 19 1024 192 123 0 chr10 37711522 37711725 -102605040 - AluJo SINE Alu -84 228 1 2110 110 0 28 chr10 37711729 37712048 -102604717 - AluSx SINE Alu -2 310 1 248 386 0 11 chr10 37712779 37712867 -102603898 + MER5B DNA MER1_type 6 92 -86 1236 221 42 0 chr10 37713086 37713374 -102603391 + AluJb SINE Alu 12 310 0 1313 170 0 63 chr10 37713381 37713476 -102603289 + AluJo SINE Alu 37 136 -176 2065 111 13 7 chr10 37713476 37713774 -102602991 - AluSx SINE Alu -12 300 1 1313 170 0 63 chr10 37713774 37713949 -102602816 + AluJo SINE Alu 136 290 -22 2087 128 0 0 chr10 37713975 37714281 -102602484 + AluSq SINE Alu 1 306 -7 1481 136 21 0 chr10 37714283 37714519 -102602246 + AluSg/x SINE Alu 65 305 -5 1751 158 0 11 chr10 37714559 37714898 -102601867 - AluSx SINE Alu 0 336 1 1750 131 0 50 chr10 37715178 37715311 -102601454 + AluJo SINE Alu 7 145 -167 2422 68 0 3 chr10 37715311 37715621 -102601144 + AluY SINE Alu 1 309 -2 1750 131 0 50 chr10 37715621 37715807 -102600958 + AluJo SINE Alu 145 312 0 206 292 0 0 chr10 37715808 37715856 -102600909 + GA-rich Low_complexity Low_complexity 1 48 0 4032 84 25 4 chr10 37715914 37716472 -102600293 - L1PA11 LINE L1 -4 6170 5601 949 18 0 0 chr10 37716473 37716584 -102600181 - L1PA4 LINE L1 0 6155 6045 2386 84 27 62 chr10 37716584 37716884 -102599881 - L1PA11 LINE L1 -551 5623 5335 1627 117 101 0 chr10 37716884 37717165 -102599600 - AluSx SINE Alu 0 307 1 2386 84 27 62 chr10 37717165 37717343 -102599422 - L1PA11 LINE L1 -839 5335 5152 2082 103 0 67 chr10 37718305 37718636 -102598129 - AluSx SINE Alu -3 309 1 2142 97 7 3 chr10 37719039 37719337 -102597428 + AluSq SINE Alu 2 300 -13 838 188 12 24 chr10 37719400 37719565 -102597200 + FRAM SINE Alu 3 165 -1 356 106 0 141 chr10 37720127 37720153 -102596612 - LTR43 LTR ERV1 0 602 574 1524 137 129 14 chr10 37720153 37720431 -102596334 - AluSx SINE Alu -2 310 1 356 106 0 141 chr10 37720431 37720469 -102596296 - LTR43 LTR ERV1 -28 574 550 751 171 0 0 chr10 37720469 37720586 -102596179 + FLAM_C SINE Alu 2 118 -15 356 106 0 141 chr10 37720586 37720605 -102596160 - LTR43 LTR ERV1 -52 550 530 2628 256 48 28 chr10 37720605 37721531 -102595234 - MLT-int LTR MaLR -354 1381 385 1857 136 44 3 chr10 37721546 37721841 -102594924 - AluSx SINE Alu -5 307 1 2107 91 0 3 chr10 37721854 37722140 -102594625 - AluSg SINE Alu -1 309 25 1588 187 18 0 chr10 37722148 37722431 -102594334 - MLT-int LTR MaLR -1320 415 128 556 231 13 51 chr10 37722461 37722617 -102594148 - MLT1A1 LTR MaLR -215 150 1 24 32 0 0 chr10 37722760 37722791 -102593974 + AT_rich Low_complexity Low_complexity 1 31 0 2469 71 0 0 chr10 37722951 37723261 -102593504 - AluY SINE Alu -1 310 1 2907 184 25 2 chr10 37723295 37723817 -102592948 + L1MCa LINE L1 28 561 -5865 633 293 111 28 chr10 37723875 37724199 -102592566 + L2 LINE L2 855 1205 -2109 2095 89 25 0 chr10 37724242 37724523 -102592242 - AluSx SINE Alu -24 288 1 5324 95 41 1 chr10 37724527 37725287 -102591478 - L1PA13 LINE L1 0 6163 5374 539 250 40 0 chr10 37725295 37725443 -102591322 + L2 LINE L2 1228 1381 -1933 2033 122 0 10 chr10 37725444 37725740 -102591025 - AluSx SINE Alu -18 294 2 2994 286 120 38 chr10 37725879 37726262 -102590503 - HERV16 LTR ERVL -1905 3091 2741 2377 108 13 35 chr10 37726262 37726634 -102590131 - THE1B LTR MaLR 0 364 1 2994 286 120 38 chr10 37726634 37727293 -102589472 - HERV16 LTR ERVL -2255 2741 2137 2178 113 0 7 chr10 37727293 37727602 -102589163 - AluSx SINE Alu -5 307 1 2994 286 120 38 chr10 37727602 37727718 -102589047 - HERV16 LTR ERVL -2859 2137 2032 2374 65 0 0 chr10 37727718 37728011 -102588754 + AluY SINE Alu 1 293 -18 2994 286 120 38 chr10 37728011 37728414 -102588351 - HERV16 LTR ERVL -2964 2032 1687 521 325 65 68 chr10 37728411 37728614 -102588151 - HERV16 LTR ERVL -3428 1568 1366 * 1912 156 0 0 chr10 37728614 37728921 -102587844 - AluJo SINE Alu -4 308 2 521 325 65 68 chr10 37728921 37729132 -102587633 - HERV16 LTR ERVL -3630 1366 1155 1323 288 69 46 chr10 37729142 37729796 -102586969 - HERV16 LTR ERVL -3956 1040 372 374 304 52 16 chr10 37730796 37731102 -102585663 - LTR16A LTR ERVL -72 385 18 273 289 77 10 chr10 37731123 37731227 -102585538 + L2 LINE L2 1597 1707 -1607 372 263 35 88 chr10 37731287 37731347 -102585418 - MER76 LTR ERV -43 645 583 2102 129 7 0 chr10 37731347 37731650 -102585115 - AluSx SINE Alu -7 305 1 372 263 35 88 chr10 37731650 37731760 -102585005 - MER76 LTR ERV -105 583 484 1632 199 80 3 chr10 37731789 37732116 -102584649 - MER76 LTR ERV -334 354 3 614 289 28 0 chr10 37732118 37732298 -102584467 + L2 LINE L2 1729 1913 -1401 1285 138 0 0 chr10 37732364 37732553 -102584212 + AluSg/x SINE Alu 82 270 -40 1100 123 0 6 chr10 37732567 37732746 -102584019 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 2676 183 47 39 chr10 37732746 37733516 -102583249 + L1MB8 LINE L1 4893 5655 -529 257 0 30 0 chr10 37733516 37733549 -102583216 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1905 111 0 21 chr10 37733551 37733839 -102582926 - AluSg SINE Alu -28 282 1 2676 183 47 39 chr10 37733839 37734148 -102582617 + L1MB8 LINE L1 5655 6175 -9 581 273 75 0 chr10 37734158 37734345 -102582420 + L2 LINE L2 1902 2102 -1212 1749 151 3 29 chr10 37734351 37734663 -102582102 - AluJo SINE Alu -8 304 1 2120 102 20 3 chr10 37734682 37734987 -102581778 + AluSg SINE Alu 1 310 0 2059 104 0 10 chr10 37735640 37735939 -102580826 - AluY SINE Alu -15 296 1 2007 126 7 0 chr10 37736038 37736348 -102580417 + AluSx SINE Alu 1 312 0 233 302 0 0 chr10 37736354 37736417 -102580348 - L1ME3 LINE L1 -4 6158 6096 212 348 76 0 chr10 37736417 37736509 -102580256 + L2 LINE L2 2088 2186 -1128 356 235 35 35 chr10 37736516 37736631 -102580134 - L1ME1 LINE L1 -65 6101 5987 1930 228 56 17 chr10 37736649 37737241 -102579524 - L1MDa LINE L1 -2780 3760 3146 1731 130 0 63 chr10 37737245 37737561 -102579204 - AluSx SINE Alu -5 307 12 662 190 38 143 chr10 37737562 37737677 -102579088 - L1MDa LINE L1 -3861 2679 2554 1227 141 82 107 chr10 37737677 37737968 -102578797 - AluJo SINE Alu -28 284 1 662 190 38 143 chr10 37737968 37738045 -102578720 - L1MDa LINE L1 -3986 2554 2471 2139 116 3 0 chr10 37738045 37738348 -102578417 - AluSp SINE Alu -9 304 1 662 190 38 143 chr10 37738348 37738596 -102578169 - L1MDa LINE L1 -4069 2471 2287 2037 109 10 0 chr10 37738599 37738892 -102577873 - AluSx SINE Alu -16 296 1 1875 144 0 7 chr10 37738892 37739184 -102577581 - AluSx SINE Alu -10 302 13 25 0 0 0 chr10 37739504 37739529 -102577236 + AT_rich Low_complexity Low_complexity 1 25 0 2517 224 93 81 chr10 37739582 37740052 -102576713 - L1ME1 LINE L1 -17 6149 5686 767 104 0 0 chr10 37740052 37740158 -102576607 - AluSq/x SINE Alu -172 140 35 2517 224 93 81 chr10 37740158 37741803 -102574962 - L1ME1 LINE L1 -480 5686 3959 2128 128 0 16 chr10 37741828 37742134 -102574631 + AluSx SINE Alu 1 301 -11 1997 122 0 7 chr10 37742180 37742459 -102574306 + AluSg SINE Alu 1 277 -33 378 0 0 0 chr10 37742459 37742501 -102574264 + (CA)n Simple_repeat Simple_repeat 1 42 0 1162 140 6 0 chr10 37742501 37742665 -102574100 + AluSg/x SINE Alu 131 295 -17 299 179 113 0 chr10 37742665 37742771 -102573994 - L1ME1 LINE L1 -2197 3949 3832 581 165 50 0 chr10 37742781 37742902 -102573863 - L1MB7 LINE L1 0 6253 6127 842 150 0 8 chr10 37742917 37743044 -102573721 + FLAM_C SINE Alu 2 127 -16 214 182 0 0 chr10 37743046 37743090 -102573675 + A-rich Low_complexity Low_complexity 5 48 0 7701 208 40 24 chr10 37743095 37743247 -102573518 - L1MB7 LINE L1 -134 6119 5971 2131 123 10 3 chr10 37743247 37743540 -102573225 - AluSq SINE Alu -18 295 1 7701 208 40 24 chr10 37743540 37743765 -102573000 - L1MB7 LINE L1 -282 5971 5751 2307 88 3 20 chr10 37743765 37744071 -102572694 - AluSg SINE Alu -9 301 1 7701 208 40 24 chr10 37744071 37744582 -102572183 - L1MB7 LINE L1 -502 5751 5250 2180 101 9 19 chr10 37744582 37744898 -102571867 - AluSq SINE Alu 0 313 1 7701 208 40 24 chr10 37744898 37745012 -102571753 - L1MB7 LINE L1 -1003 5250 5139 2259 112 20 0 chr10 37745012 37745316 -102571449 - AluSq SINE Alu -3 310 1 7701 208 40 24 chr10 37745316 37746025 -102570740 - L1MB7 LINE L1 -1114 5139 4443 2213 113 3 7 chr10 37746025 37746325 -102570440 - AluSx SINE Alu -12 300 2 7701 208 40 24 chr10 37746325 37747256 -102569509 - L1MB7 LINE L1 -1810 4443 3436 963 136 14 0 chr10 37747265 37747412 -102569353 + AluJb SINE Alu 157 305 -7 2416 76 3 3 chr10 37747467 37747768 -102568997 - AluSp SINE Alu -12 301 1 613 186 186 0 chr10 37747768 37747935 -102568830 - L1MB3 LINE L1 -133 6050 5853 1109 160 7 28 chr10 37747937 37748177 -102568588 - L1MB4 LINE L1 -267 5913 5708 * 9783 162 30 34 chr10 37748146 37748538 -102568227 + L1P LINE L1 2872 3264 -2882 1916 159 0 3 chr10 37748538 37748846 -102567919 + AluSx SINE Alu 5 311 -1 9783 162 30 34 chr10 37748846 37750403 -102566362 + L1P LINE L1 3264 4813 -1333 258 267 13 0 chr10 37750404 37750479 -102566286 - L1ME1 LINE L1 -5 6161 6086 225 88 0 0 chr10 37750494 37750528 -102566237 - MER3 DNA MER1_type -160 49 16 1512 208 80 54 chr10 37750528 37750748 -102566017 - L1ME1 LINE L1 -143 6023 5810 1682 168 3 48 chr10 37750748 37751058 -102565707 - AluJo SINE Alu -16 296 1 1512 208 80 54 chr10 37751058 37751336 -102565429 - L1ME1 LINE L1 -356 5810 5512 * 2309 263 57 8 chr10 37751333 37752267 -102564498 - L1MB7 LINE L1 -3316 2899 1962 915 282 61 55 chr10 37752310 37752800 -102563965 - L1MEc LINE L1 -5881 515 23 2300 96 0 10 chr10 37753053 37753344 -102563421 - AluSq SINE Alu -25 288 1 216 234 21 0 chr10 37753393 37753440 -102563325 - MIR SINE MIR -201 61 14 1907 132 13 23 chr10 37753865 37754169 -102562596 - AluJb SINE Alu -11 301 1 2166 90 4 7 chr10 37754176 37754493 -102562272 - AluSc SINE Alu 0 320 5 2389 93 0 0 chr10 37754547 37754847 -102561918 - AluSx SINE Alu -12 300 1 1697 137 48 22 chr10 37755150 37755421 -102561344 + AluJo SINE Alu 1 278 -34 2223 87 4 0 chr10 37755421 37755697 -102561068 - AluSp SINE Alu -17 296 20 353 85 0 34 chr10 37755723 37755734 -102561031 + (GGAA)n Simple_repeat Simple_repeat 4 14 -46 2511 76 3 0 chr10 37755734 37756037 -102560728 + AluSp SINE Alu 3 306 -7 353 85 0 34 chr10 37756037 37756084 -102560681 + (GGAA)n Simple_repeat Simple_repeat 14 60 0 2848 13 0 3 chr10 37756534 37756846 -102559919 - AluYa5 SINE Alu 0 311 1 1028 127 153 0 chr10 37756888 37757077 -102559688 - MER20 DNA MER1_type 0 219 2 2291 117 0 0 chr10 37758273 37758571 -102558194 - AluSx SINE Alu -14 298 1 216 226 48 24 chr10 37758893 37758977 -102557788 + CT-rich Low_complexity Low_complexity 3 88 0 333 333 91 16 chr10 37759305 37759491 -102557274 + MIR SINE MIR 62 261 -1 207 194 0 0 chr10 37759897 37759933 -102556832 + (TATATG)n Simple_repeat Simple_repeat 1 36 0 236 291 0 0 chr10 37759933 37760012 -102556753 - L1MC4 LINE L1 -1340 6702 6624 228 211 0 89 chr10 37759938 37760028 -102556737 + L1MC4 LINE L1 6614 6695 -1347 * 2314 94 3 0 chr10 37760055 37760353 -102556412 - AluSx SINE Alu -13 299 1 193 304 51 11 chr10 37760365 37760452 -102556313 - MIR SINE MIR -66 142 53 1726 164 7 18 chr10 37760503 37760784 -102555981 + AluJo SINE Alu 1 278 -34 189 343 122 14 chr10 37761085 37761371 -102555394 - L2 LINE L2 -785 2529 2213 1900 161 13 0 chr10 37761659 37761957 -102554808 - AluJo SINE Alu -10 302 1 300 106 0 0 chr10 37761980 37762027 -102554738 - L1MA4A LINE L1 -5 6298 6252 222 37 0 0 chr10 37762027 37762054 -102554711 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 2255 85 0 3 chr10 37762054 37762336 -102554429 - AluY SINE Alu -30 281 1 3463 137 48 5 chr10 37762336 37762936 -102553829 - L1MA4 LINE L1 -320 5980 5355 265 232 29 0 chr10 37763025 37763094 -102553671 - Charlie7 DNA MER1_type -1923 689 619 864 121 0 0 chr10 37763095 37763211 -102553554 + AluJb SINE Alu 1 116 -196 450 0 0 0 chr10 37763211 37763261 -102553504 + (CAAAA)n Simple_repeat Simple_repeat 4 53 0 1897 144 0 23 chr10 37763272 37763577 -102553188 + AluJo SINE Alu 6 303 -9 1875 156 0 3 chr10 37763631 37763914 -102552851 + AluJo SINE Alu 1 282 -30 1821 183 0 0 chr10 37763940 37764229 -102552536 + AluJo SINE Alu 1 289 -23 2399 89 0 13 chr10 37764332 37764645 -102552120 + AluY SINE Alu 1 309 -2 838 212 6 0 chr10 37764986 37765151 -102551614 - FRAM SINE Alu 0 166 1 258 291 19 39 chr10 37765239 37765342 -102551423 + MIR SINE MIR 30 130 -78 2001 158 0 10 chr10 37765927 37766237 -102550528 + AluJb SINE Alu 1 307 -5 240 193 217 0 chr10 37766279 37766362 -102550403 - L1ME4a LINE L1 0 6121 6021 2088 124 45 28 chr10 37766422 37766778 -102549987 - THE1B LTR MaLR -2 362 1 28 0 0 0 chr10 37766782 37766810 -102549955 + AT_rich Low_complexity Low_complexity 1 28 0 27 39 0 19 chr10 37767017 37767038 -102549727 + AT_rich Low_complexity Low_complexity 1 21 -30 2335 66 7 0 chr10 37767038 37767325 -102549440 + AluSp SINE Alu 2 290 -23 27 39 0 19 chr10 37767325 37767355 -102549410 + AT_rich Low_complexity Low_complexity 21 51 0 4709 113 26 9 chr10 37767356 37768056 -102548709 - L1PA13 LINE L1 -19 6144 5433 521 223 241 36 chr10 37768056 37768411 -102548354 - L1MB3 LINE L1 -38 6143 5740 2168 103 0 3 chr10 37769101 37769383 -102547382 - AluSx SINE Alu -31 281 1 844 169 0 0 chr10 37769400 37769524 -102547241 - FLAM_C SINE Alu -16 127 4 307 277 64 0 chr10 37769526 37769620 -102547145 - L2 LINE L2 -8 3305 3206 1830 154 7 0 chr10 37770183 37770494 -102546271 + AluJo SINE Alu 1 313 0 215 279 12 12 chr10 37770991 37771077 -102545688 + (TAAAG)n Simple_repeat Simple_repeat 2 87 0 195 42 0 0 chr10 37771091 37771115 -102545650 + (TCCCC)n Simple_repeat Simple_repeat 5 28 0 242 182 0 0 chr10 37771160 37771204 -102545561 - L1M4 LINE L1 -2658 3488 3445 1214 186 43 9 chr10 37771206 37771437 -102545328 - AluJo SINE Alu -19 293 55 723 229 17 40 chr10 37771470 37771670 -102545095 + FRAM SINE Alu 1 176 0 273 303 110 0 chr10 37771672 37771827 -102544938 + L1ME1 LINE L1 3280 3451 -2695 1093 84 0 0 chr10 37771830 37771961 -102544804 + AluSg SINE Alu 1 131 -179 1676 124 0 4 chr10 37771973 37772207 -102544558 + AluSg/x SINE Alu 71 303 -9 5297 205 72 53 chr10 37772207 37773096 -102543669 + L1ME1 LINE L1 3461 4331 -1835 1678 154 95 0 chr10 37773096 37773369 -102543396 + AluJo SINE Alu 1 299 -13 5297 205 72 53 chr10 37773369 37773631 -102543134 + L1ME1 LINE L1 4331 4586 -1580 1872 159 3 20 chr10 37773631 37773927 -102542838 + AluJb SINE Alu 5 295 -17 5297 205 72 53 chr10 37773927 37774314 -102542451 + L1ME1 LINE L1 4586 4964 -1202 2031 117 10 14 chr10 37774314 37774605 -102542160 + AluSc SINE Alu 5 294 -15 5297 205 72 53 chr10 37774605 37775166 -102541599 + L1ME1 LINE L1 4964 5513 -653 2142 114 3 10 chr10 37775166 37775465 -102541300 - AluSx SINE Alu -15 297 1 5297 205 72 53 chr10 37775465 37775973 -102540792 + L1ME1 LINE L1 5513 6112 -54 2086 128 7 3 chr10 37775973 37776269 -102540496 + AluSx SINE Alu 1 297 -15 2252 98 3 0 chr10 37777418 37777704 -102539061 - AluSx SINE Alu -15 297 11 2067 97 45 10 chr10 37777716 37778006 -102538759 - AluSp SINE Alu -13 300 1 1784 169 20 10 chr10 37778033 37778329 -102538436 + AluJo SINE Alu 1 299 -13 235 214 107 0 chr10 37778330 37778386 -102538379 - L1ME1 LINE L1 -5 6161 6100 421 98 16 0 chr10 37778386 37778447 -102538318 - Alu SINE Alu -13 299 238 1537 163 56 11 chr10 37778853 37779123 -102537642 + AluJo SINE Alu 1 282 -30 225 0 0 0 chr10 37779126 37779151 -102537614 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 355 253 102 16 chr10 37779487 37779673 -102537092 - L1MC4a LINE L1 -1896 5912 5711 381 269 56 56 chr10 37781343 37781503 -102535262 + L1ME4a LINE L1 5544 5703 -418 1064 92 0 0 chr10 37781506 37781636 -102535129 + AluY SINE Alu 1 130 -181 366 237 83 26 chr10 37781650 37781806 -102534959 + L1ME4a LINE L1 5698 5862 -259 209 326 54 0 chr10 37782060 37782152 -102534613 - L2 LINE L2 -537 2777 2681 315 259 123 57 chr10 37782784 37782988 -102533777 - MLT1J LTR MaLR -11 500 206 2151 104 3 16 chr10 37782988 37783295 -102533470 - AluSx SINE Alu -9 303 1 315 259 123 57 chr10 37783295 37783370 -102533395 - MLT1J LTR MaLR -305 206 137 194 338 100 25 chr10 37784144 37784224 -102532541 + L2 LINE L2 3139 3224 -48 2410 80 0 0 chr10 37784851 37785140 -102531625 - AluY SINE Alu -22 289 1 693 144 0 18 chr10 37785276 37785387 -102531378 - FRAM SINE Alu -15 161 53 256 148 37 19 chr10 37787192 37787246 -102529519 + MIR3 SINE MIR 103 157 -51 198 0 0 0 chr10 37787565 37787587 -102529178 + (CAAAG)n Simple_repeat Simple_repeat 2 23 0 591 180 49 16 chr10 37787811 37787933 -102528832 + AluJo SINE Alu 1 126 -186 353 140 9 140 chr10 37787986 37788093 -102528672 + AluYa5 SINE Alu 87 179 -122 252 0 9 0 chr10 37788093 37788164 -102528601 + (CA)n Simple_repeat Simple_repeat 2 29 0 1147 131 0 22 chr10 37788165 37788348 -102528417 + AluJo SINE Alu 134 312 0 229 178 27 27 chr10 37788664 37788737 -102528028 + G-rich Low_complexity Low_complexity 4 76 0 24 77 0 0 chr10 37788934 37788986 -102527779 + GC_rich Low_complexity Low_complexity 1 52 0 236 143 18 0 chr10 37789078 37789134 -102527631 + (CCG)n Simple_repeat Simple_repeat 3 59 0 200 161 18 36 chr10 37789187 37789243 -102527522 + C-rich Low_complexity Low_complexity 1 55 0 198 315 14 0 chr10 37790584 37790657 -102526108 + MIR SINE MIR 183 256 -6 241 295 32 11 chr10 37791461 37791556 -102525209 + MER5B DNA MER1_type 82 178 0 206 266 0 16 chr10 37791658 37791722 -102525043 + (TA)n Simple_repeat Simple_repeat 1 63 0 465 285 66 0 chr10 37792283 37792434 -102524331 - MIR SINE MIR -36 226 66 792 263 152 42 chr10 37792722 37792738 -102524027 + L2 LINE L2 2409 2422 -891 2277 113 3 0 chr10 37792738 37793040 -102523725 - AluSx SINE Alu -9 303 1 792 263 152 42 chr10 37793040 37793833 -102522932 + L2 LINE L2 2422 3309 -4 309 261 11 11 chr10 37794774 37794862 -102521903 - MIR3 SINE MIR -39 169 82 338 271 34 8 chr10 37794953 37795071 -102521694 - MIR SINE MIR -108 154 34 2136 104 52 3 chr10 37795237 37795525 -102521240 - AluSx SINE Alu -10 302 1 2360 108 0 0 chr10 37795619 37795926 -102520839 - AluSq SINE Alu -6 307 1 1932 94 27 106 chr10 37796646 37796805 -102519960 + AluYb8 SINE Alu 1 122 -196 6353 28 1 8 chr10 37796805 37797549 -102519216 - L1PA4 LINE L1 0 6155 5417 1932 94 27 106 chr10 37797549 37797720 -102519045 + AluYb8 SINE Alu 122 305 -13 1883 120 22 4 chr10 37798879 37799153 -102517612 - AluJo SINE Alu -23 289 11 221 0 0 33 chr10 37799185 37799215 -102517550 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 335 254 36 27 chr10 37799219 37799329 -102517436 - MARNA DNA Mariner -381 205 95 1154 190 49 9 chr10 37801198 37801424 -102515341 - MER8 DNA MER2_type -4 235 1 542 185 136 82 chr10 37801897 37802081 -102514684 - MER20 DNA MER1_type 0 219 26 21 57 0 0 chr10 37803906 37803941 -102512824 + AT_rich Low_complexity Low_complexity 1 35 0 191 362 78 7 chr10 37804840 37804981 -102511784 - L2 LINE L2 -42 3230 3080 1940 166 0 3 chr10 37805155 37805457 -102511308 - AluJb SINE Alu -5 307 7 1363 204 123 110 chr10 37806044 37806421 -102510344 - MLT1F1 LTR MaLR 0 567 154 2216 117 3 0 chr10 37806421 37806721 -102510044 - AluSx SINE Alu -11 301 1 1363 204 123 110 chr10 37806721 37806878 -102509887 - MLT1F1 LTR MaLR -413 154 1 2316 113 0 3 chr10 37807632 37807943 -102508822 + AluSx SINE Alu 2 311 -1 21 0 0 0 chr10 37807973 37807994 -102508771 + AT_rich Low_complexity Low_complexity 1 21 0 485 312 139 20 chr10 37809074 37809398 -102507367 + L2 LINE L2 2715 2999 -314 351 89 0 0 chr10 37809398 37809454 -102507311 + (CCCCAG)n Simple_repeat Simple_repeat 4 59 0 485 312 139 20 chr10 37809454 37809652 -102507113 + L2 LINE L2 2999 3309 -4 2200 173 199 22 chr10 37809698 37810292 -102506473 - L1MC4 LINE L1 -458 7584 6886 21 0 0 0 chr10 37810452 37810473 -102506292 + AT_rich Low_complexity Low_complexity 1 21 0 1790 228 87 27 chr10 37810830 37811357 -102505408 - REP3 LTR ERV 0 562 4 2920 146 42 43 chr10 37811684 37811728 -102505037 - L1MB3 LINE L1 -9 6174 6131 207 0 0 0 chr10 37811728 37811751 -102505014 + (TTA)n Simple_repeat Simple_repeat 2 24 0 725 189 0 0 chr10 37811751 37811873 -102504892 - FLAM_C SINE Alu -7 126 5 2920 146 42 43 chr10 37811873 37812381 -102504384 - L1MB3 LINE L1 -50 6133 5622 1943 166 16 0 chr10 37812511 37812818 -102503947 - AluJo SINE Alu 0 312 1 23 54 0 0 chr10 37812930 37812967 -102503798 + AT_rich Low_complexity Low_complexity 1 37 0 2207 110 7 0 chr10 37813101 37813393 -102503372 - AluSg SINE Alu -16 294 1 309 314 105 14 chr10 37813426 37813636 -102503129 - L1ME4a LINE L1 -129 5992 5764 451 127 0 0 chr10 37814038 37814101 -102502664 + MER46B DNA MER2_type 3 65 -296 1570 129 95 24 chr10 37814136 37814431 -102502334 + MER46B DNA MER2_type 45 235 -1 1665 174 37 38 chr10 37814957 37815721 -102501044 - SVA Other Other -518 868 388 790 168 51 30 chr10 37817890 37818087 -102498678 + L1MD3 LINE L1 7779 7979 -16 1220 170 15 0 chr10 37818940 37819146 -102497619 + MER3 DNA MER1_type 1 209 0 239 284 147 0 chr10 37819367 37819469 -102497296 - L1ME LINE L1 -219 5902 5786 417 222 210 18 chr10 37819546 37819713 -102497052 + MIR SINE MIR 64 262 0 194 326 65 11 chr10 37820409 37820501 -102496264 + MIR SINE MIR 33 129 -79 192 77 0 0 chr10 37822338 37822364 -102494401 + (CATATA)n Simple_repeat Simple_repeat 1 26 0 2524 57 0 0 chr10 37822391 37822687 -102494078 - AluY SINE Alu -15 296 1 2393 87 0 0 chr10 37822951 37823251 -102493514 - AluY SINE Alu -11 300 1 187 323 73 10 chr10 37823350 37823446 -102493319 + L2 LINE L2 3139 3240 -32 2255 102 7 0 chr10 37824941 37825234 -102491531 - AluSq SINE Alu -18 295 1 421 309 59 15 chr10 37825369 37825573 -102491192 + MIR SINE MIR 36 248 -14 2119 159 50 10 chr10 37825770 37826154 -102490611 + Tigger2a DNA MER2_type 36 434 0 26 0 0 0 chr10 37826500 37826526 -102490239 + AT_rich Low_complexity Low_complexity 1 26 0 1842 193 55 38 chr10 37827332 37827784 -102488981 - MLT1D LTR MaLR 0 505 46 3002 171 112 22 chr10 37828377 37828430 -102488335 - Charlie1 DNA MER1_type 0 2761 2714 3626 149 22 11 chr10 37828430 37828702 -102488063 + L1MB7 LINE L1 5518 5786 -398 1475 157 8 8 chr10 37828702 37828938 -102487827 + MER46A DNA MER2_type 1 236 0 3626 149 22 11 chr10 37828938 37829258 -102487507 + L1MB7 LINE L1 5786 6120 -64 3575 140 43 12 chr10 37829258 37829842 -102486923 + MER7C DNA MER2_type 1 602 0 3626 149 22 11 chr10 37829842 37829891 -102486874 + L1MB7 LINE L1 6120 6167 -17 3002 171 112 22 chr10 37829891 37830593 -102486172 - Charlie1 DNA MER1_type -47 2714 1938 222 374 15 33 chr10 37830933 37831128 -102485637 - MIR SINE MIR -51 211 25 1620 175 59 27 chr10 37831286 37831691 -102485074 - LTR52 LTR ERVL -3 418 1 234 233 55 27 chr10 37832741 37832814 -102483951 - L1MC5 LINE L1 -50 7911 7837 369 265 15 23 chr10 37832849 37832981 -102483784 - MIR SINE MIR -51 211 81 2701 209 127 27 chr10 37833226 37833514 -102483251 + MER97a DNA MER1_type 1 259 -635 2333 94 0 19 chr10 37833514 37833823 -102482942 + AluSx SINE Alu 1 303 -9 2701 209 127 27 chr10 37833823 37834347 -102482418 + MER97a DNA MER1_type 259 894 0 815 185 57 38 chr10 37834721 37834932 -102481833 + MER20 DNA MER1_type 1 215 -4 382 244 23 38 chr10 37834932 37835063 -102481702 + MIR SINE MIR 86 214 -48 831 270 39 13 chr10 37835209 37835442 -102481323 - MER8 DNA MER2_type 0 239 1 2342 108 3 0 chr10 37835539 37835844 -102480921 - AluSq SINE Alu -7 306 1 241 198 77 33 chr10 37836070 37836161 -102480604 + MER103 DNA DNA 11 105 -61 22 0 0 0 chr10 37836189 37836211 -102480554 + AT_rich Low_complexity Low_complexity 1 22 0 3053 108 19 13 chr10 37836367 37836829 -102479936 - MER4C LTR ERV1 0 465 1 413 188 148 16 chr10 37837658 37837786 -102478979 + MER97a DNA MER1_type? 545 689 -205 439 226 11 21 chr10 37837790 37837883 -102478882 - L1ME LINE L1 -585 5579 5488 1912 212 56 25 chr10 37840894 37841379 -102475386 - MLT1D LTR MaLR 0 505 6 222 118 0 0 chr10 37841459 37841493 -102475272 + (CTA)n Simple_repeat Simple_repeat 2 35 0 211 253 84 21 chr10 37841515 37841610 -102475155 + L2 LINE L2 3162 3262 -10 2203 114 7 0 chr10 37841676 37841973 -102474792 - AluSg SINE Alu -11 299 1 22 0 0 0 chr10 37843037 37843059 -102473706 + AT_rich Low_complexity Low_complexity 1 22 0 224 155 0 155 chr10 37843220 37843278 -102473487 + MIR SINE MIR 56 104 -158 3017 120 17 69 chr10 37843283 37843875 -102472890 - LTR10A LTR ERV1 -48 561 1 296 312 43 0 chr10 37843887 37843980 -102472785 + MIR SINE MIR 120 216 -46 221 325 0 12 chr10 37844027 37844110 -102472655 + CT-rich Low_complexity Low_complexity 3 84 0 309 193 18 0 chr10 37844297 37844354 -102472411 - L1ME4a LINE L1 -9 6112 6055 298 311 77 68 chr10 37844566 37844801 -102471964 - L2 LINE L2 -44 3228 2992 969 211 55 7 chr10 37845070 37845451 -102471314 + MER31B LTR ERV1 1 466 0 695 124 124 0 chr10 37846041 37846154 -102470611 + FLAM_A SINE Alu 4 130 -3 1218 178 22 109 chr10 37847490 37847982 -102468783 - MER31A LTR ERV1 0 466 1 290 323 71 8 chr10 37848265 37848392 -102468373 + L2 LINE L2 3137 3271 -1 809 164 0 22 chr10 37900439 37900573 -102416192 - FLAM_C SINE Alu -1 132 2 2136 191 81 37 chr10 37901341 37901833 -102414932 + MER68 LTR ERV1 1 514 -48 210 360 35 0 chr10 37902626 37902712 -102414053 - L2 LINE L2 -1 3271 3183 618 255 99 5 chr10 37902766 37902958 -102413807 + MIR SINE MIR 23 232 -30 378 271 300 18 chr10 37903127 37904719 -102412046 - L2 LINE L2 -438 2876 836 959 159 0 0 chr10 37905706 37905857 -102410908 - AluJo SINE Alu -30 282 132 200 280 43 75 chr10 37905935 37906028 -102410737 + L2 LINE L2 3152 3241 -31 547 280 151 11 chr10 37906486 37906757 -102410008 - L1M4 LINE L1 -1907 4239 3931 561 252 98 138 chr10 37906810 37906931 -102409834 - L1MEd LINE L1 -5069 1050 926 2116 182 3 11 chr10 37906931 37907293 -102409472 - MLT1A1 LTR MaLR -4 361 3 561 252 98 138 chr10 37907293 37908254 -102408511 - L1MEd LINE L1 -5193 926 12 222 236 0 42 chr10 37908409 37908481 -102408284 + GA-rich Low_complexity Low_complexity 3 71 0 181 194 16 16 chr10 37908481 37908543 -102408222 + (CAGA)n Simple_repeat Simple_repeat 2 63 0 474 348 3 0 chr10 37908583 37908801 -102407964 + GA-rich Low_complexity Low_complexity 1 218 0 200 225 0 11 chr10 37908952 37909041 -102407724 + GA-rich Low_complexity Low_complexity 1 88 0 243 0 0 0 chr10 37909510 37909537 -102407228 + (CTCA)n Simple_repeat Simple_repeat 1 27 0 323 167 0 94 chr10 37910128 37910224 -102406541 - L1ME4a LINE L1 -2 6119 6033 1162 161 45 36 chr10 37910285 37910509 -102406256 - MER46A DNA MER2_type -10 226 1 865 135 7 50 chr10 37911154 37911295 -102405470 - AluJo SINE Alu -177 135 1 350 312 64 50 chr10 37911577 37911795 -102404970 - MIR SINE MIR -11 251 31 487 255 67 27 chr10 37912904 37913053 -102403712 - MER104 DNA Tc2 -21 159 5 2360 70 27 3 chr10 37913508 37913808 -102402957 + AluY SINE Alu 1 307 -4 392 127 14 14 chr10 37915001 37915072 -102401693 + Charlie2a DNA MER1_type 1467 1537 -1325 272 154 19 0 chr10 37915128 37915180 -102401585 + Charlie2a DNA MER1_type 1523 1575 -1287 195 100 0 0 chr10 37916841 37916871 -102399894 + (A)n Simple_repeat Simple_repeat 1 30 0 1210 191 158 0 chr10 37917054 37917300 -102399465 - AluJo SINE Alu -20 292 8 395 249 76 83 chr10 37917307 37917584 -102399181 - L1ME4a LINE L1 -212 5909 5635 351 280 106 18 chr10 37917892 37918110 -102398655 + MER112 DNA MER1_type 17 253 -7 230 262 78 10 chr10 37919518 37919648 -102397117 + MIR SINE MIR 6 145 -76 961 173 0 62 chr10 37919874 37920053 -102396712 - FRAM SINE Alu -9 167 1 2334 82 10 10 chr10 37921654 37921948 -102394817 - AluY SINE Alu -17 294 1 312 214 36 62 chr10 37922618 37922730 -102394035 - L2 LINE L2 -55 3258 3150 1496 118 41 0 chr10 37923363 37923583 -102393182 - MER30 DNA MER1_type 0 230 2 214 246 0 0 chr10 37924231 37924288 -102392477 + MIR SINE MIR 65 121 -141 499 69 0 28 chr10 37924491 37924563 -102392202 + MER30 DNA MER1_type 1 70 -160 224 286 52 13 chr10 37924589 37924666 -102392099 + MIR SINE MIR 168 247 -15 2508 164 55 2 chr10 37925272 37925729 -102391036 - MER31A LTR ERV1 0 485 5 286 311 179 10 chr10 37927225 37927421 -102389344 + MIR SINE MIR 28 256 -6 21 0 0 0 chr10 37928665 37928686 -102388079 + AT_rich Low_complexity Low_complexity 1 21 0 353 315 67 17 chr10 37931639 37931817 -102384948 - MIR SINE MIR -2 260 74 306 238 20 82 chr10 37931983 37932130 -102384635 + L2 LINE L2 3163 3300 -13 231 36 0 0 chr10 37932130 37932158 -102384607 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 42882 34 30 2 chr10 37933315 37939303 -102377462 + L1PA3 LINE L1 1 6155 0 1909 156 3 7 chr10 37940215 37940503 -102376262 + AluJo SINE Alu 1 287 -25 657 286 89 19 chr10 37941961 37942161 -102374604 - MER102b DNA MER1_type -1091 337 106 470 17 17 0 chr10 37942161 37942220 -102374545 + (TG)n Simple_repeat Simple_repeat 2 61 0 657 286 89 19 chr10 37942220 37942334 -102374431 - MER102b DNA MER1_type -1322 106 1 425 38 0 0 chr10 37943911 37943964 -102372801 - MADE1 DNA Mariner 0 80 28 195 276 37 52 chr10 37944381 37944515 -102372250 + L2 LINE L2 1545 1676 -1638 22 56 0 0 chr10 37944808 37944844 -102371921 + AT_rich Low_complexity Low_complexity 1 36 0 2679 58 0 0 chr10 37944854 37945163 -102371602 + AluY SINE Alu 1 309 -2 212 333 10 29 chr10 37945415 37945517 -102371248 + L2 LINE L2 2260 2359 -955 822 200 60 0 chr10 37945634 37945784 -102370981 - MER63 DNA MER1_type -277 785 1 260 370 20 0 chr10 37945832 37945932 -102370833 + L2 LINE L2 2542 2643 -671 850 243 90 23 chr10 37947936 37948236 -102368529 - Charlie2 DNA MER1_type 0 2862 2543 2133 120 82 15 chr10 37948376 37948717 -102368048 - THE1B LTR MaLR 0 364 1 452 245 127 42 chr10 37952833 37953045 -102363720 - MIR SINE MIR 0 262 33 2041 132 0 0 chr10 37953847 37954162 -102362603 - AluSx SINE Alu 0 315 1 274 307 94 16 chr10 37954757 37954884 -102361881 + MIR SINE MIR 28 164 -98 2336 262 51 26 chr10 37955027 37955797 -102360968 - L1MC4 LINE L1 -553 7489 6701 1857 149 98 0 chr10 37955913 37956261 -102360504 - L1MB7 LINE L1 0 6184 5803 2141 115 0 0 chr10 37956475 37956753 -102360012 - AluSx SINE Alu -34 278 1 1814 184 0 7 chr10 37957388 37957692 -102359073 - AluJo SINE Alu -8 304 3 238 260 226 20 chr10 37957799 37957945 -102358820 - MIR SINE MIR -3 259 84 330 318 0 0 chr10 37957969 37958054 -102358711 + MER94 DNA DNA 49 133 -1 281 292 62 0 chr10 37958058 37958154 -102358611 - MIR3 SINE MIR -102 106 5 235 309 127 33 chr10 37958739 37958920 -102357845 + MIR SINE MIR 24 221 -41 182 323 156 11 chr10 37959403 37959666 -102357099 - L2 LINE L2 -978 2336 2036 555 229 7 46 chr10 37960732 37960885 -102355880 - MIR SINE MIR -40 222 76 198 0 0 0 chr10 37961253 37961275 -102355490 + (A)n Simple_repeat Simple_repeat 1 22 0 180 0 0 0 chr10 37963819 37963839 -102352926 + (TTCC)n Simple_repeat Simple_repeat 1 20 0 243 0 0 0 chr10 37963839 37963866 -102352899 + (T)n Simple_repeat Simple_repeat 1 27 0 22 0 0 0 chr10 37964093 37964115 -102352650 + AT_rich Low_complexity Low_complexity 1 22 0 394 286 32 8 chr10 37965454 37965580 -102351185 - MER5B DNA MER1_type -5 173 45 195 291 0 0 chr10 37965580 37965635 -102351130 - MER5B DNA MER1_type -82 96 42 188 298 0 0 chr10 37965734 37965791 -102350974 - MER5B DNA MER1_type -80 98 42 * 191 298 0 0 chr10 37965786 37965843 -102350922 - MER5B DNA MER1_type -80 98 42 * 212 281 0 0 chr10 37965838 37965895 -102350870 - MER5B DNA MER1_type -80 98 42 188 298 0 0 chr10 37965994 37966051 -102350714 - MER5B DNA MER1_type -80 98 42 * 191 298 0 0 chr10 37966046 37966103 -102350662 - MER5B DNA MER1_type -80 98 42 188 298 0 0 chr10 37966098 37966155 -102350610 - MER5B DNA MER1_type -80 98 42 * 188 298 0 0 chr10 37966254 37966311 -102350454 - MER5B DNA MER1_type -80 98 42 186 298 0 0 chr10 37966306 37966363 -102350402 - MER5B DNA MER1_type -80 98 42 * 188 298 0 0 chr10 37966514 37966571 -102350194 - MER5B DNA MER1_type -80 98 42 333 290 11 0 chr10 37966618 37966711 -102350054 - MER5B DNA MER1_type -80 98 5 1750 147 68 3 chr10 37966949 37967242 -102349523 - AluJb SINE Alu 0 312 1 446 148 37 0 chr10 37968497 37968578 -102348187 + LTR42 LTR ERVL 5 88 -407 388 343 77 21 chr10 37969831 37970117 -102346648 + LTR57-int LTR ERVL 1856 2157 -3186 304 275 141 21 chr10 37970940 37971082 -102345683 - MIR SINE MIR -71 191 33 875 261 77 19 chr10 37972020 37972345 -102344420 + L1ME4a LINE L1 5491 5834 -287 255 129 100 57 chr10 37972459 37972529 -102344236 + L1ME4a LINE L1 6048 6120 -1 461 262 163 0 chr10 37974627 37974799 -102341966 - MIR SINE MIR -14 248 49 2135 81 0 75 chr10 37975599 37975907 -102340858 + AluSc SINE Alu 1 285 -24 25 31 0 0 chr10 37976593 37976625 -102340140 + AT_rich Low_complexity Low_complexity 1 32 0 2229 101 0 29 chr10 37976758 37977064 -102339701 + AluSx SINE Alu 1 297 -15 1910 156 10 0 chr10 37977967 37978256 -102338509 + AluJb SINE Alu 1 292 -20 421 325 77 42 chr10 37980493 37981054 -102335711 + L2 LINE L2 2723 3304 -9 2112 108 14 14 chr10 37981202 37981499 -102335266 - AluSx SINE Alu -15 297 1 1724 176 68 8 chr10 37981754 37982124 -102334641 - L1MB8 LINE L1 0 6178 5787 204 40 0 0 chr10 37982128 37982153 -102334612 + (CA)n Simple_repeat Simple_repeat 2 26 0 312 27 0 0 chr10 37982153 37982177 -102334588 + (TG)n Simple_repeat Simple_repeat 1 61 0 312 27 0 0 chr10 37982177 37982214 -102334551 + (TG)n Simple_repeat Simple_repeat 2 38 0 3192 115 2 0 chr10 37982240 37982666 -102334099 - LTR3 LTR ERVK -1 431 5 387 105 0 0 chr10 37982680 37982737 -102334028 + (TATATG)n Simple_repeat Simple_repeat 4 60 0 1798 183 24 12 chr10 37982753 37983092 -102333673 - MER2 DNA MER2_type -2 343 1 8222 204 71 29 chr10 37983097 37983210 -102333555 - L1MB8 LINE L1 -406 5778 5671 2310 145 8 0 chr10 37983210 37983562 -102333203 + THE1A LTR MaLR 1 355 0 11266 94 34 1 chr10 37983562 37985091 -102331674 + THE1A-int LTR MaLR 1 1580 0 2179 128 11 40 chr10 37985091 37985466 -102331299 + THE1B LTR MaLR 1 364 0 8222 204 71 29 chr10 37985466 37986684 -102330081 - L1MB8 LINE L1 -513 5671 4506 2378 97 0 0 chr10 37986684 37986983 -102329782 + AluSc SINE Alu 1 299 -10 8222 204 71 29 chr10 37986983 37988396 -102328369 - L1MB8 LINE L1 -1678 4506 2917 804 152 41 174 chr10 37988387 37988588 -102328177 - L1MC3 LINE L1 0 7785 7640 * 1399 197 14 21 chr10 37988588 37988877 -102327888 - AluJo SINE Alu -25 287 1 804 152 41 174 chr10 37988877 37988991 -102327774 - L1MC3 LINE L1 -145 7640 7512 318 191 0 0 chr10 37988991 37989055 -102327710 - L1MD3 LINE L1 -210 7777 7512 283 281 0 0 chr10 37989055 37989119 -102327646 - L1MC3 LINE L1 -210 7575 7512 * 318 246 0 0 chr10 37989118 37989183 -102327582 - L1MC3 LINE L1 -209 7576 7512 288 218 0 0 chr10 37989192 37989247 -102327518 - L1MD3 LINE L1 -218 7777 7723 * 2546 184 25 4 chr10 37989225 37989708 -102327057 - L1MC3 LINE L1 -181 7604 7112 234 217 0 117 chr10 37990228 37990348 -102326417 + MER112 DNA MER1_type 149 254 -6 2532 207 53 17 chr10 37990350 37990577 -102326188 - MER68 LTR ERV1 0 562 345 6373 149 66 9 chr10 37990577 37991738 -102325027 + Tigger3b DNA MER2_type 3 1230 -1 2532 207 53 17 chr10 37991738 37992052 -102324713 - MER68 LTR ERV1 -217 345 1 236 327 196 6 chr10 37992242 37992410 -102324355 - Charlie8 DNA MER1_type -2209 208 9 1435 196 22 90 chr10 37992452 37992865 -102323900 - MLT1B LTR MaLR -2 388 4 191 245 0 0 chr10 37992913 37992962 -102323803 - L2 LINE L2 -671 2643 2595 24 53 0 0 chr10 37992964 37993002 -102323763 + AT_rich Low_complexity Low_complexity 1 38 0 25 65 0 0 chr10 37993072 37993118 -102323647 + AT_rich Low_complexity Low_complexity 1 46 0 2447 142 54 14 chr10 37995204 37995433 -102321332 - Tigger2 DNA MER2_type 0 2718 2500 363 89 0 0 chr10 37995433 37995489 -102321276 + (TA)n Simple_repeat Simple_repeat 2 57 0 2030 102 3 0 chr10 37995489 37995773 -102320992 - AluSg SINE Alu -25 285 1 2447 142 54 14 chr10 37995773 37995971 -102320794 - Tigger2 DNA MER2_type -217 2501 2273 401 180 0 0 chr10 37995968 37996029 -102320736 + MER8 DNA MER2_type 179 239 0 * 218 292 22 11 chr10 37997624 37997713 -102319052 + CT-rich Low_complexity Low_complexity 4 93 0 194 353 172 24 chr10 37997957 37998294 -102318471 + L2 LINE L2 2077 2463 -851 3912 127 41 73 chr10 37998982 37999767 -102316998 + L1MB3 LINE L1 5423 6182 -1 326 111 0 0 chr10 37999778 37999832 -102316933 + L1MD2 LINE L1 6305 6358 -1 366 246 98 8 chr10 38002253 38002375 -102314390 - MIR SINE MIR -60 202 70 452 189 110 0 chr10 38002702 38002829 -102313936 - MIR SINE MIR -50 212 72 181 294 59 35 chr10 38003622 38003707 -102313058 + L2 LINE L2 73 159 -3155 1117 251 169 20 chr10 38003958 38004024 -102312741 - Charlie2 DNA MER1_type -4 2858 2803 1829 98 4 4 chr10 38004024 38004280 -102312485 - AluSq SINE Alu -14 299 44 1117 251 169 20 chr10 38004280 38004652 -102312113 - Charlie2 DNA MER1_type -59 2803 2488 2029 112 3 10 chr10 38004652 38004947 -102311818 + AluSx SINE Alu 1 293 -19 1117 251 169 20 chr10 38004947 38005342 -102311423 - Charlie2 DNA MER1_type -374 2488 1857 728 314 48 9 chr10 38005334 38005649 -102311116 - Charlie2 DNA MER1_type -2532 330 4 * 2371 111 26 31 chr10 38005687 38006075 -102310690 + MLT1B LTR MaLR 5 390 0 4344 200 65 70 chr10 38006075 38007450 -102309315 + MLT1B-int LTR MaLR 1 1369 -2 1574 199 75 11 chr10 38007457 38007818 -102308947 + MLT1B LTR MaLR 7 390 0 304 266 217 28 chr10 38008519 38008662 -102308103 - L1ME4a LINE L1 -90 6031 5862 2489 213 17 2 chr10 38009470 38009996 -102306769 - L1MB3 LINE L1 -1 6182 5649 1125 112 0 12 chr10 38010884 38011053 -102305712 - AluSq SINE Alu -13 300 134 2135 112 0 10 chr10 38011053 38011357 -102305408 - AluSq SINE Alu -12 301 1 739 206 32 37 chr10 38012437 38012626 -102304139 + MER5A DNA MER1_type 2 189 0 2009 119 10 3 chr10 38013527 38013820 -102302945 - AluSx SINE Alu -17 295 1 1933 109 3 36 chr10 38013878 38014181 -102302584 - AluSg SINE Alu -9 301 9 2108 114 10 0 chr10 38019458 38019757 -102297008 - AluSq SINE Alu -11 302 1 21 36 0 0 chr10 38019806 38019834 -102296931 + AT_rich Low_complexity Low_complexity 1 28 0 35 0 0 0 chr10 38020247 38020282 -102296483 + AT_rich Low_complexity Low_complexity 1 35 0 1170 181 27 50 chr10 38020282 38020433 -102296332 - AluJo SINE Alu -26 286 142 2042 124 0 3 chr10 38020433 38020732 -102296033 - AluSx SINE Alu -14 298 1 1170 181 27 50 chr10 38020732 38020840 -102295925 - AluJo SINE Alu -170 142 33 413 236 45 36 chr10 38021519 38021629 -102295136 + MIR SINE MIR 39 149 -59 402 277 88 20 chr10 38023453 38023601 -102293164 + L1M4 LINE L1 4243 4400 -1746 911 151 0 7 chr10 38023617 38023763 -102293002 + FRAM SINE Alu 14 158 -18 638 241 156 31 chr10 38023804 38023989 -102292776 - MIR SINE MIR -10 252 33 782 164 25 0 chr10 38023989 38024111 -102292654 - FLAM_C SINE Alu -8 125 1 638 241 156 31 chr10 38024111 38024149 -102292616 - MIR SINE MIR -229 33 1 1695 210 112 9 chr10 38024198 38024617 -102292148 + MLT1C LTR MaLR 6 467 0 2069 113 3 3 chr10 38024645 38024937 -102291828 + AluSx SINE Alu 1 292 -20 215 308 56 47 chr10 38025064 38025171 -102291594 + L2 LINE L2 2896 3003 -310 272 194 65 97 chr10 38025798 38025891 -102290874 - MIR SINE MIR -88 174 85 195 265 48 12 chr10 38025961 38026044 -102290721 + L2 LINE L2 3183 3268 -45 1731 172 64 23 chr10 38026313 38026959 -102289806 + L1MA7 LINE L1 5502 6291 0 267 247 99 62 chr10 38027237 38027399 -102289366 - MIR SINE MIR -10 252 85 1520 98 0 0 chr10 38028441 38028655 -102288110 + AluSg/x SINE Alu 93 306 -6 410 255 90 35 chr10 38028712 38028857 -102287908 + L3 LINE CR1 1259 1411 -166 336 302 151 35 chr10 38029092 38029264 -102287501 - MIR SINE MIR -65 197 6 2467 77 0 0 chr10 38029317 38029628 -102287137 + AluY SINE Alu 1 311 0 1657 121 28 0 chr10 38029758 38030007 -102286758 + AluSx SINE Alu 49 304 -8 1467 153 50 37 chr10 38030299 38030599 -102286166 - AluJo SINE Alu -8 304 1 237 342 50 25 chr10 38032382 38032543 -102284222 + L2 LINE L2 2644 2808 -506 183 184 0 0 chr10 38033629 38033667 -102283098 + CT-rich Low_complexity Low_complexity 2 39 0 333 0 0 0 chr10 38033910 38033947 -102282818 + (TG)n Simple_repeat Simple_repeat 1 37 0 1668 184 26 49 chr10 38034039 38034430 -102282335 - MLT1B LTR MaLR -8 382 1 554 39 13 0 chr10 38034524 38034601 -102282164 + (TC)n Simple_repeat Simple_repeat 1 78 0 2252 99 0 6 chr10 38034644 38034958 -102281807 - AluSx SINE Alu 0 312 1 1688 130 4 19 chr10 38035353 38035622 -102281143 - AluJo SINE Alu -16 296 32 1854 154 3 25 chr10 38036373 38036692 -102280073 - AluJb SINE Alu 0 312 1 1817 150 0 0 chr10 38037107 38037387 -102279378 + AluJo SINE Alu 1 280 -32 324 0 0 0 chr10 38037389 38037425 -102279340 + (TAA)n Simple_repeat Simple_repeat 2 37 0 245 259 0 54 chr10 38037722 38037739 -102279026 + T-rich Low_complexity Low_complexity 5 21 -89 2253 152 8 19 chr10 38037739 38038108 -102278657 - MLT1A1 LTR MaLR 0 365 1 245 259 0 54 chr10 38038108 38038202 -102278563 + T-rich Low_complexity Low_complexity 21 110 0 1685 311 64 24 chr10 38038426 38039346 -102277419 + L1MEc LINE L1 35 991 -5405 710 217 19 0 chr10 38039347 38039508 -102277257 + L1MEc LINE L1 2394 2557 -3658 354 341 24 0 chr10 38040562 38040685 -102276080 + MIR SINE MIR 13 138 -124 201 256 183 24 chr10 38041145 38041227 -102275538 + L2 LINE L2 3169 3263 -9 1504 139 20 51 chr10 38041846 38042141 -102274624 + AluJo SINE Alu 1 286 -26 183 42 0 0 chr10 38042141 38042165 -102274600 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 1073 108 0 29 chr10 38042498 38042768 -102273997 + (TTCC)n Simple_repeat Simple_repeat 4 438 0 2244 100 0 0 chr10 38043169 38043468 -102273297 - AluSx SINE Alu -13 299 1 1505 132 8 0 chr10 38043523 38043758 -102273007 + L1MA6 LINE L1 6059 6295 -5 2444 70 0 0 chr10 38044369 38044671 -102272094 + AluSc SINE Alu 1 302 -7 340 281 10 10 chr10 38044718 38044814 -102271951 - MIR SINE MIR -43 219 124 207 293 225 0 chr10 38045115 38045306 -102271459 - L2 LINE L2 -357 2957 2724 673 164 0 0 chr10 38045395 38045499 -102271266 + AluJb SINE Alu 2 105 -207 248 154 0 0 chr10 38045499 38045538 -102271227 + MADE1 DNA Mariner 42 80 0 617 259 186 22 chr10 38046008 38046282 -102270483 + L2 LINE L2 2982 3300 -13 2132 139 0 16 chr10 38046546 38046862 -102269903 - AluSx SINE Alu -1 311 1 324 0 0 0 chr10 38048036 38048072 -102268693 + (CA)n Simple_repeat Simple_repeat 2 37 0 396 351 146 0 chr10 38048246 38048451 -102268314 - MIR SINE MIR -12 250 16 2215 231 36 91 chr10 38048751 38049065 -102267700 - MER82 DNA MER2_type 0 653 396 1818 143 0 21 chr10 38049065 38049352 -102267413 + AluJo SINE Alu 12 292 -20 2215 231 36 91 chr10 38049352 38049728 -102267037 - MER82 DNA MER2_type -257 396 1 379 287 133 11 chr10 38049732 38049920 -102266845 - MIR SINE MIR -9 253 43 1621 181 17 10 chr10 38049950 38050242 -102266523 - AluJo SINE Alu -14 298 5 2289 100 0 10 chr10 38050499 38050799 -102265966 - AluSx SINE Alu -15 297 1 257 329 0 26 chr10 38051108 38051184 -102265581 - MIR SINE MIR -113 149 76 183 326 166 21 chr10 38051883 38052070 -102264695 - MIR SINE MIR -15 247 34 2435 87 0 0 chr10 38053222 38053522 -102263243 - AluY SINE Alu -11 300 1 719 194 0 8 chr10 38054484 38054635 -102262130 + FLAM_A SINE Alu 3 133 0 1892 125 7 49 chr10 38055831 38056136 -102260629 + AluJo SINE Alu 14 305 -7 2443 93 30 35 chr10 38056643 38056711 -102260054 - THE1B LTR MaLR 0 364 297 2423 87 0 0 chr10 38056711 38057009 -102259756 - AluY SINE Alu -12 299 2 2443 93 30 35 chr10 38057009 38057306 -102259459 - THE1B LTR MaLR -67 297 1 2228 127 3 0 chr10 38058392 38058692 -102258073 + AluSx SINE Alu 1 301 -11 367 264 151 6 chr10 38058913 38059072 -102257693 - MLT1J2 LTR MaLR -6 444 263 372 245 168 7 chr10 38059117 38059260 -102257505 - MLT1J1 LTR MaLR -277 169 4 1408 174 155 0 chr10 38060544 38060638 -102256127 + AluJo SINE Alu 2 80 -222 215 56 56 0 chr10 38060638 38060674 -102256091 + A-rich Low_complexity Low_complexity 4 41 0 1408 174 155 0 chr10 38060674 38060837 -102255928 + AluJo SINE Alu 80 299 -3 246 315 7 56 chr10 38060921 38061064 -102255701 + MIR SINE MIR 106 241 -21 1996 126 20 7 chr10 38061959 38062252 -102254513 + AluSx SINE Alu 1 297 -15 1822 149 0 51 chr10 38062566 38062882 -102253883 + AluJo SINE Alu 1 300 -12 1520 140 93 36 chr10 38062897 38063175 -102253590 + AluJo SINE Alu 1 294 -18 226 358 41 41 chr10 38063887 38064010 -102252755 - MIR SINE MIR -118 144 22 1834 137 48 34 chr10 38064135 38064428 -102252337 - AluJo SINE Alu -15 297 1 1673 167 13 39 chr10 38064919 38065225 -102251540 - AluJo SINE Alu -14 298 1 787 211 0 0 chr10 38065347 38065480 -102251285 + FLAM_A SINE Alu 1 133 0 2407 63 0 30 chr10 38065491 38065825 -102250940 + AluY SINE Alu 1 311 0 832 94 8 0 chr10 38066449 38066566 -102250199 - MSTB1 LTR MaLR 0 432 315 2467 110 31 3 chr10 38066567 38066921 -102249844 + THE1B LTR MaLR 1 364 0 1938 139 3 63 chr10 38066982 38067314 -102249451 - AluJo SINE Alu 0 312 1 263 328 39 0 chr10 38067317 38067445 -102249320 - L2 LINE L2 -957 2357 2225 2208 130 0 9 chr10 38067751 38068066 -102248699 - AluSx SINE Alu 0 312 1 1070 122 0 19 chr10 38068512 38068711 -102248054 - AluSg/x SINE Alu 0 323 128 399 270 40 52 chr10 38069083 38069257 -102247508 - MIR SINE MIR -8 254 83 1702 194 3 28 chr10 38069324 38069643 -102247122 - AluJb SINE Alu -1 311 1 344 286 298 17 chr10 38070046 38070224 -102246541 - MIR SINE MIR -14 248 21 2272 109 10 6 chr10 38070225 38070536 -102246229 + AluSx SINE Alu 1 312 0 2459 165 52 0 chr10 38070885 38071290 -102245475 - MSTB LTR MaLR 0 426 1 2314 117 7 0 chr10 38071446 38071754 -102245011 + AluSq SINE Alu 1 310 -3 5412 146 5 0 chr10 38072463 38073346 -102243419 - L1PA15 LINE L1 0 6165 5279 2092 112 54 17 chr10 38073363 38073657 -102243108 - AluSx SINE Alu -7 305 1 2045 141 0 10 chr10 38074742 38075041 -102241724 - AluJo SINE Alu -16 296 1 196 245 0 19 chr10 38075242 38075295 -102241470 + L2 LINE L2 3262 3313 0 1529 179 29 58 chr10 38075449 38075757 -102241008 - AluJb SINE Alu -13 299 1 216 298 0 64 chr10 38075800 38075894 -102240871 - MIR SINE MIR -71 191 104 665 294 40 78 chr10 38076046 38076471 -102240294 + MLT1I LTR MaLR 1 409 0 216 184 0 0 chr10 38076499 38076548 -102240217 + (TGGA)n Simple_repeat Simple_repeat 4 52 0 3575 126 20 32 chr10 38076562 38077127 -102239638 + L1MB2 LINE L1 5574 6133 -38 2399 73 21 0 chr10 38077127 38077413 -102239352 - AluSq SINE Alu -21 292 1 3575 126 20 32 chr10 38077413 38077449 -102239316 + L1MB2 LINE L1 6133 6168 -3 2061 139 3 13 chr10 38077511 38077812 -102238953 - AluSx SINE Alu -14 298 1 774 205 110 50 chr10 38077814 38078067 -102238698 - MIR SINE MIR -1 261 13 189 0 0 0 chr10 38078716 38078737 -102238028 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 2784 158 6 6 chr10 38078737 38079217 -102237548 - L1PA16 LINE L1 -23 6143 5664 304 268 0 0 chr10 38079513 38079610 -102237155 + (TA)n Simple_repeat Simple_repeat 1 97 0 615 260 5 78 chr10 38079646 38079838 -102236927 - MER5B DNA MER1_type 0 178 1 1521 174 66 41 chr10 38080430 38080793 -102235972 - THE1C LTR MaLR -3 372 1 1734 183 35 0 chr10 38081071 38081360 -102235405 - AluJo SINE Alu -13 299 1 242 255 98 20 chr10 38081452 38081554 -102235211 + MIR3 SINE MIR 50 159 -49 2139 114 10 0 chr10 38081828 38082118 -102234647 - AluSx SINE Alu -19 293 1 23 54 0 0 chr10 38085917 38085954 -102230811 + AT_rich Low_complexity Low_complexity 1 37 0 317 167 9 46 chr10 38086618 38086726 -102230039 + C-rich Low_complexity Low_complexity 6 109 0 195 14 100 43 chr10 38087484 38087554 -102229211 + (CCGCG)n Simple_repeat Simple_repeat 4 77 0 23 0 0 0 chr10 38087558 38087581 -102229184 + GC_rich Low_complexity Low_complexity 1 23 0 238 157 14 14 chr10 38087960 38088030 -102228735 + (CCG)n Simple_repeat Simple_repeat 3 72 0 39 88 0 0 chr10 38088033 38088135 -102228630 + GC_rich Low_complexity Low_complexity 1 102 0 21 0 0 0 chr10 38088989 38089010 -102227755 + GC_rich Low_complexity Low_complexity 1 21 0 261 311 22 0 chr10 38090155 38090245 -102226520 + MIR SINE MIR 117 208 -54 27 49 0 0 chr10 38090584 38090625 -102226140 + GC_rich Low_complexity Low_complexity 1 41 0 337 247 17 17 chr10 38090810 38090984 -102225781 + CT-rich Low_complexity Low_complexity 2 175 0 1955 170 0 0 chr10 38092817 38093111 -102223654 + AluJo SINE Alu 1 294 -18 721 171 23 16 chr10 38093183 38093312 -102223453 + AluJo SINE Alu 1 130 -172 1076 157 15 46 chr10 38093335 38093359 -102223406 + AluJo SINE Alu 118 141 -171 2034 147 0 10 chr10 38093359 38093659 -102223106 + AluSx SINE Alu 1 297 -15 1076 157 15 46 chr10 38093659 38093831 -102222934 + AluJo SINE Alu 141 308 -4 260 176 20 0 chr10 38094670 38094721 -102222044 - MLT1J LTR MaLR -350 161 110 238 196 20 0 chr10 38094682 38094733 -102222032 - LTR67 LTR ERVL -404 153 102 * 2073 110 0 36 chr10 38095110 38095419 -102221346 + AluSx SINE Alu 1 298 -14 2175 129 0 10 chr10 38095512 38095822 -102220943 - AluSx SINE Alu -5 307 1 21 0 0 0 chr10 38095845 38095866 -102220899 + AT_rich Low_complexity Low_complexity 1 21 0 209 293 12 73 chr10 38096481 38096507 -102220258 - L2 LINE L2 -10 3262 3236 1165 246 93 60 chr10 38096507 38097044 -102219721 - MLT1H1 LTR MaLR 0 555 1 209 293 12 73 chr10 38097044 38097099 -102219666 - L2 LINE L2 -36 3236 3186 585 288 138 22 chr10 38097502 38097822 -102218943 - MLT1L LTR MaLR -68 547 191 361 200 12 12 chr10 38097847 38097927 -102218838 - MLT1L LTR MaLR -535 80 1 2122 121 3 0 chr10 38098910 38099200 -102217565 - AluSx SINE Alu -21 291 1 759 100 0 0 chr10 38099384 38099494 -102217271 + (TTCC)n Simple_repeat Simple_repeat 3 112 0 1638 149 7 64 chr10 38099510 38099805 -102216960 - AluJo SINE Alu -34 278 1 188 65 0 32 chr10 38100462 38100493 -102216272 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 553 281 65 35 chr10 38100502 38100733 -102216032 - MLT1L LTR MaLR -9 606 369 531 241 60 98 chr10 38100746 38100966 -102215799 - MLT1L LTR MaLR -360 255 45 1685 195 0 7 chr10 38100966 38101294 -102215471 + AluJo SINE Alu 1 312 0 531 241 60 98 chr10 38101294 38101338 -102215427 - MLT1L LTR MaLR -570 45 1 2334 98 3 0 chr10 38101426 38101732 -102215033 - AluSp SINE Alu -6 307 1 289 268 10 22 chr10 38101959 38102100 -102214665 - L1ME LINE L1 -355 5878 5736 319 61 0 20 chr10 38102116 38102160 -102214605 - AluSx SINE Alu 0 300 257 1600 98 0 5 chr10 38102160 38102363 -102214402 - AluSx SINE Alu -110 202 1 341 303 93 35 chr10 38102412 38102721 -102214044 - L1ME LINE L1 -570 5620 5331 2074 127 7 10 chr10 38102721 38103050 -102213715 + AluSx SINE Alu 1 312 0 341 303 93 35 chr10 38103050 38103612 -102213153 - L1ME LINE L1 -859 5331 4698 342 224 26 35 chr10 38103644 38103760 -102213005 - L1ME LINE L1 -2847 3368 3254 308 282 136 35 chr10 38103763 38104299 -102212466 - L1ME LINE L1 -3222 2993 2338 877 200 0 6 chr10 38104300 38104465 -102212300 - FRAM SINE Alu 0 40 1 2215 234 100 23 chr10 38104555 38105277 -102211488 - HsTC2 DNA Tc2 -2 1896 4 305 226 6 0 chr10 38105773 38105846 -102210919 - L1ME LINE L1 -862 1714 1598 233 292 123 0 chr10 38106105 38106235 -102210530 - L1ME LINE L1 -5941 264 119 2293 110 0 0 chr10 38106332 38106632 -102210133 - AluSx SINE Alu -12 300 1 262 242 32 0 chr10 38107108 38107170 -102209595 + L1ME LINE L1 5504 5567 -599 669 268 129 44 chr10 38107185 38107457 -102209308 - MLT1H LTR MaLR -3 546 252 236 30 30 0 chr10 38107481 38107514 -102209251 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1608 145 86 143 chr10 38107638 38108092 -102208673 + MSTA LTR MaLR 1 428 0 1803 146 0 31 chr10 38109399 38109752 -102207013 + AluJb SINE Alu 1 344 0 243 0 0 0 chr10 38109892 38109919 -102206846 + (CA)n Simple_repeat Simple_repeat 1 27 0 645 144 0 0 chr10 38112522 38112612 -102204153 - AluJb SINE Alu -20 292 203 27 112 0 0 chr10 38112668 38112793 -102203972 + AT_rich Low_complexity Low_complexity 1 125 0 733 251 76 63 chr10 38112815 38113197 -102203568 - L1ME4a LINE L1 -84 6037 5651 245 325 61 0 chr10 38113519 38113633 -102203132 + MIR SINE MIR 72 192 -70 211 292 7 56 chr10 38113947 38114091 -102202674 + L2 LINE L2 2919 3055 -258 537 220 15 15 chr10 38114138 38114270 -102202495 + MIR SINE MIR 120 251 -11 1137 123 0 0 chr10 38114315 38114392 -102202373 + (CCA)n Simple_repeat Simple_repeat 1 256 0 1137 123 0 0 chr10 38114392 38114571 -102202194 + (CCA)n Simple_repeat Simple_repeat 1 179 0 980 159 9 8 chr10 38114599 38114953 -102201812 + (CCA)n Simple_repeat Simple_repeat 1 354 0 228 261 0 0 chr10 38114986 38115032 -102201733 + L2 LINE L2 3261 3306 -7 372 357 50 76 chr10 38115210 38115669 -102201096 + L2 LINE L2 2824 3270 -2 213 301 0 0 chr10 38116092 38116185 -102200580 + (TG)n Simple_repeat Simple_repeat 1 93 0 506 268 0 6 chr10 38116196 38116375 -102200390 + (TG)n Simple_repeat Simple_repeat 2 179 0 439 279 33 33 chr10 38116537 38116720 -102200045 + LTR16C LTR ERVL 303 485 -6 737 125 45 27 chr10 38117162 38117274 -102199491 - FLAM_A SINE Alu -18 124 11 271 250 96 115 chr10 38117366 38117722 -102199043 - L2 LINE L2 -38 3234 2886 1855 151 0 39 chr10 38118368 38118559 -102198206 - AluJo SINE Alu -13 299 123 1898 113 0 0 chr10 38118559 38118807 -102197958 + AluSc SINE Alu 41 288 -21 1855 151 0 39 chr10 38118807 38118926 -102197839 - AluJo SINE Alu -189 123 1 2262 103 3 3 chr10 38119616 38119918 -102196847 + AluSq SINE Alu 1 302 -11 1603 189 21 3 chr10 38120190 38120476 -102196289 + AluJo SINE Alu 1 291 -21 281 275 124 67 chr10 38120742 38120935 -102195830 + MIR SINE MIR 33 236 -26 5383 197 49 21 chr10 38121482 38122568 -102194197 - L1MCa LINE L1 -4970 1456 331 1509 173 39 33 chr10 38122568 38122874 -102193891 - AluJo SINE Alu -4 308 1 5383 197 49 21 chr10 38122874 38123012 -102193753 - L1MCa LINE L1 -6095 331 198 2134 129 0 10 chr10 38123163 38123473 -102193292 - AluSx SINE Alu -5 307 1 21 0 0 0 chr10 38123496 38123517 -102193248 + AT_rich Low_complexity Low_complexity 1 21 0 209 293 12 73 chr10 38124132 38124158 -102192607 - L2 LINE L2 -10 3262 3236 1152 238 99 65 chr10 38124158 38124695 -102192070 - MLT1H1 LTR MaLR 0 555 1 209 293 12 73 chr10 38124695 38124750 -102192015 - L2 LINE L2 -36 3236 3186 585 288 138 22 chr10 38125153 38125473 -102191292 - MLT1L LTR MaLR -68 547 191 361 200 12 12 chr10 38125498 38125578 -102191187 - MLT1L LTR MaLR -535 80 1 2122 121 3 0 chr10 38126557 38126847 -102189918 - AluSx SINE Alu -21 291 1 831 93 0 0 chr10 38127031 38127149 -102189616 + (TTCC)n Simple_repeat Simple_repeat 3 120 0 1638 149 7 64 chr10 38127165 38127460 -102189305 - AluJo SINE Alu -34 278 1 188 65 0 32 chr10 38128117 38128148 -102188617 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 553 281 65 35 chr10 38128157 38128388 -102188377 - MLT1L LTR MaLR -9 606 369 563 245 53 91 chr10 38128401 38128621 -102188144 - MLT1L LTR MaLR -360 255 45 1712 192 0 7 chr10 38128621 38128949 -102187816 + AluJo SINE Alu 1 312 0 563 245 53 91 chr10 38128949 38128993 -102187772 - MLT1L LTR MaLR -570 45 1 2334 98 3 0 chr10 38129081 38129387 -102187378 - AluSp SINE Alu -6 307 1 289 268 10 22 chr10 38129614 38129755 -102187010 - L1ME LINE L1 -355 5809 5667 308 82 0 20 chr10 38129771 38129815 -102186950 - AluSx SINE Alu 0 300 257 1600 98 0 5 chr10 38129815 38130018 -102186747 - AluSx SINE Alu -110 202 1 260 320 95 31 chr10 38130067 38130289 -102186476 - L1ME LINE L1 -570 5551 5316 2237 99 3 3 chr10 38130375 38130677 -102186088 + AluSq SINE Alu 1 302 -11 1579 192 21 3 chr10 38130949 38131235 -102185530 + AluJo SINE Alu 1 291 -21 281 275 124 67 chr10 38131501 38131694 -102185071 + MIR SINE MIR 33 236 -26 6099 201 46 19 chr10 38132241 38133327 -102183438 - L1MCa LINE L1 -4970 1456 322 1509 173 39 33 chr10 38133327 38133633 -102183132 - AluJo SINE Alu -4 308 1 6099 201 46 19 chr10 38133633 38133946 -102182819 - L1MCa LINE L1 -6104 322 19 2406 91 0 0 chr10 38134674 38134970 -102181795 + AluSx SINE Alu 1 296 -16 476 272 86 39 chr10 38135280 38135537 -102181228 - L1ME LINE L1 -312 5809 5541 22 94 0 0 chr10 38135598 38135662 -102181103 + AT_rich Low_complexity Low_complexity 1 64 0 9817 25 0 0 chr10 38135844 38136975 -102179790 - L1PA3 LINE L1 -920 5226 4096 7982 29 4 14 chr10 38136975 38137247 -102179518 + L1PA3 LINE L1 5214 5487 -668 2827 16 0 0 chr10 38137247 38137555 -102179210 + AluYb8 SINE Alu 1 308 -10 7982 29 4 14 chr10 38137555 38138232 -102178533 + L1PA3 LINE L1 5487 6154 -1 1598 209 51 0 chr10 38138618 38138934 -102177831 - MER2 DNA MER2_type 0 345 14 2647 139 65 5 chr10 38140628 38141045 -102175720 - L1PA16 LINE L1 -1 6165 5724 265 235 61 31 chr10 38141144 38141242 -102175523 + L1MC4 LINE L1 6615 6715 -1327 381 300 0 13 chr10 38141531 38141681 -102175084 + CT-rich Low_complexity Low_complexity 2 149 0 21 57 0 0 chr10 38142427 38142462 -102174303 + AT_rich Low_complexity Low_complexity 1 35 0 2033 129 0 0 chr10 38143960 38144279 -102172486 - AluSx SINE Alu 0 331 13 339 318 53 8 chr10 38144390 38144522 -102172243 + MIR3 SINE MIR 64 201 -7 1638 189 13 10 chr10 38145002 38145309 -102171456 + AluJb SINE Alu 1 308 -4 438 247 41 53 chr10 38145835 38146005 -102170760 - Charlie8 DNA MER1_type -2152 265 98 1618 175 0 18 chr10 38146005 38146316 -102170449 - AluJo SINE Alu 0 314 9 188 222 167 0 chr10 38146577 38146631 -102170134 - MIR SINE MIR -140 122 60 2175 115 3 13 chr10 38146786 38146921 -102169844 + AluSx SINE Alu 1 136 -176 2215 123 0 0 chr10 38146921 38147231 -102169534 + AluSq SINE Alu 1 310 -3 2175 115 3 13 chr10 38147231 38147409 -102169356 + AluSx SINE Alu 136 311 -1 235 263 35 0 chr10 38147853 38147910 -102168855 + MIR SINE MIR 194 252 -10 1889 158 0 7 chr10 38150670 38150961 -102165804 + AluJb SINE Alu 1 289 -23 1928 151 0 0 chr10 38151559 38151909 -102164856 + AluSx SINE Alu 5 354 0 346 356 52 0 chr10 38152868 38153003 -102163762 + MIR3 SINE MIR 1 142 -66 187 289 0 0 chr10 38153009 38153054 -102163711 - L2 LINE L2 0 3313 3269 2509 75 0 0 chr10 38153185 38153490 -102163275 - AluY SINE Alu -6 305 1 2134 130 3 0 chr10 38153577 38153877 -102162888 - AluSx SINE Alu -11 301 1 198 71 0 0 chr10 38154705 38154733 -102162032 + (TG)n Simple_repeat Simple_repeat 1 28 0 2061 120 0 0 chr10 38156036 38156312 -102160453 - AluSx SINE Alu -12 300 25 2027 120 7 0 chr10 38156641 38156932 -102159833 - AluSx SINE Alu -19 293 1 4617 107 6 3 chr10 38158285 38158922 -102157843 + LTR9B LTR ERV1 6 644 0 267 228 121 53 chr10 38159352 38159502 -102157263 - MIR SINE MIR -71 191 24 481 370 15 0 chr10 38159671 38159874 -102156891 - MIR SINE MIR -28 234 29 1811 161 50 56 chr10 38159965 38160141 -102156624 - L1PA16 LINE L1 -16 6150 5975 1762 168 35 0 chr10 38160141 38160426 -102156339 - AluJo SINE Alu -17 295 1 1811 161 50 56 chr10 38160426 38160609 -102156156 - L1PA16 LINE L1 -191 5975 5793 1452 150 19 0 chr10 38160906 38161166 -102155599 - L1MA4 LINE L1 0 6300 6036 379 283 9 6 chr10 38161953 38162306 -102154459 + (CA)n Simple_repeat Simple_repeat 1 354 0 497 201 13 13 chr10 38162980 38163139 -102153626 + (TG)n Simple_repeat Simple_repeat 2 160 0 520 276 45 0 chr10 38163693 38163849 -102152916 - MIR SINE MIR -19 243 81 3158 123 2 0 chr10 38164488 38164934 -102151831 - L1PA13 LINE L1 -2 6161 5715 423 309 66 51 chr10 38164940 38165542 -102151223 - L1MDa LINE L1 -842 1648 1012 1922 132 0 21 chr10 38166440 38166767 -102149998 + AluSx SINE Alu 1 321 0 186 359 145 19 chr10 38166858 38167120 -102149645 + L2 LINE L2 2084 2378 -936 1586 93 6 0 chr10 38167311 38167666 -102149099 - L1PB2 LINE L1 -2 6149 5717 729 169 121 61 chr10 38167667 38167898 -102148867 - ORSL DNA AcHobo -1 274 30 2395 111 44 39 chr10 38168044 38168406 -102148359 - THE1B LTR MaLR 0 364 1 293 246 0 0 chr10 38168422 38168483 -102148282 - Tigger5 DNA MER2_type 0 2323 2263 280 155 17 69 chr10 38168503 38168561 -102148204 - Tigger5 DNA MER2_type -2268 55 1 240 226 16 0 chr10 38170504 38170566 -102146199 + CT-rich Low_complexity Low_complexity 2 64 0 189 74 0 0 chr10 38170635 38170662 -102146103 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 1572 152 14 45 chr10 38170888 38171200 -102145565 - AluJb SINE Alu 0 312 11 1000 251 91 52 chr10 38172031 38172469 -102144296 + MLT1J LTR MaLR 1 455 -56 4167 186 35 8 chr10 38172582 38173666 -102143099 + L1MD2 LINE L1 4883 5992 -250 252 62 0 0 chr10 38173671 38173703 -102143062 - MLT2B1 LTR ERVL 0 520 489 351 78 0 0 chr10 38173706 38173757 -102143008 + (CA)n Simple_repeat Simple_repeat 2 52 0 362 166 11 57 chr10 38173782 38173932 -102142833 + GA-rich Low_complexity Low_complexity 2 144 -24 297 51 0 0 chr10 38173932 38173971 -102142794 + (CA)n Simple_repeat Simple_repeat 2 40 0 362 166 11 57 chr10 38173971 38173995 -102142770 + GA-rich Low_complexity Low_complexity 144 168 0 268 191 0 0 chr10 38174031 38174073 -102142692 - MLT2B1 LTR ERVL -118 402 361 2417 68 3 0 chr10 38174092 38174387 -102142378 + AluY SINE Alu 1 296 -15 1885 124 11 11 chr10 38174488 38174771 -102141994 - AluSx SINE Alu -29 283 1 1544 204 35 9 chr10 38174788 38175107 -102141658 - MLT2B1 LTR ERVL -193 327 1 261 50 100 0 chr10 38175123 38175163 -102141602 + L1MC/D LINE L1 5403 5446 -724 1224 222 29 52 chr10 38175174 38175453 -102141312 + L1MD2 LINE L1 6022 6293 -66 2204 121 3 3 chr10 38175453 38175760 -102141005 - AluSq SINE Alu -6 307 1 1224 222 29 52 chr10 38175760 38175823 -102140942 + L1MD2 LINE L1 6293 6356 -3 2471 99 11 62 chr10 38176181 38176555 -102140210 - THE1A LTR MaLR 0 355 1 926 269 118 26 chr10 38177225 38177642 -102139123 + L2 LINE L2 1776 2230 -1084 381 179 51 0 chr10 38177755 38177833 -102138932 - MER20 DNA MER1_type -3 216 135 317 197 28 22 chr10 38177873 38178051 -102138714 + (ATATG)n Simple_repeat Simple_repeat 2 180 0 243 0 0 0 chr10 38178105 38178132 -102138633 + (ATAGG)n Simple_repeat Simple_repeat 4 30 0 842 172 21 0 chr10 38178132 38178277 -102138488 - MER20 DNA MER1_type -71 148 1 468 77 0 0 chr10 38179781 38179846 -102136919 + (TTCC)n Simple_repeat Simple_repeat 1 65 0 2071 125 20 0 chr10 38179846 38180143 -102136622 - AluSx SINE Alu -9 303 1 857 236 16 0 chr10 38180181 38180372 -102136393 - L1PA16 LINE L1 -16 6150 5957 820 177 0 7 chr10 38180399 38180540 -102136225 - AluJb SINE Alu 0 312 173 324 329 40 27 chr10 38180881 38181030 -102135735 + MIR3 SINE MIR 48 198 -10 1915 156 0 13 chr10 38182354 38182656 -102134109 + AluJb SINE Alu 1 298 -14 2060 127 6 19 chr10 38182758 38183072 -102133693 + AluSx SINE Alu 1 310 -2 1868 174 0 7 chr10 38183320 38183624 -102133141 + AluJo SINE Alu 1 302 -10 408 308 55 16 chr10 38183651 38183833 -102132932 - MLT1J2 LTR MaLR -21 429 241 248 272 88 35 chr10 38183987 38184101 -102132664 + MLT1L LTR MaLR 225 344 -271 1118 149 64 0 chr10 38184101 38184289 -102132476 + MSTA LTR MaLR 211 410 -18 185 194 0 0 chr10 38185481 38185517 -102131248 - L2 LINE L2 0 3313 3278 2249 110 3 0 chr10 38185675 38185984 -102130781 + AluSx SINE Alu 1 310 -2 285 358 68 38 chr10 38185996 38186384 -102130381 - L2 LINE L2 -226 3046 2635 555 285 18 24 chr10 38186401 38186566 -102130199 + MER20 DNA MER1_type 56 219 0 233 356 144 17 chr10 38186902 38187020 -102129745 - MIR3 SINE MIR -46 162 30 22 0 0 0 chr10 38187114 38187136 -102129629 + AT_rich Low_complexity Low_complexity 1 22 0 274 75 75 0 chr10 38187156 38187223 -102129542 + (TA)n Simple_repeat Simple_repeat 1 72 0 21 71 0 0 chr10 38187311 38187353 -102129412 + AT_rich Low_complexity Low_complexity 1 42 0 264 159 68 6 chr10 38187364 38187527 -102129238 + (TA)n Simple_repeat Simple_repeat 1 173 0 31 0 0 0 chr10 38187527 38187558 -102129207 + AT_rich Low_complexity Low_complexity 1 31 0 2419 62 0 7 chr10 38187579 38187884 -102128881 + AluY SINE Alu 1 303 -8 2144 154 35 27 chr10 38187884 38188085 -102128680 - MLT1B LTR MaLR -9 381 174 772 204 80 12 chr10 38188085 38188247 -102128518 - FAM SINE Alu -2 173 1 2144 154 35 27 chr10 38188247 38188421 -102128344 - MLT1B LTR MaLR -216 174 3 25 31 0 0 chr10 38190510 38190542 -102126223 + AT_rich Low_complexity Low_complexity 1 32 0 1845 112 53 40 chr10 38190566 38190869 -102125896 - AluSx SINE Alu -5 307 1 337 239 34 48 chr10 38191028 38191237 -102125528 - L1M4c LINE L1 -2859 3523 3318 3863 219 50 18 chr10 38191270 38192839 -102123926 - L1MB7 LINE L1 -17 6665 5051 2091 244 85 30 chr10 38192836 38193704 -102123061 - L1MB7 LINE L1 -4835 1707 870 * 280 302 152 15 chr10 38194481 38194880 -102121885 - L1M4c LINE L1 -860 1883 1279 807 180 0 0 chr10 38194904 38195026 -102121739 - FLAM_C SINE Alu -20 123 2 898 193 33 52 chr10 38195059 38195271 -102121494 + MER20 DNA MER1_type 6 213 -6 2372 155 11 16 chr10 38195663 38196030 -102120735 - MLT1A1 LTR MaLR 0 365 1 1993 210 47 31 chr10 38196040 38196464 -102120301 - MLT1A1-int LTR MaLR -11 1724 1294 3027 238 145 26 chr10 38196489 38197525 -102119240 - MLT1A1-int LTR MaLR -576 1159 1 1866 194 26 12 chr10 38197527 38197873 -102118892 - MLT1A1 LTR MaLR -4 361 11 1861 163 3 26 chr10 38198478 38198791 -102117974 - AluJo SINE Alu -6 306 1 181 401 23 8 chr10 38199059 38199191 -102117574 + L2 LINE L2 3172 3305 -8 180 385 0 0 chr10 38199353 38199418 -102117347 - MIR3 SINE MIR 0 208 144 530 233 70 108 chr10 38199419 38199806 -102116959 - MLT1J LTR MaLR -2 509 138 297 358 37 31 chr10 38199964 38200126 -102116639 - L2 LINE L2 -609 2705 2543 204 129 16 97 chr10 38200273 38200335 -102116430 + T-rich Low_complexity Low_complexity 1 57 0 2183 116 0 0 chr10 38200962 38201351 -102115414 - AluSx SINE Alu 0 389 1 269 231 132 44 chr10 38202481 38202572 -102114193 - MIR3 SINE MIR -29 179 81 784 294 119 49 chr10 38202755 38203207 -102113558 + MLT1K LTR MaLR 97 580 -8 267 320 13 80 chr10 38203663 38203813 -102112952 + MIR SINE MIR 120 259 -3 1891 157 0 7 chr10 38204473 38204772 -102111993 + AluJb SINE Alu 1 297 -15 2137 93 28 7 chr10 38204773 38205064 -102111701 + AluSq SINE Alu 9 305 -8 1323 154 55 18 chr10 38206304 38206577 -102110188 + AluJo SINE Alu 4 286 -26 198 299 31 62 chr10 38206634 38206731 -102110034 - L2 LINE L2 -181 3091 2998 1494 155 81 15 chr10 38206767 38206871 -102109894 + AluJo SINE Alu 17 113 -199 189 0 0 0 chr10 38206871 38206892 -102109873 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1494 155 81 15 chr10 38206892 38207058 -102109707 + AluJo SINE Alu 113 305 -7 2274 105 3 0 chr10 38207871 38208166 -102108599 - AluSq SINE Alu -17 296 1 1639 187 13 16 chr10 38208808 38209113 -102107652 - AluJo SINE Alu -8 304 1 396 269 69 0 chr10 38209703 38209833 -102106932 + LTR33A LTR ERVL 362 500 -23 22 0 0 0 chr10 38210032 38210054 -102106711 + AT_rich Low_complexity Low_complexity 1 22 0 447 176 24 0 chr10 38210054 38210139 -102106626 - L1MA2 LINE L1 0 6304 6218 426 267 0 0 chr10 38210140 38210241 -102106524 + L1 LINE L1 2538 2638 -3508 1385 96 5 5 chr10 38210315 38210503 -102106262 - AluY SINE Alu -21 290 103 538 149 107 17 chr10 38211630 38211779 -102104986 + L1MA5 LINE L1 5980 6139 -161 3131 141 26 8 chr10 38211781 38212278 -102104487 - L1PA15 LINE L1 -5 6160 5655 838 183 0 0 chr10 38212278 38212440 -102104325 + L1MA5A LINE L1 6134 6297 0 1812 140 24 24 chr10 38214558 38214850 -102101915 - AluJo SINE Alu -15 297 6 297 217 72 0 chr10 38215094 38215163 -102101602 - L1ME3 LINE L1 0 6162 6089 189 0 0 0 chr10 38216569 38216590 -102100175 + (T)n Simple_repeat Simple_repeat 1 21 0 403 333 39 107 chr10 38216631 38217088 -102099677 + L2 LINE L2 2807 3232 -40 2200 112 0 3 chr10 38219998 38220294 -102096471 - AluSg SINE Alu -15 295 1 21 0 0 0 chr10 38220994 38221015 -102095750 + AT_rich Low_complexity Low_complexity 1 21 0 536 179 154 100 chr10 38221146 38221252 -102095513 - MER69 DNA AcHobo -7 2519 2420 647 239 31 6 chr10 38221252 38221411 -102095354 - FAM SINE Alu -12 163 1 536 179 154 100 chr10 38221411 38221544 -102095221 - MER69 DNA AcHobo -106 2420 2267 1273 279 107 0 chr10 38221556 38221986 -102094779 - MER69 DNA AcHobo -641 585 110 1937 174 14 0 chr10 38221992 38222337 -102094428 + L1PA16 LINE L1 5690 6039 -127 769 140 0 0 chr10 38222337 38222444 -102094321 + AluSp SINE Alu 1 107 -206 1133 145 28 0 chr10 38222579 38222814 -102093951 + AluSg/x SINE Alu 100 339 0 698 130 37 0 chr10 38222816 38222924 -102093841 + L1PA16 LINE L1 6046 6157 -9 416 202 0 21 chr10 38223897 38223991 -102092774 - AluS SINE Alu 0 312 221 469 319 96 15 chr10 38224134 38224542 -102092223 - L1ME LINE L1 -375 5795 5356 1753 118 12 87 chr10 38224941 38225263 -102091502 - AluSx SINE Alu -14 298 1 22 35 0 0 chr10 38226125 38226154 -102090611 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr10 38226470 38226492 -102090273 + AT_rich Low_complexity Low_complexity 1 22 0 1911 185 30 3 chr10 38227528 38227863 -102088902 - MER2 DNA MER2_type 0 344 1 591 283 15 87 chr10 38228157 38228312 -102088453 + MIR SINE MIR 12 142 -120 2674 141 28 23 chr10 38228312 38228744 -102088021 - Tigger2a DNA MER2_type 0 434 1 591 283 15 87 chr10 38228744 38228853 -102087912 + MIR SINE MIR 142 257 -5 228 67 0 0 chr10 38229397 38229427 -102087338 + (TG)n Simple_repeat Simple_repeat 2 31 0 5068 133 69 48 chr10 38230199 38230894 -102085871 - L1MC1 LINE L1 -9 6324 5604 2194 129 3 0 chr10 38230894 38231197 -102085568 - AluSx SINE Alu -8 304 1 5068 133 69 48 chr10 38231197 38231399 -102085366 - L1MC1 LINE L1 -729 5604 5408 416 288 279 18 chr10 38231595 38231928 -102084837 - L2 LINE L2 0 3272 2853 708 296 117 0 chr10 38232131 38232354 -102084411 + MIR SINE MIR 13 261 -1 1602 149 71 29 chr10 38232375 38232656 -102084109 - AluJo SINE Alu -19 293 1 369 325 76 6 chr10 38232732 38232889 -102083876 - MIR SINE MIR -73 189 22 14913 147 30 39 chr10 38233125 38235565 -102081200 - Tigger1 DNA MER2_type 0 2418 1 2101 134 0 0 chr10 38235624 38235914 -102080851 + AluSx SINE Alu 1 290 -22 1076 101 0 0 chr10 38237307 38237456 -102079309 - Tigger1 DNA MER2_type -1904 514 366 1545 218 59 35 chr10 38237471 38237752 -102079013 - MLT1C LTR MaLR 0 467 172 2111 142 0 13 chr10 38237752 38238068 -102078697 - AluSx SINE Alu 0 312 1 1545 218 59 35 chr10 38238068 38238190 -102078575 - MLT1C LTR MaLR -295 172 54 724 82 41 0 chr10 38238190 38238288 -102078477 - LTR12 LTR ERV1 -133 581 480 299 204 51 41 chr10 38238289 38238387 -102078378 - LTR30 LTR ERV1 -80 642 544 988 130 135 72 chr10 38238391 38238599 -102078166 - LTR12 LTR ERV1 -441 273 53 258 250 0 0 chr10 38238599 38238651 -102078114 - LTR30 LTR ERV1 -670 52 1 235 100 33 150 chr10 38238653 38238713 -102078052 - MLT1B LTR MaLR -336 54 2 1688 202 69 9 chr10 38238819 38239255 -102077510 + L1 LINE L1 3132 3593 -2553 2064 198 22 3 chr10 38239399 38239757 -102077008 + MLT1A1 LTR MaLR 1 365 0 2016 135 3 35 chr10 38240821 38240963 -102075802 + AluJo SINE Alu 1 146 -166 2220 89 0 54 chr10 38240963 38241276 -102075489 + AluY SINE Alu 1 296 -15 2016 135 3 35 chr10 38241276 38241452 -102075313 + AluJo SINE Alu 146 309 -3 928 176 0 0 chr10 38243360 38243525 -102073240 + L1MA4 LINE L1 6136 6300 0 598 321 149 28 chr10 38243555 38244057 -102072708 + L2 LINE L2 372 934 -2380 492 277 125 35 chr10 38244058 38244347 -102072418 + L2 LINE L2 1152 1466 -1848 6389 113 6 1 chr10 38244347 38245226 -102071539 - THE1B-int LTR MaLR -697 883 1 2218 140 50 34 chr10 38245226 38245584 -102071181 - THE1B LTR MaLR 0 364 1 1883 173 61 6 chr10 38245687 38246029 -102070736 - MLT1A1 LTR MaLR -4 361 1 564 153 12 0 chr10 38246275 38246360 -102070405 - Tigger7 DNA MER2_type -1 2490 2405 1208 197 120 58 chr10 38246362 38246515 -102070250 + MER2 DNA MER2_type 1 143 -202 2288 130 39 33 chr10 38246515 38246877 -102069888 + THE1B LTR MaLR 1 364 0 1208 197 120 58 chr10 38246877 38247048 -102069717 + MER2 DNA MER2_type 143 345 0 855 93 0 7 chr10 38247050 38247190 -102069575 - Tigger7 DNA MER2_type -87 2500 2362 594 238 16 8 chr10 38247412 38247538 -102069227 - L2 LINE L2 -1809 1505 1379 367 300 65 102 chr10 38247626 38247886 -102068879 + L2 LINE L2 2827 3064 -208 2510 150 30 30 chr10 38247886 38248312 -102068453 + MSTB LTR MaLR 1 426 0 367 300 65 102 chr10 38248312 38248514 -102068251 + L2 LINE L2 3064 3272 0 222 279 164 49 chr10 38250695 38250939 -102065826 - L3b LINE CR1 -92 1491 1220 2108 121 0 23 chr10 38251143 38251450 -102065315 - AluSq SINE Alu -13 300 1 654 168 0 0 chr10 38251602 38251703 -102065062 + AluJ/FLAM SINE Alu 2 102 -210 373 100 0 0 chr10 38251984 38252034 -102064731 + Alu SINE Alu 1 50 -250 911 209 0 0 chr10 38252352 38252510 -102064255 + FRAM SINE Alu 1 157 -19 21 36 0 0 chr10 38252514 38252542 -102064223 + AT_rich Low_complexity Low_complexity 1 28 0 344 303 110 26 chr10 38253990 38254145 -102062620 - MIR SINE MIR -92 170 3 1887 163 0 3 chr10 38254375 38254670 -102062095 - AluJo SINE Alu -18 294 1 352 298 107 0 chr10 38255896 38256017 -102060748 - MIR3 SINE MIR -22 186 53 2203 106 19 13 chr10 38256489 38256800 -102059965 + AluSq SINE Alu 1 313 0 326 277 26 26 chr10 38259553 38259708 -102057057 - L1MC4a LINE L1 -1845 5963 5809 778 312 70 19 chr10 38260067 38260596 -102056169 - HAL1 LINE L1 -794 1713 1158 450 248 9 18 chr10 38260597 38260710 -102056055 + L2 LINE L2 3194 3305 -8 528 223 100 92 chr10 38260716 38260967 -102055798 - HAL1 LINE L1 -1351 1156 904 287 288 14 50 chr10 38260977 38261116 -102055649 - HAL1 LINE L1 -1714 793 660 25 51 0 0 chr10 38262067 38262106 -102054659 + AT_rich Low_complexity Low_complexity 1 39 0 276 270 200 0 chr10 38262106 38262306 -102054459 - L1ME4a LINE L1 -1 6120 5881 2071 106 3 43 chr10 38262321 38262643 -102054122 + AluSc SINE Alu 1 309 0 261 301 52 23 chr10 38262762 38262935 -102053830 - L1ME4a LINE L1 -1018 5128 4951 962 150 6 6 chr10 38263135 38263295 -102053470 - FRAM SINE Alu -9 167 8 223 315 43 11 chr10 38263498 38263590 -102053175 + MIR SINE MIR 58 152 -110 2015 98 98 0 chr10 38263905 38264182 -102052583 + AluSx SINE Alu 1 304 -8 876 215 0 0 chr10 38264746 38264904 -102051861 + AluJb SINE Alu 137 294 -18 552 179 0 0 chr10 38264936 38265048 -102051717 + GA-rich Low_complexity Low_complexity 3 114 0 359 330 17 0 chr10 38265358 38265493 -102051272 + MIR SINE MIR 21 157 -68 635 274 74 16 chr10 38265650 38265840 -102050925 + MIR SINE MIR 41 241 -21 471 302 124 70 chr10 38266193 38266573 -102050192 + L2 LINE L2 1798 2221 -1093 1188 220 5 0 chr10 38266573 38266791 -102049974 - MER58A DNA MER1_type -3 221 3 471 302 124 70 chr10 38266791 38266992 -102049773 + L2 LINE L2 2221 2410 -904 454 271 82 0 chr10 38267054 38267176 -102049589 + MIR SINE MIR 25 156 -106 543 325 94 39 chr10 38267236 38267704 -102049061 + L2 LINE L2 2467 2960 -354 446 271 28 0 chr10 38268675 38268782 -102047983 - L2 LINE L2 0 3313 3204 951 154 0 146 chr10 38268844 38269084 -102047681 - MER3 DNA MER1_type -4 205 1 872 159 8 0 chr10 38269697 38269829 -102046936 + FLAM_C SINE Alu 1 133 0 323 231 160 59 chr10 38270067 38270236 -102046529 + MIR3 SINE MIR 13 198 -10 2948 98 0 3 chr10 38270460 38270836 -102045929 + THE1C LTR MaLR 1 375 0 1560 185 0 38 chr10 38271085 38271404 -102045361 - AluJo SINE Alu -5 307 1 426 251 11 6 chr10 38272306 38272481 -102044284 + (CA)n Simple_repeat Simple_repeat 2 177 0 450 0 0 0 chr10 38272610 38272660 -102044105 + (TG)n Simple_repeat Simple_repeat 1 50 0 407 59 0 0 chr10 38273560 38273611 -102043154 - MADE1 DNA Mariner -5 75 25 4239 36 2 0 chr10 38273611 38274106 -102042659 - L1PA5 LINE L1 -1704 4442 3947 8292 37 1 1 chr10 38274106 38275821 -102040944 + L1PA5 LINE L1 4439 6154 0 327 50 0 0 chr10 38275821 38275861 -102040904 - MADE1 DNA Mariner -40 40 1 1979 161 34 10 chr10 38276368 38276778 -102039987 - L1 LINE L1 -1481 4665 4246 239 356 150 28 chr10 38276874 38277121 -102039644 - L2 LINE L2 -3 3269 2993 849 167 0 0 chr10 38277316 38277529 -102039236 + (TG)n Simple_repeat Simple_repeat 1 213 0 404 315 5 79 chr10 38278812 38279028 -102037737 - MIR SINE MIR -43 219 20 224 235 15 73 chr10 38280298 38280366 -102036399 - L2 LINE L2 -1 3271 3208 1501 188 21 73 chr10 38280474 38280910 -102035855 + MLT1F LTR MaLR 130 542 0 205 353 66 22 chr10 38280917 38281053 -102035712 - L2 LINE L2 -31 3282 3141 243 273 63 77 chr10 38281490 38281633 -102035132 - L2 LINE L2 -9 3304 3164 686 228 76 84 chr10 38281699 38281962 -102034803 - MIR SINE MIR 0 262 2 1953 160 13 0 chr10 38282151 38282451 -102034314 + AluJo SINE Alu 1 304 -8 236 221 70 35 chr10 38282635 38282721 -102034044 + MIR SINE MIR 45 133 -75 22 56 0 0 chr10 38283510 38283546 -102033219 + AT_rich Low_complexity Low_complexity 1 36 0 2174 152 33 30 chr10 38283568 38283931 -102032834 - THE1B LTR MaLR 0 364 1 299 339 36 18 chr10 38283984 38284096 -102032669 - L2 LINE L2 -21 3251 3138 2441 118 113 13 chr10 38284260 38284649 -102032116 - MSTA LTR MaLR 0 428 1 317 268 29 80 chr10 38286526 38286664 -102030101 - MIR SINE MIR -113 149 19 318 343 57 11 chr10 38287334 38287509 -102029256 - MIR SINE MIR -53 209 27 360 0 0 0 chr10 38287531 38287571 -102029194 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 1149 69 29 0 chr10 38287571 38287746 -102029019 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 345 160 11 32 chr10 38287749 38287843 -102028922 + CT-rich Low_complexity Low_complexity 1 92 0 824 182 0 0 chr10 38287843 38287975 -102028790 - FRAM SINE Alu -25 151 20 337 179 24 5 chr10 38287987 38288072 -102028693 - L1P4 LINE L1 -370 5781 5693 470 295 60 7 chr10 38288649 38288798 -102027967 - MER69A DNA AcHobo -19 158 2 22 0 0 0 chr10 38289357 38289379 -102027386 + AT_rich Low_complexity Low_complexity 1 22 0 1445 158 0 0 chr10 38289441 38289656 -102027109 - AluSg/x SINE Alu -13 297 83 3234 161 19 3 chr10 38289656 38290220 -102026545 - L1MB3 LINE L1 -32 6151 5579 2154 152 128 8 chr10 38290288 38290670 -102026095 - MSTA LTR MaLR 0 428 1 204 111 0 0 chr10 38290890 38290926 -102025839 + (T)n Simple_repeat Simple_repeat 1 36 0 39 0 0 0 chr10 38291216 38291255 -102025510 + AT_rich Low_complexity Low_complexity 1 39 0 1526 196 7 0 chr10 38291258 38291538 -102025227 - AluJo SINE Alu -30 282 1 1341 203 3 38 chr10 38291879 38292000 -102024765 + AluJo SINE Alu 2 126 -186 2314 86 0 3 chr10 38292000 38292292 -102024473 - AluSc SINE Alu -18 291 1 1341 203 3 38 chr10 38292292 38292460 -102024305 + AluJo SINE Alu 126 281 -31 186 354 50 62 chr10 38293877 38293942 -102022823 + MIR SINE MIR 34 98 -164 1488 169 9 91 chr10 38293942 38294116 -102022649 - AluJo SINE Alu -18 294 156 2213 132 0 0 chr10 38294116 38294412 -102022353 - AluSq SINE Alu -17 296 1 1488 169 9 91 chr10 38294412 38294557 -102022208 - AluJo SINE Alu -156 156 1 186 354 50 62 chr10 38294557 38294652 -102022113 + MIR SINE MIR 98 192 -70 487 320 91 67 chr10 38294998 38295132 -102021633 - L2 LINE L2 -11 3302 3173 2261 127 0 0 chr10 38295132 38295439 -102021326 + AluSx SINE Alu 1 307 -5 487 320 91 67 chr10 38295439 38295676 -102021089 - L2 LINE L2 -140 3173 2922 966 180 0 0 chr10 38296711 38296872 -102019893 - FRAM SINE Alu -12 164 4 5802 119 23 11 chr10 38296872 38298417 -102018348 - L1MA3 LINE L1 -157 6148 4585 375 230 0 8 chr10 38298488 38298580 -102018185 + L1MC1 LINE L1 5678 5765 -356 7723 233 28 7 chr10 38298607 38300577 -102016188 - L1M4 LINE L1 -1069 5077 3074 30 27 0 0 chr10 38300594 38300631 -102016134 + AT_rich Low_complexity Low_complexity 1 37 0 260 172 0 47 chr10 38300637 38300701 -102016064 + L1MC1 LINE L1 5958 6018 -315 * 2484 159 43 50 chr10 38300693 38301365 -102015400 - L1MCa LINE L1 -4589 1837 1087 563 223 41 99 chr10 38301372 38301664 -102015101 + L1MC5 LINE L1 7657 7931 -30 250 277 96 12 chr10 38302587 38302670 -102014095 + MIR SINE MIR 3 92 -170 1154 174 28 9 chr10 38302716 38302928 -102013837 - Tigger1 DNA MER2_type -1 2417 2202 813 190 0 21 chr10 38302910 38303052 -102013713 - Tigger1 DNA MER2_type -2256 162 24 * 1395 176 0 62 chr10 38303061 38303367 -102013398 - L1MA7 LINE L1 -32 6259 5973 250 318 205 0 chr10 38303368 38303519 -102013246 + MIR SINE MIR 78 259 -3 1544 171 16 68 chr10 38303646 38303819 -102012946 - AluJo SINE Alu -7 305 155 2283 110 3 0 chr10 38303819 38304118 -102012647 - AluSx SINE Alu -12 300 1 1544 171 16 68 chr10 38304118 38304266 -102012499 - AluJo SINE Alu -157 155 1 2259 115 0 0 chr10 38304270 38304586 -102012179 - AluSx SINE Alu 0 316 1 229 276 181 9 chr10 38304606 38304722 -102012043 + L2 LINE L2 3178 3313 0 186 103 0 0 chr10 38307589 38307618 -102009147 + (T)n Simple_repeat Simple_repeat 1 29 0 294 287 223 25 chr10 38308534 38308736 -102008029 + L3 LINE CR1 517 758 -819 337 321 113 13 chr10 38308877 38309036 -102007729 + MIR SINE MIR 46 220 -42 619 193 37 0 chr10 38309120 38309255 -102007510 + FLAM_C SINE Alu 7 145 0 427 357 67 20 chr10 38309314 38309670 -102007095 + L3 LINE CR1 829 1201 -376 210 37 0 0 chr10 38309720 38309747 -102007018 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1287 146 0 119 chr10 38309756 38310024 -102006741 - AluJb SINE Alu -48 264 29 1878 224 43 14 chr10 38310065 38310551 -102006214 - MER74B LTR ERVL -67 555 56 369 311 105 31 chr10 38310564 38310821 -102005944 + L3 LINE CR1 1301 1576 -1 189 0 0 0 chr10 38311237 38311258 -102005507 + (T)n Simple_repeat Simple_repeat 1 21 0 324 239 11 23 chr10 38311352 38311440 -102005325 + MIR3 SINE MIR 119 205 -3 224 333 62 0 chr10 38311584 38311665 -102005100 - MIR SINE MIR -118 144 59 2352 88 0 22 chr10 38312083 38312401 -102004364 - AluY SINE Alu 0 311 1 991 168 0 0 chr10 38312421 38312582 -102004183 - L1MA3 LINE L1 -4 6301 6141 538 260 13 27 chr10 38313401 38313551 -102003214 + MIR SINE MIR 115 262 0 238 284 0 0 chr10 38313700 38313774 -102002991 + (TG)n Simple_repeat Simple_repeat 2 75 0 1188 205 3 48 chr10 38314518 38314686 -102002079 - AluJo SINE Alu -31 281 130 2328 82 0 3 chr10 38314686 38314978 -102001787 + AluSc SINE Alu 1 291 -18 1188 205 3 48 chr10 38314978 38315102 -102001663 - AluJo SINE Alu -182 130 2 1542 196 7 0 chr10 38315443 38315723 -102001042 + AluJo SINE Alu 1 282 -30 203 0 0 36 chr10 38315732 38315760 -102001005 + (TTAA)n Simple_repeat Simple_repeat 1 27 0 238 284 0 0 chr10 38316357 38316431 -102000334 + (CA)n Simple_repeat Simple_repeat 2 75 0 538 260 13 27 chr10 38316580 38316730 -102000035 - MIR SINE MIR 0 262 115 254 307 32 0 chr10 38316758 38316898 -101999867 + CT-rich Low_complexity Low_complexity 1 144 0 402 337 72 66 chr10 38316902 38317237 -101999528 - L2 LINE L2 -17 3255 2919 478 262 96 44 chr10 38317469 38317877 -101998888 - L1M4 LINE L1 -915 5231 4803 344 281 117 39 chr10 38317950 38318335 -101998430 - L1M4 LINE L1 -1459 4687 4273 2513 258 45 49 chr10 38318371 38319308 -101997457 + L1ME LINE L1 6 938 -5132 43623 35 22 1 chr10 38319348 38325376 -101991389 + L1PA3 LINE L1 1 6155 0 1423 266 53 67 chr10 38325369 38325567 -101991198 + L1ME LINE L1 970 1169 -5092 * 1720 165 53 3 chr10 38325567 38325852 -101990913 + AluJb SINE Alu 2 300 -12 1423 266 53 67 chr10 38325852 38326555 -101990210 + L1ME LINE L1 1169 1859 -4402 598 269 78 95 chr10 38326582 38326849 -101989916 - L1M4 LINE L1 -1899 4247 3977 5436 45 0 0 chr10 38326849 38327495 -101989270 + L1PA5 LINE L1 5522 6167 0 598 269 78 95 chr10 38327495 38327561 -101989204 - L1M4 LINE L1 -2169 3977 3911 2447 88 0 0 chr10 38327561 38327869 -101988896 - AluSx SINE Alu -4 308 1 598 269 78 95 chr10 38327869 38328356 -101988409 - L1M4 LINE L1 -2235 3911 3439 300 123 123 0 chr10 38328372 38328453 -101988312 + MSTA LTR MaLR 6 96 -332 488 264 77 79 chr10 38328663 38329167 -101987598 - L1MDa LINE L1 -2220 4320 3818 868 82 8 0 chr10 38329167 38329289 -101987476 + MSTA LTR MaLR 1 123 -305 526 291 113 25 chr10 38329329 38330044 -101986721 - L1MDa LINE L1 -2719 3821 3044 402 206 61 92 chr10 38330152 38330290 -101986475 - L1MDa LINE L1 -3794 2746 2605 216 0 0 0 chr10 38330290 38330314 -101986451 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1481 173 11 29 chr10 38330317 38330595 -101986170 - AluJo SINE Alu -31 281 9 402 206 61 92 chr10 38330595 38330680 -101986085 - L1MDa LINE L1 -3937 2603 2526 2180 142 0 0 chr10 38330704 38331015 -101985750 - AluSx SINE Alu -1 311 1 860 275 82 46 chr10 38331429 38331890 -101984875 - L1MDa LINE L1 -892 2009 1585 180 278 19 0 chr10 38332883 38332937 -101983828 - L2 LINE L2 -573 2741 2687 1695 172 14 10 chr10 38332937 38333234 -101983531 + AluJo SINE Alu 1 298 -14 606 28 0 0 chr10 38333637 38333709 -101983056 + (GGAA)n Simple_repeat Simple_repeat 1 72 0 3076 77 3 0 chr10 38335008 38335371 -101981394 + THE1B LTR MaLR 1 364 0 189 147 88 0 chr10 38337428 38337462 -101979303 - L2 LINE L2 -13 3300 3264 * 387 219 130 16 chr10 38337436 38337559 -101979206 - MIR SINE MIR -15 247 111 409 189 154 35 chr10 38338241 38338384 -101978381 + L2 LINE L2 3108 3267 -46 329 171 0 14 chr10 38338402 38338472 -101978293 + (TG)n Simple_repeat Simple_repeat 2 70 0 2050 161 0 0 chr10 38338511 38338815 -101977950 - AluSq SINE Alu -9 304 1 1749 145 17 14 chr10 38338885 38339175 -101977590 + MER47A DNA MER2_type 76 366 0 227 359 0 0 chr10 38339617 38339745 -101977020 - L1M4 LINE L1 -3072 3074 2947 1114 140 11 0 chr10 38339748 38339934 -101976831 - L1MA5 LINE L1 -1 6299 6112 2292 107 0 19 chr10 38339936 38340245 -101976520 + AluSq SINE Alu 1 303 -10 4777 89 5 2 chr10 38340257 38340507 -101976258 + L1PB1 LINE L1 5531 5779 -372 234 0 0 0 chr10 38340507 38340533 -101976232 + (TA)n Simple_repeat Simple_repeat 1 26 0 4777 89 5 2 chr10 38340533 38340899 -101975866 + L1PB1 LINE L1 5779 6149 -2 337 285 81 99 chr10 38340940 38341386 -101975379 - L1M4 LINE L1 -3169 2977 2540 1684 188 3 26 chr10 38342392 38342700 -101974065 + AluJo SINE Alu 5 305 -7 1950 139 4 0 chr10 38343301 38343625 -101973140 + AluSx SINE Alu 1 325 0 216 122 0 0 chr10 38343822 38343863 -101972902 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 473 279 150 27 chr10 38344037 38344467 -101972298 - LTR33 LTR ERVL -19 502 1 217 334 93 72 chr10 38344643 38345020 -101971745 + L2 LINE L2 2807 3191 -81 207 304 80 9 chr10 38346862 38346974 -101969791 + MIR SINE MIR 46 165 -97 267 349 48 24 chr10 38347068 38347194 -101969571 + MIR SINE MIR 16 144 -64 1215 190 5 0 chr10 38347361 38347572 -101969193 - L1PA16 LINE L1 -9 6157 5946 737 211 0 0 chr10 38347574 38347702 -101969063 - FLAM_A SINE Alu -5 128 1 323 228 69 10 chr10 38347714 38347815 -101968950 - MIR SINE MIR -74 188 82 234 62 0 0 chr10 38348318 38348350 -101968415 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 3220 190 34 19 chr10 38349377 38349998 -101966767 - LTR27 LTR ERV1 0 636 7 203 242 16 16 chr10 38350509 38350571 -101966194 + T-rich Low_complexity Low_complexity 2 63 0 247 308 176 22 chr10 38350791 38351018 -101965747 - MIR SINE MIR 0 262 1 653 219 163 0 chr10 38351027 38351187 -101965578 - MER5A DNA MER1_type -3 186 1 441 0 0 0 chr10 38354538 38354587 -101962178 + (TA)n Simple_repeat Simple_repeat 1 49 0 2468 82 3 0 chr10 38354952 38355257 -101961508 + AluSp SINE Alu 1 306 -7 5963 138 18 4 chr10 38355412 38356486 -101960279 + L1PA13 LINE L1 5048 6161 -2 847 201 44 136 chr10 38356488 38356818 -101959947 + L1ME1 LINE L1 5877 6164 0 21 36 0 0 chr10 38356818 38356846 -101959919 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 38356858 38356879 -101959886 + AT_rich Low_complexity Low_complexity 1 21 0 1916 105 108 0 chr10 38358702 38358979 -101957786 - AluSx SINE Alu -5 307 1 251 309 43 68 chr10 38359076 38359238 -101957527 + MIR SINE MIR 28 185 -77 327 78 0 0 chr10 38360187 38360238 -101956527 + (TG)n Simple_repeat Simple_repeat 2 52 0 2188 101 14 0 chr10 38360238 38360525 -101956240 - AluSp SINE Alu -22 291 1 2414 86 0 0 chr10 38361466 38361769 -101954996 - AluY SINE Alu -7 304 2 4232 93 21 5 chr10 38361775 38362355 -101954410 - L1MA3 LINE L1 -2 6303 5715 360 0 0 0 chr10 38362586 38362626 -101954139 + (TG)n Simple_repeat Simple_repeat 2 41 0 183 345 71 9 chr10 38363333 38363446 -101953319 - MIR SINE MIR -64 144 25 294 250 250 7 chr10 38363481 38363621 -101953144 + MIR SINE MIR 1 174 -88 615 258 19 6 chr10 38363658 38363817 -101952948 - MIR SINE MIR 0 262 102 2460 86 0 0 chr10 38363926 38364229 -101952536 + AluSx SINE Alu 1 303 -9 894 221 7 0 chr10 38366141 38366295 -101950470 - FRAM SINE Alu -11 155 1 193 218 0 184 chr10 38366330 38366378 -101950387 + L2 LINE L2 3243 3270 -43 687 250 113 79 chr10 38366378 38366910 -101949855 - MLT1H1 LTR MaLR -4 551 2 193 218 0 184 chr10 38366910 38366948 -101949817 + L2 LINE L2 3270 3313 0 3936 135 75 26 chr10 38367463 38368116 -101948649 - L1PA14 LINE L1 -12 6149 5465 375 307 105 66 chr10 38368605 38369207 -101947558 - L2 LINE L2 -337 2977 2353 1752 126 24 37 chr10 38369213 38369507 -101947258 + AluJo SINE Alu 1 290 -22 183 236 303 0 chr10 38369705 38369794 -101946971 + MER5A DNA MER1_type 45 160 -29 305 251 105 55 chr10 38372192 38372482 -101944283 - L1ME LINE L1 -425 5696 5385 397 288 71 41 chr10 38372616 38373009 -101943756 - L1ME LINE L1 -962 5184 4780 189 298 0 0 chr10 38373377 38373424 -101943341 - MIR SINE MIR -10 252 206 360 309 112 20 chr10 38373634 38373786 -101942979 + MIR3 SINE MIR 40 205 -3 229 196 36 45 chr10 38374075 38374187 -101942578 + (TATAA)n Simple_repeat Simple_repeat 3 113 0 221 191 0 0 chr10 38374265 38374307 -101942458 - MIR SINE MIR -108 154 113 27 0 0 0 chr10 38375650 38375677 -101941088 + AT_rich Low_complexity Low_complexity 1 27 0 3904 193 69 28 chr10 38375695 38376667 -101940098 - L1MC3 LINE L1 -16 7769 6733 350 284 47 24 chr10 38377656 38377783 -101938982 + MIR3 SINE MIR 51 180 -28 361 360 52 0 chr10 38378291 38378427 -101938338 - MIR3 SINE MIR -28 180 38 216 354 38 0 chr10 38378473 38378552 -101938213 + L2 LINE L2 3191 3272 -41 530 321 19 71 chr10 38378656 38378964 -101937801 - L2 LINE L2 -3 3269 2978 2150 130 0 0 chr10 38379410 38379703 -101937062 + AluSx SINE Alu 1 293 -19 233 329 31 31 chr10 38380155 38380316 -101936449 - L2 LINE L2 -783 2531 2371 2028 134 3 16 chr10 38380462 38380769 -101935996 - AluSq SINE Alu -10 303 1 235 284 181 0 chr10 38380833 38380949 -101935816 - MIR3 SINE MIR -30 178 42 1411 185 4 36 chr10 38382650 38382926 -101933839 - AluJb SINE Alu -25 287 21 700 200 33 0 chr10 38382944 38383064 -101933701 - FLAM_C SINE Alu -9 124 1 31 44 0 0 chr10 38384574 38384619 -101932146 + AT_rich Low_complexity Low_complexity 1 45 0 238 354 83 21 chr10 38384740 38384884 -101931881 - MIR SINE MIR -90 172 20 206 206 16 0 chr10 38385591 38385654 -101931111 + (TG)n Simple_repeat Simple_repeat 2 65 0 186 289 44 0 chr10 38386495 38386540 -101930225 - MIR SINE MIR -126 82 36 1890 128 30 0 chr10 38389696 38389962 -101926803 + AluSx SINE Alu 17 290 -22 333 303 121 0 chr10 38391167 38391299 -101925466 - L2 LINE L2 -7 3265 3118 937 219 11 22 chr10 38391347 38391525 -101925240 + MER45A DNA AcHobo 1 176 -2 5756 79 32 0 chr10 38391826 38392602 -101924163 - L1PA11 LINE L1 -1 6173 5373 532 290 52 26 chr10 38392602 38392833 -101923932 - L2 LINE L2 -27 3286 3050 514 185 0 0 chr10 38392972 38393053 -101923712 + AluJ/FLAM SINE Alu 2 82 -230 54 68 0 0 chr10 38393564 38393667 -101923098 + AT_rich Low_complexity Low_complexity 1 103 0 2175 113 0 3 chr10 38394103 38394405 -101922360 - AluSq SINE Alu -12 301 1 224 219 0 0 chr10 38397935 38397976 -101918789 + CT-rich Low_complexity Low_complexity 6 46 0 1837 219 27 3 chr10 38398432 38398807 -101917958 - MLT1B LTR MaLR -6 384 1 256 346 19 9 chr10 38398953 38399060 -101917705 + MER5A DNA MER1_type 79 186 -3 393 328 78 47 chr10 38399147 38399632 -101917133 + L2 LINE L2 2257 2756 -558 183 247 86 32 chr10 38399668 38399761 -101917004 - MER5A DNA MER1_type -24 165 68 207 344 131 0 chr10 38399954 38400076 -101916689 + L2 LINE L2 2943 3080 -192 215 238 0 0 chr10 38400186 38400228 -101916537 + L2 LINE L2 3270 3311 -2 1501 207 7 13 chr10 38400481 38400780 -101915985 + AluJo SINE Alu 3 299 -13 952 248 39 70 chr10 38400834 38401352 -101915413 + MLT1H LTR MaLR 6 549 0 353 366 57 18 chr10 38402437 38402664 -101914101 + MIR SINE MIR 7 242 -20 1760 160 20 10 chr10 38404596 38404896 -101911869 + AluJb SINE Alu 1 303 -9 2102 122 3 3 chr10 38405510 38405797 -101910968 - AluSq SINE Alu -26 287 1 3782 133 3 5 chr10 38406065 38406672 -101910093 + L1PA16 LINE L1 5420 6025 -141 839 109 0 0 chr10 38406686 38406796 -101909969 + AluSq/x SINE Alu 1 110 -203 1386 151 0 46 chr10 38406908 38407034 -101909731 + L1PA16 LINE L1 5914 6023 -143 2248 107 0 3 chr10 38407034 38407334 -101909431 + AluSx SINE Alu 1 299 -13 1386 151 0 46 chr10 38407334 38407466 -101909299 + L1PA16 LINE L1 6023 6160 -6 919 245 14 0 chr10 38407475 38407687 -101909078 - MER20 DNA MER1_type -3 216 2 22 0 0 0 chr10 38407993 38408015 -101908750 + AT_rich Low_complexity Low_complexity 1 22 0 218 322 78 92 chr10 38408487 38408770 -101907995 + L2 LINE L2 2924 3202 -70 1737 157 14 17 chr10 38410261 38410554 -101906211 - AluJo SINE Alu -20 292 1 205 333 207 30 chr10 38410918 38411053 -101905712 + L2 LINE L2 3114 3272 0 216 111 0 0 chr10 38411742 38411778 -101904987 + (CA)n Simple_repeat Simple_repeat 2 37 0 180 231 0 0 chr10 38413900 38413978 -101902787 + (TA)n Simple_repeat Simple_repeat 2 79 0 1654 176 11 0 chr10 38413998 38414270 -101902495 - AluJb SINE Alu -37 275 1 886 234 46 0 chr10 38414404 38414601 -101902164 + MIR SINE MIR 3 208 -54 517 187 16 41 chr10 38415813 38415936 -101900829 + MER45A DNA AcHobo 54 173 -5 21 0 0 0 chr10 38416892 38416913 -101899852 + AT_rich Low_complexity Low_complexity 1 21 0 2089 121 0 7 chr10 38417167 38417457 -101899308 - AluSx SINE Alu -24 288 1 666 230 29 35 chr10 38417634 38417808 -101898957 + MER5B DNA MER1_type 1 173 -5 334 296 72 16 chr10 38417823 38417948 -101898817 - MER5A DNA MER1_type 0 189 58 306 367 47 33 chr10 38418234 38418596 -101898169 - L2 LINE L2 -1906 1408 1042 2953 133 4 0 chr10 38418968 38419418 -101897347 - L1PA16 LINE L1 -9 6157 5706 2100 114 24 0 chr10 38420044 38420164 -101896601 + AluSx SINE Alu 4 120 -192 387 0 0 0 chr10 38420164 38420207 -101896558 + (CA)n Simple_repeat Simple_repeat 2 44 0 2100 114 24 0 chr10 38420207 38420376 -101896389 + AluSx SINE Alu 120 300 -12 277 319 101 0 chr10 38420620 38420739 -101896026 + L2 LINE L2 3142 3272 0 21 0 0 0 chr10 38421479 38421500 -101895265 + AT_rich Low_complexity Low_complexity 1 21 0 466 91 26 0 chr10 38422169 38422246 -101894519 + (TTCC)n Simple_repeat Simple_repeat 4 82 0 232 352 93 62 chr10 38422442 38422635 -101894130 - L2 LINE L2 -6 3266 3068 429 287 12 57 chr10 38424739 38424986 -101891779 + MER106A DNA MER1_type 1 236 0 1772 111 100 7 chr10 38424995 38425265 -101891500 + AluSx SINE Alu 7 301 -11 24 53 0 0 chr10 38425853 38425891 -101890874 + AT_rich Low_complexity Low_complexity 1 38 0 8622 153 106 67 chr10 38426443 38427213 -101889552 + L1MCa LINE L1 7 745 -5681 1680 186 0 21 chr10 38427213 38427498 -101889267 - AluJo SINE Alu -33 279 1 8622 153 106 67 chr10 38427498 38428478 -101888287 + L1MCa LINE L1 745 1874 -4552 5685 37 0 0 chr10 38428478 38429155 -101887610 + L1PA4 LINE L1 5474 6150 -5 8622 153 106 67 chr10 38429155 38429727 -101887038 + L1MCa LINE L1 1874 2422 -4004 1388 197 25 6 chr10 38429723 38430088 -101886677 + L1MCa LINE L1 3123 3494 -2932 * 4681 223 64 9 chr10 38430091 38431981 -101884784 + L1MCa LINE L1 3910 5911 -702 859 273 78 6 chr10 38431997 38432345 -101884420 + MLT1C LTR MaLR 83 455 -12 528 262 77 22 chr10 38432371 38432554 -101884211 + MIR SINE MIR 23 215 -47 2323 161 29 7 chr10 38432849 38433258 -101883507 + MSTB LTR MaLR 1 418 -8 198 0 0 0 chr10 38434044 38434066 -101882699 + (A)n Simple_repeat Simple_repeat 1 22 0 2567 168 17 0 chr10 38434307 38434725 -101882040 - MSTB LTR MaLR 0 426 2 285 242 42 21 chr10 38436729 38436824 -101879941 + CT-rich Low_complexity Low_complexity 4 100 0 752 276 5 23 chr10 38437446 38437663 -101879102 - Charlie1 DNA MER1_type -2542 219 7 345 302 18 12 chr10 38437862 38438031 -101878734 + CT-rich Low_complexity Low_complexity 1 170 0 266 296 80 63 chr10 38438167 38438335 -101878430 - L1M4 LINE L1 -2979 3167 3003 3136 149 0 13 chr10 38438335 38438864 -101877901 - L1PA16 LINE L1 0 6166 5645 266 296 80 63 chr10 38438864 38439455 -101877310 - L1M4 LINE L1 -3143 3003 2395 5571 236 75 34 chr10 38440116 38440772 -101875993 - L1ME1 LINE L1 -5 6230 5602 1139 261 4 0 chr10 38440772 38441010 -101875755 + MER8 DNA MER2_type 1 239 0 5571 236 75 34 chr10 38441010 38443627 -101873138 - L1ME1 LINE L1 -633 5602 2835 439 275 79 4 chr10 38443632 38443861 -101872904 - L1ME1 LINE L1 -3698 2517 2272 180 0 0 0 chr10 38443868 38443888 -101872877 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 2864 72 0 0 chr10 38443888 38444275 -101872490 - L1PA8 LINE L1 -24 6148 5762 243 259 12 0 chr10 38444293 38444378 -101872387 - L1ME1 LINE L1 -4085 2311 2226 269 286 19 67 chr10 38444383 38444488 -101872277 + MIR SINE MIR 163 262 0 338 57 19 0 chr10 38445339 38445392 -101871373 + (TA)n Simple_repeat Simple_repeat 1 54 0 688 157 0 98 chr10 38446370 38446523 -101870242 + FLAM_C SINE Alu 5 142 -1 900 196 0 0 chr10 38446550 38446693 -101870072 + AluJb SINE Alu 140 282 -30 216 0 0 0 chr10 38446697 38446721 -101870044 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 396 219 23 0 chr10 38448311 38448439 -101868326 + (TG)n Simple_repeat Simple_repeat 1 131 0 180 237 129 54 chr10 38449086 38449179 -101867586 + MIR3 SINE MIR 12 111 -97 237 193 67 118 chr10 38449373 38449492 -101867273 - MER94 DNA DNA -15 119 7 21 36 0 0 chr10 38450538 38450566 -101866199 + AT_rich Low_complexity Low_complexity 1 28 0 185 339 42 73 chr10 38450669 38450861 -101865904 - L2 LINE L2 -358 2956 2771 707 194 58 7 chr10 38451344 38451499 -101865266 - MIR SINE MIR -10 252 90 740 219 0 0 chr10 38452176 38452295 -101864470 - FLAM_A SINE Alu -17 125 7 416 298 14 93 chr10 38452318 38452607 -101864158 + L1MC4a LINE L1 2061 2326 -4070 258 254 32 24 chr10 38452728 38452854 -101863911 + L1MC4a LINE L1 3836 3962 -2253 344 256 146 25 chr10 38453174 38453373 -101863392 + L1MC4a LINE L1 5778 6000 -1877 421 178 0 0 chr10 38453686 38453759 -101863006 - AluJ/FLAM SINE Alu -235 77 5 1705 157 16 42 chr10 38454790 38455096 -101861669 - AluJo SINE Alu -13 299 2 213 356 20 94 chr10 38455117 38455266 -101861499 + L2 LINE L2 3127 3264 -8 1757 177 0 10 chr10 38455402 38455707 -101861058 - AluJo SINE Alu -9 303 2 263 270 106 74 chr10 38455820 38456009 -101860756 - L3b LINE CR1 -119 1464 1270 790 147 7 44 chr10 38456951 38457087 -101859678 - FLAM_C SINE Alu -10 133 3 521 301 38 60 chr10 38457202 38457468 -101859297 - MIR SINE MIR 0 262 3 1774 199 145 43 chr10 38458356 38458824 -101857941 - MLT2B1 LTR ERVL -2 518 3 811 175 32 0 chr10 38458919 38459045 -101857720 + FLAM_C SINE Alu 1 130 -3 2127 99 0 13 chr10 38459180 38459482 -101857283 - AluY SINE Alu -13 298 1 5230 189 46 57 chr10 38460260 38460888 -101855877 - Charlie1a DNA MER1_type -1308 1453 820 1632 169 10 24 chr10 38460888 38461183 -101855582 + AluJo SINE Alu 1 291 -21 5230 189 46 57 chr10 38461183 38461956 -101854809 - Charlie1a DNA MER1_type -1941 820 1 1779 142 0 0 chr10 38461973 38462219 -101854546 + AluSx SINE Alu 46 291 -21 472 213 148 7 chr10 38462227 38462382 -101854383 - MIR SINE MIR -21 241 65 2636 123 72 29 chr10 38462825 38463239 -101853526 + MSTB1 LTR MaLR 1 432 0 2451 151 29 39 chr10 38464043 38464420 -101852345 + MLT2D LTR ERVL 1 375 -39 333 0 0 0 chr10 38464420 38464457 -101852308 + (TG)n Simple_repeat Simple_repeat 2 38 0 2451 151 29 39 chr10 38464457 38464495 -101852270 + MLT2D LTR ERVL 375 412 -2 483 246 46 8 chr10 38464616 38464746 -101852019 + MER5B DNA MER1_type 1 135 -43 189 0 0 0 chr10 38465206 38465227 -101851538 + (A)n Simple_repeat Simple_repeat 1 21 0 189 0 0 0 chr10 38466750 38466771 -101849994 + (T)n Simple_repeat Simple_repeat 1 21 0 189 0 0 0 chr10 38466829 38466850 -101849915 + (TG)n Simple_repeat Simple_repeat 2 22 0 695 273 162 23 chr10 38466857 38467245 -101849520 + L1ME4a LINE L1 5678 6119 -2 190 315 101 0 chr10 38467357 38467446 -101849319 - L2 LINE L2 0 3272 3175 3467 119 0 39 chr10 38467597 38468133 -101848632 + L1PB1 LINE L1 5637 6151 0 257 258 59 102 chr10 38468343 38468529 -101848236 - MER112 DNA MER1_type 0 260 83 1122 273 60 13 chr10 38468537 38468918 -101847847 - L1MD2 LINE L1 -4 6355 5957 1390 105 0 0 chr10 38468996 38469177 -101847588 - AluSq SINE Alu -8 305 125 215 277 42 67 chr10 38469240 38469359 -101847406 - L2 LINE L2 -569 2745 2630 196 154 39 0 chr10 38469399 38469451 -101847314 + CT-rich Low_complexity Low_complexity 4 57 0 24 32 0 0 chr10 38470381 38470412 -101846353 + AT_rich Low_complexity Low_complexity 1 31 0 40247 34 1 1 chr10 38470438 38475967 -101840798 - L1PA4 LINE L1 -3 6152 623 735 69 0 0 chr10 38475965 38476052 -101840713 - L1PA4 LINE L1 -6048 98 12 * 387 41 0 0 chr10 38478126 38478175 -101838590 + (TG)n Simple_repeat Simple_repeat 1 49 0 27 0 0 0 chr10 38478425 38478452 -101838313 + AT_rich Low_complexity Low_complexity 1 27 0 2304 96 20 0 chr10 38478693 38478996 -101837769 - AluSx SINE Alu -3 309 1 2258 102 34 57 chr10 38479310 38479694 -101837071 + THE1C LTR MaLR 1 375 0 29 47 0 0 chr10 38480286 38480329 -101836436 + AT_rich Low_complexity Low_complexity 1 43 0 1873 165 43 12 chr10 38481468 38481795 -101834970 + MER1B DNA MER1_type 1 337 0 759 234 129 10 chr10 38482494 38482703 -101834062 - MIR SINE MIR 0 262 29 1352 175 6 127 chr10 38484159 38484497 -101832268 - AluJb SINE Alu -15 297 1 325 369 157 10 chr10 38484791 38484989 -101831776 + MIR SINE MIR 36 262 0 1720 234 151 41 chr10 38484997 38485506 -101831259 + MLT1F1 LTR MaLR 3 567 0 409 330 34 62 chr10 38485788 38486140 -101830625 + L2 LINE L2 2545 2886 -428 508 231 27 12 chr10 38486390 38486536 -101830229 + MLT1H LTR MaLR 412 547 -2 353 307 139 0 chr10 38486536 38486673 -101830092 + L2 LINE L2 2905 3060 -253 3925 225 48 23 chr10 38486705 38487204 -101829561 - MER21B LTR ERV1 -11 852 322 2132 127 10 0 chr10 38487204 38487511 -101829254 - AluSp SINE Alu -3 310 1 3925 225 48 23 chr10 38487511 38487842 -101828923 - MER21B LTR ERV1 -541 322 1 2227 112 3 0 chr10 38488005 38488301 -101828464 + AluSx SINE Alu 1 297 -15 342 349 89 19 chr10 38488389 38488704 -101828061 + L2 LINE L2 2641 2977 -337 1982 266 101 39 chr10 38488899 38490063 -101826702 - L2 LINE L2 -27 3286 2046 305 322 0 0 chr10 38490236 38490323 -101826442 + L2 LINE L2 3184 3270 -2 837 228 0 0 chr10 38491686 38491844 -101824921 - FRAM SINE Alu -17 159 2 1293 59 65 6 chr10 38491929 38492099 -101824666 + L1PA5 LINE L1 5975 6154 0 201 188 281 31 chr10 38493223 38493319 -101823446 - MIR SINE MIR -126 136 17 307 331 116 0 chr10 38493466 38493587 -101823178 - L2 LINE L2 -2 3270 3136 1249 107 0 37 chr10 38493701 38493888 -101822877 - AluSx SINE Alu -132 180 1 215 263 163 0 chr10 38494419 38494499 -101822266 + L2 LINE L2 3148 3240 -32 213 121 0 0 chr10 38494515 38494548 -101822217 + (TTTC)n Simple_repeat Simple_repeat 3 35 0 5372 106 23 1 chr10 38497389 38498161 -101818604 - L1PA11 LINE L1 -1 6173 5385 230 276 0 13 chr10 38498293 38498369 -101818396 - HAL1 LINE L1 -1429 1078 1004 1056 251 72 38 chr10 38498369 38498760 -101818005 - L2 LINE L2 -755 2559 2156 517 146 117 58 chr10 38499941 38500044 -101816721 + AluJo SINE Alu 84 192 -120 711 157 0 0 chr10 38500243 38500345 -101816420 + AluJo SINE Alu 197 298 -14 620 282 46 5 chr10 38500955 38501171 -101815594 + LTR33 LTR ERVL 297 521 0 353 293 80 63 chr10 38501932 38502330 -101814435 + LTR33 LTR ERVL 70 498 -25 1522 96 18 9 chr10 38502728 38502946 -101813819 + AluSq SINE Alu 91 310 -3 24 91 0 0 chr10 38503072 38503138 -101813627 + AT_rich Low_complexity Low_complexity 1 66 0 2160 223 15 33 chr10 38503841 38504443 -101812322 - L1MB8 LINE L1 -1 6246 5656 727 186 41 71 chr10 38504443 38504732 -101812033 + MLT1A2 LTR MaLR 1 336 -38 9525 238 49 23 chr10 38504747 38508396 -101808369 - L1MB8 LINE L1 -587 5660 1956 2504 79 0 0 chr10 38508396 38508700 -101808065 - AluY SINE Alu -7 304 1 9525 238 49 23 chr10 38508700 38508783 -101807982 - L1MB8 LINE L1 -4291 1956 1877 781 296 47 0 chr10 38509098 38509395 -101807370 - L1MEc LINE L1 -4574 2564 2254 6372 80 20 6 chr10 38509398 38510511 -101806254 + L1PA13 LINE L1 5025 6152 -11 227 278 0 0 chr10 38510809 38510881 -101805884 - L1MEc LINE L1 -4846 2113 2042 1938 281 38 20 chr10 38510885 38511494 -101805271 - L1MEc LINE L1 -6233 626 7 291 317 0 0 chr10 38513044 38513126 -101803639 + (CATATA)n Simple_repeat Simple_repeat 4 85 0 331 193 307 0 chr10 38514511 38514599 -101802166 - MIR3 SINE MIR -13 195 81 366 258 75 33 chr10 38515704 38515824 -101800941 - MIR3 SINE MIR -19 189 65 311 279 195 19 chr10 38517081 38517235 -101799530 - MIR SINE MIR -41 221 41 2100 175 24 5 chr10 38517246 38517663 -101799102 - L1MB1 LINE L1 0 6168 5744 347 177 40 7 chr10 38518959 38519038 -101797727 + MIR SINE MIR 86 145 -63 2205 117 45 31 chr10 38520328 38520687 -101796078 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr10 38521073 38521094 -101795671 + AT_rich Low_complexity Low_complexity 1 21 0 1990 157 71 8 chr10 38522472 38522868 -101793897 - MSTA LTR MaLR -7 421 1 200 33 0 33 chr10 38523026 38523056 -101793709 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 1475 106 15 0 chr10 38523116 38523315 -101793450 - AluSg/x SINE Alu -1 309 108 23 0 0 0 chr10 38523663 38523686 -101793079 + AT_rich Low_complexity Low_complexity 1 23 0 6678 21 0 1 chr10 38523976 38524785 -101791980 - L1PA3 LINE L1 -3 6152 5345 2252 108 0 25 chr10 38524815 38525130 -101791635 + AluSq SINE Alu 1 307 -6 193 365 46 51 chr10 38527235 38527668 -101789097 + L2 LINE L2 2462 2892 -422 180 118 0 59 chr10 38527977 38528011 -101788754 + L2 LINE L2 1198 1229 -2085 5826 191 164 40 chr10 38528475 38530036 -101786729 + MER52A LTR ERV1 1 1755 0 23 78 0 0 chr10 38530860 38530911 -101785854 + AT_rich Low_complexity Low_complexity 1 51 0 206 31 0 31 chr10 38532062 38532094 -101784671 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 799 253 115 59 chr10 38532276 38532833 -101783932 + MLT1G LTR MaLR 1 588 -2 377 69 0 17 chr10 38533134 38533192 -101783573 + (TG)n Simple_repeat Simple_repeat 2 58 0 203 184 0 0 chr10 38533898 38533936 -101782829 + (TA)n Simple_repeat Simple_repeat 2 39 0 799 196 17 39 chr10 38533986 38534165 -101782600 - FRAM SINE Alu -1 175 1 506 312 73 14 chr10 38534834 38535052 -101781713 - MIR SINE MIR 0 262 32 1658 159 11 22 chr10 38535976 38536253 -101780512 - AluJb SINE Alu -24 288 15 273 29 0 0 chr10 38537345 38537379 -101779386 + (TC)n Simple_repeat Simple_repeat 1 34 0 273 29 0 0 chr10 38537378 38537412 -101779353 + (CA)n Simple_repeat Simple_repeat 1 34 0 371 363 86 25 chr10 38538205 38538483 -101778282 + L3b LINE CR1 1116 1410 -173 2587 174 36 12 chr10 38539026 38539606 -101777159 - L1MC3 LINE L1 -1 7784 7191 226 289 48 0 chr10 38539609 38539692 -101777073 - MLT1F1 LTR MaLR -442 125 39 894 204 52 0 chr10 38539695 38539925 -101776840 - L1MC3 LINE L1 -687 7098 6857 * 21904 180 23 15 chr10 38539919 38545927 -101770838 - L1PA11 LINE L1 -1 7611 728 1916 107 0 8 chr10 38545927 38546190 -101770575 + AluSx SINE Alu 36 296 -16 21904 180 23 15 chr10 38546190 38546924 -101769841 - L1PA11 LINE L1 -6884 728 1 4339 216 105 31 chr10 38546918 38548825 -101767940 - L1MD3 LINE L1 -743 5403 4848 * 1232 220 178 48 chr10 38549199 38549659 -101767106 + MLT2B1 LTR ERVL 1 520 0 2220 123 0 3 chr10 38550671 38550980 -101765785 - AluSc SINE Alu -1 308 1 584 343 48 66 chr10 38553205 38553703 -101763062 - L2 LINE L2 -17 3296 2808 446 284 7 47 chr10 38553698 38553846 -101762919 - MIR SINE MIR -10 252 111 * 644 334 44 39 chr10 38553926 38554315 -101762450 - L2 LINE L2 -521 2793 2403 829 253 4 56 chr10 38554320 38554569 -101762196 - MIR SINE MIR -2 260 25 3124 140 15 39 chr10 38554614 38554721 -101762044 - MER1A DNA MER1_type -2175 525 417 2055 117 0 37 chr10 38554721 38555045 -101761720 - AluSx SINE Alu 0 312 1 3124 140 15 39 chr10 38555045 38555474 -101761291 - MER1A DNA MER1_type -2283 417 2 565 241 52 31 chr10 38555522 38555713 -101761052 - L2 LINE L2 -939 2375 2181 337 279 29 88 chr10 38555734 38555870 -101760895 - MIR SINE MIR -21 241 114 187 229 243 0 chr10 38555877 38555947 -101760818 + MIR SINE MIR 175 261 -1 21 57 0 0 chr10 38557034 38557069 -101759696 + AT_rich Low_complexity Low_complexity 1 35 0 1903 131 178 8 chr10 38557152 38557316 -101759449 + MSTA LTR MaLR 1 136 -292 4450 97 5 3 chr10 38557316 38557937 -101758828 + L1PA10 LINE L1 5545 6166 -2 1903 131 178 8 chr10 38557937 38558132 -101758633 + MSTA LTR MaLR 136 421 -7 228 227 80 0 chr10 38558142 38558217 -101758548 - HAL1 LINE L1 -105 2402 2322 323 265 99 63 chr10 38558220 38558443 -101758322 - HAL1 LINE L1 -213 2294 2064 354 308 107 6 chr10 38558742 38558901 -101757864 - L1ME3A LINE L1 -233 5937 5763 5451 129 103 11 chr10 38558901 38559884 -101756881 - Tigger3b DNA MER2_type -157 1074 2 644 223 99 20 chr10 38559884 38560085 -101756680 + MER2 DNA MER2_type 129 345 0 568 299 65 34 chr10 38560100 38560499 -101756266 - L1ME3A LINE L1 -403 5718 5313 9442 210 53 14 chr10 38560518 38561045 -101755720 + L1MC1 LINE L1 436 941 -5485 2360 64 0 3 chr10 38561045 38561341 -101755424 + AluY SINE Alu 1 295 -16 9442 210 53 14 chr10 38561341 38565300 -101751465 + L1MC1 LINE L1 941 5097 -1329 889 172 30 10 chr10 38565290 38565493 -101751272 + L1MC1 LINE L1 5597 5875 -749 * 2207 19 0 0 chr10 38565500 38565759 -101751006 + L1PA3 LINE L1 5894 6152 -3 3904 144 61 14 chr10 38565815 38566521 -101750244 + L1MC1 LINE L1 5875 6613 0 1134 148 21 93 chr10 38566521 38566848 -101749917 - MER96B DNA MER1_type? -69 348 46 303 370 31 0 chr10 38566869 38566996 -101749769 + MIR SINE MIR 119 249 -13 326 338 127 42 chr10 38567581 38567794 -101748971 - MLT1I LTR MaLR -75 334 104 259 288 107 12 chr10 38568480 38568803 -101747962 - L1ME LINE L1 -489 5632 5279 2119 112 0 7 chr10 38568849 38569144 -101747621 + AluSg SINE Alu 1 293 -17 45 19 0 0 chr10 38569371 38569423 -101747342 + AT_rich Low_complexity Low_complexity 1 52 0 2376 129 3 11 chr10 38569440 38569811 -101746954 - L1PB4 LINE L1 -13 6143 5776 336 202 0 26 chr10 38569880 38569994 -101746771 + (TA)n Simple_repeat Simple_repeat 2 112 0 2711 140 2 2 chr10 38569994 38570438 -101746327 - L1PB4 LINE L1 -367 5789 5346 30 45 0 0 chr10 38570869 38570913 -101745852 + AT_rich Low_complexity Low_complexity 1 44 0 399 185 33 11 chr10 38571518 38571610 -101745155 + L1MA9 LINE L1 6191 6284 -28 186 236 55 0 chr10 38572560 38572615 -101744150 - MIR SINE MIR -46 216 159 198 103 0 0 chr10 38572809 38572838 -101743927 + (TG)n Simple_repeat Simple_repeat 2 30 0 31 26 0 0 chr10 38573585 38573623 -101743142 + AT_rich Low_complexity Low_complexity 1 38 0 25 0 0 0 chr10 38573756 38573781 -101742984 + AT_rich Low_complexity Low_complexity 1 25 0 445 261 37 15 chr10 38574736 38574870 -101741895 - L2 LINE L2 0 3313 3177 686 247 61 96 chr10 38574954 38575024 -101741741 - L1MEc LINE L1 -4604 2221 2150 1116 184 18 0 chr10 38575024 38575247 -101741518 + L1MA8 LINE L1 6062 6288 -3 686 247 61 96 chr10 38575247 38575747 -101741018 - L1MEc LINE L1 -4675 2150 1671 228 240 27 13 chr10 38575775 38575850 -101740915 + (TA)n Simple_repeat Simple_repeat 2 77 0 273 127 127 73 chr10 38575916 38576026 -101740739 - L1M1 LINE L1 -5164 2401 2286 305 282 135 6 chr10 38576060 38576216 -101740549 - L1MEc LINE L1 -5327 1215 1040 606 288 25 0 chr10 38578199 38578359 -101738406 - MER5B DNA MER1_type 0 178 15 947 130 33 22 chr10 38578570 38578754 -101738011 + MER53 DNA DNA 4 189 0 232 136 15 15 chr10 38580412 38580478 -101736287 + T-rich Low_complexity Low_complexity 2 67 0 1798 176 24 12 chr10 38581298 38581638 -101735127 - MER2 DNA MER2_type 0 344 1 1425 248 48 36 chr10 38582743 38583219 -101733546 - MER74B LTR ERVL -82 540 59 389 266 47 30 chr10 38583623 38583792 -101732973 - L1ME3A LINE L1 -219 5951 5780 590 306 93 29 chr10 38584119 38584678 -101732087 - L1ME3A LINE L1 -860 5286 4692 2136 122 0 7 chr10 38584685 38584988 -101731777 - AluSq SINE Alu -12 301 1 224 57 0 29 chr10 38585038 38585073 -101731692 + (TCC)n Simple_repeat Simple_repeat 3 36 0 5240 152 31 44 chr10 38585253 38585357 -101731408 - L1PB1 LINE L1 -2 6149 6045 2823 0 0 0 chr10 38585357 38585663 -101731102 - AluYa5 SINE Alu -5 306 1 5240 152 31 44 chr10 38585663 38587569 -101729196 - L1PB1 LINE L1 -106 6045 4177 703 275 128 10 chr10 38587561 38588028 -101728737 + L1ME3A LINE L1 5401 5934 -255 * 204 111 0 0 chr10 38588905 38588941 -101727824 + (CA)n Simple_repeat Simple_repeat 1 36 0 338 0 24 0 chr10 38589404 38589446 -101727319 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 1915 132 21 0 chr10 38589449 38589729 -101727036 - AluSx SINE Alu -26 286 1 2299 67 7 0 chr10 38590933 38591217 -101725548 + AluY SINE Alu 6 291 -20 417 246 0 0 chr10 38591220 38591338 -101725427 + (TATATG)n Simple_repeat Simple_repeat 2 119 0 1773 193 22 14 chr10 38592528 38592896 -101723869 - L1PA16 LINE L1 -22 6144 5774 2087 98 0 4 chr10 38593128 38593405 -101723360 + AluY SINE Alu 1 276 -35 225 0 0 0 chr10 38593406 38593431 -101723334 + (TC)n Simple_repeat Simple_repeat 2 26 0 475 70 0 62 chr10 38593431 38593559 -101723206 + (TA)n Simple_repeat Simple_repeat 2 121 0 232 329 255 12 chr10 38594051 38594212 -101722553 + MIR SINE MIR 52 251 -11 243 338 0 0 chr10 38595433 38595504 -101721261 + MIR SINE MIR 115 185 -77 840 192 54 17 chr10 38595565 38595741 -101721024 - MIR SINE MIR -60 202 24 439 321 14 21 chr10 38595882 38596022 -101720743 + MIR3 SINE MIR 67 205 -3 206 321 127 0 chr10 38596064 38596198 -101720567 + L3b LINE CR1 1316 1466 -117 24 32 0 0 chr10 38597230 38597261 -101719504 + AT_rich Low_complexity Low_complexity 1 31 0 32 26 0 0 chr10 38598811 38598850 -101717915 + AT_rich Low_complexity Low_complexity 1 39 0 11734 140 27 13 chr10 38598860 38602042 -101714723 - L1MA1 LINE L1 0 7721 4493 6655 129 37 1 chr10 38602040 38603098 -101713667 - L1MA1 LINE L1 -4723 2842 1747 * 21 0 0 0 chr10 38603132 38603153 -101713612 + AT_rich Low_complexity Low_complexity 1 21 0 1386 118 80 38 chr10 38605857 38606095 -101710670 + Tigger2a DNA MER2_type 1 248 -186 864 271 24 0 chr10 38606488 38606698 -101710067 + MER58A DNA MER1_type 10 224 0 335 297 116 7 chr10 38607314 38607469 -101709296 + MIR SINE MIR 1 172 -90 3452 236 49 6 chr10 38609858 38610732 -101706033 + L1P LINE L1 1940 2851 -3295 2369 196 7 0 chr10 38610785 38611233 -101705532 + L1P LINE L1 3803 4253 -1893 258 288 12 0 chr10 38611234 38611314 -101705451 + L2 LINE L2 2527 2607 -707 217 329 205 48 chr10 38611421 38611792 -101704973 + L2 LINE L2 2867 3295 -18 1659 221 19 27 chr10 38612046 38612412 -101704353 - MLT1A2 LTR MaLR -11 363 1 242 344 48 40 chr10 38613111 38613236 -101703529 - MER5A DNA MER1_type -6 183 58 2082 129 0 3 chr10 38613577 38613879 -101702886 + AluSx SINE Alu 1 301 -11 360 323 40 25 chr10 38613905 38614196 -101702569 + L1ME LINE L1 2199 2457 -3758 2177 125 0 0 chr10 38614325 38614628 -101702137 - AluSq SINE Alu -10 303 1 2356 83 0 10 chr10 38614633 38614945 -101701820 - AluSg SINE Alu 0 310 2 2246 106 0 13 chr10 38616199 38616510 -101700255 - AluSx SINE Alu -5 307 1 287 265 173 33 chr10 38617635 38617971 -101698794 + L1ME LINE L1 5351 5733 -457 195 70 47 23 chr10 38618256 38618299 -101698466 + (TA)n Simple_repeat Simple_repeat 1 44 0 1043 213 7 79 chr10 38618299 38618391 -101698374 + MLT1B LTR MaLR 10 107 -283 1356 126 39 39 chr10 38618391 38618621 -101698144 - MER30 DNA MER1_type 0 230 1 1043 213 7 79 chr10 38618621 38618805 -101697960 + MLT1B LTR MaLR 107 266 -124 863 159 7 0 chr10 38618832 38618970 -101697795 + L1M4 LINE L1 5489 5627 -547 745 162 33 8 chr10 38618990 38619139 -101697626 + MLT1B LTR MaLR 275 389 -1 186 133 0 0 chr10 38619144 38619174 -101697591 + (TATG)n Simple_repeat Simple_repeat 2 31 0 1016 210 31 43 chr10 38619180 38619528 -101697237 - Tigger3(Golem) DNA MER2_type 0 3036 1 21 0 0 0 chr10 38619557 38619578 -101697187 + AT_rich Low_complexity Low_complexity 1 21 0 22 70 0 0 chr10 38619624 38619667 -101697098 + AT_rich Low_complexity Low_complexity 1 43 0 4623 191 21 19 chr10 38620770 38621835 -101694930 - L1MC2 LINE L1 -95 6249 5186 370 237 58 106 chr10 38621842 38622019 -101694746 - L1ME4a LINE L1 -2 6119 5964 1732 209 62 66 chr10 38622019 38622453 -101694312 + MLT1D LTR MaLR 5 438 -67 1859 183 0 0 chr10 38622453 38622765 -101694000 - AluJo SINE Alu 0 312 1 1732 209 62 66 chr10 38622765 38622833 -101693932 + MLT1D LTR MaLR 438 505 0 370 237 58 106 chr10 38622833 38622984 -101693781 - L1ME4a LINE L1 -157 5964 5807 2450 173 97 45 chr10 38623437 38623581 -101693184 + MLT1F1 LTR MaLR 1 136 -431 15750 33 7 2 chr10 38623581 38626278 -101690487 + L1PA4 LINE L1 3469 6155 0 2450 173 97 45 chr10 38626278 38626670 -101690095 + MLT1F1 LTR MaLR 136 565 -2 210 400 189 0 chr10 38627170 38627355 -101689410 + L2 LINE L2 2651 2870 -444 520 350 15 0 chr10 38627433 38627630 -101689135 + MIR SINE MIR 57 256 -6 237 366 117 25 chr10 38627657 38627938 -101688827 + L2 LINE L2 2966 3272 0 1517 177 0 0 chr10 38628113 38628350 -101688415 + AluJo SINE Alu 44 280 -32 689 273 67 38 chr10 38628389 38628704 -101688061 + HsTC2a DNA Tc2 1 324 -420 1094 304 112 22 chr10 38628719 38629100 -101687665 + L1MC4 LINE L1 7189 7535 -507 489 34 0 0 chr10 38629100 38629159 -101687606 + (CA)n Simple_repeat Simple_repeat 1 59 0 1094 304 112 22 chr10 38629159 38629539 -101687226 + L1MC4 LINE L1 7535 8018 -24 299 214 125 54 chr10 38629624 38629736 -101687029 + HsTC2a DNA Tc2 317 436 -306 1911 122 0 4 chr10 38629828 38630091 -101686674 - AluSc SINE Alu -47 262 1 406 206 237 10 chr10 38630172 38630254 -101686511 + HsTC2a DNA Tc2 502 564 -1334 251 53 0 26 chr10 38630254 38630292 -101686473 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 406 206 237 10 chr10 38630292 38630403 -101686362 + HsTC2a DNA Tc2 564 739 -3 366 325 6 18 chr10 38630935 38631101 -101685664 + (CATATA)n Simple_repeat Simple_repeat 4 167 0 1917 165 9 6 chr10 38631245 38631648 -101685117 - L1MA9 LINE L1 -697 5615 5212 3542 168 34 10 chr10 38631652 38632330 -101684435 + L1MA9 LINE L1 5619 6312 0 766 205 40 0 chr10 38634800 38634951 -101681814 + MER45A DNA AcHobo 1 157 -21 1195 243 31 6 chr10 38637000 38637325 -101679440 + L1MB4 LINE L1 4810 5142 -1004 2721 82 0 6 chr10 38637326 38637678 -101679087 - THE1A LTR MaLR 0 355 6 3849 180 16 49 chr10 38637678 38637915 -101678850 + L1MB4 LINE L1 5139 5382 -798 662 218 0 15 chr10 38637915 38638048 -101678717 + FLAM_A SINE Alu 1 131 -2 3849 180 16 49 chr10 38638048 38638771 -101677994 + L1MB4 LINE L1 5382 6068 -112 286 264 18 73 chr10 38640896 38641006 -101675759 - MIR SINE MIR -5 257 154 1223 245 162 35 chr10 38641011 38641492 -101675273 - MLT1H LTR MaLR -5 544 3 238 244 0 0 chr10 38641495 38641540 -101675225 - MIR SINE MIR -105 157 113 214 309 16 98 chr10 38642254 38642448 -101674317 + MIR SINE MIR 72 249 -13 362 243 53 66 chr10 38642859 38643011 -101673754 + L1MB8 LINE L1 6029 6178 0 291 140 0 0 chr10 38643047 38643097 -101673668 + (TC)n Simple_repeat Simple_repeat 1 50 0 1128 149 0 0 chr10 38643099 38643260 -101673505 - AluJb SINE Alu -15 297 137 21 82 0 0 chr10 38643652 38643701 -101673064 + AT_rich Low_complexity Low_complexity 1 49 0 413 299 8 0 chr10 38645350 38645467 -101671298 - MER94 DNA DNA 0 134 17 562 255 39 25 chr10 38645684 38645857 -101670908 + MIR SINE MIR 16 191 -69 517 277 106 43 chr10 38646064 38646346 -101670419 - MLT1L LTR MaLR -210 405 106 21 36 0 0 chr10 38646803 38646831 -101669934 + AT_rich Low_complexity Low_complexity 1 28 0 297 0 0 0 chr10 38647994 38648027 -101668738 + (T)n Simple_repeat Simple_repeat 1 33 0 203 283 98 22 chr10 38648459 38648551 -101668214 - MIR3 SINE MIR -5 203 105 182 389 0 0 chr10 38648782 38648854 -101667911 + L2 LINE L2 3187 3258 -14 407 278 71 114 chr10 38649318 38649573 -101667192 + MIR SINE MIR 10 253 -9 858 175 0 0 chr10 38651679 38651805 -101664960 + FLAM_C SINE Alu 1 126 -17 23 33 0 0 chr10 38651805 38651835 -101664930 + AT_rich Low_complexity Low_complexity 1 30 0 253 259 0 0 chr10 38652002 38652060 -101664705 - L2 LINE L2 0 3313 3256 471 206 62 0 chr10 38652453 38652550 -101664215 - MER5A DNA MER1_type -83 106 4 332 224 28 47 chr10 38652592 38652699 -101664066 + L1MC4 LINE L1 6598 6702 -1340 223 85 43 0 chr10 38652706 38652753 -101664012 + (TA)n Simple_repeat Simple_repeat 1 49 0 1009 280 91 26 chr10 38653130 38653626 -101663139 + L1MEd LINE L1 499 1026 -5093 582 313 14 10 chr10 38653916 38654124 -101662641 - MIR SINE MIR -13 249 41 250 329 112 0 chr10 38654727 38654870 -101661895 + L2 LINE L2 2543 2701 -613 5585 158 26 2 chr10 38654878 38655846 -101660919 - L1MC1 LINE L1 -5 6328 5338 430 326 139 0 chr10 38655864 38656079 -101660686 + L2 LINE L2 2691 2935 -379 263 268 113 52 chr10 38656088 38656185 -101660580 - MER96 DNA MER1_type? -24 151 49 445 187 121 0 chr10 38656186 38656277 -101660488 + MER96 DNA MER1_type? 25 126 -49 559 79 13 0 chr10 38656277 38656353 -101660412 + MADE1 DNA Mariner 1 77 -3 243 183 0 0 chr10 38657220 38657267 -101659498 + (TG)n Simple_repeat Simple_repeat 2 51 -10 3992 174 63 19 chr10 38657267 38658094 -101658671 - MER21B LTR ERV1 0 863 1 243 183 0 0 chr10 38658094 38658106 -101658659 + (TG)n Simple_repeat Simple_repeat 50 61 0 439 125 0 0 chr10 38658188 38658252 -101658513 + AluS SINE Alu 1 64 -248 4354 91 0 13 chr10 38658254 38658879 -101657886 + L1P LINE L1 4655 5271 -875 1804 215 94 20 chr10 38658879 38659335 -101657430 + LTR2B LTR ERV1 1 490 0 6815 60 10 0 chr10 38659335 38660205 -101656560 + L1PA7 LINE L1 5268 6146 -8 1914 205 29 25 chr10 38660310 38660637 -101656128 - L1MD2 LINE L1 -8 6351 6020 1944 205 32 52 chr10 38660637 38661194 -101655571 - LTR55 LTR ERV -2 546 1 1914 205 29 25 chr10 38661194 38661310 -101655455 - L1MD2 LINE L1 -339 6020 5906 1016 189 16 21 chr10 38661313 38661504 -101655261 - AluJo SINE Alu -36 276 87 2026 211 14 50 chr10 38661507 38661727 -101655038 - L1MD2 LINE L1 -337 5905 5679 2227 106 3 0 chr10 38661727 38662028 -101654737 + AluY SINE Alu 1 302 -9 2026 211 14 50 chr10 38662028 38662290 -101654475 - L1MD2 LINE L1 -563 5679 5440 7921 216 47 38 chr10 38662305 38663520 -101653245 - L1MC1 LINE L1 -6 6327 5124 1540 92 10 10 chr10 38663520 38663727 -101653038 + AluSc SINE Alu 84 290 -19 7921 216 47 38 chr10 38663727 38664323 -101652442 - L1MC1 LINE L1 -1209 5124 4535 2302 98 3 0 chr10 38664323 38664629 -101652136 - AluSg SINE Alu -3 307 1 7921 216 47 38 chr10 38664629 38666584 -101650181 - L1MC1 LINE L1 -1798 4535 2530 242 56 28 0 chr10 38667505 38667541 -101649224 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2017 101 0 35 chr10 38667544 38667831 -101648934 - AluSc SINE Alu -32 277 1 194 418 0 0 chr10 38668225 38668292 -101648473 - L2 LINE L2 -73 3199 3133 214 364 131 30 chr10 38668501 38669026 -101647739 - L2 LINE L2 -389 2925 2348 201 147 0 0 chr10 38669316 38669350 -101647415 + (TTTTC)n Simple_repeat Simple_repeat 5 38 0 204 182 0 102 chr10 38669364 38669452 -101647313 + T-rich Low_complexity Low_complexity 4 82 0 370 295 33 87 chr10 38670107 38670348 -101646417 + MIR SINE MIR 35 262 0 325 317 137 0 chr10 38670338 38670521 -101646244 - MIR SINE MIR -6 256 49 * 250 241 58 35 chr10 38671395 38671482 -101645283 + MIR SINE MIR 23 111 -151 807 122 0 0 chr10 38671499 38671614 -101645151 - AluSx SINE Alu -2 308 194 1095 95 0 7 chr10 38671615 38671762 -101645003 - AluSx SINE Alu -166 146 1 266 253 63 0 chr10 38672546 38672625 -101644140 + MER58 DNA MER1_type 7 90 -2330 1632 93 9 0 chr10 38673724 38673940 -101642825 - AluSp SINE Alu -12 301 84 222 338 133 27 chr10 38675025 38675288 -101641477 + L2 LINE L2 2497 2787 -527 261 318 62 82 chr10 38675451 38675806 -101640959 + L2 LINE L2 2923 3270 -2 554 239 210 0 chr10 38676122 38676289 -101640476 + L2 LINE L2 3111 3312 -1 22 35 0 0 chr10 38676392 38676421 -101640344 + AT_rich Low_complexity Low_complexity 1 29 0 1916 113 0 77 chr10 38676474 38676785 -101639980 - AluY SINE Alu -24 287 1 264 270 61 35 chr10 38677036 38677151 -101639614 - LTR33 LTR ERVL 0 521 404 332 347 56 7 chr10 38677165 38677309 -101639456 + MIR SINE MIR 2 152 -110 318 267 48 9 chr10 38677414 38677519 -101639246 + MIR SINE MIR 148 256 -6 218 250 0 18 chr10 38677524 38677580 -101639185 + (TTA)n Simple_repeat Simple_repeat 2 56 0 1653 312 50 17 chr10 38677608 38678695 -101638070 - L1 LINE L1 -1717 4429 3280 313 48 0 0 chr10 38678697 38678739 -101638026 - AluSp/q SINE Alu -10 293 252 284 285 108 38 chr10 38678765 38678923 -101637842 - MLT1C LTR MaLR -79 388 220 21 0 0 0 chr10 38679243 38679264 -101637501 + AT_rich Low_complexity Low_complexity 1 21 0 2102 78 7 18 chr10 38679506 38679810 -101636955 - AluY SINE Alu 0 301 1 2193 120 3 0 chr10 38680124 38680432 -101636333 - AluSp SINE Alu -4 309 1 371 288 81 54 chr10 38680556 38680851 -101635914 - L1MEc LINE L1 -910 1580 1286 578 209 0 0 chr10 38680865 38680970 -101635795 - FLAM_A SINE Alu -13 129 25 412 329 20 14 chr10 38681076 38681222 -101635543 - L1MEc LINE L1 -5031 1088 942 274 206 59 10 chr10 38681233 38681335 -101635430 + (TA)n Simple_repeat Simple_repeat 2 108 0 263 214 54 0 chr10 38681390 38681446 -101635319 - MLT1G1 LTR MaLR -72 523 465 608 269 68 29 chr10 38681454 38681724 -101635041 - MLT1G1 LTR MaLR -279 316 11 437 387 29 40 chr10 38683276 38683625 -101633140 + L2 LINE L2 2435 2779 -535 182 292 125 61 chr10 38683936 38684081 -101632684 - MIR3 SINE MIR -50 158 4 793 305 45 27 chr10 38684131 38684454 -101632311 - LTR16A LTR ERVL 0 457 127 412 270 40 31 chr10 38684894 38685116 -101631649 - L1MEc LINE L1 -4646 1750 1527 257 294 20 20 chr10 38685124 38685226 -101631539 - LTR16A LTR ERVL -318 132 31 1326 190 3 100 chr10 38686390 38686721 -101630044 + AluJo SINE Alu 1 299 -13 279 331 73 20 chr10 38687355 38687506 -101629259 + L2 LINE L2 2926 3084 -188 285 285 132 28 chr10 38687847 38687991 -101628774 + MIR3 SINE MIR 34 192 -16 2129 99 9 49 chr10 38688427 38688809 -101627956 - AluSx SINE Alu 0 369 1 21 36 0 0 chr10 38688858 38688886 -101627879 + AT_rich Low_complexity Low_complexity 1 28 0 279 236 27 27 chr10 38689004 38689114 -101627651 + CT-rich Low_complexity Low_complexity 3 112 0 483 368 53 10 chr10 38689854 38690158 -101626607 - L1MC4a LINE L1 -1906 5902 5586 3432 254 83 36 chr10 38690158 38692899 -101623866 + L1MB1 LINE L1 6 2277 -3693 284 219 14 14 chr10 38692922 38692995 -101623770 + Tigger5 DNA MER2_type 2251 2323 0 397 219 12 0 chr10 38693050 38693132 -101623633 + Tigger5 DNA MER2_type 2238 2320 -3 9988 203 49 53 chr10 38693133 38693713 -101623052 + L1MB1 LINE L1 2272 2853 -3139 666 235 0 0 chr10 38693713 38693828 -101622937 + FLAM_A SINE Alu 5 119 -14 522 31 0 0 chr10 38693828 38693892 -101622873 + (CA)n Simple_repeat Simple_repeat 2 65 0 9988 203 49 53 chr10 38693892 38694468 -101622297 + L1MB1 LINE L1 2852 3429 -2563 2202 55 7 58 chr10 38694468 38694777 -101621988 + AluY SINE Alu 1 293 -18 9988 203 49 53 chr10 38694777 38694938 -101621827 + L1MB1 LINE L1 3429 3589 -2403 2656 93 8 8 chr10 38694938 38695313 -101621452 - THE1C LTR MaLR 0 375 1 9988 203 49 53 chr10 38695313 38695892 -101620873 + L1MB1 LINE L1 3589 4169 -1823 444 84 127 0 chr10 38695892 38695963 -101620802 - MADE1 DNA Mariner 0 80 1 9988 203 49 53 chr10 38695963 38697083 -101619682 + L1MB1 LINE L1 4169 5268 -724 368 132 0 38 chr10 38697083 38697189 -101619576 + (TTATA)n Simple_repeat Simple_repeat 5 106 0 3677 162 23 4 chr10 38697207 38697944 -101618821 + L1MB1 LINE L1 5267 6016 0 827 153 8 0 chr10 38699882 38700013 -101616752 + FLAM_A SINE Alu 1 132 -1 731 246 18 1 chr10 38700160 38700212 -101616553 + MER58 DNA MER1_type 1 51 -2369 203 0 0 36 chr10 38700212 38700240 -101616525 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 731 246 18 1 chr10 38700240 38700480 -101616285 + MER58 DNA MER1_type 51 2418 -2 4769 187 80 62 chr10 38700917 38702039 -101614726 + Charlie1a DNA MER1_type 7 1160 -1601 1838 70 0 0 chr10 38702039 38702268 -101614497 + AluY SINE Alu 1 229 -82 4769 187 80 62 chr10 38702268 38702520 -101614245 + Charlie1a DNA MER1_type 1160 1406 -49 4522 150 11 5 chr10 38702526 38704059 -101612706 - L1PA13 LINE L1 -2 6161 4536 7753 156 12 3 chr10 38704059 38704638 -101612127 + L1P LINE L1 3107 3679 -2467 210 71 0 0 chr10 38704638 38704666 -101612099 + (CAA)n Simple_repeat Simple_repeat 3 30 0 7753 156 12 3 chr10 38704666 38705463 -101611302 + L1P LINE L1 3679 4489 -1657 1084 77 0 0 chr10 38705719 38705874 -101610891 + L1PB4 LINE L1 4357 4511 -1635 5243 132 23 0 chr10 38705885 38705897 -101610868 + L1PB4 LINE L1 5176 5186 -970 2305 116 0 0 chr10 38705897 38706199 -101610566 + AluSg SINE Alu 1 302 -8 5243 132 23 0 chr10 38706199 38707149 -101609616 + L1PB4 LINE L1 5186 6155 -1 1097 160 11 0 chr10 38707542 38707723 -101609042 + AluSg/x SINE Alu 129 311 -1 21 36 0 0 chr10 38708270 38708298 -101608467 + AT_rich Low_complexity Low_complexity 1 28 0 23 54 0 0 chr10 38709594 38709631 -101607134 + AT_rich Low_complexity Low_complexity 1 37 0 266 148 19 0 chr10 38710124 38710178 -101606587 + CT-rich Low_complexity Low_complexity 1 55 0 * 674 210 0 22 chr10 38710172 38710353 -101606412 + C-rich Low_complexity Low_complexity 2 178 0 24 67 0 0 chr10 38710598 38710643 -101606122 + AT_rich Low_complexity Low_complexity 1 45 0 216 67 0 0 chr10 38711265 38711295 -101605470 + (GA)n Simple_repeat Simple_repeat 2 31 0 335 305 11 0 chr10 38712348 38712443 -101604322 - MIR SINE MIR -147 115 20 2368 94 3 0 chr10 38712470 38712778 -101603987 - AluSp SINE Alu -4 309 1 437 319 62 0 chr10 38713414 38713640 -101603125 - HAL1 LINE L1 -856 1651 1412 217 366 93 21 chr10 38714032 38714549 -101602216 + L2 LINE L2 1260 1813 -1501 237 111 61 30 chr10 38714549 38714648 -101602117 + (TA)n Simple_repeat Simple_repeat 1 102 0 499 312 80 35 chr10 38714674 38715049 -101601716 - L1MC4a LINE L1 -1916 5892 5501 746 320 86 46 chr10 38715064 38715777 -101600988 + L2 LINE L2 2033 2773 -541 419 375 113 17 chr10 38715857 38716148 -101600617 + L2 LINE L2 2936 3254 -18 331 299 42 24 chr10 38716717 38716884 -101599881 - MIR SINE MIR -56 206 37 845 289 22 4 chr10 38717386 38717614 -101599151 + MIR SINE MIR 3 234 -28 1563 137 50 8 chr10 38717665 38717927 -101598838 + MER46B DNA MER2_type 1 148 -88 1929 184 9 0 chr10 38717931 38718273 -101598492 + MER7A DNA MER2_type 2 344 -2 288 170 0 0 chr10 38718279 38718332 -101598433 + (CA)n Simple_repeat Simple_repeat 2 54 0 555 211 18 0 chr10 38718336 38718450 -101598315 + Tigger3(Golem) DNA MER2_type 2911 3026 -3 474 113 75 0 chr10 38718453 38718533 -101598232 + MER46B DNA MER2_type 151 236 0 305 238 200 0 chr10 38720207 38720287 -101596478 + MER5A DNA MER1_type 17 112 -77 315 169 31 31 chr10 38720318 38720383 -101596382 + L2 LINE L2 3238 3302 -11 21 0 0 0 chr10 38721426 38721447 -101595318 + AT_rich Low_complexity Low_complexity 1 21 0 2207 116 0 0 chr10 38721525 38721818 -101594947 + AluSp SINE Alu 1 293 -20 2468 181 3 4 chr10 38721913 38722447 -101594318 - L1P LINE L1 -733 5428 4895 4704 124 6 11 chr10 38722448 38723174 -101593591 + L1PA15 LINE L1 5438 6159 -6 760 188 117 132 chr10 38723179 38723588 -101593177 - MER57A LTR ERV1 0 403 1 27 29 0 0 chr10 38723881 38723915 -101592850 + AT_rich Low_complexity Low_complexity 1 34 0 1403 179 33 100 chr10 38724227 38724618 -101592147 + MLT1A1 LTR MaLR 1 365 0 450 336 26 39 chr10 38724631 38724863 -101591902 - MIR SINE MIR -12 250 22 222 380 94 69 chr10 38725066 38725384 -101591381 - L2 LINE L2 -10 3262 2937 1006 223 18 108 chr10 38725830 38726229 -101590536 - MLT1A1 LTR MaLR 0 365 3 24 53 0 0 chr10 38726309 38726347 -101590418 + AT_rich Low_complexity Low_complexity 1 38 0 434 328 78 15 chr10 38726347 38726551 -101590214 - MIR SINE MIR 0 262 46 484 42 14 14 chr10 38728655 38728727 -101588038 + (TCTA)n Simple_repeat Simple_repeat 3 74 0 300 288 8 34 chr10 38729024 38729142 -101587623 + HAL1 LINE L1 9 123 -2384 376 342 74 10 chr10 38729731 38729933 -101586832 + HAL1 LINE L1 738 952 -1555 315 161 0 0 chr10 38729935 38729991 -101586774 + GA-rich Low_complexity Low_complexity 1 56 0 1263 173 79 0 chr10 38730021 38730275 -101586490 - L1M3 LINE L1 -538 5630 5357 1016 292 81 29 chr10 38730356 38730949 -101585816 + HAL1 LINE L1 1087 1710 -797 317 234 122 20 chr10 38730954 38731151 -101585614 + L1ME2 LINE L1 2983 3199 -2947 22 70 0 0 chr10 38731200 38731243 -101585522 + AT_rich Low_complexity Low_complexity 1 43 0 308 230 20 30 chr10 38731316 38731416 -101585349 + L1ME2 LINE L1 3442 3540 -2606 496 274 147 81 chr10 38731492 38731927 -101584838 - MLT1H1 LTR MaLR 0 550 86 3734 252 86 22 chr10 38731999 38734285 -101582480 + L1ME2 LINE L1 3656 6079 -85 524 263 121 42 chr10 38734414 38734754 -101582011 + MLT1G LTR MaLR 180 584 -6 238 162 0 0 chr10 38735537 38735574 -101581191 + Alu SINE Alu 84 120 -182 2331 135 0 0 chr10 38737069 38737409 -101579356 + L1PA8A LINE L1 4 343 -5532 7281 114 20 2 chr10 38737409 38739262 -101577503 + L1PA8A LINE L1 4553 6426 -20 216 0 0 0 chr10 38739262 38739286 -101577479 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7281 114 20 2 chr10 38739286 38739308 -101577457 + L1PA8A LINE L1 6426 6446 0 545 271 39 30 chr10 38739501 38739704 -101577061 - MIR SINE MIR -5 257 53 610 193 6 28 chr10 38739954 38740135 -101576630 + GA-rich Low_complexity Low_complexity 3 179 0 23 33 0 0 chr10 38741211 38741241 -101575524 + AT_rich Low_complexity Low_complexity 1 30 0 2042 78 88 7 chr10 38745112 38745395 -101571370 + AluY SINE Alu 1 306 -5 22 0 0 0 chr10 38747287 38747309 -101569456 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr10 38747860 38747891 -101568874 + AT_rich Low_complexity Low_complexity 1 31 0 2108 200 21 34 chr10 38748006 38748537 -101568228 - L1MA8 LINE L1 -22 7688 7165 * 2260 147 50 28 chr10 38748505 38748969 -101567796 - L1MA8 LINE L1 -935 6630 6157 * 2287 230 58 34 chr10 38748966 38749257 -101567508 - L1MA8 LINE L1 -3710 3855 3573 1471 124 0 0 chr10 38749257 38749458 -101567307 - AluSg/x SINE Alu -19 293 93 2287 230 58 34 chr10 38749458 38750209 -101566556 - L1MA8 LINE L1 -3992 3573 2781 415 288 22 0 chr10 38750212 38750362 -101566403 - L1M3d LINE L1 -4518 2509 2357 * 16102 160 25 28 chr10 38750359 38753798 -101562967 - L1MA3 LINE L1 -4 7720 4272 1994 98 4 7 chr10 38753798 38754072 -101562693 - AluSc SINE Alu -36 273 1 16102 160 25 28 chr10 38754072 38755279 -101561486 - L1MA3 LINE L1 -3452 4272 3063 2206 120 0 3 chr10 38755279 38755579 -101561186 + AluSx SINE Alu 3 301 -11 16102 160 25 28 chr10 38755579 38756507 -101560258 - L1MA3 LINE L1 -4661 3063 2134 3487 139 40 11 chr10 38756507 38757134 -101559631 - L1MA4 LINE L1 -3 6297 5653 4158 37 0 0 chr10 38757135 38757627 -101559138 - L1PA3 LINE L1 -1 6154 5663 16102 160 25 28 chr10 38757627 38758072 -101558693 - L1MA3 LINE L1 -5590 2134 1689 186 43 0 0 chr10 38758072 38758095 -101558670 + (TC)n Simple_repeat Simple_repeat 2 24 0 16102 160 25 28 chr10 38758095 38759767 -101556998 - L1MA3 LINE L1 -6035 1689 14 973 242 25 12 chr10 38759790 38760140 -101556625 - L1M3d LINE L1 -4828 2209 1844 1534 261 32 50 chr10 38760224 38760809 -101555956 - L1M3d LINE L1 -6449 581 7 705 232 163 11 chr10 38761851 38762041 -101554724 - MER58A DNA MER1_type -5 219 1 206 277 40 59 chr10 38762130 38762231 -101554534 - MIR SINE MIR 0 262 164 2172 124 19 35 chr10 38762275 38762645 -101554120 - THE1B LTR MaLR 0 364 1 1123 221 43 50 chr10 38762676 38762979 -101553786 - AluJo SINE Alu -1 301 1 1648 168 10 49 chr10 38763173 38763477 -101553288 + AluJb SINE Alu 1 292 -20 21 0 0 0 chr10 38764070 38764091 -101552674 + AT_rich Low_complexity Low_complexity 1 21 0 236 263 105 0 chr10 38767437 38767513 -101549252 - L2 LINE L2 -2 3270 3187 198 0 0 0 chr10 38767679 38767701 -101549064 + (TG)n Simple_repeat Simple_repeat 2 23 0 24 0 0 0 chr10 38768752 38768776 -101547989 + AT_rich Low_complexity Low_complexity 1 24 0 790 332 84 17 chr10 38769095 38769626 -101547139 - L2 LINE L2 0 3313 2749 562 299 49 0 chr10 38769649 38769813 -101546952 - MER58A DNA MER1_type -12 212 41 311 299 39 24 chr10 38769819 38769946 -101546819 + L1M3c LINE L1 176 304 -6009 2162 237 45 78 chr10 38770273 38770941 -101545824 + L1M3c LINE L1 803 1301 -5034 2130 110 10 10 chr10 38770941 38771242 -101545523 + AluSq SINE Alu 1 301 -12 2162 237 45 78 chr10 38771242 38771721 -101545044 + L1M3c LINE L1 1301 1794 -4541 352 240 0 1 chr10 38771737 38771830 -101544935 - MER33 DNA MER1_type -250 74 1 254 363 67 7 chr10 38772030 38772165 -101544600 - MIR SINE MIR -119 143 1 4578 219 56 32 chr10 38772195 38773617 -101543148 + Charlie1a DNA MER1_type 1 1455 0 194 383 12 0 chr10 38774025 38774106 -101542659 - L2 LINE L2 -5 3267 3186 23 33 0 0 chr10 38775157 38775187 -101541578 + AT_rich Low_complexity Low_complexity 1 30 0 286 302 107 39 chr10 38776684 38776825 -101539940 + MIR3 SINE MIR 79 205 -3 249 33 0 0 chr10 38777373 38777403 -101539362 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 1472 173 44 4 chr10 38777406 38777654 -101539111 - AluJo SINE Alu -31 281 24 252 86 0 0 chr10 38777702 38777737 -101539028 + (TG)n Simple_repeat Simple_repeat 2 36 0 205 284 25 25 chr10 38777755 38777836 -101538929 - MIR SINE MIR -136 126 46 265 279 85 79 chr10 38778226 38778391 -101538374 + L2 LINE L2 1731 1896 -1418 396 243 229 9 chr10 38778551 38778769 -101537996 - MLT1I LTR MaLR -52 357 92 512 198 10 0 chr10 38779227 38779328 -101537437 + MIR SINE MIR 124 225 -37 23 54 0 0 chr10 38779414 38779451 -101537314 + AT_rich Low_complexity Low_complexity 1 37 0 390 333 47 12 chr10 38779519 38779690 -101537075 - MIR3 SINE MIR -11 197 21 7503 28 0 9 chr10 38780655 38782320 -101534445 + L1PA3 LINE L1 4485 6140 -15 231 36 0 0 chr10 38782323 38782351 -101534414 + (TAA)n Simple_repeat Simple_repeat 3 30 0 912 250 119 81 chr10 38783214 38783734 -101533031 + MLT1F LTR MaLR 1 540 -2 21 0 0 0 chr10 38783740 38783761 -101533004 + AT_rich Low_complexity Low_complexity 1 21 0 195 69 0 0 chr10 38783936 38783965 -101532800 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 2448 64 0 3 chr10 38784239 38784535 -101532230 - AluY SINE Alu -16 295 1 272 172 17 0 chr10 38784564 38784622 -101532143 + (TATG)n Simple_repeat Simple_repeat 2 60 0 317 215 0 76 chr10 38784700 38784779 -101531986 + Tigger3(Golem) DNA MER2_type 9 81 -2948 299 95 0 0 chr10 38784828 38784870 -101531895 - AluSg/x SINE Alu -127 175 134 2276 70 0 20 chr10 38784870 38785172 -101531593 - AluY SINE Alu -15 296 1 1436 116 71 22 chr10 38785176 38785443 -101531322 + Tigger3(Golem) DNA MER2_type 2749 3028 -1 243 0 0 0 chr10 38786323 38786350 -101530415 + (TG)n Simple_repeat Simple_repeat 2 28 0 319 324 22 15 chr10 38786384 38786520 -101530245 - LTR16A LTR ERVL -53 397 261 477 171 0 11 chr10 38786555 38786643 -101530122 - L1MCa LINE L1 -5762 664 578 2128 229 53 43 chr10 38786708 38787250 -101529515 - L1MCa LINE L1 -5786 640 90 2493 68 7 0 chr10 38787250 38787559 -101529206 - AluY SINE Alu 0 311 1 2128 229 53 43 chr10 38787559 38787615 -101529150 - L1MCa LINE L1 -6336 90 36 1981 193 0 48 chr10 38787739 38788154 -101528611 + MSTD LTR MaLR 1 395 -1 801 368 28 0 chr10 38788223 38788688 -101528077 - HERV16 LTR ERVL -3604 1392 915 458 361 72 13 chr10 38788827 38789132 -101527633 - HERV16 LTR ERVL -4339 657 335 2328 99 0 10 chr10 38789314 38789618 -101527147 + AluY SINE Alu 1 301 -10 731 287 116 59 chr10 38789778 38790182 -101526583 + LTR16A LTR ERVL 1 427 -30 257 275 75 44 chr10 38790200 38790360 -101526405 - LTR16A1 LTR ERVL -48 409 245 2220 116 0 13 chr10 38790505 38790816 -101525949 - AluSx SINE Alu 0 312 6 503 214 15 53 chr10 38791007 38791213 -101525552 - L1P LINE L1 -2893 3253 3056 2126 230 20 36 chr10 38791287 38791927 -101524838 - L1P LINE L1 -3073 3073 2444 2156 122 0 3 chr10 38792614 38792908 -101523857 - AluSg SINE Alu -17 293 1 835 269 72 54 chr10 38792920 38793336 -101523429 - L1MEc LINE L1 -4543 1853 1446 1898 151 34 0 chr10 38793336 38793458 -101523307 + AluSx SINE Alu 1 117 -195 387 0 0 0 chr10 38793458 38793501 -101523264 + (CA)n Simple_repeat Simple_repeat 2 44 0 1898 151 34 0 chr10 38793501 38793670 -101523095 + AluSx SINE Alu 117 302 -10 835 269 72 54 chr10 38793670 38794210 -101522555 - L1MEc LINE L1 -4950 1446 880 1595 114 160 8 chr10 38794431 38794693 -101522072 + AluSg1 SINE Alu 1 302 -7 320 326 42 26 chr10 38794888 38795081 -101521684 - L1MEc LINE L1 -6061 335 140 39 60 0 0 chr10 38795294 38795361 -101521404 + AT_rich Low_complexity Low_complexity 1 67 0 1507 18 0 0 chr10 38795406 38795573 -101521192 - AluYb8 SINE Alu -5 313 147 919 184 70 66 chr10 38795574 38795802 -101520963 - AluJo SINE Alu -66 246 18 5308 128 11 8 chr10 38796060 38796971 -101519794 - L1MA2 LINE L1 -97 6207 5294 948 181 5 51 chr10 38796969 38797185 -101519580 - L1MA2 LINE L1 -1977 4169 3964 * 1597 236 8 21 chr10 38797183 38797667 -101519098 - L1P LINE L1 -3699 2447 1970 2859 125 45 0 chr10 38797675 38798146 -101518619 + L1PA15 LINE L1 5672 6163 -2 1785 143 38 58 chr10 38798272 38798637 -101518128 + MLT2D LTR ERVL 1 358 -56 198 71 0 0 chr10 38798650 38798678 -101518087 + (TCTCTG)n Simple_repeat Simple_repeat 3 30 0 291 71 0 0 chr10 38798678 38798720 -101518045 + (TG)n Simple_repeat Simple_repeat 1 42 0 346 282 107 0 chr10 38798723 38798826 -101517939 - L1MCa LINE L1 -5020 1406 1293 2117 102 32 11 chr10 38798864 38799149 -101517616 - AluY SINE Alu -20 291 1 282 95 0 0 chr10 38799198 38799240 -101517525 - U3 snRNA snRNA -175 42 1 484 329 43 30 chr10 38799387 38799715 -101517050 + L1ME3A LINE L1 1905 2236 -4160 566 263 44 10 chr10 38799720 38800017 -101516748 + L1ME3A LINE L1 2340 2646 -3569 701 331 68 27 chr10 38800021 38800434 -101516331 + L1ME3A LINE L1 5576 6023 -216 2274 93 3 13 chr10 38800434 38800735 -101516030 - AluSg SINE Alu -12 298 1 701 331 68 27 chr10 38800735 38800922 -101515843 + L1ME3A LINE L1 6023 6201 -38 2176 123 0 0 chr10 38801652 38801945 -101514820 - AluSx SINE Alu -16 296 4 2260 87 42 0 chr10 38801986 38802275 -101514490 - AluY SINE Alu -10 301 1 315 0 0 0 chr10 38803770 38803805 -101512960 + (CA)n Simple_repeat Simple_repeat 1 35 0 203 379 0 39 chr10 38804049 38804152 -101512613 - MIR3 SINE MIR -96 112 14 2275 176 69 5 chr10 38806756 38807189 -101509576 + LOR1b LTR ERV1 1 461 0 257 276 120 28 chr10 38807372 38807698 -101509067 - L1ME4a LINE L1 -110 6011 5656 394 304 77 28 chr10 38807819 38808000 -101508765 - MIR SINE MIR -11 251 62 1249 230 124 65 chr10 38808039 38808509 -101508256 + MER20B DNA MER1_type 44 570 -213 778 164 0 8 chr10 38808509 38808643 -101508122 + FLAM_C SINE Alu 1 133 0 1249 230 124 65 chr10 38808643 38808863 -101507902 + MER20B DNA MER1_type 570 775 -8 320 218 11 0 chr10 38809081 38809168 -101507597 + (GAATG)n Simple_repeat Simple_repeat 3 90 0 1696 159 75 3 chr10 38809477 38809811 -101506954 + MLT1A1 LTR MaLR 8 365 0 26 0 0 0 chr10 38810441 38810467 -101506298 + AT_rich Low_complexity Low_complexity 1 26 0 1149 223 100 47 chr10 38811202 38811766 -101504999 - L1ME2 LINE L1 -21 6212 5558 2339 100 3 0 chr10 38811766 38812065 -101504700 - AluSp SINE Alu -13 300 1 1149 223 100 47 chr10 38812065 38812090 -101504675 - L1ME2 LINE L1 -675 5558 5536 740 129 8 16 chr10 38812098 38812222 -101504543 + AluY SINE Alu 175 297 -14 1631 253 67 41 chr10 38812248 38812671 -101504094 - L1ME2 LINE L1 -3289 2926 2515 2395 65 0 3 chr10 38812671 38812963 -101503802 - AluY SINE Alu -20 291 1 1631 253 67 41 chr10 38812963 38813347 -101503418 - L1ME2 LINE L1 -3700 2515 2122 354 45 0 0 chr10 38813347 38813391 -101503374 + (TG)n Simple_repeat Simple_repeat 2 45 0 1631 253 67 41 chr10 38813391 38813606 -101503159 - L1ME2 LINE L1 -4093 2122 1914 261 0 0 0 chr10 38815641 38815670 -101501095 + (G)n Simple_repeat Simple_repeat 1 29 0 6164 71 0 0 chr10 38816131 38817206 -101499559 - L1PA5 LINE L1 -18 6136 5034 241 359 8 38 chr10 38817215 38817346 -101499419 + L2 LINE L2 2620 2746 -568 2280 85 0 31 chr10 38819454 38819772 -101496993 + AluY SINE Alu 1 308 -3 2348 62 7 10 chr10 38819779 38820087 -101496678 + AluY SINE Alu 1 307 -4 1699 191 24 0 chr10 38820328 38820621 -101496144 + AluJo SINE Alu 1 300 -12 234 150 0 0 chr10 38820890 38820930 -101495835 + (TA)n Simple_repeat Simple_repeat 2 41 0 203 182 55 0 chr10 38820977 38821032 -101495733 + (TA)n Simple_repeat Simple_repeat 1 58 0 330 113 0 0 chr10 38821169 38821231 -101495534 - L1MA7 LINE L1 -1 6290 6229 4284 243 69 55 chr10 38821231 38823320 -101493445 - L1 LINE L1 -2498 3536 1478 1742 123 97 8 chr10 38823320 38823588 -101493177 - AluSg SINE Alu -18 292 1 4284 243 69 55 chr10 38823588 38824095 -101492670 - L1 LINE L1 -4556 1478 980 1035 241 91 19 chr10 38824095 38824415 -101492350 - MER2 DNA MER2_type 0 344 2 4284 243 69 55 chr10 38824415 38825327 -101491438 - L1 LINE L1 -5054 980 359 250 310 151 26 chr10 38825577 38825848 -101490917 - L1M3a LINE L1 -5256 699 395 1159 315 10 12 chr10 38825939 38826352 -101490413 - L1M3a LINE L1 -5532 423 12 362 321 50 9 chr10 38826367 38826585 -101490180 - L1ME LINE L1 -5167 903 677 253 335 129 20 chr10 38826649 38826897 -101489868 + MLT1H LTR MaLR 38 312 -237 2265 43 7 4 chr10 38827147 38827463 -101489302 - AluY SINE Alu 0 317 1 192 97 0 0 chr10 38827865 38827896 -101488869 + (T)n Simple_repeat Simple_repeat 1 31 0 1849 183 21 3 chr10 38828136 38828524 -101488241 - L1MA6 LINE L1 0 6300 5906 2177 221 85 48 chr10 38828637 38829297 -101487468 + MLT1A1-int LTR MaLR 1052 1735 0 1592 221 22 3 chr10 38829297 38829655 -101487110 + MLT1A1 LTR MaLR 1 365 0 25 0 0 0 chr10 38830461 38830486 -101486279 + AT_rich Low_complexity Low_complexity 1 25 0 2358 79 3 7 chr10 38830990 38831294 -101485471 + AluY SINE Alu 1 303 -8 1377 272 10 36 chr10 38831852 38832345 -101484420 + L1ME1 LINE L1 5678 6157 -9 375 323 70 0 chr10 38832878 38833036 -101483729 - MIR SINE MIR -63 199 31 238 331 149 8 chr10 38833154 38833275 -101483490 - MIR3 SINE MIR -67 141 4 54 49 0 0 chr10 38834045 38834127 -101482638 + AT_rich Low_complexity Low_complexity 1 82 0 2300 84 0 3 chr10 38834635 38834931 -101481834 + AluSq SINE Alu 1 295 -18 381 303 133 0 chr10 38835582 38835747 -101481018 - MIR SINE MIR -27 235 49 209 229 21 0 chr10 38836115 38836163 -101480602 + L2 LINE L2 3223 3271 -1 22 0 0 0 chr10 38836633 38836655 -101480110 + AT_rich Low_complexity Low_complexity 1 22 0 495 209 127 0 chr10 38837641 38837751 -101479014 + FLAM_A SINE Alu 1 124 -9 281 430 36 0 chr10 38837768 38837961 -101478804 - L2 LINE L2 -584 2730 2531 2559 193 12 26 chr10 38837965 38838141 -101478624 + L1MB8 LINE L1 4966 5143 -1035 2331 67 40 3 chr10 38838141 38838439 -101478326 + AluY SINE Alu 1 309 -2 2559 193 12 26 chr10 38838439 38839087 -101477678 + L1MB8 LINE L1 5143 5773 -405 1350 110 0 0 chr10 38839101 38839283 -101477482 - AluSq SINE Alu -10 303 122 2176 111 0 7 chr10 38839286 38839593 -101477172 - AluY SINE Alu -5 306 2 1778 147 25 50 chr10 38839594 38839990 -101476775 + L1MB8 LINE L1 5788 6173 -5 2154 104 0 17 chr10 38840587 38840886 -101475879 + AluSq SINE Alu 1 294 -19 2417 28 41 0 chr10 38841139 38841429 -101475336 + AluY SINE Alu 1 302 -9 22 35 0 0 chr10 38842122 38842151 -101474614 + AT_rich Low_complexity Low_complexity 1 29 0 2392 48 42 0 chr10 38842259 38842548 -101474217 - AluY SINE Alu -10 301 1 418 319 59 20 chr10 38842572 38842776 -101473989 - MIR SINE MIR -17 245 34 329 224 3 12 chr10 38843146 38843256 -101473509 - L1ME LINE L1 -340 5781 5672 1949 271 61 53 chr10 38843384 38844320 -101472445 - L2 LINE L2 -232 3081 2130 204 344 0 0 chr10 38844459 38844523 -101472242 - MIR SINE MIR -142 120 57 196 296 130 31 chr10 38844742 38844904 -101471861 - MIR SINE MIR -6 256 79 232 306 8 91 chr10 38845112 38845233 -101471532 - MIR3 SINE MIR -97 111 1 2147 90 10 32 chr10 38845854 38846213 -101470552 + AluY SINE Alu 1 311 0 1345 171 98 24 chr10 38846405 38846692 -101470073 + AluJo SINE Alu 1 308 -4 2514 64 3 3 chr10 38846964 38847275 -101469490 + AluY SINE Alu 1 311 0 2104 117 0 13 chr10 38847294 38847592 -101469173 + AluSx SINE Alu 1 294 -18 402 294 71 0 chr10 38847836 38847962 -101468803 - MIR SINE MIR -6 256 122 279 0 0 0 chr10 38848420 38848451 -101468314 + (TG)n Simple_repeat Simple_repeat 1 31 0 439 326 54 22 chr10 38848828 38849012 -101467753 - MER115 DNA AcHobo -440 253 64 2680 177 41 0 chr10 38849647 38850211 -101466554 - L1MA4 LINE L1 -5 6295 5709 342 294 8 71 chr10 38850945 38851071 -101465694 - L2 LINE L2 0 3313 3196 2325 82 0 10 chr10 38851926 38852230 -101464535 + AluY SINE Alu 1 301 -10 2443 82 0 0 chr10 38853549 38853852 -101462913 - AluY SINE Alu -8 303 1 2237 75 0 0 chr10 38853860 38854217 -101462548 - AluY SINE Alu 0 359 3 602 236 165 6 chr10 38854462 38854644 -101462121 - MIR SINE MIR -10 252 42 508 317 32 5 chr10 38854687 38854873 -101461892 + MER69 DNA AcHobo 134 324 -2202 621 165 9 94 chr10 38855028 38855162 -101461603 + MER69 DNA AcHobo 2002 2113 -413 2301 78 20 3 chr10 38855162 38855468 -101461297 - AluY SINE Alu 0 311 1 621 165 9 94 chr10 38855468 38855545 -101461220 + MER69 DNA AcHobo 2113 2195 -331 1640 200 55 3 chr10 38855548 38855893 -101460872 + MLT1A1 LTR MaLR 1 363 -2 3948 228 26 17 chr10 38855893 38857206 -101459559 + MLT1A1-int LTR MaLR 3 1413 -322 1596 161 27 7 chr10 38857206 38857504 -101459261 + MLT1A1 LTR MaLR 62 365 0 271 218 167 29 chr10 38857575 38857749 -101459016 + MER69 DNA AcHobo 2264 2461 -65 334 148 11 34 chr10 38857813 38857901 -101458864 + GA-rich Low_complexity Low_complexity 1 86 0 459 260 81 8 chr10 38858491 38858614 -101458151 - L2 LINE L2 0 3313 3182 26 0 0 0 chr10 38859341 38859367 -101457398 + AT_rich Low_complexity Low_complexity 1 26 0 404 102 42 51 chr10 38859483 38859601 -101457164 + GA-rich Low_complexity Low_complexity 1 117 0 375 78 0 0 chr10 38859719 38859770 -101456995 + (TCTA)n Simple_repeat Simple_repeat 1 51 0 1431 214 11 4 chr10 38859775 38860056 -101456709 - AluJo SINE Alu -25 287 5 2107 97 0 4 chr10 38860095 38860374 -101456391 + AluSg SINE Alu 1 278 -32 199 328 82 25 chr10 38860395 38860517 -101456248 + L2 LINE L2 3103 3231 -41 870 155 0 0 chr10 38862349 38862520 -101454245 + L1PA10 LINE L1 6007 6177 0 581 294 121 5 chr10 38862553 38862958 -101453807 + L1MC4a LINE L1 5531 5982 -1826 2276 44 3 44 chr10 38863053 38863375 -101453390 + AluY SINE Alu 1 310 0 2003 84 4 0 chr10 38863409 38863697 -101453068 + AluSp SINE Alu 35 323 0 678 226 29 0 chr10 38863777 38863914 -101452851 + FLAM_C SINE Alu 1 141 -2 893 176 19 0 chr10 38863926 38864085 -101452680 + AluJb SINE Alu 116 277 -35 261 0 0 0 chr10 38864086 38864115 -101452650 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 182 37 37 0 chr10 38864290 38864317 -101452448 + (GA)n Simple_repeat Simple_repeat 1 28 0 2215 100 0 44 chr10 38866669 38866988 -101449777 - AluSx SINE Alu -7 305 1 9690 146 21 10 chr10 38867309 38869037 -101447728 - Tigger1 DNA MER2_type 0 2418 672 3497 165 16 39 chr10 38869238 38869934 -101446831 - Tigger1 DNA MER2_type -1738 680 1 1744 189 41 15 chr10 38870691 38870765 -101446000 + MER7A DNA MER2_type 1 72 -2966 2293 87 0 3 chr10 38870765 38871063 -101445702 - AluY SINE Alu -14 297 1 1744 189 41 15 chr10 38871063 38871327 -101445438 + MER7A DNA MER2_type 72 346 0 266 292 83 17 chr10 38871862 38871982 -101444783 + MIR3 SINE MIR 44 171 -37 429 280 194 11 chr10 38872176 38872351 -101444414 - MIR SINE MIR -32 230 24 1218 280 129 35 chr10 38874239 38875039 -101441726 + L1ME3A LINE L1 5282 6156 -14 225 0 0 0 chr10 38878456 38878481 -101438284 + (T)n Simple_repeat Simple_repeat 1 25 0 2618 38 0 13 chr10 38878677 38878992 -101437773 - AluY SINE Alu 0 311 1 1360 205 18 21 chr10 38879549 38879832 -101436933 + AluJo SINE Alu 1 282 -30 1938 88 0 0 chr10 38881237 38881487 -101435278 + AluSq SINE Alu 1 250 -63 1433 189 39 4 chr10 38881604 38881885 -101434880 - AluJb SINE Alu -21 291 1 2094 105 14 3 chr10 38882451 38882737 -101434028 + AluSq SINE Alu 1 289 -24 350 132 19 0 chr10 38883733 38883786 -101432979 + AluS SINE Alu 232 285 -17 1776 144 7 7 chr10 38884134 38884412 -101432353 - AluSx SINE Alu -1 311 34 5123 55 0 10 chr10 38884412 38885105 -101431660 + L1P LINE L1 399 1084 -5062 * 8601 43 10 1 chr10 38885098 38886226 -101430539 + L1P LINE L1 1649 2786 -3360 1591 122 4 4 chr10 38886326 38886597 -101430168 + L1P LINE L1 4613 4883 -1263 231 182 0 0 chr10 38886596 38886640 -101430125 - L1ME LINE L1 -302 5933 5890 * 1109 246 157 18 chr10 38886645 38887096 -101429669 - LTR40a LTR ERVL -5 514 1 3916 247 53 47 chr10 38887101 38887598 -101429167 - L1ME LINE L1 -346 5889 5396 1618 161 15 15 chr10 38887598 38887872 -101428893 - AluJo SINE Alu 0 312 39 3916 247 53 47 chr10 38887872 38887905 -101428860 - L1ME LINE L1 -839 5396 5365 1316 185 87 96 chr10 38887905 38888375 -101428390 + MER31B LTR ERV1 1 466 0 3916 247 53 47 chr10 38888375 38888544 -101428221 - L1ME LINE L1 -870 5365 5198 2117 132 0 7 chr10 38888544 38888848 -101427917 - AluSx SINE Alu -10 302 1 3916 247 53 47 chr10 38888848 38889152 -101427613 - L1ME LINE L1 -1037 5198 4897 5023 117 60 18 chr10 38889152 38890488 -101426277 + L1PA15 LINE L1 4784 6158 -7 3916 247 53 47 chr10 38890488 38891719 -101425046 - L1ME LINE L1 -1338 4897 3640 2185 92 10 10 chr10 38891719 38892023 -101424742 - AluY SINE Alu -7 304 1 3916 247 53 47 chr10 38892023 38892123 -101424642 - L1ME LINE L1 -2595 3640 3542 586 313 182 14 chr10 38892245 38893025 -101423740 - L1ME LINE L1 -5350 1046 136 1641 200 50 64 chr10 38893045 38893545 -101423220 - MER82 DNA MER2_type 0 653 161 432 0 0 0 chr10 38894137 38894185 -101422580 + (TG)n Simple_repeat Simple_repeat 2 49 0 273 57 0 0 chr10 38894445 38894480 -101422285 + (TC)n Simple_repeat Simple_repeat 1 35 0 253 356 153 0 chr10 38896346 38896509 -101420256 - L3 LINE CR1 -114 1463 1276 26 30 0 0 chr10 38896518 38896551 -101420214 + AT_rich Low_complexity Low_complexity 1 33 0 585 219 0 0 chr10 38896552 38896675 -101420090 - MLT1A1 LTR MaLR -1 364 242 570 146 10 0 chr10 38896667 38896763 -101420002 - MLT1A1 LTR MaLR -236 129 33 * 366 323 111 5 chr10 38896771 38896969 -101419796 + L2 LINE L2 2234 2452 -862 1859 141 0 14 chr10 38896984 38897274 -101419491 - AluSx SINE Alu -26 286 1 255 287 82 49 chr10 38897390 38897512 -101419253 + L2 LINE L2 3179 3304 -9 180 125 0 0 chr10 38898678 38898710 -101418055 + (CA)n Simple_repeat Simple_repeat 1 32 0 785 272 26 0 chr10 38899454 38899649 -101417116 + MER63A DNA MER1_type 10 209 -1 2627 42 0 0 chr10 38899880 38900191 -101416574 + AluY SINE Alu 1 311 0 207 0 0 0 chr10 38900390 38900413 -101416352 + (A)n Simple_repeat Simple_repeat 1 23 0 495 209 127 0 chr10 38902676 38902786 -101413979 + FLAM_A SINE Alu 1 124 -9 281 430 36 0 chr10 38902803 38902996 -101413769 - L2 LINE L2 -584 2730 2531 575 236 0 11 chr10 38903000 38903174 -101413591 + L1M4 LINE L1 4966 5137 -1009 2472 70 0 0 chr10 38903176 38903477 -101413288 + AluY SINE Alu 1 301 -10 19197 37 5 0 chr10 38904112 38906599 -101410166 + L1P LINE L1 1659 4157 -1989 731 237 218 34 chr10 38906851 38907363 -101409402 - MLT1G3 LTR MaLR -7 535 1 1145 191 22 119 chr10 38907638 38908042 -101408723 + MLT1A1 LTR MaLR 1 365 0 222 159 0 23 chr10 38908426 38908470 -101408295 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 183 235 0 0 chr10 38908543 38908594 -101408171 + (TATATG)n Simple_repeat Simple_repeat 1 51 0 7019 40 0 0 chr10 38908605 38909701 -101407064 - L1PA5 LINE L1 0 6154 5034 241 359 8 38 chr10 38909710 38909841 -101406924 + L2 LINE L2 2620 2746 -568 349 363 51 39 chr10 39010784 39010974 -101305791 - L1ME4a LINE L1 -38 6083 5897 2313 101 0 0 chr10 39010974 39011281 -101305484 - AluSg SINE Alu -3 307 1 2148 132 0 0 chr10 39011283 39011593 -101305172 - AluSx SINE Alu -2 310 1 349 363 51 39 chr10 39011593 39011633 -101305132 - L1ME4a LINE L1 -224 5897 5847 337 232 20 10 chr10 39011848 39011947 -101304818 + L1MC4a LINE L1 5844 5943 -1865 1308 217 45 67 chr10 39011961 39012362 -101304403 + MLT1I LTR MaLR 16 407 -2 1782 126 49 7 chr10 39012463 39012749 -101304016 - AluSq SINE Alu -15 298 1 21 36 0 0 chr10 39012753 39012781 -101303984 + AT_rich Low_complexity Low_complexity 1 28 0 673 114 0 141 chr10 39012781 39012898 -101303867 + AluSg/x SINE Alu 182 275 -37 216 86 0 0 chr10 39012898 39012933 -101303832 + (TTAA)n Simple_repeat Simple_repeat 2 36 0 673 114 0 141 chr10 39012933 39012964 -101303801 + AluSg/x SINE Alu 275 309 -3 533 161 0 11 chr10 39012970 39013057 -101303708 - FLAM_C SINE Alu -23 120 35 324 270 36 0 chr10 39013523 39013660 -101303105 - L1MC4 LINE L1 0 8042 7901 1898 132 0 65 chr10 39013666 39013788 -101302977 + AluJb SINE Alu 1 129 -183 320 0 25 0 chr10 39013788 39013828 -101302937 + (CAA)n Simple_repeat Simple_repeat 2 42 0 1898 132 0 65 chr10 39013828 39014030 -101302735 + AluJb SINE Alu 129 304 -8 2267 95 7 3 chr10 39014031 39014335 -101302430 + AluSq SINE Alu 2 306 -7 484 95 0 0 chr10 39014335 39014398 -101302367 + Alu SINE Alu 2 64 -245 388 314 63 51 chr10 39014523 39014636 -101302129 - L1MC4 LINE L1 -306 7736 7619 2412 66 0 3 chr10 39014636 39014941 -101301824 - AluY SINE Alu -7 304 1 388 314 63 51 chr10 39014941 39015002 -101301763 - L1MC4 LINE L1 -423 7619 7560 881 99 41 0 chr10 39015040 39015161 -101301604 - FLAM_C SINE Alu -7 126 1 510 273 7 7 chr10 39015164 39015307 -101301458 - L1MC4 LINE L1 -454 7588 7446 1543 172 0 22 chr10 39015398 39015666 -101301099 - AluJo SINE Alu -50 262 1 415 129 0 0 chr10 39015666 39015728 -101301037 - MLT1B LTR MaLR -53 337 276 261 220 0 0 chr10 39015723 39015773 -101300992 - AluJ/monomer SINE Alu -251 50 1 * 311 193 12 24 chr10 39015773 39015856 -101300909 - L1MC4 LINE L1 -766 7276 7195 2055 129 20 0 chr10 39015856 39016150 -101300615 - AluSg SINE Alu -10 300 1 240 242 32 0 chr10 39016380 39016442 -101300323 - L1ME LINE L1 -299 5822 5759 5086 153 138 23 chr10 39016445 39017591 -101299174 - MER52C LTR ERV1 0 1278 1 231 317 20 0 chr10 39017591 39017692 -101299073 - L1ME LINE L1 -363 5758 5656 2300 97 3 0 chr10 39017693 39018002 -101298763 - AluSg SINE Alu 0 310 1 421 133 0 0 chr10 39018008 39018068 -101298697 - AluS SINE Alu -258 60 1 447 67 0 0 chr10 39018074 39018134 -101298631 - Alu SINE Alu -258 60 1 373 326 51 69 chr10 39018787 39018891 -101297874 + L2 LINE L2 2909 3010 -303 1942 133 0 42 chr10 39018891 39019200 -101297565 - AluSx SINE Alu -16 296 1 373 326 51 69 chr10 39019200 39019270 -101297495 + L2 LINE L2 3010 3080 -233 1796 95 0 4 chr10 39019270 39019511 -101297254 + AluSg SINE Alu 1 240 -70 1344 92 0 20 chr10 39019611 39019807 -101296958 - AluSx SINE Alu -120 192 1 244 335 38 65 chr10 39019932 39020133 -101296632 + L2 LINE L2 2545 2733 -581 2496 61 3 0 chr10 39020133 39020443 -101296322 + AluY SINE Alu 1 311 0 244 335 38 65 chr10 39020443 39020611 -101296154 + L2 LINE L2 2733 2904 -410 1348 167 0 0 chr10 39020664 39020886 -101295879 + AluJb SINE Alu 1 222 -90 449 129 0 0 chr10 39020986 39021048 -101295717 + AluS SINE Alu 231 292 -18 2079 92 6 60 chr10 39021061 39021376 -101295389 + AluSg SINE Alu 3 300 -10 1883 164 0 3 chr10 39021438 39021731 -101295034 - AluJb SINE Alu -14 298 7 275 278 0 33 chr10 39021753 39021843 -101294922 - MER81 DNA DNA -7 107 21 566 257 7 21 chr10 39021843 39021983 -101294782 + L2 LINE L2 3176 3313 0 951 181 5 27 chr10 39022227 39022415 -101294350 - AluJ SINE Alu 0 312 129 797 107 25 19 chr10 39022515 39022703 -101294062 - L1P LINE L1 -740 5411 5223 561 261 0 0 chr10 39022715 39022853 -101293912 - L1 LINE L1 -1137 5009 4872 252 141 0 84 chr10 39022857 39022928 -101293837 + MER21A LTR ERV1 861 925 -6 416 191 14 164 chr10 39022935 39023155 -101293610 + L2 LINE L2 3125 3311 -2 381 315 192 3 chr10 39023129 39023472 -101293293 - L2 LINE L2 -10 3303 2896 * 826 274 173 43 chr10 39023879 39024644 -101292121 + L2 LINE L2 2426 3310 -3 330 269 8 34 chr10 39024666 39024785 -101291980 + MIR SINE MIR 146 261 -1 287 258 52 21 chr10 39024833 39024930 -101291835 + MIR3 SINE MIR 55 154 -54 220 317 98 8 chr10 39024987 39025110 -101291655 - L2 LINE L2 -712 2602 2469 748 146 7 51 chr10 39025188 39025325 -101291440 - AluJ SINE Alu -181 131 1 2199 122 0 0 chr10 39025346 39025658 -101291107 - AluSx SINE Alu 0 312 1 22 0 0 0 chr10 39027155 39027177 -101289588 + GC_rich Low_complexity Low_complexity 1 22 0 189 317 169 48 chr10 39028487 39028736 -101288029 - L2 LINE L2 -415 2899 2621 2236 111 0 3 chr10 39029114 39029421 -101287344 - AluSg SINE Alu -4 306 1 2033 86 4 0 chr10 39029421 39029689 -101287076 - AluSp SINE Alu -12 301 32 1443 181 38 0 chr10 39029789 39030055 -101286710 + AluJo SINE Alu 25 300 -12 2021 89 4 4 chr10 39030667 39030937 -101285828 + AluSx SINE Alu 41 310 -2 730 153 9 0 chr10 39030943 39031054 -101285711 - FLAM_C SINE Alu -26 117 6 242 116 23 0 chr10 39031107 39031150 -101285615 + CT-rich Low_complexity Low_complexity 3 46 0 1121 186 9 28 chr10 39031153 39031368 -101285397 - AluJo SINE Alu -2 310 100 227 188 42 0 chr10 39031392 39031440 -101285325 - L1MB7 LINE L1 -32 6152 6103 782 245 78 5 chr10 39031463 39031667 -101285098 + MER20 DNA MER1_type 1 219 0 635 251 163 0 chr10 39033867 39034094 -101282671 - MLT1E1 LTR MaLR -13 641 378 390 195 40 1 chr10 39034121 39034281 -101282484 - MLT1E1 LTR MaLR -407 217 35 25 0 0 0 chr10 39034328 39034353 -101282412 + AT_rich Low_complexity Low_complexity 1 25 0 697 164 66 0 chr10 39034353 39034475 -101282290 + AluJo SINE Alu 1 130 -182 1056 191 68 38 chr10 39034907 39035200 -101281565 + MER21B LTR ERV1 13 314 -549 2163 103 0 0 chr10 39035203 39035516 -101281249 + AluSx SINE Alu 1 313 0 822 216 7 0 chr10 39035519 39035672 -101281093 + AluJo SINE Alu 137 290 -12 1764 171 7 0 chr10 39035672 39035952 -101280813 + AluSx SINE Alu 3 284 -28 788 253 61 7 chr10 39035982 39036278 -101280487 + L1MC4a LINE L1 5262 5573 -591 2162 112 3 3 chr10 39036453 39036756 -101280009 - AluSx SINE Alu -9 303 1 665 476 0 48 chr10 39036837 39037064 -101279701 - AluJo SINE Alu -94 218 3 309 310 26 26 chr10 39037072 39037227 -101279538 + L1MC4a LINE L1 5865 6019 -1789 2382 71 0 7 chr10 39037319 39037629 -101279136 + AluY SINE Alu 1 308 -3 2113 120 13 0 chr10 39037629 39037953 -101278812 + AluSq SINE Alu 1 313 0 382 297 77 45 chr10 39038035 39038190 -101278575 - L1MC4a LINE L1 -1834 5974 5815 1484 189 62 7 chr10 39038205 39038496 -101278269 + AluJo SINE Alu 1 307 -5 1592 178 0 7 chr10 39038501 39038770 -101277995 + AluJo SINE Alu 1 267 -45 844 101 0 8 chr10 39038772 39038901 -101277864 - AluSg/x SINE Alu -1 311 184 700 171 18 29 chr10 39039006 39039176 -101277589 + L1MB7 LINE L1 5994 6161 -23 248 329 32 71 chr10 39039266 39039549 -101277216 - L2 LINE L2 -474 2840 2569 2237 61 20 10 chr10 39039781 39040074 -101276691 + AluY SINE Alu 1 296 -15 1553 195 10 7 chr10 39040077 39040375 -101276390 + AluJo SINE Alu 1 299 -13 559 218 19 21 chr10 39041053 39041208 -101275557 - MIR SINE MIR -65 143 41 207 236 139 0 chr10 39041317 39041389 -101275376 - L2 LINE L2 -29 3284 3203 498 213 47 31 chr10 39041415 39041542 -101275223 - MIR SINE MIR -122 140 12 446 253 120 0 chr10 39041601 39041759 -101275006 - L1M4c LINE L1 -4787 1597 1421 1870 122 0 7 chr10 39042273 39042544 -101274221 + AluSx SINE Alu 20 288 -24 923 146 39 63 chr10 39043415 39043620 -101273145 - AluJo SINE Alu -47 265 66 245 212 126 86 chr10 39045806 39045957 -101270808 - MIR SINE MIR -75 187 31 314 313 0 0 chr10 39047107 39047190 -101269575 + L2 LINE L2 3230 3312 -1 23 68 0 0 chr10 39048554 39048598 -101268167 + GC_rich Low_complexity Low_complexity 1 44 0 57 61 0 0 chr10 39048868 39048967 -101267798 + GC_rich Low_complexity Low_complexity 1 99 0 210 270 7 36 chr10 39049147 39049284 -101267481 + GA-rich Low_complexity Low_complexity 3 135 0 1759 159 0 34 chr10 39049439 39049760 -101267005 - AluJb SINE Alu 0 312 3 541 248 7 35 chr10 39049767 39049908 -101266857 - MIR SINE MIR -70 192 56 192 346 144 0 chr10 39050441 39050545 -101266220 + L2 LINE L2 3138 3256 -16 411 158 18 18 chr10 39050563 39050677 -101266088 + (TGGA)n Simple_repeat Simple_repeat 1 114 0 654 211 35 6 chr10 39050780 39051101 -101265664 + (TGGA)n Simple_repeat Simple_repeat 1 330 0 306 271 25 34 chr10 39051356 39051474 -101265291 + (TGGA)n Simple_repeat Simple_repeat 1 117 0 672 234 5 58 chr10 39051477 39051551 -101265214 + MER105 DNA DNA 6 82 -122 2389 81 3 0 chr10 39051551 39051858 -101264907 - AluSp SINE Alu -5 308 1 672 234 5 58 chr10 39051858 39051988 -101264777 + MER105 DNA DNA 82 199 -5 965 181 0 23 chr10 39052087 39052258 -101264507 + AluSg/x SINE Alu 133 299 -11 2316 88 0 0 chr10 39052270 39052564 -101264201 + AluSx SINE Alu 1 294 -18 268 199 39 66 chr10 39052569 39052750 -101264015 + (CGGGA)n Simple_repeat Simple_repeat 3 178 0 800 130 0 0 chr10 39053041 39053156 -101263609 - AluJo SINE Alu -41 271 157 577 142 42 67 chr10 39053160 39053280 -101263485 - AluJo SINE Alu -195 117 1 322 303 7 21 chr10 39053280 39053425 -101263340 + CT-rich Low_complexity Low_complexity 2 144 0 357 306 75 45 chr10 39054028 39054410 -101262355 - LTR16B LTR ERVL 0 464 8 243 245 0 0 chr10 39054814 39054876 -101261889 + CT-rich Low_complexity Low_complexity 1 62 0 611 108 47 7 chr10 39055548 39055985 -101260780 + MSR1 Satellite Satellite 1 454 -30 2117 98 0 74 chr10 39056832 39057169 -101259596 + AluSx SINE Alu 1 312 0 679 94 15 12 chr10 39057546 39057872 -101258893 - MSR1 Satellite Satellite 0 327 1 207 114 0 0 chr10 39058619 39058654 -101258111 + (TC)n Simple_repeat Simple_repeat 2 36 0 674 107 9 2 chr10 39058949 39059534 -101257231 - MSR1 Satellite Satellite 0 589 1 384 244 41 57 chr10 39060424 39060547 -101256218 - MIR SINE MIR -40 222 102 2110 118 0 0 chr10 39060660 39060956 -101255809 + AluSx SINE Alu 1 296 -16 2143 82 3 39 chr10 39060959 39061289 -101255476 + AluSg SINE Alu 1 310 0 295 261 32 32 chr10 39061612 39061820 -101254945 + (TCTCTG)n Simple_repeat Simple_repeat 1 208 0 268 239 22 36 chr10 39062815 39062953 -101253812 + (CGGG)n Simple_repeat Simple_repeat 1 136 0 206 247 21 21 chr10 39063099 39063192 -101253573 + C-rich Low_complexity Low_complexity 4 96 0 612 91 23 19 chr10 39063548 39063773 -101252992 + MSR1 Satellite Satellite 1 225 -1 2418 73 3 13 chr10 39064992 39065308 -101251457 + AluSp SINE Alu 1 313 0 566 151 38 19 chr10 39065799 39065905 -101250860 + AluJo/FLAM SINE Alu 5 112 -200 1866 128 0 17 chr10 39065905 39066223 -101250542 - AluSx SINE Alu 0 312 1 22 56 0 0 chr10 39066601 39066637 -101250128 + GC_rich Low_complexity Low_complexity 1 36 0 2185 94 0 33 chr10 39067387 39067694 -101249071 - AluSx SINE Alu -15 297 1 440 267 90 99 chr10 39067780 39067966 -101248799 + L1ME4a LINE L1 5692 5878 -243 779 194 0 0 chr10 39067966 39068095 -101248670 + FLAM_C SINE Alu 1 129 -4 440 267 90 99 chr10 39068095 39068320 -101248445 + L1ME4a LINE L1 5878 6099 -22 328 287 29 44 chr10 39068496 39068632 -101248133 - MIR SINE MIR -58 150 17 589 77 0 2 chr10 39068904 39069113 -101247652 + AluSp SINE Alu 1 243 -70 447 143 0 0 chr10 39069321 39069391 -101247374 - AluS SINE Alu -21 290 221 194 0 39 0 chr10 39069422 39069448 -101247317 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 636 86 30 6 chr10 39070674 39071317 -101245448 - MSR1 Satellite Satellite 0 658 1 695 78 13 0 chr10 39072148 39072798 -101243967 - MSR1 Satellite Satellite 0 658 1 2376 91 7 0 chr10 39074745 39075054 -101241711 - AluSx SINE Alu -1 311 1 328 161 0 0 chr10 39075067 39075123 -101241642 - L2 LINE L2 -17 3296 3241 451 169 11 0 chr10 39075142 39075231 -101241534 + MER20 DNA MER1_type 80 169 -50 696 262 159 12 chr10 39075236 39075606 -101241159 - L2 LINE L2 -254 3059 2637 681 199 50 103 chr10 39075606 39075754 -101241011 + L1MB5 LINE L1 5889 6019 -155 2151 86 7 30 chr10 39075754 39076058 -101240707 - AluSx SINE Alu -15 297 1 681 199 50 103 chr10 39076058 39076170 -101240595 + L1MB5 LINE L1 6019 6135 -39 1113 79 0 0 chr10 39076230 39076370 -101240395 + AluSg1 SINE Alu 11 150 -159 251 61 0 0 chr10 39076370 39076403 -101240362 + AluSp/q SINE Alu 218 250 -53 1030 196 21 0 chr10 39076403 39076597 -101240168 + AluJo SINE Alu 85 282 -30 782 133 42 0 chr10 39076597 39076717 -101240048 - FLAM_C SINE Alu -4 139 15 542 161 11 11 chr10 39076715 39076808 -101239957 - FRAM SINE Alu -43 133 41 * 1863 161 3 3 chr10 39076823 39077122 -101239643 - AluJb SINE Alu -13 299 1 283 240 70 30 chr10 39077273 39077373 -101239392 - L2 LINE L2 0 3313 3210 186 171 0 0 chr10 39077602 39077643 -101239122 + G-rich Low_complexity Low_complexity 1 41 0 225 311 0 16 chr10 39078358 39078480 -101238285 + (CCGGG)n Simple_repeat Simple_repeat 4 123 0 * 381 280 6 23 chr10 39078404 39078579 -101238186 + (CGGGG)n Simple_repeat Simple_repeat 1 172 0 216 298 0 0 chr10 39080154 39080211 -101236554 + MIR SINE MIR 76 132 -76 269 286 10 20 chr10 39081040 39081138 -101235627 + CT-rich Low_complexity Low_complexity 3 99 0 615 254 22 54 chr10 39081320 39081505 -101235260 + MIR SINE MIR 49 227 -35 699 215 70 15 chr10 39082286 39082486 -101234279 + MER20 DNA MER1_type 9 219 0 2347 94 3 0 chr10 39082512 39082820 -101233945 - AluSp SINE Alu -4 309 1 1903 147 19 3 chr10 39083083 39083390 -101233375 + AluJb SINE Alu 1 312 0 2336 48 42 0 chr10 39088286 39088575 -101228190 - AluY SINE Alu -10 301 1 628 253 26 0 chr10 39089986 39090140 -101226625 + MIR3 SINE MIR 48 205 -3 239 297 0 16 chr10 39090869 39090933 -101225832 + MIR SINE MIR 128 190 -72 234 240 13 13 chr10 39092612 39092687 -101224078 + (CGGGG)n Simple_repeat Simple_repeat 1 75 0 21 0 0 0 chr10 39092752 39092773 -101223992 + GC_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr10 39093747 39093770 -101222995 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 564 266 101 0 chr10 39093775 39093993 -101222772 - Tigger3(Golem) DNA MER2_type 0 3038 2799 297 0 0 0 chr10 39094103 39094136 -101222629 + (TG)n Simple_repeat Simple_repeat 1 33 0 * 501 32 0 0 chr10 39094135 39094198 -101222567 + (GA)n Simple_repeat Simple_repeat 1 63 0 1022 116 0 0 chr10 39094200 39094338 -101222427 - AluSg/x SINE Alu -41 269 132 2039 103 3 33 chr10 39094338 39094638 -101222127 - AluSq SINE Alu -22 291 1 1259 129 5 0 chr10 39094647 39094833 -101221932 - AluJo SINE Alu -26 286 100 2091 113 31 0 chr10 39094857 39095148 -101221617 - AluSx SINE Alu -12 300 1 273 282 14 0 chr10 39095225 39095296 -101221469 + MIR SINE MIR 80 151 -111 353 371 47 33 chr10 39095750 39095963 -101220802 + L1ME3A LINE L1 5639 5854 -316 2184 110 0 7 chr10 39096020 39096329 -101220436 + AluSq SINE Alu 1 307 -6 405 78 13 39 chr10 39096564 39096641 -101220124 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 2138 74 7 7 chr10 39096754 39097037 -101219728 - AluY SINE Alu -28 283 1 2233 88 0 31 chr10 39097114 39097434 -101219331 - AluY SINE Alu -1 310 1 2213 98 0 7 chr10 39097443 39097770 -101218995 - AluSg1 SINE Alu 0 309 1 405 132 0 29 chr10 39097896 39097987 -101218778 + AluSp/q SINE Alu 224 313 0 864 138 38 12 chr10 39097987 39098147 -101218618 - THE1C LTR MaLR -211 164 1 2154 105 10 3 chr10 39098176 39098482 -101218283 + AluSx SINE Alu 1 308 -4 381 276 2 0 chr10 39098593 39098699 -101218066 - MIR SINE MIR -63 145 71 1220 203 108 0 chr10 39098804 39099100 -101217665 + L1MB5 LINE L1 5811 6138 -36 2094 124 0 16 chr10 39099105 39099419 -101217346 + AluSx SINE Alu 1 309 -3 297 179 0 90 chr10 39099441 39099519 -101217246 - AluJ/FRAM SINE Alu -16 286 216 1642 178 21 0 chr10 39099591 39099872 -101216893 - AluJo SINE Alu -25 287 1 180 296 0 19 chr10 39099945 39099999 -101216766 + MER5A DNA MER1_type 38 90 -99 1831 166 14 0 chr10 39100025 39100320 -101216445 - AluJo SINE Alu -13 299 1 222 253 13 13 chr10 39100321 39100422 -101216343 + (TA)n Simple_repeat Simple_repeat 1 101 0 1250 251 41 88 chr10 39100464 39100513 -101216252 + MLT1F LTR MaLR 1 51 -491 2194 97 7 7 chr10 39100513 39100813 -101215952 - AluSg SINE Alu -10 300 1 1250 251 41 88 chr10 39100813 39100995 -101215770 + MLT1F LTR MaLR 51 240 -302 2093 88 10 36 chr10 39100995 39101301 -101215464 + AluSq SINE Alu 1 298 -15 261 0 0 0 chr10 39101301 39101330 -101215435 + (TA)n Simple_repeat Simple_repeat 2 30 0 558 0 0 0 chr10 39101329 39101391 -101215374 + (GA)n Simple_repeat Simple_repeat 2 63 0 1250 251 41 88 chr10 39101330 39101671 -101215094 + MLT1F LTR MaLR 238 490 -52 2308 76 0 0 chr10 39101724 39102015 -101214750 + AluSg SINE Alu 1 291 -19 203 341 22 0 chr10 39102016 39102107 -101214658 + L2 LINE L2 2776 2868 -446 936 104 7 32 chr10 39102218 39102372 -101214393 - AluSx SINE Alu -146 166 17 662 212 0 0 chr10 39102381 39102499 -101214266 + FAM SINE Alu 49 166 -19 603 220 71 54 chr10 39102512 39102680 -101214085 + L1M4 LINE L1 5474 5644 -530 1264 69 0 0 chr10 39102683 39102843 -101213922 + AluSq SINE Alu 145 304 -9 225 388 0 0 chr10 39102854 39102988 -101213777 + (TGGA)n Simple_repeat Simple_repeat 4 137 0 192 298 155 0 chr10 39103001 39103085 -101213680 + MIR SINE MIR 4 100 -162 26 0 0 0 chr10 39103306 39103332 -101213433 + AT_rich Low_complexity Low_complexity 1 26 0 1997 71 0 46 chr10 39103338 39103621 -101213144 + AluY SINE Alu 1 270 -41 349 92 0 0 chr10 39103721 39103787 -101212978 - Alu SINE Alu -251 51 1 779 198 44 6 chr10 39103787 39103969 -101212796 - L1MB5 LINE L1 -47 6127 5939 1105 53 0 0 chr10 39104157 39104288 -101212477 - AluSg SINE Alu -179 131 1 2387 99 0 0 chr10 39104339 39104652 -101212113 - AluSq SINE Alu 0 313 1 325 309 55 0 chr10 39104655 39104765 -101212000 - MIR SINE MIR -37 225 110 2191 93 10 3 chr10 39104903 39105214 -101211551 + AluSp SINE Alu 1 313 0 204 0 83 0 chr10 39105976 39106012 -101210753 + T-rich Low_complexity Low_complexity 2 40 0 2339 61 0 0 chr10 39106014 39106294 -101210471 - AluSg SINE Alu -30 280 1 1045 82 0 27 chr10 39106295 39106441 -101210324 - AluSq/x SINE Alu -170 142 1 26 0 0 0 chr10 39106452 39106478 -101210287 + AT_rich Low_complexity Low_complexity 1 26 0 2136 125 0 3 chr10 39106609 39106914 -101209851 + AluSx SINE Alu 1 304 -8 2310 96 0 0 chr10 39106914 39107215 -101209550 + AluSx SINE Alu 1 301 -11 317 189 57 104 chr10 39107215 39107265 -101209500 + L1MB5 LINE L1 6073 6117 -57 2155 126 0 0 chr10 39107265 39107567 -101209198 - AluSq SINE Alu -11 302 1 317 189 57 104 chr10 39107567 39107622 -101209143 + L1MB5 LINE L1 6117 6173 -1 299 197 47 55 chr10 39107637 39107759 -101209006 - MSR1 Satellite Satellite -1 120 1 437 152 22 0 chr10 39108489 39108581 -101208184 - MSR1 Satellite Satellite 0 111 18 268 260 0 40 chr10 39108971 39109071 -101207694 - MSR1 Satellite Satellite -14 97 2 728 49 3 12 chr10 39109773 39110028 -101206737 - MSR1 Satellite Satellite 0 252 1 240 241 96 12 chr10 39110384 39110467 -101206298 + MSR1 Satellite Satellite 14 103 -8 2143 96 6 16 chr10 39110969 39111283 -101205482 + AluSq SINE Alu 3 313 0 2187 116 0 3 chr10 39111304 39111615 -101205150 + AluSq SINE Alu 1 310 -3 1787 122 45 25 chr10 39111622 39111908 -101204857 + AluJo SINE Alu 1 292 -20 1800 121 0 16 chr10 39112078 39112335 -101204430 - AluSx SINE Alu -27 285 33 2039 127 0 3 chr10 39112344 39112636 -101204129 - AluSx SINE Alu -19 293 3 297 192 0 55 chr10 39112736 39112809 -101203956 - AluS SINE Alu -233 69 1 309 234 47 85 chr10 39112809 39112906 -101203859 - MER106A DNA MER1_type -8 228 129 1690 180 3 19 chr10 39112906 39113087 -101203678 - AluJb SINE Alu 0 312 137 2355 89 0 3 chr10 39113087 39113390 -101203375 - AluSq SINE Alu -10 303 2 1690 180 3 19 chr10 39113390 39113525 -101203240 - AluJb SINE Alu -175 137 1 309 234 47 85 chr10 39113525 39113662 -101203103 - MER106A DNA MER1_type -107 129 3 495 232 18 9 chr10 39113664 39113776 -101202989 - L2 LINE L2 -4 3309 3197 657 333 37 8 chr10 39114227 39114470 -101202295 + MIR SINE MIR 5 254 -8 742 229 131 6 chr10 39114604 39114787 -101201978 - MER63A DNA MER1_type -2 208 3 236 282 42 14 chr10 39114845 39114916 -101201849 + MIR SINE MIR 71 143 -65 2244 96 0 3 chr10 39114937 39115109 -101201656 - AluSg SINE Alu -8 302 130 2361 87 0 0 chr10 39115109 39115409 -101201356 - AluY SINE Alu -11 300 1 2244 96 0 3 chr10 39115409 39115539 -101201226 - AluSg SINE Alu -180 130 1 2161 108 0 0 chr10 39115539 39115855 -101200910 - AluSx SINE Alu 0 316 1 2037 140 0 0 chr10 39116567 39116859 -101199906 + AluSx SINE Alu 1 292 -20 754 109 0 0 chr10 39116862 39116963 -101199802 - AluJo/FLAM SINE Alu -203 109 9 261 0 0 0 chr10 39118326 39118355 -101198410 + (T)n Simple_repeat Simple_repeat 1 29 0 208 135 0 0 chr10 39118579 39118616 -101198149 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 2366 83 0 3 chr10 39119600 39119902 -101196863 + AluSx SINE Alu 1 301 -11 824 194 38 21 chr10 39120126 39120312 -101196453 - MER20 DNA MER1_type -1 218 30 1059 222 169 14 chr10 39120318 39120750 -101196015 + MLT1D LTR MaLR 6 504 -1 1906 164 18 0 chr10 39121127 39121468 -101195297 + MLT1A1 LTR MaLR 19 365 0 310 171 239 11 chr10 39121664 39121752 -101195013 - MER81 DNA DNA -3 111 4 355 179 16 41 chr10 39122010 39122133 -101194632 + C-rich Low_complexity Low_complexity 5 124 0 2113 127 0 13 chr10 39122536 39122850 -101193915 + AluSx SINE Alu 1 310 -2 1801 143 3 73 chr10 39122883 39123072 -101193693 - AluJb SINE Alu -6 306 148 369 0 0 0 chr10 39123072 39123113 -101193652 + (TG)n Simple_repeat Simple_repeat 2 42 0 1801 143 3 73 chr10 39123113 39123252 -101193513 - AluJb SINE Alu -164 148 1 2183 80 31 0 chr10 39123294 39123583 -101193182 - AluSg SINE Alu -12 298 1 401 250 108 0 chr10 39123823 39123943 -101192822 + MER117 DNA MER1_type 18 150 -47 502 293 43 0 chr10 39124025 39124189 -101192576 + MIR SINE MIR 31 201 -61 186 359 54 0 chr10 39126461 39126553 -101190212 + L2 LINE L2 3209 3305 -8 435 252 38 50 chr10 39126837 39126996 -101189769 - MIR3 SINE MIR -15 193 37 260 293 24 85 chr10 39127245 39127409 -101189356 - MIR3 SINE MIR -53 155 2 632 146 6 55 chr10 39128256 39128565 -101188200 + MSR1 Satellite Satellite 1 293 -2 485 287 7 7 chr10 39129377 39129520 -101187245 - MIR SINE MIR -65 197 55 235 244 326 0 chr10 39129626 39129712 -101187053 - L2 LINE L2 0 3272 3159 611 191 143 19 chr10 39129783 39129993 -101186772 + MLT1C LTR MaLR 126 361 -106 2166 128 0 6 chr10 39129993 39130306 -101186459 - AluSq SINE Alu -2 311 1 1097 81 0 0 chr10 39130306 39130442 -101186323 - AluSq/x SINE Alu -176 136 1 331 279 240 22 chr10 39130444 39130623 -101186142 + MIR SINE MIR 44 261 -1 225 229 71 29 chr10 39131095 39131165 -101185600 + MIR SINE MIR 117 189 -73 2129 125 0 0 chr10 39131177 39131489 -101185276 + AluSx SINE Alu 1 312 0 648 233 39 11 chr10 39131514 39131694 -101185071 + MER82 DNA MER2_type 1 185 -468 845 109 39 0 chr10 39131696 39131824 -101184941 - AluSg1 SINE Alu -15 297 165 699 70 0 0 chr10 39131824 39131910 -101184855 - AluSg1 SINE Alu -223 86 1 1813 216 48 18 chr10 39131910 39132364 -101184401 + MER82 DNA MER2_type 179 646 -7 1488 113 196 23 chr10 39132390 39132656 -101184109 + AluSx SINE Alu 1 312 0 412 273 117 73 chr10 39132692 39132745 -101184020 - MIR SINE MIR -37 225 176 2238 99 6 6 chr10 39132745 39133058 -101183707 + AluSq SINE Alu 1 313 0 412 273 117 73 chr10 39133058 39133209 -101183556 - MIR SINE MIR -86 176 12 314 284 11 0 chr10 39133341 39133429 -101183336 + MIR SINE MIR 33 121 -87 1949 120 27 0 chr10 39133492 39133791 -101182974 + AluSg SINE Alu 1 307 -3 1764 148 0 57 chr10 39133823 39133992 -101182773 - AluJo SINE Alu -10 302 158 2498 40 0 7 chr10 39133992 39134293 -101182472 - AluY SINE Alu -11 300 2 1764 148 0 57 chr10 39134293 39134441 -101182324 - AluJo SINE Alu -154 158 3 238 268 120 63 chr10 39134716 39134858 -101181907 - L2 LINE L2 -252 3061 2912 2080 112 0 3 chr10 39134887 39135174 -101181591 - AluSx SINE Alu -26 286 1 2006 141 0 3 chr10 39135436 39135748 -101181017 + AluJb SINE Alu 1 311 -1 2086 128 0 0 chr10 39135759 39136056 -101180709 + AluSx SINE Alu 2 298 -14 2102 124 0 0 chr10 39136058 39136357 -101180408 + AluSx SINE Alu 1 299 -13 25 0 0 0 chr10 39136991 39137016 -101179749 + AT_rich Low_complexity Low_complexity 1 25 0 2188 108 3 0 chr10 39137032 39137329 -101179436 - AluSg SINE Alu -12 298 1 261 0 0 0 chr10 39137329 39137358 -101179407 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 1126 129 6 28 chr10 39137358 39137507 -101179258 - AluSg/x SINE Alu -30 280 134 1847 91 109 4 chr10 39137507 39137782 -101178983 - AluSx SINE Alu -8 304 1 1126 129 6 28 chr10 39137782 39137810 -101178955 - AluSg/x SINE Alu -176 134 107 276 29 0 0 chr10 39137811 39137846 -101178919 + U2 snRNA snRNA 1 35 -153 810 227 0 0 chr10 39137849 39137999 -101178766 - AluJb SINE Alu -27 285 136 2338 90 0 0 chr10 39138007 39138307 -101178458 - AluSx SINE Alu -12 300 1 593 258 14 24 chr10 39138312 39138521 -101178244 - L1MC5 LINE L1 -35 7926 7720 2209 103 7 3 chr10 39138799 39139109 -101177656 + AluSx SINE Alu 1 311 -1 1523 132 107 22 chr10 39139332 39139604 -101177161 - AluJb SINE Alu -17 295 1 355 126 20 25 chr10 39139633 39139733 -101177032 + FLAM SINE Alu 64 121 -12 249 247 82 0 chr10 39140072 39140157 -101176608 - MER20 DNA MER1_type -4 215 124 700 186 7 57 chr10 39140278 39140418 -101176347 - FLAM_C SINE Alu 0 133 1 309 314 76 0 chr10 39140421 39140555 -101176210 - MIR SINE MIR -62 146 51 1266 218 38 145 chr10 39140849 39140921 -101175844 - L1MB7 LINE L1 -9 6175 6097 1719 169 30 3 chr10 39140921 39141223 -101175542 + AluJb SINE Alu 1 310 -2 1266 218 38 145 chr10 39141223 39141341 -101175424 - L1MB7 LINE L1 -87 6097 5968 2398 81 10 0 chr10 39141341 39141651 -101175114 - AluSq SINE Alu 0 313 1 1266 218 38 145 chr10 39141651 39142116 -101174649 - L1MB7 LINE L1 -216 5968 5589 2086 103 16 22 chr10 39142121 39142432 -101174333 - AluSx SINE Alu -3 309 1 2004 133 24 0 chr10 39143951 39144245 -101172520 + AluSx SINE Alu 1 301 -11 2333 92 3 0 chr10 39144332 39144637 -101172128 - AluSp SINE Alu -7 306 1 1146 158 91 24 chr10 39145488 39145536 -101171229 - L1MB7 LINE L1 -19 6165 6118 387 258 89 48 chr10 39145536 39145741 -101171024 - L1MB1 LINE L1 -163 6026 5887 2044 106 3 3 chr10 39145741 39146049 -101170716 - AluSq SINE Alu 0 308 1 387 258 89 48 chr10 39146049 39146103 -101170662 - L1MB1 LINE L1 -302 5887 5837 1026 200 39 45 chr10 39146224 39146390 -101170375 - L1MB1 LINE L1 -864 5282 5117 2627 36 0 0 chr10 39146390 39146694 -101170071 - AluY SINE Alu -7 304 1 1026 200 39 45 chr10 39146694 39146857 -101169908 - L1MB1 LINE L1 -1029 5117 4955 192 97 0 0 chr10 39147640 39147671 -101169094 + (CCCCCA)n Simple_repeat Simple_repeat 4 34 0 646 107 9 5 chr10 39147819 39148482 -101168283 - MSR1 Satellite Satellite 0 665 1 678 109 18 3 chr10 39149128 39149525 -101167240 - MSR1 Satellite Satellite 0 402 1 303 179 17 86 chr10 39151100 39151217 -101165548 + GA-rich Low_complexity Low_complexity 2 110 0 221 247 45 56 chr10 39151189 39151367 -101165398 + (CAGAGA)n Simple_repeat Simple_repeat 3 178 0 * 274 264 6 66 chr10 39151315 39151482 -101165283 + GA-rich Low_complexity Low_complexity 6 162 0 1502 147 128 11 chr10 39152036 39152309 -101164456 + AluJo SINE Alu 1 305 -7 546 311 24 48 chr10 39152365 39152616 -101164149 - L2 LINE L2 -5 3308 3064 428 82 33 0 chr10 39152616 39152677 -101164088 - AluYb8 SINE Alu -174 144 82 2420 90 0 0 chr10 39152693 39153003 -101163762 - AluSg SINE Alu 0 310 1 238 215 92 0 chr10 39153010 39153075 -101163690 - MER94 DNA DNA -61 73 3 1800 164 3 7 chr10 39153075 39153385 -101163380 - AluJo SINE Alu -3 309 1 1993 184 106 2 chr10 39153411 39153846 -101162919 + MLT1D LTR MaLR 26 505 0 375 23 0 0 chr10 39153897 39153941 -101162824 + (CA)n Simple_repeat Simple_repeat 1 44 0 229 276 92 10 chr10 39154360 39154458 -101162307 - MIR SINE MIR -62 146 41 580 249 146 5 chr10 39155878 39156063 -101160702 + MIR SINE MIR 31 241 -21 787 222 17 78 chr10 39156089 39156119 -101160646 + MIR SINE MIR 20 50 -212 1769 152 10 29 chr10 39156119 39156429 -101160336 - AluSx SINE Alu -8 304 1 787 222 17 78 chr10 39156429 39156628 -101160137 + MIR SINE MIR 50 235 -27 2005 117 7 3 chr10 39156806 39157096 -101159669 - AluSx SINE Alu -21 291 1 827 185 65 10 chr10 39157695 39157895 -101158870 - L2 LINE L2 -247 3066 2856 252 317 0 0 chr10 39158412 39158472 -101158293 - L2 LINE L2 -1 3312 3253 21 0 0 0 chr10 39158573 39158594 -101158171 + AT_rich Low_complexity Low_complexity 1 21 0 1545 221 128 7 chr10 39158690 39158926 -101157839 - L1MB5 LINE L1 -76 6098 5892 1562 158 37 71 chr10 39158926 39159093 -101157672 - AluSx SINE Alu 0 312 160 2225 113 0 0 chr10 39159093 39159393 -101157372 - AluSg SINE Alu -10 300 1 1562 158 37 71 chr10 39159393 39159548 -101157217 - AluSx SINE Alu -152 160 1 1545 221 128 7 chr10 39159548 39159773 -101156992 - L1MB5 LINE L1 -282 5892 5581 246 130 0 22 chr10 39159778 39159824 -101156941 - MER58A DNA MER1_type -33 74 30 2237 158 21 13 chr10 39160018 39160405 -101156360 - MLT1B LTR MaLR 0 390 1 24 0 0 0 chr10 39261039 39261063 -101055702 + AT_rich Low_complexity Low_complexity 1 24 0 536 267 88 80 chr10 39261806 39262162 -101054603 - HAL1 LINE L1 -269 2238 1872 2279 70 0 30 chr10 39262162 39262460 -101054305 + AluY SINE Alu 1 289 -22 536 267 88 80 chr10 39262460 39262781 -101053984 - HAL1 LINE L1 -635 1872 1555 2112 131 0 3 chr10 39262794 39263099 -101053666 + AluSx SINE Alu 1 304 -8 488 290 138 24 chr10 39263109 39263450 -101053315 + MLT1J2 LTR MaLR 1 380 -70 2204 75 7 3 chr10 39263453 39263768 -101052997 - AluY SINE Alu 0 316 1 2087 96 3 27 chr10 39263873 39264174 -101052591 + AluSc SINE Alu 1 294 -15 1114 180 28 37 chr10 39264237 39264369 -101052396 + AluJo SINE Alu 6 137 -175 207 0 0 0 chr10 39264369 39264392 -101052373 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1114 180 28 37 chr10 39264392 39264476 -101052289 + AluJo SINE Alu 137 220 -92 1910 158 7 0 chr10 39264679 39264970 -101051795 + AluSx SINE Alu 3 295 -17 189 0 0 0 chr10 39265079 39265100 -101051665 + (GA)n Simple_repeat Simple_repeat 2 22 0 189 0 0 0 chr10 39265249 39265270 -101051495 + (GA)n Simple_repeat Simple_repeat 2 22 0 2250 103 3 0 chr10 39265628 39265918 -101050847 + AluSp SINE Alu 3 293 -20 2486 305 60 53 chr10 39266097 39267556 -101049209 + L2 LINE L2 1841 3313 0 2444 70 0 0 chr10 39267852 39268151 -101048614 + AluY SINE Alu 1 299 -12 21 0 0 0 chr10 39268196 39268217 -101048548 + AT_rich Low_complexity Low_complexity 1 21 0 23 78 0 0 chr10 39269425 39269476 -101047289 + AT_rich Low_complexity Low_complexity 1 51 0 258 32 0 0 chr10 39269476 39269507 -101047258 + (GA)n Simple_repeat Simple_repeat 2 32 0 2312 94 0 10 chr10 39269579 39269877 -101046888 - AluY SINE Alu -16 295 1 32 26 0 0 chr10 39269953 39269992 -101046773 + AT_rich Low_complexity Low_complexity 1 39 0 1978 149 7 0 chr10 39270998 39271300 -101045465 - AluSx SINE Alu -8 304 1 25 0 0 0 chr10 39271302 39271327 -101045438 + AT_rich Low_complexity Low_complexity 1 25 0 255 295 13 0 chr10 39271364 39271442 -101045323 + Charlie2 DNA MER1_type 2784 2862 0 2103 111 10 3 chr10 39271648 39271946 -101044819 - AluSx SINE Alu -12 300 1 202 253 192 20 chr10 39272064 39272163 -101044602 + L2 LINE L2 3173 3288 -25 180 308 0 0 chr10 39272365 39272417 -101044348 + L2 LINE L2 3262 3313 0 400 294 153 13 chr10 39272427 39272655 -101044110 + MIR SINE MIR 1 260 -2 2331 78 10 0 chr10 39273325 39273619 -101043146 + AluY SINE Alu 1 297 -14 31 26 0 0 chr10 39273625 39273663 -101043102 + AT_rich Low_complexity Low_complexity 1 38 0 219 267 127 47 chr10 39273936 39274086 -101042679 + L3b LINE CR1 1137 1298 -285 322 320 24 0 chr10 39274672 39274797 -101041968 - L2 LINE L2 0 3313 3186 202 250 0 0 chr10 39276421 39276465 -101040300 + A-rich Low_complexity Low_complexity 1 44 0 290 26 26 0 chr10 39277391 39277430 -101039335 + (TG)n Simple_repeat Simple_repeat 2 41 0 303 202 24 0 chr10 39279774 39279858 -101036907 + Charlie2 DNA MER1_type 2287 2372 -490 2090 146 37 37 chr10 39279961 39280518 -101036247 - MLT2A2 LTR ERVL 0 554 1 530 178 13 53 chr10 39280518 39280669 -101036096 + Charlie2 DNA MER1_type 2463 2607 -255 651 217 190 0 chr10 39282114 39282298 -101034467 + MER20 DNA MER1_type 1 219 0 1070 190 40 117 chr10 39282387 39282782 -101033983 + MLT1A1 LTR MaLR 1 365 0 2208 118 0 0 chr10 39284142 39284439 -101032326 - AluSg SINE Alu -11 299 3 217 200 15 77 chr10 39284442 39284460 -101032305 + MIR SINE MIR 98 116 -146 1949 174 0 7 chr10 39284460 39284759 -101032006 - AluSx SINE Alu -15 297 1 217 200 15 77 chr10 39284759 39284805 -101031960 + MIR SINE MIR 116 158 -104 186 43 0 0 chr10 39284840 39284863 -101031902 + (CA)n Simple_repeat Simple_repeat 2 24 0 454 183 63 80 chr10 39285496 39285671 -101031094 + MER53 DNA DNA 5 176 -13 311 230 11 1 chr10 39285707 39285796 -101030969 - MLT1J1 LTR MaLR 0 446 363 225 178 110 27 chr10 39286019 39286092 -101030673 - MLT1J2 LTR MaLR -371 79 1 4806 89 21 44 chr10 39286356 39286854 -101029911 - L1PA11 LINE L1 0 6174 5666 2294 95 0 0 chr10 39286854 39287150 -101029615 - AluY SINE Alu -11 300 5 4806 89 21 44 chr10 39287150 39287325 -101029440 - L1PA11 LINE L1 -508 5666 5519 2233 129 0 0 chr10 39287325 39287628 -101029137 - AluSx SINE Alu -9 303 1 4806 89 21 44 chr10 39287628 39287749 -101029016 - L1PA11 LINE L1 -655 5519 5397 2222 85 0 0 chr10 39288109 39288418 -101028347 + AluY SINE Alu 1 309 0 22 0 0 0 chr10 39289319 39289341 -101027424 + AT_rich Low_complexity Low_complexity 1 22 0 207 136 23 23 chr10 39289657 39289701 -101027064 + CT-rich Low_complexity Low_complexity 1 44 0 1168 209 15 116 chr10 39290340 39290746 -101026019 + MLT1A1 LTR MaLR 1 365 0 588 316 39 19 chr10 39290793 39290999 -101025766 - MIR SINE MIR -31 231 22 351 144 0 7 chr10 39291238 39291336 -101025429 - Alu SINE Alu 0 302 134 2476 70 3 0 chr10 39291336 39291638 -101025127 - AluSp SINE Alu -10 303 1 366 176 14 0 chr10 39293080 39293154 -101023611 + MER103 DNA DNA 40 114 -52 2018 137 44 22 chr10 39293624 39293989 -101022776 + THE1C LTR MaLR 1 373 -2 2379 50 0 3 chr10 39295454 39295784 -101020981 - AluY SINE Alu 0 329 1 198 0 0 0 chr10 39295784 39295806 -101020959 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2025 111 4 4 chr10 39295806 39296085 -101020680 - AluSc SINE Alu -30 279 1 271 310 0 0 chr10 39296644 39296702 -101020063 - MER91 DNA MER1_type -81 59 2 1234 168 0 42 chr10 39296854 39297092 -101019673 - L1MC1 LINE L1 -17 6316 6089 2017 133 14 3 chr10 39297528 39297822 -101018943 + AluSg SINE Alu 1 297 -13 1163 154 46 10 chr10 39297912 39298137 -101018628 + AluSg/x SINE Alu 83 314 0 2759 173 7 9 chr10 39298208 39298764 -101018001 + L1MA5 LINE L1 5746 6300 0 2132 256 204 23 chr10 39299617 39299761 -101017004 + L1MC4 LINE L1 6459 6576 -1466 2259 96 7 3 chr10 39299761 39300063 -101016702 - AluSc SINE Alu -6 303 1 2132 256 204 23 chr10 39300063 39300844 -101015921 + L1MC4 LINE L1 6576 7214 -828 656 214 0 24 chr10 39300844 39300970 -101015795 + FLAM_A SINE Alu 1 123 -10 2132 256 204 23 chr10 39300970 39301265 -101015500 + L1MC4 LINE L1 7214 7901 -141 248 160 0 0 chr10 39301266 39301316 -101015449 + L1MC4 LINE L1 7989 8038 -4 2072 111 0 42 chr10 39301339 39301646 -101015119 + AluSx SINE Alu 5 298 -14 749 290 81 76 chr10 39302053 39302668 -101014097 + L2 LINE L2 2538 3168 -145 336 287 81 0 chr10 39302730 39302866 -101013899 + L1ME LINE L1 28 174 -5896 2265 115 0 10 chr10 39302872 39303338 -101013427 - AluY SINE Alu 0 463 1 770 165 17 11 chr10 39303338 39303514 -101013251 + CT-rich Low_complexity Low_complexity 3 179 0 266 163 11 43 chr10 39303531 39303623 -101013142 + CT-rich Low_complexity Low_complexity 3 91 0 424 235 31 0 chr10 39303678 39303776 -101012989 + L1ME LINE L1 438 538 -5532 763 256 96 82 chr10 39303791 39304180 -101012585 + L1ME LINE L1 676 1058 -5061 2261 100 7 0 chr10 39304180 39304481 -101012284 + AluY SINE Alu 1 303 -8 763 256 96 82 chr10 39304481 39305308 -101011457 + L1ME LINE L1 1058 1941 -4178 2215 125 0 0 chr10 39305319 39305624 -101011141 + AluSg SINE Alu 1 305 -5 1716 122 6 113 chr10 39305632 39306012 -101010753 + AluSg SINE Alu 1 344 0 2092 122 0 7 chr10 39306017 39306313 -101010452 + AluSc SINE Alu 1 294 -15 242 262 49 18 chr10 39306315 39306479 -101010286 + L1ME LINE L1 1909 2077 -4003 26 50 0 0 chr10 39306492 39306532 -101010233 + AT_rich Low_complexity Low_complexity 1 40 0 286 276 62 14 chr10 39306550 39306695 -101010070 + L1ME LINE L1 2110 2261 -3819 2279 79 3 20 chr10 39306699 39307003 -101009762 + AluY SINE Alu 1 299 -12 2380 277 70 38 chr10 39307013 39308196 -101008569 + L1ME LINE L1 3066 4314 -1766 311 0 0 22 chr10 39308196 39308242 -101008523 + L1PA2 LINE L1 6108 6152 -3 2380 277 70 38 chr10 39308242 39308638 -101008127 + L1ME LINE L1 4314 4696 -1384 2388 66 0 31 chr10 39308649 39308968 -101007797 - AluY SINE Alu -2 309 1 278 326 12 0 chr10 39308995 39309081 -101007684 + MIR SINE MIR 65 151 -111 22 35 0 0 chr10 39309117 39309146 -101007619 + AT_rich Low_complexity Low_complexity 1 29 0 2271 87 20 0 chr10 39309400 39309699 -101007066 - AluY SINE Alu -6 305 1 670 263 38 6 chr10 39311443 39311603 -101005162 + MER5A DNA MER1_type 1 165 -24 1870 214 47 69 chr10 39311612 39312234 -101004531 + MLT1E2 LTR MaLR 18 625 -1 21 57 0 0 chr10 39312535 39312570 -101004195 + AT_rich Low_complexity Low_complexity 1 35 0 2505 58 0 0 chr10 39312570 39312863 -101003902 - AluY SINE Alu -18 293 1 210 312 152 0 chr10 39312864 39312989 -101003776 + MIR SINE MIR 104 247 -15 285 266 185 17 chr10 39313057 39313230 -101003535 - LTR16A1 LTR ERVL 0 457 256 2374 77 7 10 chr10 39313504 39313803 -101002962 - AluSp SINE Alu -15 298 1 21 36 0 0 chr10 39316033 39316061 -101000704 + AT_rich Low_complexity Low_complexity 1 28 0 1886 167 16 8 chr10 39316068 39316452 -101000313 - L1MA4 LINE L1 -9 6291 5905 25 0 0 0 chr10 39317968 39317993 -100998772 + AT_rich Low_complexity Low_complexity 1 25 0 3378 183 19 4 chr10 39319414 39320091 -100996674 - L1PA16 LINE L1 -16 6150 5464 2037 123 33 3 chr10 39320121 39320421 -100996344 + AluSc SINE Alu 1 309 0 455 286 78 10 chr10 39321077 39321270 -100995495 + MIR SINE MIR 39 250 -12 1985 97 87 7 chr10 39322393 39322682 -100994083 - AluSx SINE Alu 0 312 1 698 125 70 7 chr10 39322766 39322932 -100993833 + L1MA9 LINE L1 6110 6311 -1 850 284 0 0 chr10 39323464 39323686 -100993079 + Charlie1 DNA MER1_type 1 222 -2539 580 212 15 0 chr10 39323685 39323822 -100992943 + Charlie1 DNA MER1_type 2622 2760 -1 * 2146 138 0 10 chr10 39323988 39324299 -100992466 - AluSg SINE Alu -2 308 1 22 35 0 0 chr10 39324606 39324635 -100992130 + AT_rich Low_complexity Low_complexity 1 29 0 2414 172 16 31 chr10 39326485 39326583 -100990182 - L1MC1 LINE L1 -13 6320 6222 2220 77 3 0 chr10 39326583 39326910 -100989855 - AluSp SINE Alu 0 328 1 2414 172 16 31 chr10 39326910 39327327 -100989438 - L1MC1 LINE L1 -111 6222 5812 2040 145 0 0 chr10 39328423 39328712 -100988053 + AluSg SINE Alu 1 289 -21 23 0 0 0 chr10 39328745 39328768 -100987997 + AT_rich Low_complexity Low_complexity 1 23 0 2370 90 3 3 chr10 39328943 39329254 -100987511 - AluY SINE Alu 0 311 1 2351 83 0 0 chr10 39329458 39329760 -100987005 + AluY SINE Alu 2 303 -8 470 290 88 20 chr10 39330786 39331127 -100985638 - L1MCc LINE L1 -4893 1530 1167 2173 119 3 10 chr10 39331693 39332005 -100984760 - AluSx SINE Alu -2 310 1 271 333 36 23 chr10 39332039 39332258 -100984507 - L1MCc LINE L1 -6180 243 22 489 310 88 41 chr10 39332446 39332865 -100983900 - L1MEc LINE L1 -4574 1822 1384 23 0 0 0 chr10 39333942 39333965 -100982800 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr10 39334349 39334374 -100982391 + AT_rich Low_complexity Low_complexity 1 25 0 2383 67 0 32 chr10 39334504 39334817 -100981948 + AluY SINE Alu 1 303 -8 24 0 0 0 chr10 39336661 39336685 -100980080 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr10 39338161 39338187 -100978578 + AT_rich Low_complexity Low_complexity 1 26 0 418 255 0 0 chr10 39338267 39338365 -100978400 - MER58 DNA MER1_type -4 2416 2319 424 260 21 0 chr10 39338377 39338473 -100978292 - MER58 DNA MER1_type -2320 100 3 2332 73 0 3 chr10 39338549 39338849 -100977916 - AluY SINE Alu -12 299 1 212 296 93 0 chr10 39338906 39338960 -100977805 + L2 LINE L2 3206 3264 -8 23 0 0 0 chr10 39339164 39339187 -100977578 + AT_rich Low_complexity Low_complexity 1 23 0 1824 162 3 0 chr10 39339187 39339484 -100977281 - AluSx SINE Alu -14 298 1 323 254 13 9 chr10 39340027 39340253 -100976512 + CT-rich Low_complexity Low_complexity 1 227 0 1851 178 7 47 chr10 39341059 39341296 -100975469 - MLT1B LTR MaLR 0 390 174 2228 114 55 0 chr10 39341296 39341639 -100975126 - THE1B LTR MaLR 0 364 3 1851 178 7 47 chr10 39341639 39341806 -100974959 - MLT1B LTR MaLR -216 174 2 2377 85 3 0 chr10 39342326 39342621 -100974144 - AluY SINE Alu -15 296 1 21 57 0 0 chr10 39342626 39342661 -100974104 + AT_rich Low_complexity Low_complexity 1 35 0 321 261 79 61 chr10 39343080 39343245 -100973520 - MLT1K LTR MaLR -26 562 395 180 125 0 0 chr10 39343335 39343367 -100973398 + (TC)n Simple_repeat Simple_repeat 2 33 0 609 193 30 52 chr10 39343646 39343781 -100972984 - FLAM_A SINE Alu 0 133 2 2461 82 0 0 chr10 39344055 39344358 -100972407 + AluY SINE Alu 1 303 -8 201 74 0 0 chr10 39344482 39344509 -100972256 + (TG)n Simple_repeat Simple_repeat 1 27 0 581 156 0 90 chr10 39344991 39345113 -100971652 - HY1 scRNA scRNA -1 111 1 2075 125 16 13 chr10 39345580 39345891 -100970874 + AluSx SINE Alu 1 312 0 360 283 0 17 chr10 39345893 39346013 -100970752 + MLT1H LTR MaLR 91 208 -341 24 53 0 0 chr10 39346152 39346190 -100970575 + AT_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr10 39346450 39346478 -100970287 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 39346535 39346556 -100970209 + AT_rich Low_complexity Low_complexity 1 21 0 2307 77 0 0 chr10 39346559 39346845 -100969920 + AluY SINE Alu 1 286 -25 2346 83 0 29 chr10 39347394 39347708 -100969057 + AluY SINE Alu 1 305 -6 1352 199 106 9 chr10 39347909 39348240 -100968525 + MLT1A1 LTR MaLR 1 363 -2 2628 51 0 0 chr10 39350049 39350360 -100966405 - AluY SINE Alu 0 311 1 1604 193 78 49 chr10 39350652 39350731 -100966034 + MER101 LTR ERV1 11 86 -388 2243 79 0 7 chr10 39350731 39351034 -100965731 + AluY SINE Alu 1 301 -10 1604 193 78 49 chr10 39351034 39351405 -100965360 + MER101 LTR ERV1 86 474 0 207 0 0 0 chr10 39351927 39351950 -100964815 + (TA)n Simple_repeat Simple_repeat 1 23 0 234 198 0 41 chr10 39351973 39351993 -100964772 + (TA)n Simple_repeat Simple_repeat 1 20 -96 1452 135 0 5 chr10 39351993 39352200 -100964565 + AluSg/x SINE Alu 82 287 -23 234 198 0 41 chr10 39352200 39352300 -100964465 + (TA)n Simple_repeat Simple_repeat 20 116 0 299 304 0 7 chr10 39352315 39352450 -100964315 + (TA)n Simple_repeat Simple_repeat 1 134 0 222 191 0 0 chr10 39352457 39352504 -100964261 + (TATG)n Simple_repeat Simple_repeat 2 48 0 1698 76 5 0 chr10 39352996 39353207 -100963558 - AluY SINE Alu -99 212 1 2022 251 98 32 chr10 39353208 39353684 -100963081 + L1ME3A LINE L1 4888 5331 -839 2178 88 3 3 chr10 39353684 39353978 -100962787 - AluY SINE Alu -17 294 1 2022 251 98 32 chr10 39353978 39354699 -100962066 + L1ME3A LINE L1 5331 6164 -6 2113 113 0 23 chr10 39356141 39356450 -100960315 + AluSp SINE Alu 1 302 -11 2120 116 7 0 chr10 39356454 39356756 -100960009 + AluSg SINE Alu 1 304 -6 1794 134 3 27 chr10 39356879 39357195 -100959570 + AluSx SINE Alu 1 309 0 1933 148 0 10 chr10 39357323 39357621 -100959144 + AluSx SINE Alu 6 300 -12 1738 162 0 46 chr10 39357745 39358072 -100958693 + AluJb SINE Alu 1 312 0 207 208 113 0 chr10 39358318 39358371 -100958394 - MIR SINE MIR -93 169 111 2011 123 0 36 chr10 39359915 39360223 -100956542 - AluSx SINE Alu -15 297 1 2156 113 3 10 chr10 39360266 39360567 -100956198 - AluSx SINE Alu -13 299 1 2248 68 7 4 chr10 39360856 39361160 -100955605 + AluY SINE Alu 1 305 0 621 314 33 12 chr10 39361679 39361924 -100954841 - LTR16B LTR ERVL -78 386 137 387 73 0 0 chr10 39362275 39362330 -100954435 + (TG)n Simple_repeat Simple_repeat 1 55 0 195 42 0 0 chr10 39362329 39362353 -100954412 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 440 358 53 22 chr10 39362561 39362974 -100953791 - HERVL LTR ERVL -849 4805 4380 293 393 0 0 chr10 39363013 39363153 -100953612 - HERVL LTR ERVL -1225 4260 4121 2076 93 41 0 chr10 39363289 39363579 -100953186 - AluSx SINE Alu -10 302 1 471 348 69 27 chr10 39363584 39363900 -100952865 - HERVL LTR ERVL -1275 3721 3369 2414 59 3 13 chr10 39363900 39364206 -100952559 - AluY SINE Alu -8 303 1 471 348 69 27 chr10 39364206 39364453 -100952312 - HERVL LTR ERVL -1627 3369 3134 553 293 44 4 chr10 39364532 39364761 -100952004 - HERVL LTR ERVL -2371 3283 3046 1491 258 113 11 chr10 39364898 39365665 -100951100 + L1ME1 LINE L1 5241 6094 -72 2372 85 0 0 chr10 39366372 39366679 -100950086 + AluY SINE Alu 1 307 -4 4046 134 15 126 chr10 39366840 39368387 -100948378 - pTR5 LTR ERV1 0 2606 1524 200 281 11 67 chr10 39368440 39368529 -100948236 - MIR SINE MIR -75 187 104 2361 71 0 3 chr10 39368530 39368827 -100947938 - AluY SINE Alu -15 296 1 2363 58 0 35 chr10 39370383 39370694 -100946071 + AluY SINE Alu 1 300 -11 331 67 0 0 chr10 39370750 39370795 -100945970 - Tigger3(Golem) DNA MER2_type -68 2961 2917 1873 158 10 0 chr10 39371011 39371302 -100945463 + AluSx SINE Alu 1 294 -18 611 137 0 0 chr10 39371341 39371436 -100945329 - AluS SINE Alu -218 95 1 226 62 0 0 chr10 39371493 39371525 -100945240 + AluSq SINE Alu 1 32 -269 1681 110 8 4 chr10 39371525 39371762 -100945003 + AluSq SINE Alu 76 313 0 534 276 69 23 chr10 39371841 39372015 -100944750 + MIR SINE MIR 3 184 -78 5345 147 75 44 chr10 39372096 39372414 -100944351 - Tigger3b DNA MER2_type -1797 1231 925 215 61 30 0 chr10 39372414 39372447 -100944318 + (TGAG)n Simple_repeat Simple_repeat 1 34 0 5345 147 75 44 chr10 39372447 39373001 -100943764 - Tigger3b DNA MER2_type -2103 925 308 1984 104 0 4 chr10 39373001 39373260 -100943505 + AluSq SINE Alu 1 258 -55 5345 147 75 44 chr10 39373260 39373578 -100943187 - Tigger3b DNA MER2_type -2720 308 2 214 244 35 58 chr10 39373593 39373679 -100943086 + L2 LINE L2 2371 2454 -860 2073 121 0 4 chr10 39373806 39374079 -100942686 - AluSx SINE Alu -22 290 19 192 308 164 27 chr10 39374334 39374480 -100942285 + MIR3 SINE MIR 12 177 -31 214 276 0 46 chr10 39374508 39374595 -100942170 - L2 LINE L2 -59 3254 3172 2298 97 3 0 chr10 39376019 39376319 -100940446 - AluY SINE Alu -10 301 1 566 102 0 34 chr10 39376822 39376940 -100939825 + (GGAA)n Simple_repeat Simple_repeat 2 115 0 343 0 43 0 chr10 39377322 39377369 -100939396 + (TC)n Simple_repeat Simple_repeat 2 50 0 1685 271 134 6 chr10 39377709 39378640 -100938125 - L1ME3A LINE L1 -30 6140 5089 234 0 0 0 chr10 39378664 39378690 -100938075 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 2448 98 0 0 chr10 39379519 39379825 -100936940 - AluSc SINE Alu -3 306 1 2377 53 3 13 chr10 39379834 39380133 -100936632 - AluY SINE Alu -15 296 1 26 30 0 0 chr10 39380139 39380172 -100936593 + AT_rich Low_complexity Low_complexity 1 33 0 1244 222 22 0 chr10 39380178 39380448 -100936317 - AluJo SINE Alu -36 276 1 2386 76 7 3 chr10 39380586 39380890 -100935875 + AluSg SINE Alu 1 305 -5 2397 59 3 3 chr10 39381479 39381786 -100934979 - AluY SINE Alu -4 307 1 597 28 0 0 chr10 39382268 39382339 -100934426 + (CA)n Simple_repeat Simple_repeat 2 72 0 25 51 0 0 chr10 39382719 39382758 -100934007 + AT_rich Low_complexity Low_complexity 1 39 0 1540 203 42 25 chr10 39383757 39384116 -100932649 + MLT1A1 LTR MaLR 1 365 0 183 383 34 7 chr10 39385183 39385332 -100931433 + L2 LINE L2 1818 1970 -1344 226 250 26 0 chr10 39385346 39385422 -100931343 - L1ME3A LINE L1 -12 6158 6081 27 0 0 0 chr10 39385521 39385548 -100931217 + AT_rich Low_complexity Low_complexity 1 27 0 23 54 0 0 chr10 39385643 39385680 -100931085 + AT_rich Low_complexity Low_complexity 1 37 0 311 289 0 0 chr10 39386269 39386352 -100930413 + MIR SINE MIR 25 107 -155 1099 255 79 43 chr10 39386388 39386858 -100929907 - MLT1D LTR MaLR 0 505 19 1067 257 97 9 chr10 39387433 39387886 -100928879 + MLT1D LTR MaLR 1 390 0 215 298 157 16 chr10 39387957 39388078 -100928687 - L2 LINE L2 -219 3053 2916 314 324 48 59 chr10 39388333 39388605 -100928160 - L2 LINE L2 -828 2486 2218 22 56 0 0 chr10 39389638 39389674 -100927091 + AT_rich Low_complexity Low_complexity 1 36 0 2235 88 10 0 chr10 39390141 39390438 -100926327 + AluSq SINE Alu 1 300 -13 402 21 0 0 chr10 39390458 39390505 -100926260 + (TG)n Simple_repeat Simple_repeat 2 48 0 1304 188 36 10 chr10 39391370 39391674 -100925091 - L1MA6 LINE L1 -13 6287 5976 2323 100 0 3 chr10 39392091 39392402 -100924363 + AluSg SINE Alu 1 310 0 309 283 123 9 chr10 39394853 39394959 -100921806 + L2 LINE L2 3193 3310 -3 389 185 12 25 chr10 39395346 39395427 -100921338 - MER3 DNA MER1_type -129 80 1 2186 102 0 7 chr10 39395508 39395803 -100920962 + AluSq SINE Alu 1 293 -20 21 0 0 0 chr10 39395841 39395862 -100920903 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr10 39395918 39395958 -100920807 + AT_rich Low_complexity Low_complexity 1 40 0 2341 63 7 3 chr10 39396067 39396370 -100920395 - AluY SINE Alu -2 309 6 1042 83 8 0 chr10 39396375 39396507 -100920258 - AluY SINE Alu -178 133 1 2389 82 0 3 chr10 39396521 39396827 -100919938 - AluY SINE Alu -6 305 1 971 229 23 29 chr10 39396861 39397167 -100919598 - L1MC3 LINE L1 -1493 6292 5989 586 201 34 117 chr10 39397182 39397229 -100919536 - L1MC3 LINE L1 -1965 5820 5771 297 0 0 0 chr10 39397229 39397262 -100919503 + (TG)n Simple_repeat Simple_repeat 1 33 0 586 201 34 117 chr10 39397262 39397404 -100919361 - L1MC3 LINE L1 -2014 5771 5662 1954 118 3 67 chr10 39397404 39397735 -100919030 + AluSx SINE Alu 1 310 -2 586 201 34 117 chr10 39397735 39397842 -100918923 - L1MC3 LINE L1 -2123 5662 5548 508 269 19 19 chr10 39397866 39398026 -100918739 - L1MC3 LINE L1 -2063 4083 3924 755 76 0 0 chr10 39398032 39398137 -100918628 + AluY SINE Alu 198 302 -9 1223 256 48 55 chr10 39398158 39398370 -100918395 - L1MC3 LINE L1 -2214 3932 3720 2189 84 30 10 chr10 39398370 39398669 -100918096 - AluY SINE Alu -6 305 1 1223 256 48 55 chr10 39398669 39398929 -100917836 - L1MC3 LINE L1 -2426 3720 3464 2162 97 3 7 chr10 39398929 39399228 -100917537 - AluSc SINE Alu -11 298 1 1223 256 48 55 chr10 39399228 39399448 -100917317 - L1MC3 LINE L1 -2682 3464 3244 22 0 0 0 chr10 39400134 39400156 -100916609 + AT_rich Low_complexity Low_complexity 1 22 0 2444 68 3 3 chr10 39400469 39400779 -100915986 + AluY SINE Alu 1 310 -1 21 57 0 0 chr10 39400796 39400831 -100915934 + AT_rich Low_complexity Low_complexity 1 35 0 2325 119 0 0 chr10 39401401 39401841 -100914924 + AluSg SINE Alu 1 440 0 1798 159 7 7 chr10 39402201 39402502 -100914263 - AluSx SINE Alu -11 301 1 479 213 44 38 chr10 39403844 39404027 -100912738 - LTR37B LTR ERV1 -29 439 256 3671 185 29 53 chr10 39404029 39404423 -100912342 + L1MB4 LINE L1 4905 5307 -873 2077 129 3 0 chr10 39404423 39404717 -100912048 + AluSq SINE Alu 1 295 -18 3671 185 29 53 chr10 39404717 39405474 -100911291 + L1MB4 LINE L1 5307 6025 -155 2072 149 0 0 chr10 39405474 39405770 -100910995 - AluSc SINE Alu -10 299 4 3671 185 29 53 chr10 39405770 39405885 -100910880 + L1MB4 LINE L1 6025 6141 -39 2062 133 3 16 chr10 39405927 39406235 -100910530 - AluSp SINE Alu -9 304 1 1268 226 111 46 chr10 39406615 39407121 -100909644 - L1MA7 LINE L1 -11 6280 5744 324 248 50 14 chr10 39407121 39407262 -100909503 + L1M LINE L1 5259 5404 -955 4032 167 92 31 chr10 39407262 39408711 -100908054 + pTR5 LTR ERV1 741 2438 0 558 196 128 34 chr10 39408735 39408970 -100907795 + L1MCa LINE L1 1711 1967 -4459 227 260 173 0 chr10 39409002 39409106 -100907659 + L1MCa LINE L1 2059 2180 -4246 1869 168 0 0 chr10 39409290 39409576 -100907189 + AluSx SINE Alu 1 286 -26 1455 94 10 5 chr10 39409676 39409877 -100906888 + AluSp SINE Alu 107 308 -5 2026 149 10 0 chr10 39409877 39410186 -100906579 + AluSx SINE Alu 1 312 0 2276 156 27 20 chr10 39410186 39410682 -100906083 + LTR49-int LTR ERV1 5262 5816 -633 482 467 130 11 chr10 39410706 39410976 -100905789 - AluJb SINE Alu 0 302 1 244 155 0 35 chr10 39411036 39411094 -100905671 + L1MCa LINE L1 3134 3189 -3237 2075 147 7 0 chr10 39411094 39411400 -100905365 + AluSc SINE Alu 1 308 -1 405 0 0 0 chr10 39411403 39411448 -100905317 + (GAAA)n Simple_repeat Simple_repeat 2 46 0 459 276 88 29 chr10 39411453 39411979 -100904786 + L1MCa LINE L1 3176 3732 -2694 850 216 39 86 chr10 39412094 39412496 -100904269 - MLT1A2 LTR MaLR 0 457 1 311 261 45 9 chr10 39412497 39412608 -100904157 + L1MCa LINE L1 3820 3934 -2492 283 230 31 126 chr10 39412607 39412933 -100903832 + L1MCa LINE L1 4874 5168 -1258 * 497 329 65 22 chr10 39412948 39413288 -100903477 - L2 LINE L2 -212 3101 2748 201 349 116 23 chr10 39413329 39413458 -100903307 + MIR3 SINE MIR 58 198 -10 1522 96 8 16 chr10 39413476 39413642 -100903123 - L1P LINE L1 -959 5187 5022 2225 93 33 7 chr10 39413642 39413942 -100902823 - AluSg SINE Alu -2 308 1 1522 96 8 16 chr10 39413942 39414026 -100902739 - L1P LINE L1 -1124 5022 4939 6697 75 7 15 chr10 39414026 39414626 -100902139 + L1PA8 LINE L1 5184 5774 -398 2452 81 3 0 chr10 39414626 39414933 -100901832 + AluY SINE Alu 1 308 -3 6697 75 7 15 chr10 39414933 39415324 -100901441 + L1PA8 LINE L1 5774 6167 -5 555 56 0 0 chr10 39415328 39415399 -100901366 + (TA)n Simple_repeat Simple_repeat 2 72 0 2301 84 3 0 chr10 39416642 39416939 -100899826 + AluSx SINE Alu 1 298 -14 1267 175 58 5 chr10 39416972 39417285 -100899480 + MER33 DNA MER1_type 1 314 -10 2003 148 0 0 chr10 39417739 39418043 -100898722 - AluSx SINE Alu -8 304 1 2445 74 0 0 chr10 39418367 39418666 -100898099 + AluY SINE Alu 1 299 -12 218 250 231 0 chr10 39419283 39419387 -100897378 - MIR SINE MIR -121 141 14 2419 80 0 0 chr10 39419800 39420099 -100896666 - AluY SINE Alu -12 299 1 24 32 0 0 chr10 39420763 39420794 -100895971 + AT_rich Low_complexity Low_complexity 1 31 0 379 212 106 8 chr10 39422004 39422136 -100894629 + MIR SINE MIR 118 262 0 599 191 0 0 chr10 39422269 39422374 -100894391 + AluJb SINE Alu 184 288 -24 1968 116 11 11 chr10 39422395 39422679 -100894086 - AluSg SINE Alu -26 284 1 21 36 0 0 chr10 39422679 39422707 -100894058 + AT_rich Low_complexity Low_complexity 1 28 0 201 74 0 0 chr10 39424487 39424514 -100892251 + (TC)n Simple_repeat Simple_repeat 2 28 0 200 233 0 0 chr10 39424618 39424661 -100892104 + T-rich Low_complexity Low_complexity 1 43 0 289 304 16 8 chr10 39425276 39425401 -100891364 - L1MEc LINE L1 -2621 3761 3636 311 327 13 40 chr10 39425590 39425740 -100891025 + MLT1H LTR MaLR 209 354 -195 26 0 0 0 chr10 39425959 39425985 -100890780 + AT_rich Low_complexity Low_complexity 1 26 0 1664 50 0 5 chr10 39426006 39426205 -100890560 - AluY SINE Alu -113 198 1 24 0 0 0 chr10 39426394 39426418 -100890347 + AT_rich Low_complexity Low_complexity 1 24 0 26 30 0 0 chr10 39426467 39426500 -100890265 + AT_rich Low_complexity Low_complexity 1 33 0 470 300 29 19 chr10 39426531 39426741 -100890024 - L1MEc LINE L1 -3301 3081 2870 2036 109 51 10 chr10 39426743 39427037 -100889728 - AluSx SINE Alu -6 306 1 2015 134 7 3 chr10 39427177 39427467 -100889298 + AluSc SINE Alu 1 291 -18 2354 71 0 0 chr10 39427715 39428034 -100888731 - AluSg SINE Alu 0 319 1 1593 108 97 41 chr10 39428233 39428531 -100888234 - AluSx SINE Alu 0 313 1 415 340 115 55 chr10 39428954 39429154 -100887611 - L1MEc LINE L1 -4701 1799 1612 2433 77 0 3 chr10 39429154 39429453 -100887312 - AluY SINE Alu -13 298 1 415 340 115 55 chr10 39429453 39429796 -100886969 - L1MEc LINE L1 -4888 1612 1092 1594 111 77 0 chr10 39429796 39430030 -100886735 - AluSc SINE Alu -57 252 1 415 340 115 55 chr10 39430030 39430137 -100886628 - L1MEc LINE L1 -5408 1092 993 2028 128 7 0 chr10 39430318 39430616 -100886149 - AluSx SINE Alu -12 300 1 394 319 69 84 chr10 39430877 39431197 -100885568 - L1MEc LINE L1 -5724 648 334 26 0 0 0 chr10 39431201 39431227 -100885538 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr10 39431848 39431876 -100884889 + AT_rich Low_complexity Low_complexity 1 28 0 1825 124 4 0 chr10 39432616 39432875 -100883890 + AluSx SINE Alu 38 297 -15 2101 104 7 4 chr10 39433094 39433419 -100883346 - AluSc SINE Alu 0 326 1 699 65 11 0 chr10 39434020 39434143 -100882622 + AluSg/x SINE Alu 193 316 0 221 214 34 146 chr10 39434701 39434790 -100881975 + L2 LINE L2 3234 3312 -1 1065 147 0 0 chr10 39435026 39435208 -100881557 - AluSg/x SINE Alu 0 309 128 1757 187 0 0 chr10 39435282 39435581 -100881184 - AluJo SINE Alu -13 299 1 21 57 0 0 chr10 39435653 39435688 -100881077 + AT_rich Low_complexity Low_complexity 1 35 0 216 0 0 0 chr10 39435876 39435900 -100880865 + (TG)n Simple_repeat Simple_repeat 1 24 0 2036 141 10 0 chr10 39435901 39436200 -100880565 - AluSq SINE Alu -11 302 1 1683 158 30 33 chr10 39436202 39436505 -100880260 - AluJb SINE Alu -10 302 1 2744 12 0 25 chr10 39436982 39437301 -100879464 + AluY SINE Alu 1 311 0 209 233 0 0 chr10 39437512 39437555 -100879210 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 212 290 103 56 chr10 39437563 39437670 -100879095 - L2 LINE L2 -12 3301 3190 733 169 8 0 chr10 39439858 39439976 -100876789 + FLAM_C SINE Alu 3 121 -12 505 131 0 24 chr10 39440006 39440090 -100876675 + AluJb SINE Alu 212 293 -19 301 276 9 57 chr10 39440194 39440299 -100876466 + L2 LINE L2 2221 2320 -994 270 284 67 45 chr10 39440498 39440632 -100876133 + L2 LINE L2 2644 2780 -534 1352 136 0 5 chr10 39441053 39441274 -100875491 - pTR5 LTR ERV1 -2047 391 172 268 276 10 0 chr10 39441277 39441375 -100875390 - LTR30 LTR ERV1 -80 642 544 4730 146 75 27 chr10 39441376 39442467 -100874298 - pTR5 LTR ERV1 -439 1798 57 29 70 0 0 chr10 39442552 39442609 -100874156 + AT_rich Low_complexity Low_complexity 1 57 0 660 150 60 51 chr10 39442753 39442952 -100873813 - MER6 DNA MER2_type 0 865 -65 243 0 0 0 chr10 39443187 39443214 -100873551 + (TG)n Simple_repeat Simple_repeat 2 28 0 1228 163 6 137 chr10 39443384 39443721 -100873044 + AluJb SINE Alu 10 302 -10 2420 64 0 13 chr10 39444469 39444780 -100871985 - AluY SINE Alu -4 307 1 376 282 112 12 chr10 39445568 39445738 -100871027 + MIR SINE MIR 21 207 -55 857 219 0 12 chr10 39447061 39447221 -100869544 + FRAM SINE Alu 2 159 -7 2436 81 0 3 chr10 39447590 39447900 -100868865 - AluY SINE Alu 0 311 3 2128 98 0 33 chr10 39448353 39448659 -100868106 - AluSc SINE Alu -13 296 1 21 57 0 0 chr10 39448670 39448705 -100868060 + AT_rich Low_complexity Low_complexity 1 35 0 2474 63 0 7 chr10 39448857 39449158 -100867607 + AluY SINE Alu 1 299 -12 1466 106 20 0 chr10 39449158 39449357 -100867408 + AluSg/x SINE Alu 79 281 -31 378 0 0 0 chr10 39449359 39449401 -100867364 + (CA)n Simple_repeat Simple_repeat 2 43 0 2141 115 0 13 chr10 39449569 39449874 -100866891 - AluSx SINE Alu -11 301 1 215 377 26 45 chr10 39450326 39450480 -100866285 - L2 LINE L2 -27 3245 3095 256 242 0 0 chr10 39450718 39450780 -100865985 + MER112 DNA MER1_type 11 72 -188 1911 119 0 7 chr10 39450895 39451208 -100865557 - AluSx SINE Alu 0 311 1 1952 233 45 48 chr10 39451208 39451877 -100864888 + MER31-int LTR ERV1 297 963 -3973 1628 159 106 22 chr10 39452198 39452556 -100864209 + MER67A LTR ERV1 156 543 0 561 310 163 33 chr10 39452749 39453239 -100863526 - L2 LINE L2 -923 2391 1838 198 323 8 60 chr10 39453349 39453482 -100863283 - L2 LINE L2 -590 2724 2599 22 35 0 0 chr10 39453865 39453894 -100862871 + AT_rich Low_complexity Low_complexity 1 29 0 2210 90 7 16 chr10 39454943 39455253 -100861512 - AluSp SINE Alu 0 313 7 857 219 0 12 chr10 39455703 39455863 -100860902 - FRAM SINE Alu -7 159 2 376 282 112 12 chr10 39457186 39457356 -100859409 - MIR SINE MIR -55 207 21 2350 68 3 13 chr10 39458143 39458453 -100858312 + AluY SINE Alu 1 307 -4 1222 163 6 139 chr10 39459200 39459538 -100857227 - AluJb SINE Alu -10 302 10 243 0 0 0 chr10 39459708 39459735 -100857030 + (CA)n Simple_repeat Simple_repeat 2 28 0 660 150 60 51 chr10 39459970 39460169 -100856596 + MER6 DNA MER2_type -65 865 0 29 70 0 0 chr10 39460313 39460370 -100856395 + AT_rich Low_complexity Low_complexity 1 57 0 4698 146 76 26 chr10 39460455 39461544 -100855221 + pTR5 LTR ERV1 57 275 -439 270 258 21 0 chr10 39461545 39461642 -100855123 + LTR30 LTR ERV1 544 642 -80 1344 140 0 5 chr10 39461645 39461866 -100854899 + pTR5 LTR ERV1 172 391 -2047 270 284 67 45 chr10 39462287 39462421 -100854344 - L2 LINE L2 -534 2780 2644 301 276 9 57 chr10 39462620 39462725 -100854040 - L2 LINE L2 -994 2320 2221 505 131 0 24 chr10 39462829 39462913 -100853852 - AluJb SINE Alu -19 293 212 733 169 8 0 chr10 39462943 39463061 -100853704 - FLAM_C SINE Alu -12 121 3 212 290 103 56 chr10 39465249 39465356 -100851409 + L2 LINE L2 3190 3301 -12 209 233 0 0 chr10 39465364 39465407 -100851358 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 2792 16 0 0 chr10 39465618 39465929 -100850836 - AluY SINE Alu 0 311 1 1683 158 30 33 chr10 39466406 39466709 -100850056 + AluJb SINE Alu 1 302 -10 2036 141 10 0 chr10 39466711 39467010 -100849755 + AluSq SINE Alu 1 302 -11 216 0 0 0 chr10 39467011 39467035 -100849730 + (CA)n Simple_repeat Simple_repeat 1 24 0 21 57 0 0 chr10 39467223 39467258 -100849507 + AT_rich Low_complexity Low_complexity 1 35 0 1757 187 0 0 chr10 39467330 39467629 -100849136 + AluJo SINE Alu 1 299 -13 1066 147 0 0 chr10 39467703 39467885 -100848880 + AluSg/x SINE Alu 130 311 0 207 225 34 146 chr10 39468121 39468210 -100848555 - L2 LINE L2 -1 3312 3234 698 65 11 0 chr10 39468768 39468891 -100847874 - AluSg/x SINE Alu 0 314 191 2234 111 3 3 chr10 39469492 39469789 -100846976 + AluSc SINE Alu 1 297 -12 242 220 68 0 chr10 39469896 39469955 -100846810 - L2 LINE L2 -1 3271 3209 526 239 29 58 chr10 39470154 39470359 -100846406 - MER20 DNA MER1_type -20 199 1 223 93 256 0 chr10 39470701 39470744 -100846021 + MIR3 SINE MIR 122 175 -33 215 344 54 11 chr10 39470863 39470956 -100845809 + L2 LINE L2 3172 3268 -4 211 206 33 98 chr10 39471142 39471234 -100845531 + L3 LINE CR1 1326 1411 -166 229 236 56 14 chr10 39471237 39471309 -100845456 + MIR SINE MIR 119 193 -69 438 311 47 16 chr10 39471701 39471891 -100844874 + MIR SINE MIR 21 216 -46 1752 164 33 41 chr10 39471936 39472302 -100844463 - MLT1A1 LTR MaLR -2 363 1 180 200 0 0 chr10 39472430 39472470 -100844295 + GA-rich Low_complexity Low_complexity 2 41 0 1415 222 26 36 chr10 39473024 39473443 -100843322 + MLT1C LTR MaLR 53 467 0 1411 200 8 95 chr10 39473940 39474340 -100842425 + MLT1A1 LTR MaLR 1 365 0 207 219 0 0 chr10 39474344 39474385 -100842380 + MIR3 SINE MIR 115 155 -53 2163 84 3 39 chr10 39476051 39476359 -100840406 - AluY SINE Alu -14 297 1 201 74 0 0 chr10 39476832 39476859 -100839906 + (A)n Simple_repeat Simple_repeat 1 27 0 2308 126 3 50 chr10 39477273 39477578 -100839187 + THE1B LTR MaLR 1 286 -78 2161 101 0 54 chr10 39477578 39477894 -100838871 - AluSq SINE Alu -14 299 1 2308 126 3 50 chr10 39477894 39477970 -100838795 + THE1B LTR MaLR 286 364 0 216 346 23 38 chr10 39478005 39478138 -100838627 + MIR SINE MIR 122 252 -10 2388 91 0 0 chr10 39478884 39479182 -100837583 + AluY SINE Alu 1 298 -13 27 0 0 0 chr10 39479507 39479534 -100837231 + AT_rich Low_complexity Low_complexity 1 27 0 1809 119 0 12 chr10 39480028 39480280 -100836485 + AluSc SINE Alu 1 249 -60 286 247 0 12 chr10 39480404 39480489 -100836276 + (TA)n Simple_repeat Simple_repeat 1 84 0 25 0 0 0 chr10 39480851 39480876 -100835889 + AT_rich Low_complexity Low_complexity 1 25 0 194 339 46 0 chr10 39482294 39482359 -100834406 - L2 LINE L2 -5 3308 3241 201 321 0 0 chr10 39482509 39482565 -100834200 - L2 LINE L2 -217 3055 3000 2276 105 0 0 chr10 39483410 39483735 -100833030 - L1P4 LINE L1 -398 5765 5441 1554 109 47 33 chr10 39483735 39484005 -100832760 + L1PA13 LINE L1 5868 6145 -18 215 203 17 0 chr10 39484268 39484327 -100832438 + (CA)n Simple_repeat Simple_repeat 2 61 0 470 318 32 26 chr10 39484384 39484573 -100832192 + MIR SINE MIR 58 247 -15 215 338 61 47 chr10 39484728 39484876 -100831889 - L2 LINE L2 -17 3255 3106 342 336 114 0 chr10 39486335 39486466 -100830299 - MIR3 SINE MIR -9 199 54 2460 61 3 0 chr10 39486757 39487054 -100829711 + AluY SINE Alu 5 302 -9 643 249 37 6 chr10 39487186 39487462 -100829303 + MER2 DNA MER2_type 1 344 -1 340 263 74 0 chr10 39488571 39488666 -100828099 + L2 LINE L2 3208 3309 -4 1346 145 41 5 chr10 39488746 39488967 -100827798 - MER30 DNA MER1_type 0 230 2 2215 84 61 7 chr10 39489331 39489628 -100827137 - AluSq SINE Alu 0 313 1 349 347 72 0 chr10 39490758 39490925 -100825840 - MIR SINE MIR -8 254 76 275 50 25 0 chr10 39491507 39491547 -100825218 - MADE1 DNA Mariner -39 41 1 1298 263 49 7 chr10 39492637 39493048 -100823717 + MER57B LTR ERV1 1 428 -6 727 251 48 91 chr10 39493085 39493523 -100823242 - MLT1J1 LTR MaLR 0 446 28 339 44 0 0 chr10 39493642 39493687 -100823078 + (TG)n Simple_repeat Simple_repeat 2 46 0 229 271 173 38 chr10 39493745 39493878 -100822887 + MIR SINE MIR 4 154 -108 1661 230 38 26 chr10 39494055 39494586 -100822179 - L1ME1 LINE L1 -5 6161 5625 225 313 53 52 chr10 39494839 39495060 -100821705 - MIR SINE MIR -14 248 30 21 100 0 0 chr10 39495864 39495934 -100820831 + AT_rich Low_complexity Low_complexity 1 70 0 345 250 171 24 chr10 39496069 39496233 -100820532 + MIR SINE MIR 3 190 -72 330 273 8 31 chr10 39497400 39497528 -100819237 + GA-rich Low_complexity Low_complexity 3 127 0 401 282 82 33 chr10 39498137 39498382 -100818383 + MIR SINE MIR 3 259 -3 6881 51 21 2 chr10 39498724 39499939 -100816826 + L1PA6 LINE L1 4921 6152 -2 584 214 124 126 chr10 39499970 39500169 -100816596 - MLT1E2 LTR MaLR -289 365 122 2328 65 0 29 chr10 39500354 39500664 -100816101 + AluY SINE Alu 1 301 -10 2165 123 3 3 chr10 39500762 39501072 -100815693 - AluSp SINE Alu -3 310 1 21 0 0 0 chr10 39501073 39501094 -100815671 + AT_rich Low_complexity Low_complexity 1 21 0 335 245 43 32 chr10 39501253 39501347 -100815418 + MER5A DNA MER1_type 12 106 -83 276 340 35 40 chr10 39501481 39501585 -100815180 - MIR SINE MIR -10 252 148 2282 109 13 0 chr10 39501585 39501888 -100814877 - AluSx SINE Alu -5 307 1 276 340 35 40 chr10 39501888 39501983 -100814782 - MIR SINE MIR -114 148 54 218 330 73 46 chr10 39502237 39502346 -100814419 + MIR SINE MIR 151 262 0 191 302 0 0 chr10 39502656 39502699 -100814066 + L2 LINE L2 3209 3251 -21 195 314 189 7 chr10 39503453 39503606 -100813159 + MIR SINE MIR 50 230 -32 194 83 56 0 chr10 39503719 39503755 -100813010 + (TCTCTG)n Simple_repeat Simple_repeat 4 41 0 466 349 64 18 chr10 39504002 39504220 -100812545 - MIR SINE MIR -4 258 31 2227 89 0 0 chr10 39504974 39505255 -100811510 + AluY SINE Alu 12 292 -19 39770 58 4 8 chr10 39505262 39507118 -100809647 + L1PA4 LINE L1 11 1874 -4281 4505 35 4 0 chr10 39507118 39507658 -100809107 - L1PA2 LINE L1 -4 6151 5610 39770 58 4 8 chr10 39507658 39511975 -100804790 + L1PA4 LINE L1 1874 6151 -4 260 300 73 38 chr10 39512746 39512900 -100803865 + MIR3 SINE MIR 13 174 -63 1852 181 32 3 chr10 39513267 39513605 -100803160 - MER7A DNA MER2_type 0 346 1 2417 73 0 0 chr10 39514057 39514357 -100802408 + AluY SINE Alu 1 300 -11 1196 245 68 91 chr10 39514416 39515432 -100801333 + L1MC4 LINE L1 7060 7995 0 258 327 82 31 chr10 39516639 39516715 -100800050 - L2 LINE L2 -11 3302 3231 2735 132 5 30 chr10 39516715 39517154 -100799611 + MSTA LTR MaLR 1 428 0 258 327 82 31 chr10 39517154 39517236 -100799529 - L2 LINE L2 -82 3231 3136 1437 167 155 20 chr10 39517551 39517893 -100798872 + MLT1B LTR MaLR 1 388 -2 25 0 0 0 chr10 39518153 39518178 -100798587 + AT_rich Low_complexity Low_complexity 1 25 0 212 276 0 23 chr10 39518699 39518786 -100797979 + (TA)n Simple_repeat Simple_repeat 2 86 0 29 28 0 0 chr10 39518933 39518969 -100797796 + AT_rich Low_complexity Low_complexity 1 36 0 393 191 0 0 chr10 39519037 39519142 -100797623 + (CA)n Simple_repeat Simple_repeat 1 105 0 39107 51 7 0 chr10 39520365 39525520 -100791245 + L1P LINE L1 2 5190 -956 201 349 116 23 chr10 39525536 39525665 -100791100 - MIR3 SINE MIR -10 198 58 497 329 65 22 chr10 39525706 39526046 -100790719 + L2 LINE L2 2748 3101 -212 283 230 31 126 chr10 39526061 39526387 -100790378 - L1M4 LINE L1 -1258 4888 4594 * 311 261 45 9 chr10 39526386 39526497 -100790268 - L1M4 LINE L1 -2492 3654 3540 850 216 39 86 chr10 39526498 39526900 -100789865 + MLT1A2 LTR MaLR 1 457 0 459 276 88 29 chr10 39527015 39527541 -100789224 - L1M4 LINE L1 -2694 3452 2896 369 0 0 0 chr10 39527546 39527587 -100789178 + (TTTC)n Simple_repeat Simple_repeat 2 42 0 2053 150 7 0 chr10 39527590 39527896 -100788869 - AluSc SINE Alu -1 308 1 244 155 0 35 chr10 39527896 39527954 -100788811 - L1M4 LINE L1 -3237 2909 2854 1805 172 0 3 chr10 39528014 39528317 -100788448 + AluJb SINE Alu 1 302 -10 315 0 0 0 chr10 39528366 39528401 -100788364 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1980 118 25 0 chr10 39528410 39528690 -100788075 - AluSx SINE Alu -21 291 5 503 283 34 42 chr10 39528702 39528734 -100788031 - L1M4 LINE L1 -3326 2820 2789 453 36 0 0 chr10 39528734 39528789 -100787976 + (TA)n Simple_repeat Simple_repeat 1 55 0 503 283 34 42 chr10 39528789 39528844 -100787921 - L1M4 LINE L1 -3357 2789 2735 1701 151 34 14 chr10 39528844 39529136 -100787629 - AluJb SINE Alu -14 298 1 503 283 34 42 chr10 39529136 39529312 -100787453 - L1M4 LINE L1 -3411 2735 2558 449 248 45 41 chr10 39529379 39529708 -100787057 + MLT1C LTR MaLR 54 467 0 * 3566 181 23 20 chr10 39529706 39530236 -100786529 + Tigger2 DNA MER2_type 1 535 -2183 2022 120 53 0 chr10 39530236 39530520 -100786245 + AluSq SINE Alu 1 299 -14 3566 181 23 20 chr10 39530520 39530731 -100786034 + Tigger2 DNA MER2_type 535 744 -1974 1117 153 22 18 chr10 39530794 39531023 -100785742 + Tigger2 DNA MER2_type 2464 2693 -25 569 254 12 12 chr10 39531043 39531287 -100785478 - L1M4 LINE L1 -3646 2500 2257 * 5611 200 38 30 chr10 39531285 39533316 -100783449 - L1MB1 LINE L1 -200 5989 3940 2011 159 27 14 chr10 39533316 39533686 -100783079 - THE1C LTR MaLR 0 375 1 5611 200 38 30 chr10 39533686 39533778 -100782987 - L1MB1 LINE L1 -2249 3940 3850 2718 48 3 0 chr10 39533778 39534113 -100782652 + L1PA4 LINE L1 5820 6155 0 1052 311 94 24 chr10 39535378 39535879 -100780886 - MLT1H LTR MaLR 0 549 14 180 347 196 21 chr10 39535933 39536316 -100780449 + L2 LINE L2 627 1076 -2238 1446 173 53 50 chr10 39536387 39536688 -100780077 + AluJo SINE Alu 11 312 0 180 0 0 0 chr10 39536959 39536979 -100779786 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1256 223 37 7 chr10 39537939 39538208 -100778557 + AluJb SINE Alu 7 283 -29 210 71 0 0 chr10 39538208 39538236 -100778529 + (AAATG)n Simple_repeat Simple_repeat 3 30 0 524 236 0 39 chr10 39538252 39538379 -100778386 + FLAM_A SINE Alu 6 127 -15 1655 156 46 23 chr10 39538999 39539301 -100777464 - AluJb SINE Alu 0 312 4 2201 117 0 3 chr10 39539674 39539973 -100776792 + AluSx SINE Alu 1 298 -14 2201 85 0 36 chr10 39540227 39540533 -100776232 - AluY SINE Alu -15 296 2 27 62 0 0 chr10 39540789 39540837 -100775928 + AT_rich Low_complexity Low_complexity 1 48 0 2171 102 0 3 chr10 39540991 39541324 -100775441 + AluY SINE Alu 1 332 0 505 215 71 92 chr10 39541527 39541853 -100774912 + MER114 LTR ERV 46 364 -284 2251 102 0 7 chr10 39542036 39542340 -100774425 - AluSg SINE Alu -8 302 1 595 140 10 0 chr10 39543831 39543931 -100772834 + MLT1E1 LTR MaLR 523 623 -31 1597 220 40 14 chr10 39544034 39544457 -100772308 + MER31B LTR ERV1 2 435 -31 2542 57 0 0 chr10 39546590 39546889 -100769876 + AluY SINE Alu 1 299 -12 292 259 33 33 chr10 39546950 39547154 -100769611 + L1ME LINE L1 5691 5894 -276 2084 123 0 0 chr10 39547258 39547551 -100769214 - AluSq SINE Alu -8 305 13 1942 92 0 4 chr10 39547552 39547802 -100768963 - AluSx SINE Alu -63 249 1 450 294 65 49 chr10 39547881 39548065 -100768700 + MIR SINE MIR 8 194 -68 2120 103 10 3 chr10 39548237 39548527 -100768238 + AluSq SINE Alu 1 292 -21 1101 157 131 0 chr10 39548667 39548858 -100767907 + AluJo SINE Alu 82 297 -15 2134 101 7 7 chr10 39550909 39551216 -100765549 + AluY SINE Alu 1 307 -4 2402 57 0 23 chr10 39551346 39551647 -100765118 - AluY SINE Alu -17 294 1 250 313 0 38 chr10 39552039 39552160 -100764605 - LTR67 LTR ERVL -23 534 417 640 219 8 0 chr10 39552160 39552279 -100764486 + FLAM_A SINE Alu 1 120 -13 1771 218 34 8 chr10 39552549 39552935 -100763830 - MSTD LTR MaLR 0 396 1 264 256 13 0 chr10 39553440 39553518 -100763247 + ERVL LTR ERVL 2744 2822 -2942 546 297 161 0 chr10 39553526 39553681 -100763084 + MER5A DNA MER1_type 9 188 -1 430 320 17 0 chr10 39553982 39554154 -100762611 + MIR SINE MIR 73 247 -15 942 218 39 4 chr10 39556134 39556391 -100760374 + L1MC3 LINE L1 7513 7778 -7 21 0 0 0 chr10 39556402 39556423 -100760342 + AT_rich Low_complexity Low_complexity 1 21 0 23 78 0 0 chr10 39556796 39556847 -100759918 + AT_rich Low_complexity Low_complexity 1 51 0 218 179 0 0 chr10 39557092 39557131 -100759634 + GA-rich Low_complexity Low_complexity 2 40 0 228 35 0 0 chr10 39557507 39557536 -100759229 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 25 31 0 0 chr10 39557689 39557721 -100759044 + AT_rich Low_complexity Low_complexity 1 32 0 33 0 0 0 chr10 39557761 39557794 -100758971 + AT_rich Low_complexity Low_complexity 1 33 0 2196 113 3 10 chr10 39558353 39558664 -100758101 - AluSc SINE Alu 0 309 1 1613 171 49 11 chr10 39559173 39559460 -100757305 + AluJo SINE Alu 1 298 -14 848 292 73 27 chr10 39560393 39560655 -100756110 - MLT1J LTR MaLR -10 501 253 238 67 44 0 chr10 39560655 39560700 -100756065 + A-rich Low_complexity Low_complexity 2 48 0 848 292 73 27 chr10 39560700 39560916 -100755849 - MLT1J LTR MaLR -258 253 1 2188 112 0 3 chr10 39561118 39561413 -100755352 + AluSq SINE Alu 1 294 -19 234 310 0 10 chr10 39561723 39561823 -100754942 + (TA)n Simple_repeat Simple_repeat 1 99 0 258 206 29 0 chr10 39562194 39562262 -100754503 + LTR24C LTR ERV1 556 625 -10 2279 104 0 16 chr10 39564221 39564538 -100752227 + AluSx SINE Alu 1 312 0 270 299 28 0 chr10 39564604 39564748 -100752017 + (TATATG)n Simple_repeat Simple_repeat 5 152 0 * 293 242 10 10 chr10 39564666 39564765 -100752000 + (TA)n Simple_repeat Simple_repeat 2 100 0 2165 191 63 35 chr10 39564765 39565340 -100751425 - LTR49 LTR ERV1 0 595 5 189 74 0 0 chr10 39565343 39565370 -100751395 + (TG)n Simple_repeat Simple_repeat 2 28 0 217 241 12 24 chr10 39565972 39566055 -100750710 + (TG)n Simple_repeat Simple_repeat 2 83 0 * 275 341 18 6 chr10 39566025 39566192 -100750573 + (TATATG)n Simple_repeat Simple_repeat 4 172 0 * 346 287 16 0 chr10 39566078 39566207 -100750558 + (TA)n Simple_repeat Simple_repeat 2 132 0 206 213 27 13 chr10 39566277 39566352 -100750413 + (TTTA)n Simple_repeat Simple_repeat 3 78 0 1899 112 0 8 chr10 39566957 39567217 -100749548 - AluSx SINE Alu -14 298 41 332 289 15 0 chr10 39567824 39567959 -100748806 + (TA)n Simple_repeat Simple_repeat 1 137 0 297 51 0 0 chr10 39567960 39567999 -100748766 + (TAGA)n Simple_repeat Simple_repeat 3 41 0 183 129 0 0 chr10 39568063 39568094 -100748671 + (TA)n Simple_repeat Simple_repeat 1 31 0 251 154 15 0 chr10 39568884 39568949 -100747816 + (TA)n Simple_repeat Simple_repeat 1 66 0 24 77 0 0 chr10 39569161 39569213 -100747552 + AT_rich Low_complexity Low_complexity 1 52 0 40749 48 6 1 chr10 39569720 39575839 -100740926 - L1PA4 LINE L1 -1 6154 2 411 187 0 0 chr10 39577062 39577169 -100739596 + (TG)n Simple_repeat Simple_repeat 1 107 0 29 28 0 0 chr10 39577237 39577273 -100739492 + AT_rich Low_complexity Low_complexity 1 36 0 212 276 0 23 chr10 39577420 39577507 -100739258 + (TA)n Simple_repeat Simple_repeat 2 86 0 25 0 0 0 chr10 39578028 39578053 -100738712 + AT_rich Low_complexity Low_complexity 1 25 0 1437 167 155 20 chr10 39578313 39578655 -100738110 - MLT1B LTR MaLR -2 388 1 258 327 82 31 chr10 39578970 39579052 -100737713 + L2 LINE L2 3136 3212 -101 2735 132 5 30 chr10 39579052 39579491 -100737274 - MSTA LTR MaLR 0 428 1 258 327 82 31 chr10 39579491 39579567 -100737198 + L2 LINE L2 3212 3302 -11 1143 245 72 92 chr10 39580774 39581786 -100734979 - L1MD3 LINE L1 0 8041 7060 2417 73 0 0 chr10 39581845 39582145 -100734620 - AluY SINE Alu -11 300 1 1852 181 32 3 chr10 39582597 39582935 -100733830 + MER7A DNA MER2_type 1 346 0 260 300 73 38 chr10 39583302 39583456 -100733309 - MIR3 SINE MIR -63 145 13 27068 46 4 3 chr10 39584227 39588559 -100728206 - L1PA4 LINE L1 -4 6151 1822 24 32 0 0 chr10 39588980 39589011 -100727754 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr10 39589449 39589470 -100727295 + (T)n Simple_repeat Simple_repeat 1 21 0 2229 101 0 10 chr10 39589773 39590080 -100726685 - AluSq SINE Alu -9 304 1 28 0 0 0 chr10 39590508 39590536 -100726229 + AT_rich Low_complexity Low_complexity 1 28 0 214 319 43 35 chr10 39590543 39590659 -100726106 + L2 LINE L2 2719 2835 -479 372 209 52 67 chr10 39590930 39591064 -100725701 - Charlie1 DNA MER1_type -959 1802 1671 22 56 0 0 chr10 39591847 39591883 -100724882 + AT_rich Low_complexity Low_complexity 1 36 0 2388 87 0 0 chr10 39592345 39592645 -100724120 + AluSq SINE Alu 1 300 -13 1570 180 3 21 chr10 39592650 39592989 -100723776 + L1MA5 LINE L1 5968 6300 0 200 336 78 35 chr10 39593220 39593336 -100723429 + MIR SINE MIR 20 140 -68 2063 128 7 3 chr10 39593519 39593816 -100722949 - AluSg SINE Alu -12 298 1 659 234 89 101 chr10 39593951 39594211 -100722554 + LTR24B LTR ERV1 150 405 -171 2408 60 0 16 chr10 39594211 39594525 -100722240 + AluY SINE Alu 1 309 -2 659 234 89 101 chr10 39594525 39594692 -100722073 + LTR24B LTR ERV1 405 572 -4 5118 192 75 35 chr10 39594740 39595726 -100721039 - L1MC3 LINE L1 -11 7774 6714 2257 105 7 0 chr10 39595726 39596021 -100720744 + AluSq SINE Alu 1 297 -16 5118 192 75 35 chr10 39596021 39596448 -100720317 - L1MC3 LINE L1 -1071 6714 6305 466 141 26 0 chr10 39596456 39596612 -100720153 + CT-rich Low_complexity Low_complexity 1 160 0 1843 121 66 0 chr10 39596612 39596869 -100719896 - AluSq SINE Alu -31 282 9 237 65 0 0 chr10 39596883 39596914 -100719851 + (TCTCC)n Simple_repeat Simple_repeat 5 35 0 2043 118 3 0 chr10 39597020 39597308 -100719457 + AluSx SINE Alu 23 311 -1 2281 98 0 43 chr10 39597342 39597667 -100719098 + AluSq SINE Alu 1 311 -2 1645 189 3 0 chr10 39597991 39598276 -100718489 + AluSq SINE Alu 2 287 -26 32 0 0 0 chr10 39598276 39598308 -100718457 + AT_rich Low_complexity Low_complexity 1 32 0 319 273 96 60 chr10 39599008 39599542 -100717223 - HAL1 LINE L1 -744 1763 1211 338 307 57 21 chr10 39599833 39599973 -100716792 - HAL1 LINE L1 -1606 901 757 512 16 0 0 chr10 39599999 39600063 -100716702 + L1PA4 LINE L1 6089 6152 -3 433 115 0 0 chr10 39600261 39600322 -100716443 - AluS SINE Alu -250 61 1 181 284 116 21 chr10 39601732 39601827 -100714938 - MIR SINE MIR -76 186 83 2183 110 7 0 chr10 39603214 39603523 -100713242 + AluY SINE Alu 1 311 0 2111 132 0 0 chr10 39604428 39604717 -100712048 - AluSg SINE Alu -21 289 1 255 157 0 0 chr10 39604959 39605010 -100711755 + (TTCA)n Simple_repeat Simple_repeat 2 52 0 250 278 106 40 chr10 39605027 39605178 -100711587 - L2 LINE L2 -17 3296 3136 3536 216 37 24 chr10 39605538 39606268 -100710497 + L1MC3 LINE L1 6016 6762 -1023 1300 213 114 21 chr10 39606268 39606602 -100710163 + MLT1A1 LTR MaLR 1 365 0 3536 216 37 24 chr10 39606602 39606781 -100709984 + L1MC3 LINE L1 6762 6937 -848 2152 104 0 11 chr10 39607397 39607717 -100709048 + AluSx SINE Alu 1 317 0 434 290 59 35 chr10 39609213 39609382 -100707383 + MIR SINE MIR 89 261 -1 217 286 154 0 chr10 39609522 39609613 -100707152 + L2 LINE L2 2208 2312 -1002 230 266 138 11 chr10 39609906 39610000 -100706765 - LTR47A LTR ERVL -86 366 261 2864 164 17 67 chr10 39610249 39610523 -100706242 - LTR49-int LTR ERV1 -633 5698 5412 2283 97 27 0 chr10 39610523 39610821 -100705944 + AluSp SINE Alu 1 306 -7 2864 164 17 67 chr10 39610821 39611341 -100705424 - LTR49-int LTR ERV1 -919 5412 4868 2203 127 10 0 chr10 39611341 39611648 -100705117 - AluSx SINE Alu -2 310 1 2864 164 17 67 chr10 39611648 39611774 -100704991 - LTR49-int LTR ERV1 -1463 4868 3971 34 0 0 0 chr10 39611774 39611808 -100704957 + AT_rich Low_complexity Low_complexity 1 34 0 1428 171 24 99 chr10 39611810 39611985 -100704780 - L1MA3 LINE L1 -13 6292 6106 2108 116 18 0 chr10 39611985 39612270 -100704495 + AluSx SINE Alu 1 290 -22 1428 171 24 99 chr10 39612270 39612510 -100704255 - L1MA3 LINE L1 -199 6106 5908 2334 83 0 10 chr10 39612542 39612844 -100703921 - AluSq SINE Alu -14 299 1 2339 94 3 3 chr10 39612844 39613152 -100703613 - AluSp SINE Alu -5 308 1 26 30 0 0 chr10 39614088 39614121 -100702644 + AT_rich Low_complexity Low_complexity 1 33 0 257 49 0 0 chr10 39614175 39614216 -100702549 - AluSc SINE Alu -1 299 259 1500 113 5 23 chr10 39614216 39614301 -100702464 - AluSc SINE Alu -92 217 132 2091 139 3 0 chr10 39614301 39614604 -100702161 - AluSx SINE Alu -8 304 1 1500 113 5 23 chr10 39614604 39614739 -100702026 - AluSc SINE Alu -177 132 1 22 56 0 0 chr10 39614740 39614776 -100701989 + AT_rich Low_complexity Low_complexity 1 36 0 2062 103 21 10 chr10 39615002 39615293 -100701472 + AluSc SINE Alu 1 294 -15 21 0 0 0 chr10 39615416 39615437 -100701328 + AT_rich Low_complexity Low_complexity 1 21 0 1930 105 58 10 chr10 39615792 39616087 -100700678 + AluSx SINE Alu 1 309 -3 1789 177 7 0 chr10 39616089 39616434 -100700331 + AluJb SINE Alu 1 312 0 2363 67 7 13 chr10 39616690 39616990 -100699775 + AluY SINE Alu 1 298 -13 559 69 0 0 chr10 39617463 39617535 -100699230 + AluY SINE Alu 129 200 -111 28 48 0 0 chr10 39617995 39618037 -100698728 + AT_rich Low_complexity Low_complexity 1 42 0 1986 140 0 7 chr10 39618037 39618322 -100698443 - AluSx SINE Alu -25 287 5 2360 65 0 23 chr10 39618621 39618928 -100697837 - AluY SINE Alu -11 300 1 1874 81 85 0 chr10 39619636 39619923 -100696842 + AluY SINE Alu 1 309 0 403 229 46 23 chr10 39619925 39620056 -100696709 - LTR33A LTR ERVL -23 500 367 2312 109 0 10 chr10 39620617 39620929 -100695836 + AluSc SINE Alu 1 309 0 369 355 130 5 chr10 39620991 39621191 -100695574 + MIR SINE MIR 1 225 -37 2105 103 7 42 chr10 39621427 39621737 -100695028 - AluSx SINE Alu -13 299 1 839 158 0 0 chr10 39621836 39621969 -100694796 + AluSg/x SINE Alu 174 306 -4 2387 67 0 10 chr10 39622296 39622595 -100694170 + AluY SINE Alu 1 296 -15 31 26 0 0 chr10 39622709 39622747 -100694018 + AT_rich Low_complexity Low_complexity 1 38 0 354 268 55 0 chr10 39623516 39623643 -100693122 - MER117 DNA MER1_type -34 163 30 219 277 69 54 chr10 39623750 39623880 -100692885 - L3 LINE CR1 -275 1302 1171 372 133 0 0 chr10 39624051 39624111 -100692654 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 190 314 20 39 chr10 39624965 39625067 -100691698 + L3 LINE CR1 1200 1299 -278 236 323 100 31 chr10 39625113 39625243 -100691522 + L3 LINE CR1 1420 1558 -19 307 318 156 65 chr10 39625891 39626199 -100690566 - L2 LINE L2 -2 3270 2935 515 342 58 19 chr10 39626235 39626548 -100690217 - L2 LINE L2 -468 2846 2522 256 311 8 25 chr10 39626760 39626879 -100689886 + GA-rich Low_complexity Low_complexity 2 118 0 2409 60 27 0 chr10 39627076 39627374 -100689391 + AluY SINE Alu 1 306 -5 288 312 39 39 chr10 39627752 39628159 -100688606 + L1MEc LINE L1 1010 1416 -4980 23 0 0 0 chr10 39628256 39628279 -100688486 + AT_rich Low_complexity Low_complexity 1 23 0 2230 95 0 19 chr10 39628375 39628692 -100688073 - AluY SINE Alu 0 311 1 684 252 64 58 chr10 39628815 39629347 -100687418 + L1MEd LINE L1 662 1196 -4923 2071 98 7 0 chr10 39629371 39629646 -100687119 + AluSx SINE Alu 1 277 -35 863 164 24 128 chr10 39630064 39630393 -100686372 + L1M4 LINE L1 4210 4504 -1642 211 269 11 32 chr10 39630406 39630499 -100686266 + A-rich Low_complexity Low_complexity 2 92 0 724 75 0 0 chr10 39630729 39630823 -100685942 + AluSc SINE Alu 41 134 -175 1861 164 3 3 chr10 39630823 39631133 -100685632 + AluSg SINE Alu 1 310 0 1259 183 0 31 chr10 39631157 39631386 -100685379 - AluJo SINE Alu -20 292 71 427 321 52 21 chr10 39631394 39631587 -100685178 + MIR SINE MIR 28 226 -36 927 182 13 13 chr10 39633170 39633329 -100683436 - FRAM SINE Alu -16 160 2 1596 181 43 0 chr10 39633350 39633626 -100683139 - AluJb SINE Alu -24 288 1 21 0 0 0 chr10 39633631 39633652 -100683113 + AT_rich Low_complexity Low_complexity 1 21 0 1923 107 71 7 chr10 39633728 39634008 -100682757 - AluSg SINE Alu -12 298 1 1887 157 3 13 chr10 39635218 39635531 -100681234 - AluJb SINE Alu -2 310 1 2352 100 0 3 chr10 39636051 39636362 -100680403 + AluSg SINE Alu 1 310 0 309 283 123 9 chr10 39638813 39638919 -100677846 + L2 LINE L2 3193 3310 -3 389 185 12 25 chr10 39639306 39639387 -100677378 - MER3 DNA MER1_type -129 80 1 2186 102 0 7 chr10 39639468 39639763 -100677002 + AluSq SINE Alu 1 293 -20 21 0 0 0 chr10 39639801 39639822 -100676943 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr10 39639878 39639918 -100676847 + AT_rich Low_complexity Low_complexity 1 40 0 2314 73 7 3 chr10 39640027 39640330 -100676435 - AluY SINE Alu -2 309 6 1042 83 8 0 chr10 39640335 39640467 -100676298 - AluY SINE Alu -178 133 1 2361 53 3 13 chr10 39640471 39640773 -100675992 - AluY SINE Alu 0 311 13 678 233 0 10 chr10 39640892 39641085 -100675680 + L1M4 LINE L1 4762 4952 -1194 1702 222 20 10 chr10 39641127 39641637 -100675128 + L1M4 LINE L1 2497 3011 -3135 1389 199 8 16 chr10 39641639 39641890 -100674875 + AluJo SINE Alu 40 288 -24 252 282 19 10 chr10 39641906 39642009 -100674756 + L1M4 LINE L1 3035 3138 -3008 2522 58 10 3 chr10 39642136 39642445 -100674320 - AluY SINE Alu 0 311 1 2296 75 0 10 chr10 39642457 39642752 -100674013 - AluY SINE Alu -19 292 1 1868 255 78 66 chr10 39642753 39643679 -100673086 + L1M4 LINE L1 3392 4336 -1810 2104 106 3 0 chr10 39643679 39644013 -100672752 + AluSx SINE Alu 1 335 0 1868 255 78 66 chr10 39644013 39644170 -100672595 + L1M4 LINE L1 4336 4490 -1656 2451 78 0 0 chr10 39644173 39644479 -100672286 + AluY SINE Alu 4 309 -2 308 301 65 0 chr10 39644486 39644579 -100672186 - L1M4 LINE L1 -1253 4893 4795 515 326 11 4 chr10 39644626 39644893 -100671872 - L1M4 LINE L1 -1359 4787 4519 475 164 35 0 chr10 39645046 39645162 -100671603 - L1M4 LINE L1 -2898 3248 3129 1431 212 14 7 chr10 39645348 39645636 -100671129 - AluJo SINE Alu -22 290 1 279 0 0 0 chr10 39645733 39645764 -100671001 + (CA)n Simple_repeat Simple_repeat 2 32 0 2281 76 0 3 chr10 39645780 39646068 -100670697 - AluY SINE Alu -24 287 1 2185 144 32 21 chr10 39646078 39646515 -100670250 - L1MA6 LINE L1 -3 6297 5856 556 164 8 16 chr10 39646518 39646640 -100670125 + L1MA6 LINE L1 5706 5826 -474 399 284 151 32 chr10 39647644 39647981 -100668784 - L1MCa LINE L1 -4448 1978 1203 2421 72 0 3 chr10 39648006 39648311 -100668454 - AluY SINE Alu -7 304 1 2025 134 0 3 chr10 39648370 39648678 -100668087 - AluSq SINE Alu 0 307 1 2089 98 7 26 chr10 39648698 39649004 -100667761 - AluSx SINE Alu -10 302 3 612 198 0 8 chr10 39649197 39649323 -100667442 - L1PB4 LINE L1 -5 6151 6027 606 90 0 0 chr10 39649323 39649412 -100667353 + AluSc SINE Alu 215 303 -6 556 106 0 32 chr10 39649413 39649507 -100667258 - L1PB4 LINE L1 -291 5865 5775 261 226 40 16 chr10 39649507 39649631 -100667134 + (TA)n Simple_repeat Simple_repeat 2 128 0 2398 158 13 4 chr10 39649633 39650101 -100666664 - L1PB4 LINE L1 -371 5785 5314 2237 233 84 9 chr10 39650097 39650779 -100665986 + L1PB4 LINE L1 4571 5303 -843 * 520 241 38 19 chr10 39651978 39652136 -100664629 - MER45A DNA AcHobo -17 161 1 23 0 0 0 chr10 39652368 39652391 -100664374 + AT_rich Low_complexity Low_complexity 1 23 0 3355 139 191 11 chr10 39653205 39653905 -100662860 - LTR1B LTR ERV1 0 826 1 2244 86 3 23 chr10 39654733 39655037 -100661728 - AluY SINE Alu -13 298 1 2259 118 0 0 chr10 39655159 39655456 -100661309 - AluSg SINE Alu -13 297 1 22 80 0 0 chr10 39655653 39655703 -100661062 + AT_rich Low_complexity Low_complexity 1 50 0 2352 84 3 0 chr10 39656450 39656747 -100660018 - AluY SINE Alu -13 298 1 1992 124 11 0 chr10 39656756 39657039 -100659726 - AluSx SINE Alu -26 286 1 745 257 6 6 chr10 39657039 39657222 -100659543 + MER58A DNA MER1_type 42 224 0 430 228 18 23 chr10 39657334 39657454 -100659311 + MLT1J2 LTR MaLR 37 151 -258 2586 48 0 10 chr10 39658893 39659207 -100657558 - AluY SINE Alu 0 311 1 232 174 22 0 chr10 39659825 39659871 -100656894 + (CA)n Simple_repeat Simple_repeat 1 47 0 2244 111 3 0 chr10 39661468 39661765 -100655000 + AluSp SINE Alu 1 298 -15 2406 100 7 0 chr10 39661981 39662282 -100654483 - AluSq SINE Alu -10 303 1 1864 260 69 55 chr10 39662282 39662421 -100654344 - L1MCb LINE L1 -3045 3519 3383 1986 171 0 0 chr10 39662421 39662726 -100654039 - AluSx SINE Alu -7 305 1 1864 260 69 55 chr10 39662726 39663209 -100653556 - L1MCb LINE L1 -3181 3383 2908 2222 119 0 0 chr10 39663209 39663503 -100653262 - AluSg SINE Alu -16 294 1 1864 260 69 55 chr10 39663503 39663972 -100652793 - L1MCb LINE L1 -3656 2908 2447 1618 188 32 0 chr10 39663972 39664254 -100652511 + AluSx SINE Alu 1 291 -21 1864 260 69 55 chr10 39664254 39665336 -100651429 - L1MCb LINE L1 -4117 2447 1382 2208 127 0 0 chr10 39665336 39665627 -100651138 - AluSx SINE Alu -21 291 1 1864 260 69 55 chr10 39665627 39666017 -100650748 - L1MCb LINE L1 -5182 1382 999 2261 95 0 3 chr10 39666017 39666311 -100650454 + AluY SINE Alu 1 293 -18 1864 260 69 55 chr10 39666311 39666533 -100650232 - L1MCb LINE L1 -5565 999 551 2250 104 0 3 chr10 39666617 39666916 -100649849 - AluSc SINE Alu -11 298 1 3085 226 42 59 chr10 39666930 39667599 -100649166 - L1MD1 LINE L1 -14 6622 5943 2081 122 3 0 chr10 39667599 39667914 -100648851 + AluSq SINE Alu 1 316 0 3085 226 42 59 chr10 39667914 39668137 -100648628 - L1MD1 LINE L1 -693 5943 5718 2088 146 0 0 chr10 39668137 39668438 -100648327 - AluSx SINE Alu -11 301 1 3085 226 42 59 chr10 39668438 39669102 -100647663 - L1MD1 LINE L1 -918 5718 5080 1700 193 56 134 chr10 39669100 39669696 -100647069 - L1MD1 LINE L1 -3190 3350 2709 * 2145 112 0 0 chr10 39669696 39669982 -100646783 + AluSc SINE Alu 1 286 -23 1700 193 56 134 chr10 39669982 39670354 -100646411 - L1MD1 LINE L1 -3831 2709 2490 2602 42 7 0 chr10 39670354 39670661 -100646104 - AluY SINE Alu -2 309 1 1700 193 56 134 chr10 39670661 39671012 -100645753 - L1MD1 LINE L1 -4050 2490 2113 2110 228 63 56 chr10 39671018 39671084 -100645681 - MER76 LTR ERV 0 688 624 3742 180 54 36 chr10 39671084 39671895 -100644870 - LTR1B LTR ERV1 0 826 1 2110 228 63 56 chr10 39671895 39672368 -100644397 - MER76 LTR ERV -64 624 139 2062 113 7 0 chr10 39672368 39672671 -100644094 + AluY SINE Alu 1 305 0 2110 228 63 56 chr10 39672671 39672809 -100643956 - MER76 LTR ERV -549 139 4 4502 229 62 56 chr10 39672817 39673233 -100643532 - L1MD1 LINE L1 -4448 2092 1680 2277 107 0 0 chr10 39673233 39673532 -100643233 - AluSq SINE Alu -14 299 1 4502 229 62 56 chr10 39673532 39675031 -100641734 - L1MD1 LINE L1 -4860 1680 18 1576 276 35 15 chr10 39675051 39675570 -100641195 - L1MCb LINE L1 -5471 574 46 979 42 17 0 chr10 39675815 39675935 -100640830 - L1PA8 LINE L1 -2 6170 6049 553 296 82 40 chr10 39675968 39676373 -100640392 - L1M4 LINE L1 -449 5729 5308 244 246 14 14 chr10 39677164 39677233 -100639532 + CT-rich Low_complexity Low_complexity 2 70 0 583 107 83 0 chr10 39677918 39678161 -100638604 + (TA)n Simple_repeat Simple_repeat 1 263 0 27 29 0 0 chr10 39678181 39678215 -100638550 + AT_rich Low_complexity Low_complexity 1 34 0 2239 103 7 3 chr10 39678215 39678525 -100638240 + AluSq SINE Alu 1 311 -2 368 179 34 0 chr10 39678569 39678686 -100638079 + (TA)n Simple_repeat Simple_repeat 1 121 0 2218 104 3 0 chr10 39679349 39679658 -100637107 - AluSg SINE Alu 0 310 1 225 298 0 32 chr10 39679658 39679698 -100637067 - MARNA DNA Mariner -88 498 458 2189 189 35 16 chr10 39679698 39680122 -100636643 - Tigger2a DNA MER2_type 0 434 3 225 298 0 32 chr10 39680122 39680169 -100636596 - MARNA DNA Mariner -128 458 414 274 209 143 11 chr10 39683082 39683173 -100633592 - MIR SINE MIR -114 148 46 766 203 19 61 chr10 39683586 39683798 -100632967 - L1MA8 LINE L1 -3 6288 6086 1265 288 126 17 chr10 39683942 39684692 -100632073 + L2 LINE L2 2251 3084 -229 2322 92 0 0 chr10 39684810 39685102 -100631663 - AluSg SINE Alu -17 293 2 366 213 25 12 chr10 39685112 39685192 -100631573 - Tigger5 DNA MER2_type -6 2317 2237 249 200 0 83 chr10 39685202 39685262 -100631503 - Tigger5 DNA MER2_type -2268 55 1 317 237 21 11 chr10 39685264 39685357 -100631408 + (TA)n Simple_repeat Simple_repeat 1 94 0 352 273 47 39 chr10 39685385 39685513 -100631252 + L2 LINE L2 3185 3313 0 2118 120 30 0 chr10 39685774 39686075 -100630690 - AluSx SINE Alu 0 312 3 22 0 0 0 chr10 39686207 39686229 -100630536 + AT_rich Low_complexity Low_complexity 1 22 0 263 330 54 9 chr10 39686367 39686479 -100630286 - MIR SINE MIR -71 137 21 243 61 0 0 chr10 39686977 39687010 -100629755 + (CA)n Simple_repeat Simple_repeat 1 33 0 300 333 123 9 chr10 39688645 39688759 -100628006 + MIR3 SINE MIR 34 160 -48 1702 121 4 0 chr10 39689071 39689302 -100627463 - AluSq SINE Alu -60 253 22 802 82 0 0 chr10 39689477 39689575 -100627190 - AluY SINE Alu -15 296 199 510 113 0 12 chr10 39689683 39689763 -100627002 - MADE1 DNA Mariner 0 80 2 885 160 7 0 chr10 39690401 39690551 -100626214 - AluSp/q SINE Alu -4 309 159 281 125 0 0 chr10 39690551 39690591 -100626174 - AluS SINE Alu -239 61 22 203 288 68 0 chr10 39690775 39690834 -100625931 + L3 LINE CR1 1513 1575 -2 209 327 167 6 chr10 39690912 39691074 -100625691 + MIR SINE MIR 5 192 -70 677 172 74 25 chr10 39691142 39691264 -100625501 - FLAM_C SINE Alu -11 132 5 27 81 0 0 chr10 39691296 39691358 -100625407 + AT_rich Low_complexity Low_complexity 1 62 0 2360 87 0 10 chr10 39691454 39691753 -100625012 + AluY SINE Alu 1 296 -15 1954 131 0 20 chr10 39692354 39692660 -100624105 - AluSx SINE Alu -12 300 1 191 290 58 0 chr10 39693985 39694054 -100622711 + L3 LINE CR1 1505 1577 0 186 348 11 43 chr10 39694181 39694273 -100622492 - MIR SINE MIR -131 131 43 824 287 84 69 chr10 39694719 39694982 -100621783 + L2 LINE L2 2475 2733 -580 2122 120 0 7 chr10 39694982 39695281 -100621484 + AluSc SINE Alu 1 297 -12 824 287 84 69 chr10 39695281 39695794 -100620971 + L2 LINE L2 2733 3313 0 2161 126 3 3 chr10 39696196 39696498 -100620267 + AluSg SINE Alu 1 302 -8 1561 151 28 21 chr10 39696614 39696905 -100619860 - L1 LINE L1 -1993 4153 3861 2881 236 24 8 chr10 39696911 39697702 -100619063 - L1 LINE L1 -2877 3269 2466 1462 178 32 124 chr10 39697702 39698112 -100618653 + MLT1B-int LTR MaLR 1364 1735 0 1471 172 42 135 chr10 39698112 39698542 -100618223 + MLT1B LTR MaLR 1 390 0 191 163 0 82 chr10 39698634 39698683 -100618082 + MIR3 SINE MIR 157 201 -7 6412 136 38 20 chr10 39698919 39699386 -100617379 - L1PB1 LINE L1 -3 6148 5691 2287 89 0 3 chr10 39699386 39699678 -100617087 - AluSc SINE Alu -18 291 1 6412 136 38 20 chr10 39699678 39699694 -100617071 - L1PB1 LINE L1 -460 5691 5677 2211 114 3 3 chr10 39699694 39700001 -100616764 - AluSx SINE Alu -5 307 1 6412 136 38 20 chr10 39700001 39701212 -100615553 - L1PB1 LINE L1 -474 5677 4413 770 243 114 64 chr10 39701289 39701647 -100615118 + MLT1J1 LTR MaLR 71 446 0 1355 247 26 106 chr10 39702388 39702964 -100613801 - L1M4 LINE L1 -2173 3973 3353 2128 71 0 51 chr10 39702964 39703283 -100613482 - AluY SINE Alu 0 305 2 1355 247 26 106 chr10 39703283 39703337 -100613428 - L1M4 LINE L1 -2793 3353 3296 2175 115 6 13 chr10 39703337 39703650 -100613115 - AluSx SINE Alu -1 311 1 1355 247 26 106 chr10 39703650 39704006 -100612759 - L1M4 LINE L1 -2850 3296 3067 1982 135 17 3 chr10 39704058 39704354 -100612411 + AluSg SINE Alu 1 300 -10 2155 139 0 0 chr10 39704363 39704673 -100612092 + AluSx SINE Alu 1 310 -2 2206 221 104 166 chr10 39704783 39704841 -100611924 - L1M4 LINE L1 -1612 4534 4474 2449 78 0 0 chr10 39704841 39705148 -100611617 - AluY SINE Alu -1 310 4 2206 221 104 166 chr10 39705148 39705308 -100611457 - L1M4 LINE L1 -1672 4474 4306 2114 106 3 0 chr10 39705308 39705642 -100611123 - AluSx SINE Alu 0 335 1 2206 221 104 166 chr10 39705642 39706569 -100610196 - L1M4 LINE L1 -1840 4306 3323 2315 75 0 10 chr10 39706569 39706864 -100609901 + AluY SINE Alu 1 292 -19 2206 221 104 166 chr10 39706864 39706876 -100609889 - L1M4 LINE L1 -2823 3323 3312 2535 58 10 3 chr10 39706876 39707185 -100609580 + AluY SINE Alu 1 311 0 2206 221 104 166 chr10 39707185 39707431 -100609334 - L1M4 LINE L1 -2834 3312 3052 1374 195 8 16 chr10 39707431 39707682 -100609083 - AluJo SINE Alu -24 288 40 2206 221 104 166 chr10 39707682 39708194 -100608571 - L1M4 LINE L1 -3094 3052 2497 753 233 0 10 chr10 39708236 39708394 -100608371 - L1M4 LINE L1 -1194 4952 4795 2723 189 58 18 chr10 39708394 39709179 -100607586 - L1MA8 LINE L1 -394 5789 4762 180 0 0 0 chr10 39709536 39709556 -100607209 + (TA)n Simple_repeat Simple_repeat 2 21 0 312 235 59 29 chr10 39709800 39709902 -100606863 + L2 LINE L2 3209 3313 0 2245 107 0 7 chr10 39710022 39710321 -100606444 + AluSg SINE Alu 1 297 -13 261 211 0 0 chr10 39710350 39710407 -100606358 + (CATA)n Simple_repeat Simple_repeat 4 60 0 1904 173 45 8 chr10 39710418 39710800 -100605965 + L1MB3 LINE L1 5785 6180 -3 2355 107 3 0 chr10 39710809 39711118 -100605647 + AluSg SINE Alu 1 310 0 405 0 0 0 chr10 39711125 39711170 -100605595 + (TA)n Simple_repeat Simple_repeat 2 46 0 333 337 31 27 chr10 39711270 39711564 -100605201 - MARNA DNA Mariner -48 538 244 243 0 0 0 chr10 39711710 39711737 -100605028 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1851 107 4 25 chr10 39711741 39712022 -100604743 - AluSc SINE Alu -34 275 1 29 60 0 0 chr10 39712109 39712159 -100604606 + AT_rich Low_complexity Low_complexity 1 50 0 43570 49 6 1 chr10 39713637 39719760 -100597005 + L1PA2 LINE L1 1 6155 0 180 0 0 0 chr10 39719769 39719789 -100596976 + (A)n Simple_repeat Simple_repeat 1 20 0 13441 92 4 0 chr10 39719789 39721613 -100595152 - L1P LINE L1 -4304 1842 11 2225 89 0 0 chr10 39721620 39721901 -100594864 - AluY SINE Alu -19 292 12 476 349 64 18 chr10 39722655 39722873 -100593892 + MIR SINE MIR 31 258 -4 194 83 56 0 chr10 39723120 39723156 -100593609 + (CAGAGA)n Simple_repeat Simple_repeat 4 41 0 180 200 0 0 chr10 39724143 39724183 -100592582 + CT-rich Low_complexity Low_complexity 2 41 0 1758 164 33 41 chr10 39724311 39724677 -100592088 + MLT1A1 LTR MaLR 1 363 -2 442 311 47 16 chr10 39724722 39724912 -100591853 - MIR SINE MIR -46 216 21 232 236 56 14 chr10 39725304 39725376 -100591389 - MIR SINE MIR -69 193 119 213 206 33 98 chr10 39725379 39725471 -100591294 - L3 LINE CR1 -166 1411 1326 218 344 54 11 chr10 39725657 39725750 -100591015 - L2 LINE L2 -4 3268 3172 220 93 256 0 chr10 39725869 39725912 -100590853 - MIR3 SINE MIR -33 175 122 591 239 29 58 chr10 39726254 39726459 -100590306 + MER20 DNA MER1_type 1 199 -20 243 220 68 0 chr10 39726658 39726717 -100590048 + L2 LINE L2 3209 3271 -1 2235 91 3 0 chr10 39726825 39727112 -100589653 - AluSq SINE Alu -12 301 14 1171 27 0 14 chr10 39727112 39727260 -100589505 + L1PA4 LINE L1 6009 6154 -1 24 77 0 0 chr10 39727767 39727819 -100588946 + AT_rich Low_complexity Low_complexity 1 52 0 251 154 15 0 chr10 39728031 39728096 -100588669 + (TA)n Simple_repeat Simple_repeat 1 66 0 183 129 0 0 chr10 39728886 39728917 -100587848 + (TA)n Simple_repeat Simple_repeat 1 31 0 297 51 0 0 chr10 39728981 39729020 -100587745 + (TCTA)n Simple_repeat Simple_repeat 3 41 0 332 289 15 0 chr10 39729021 39729156 -100587609 + (TA)n Simple_repeat Simple_repeat 2 138 0 1851 111 0 11 chr10 39729763 39730024 -100586741 + AluSx SINE Alu 41 298 -14 206 213 27 13 chr10 39730629 39730704 -100586061 + (TAAA)n Simple_repeat Simple_repeat 3 78 0 346 287 16 0 chr10 39730774 39730956 -100585809 + (TA)n Simple_repeat Simple_repeat 1 184 0 217 241 12 24 chr10 39730926 39731009 -100585756 + (CA)n Simple_repeat Simple_repeat 2 83 0 * 519 117 0 0 chr10 39731397 39731474 -100585291 - AluS SINE Alu -236 77 1 406 104 45 0 chr10 39731496 39731563 -100585202 - MER41B LTR ERV1 -87 548 479 1963 127 29 23 chr10 39731714 39732022 -100584743 + AluY SINE Alu 1 310 -1 21 36 0 0 chr10 39732219 39732247 -100584518 + AT_rich Low_complexity Low_complexity 1 28 0 564 268 109 5 chr10 39732714 39732934 -100583831 + L1ME3A LINE L1 5364 5606 -556 682 271 21 50 chr10 39733042 39733382 -100583383 + L1ME3A LINE L1 5611 5940 -230 295 338 52 42 chr10 39734718 39734931 -100581834 + MIR SINE MIR 20 234 -28 219 204 0 0 chr10 39735470 39735514 -100581251 - L2 LINE L2 -7 3306 3263 313 369 72 22 chr10 39735624 39735846 -100580919 + MIR SINE MIR 4 236 -26 623 325 26 18 chr10 39737297 39737525 -100579240 - MIR SINE MIR -30 232 3 189 214 0 54 chr10 39737734 39737790 -100578975 + MIR SINE MIR 203 255 -7 44 35 0 0 chr10 39738996 39739054 -100577711 + AT_rich Low_complexity Low_complexity 1 58 0 335 313 15 80 chr10 39739061 39739262 -100577503 - HAL1 LINE L1 -96 2411 2224 386 287 174 6 chr10 39740795 39740962 -100575803 - MIR SINE MIR -34 228 34 318 326 56 0 chr10 39741144 39741233 -100575532 - L2 LINE L2 -36 3236 3143 627 267 87 20 chr10 39741269 39741464 -100575301 - MLT1J2 LTR MaLR 0 450 243 492 222 28 9 chr10 39741475 39741583 -100575182 - MLT1J2 LTR MaLR -340 110 1 3928 190 57 8 chr10 39741788 39742539 -100574226 - MER21B LTR ERV1 -75 788 1 188 333 126 0 chr10 39742539 39742674 -100574091 - L2 LINE L2 -61 3252 3101 24 0 0 0 chr10 39742879 39742903 -100573862 + AT_rich Low_complexity Low_complexity 1 24 0 201 286 209 0 chr10 39743155 39743260 -100573505 - L2 LINE L2 -842 2472 2346 23 0 0 0 chr10 39743364 39743387 -100573378 + AT_rich Low_complexity Low_complexity 1 23 0 221 326 111 7 chr10 39743502 39743637 -100573128 - MIR SINE MIR -70 192 44 32 86 0 0 chr10 39743896 39743977 -100572788 + AT_rich Low_complexity Low_complexity 1 81 0 194 319 77 44 chr10 39744313 39744404 -100572361 - L2 LINE L2 0 3272 3179 448 248 18 9 chr10 39744492 39744601 -100572164 - L2 LINE L2 -5 3308 3199 2011 107 68 0 chr10 39744602 39744883 -100571882 - AluSc SINE Alu -9 300 1 216 0 0 0 chr10 39744893 39744917 -100571848 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 911 74 8 0 chr10 39744921 39745043 -100571722 - L1P3 LINE L1 -574 5598 5476 4415 37 4 4 chr10 39745043 39745578 -100571187 + L1PA8 LINE L1 5635 6171 -1 252 340 215 0 chr10 39745670 39745814 -100570951 - L2 LINE L2 -296 3017 2843 279 304 22 0 chr10 39745949 39746041 -100570724 + (TATATG)n Simple_repeat Simple_repeat 1 94 0 233 276 17 0 chr10 39746043 39746101 -100570664 + GA-rich Low_complexity Low_complexity 3 61 0 308 230 53 53 chr10 39746103 39746216 -100570549 + L1MD3 LINE L1 7656 7980 -15 417 282 123 21 chr10 39746264 39746463 -100570302 + MIR SINE MIR 36 261 -1 303 364 33 0 chr10 39746618 39746739 -100570026 - L2 LINE L2 -11 3261 3137 280 318 15 145 chr10 39747170 39747570 -100569195 - L3 LINE CR1 -229 1348 1001 24 32 0 0 chr10 39747663 39747694 -100569071 + AT_rich Low_complexity Low_complexity 1 31 0 1597 196 141 0 chr10 39748087 39748434 -100568331 + MSTD LTR MaLR 1 396 0 388 339 85 22 chr10 39748723 39748947 -100567818 - MIR SINE MIR 0 262 25 482 327 84 63 chr10 39748969 39749351 -100567414 - L2 LINE L2 -7 3306 2917 2147 221 75 0 chr10 39750118 39750588 -100566177 - MLT1D LTR MaLR 0 505 1 411 318 39 31 chr10 39750846 39751104 -100565661 - MIR SINE MIR 0 262 3 707 256 163 0 chr10 39752543 39752746 -100564019 - MIR SINE MIR -25 237 2 2129 135 3 0 chr10 39753462 39753765 -100563000 + AluSx SINE Alu 1 304 -8 2757 222 50 12 chr10 39753896 39754751 -100562014 + L1MB7 LINE L1 5281 6168 -16 1442 175 73 110 chr10 39755377 39755840 -100560925 + MLT1D LTR MaLR 1 446 -59 6613 152 18 14 chr10 39755867 39758079 -100558686 + L1MA4 LINE L1 4082 6300 0 351 65 0 0 chr10 39759138 39759184 -100557581 + (CAAT)n Simple_repeat Simple_repeat 2 47 0 354 326 74 0 chr10 39760407 39760542 -100556223 - MIR SINE MIR -47 215 71 247 264 88 0 chr10 39760593 39760684 -100556081 - MIR SINE MIR -70 192 94 1467 131 146 11 chr10 39761275 39761542 -100555223 + AluSq SINE Alu 1 303 0 1406 248 35 5 chr10 39762641 39762781 -100553984 + MLT1C LTR MaLR 53 187 -280 501 17 0 0 chr10 39762781 39762839 -100553926 + (CA)n Simple_repeat Simple_repeat 2 59 0 1406 248 35 5 chr10 39762839 39763093 -100553672 + MLT1C LTR MaLR 187 459 -8 297 311 54 81 chr10 39763244 39763466 -100553299 - MIR SINE MIR -11 251 36 194 350 144 21 chr10 39764850 39765238 -100551527 + L2 LINE L2 2451 2886 -428 2439 81 0 0 chr10 39765357 39765654 -100551111 + AluSg1 SINE Alu 1 297 -12 1975 145 14 0 chr10 39765862 39766152 -100550613 - MER1B DNA MER1_type 0 339 46 1357 214 83 36 chr10 39766472 39766808 -100549957 + MLT1A2 LTR MaLR 23 374 0 191 368 35 21 chr10 39767624 39767768 -100548997 - L2 LINE L2 0 3313 3168 239 341 0 12 chr10 39767963 39768045 -100548720 + MIR3 SINE MIR 15 95 -113 396 268 30 61 chr10 39768228 39768392 -100548373 - MER5B DNA MER1_type -1 177 19 216 376 112 35 chr10 39768539 39768597 -100548168 + L2 LINE L2 2906 2958 -314 2004 155 0 3 chr10 39768597 39768906 -100547859 - AluSc SINE Alu -1 308 1 216 376 112 35 chr10 39768906 39769187 -100547578 + L2 LINE L2 2958 3271 -1 3900 129 91 66 chr10 39769910 39770978 -100545787 - pTR5 LTR ERV1 0 2438 59 1074 172 116 14 chr10 39821003 39821218 -100495547 + AluJo SINE Alu 53 289 -23 223 356 56 11 chr10 39821431 39821521 -100495244 + L2 LINE L2 3143 3236 -36 1980 182 64 18 chr10 39822432 39822982 -100493783 + L1M1 LINE L1 2138 2712 -4853 288 35 0 103 chr10 39822982 39823040 -100493725 + AluSq/x SINE Alu 87 138 -164 1804 127 36 23 chr10 39823044 39823351 -100493414 + AluSx SINE Alu 1 311 -1 277 307 60 23 chr10 39823910 39824128 -100492637 + L1ME LINE L1 5547 5772 -349 1806 128 3 113 chr10 39824163 39824507 -100492258 + AluSp SINE Alu 1 306 -7 1837 146 32 4 chr10 39824732 39825013 -100491752 - AluSq SINE Alu -24 289 1 292 253 0 0 chr10 39825063 39825138 -100491627 + MER46C DNA MER2_type 219 293 -45 2310 111 0 0 chr10 39825275 39825572 -100491193 + AluSc SINE Alu 3 299 -10 1157 145 0 0 chr10 39825743 39825909 -100490856 - AluSg/x SINE Alu -18 294 129 1657 179 14 10 chr10 39825951 39826248 -100490517 - AluJo SINE Alu -12 300 3 2069 138 0 0 chr10 39826450 39826747 -100490018 - AluSx SINE Alu -15 297 1 25 65 0 0 chr10 39826831 39826877 -100489888 + AT_rich Low_complexity Low_complexity 1 46 0 264 30 0 0 chr10 39827996 39828029 -100488736 + (CA)n Simple_repeat Simple_repeat 2 34 0 34 24 0 0 chr10 39828029 39828070 -100488695 + AT_rich Low_complexity Low_complexity 1 41 0 23 0 0 0 chr10 39828138 39828161 -100488604 + AT_rich Low_complexity Low_complexity 1 23 0 1971 181 59 17 chr10 39828284 39828693 -100488072 + MSTB LTR MaLR 1 426 0 2091 98 7 7 chr10 39829474 39829770 -100486995 + AluY SINE Alu 1 296 -15 32 0 0 0 chr10 39830703 39830735 -100486030 + AT_rich Low_complexity Low_complexity 1 32 0 2089 120 0 3 chr10 39830797 39831124 -100485641 + AluY SINE Alu 1 311 0 330 331 78 24 chr10 39831138 39831304 -100485461 + MIR SINE MIR 62 236 -26 1067 195 87 30 chr10 39831950 39832195 -100484570 + L1MEc LINE L1 2000 2274 -4122 1924 122 45 3 chr10 39832195 39832483 -100484282 + AluSg SINE Alu 1 300 -10 1067 195 87 30 chr10 39832483 39832606 -100484159 + L1MEc LINE L1 2274 2389 -4007 416 311 173 38 chr10 39832618 39833271 -100483494 - L2 LINE L2 -354 2960 2220 205 331 41 16 chr10 39833920 39834041 -100482724 - MIR SINE MIR -32 230 107 200 289 0 24 chr10 39834544 39834627 -100482138 + MIR SINE MIR 155 235 -27 381 43 0 0 chr10 39834731 39834778 -100481987 + (TG)n Simple_repeat Simple_repeat 2 48 0 211 350 41 0 chr10 39835263 39835360 -100481405 - L2 LINE L2 -528 2786 2686 736 315 99 41 chr10 39835370 39835884 -100480881 + L2 LINE L2 2432 2975 -339 190 242 15 61 chr10 39836146 39836212 -100480553 - L2 LINE L2 -84 3229 3167 345 366 84 0 chr10 39836853 39837055 -100479710 - MIR SINE MIR -42 220 2 22 35 0 0 chr10 39837057 39837086 -100479679 + AT_rich Low_complexity Low_complexity 1 29 0 1508 193 28 43 chr10 39837937 39838331 -100478434 - MER89 LTR ERV1 0 559 172 206 309 128 0 chr10 39838426 39838520 -100478245 - L2 LINE L2 -262 3010 2905 925 226 26 52 chr10 39839200 39839389 -100477376 + MER58A DNA MER1_type 1 184 -2236 2244 114 0 0 chr10 39839389 39839697 -100477068 - AluSg SINE Alu -2 308 1 925 226 26 52 chr10 39839697 39839737 -100477028 + MER58A DNA MER1_type 184 224 0 213 207 52 0 chr10 39839838 39839896 -100476869 - MIR SINE MIR -102 160 100 213 391 51 7 chr10 39840187 39840325 -100476440 + MIR SINE MIR 44 187 -75 788 297 60 87 chr10 39840333 39840942 -100475823 - L2 LINE L2 -5 3308 2715 193 338 26 0 chr10 39841316 39841393 -100475372 + L2 LINE L2 2708 2786 -528 357 109 0 0 chr10 39841879 39841934 -100474831 + (CA)n Simple_repeat Simple_repeat 2 56 0 200 289 0 24 chr10 39842044 39842127 -100474638 - MIR SINE MIR -27 235 155 205 331 41 16 chr10 39842629 39842750 -100474015 + MIR SINE MIR 107 230 -32 470 314 159 45 chr10 39843399 39844178 -100472587 + L2 LINE L2 2220 3081 -191 2225 287 258 14 chr10 39844366 39845697 -100471068 + L2 LINE L2 1375 3032 -281 2263 149 37 1 chr10 39845697 39846424 -100470341 - L1PB1 LINE L1 -554 5597 4852 3774 102 0 11 chr10 39846431 39846973 -100469792 + L1PB1 LINE L1 5615 6150 -1 2658 94 3 0 chr10 39847248 39847598 -100469167 + THE1A LTR MaLR 5 355 0 698 229 252 14 chr10 39847801 39848225 -100468540 + L1M4 LINE L1 4411 4935 -1211 335 250 62 7 chr10 39848303 39848447 -100468318 + L1MA10 LINE L1 6181 6332 -2 549 305 51 58 chr10 39848466 39848758 -100468007 + L2 LINE L2 3022 3311 -2 315 300 168 11 chr10 39849003 39849193 -100467572 - L1ME4a LINE L1 -8 6113 5894 274 268 70 0 chr10 39850566 39850637 -100466128 - L2 LINE L2 0 3313 3238 551 292 74 10 chr10 39850809 39851011 -100465754 + MIR SINE MIR 32 246 -16 4168 179 22 39 chr10 39851255 39852041 -100464724 - L1MB3 LINE L1 -7 6176 5378 2597 97 6 0 chr10 39852041 39852392 -100464373 - THE1A LTR MaLR -2 353 1 11473 102 6 8 chr10 39852393 39853974 -100462791 - THE1A-int LTR MaLR -1 1579 1 2606 74 14 0 chr10 39853974 39854324 -100462441 - THE1A LTR MaLR 0 355 1 4168 179 22 39 chr10 39854324 39854452 -100462313 - L1MB3 LINE L1 -803 5380 5275 191 314 113 32 chr10 39855186 39855310 -100461455 + MIR SINE MIR 70 203 -59 3102 234 90 78 chr10 39855728 39856308 -100460457 + L1M4 LINE L1 3067 3638 -2508 2187 117 0 0 chr10 39856308 39856598 -100460167 + AluSg SINE Alu 10 299 -11 7123 48 3 5 chr10 39856598 39858179 -100458586 + L1PA6 LINE L1 4570 6149 -5 3102 234 90 78 chr10 39858179 39859413 -100457352 + L1M4 LINE L1 3637 4904 -1242 7818 18 0 3 chr10 39859427 39861121 -100455644 - L1PA2 LINE L1 0 6155 4465 6051 32 0 0 chr10 39861121 39861869 -100454896 + L1PA2 LINE L1 3700 4447 -1699 2157 68 61 7 chr10 39861869 39862164 -100454601 - AluY SINE Alu 0 311 1 948 222 42 14 chr10 39862203 39862487 -100454278 + L1MD1 LINE L1 5945 6236 -6 2248 105 0 0 chr10 39862577 39862871 -100453894 - AluSc SINE Alu -15 294 1 265 382 83 0 chr10 39862919 39863063 -100453702 - MIR SINE MIR 0 262 107 1954 119 3 60 chr10 39863063 39863382 -100453383 + AluSx SINE Alu 1 301 -11 233 330 71 9 chr10 39863422 39863534 -100453231 - MIR SINE MIR -142 120 2 180 0 0 0 chr10 39863641 39863661 -100453104 + (A)n Simple_repeat Simple_repeat 1 20 0 215 287 69 23 chr10 39865848 39865935 -100450830 - MIR SINE MIR -13 249 159 674 292 51 97 chr10 39866007 39866758 -100450007 + L2 LINE L2 2559 3288 -25 359 245 90 75 chr10 39867152 39867352 -100449413 + LTR33 LTR ERVL 61 263 -258 264 77 0 0 chr10 39867438 39867477 -100449288 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 1964 194 45 56 chr10 39868318 39868783 -100447982 - MLT2B3 LTR ERVL -20 534 75 307 225 0 0 chr10 39868881 39868952 -100447813 - MLT2B3 LTR ERVL -483 71 1 412 307 28 40 chr10 39869246 39869422 -100447343 - MIR SINE MIR -10 252 79 819 71 100 7 chr10 39869422 39869562 -100447203 - pTR5 LTR ERV1 -2237 201 49 318 250 0 0 chr10 39869562 39869646 -100447119 - LTR30 LTR ERV1 -98 624 541 2968 149 102 22 chr10 39869646 39870424 -100446341 - pTR5 LTR ERV1 -440 1682 119 518 112 0 0 chr10 39870428 39870517 -100446248 - pTR5 LTR ERV1 -1606 832 744 427 303 141 21 chr10 39870517 39870751 -100446014 - MIR SINE MIR 0 262 1 432 322 33 17 chr10 39870961 39871150 -100445615 + MIR SINE MIR 37 235 -27 236 340 50 0 chr10 39872152 39872252 -100444513 + MIR SINE MIR 118 222 -40 201 317 146 0 chr10 39872419 39872501 -100444264 - MIR SINE MIR -6 256 163 570 321 39 25 chr10 39873502 39873910 -100442855 + L1ME3A LINE L1 5483 5896 -274 482 201 0 15 chr10 39874003 39874137 -100442628 + L1PB4 LINE L1 3355 3486 -2660 * 4344 186 21 19 chr10 39874129 39875558 -100441207 + L1PB4 LINE L1 4729 6154 -2 405 164 0 0 chr10 39875818 39875891 -100440874 + (TA)n Simple_repeat Simple_repeat 2 74 0 1921 94 12 8 chr10 39875891 39876145 -100440620 - AluSg SINE Alu -55 255 1 201 300 86 0 chr10 39876934 39877004 -100439761 - L2 LINE L2 -25 3288 3213 2270 44 40 0 chr10 39877561 39878013 -100438752 + AluY SINE Alu 1 463 0 540 332 27 18 chr10 39878104 39878327 -100438438 - MIR SINE MIR -1 261 37 7744 16 0 0 chr10 39878936 39880346 -100436419 - L1PA2 LINE L1 -3 6152 4740 198 300 62 0 chr10 39881648 39881728 -100435037 + MIR SINE MIR 81 165 -97 1105 268 14 83 chr10 39882010 39882446 -100434319 + MLT1H LTR MaLR 11 416 -133 2292 103 0 0 chr10 39882744 39883035 -100433730 - AluSg SINE Alu -19 291 1 187 355 73 0 chr10 39883073 39883183 -100433582 - L2 LINE L2 -585 2729 2612 1969 109 0 8 chr10 39884008 39884264 -100432501 + AluSg SINE Alu 43 296 -14 265 314 38 9 chr10 39884278 39884383 -100432382 - MIR SINE MIR -148 114 7 273 336 26 9 chr10 39884557 39884673 -100432092 + MIR SINE MIR 1 118 -144 219 333 0 33 chr10 39884778 39884868 -100431897 + L2 LINE L2 3224 3310 -3 526 289 117 8 chr10 39885083 39885322 -100431443 - MER46C DNA MER2_type -66 272 8 391 316 153 58 chr10 39887058 39887384 -100429381 + L2 LINE L2 2916 3272 0 2391 97 3 0 chr10 39888107 39888415 -100428350 - AluSc SINE Alu 0 309 1 296 217 0 0 chr10 39888780 39888843 -100427922 - MIR SINE MIR -98 110 58 322 310 35 9 chr10 39889199 39889315 -100427450 - MIR SINE MIR -30 232 114 193 317 42 33 chr10 39889322 39889442 -100427323 - L2 LINE L2 -1018 2296 2176 422 355 16 67 chr10 39890381 39890652 -100426113 - MIR SINE MIR -1 261 5 222 209 0 0 chr10 39890655 39890698 -100426067 + (CATA)n Simple_repeat Simple_repeat 2 44 0 22 0 0 0 chr10 39890802 39890824 -100425941 + AT_rich Low_complexity Low_complexity 1 22 0 32 26 0 0 chr10 39890960 39890999 -100425766 + AT_rich Low_complexity Low_complexity 1 39 0 192 77 0 0 chr10 39891559 39891585 -100425180 + (TCCC)n Simple_repeat Simple_repeat 3 28 0 659 156 17 28 chr10 39891595 39891774 -100424991 + CT-rich Low_complexity Low_complexity 4 180 0 1146 186 14 23 chr10 39891788 39892008 -100424757 - AluJo SINE Alu -90 222 5 356 263 40 0 chr10 39892010 39892109 -100424656 + MIR SINE MIR 90 192 -70 430 321 106 13 chr10 39892552 39892789 -100423976 - MIR SINE MIR -1 261 3 209 179 0 0 chr10 39893514 39893553 -100423212 + (TG)n Simple_repeat Simple_repeat 2 40 0 241 230 0 23 chr10 39893799 39893886 -100422879 + CT-rich Low_complexity Low_complexity 3 87 0 365 270 109 7 chr10 39894082 39894219 -100422546 + MIR SINE MIR 49 199 -63 259 320 127 39 chr10 39894229 39894410 -100422355 - MIR SINE MIR -20 242 46 269 326 77 44 chr10 39895012 39895193 -100421572 + L2 LINE L2 2636 2822 -492 350 393 64 45 chr10 39895264 39895638 -100421127 + L2 LINE L2 2892 3272 0 238 392 10 0 chr10 39895677 39895774 -100420991 - L2 LINE L2 -18 3254 3157 38139 72 6 1 chr10 39895811 39901555 -100415210 + L1PA5 LINE L1 1 5778 -377 * 41492 46 1 2 chr10 39901554 39907710 -100409055 + L1PA3 LINE L1 1 6152 -3 3073 38 3 0 chr10 39907752 39908125 -100408640 + L1PA5 LINE L1 5770 6143 -11 33 25 0 0 chr10 39908125 39908165 -100408600 + AT_rich Low_complexity Low_complexity 1 40 0 1954 107 3 76 chr10 39908370 39908687 -100408078 + AluSg1 SINE Alu 1 294 -15 258 233 33 0 chr10 39908689 39908749 -100408016 + L1ME3A LINE L1 6051 6112 -58 306 277 18 18 chr10 39909564 39909676 -100407089 + GA-rich Low_complexity Low_complexity 4 115 0 336 313 44 38 chr10 39909708 39909868 -100406897 + MIR SINE MIR 17 177 -85 1694 167 51 0 chr10 39909885 39910178 -100406587 + AluSx SINE Alu 1 308 -4 308 311 13 93 chr10 39910705 39910856 -100405909 + MER5B DNA MER1_type 10 148 -30 334 330 73 6 chr10 39910887 39911066 -100405699 - L1MC5 LINE L1 -60 7901 7711 2078 175 29 3 chr10 39911104 39911486 -100405279 - L1PA15 LINE L1 -1 6164 5773 226 139 0 0 chr10 39911539 39911575 -100405190 - MER5B DNA MER1_type -140 38 3 * 276 330 104 17 chr10 39911575 39911689 -100405076 - MIR3 SINE MIR -48 160 37 236 265 26 43 chr10 39911923 39912040 -100404725 + MIR SINE MIR 104 218 -44 263 272 102 85 chr10 39912469 39912685 -100404080 + MIR SINE MIR 55 262 0 700 246 170 18 chr10 39913293 39913517 -100403248 + MIR SINE MIR 5 262 0 2503 197 21 55 chr10 39913539 39914060 -100402705 - L1MA7 LINE L1 -2 6289 5795 2213 125 0 6 chr10 39914060 39914371 -100402394 - AluSg SINE Alu -1 309 1 2503 197 21 55 chr10 39914371 39914524 -100402241 - L1MA7 LINE L1 -496 5795 5638 1209 177 36 0 chr10 39914531 39914780 -100401985 + L1 LINE L1 5101 5358 -788 369 0 0 0 chr10 39915606 39915647 -100401118 + (A)n Simple_repeat Simple_repeat 1 41 0 5313 37 2 6 chr10 39915703 39916348 -100400417 - L1PA4 LINE L1 -5 6150 5509 5941 42 0 0 chr10 39916348 39917241 -100399524 + L1PA4 LINE L1 4624 5516 -638 24 32 0 0 chr10 39917866 39917897 -100398868 + AT_rich Low_complexity Low_complexity 1 31 0 358 286 138 48 chr10 39918334 39918603 -100398162 + MER102b DNA MER1_type 48 340 -1 223 345 12 0 chr10 39918744 39918828 -100397937 + MIR SINE MIR 157 241 -21 276 293 163 0 chr10 39920055 39920178 -100396587 + MIR3 SINE MIR 39 181 -27 267 337 0 0 chr10 39920372 39920470 -100396295 + (TCCA)n Simple_repeat Simple_repeat 1 98 0 222 37 0 0 chr10 39920872 39920899 -100395866 + (TC)n Simple_repeat Simple_repeat 1 27 0 308 303 139 0 chr10 39920986 39921108 -100395657 - MIR SINE MIR -41 221 83 197 197 280 0 chr10 39921528 39921627 -100395138 - MIR SINE MIR -65 197 64 410 305 146 18 chr10 39921841 39922067 -100394698 - MIR SINE MIR -7 255 1 624 183 14 81 chr10 39922138 39922357 -100394408 + MER106A DNA MER1_type 1 199 -37 293 322 52 35 chr10 39922668 39922783 -100393982 - L2 LINE L2 -7 3265 3149 202 391 0 0 chr10 39923186 39923250 -100393515 - L2 LINE L2 -8 3264 3201 190 294 29 15 chr10 39923439 39923507 -100393258 - MIR SINE MIR -113 149 81 385 184 35 57 chr10 39924030 39924171 -100392594 - L1ME4a LINE L1 -22 6099 5962 407 349 20 48 chr10 39924456 39924705 -100392060 - L2 LINE L2 -4 3268 3027 226 301 41 57 chr10 39924980 39925103 -100391662 - L1ME4a LINE L1 -2154 5654 5534 336 359 36 48 chr10 39925136 39925384 -100391381 - MIR SINE MIR 0 262 18 228 331 169 0 chr10 39926103 39926257 -100390508 + MIR SINE MIR 11 190 -72 34 42 0 0 chr10 39926314 39926362 -100390403 + AT_rich Low_complexity Low_complexity 1 48 0 194 333 103 0 chr10 39926499 39926586 -100390179 + MIR SINE MIR 40 135 -73 958 236 69 5 chr10 39927793 39927996 -100388769 + MER58A DNA MER1_type 1 216 -8 355 314 14 43 chr10 39928457 39928597 -100388168 + L2 LINE L2 3137 3272 0 435 335 55 62 chr10 39928711 39929111 -100387654 + MLT1J LTR MaLR 110 506 -5 2106 116 0 11 chr10 39929197 39929481 -100387284 + AluSq SINE Alu 1 281 -32 324 352 64 30 chr10 39929548 39929781 -100386984 - MIR SINE MIR -15 247 7 1637 174 38 40 chr10 39930130 39930503 -100386262 + MLT1A2 LTR MaLR 1 372 -2 200 385 31 19 chr10 39931261 39931422 -100385343 - MIR SINE MIR -99 163 1 245 386 85 11 chr10 39931667 39931856 -100384909 - L3 LINE CR1 -1 1576 1374 698 339 5 5 chr10 39931861 39932082 -100384683 + MIR SINE MIR 23 243 -19 2007 123 10 3 chr10 39932113 39932405 -100384360 - AluSg SINE Alu -16 294 1 216 326 81 91 chr10 39932999 39933220 -100383545 + L2 LINE L2 3038 3256 -16 321 345 7 22 chr10 39933275 39933414 -100383351 - MIR3 SINE MIR -69 139 3 2465 40 0 17 chr10 39933467 39933768 -100382997 - AluY SINE Alu -15 296 1 492 298 77 34 chr10 39933957 39934192 -100382573 - MIR SINE MIR -10 252 8 950 296 94 27 chr10 39935132 39935534 -100381231 - LTR16A LTR ERVL -6 444 16 241 227 0 0 chr10 39935737 39935781 -100380984 + polypurine Low_complexity Low_complexity 3 46 0 2016 113 33 3 chr10 39936636 39936936 -100379829 + AluSc SINE Alu 1 309 0 206 183 21 21 chr10 39937079 39937172 -100379593 + (TA)n Simple_repeat Simple_repeat 2 94 0 250 318 19 19 chr10 39937411 39937565 -100379200 + L1ME2 LINE L1 5773 5926 -238 23 0 0 0 chr10 39937568 39937591 -100379174 + AT_rich Low_complexity Low_complexity 1 23 0 6894 59 27 8 chr10 39937612 39938492 -100378273 + MER11D LTR ERVK 1 897 0 356 393 12 0 chr10 39939029 39939192 -100377573 - L3 LINE CR1 -23 1554 1390 211 257 189 0 chr10 39939224 39939298 -100377467 + MIR SINE MIR 52 140 -68 213 322 104 17 chr10 39939372 39939487 -100377278 - L3 LINE CR1 -286 1291 1167 2021 106 29 0 chr10 39939545 39939818 -100376947 + AluSc SINE Alu 1 281 -28 2487 84 0 0 chr10 39939883 39940194 -100376571 - AluY SINE Alu 0 311 1 415 294 77 33 chr10 39940351 39940584 -100376181 + MIR SINE MIR 25 262 0 216 220 44 0 chr10 39941415 39941506 -100375259 + (TATATG)n Simple_repeat Simple_repeat 2 96 0 309 262 123 57 chr10 39941507 39941665 -100375100 - MIR SINE MIR -62 200 21 551 165 0 0 chr10 39942194 39942285 -100374480 + MSTC LTR MaLR 1 91 -337 781 207 75 46 chr10 39942851 39943025 -100373740 - MER20 DNA MER1_type -25 194 16 184 258 124 41 chr10 39943152 39943249 -100373516 - MIR SINE MIR -60 202 98 182 289 105 13 chr10 39943530 39943606 -100373159 - L2 LINE L2 -49 3264 3182 444 324 14 0 chr10 39943800 39943942 -100372823 + MIR SINE MIR 109 252 -10 351 222 0 0 chr10 39944702 39944774 -100371991 - L2 LINE L2 0 3272 3201 2251 93 0 0 chr10 39944809 39945099 -100371666 + AluSg1 SINE Alu 1 290 -19 26 30 0 0 chr10 39945181 39945214 -100371551 + AT_rich Low_complexity Low_complexity 1 33 0 2361 95 10 0 chr10 39945234 39945538 -100371227 - AluSq SINE Alu -6 307 1 182 371 11 0 chr10 39946578 39946667 -100370098 - MIR SINE MIR -120 142 53 183 286 41 88 chr10 39946847 39946994 -100369771 - L2 LINE L2 -73 3240 3101 317 361 13 13 chr10 39947672 39947827 -100368938 + MIR SINE MIR 98 252 -10 436 307 132 11 chr10 39948414 39948631 -100368134 - MIR SINE MIR -19 243 3 25 0 0 0 chr10 39948920 39948945 -100367820 + AT_rich Low_complexity Low_complexity 1 25 0 1356 19 0 0 chr10 39949722 39949880 -100366885 + L1PA2 LINE L1 5998 6155 0 3526 233 91 78 chr10 39949894 39951128 -100365637 - L1M4 LINE L1 -1242 4904 3686 7106 49 1 1 chr10 39951128 39952709 -100364056 - L1PA6 LINE L1 -5 6149 4570 2166 117 0 0 chr10 39952709 39952999 -100363766 - AluSg SINE Alu -11 299 10 3526 233 91 78 chr10 39952999 39953575 -100363190 - L1M4 LINE L1 -2459 3687 3071 232 352 19 0 chr10 39953578 39953683 -100363082 + MER94 DNA DNA 28 134 0 201 314 113 32 chr10 39953997 39954121 -100362644 - MIR SINE MIR -59 203 70 4324 182 23 39 chr10 39954855 39954983 -100361782 + L1MB3 LINE L1 5275 5404 -779 2591 74 14 0 chr10 39954983 39955333 -100361432 + THE1A LTR MaLR 1 355 0 11418 102 6 8 chr10 39955333 39956915 -100359850 + THE1A-int LTR MaLR 1 1580 0 2590 97 6 0 chr10 39956915 39957266 -100359499 + THE1A LTR MaLR 1 353 -2 4324 182 23 39 chr10 39957266 39958052 -100358713 + L1MB3 LINE L1 5401 6176 -7 526 302 74 10 chr10 39958295 39958497 -100358268 - MIR SINE MIR -16 246 32 274 268 70 0 chr10 39958669 39958740 -100358025 + L2 LINE L2 3238 3313 0 237 240 140 0 chr10 39960146 39960246 -100356519 + L1ME4a LINE L1 5936 6049 -72 529 312 51 58 chr10 39960545 39960837 -100355928 - L2 LINE L2 -2 3311 3022 377 257 59 6 chr10 39960856 39961016 -100355749 - L1MA10 LINE L1 -2 6332 6005 614 255 142 18 chr10 39961078 39961466 -100355299 - L1M4 LINE L1 -1211 4935 4454 2650 94 3 0 chr10 39961704 39962054 -100354711 - THE1A LTR MaLR 0 355 5 3793 102 0 11 chr10 39962329 39962871 -100353894 - L1PB1 LINE L1 -1 6150 5615 2370 149 41 1 chr10 39962875 39963605 -100353160 + L1PB1 LINE L1 4845 5597 -554 2197 287 258 14 chr10 39963605 39964936 -100351829 - L2 LINE L2 -281 3032 1375 483 316 160 40 chr10 39965124 39965899 -100350866 - L2 LINE L2 -191 3081 2220 211 331 41 16 chr10 39966548 39966669 -100350096 - MIR SINE MIR -32 230 107 205 289 0 24 chr10 39967171 39967254 -100349511 + MIR SINE MIR 155 235 -27 324 102 0 0 chr10 39967362 39967411 -100349354 + (TG)n Simple_repeat Simple_repeat 2 50 0 209 350 41 0 chr10 39967896 39967993 -100348772 - L2 LINE L2 -528 2786 2686 726 315 99 41 chr10 39968003 39968517 -100348248 + L2 LINE L2 2432 2975 -339 188 242 15 61 chr10 39968779 39968845 -100347920 - L2 LINE L2 -84 3229 3167 343 366 84 0 chr10 39969486 39969688 -100347077 - MIR SINE MIR -42 220 2 22 35 0 0 chr10 39969690 39969719 -100347046 + AT_rich Low_complexity Low_complexity 1 29 0 1647 190 28 43 chr10 39970570 39970964 -100345801 - MER89 LTR ERV1 0 559 172 204 309 128 0 chr10 39971059 39971153 -100345612 - L2 LINE L2 -262 3010 2905 932 226 26 52 chr10 39971833 39972022 -100344743 + MER58A DNA MER1_type 1 184 -2236 2244 114 0 0 chr10 39972022 39972330 -100344435 - AluSg SINE Alu -2 308 1 932 226 26 52 chr10 39972330 39972370 -100344395 + MER58A DNA MER1_type 184 224 0 210 207 52 0 chr10 39972471 39972529 -100344236 - MIR SINE MIR -102 160 100 213 391 51 7 chr10 39972820 39972958 -100343807 + MIR SINE MIR 44 187 -75 779 297 60 87 chr10 39972966 39973575 -100343190 - L2 LINE L2 -5 3308 2715 180 307 50 50 chr10 39973541 39973642 -100343123 + MIR SINE MIR 162 262 0 * 188 338 26 0 chr10 39973948 39974025 -100342740 + L2 LINE L2 2708 2786 -528 400 188 328 0 chr10 39977721 39977849 -100338916 - MER5A DNA MER1_type 0 189 20 210 150 0 0 chr10 39978364 39978404 -100338361 + (TA)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr10 39978832 39978853 -100337912 + AT_rich Low_complexity Low_complexity 1 21 0 400 188 328 0 chr10 39980123 39980251 -100336514 - MER5A DNA MER1_type 0 189 20 435 106 0 0 chr10 39980766 39980832 -100335933 + (TA)n Simple_repeat Simple_repeat 2 67 0 21 0 0 0 chr10 39981289 39981310 -100335455 + AT_rich Low_complexity Low_complexity 1 21 0 1811 91 0 0 chr10 39981721 39981953 -100334812 + AluY SINE Alu 1 232 -79 1785 168 0 23 chr10 39982048 39982351 -100334414 - AluSx SINE Alu -16 296 1 1588 184 20 3 chr10 39983916 39984220 -100332545 + AluSx SINE Alu 1 309 -3 1980 90 53 23 chr10 39984343 39984644 -100332121 - AluY SINE Alu -1 310 1 1172 92 0 0 chr10 39985606 39985758 -100331007 + AluY SINE Alu 3 154 -157 232 241 0 0 chr10 39985758 39985816 -100330949 - MER5A DNA MER1_type -123 66 9 255 79 0 0 chr10 39986069 39986107 -100330658 + (T)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr10 39986589 39986610 -100330155 + AT_rich Low_complexity Low_complexity 1 21 0 285 155 0 0 chr10 39987918 39987976 -100328789 + (TG)n Simple_repeat Simple_repeat 1 58 0 220 189 0 0 chr10 39991890 39991927 -100324838 + (TATG)n Simple_repeat Simple_repeat 4 40 0 21 0 0 0 chr10 39992352 39992373 -100324392 + AT_rich Low_complexity Low_complexity 1 21 0 1768 99 0 0 chr10 39992785 39993017 -100323748 + AluY SINE Alu 1 232 -79 1787 152 0 33 chr10 39993112 39993415 -100323350 - AluSg1 SINE Alu -16 293 1 903 182 0 6 chr10 39994981 39995146 -100321619 + AluSq SINE Alu 1 164 -149 524 146 0 0 chr10 39995239 39995321 -100321444 + AluY SINE Alu 4 85 -226 1460 118 9 26 chr10 39995421 39995649 -100321116 + AluSp SINE Alu 87 310 -3 2284 96 0 13 chr10 39995651 39995965 -100320800 + AluY SINE Alu 1 310 -1 2237 84 7 17 chr10 39995973 39996269 -100320496 + AluSg SINE Alu 5 297 -13 1130 148 14 67 chr10 39996592 39996815 -100319950 - AluSp SINE Alu -81 232 22 489 161 0 11 chr10 39996828 39996915 -100319850 + AluSp SINE Alu 54 139 -174 2258 109 3 0 chr10 39998504 39998815 -100317950 + AluSx SINE Alu 1 312 0 447 266 27 49 chr10 40000923 40001107 -100315658 - MER104 DNA Tc2 0 180 1 605 274 100 69 chr10 40001199 40001452 -100315313 - MIR SINE MIR -1 261 6 40 0 0 0 chr10 40001869 40001909 -100314856 + AT_rich Low_complexity Low_complexity 1 40 0 290 321 19 0 chr10 40002551 40002657 -100314108 + MER102b DNA MER1_type 233 340 -1 24 67 0 0 chr10 40002710 40002755 -100314010 + AT_rich Low_complexity Low_complexity 1 45 0 241 320 80 13 chr10 40003659 40003734 -100313031 - L2 LINE L2 -50 3222 3143 2031 145 3 10 chr10 40004455 40004759 -100312006 + AluSx SINE Alu 2 303 -9 208 176 0 20 chr10 40004885 40004936 -100311829 + T-rich Low_complexity Low_complexity 3 52 0 292 342 85 20 chr10 40005020 40005219 -100311546 + MIR SINE MIR 20 231 -31 642 181 0 0 chr10 40006975 40007080 -100309685 + U6 snRNA snRNA 1 105 -2 30 45 0 0 chr10 40007532 40007576 -100309189 + AT_rich Low_complexity Low_complexity 1 44 0 750 167 0 0 chr10 40007704 40007830 -100308935 - FLAM_C SINE Alu -17 126 1 215 326 103 11 chr10 40007904 40008060 -100308705 - MIR SINE MIR -41 221 58 300 70 0 0 chr10 40008533 40008576 -100308189 + (TG)n Simple_repeat Simple_repeat 2 44 0 198 0 0 0 chr10 40008575 40008597 -100308168 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 36 40 0 0 chr10 40008864 40008914 -100307851 + AT_rich Low_complexity Low_complexity 1 50 0 15315 61 3 5 chr10 40008986 40010942 -100305823 + L1P LINE L1 6 1957 -4189 1998 219 32 7 chr10 40010999 40011441 -100305324 - LTR22 LTR ERVK -56 453 1 216 0 0 0 chr10 40011466 40011490 -100305275 + (ATTG)n Simple_repeat Simple_repeat 1 24 0 261 211 0 18 chr10 40011490 40011542 -100305223 - FLAM SINE Alu -16 117 67 1663 209 55 60 chr10 40011593 40012029 -100304736 - Tigger2a DNA MER2_type 0 434 1 1809 155 19 23 chr10 40013037 40013346 -100303419 + AluSx SINE Alu 3 310 -2 1914 145 16 16 chr10 40014318 40014628 -100302137 - AluSg SINE Alu 0 310 1 546 294 98 20 chr10 40014632 40014887 -100301878 - MLT1L LTR MaLR -221 394 120 939 265 5 5 chr10 40015067 40015120 -100301645 - MER58A DNA MER1_type -2196 224 172 2110 139 0 0 chr10 40015120 40015415 -100301350 + AluSg SINE Alu 2 296 -14 939 265 5 5 chr10 40015415 40015584 -100301181 - MER58A DNA MER1_type -2247 173 2 29 90 0 0 chr10 40016488 40016566 -100300199 + AT_rich Low_complexity Low_complexity 1 78 0 2026 104 3 77 chr10 40016939 40017266 -100299499 + AluSx SINE Alu 1 303 -9 3016 119 6 53 chr10 40018228 40018741 -100298024 - LTR22B LTR ERVK -3 489 1 259 258 16 0 chr10 40019886 40019948 -100296817 - MER5A DNA MER1_type -118 71 9 30 0 0 0 chr10 40020206 40020236 -100296529 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr10 40021762 40021788 -100294977 + AT_rich Low_complexity Low_complexity 1 26 0 252 158 0 0 chr10 40022059 40022116 -100294649 + (TG)n Simple_repeat Simple_repeat 2 58 0 420 216 302 0 chr10 40026022 40026161 -100290604 - MER5A DNA MER1_type 0 189 9 213 94 0 0 chr10 40026657 40026689 -100290076 + (TATG)n Simple_repeat Simple_repeat 4 35 0 2171 99 7 0 chr10 40027546 40027840 -100288925 + AluY SINE Alu 1 296 -15 22 35 0 0 chr10 40028107 40028136 -100288629 + AT_rich Low_complexity Low_complexity 1 29 0 1599 168 0 25 chr10 40029139 40029419 -100287346 - AluSx SINE Alu -39 273 1 1544 196 20 7 chr10 40030981 40031287 -100285478 + AluSx SINE Alu 1 310 -2 2038 80 53 17 chr10 40031445 40031745 -100285020 - AluY SINE Alu 0 311 1 233 319 32 0 chr10 40032077 40032171 -100284594 - Charlie1 DNA MER1_type -2563 198 102 22 0 0 0 chr10 40032355 40032377 -100284388 + AT_rich Low_complexity Low_complexity 1 22 0 1102 105 0 7 chr10 40032720 40032873 -100283892 + AluY SINE Alu 3 154 -157 310 190 0 0 chr10 40032873 40032931 -100283834 - MER5A DNA MER1_type -123 66 9 29 0 0 0 chr10 40033201 40033230 -100283535 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 40033729 40033750 -100283015 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 40034761 40034789 -100281976 + AT_rich Low_complexity Low_complexity 1 28 0 285 155 0 0 chr10 40035062 40035120 -100281645 + (TG)n Simple_repeat Simple_repeat 1 58 0 1896 90 57 23 chr10 40035494 40035794 -100280971 - AluY SINE Alu -1 310 1 233 319 32 0 chr10 40036126 40036220 -100280545 - Charlie1 DNA MER1_type -2563 198 102 1081 105 0 0 chr10 40036766 40036918 -100279847 + AluY SINE Alu 3 154 -157 253 224 0 0 chr10 40036918 40036976 -100279789 - MER5A DNA MER1_type -123 66 9 31 26 0 0 chr10 40037224 40037262 -100279503 + AT_rich Low_complexity Low_complexity 1 38 0 285 155 0 0 chr10 40039096 40039154 -100277611 + (TG)n Simple_repeat Simple_repeat 1 58 0 337 233 0 0 chr10 40043145 40043218 -100273547 - MER5A DNA MER1_type -108 81 9 19783 60 16 2 chr10 40043377 40046627 -100270138 + L1PA6 LINE L1 2729 6018 -136 6815 60 8 0 chr10 40046727 40048421 -100268344 + L1PA6 LINE L1 4419 6154 0 321 267 139 0 chr10 40048613 40048699 -100268066 - MER5A DNA MER1_type -83 106 9 2156 111 0 16 chr10 40049317 40049632 -100267133 + AluSx SINE Alu 1 310 -2 26 30 0 0 chr10 40050432 40050465 -100266300 + AT_rich Low_complexity Low_complexity 1 33 0 738 323 8 23 chr10 40051100 40051357 -100265408 + L1PA15-16 LINE L1 1309 1561 -5288 511 316 31 18 chr10 40051354 40051579 -100265186 + L1PA15-16 LINE L1 1350 1577 -5273 * 587 199 37 27 chr10 40051702 40051920 -100264845 - L1MC1 LINE L1 -343 6059 5796 * 657 249 77 30 chr10 40051918 40052030 -100264735 - L1MC1 LINE L1 -2402 3813 3708 2086 201 34 0 chr10 40052030 40052444 -100264321 - MSTA LTR MaLR 0 428 1 657 249 77 30 chr10 40052444 40052628 -100264137 - L1MC1 LINE L1 -2507 3708 3503 6737 70 5 0 chr10 40052777 40053937 -100262828 - L1PA7 LINE L1 -3 6151 4992 7027 30 10 0 chr10 40053952 40054786 -100261979 - L1PA4 LINE L1 -2 6153 5312 5981 42 1 1 chr10 40054787 40055524 -100261241 + L1P LINE L1 4099 4835 -1311 1102 106 6 0 chr10 40055521 40055681 -100261084 - L1PA7 LINE L1 -1139 5007 4847 * 443 321 68 16 chr10 40055681 40055930 -100260835 - L1MC1 LINE L1 -2724 3491 3230 1387 246 20 14 chr10 40055947 40056305 -100260460 - MLT1A1 LTR MaLR 0 365 6 933 265 43 55 chr10 40056311 40056733 -100260032 - L1MC1 LINE L1 -3009 3206 2790 1284 227 40 99 chr10 40056749 40057351 -100259414 - L1MC1 LINE L1 -3524 2691 2193 213 39 0 0 chr10 40057351 40057377 -100259388 + (TA)n Simple_repeat Simple_repeat 1 26 0 1284 227 40 99 chr10 40057377 40057613 -100259152 - L1MC1 LINE L1 -4022 2193 1944 309 268 35 63 chr10 40057763 40057905 -100258860 - L1MC1 LINE L1 -5265 1131 994 1081 346 73 24 chr10 40057909 40058582 -100258183 - L1MC1 LINE L1 -5651 745 40 338 422 64 15 chr10 40058590 40058917 -100257848 + L2 LINE L2 2930 3272 0 23 33 0 0 chr10 40059852 40059882 -100256883 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr10 40060019 40060043 -100256722 + AT_rich Low_complexity Low_complexity 1 24 0 25 51 0 0 chr10 40061290 40061329 -100255436 + AT_rich Low_complexity Low_complexity 1 39 0 425 50 17 0 chr10 40062797 40062857 -100253908 + (TA)n Simple_repeat Simple_repeat 1 61 0 280 369 62 23 chr10 40063580 40063756 -100253009 - L2 LINE L2 -410 2904 2722 2412 192 21 29 chr10 40064893 40065414 -100251351 - L1MB8 LINE L1 -9 6169 5653 252 215 154 0 chr10 40065929 40065994 -100250771 - Tigger4(Zombi) DNA MER2_type -2654 77 3 340 224 0 0 chr10 40066007 40066065 -100250700 - Tigger5 DNA MER2_type -6 2317 2260 23 33 0 0 chr10 40066599 40066629 -100250136 + AT_rich Low_complexity Low_complexity 1 30 0 27 81 0 0 chr10 40066742 40066804 -100249961 + AT_rich Low_complexity Low_complexity 1 62 0 320 127 25 76 chr10 40067186 40067265 -100249500 + MER34C LTR ERV1 423 497 -88 218 105 26 0 chr10 40067285 40067323 -100249442 + (TA)n Simple_repeat Simple_repeat 1 39 0 28 48 0 0 chr10 40067933 40067975 -100248790 + AT_rich Low_complexity Low_complexity 1 42 0 1080 239 71 14 chr10 40068607 40068904 -100247861 - L1MB8 LINE L1 -5 6173 5860 24 0 0 0 chr10 40068904 40068928 -100247837 + AT_rich Low_complexity Low_complexity 1 24 0 2538 17 0 7 chr10 40068928 40069226 -100247539 - L1PA5 LINE L1 -13 6141 5846 433 17 172 0 chr10 40069224 40069282 -100247483 + L1P LINE L1 2189 2256 -3890 * 2637 200 74 10 chr10 40069287 40070319 -100246446 - L1MB8 LINE L1 -304 5874 4771 726 300 95 5 chr10 40071678 40071937 -100244828 - MLT1G1 LTR MaLR -11 584 217 281 163 0 0 chr10 40072087 40072130 -100244635 - MLT1G1 LTR MaLR -441 126 84 1149 171 27 35 chr10 40072164 40072421 -100244344 - L1MA5 LINE L1 -3 6297 6043 1025 95 23 95 chr10 40072593 40072814 -100243951 - L1MA3 LINE L1 -1 6304 6100 299 186 0 0 chr10 40073961 40074020 -100242745 - L1MA9 LINE L1 -37 6275 6217 363 23 0 0 chr10 40075463 40075507 -100241258 + (TA)n Simple_repeat Simple_repeat 1 44 0 189 0 0 0 chr10 40075506 40075527 -100241238 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 760 178 53 20 chr10 40075573 40075725 -100241040 + FAM SINE Alu 1 48 -1 32 26 0 0 chr10 40077112 40077151 -100239614 + AT_rich Low_complexity Low_complexity 1 39 0 220 309 0 0 chr10 40077301 40077356 -100239409 + L2 LINE L2 3211 3265 -7 2462 72 3 0 chr10 40078569 40078876 -100237889 - AluY SINE Alu -3 308 1 258 333 44 0 chr10 40079997 40080111 -100236654 + MIR3 SINE MIR 38 156 -52 1003 47 0 0 chr10 40081146 40081274 -100235491 - L1PA4 LINE L1 -3 6152 6025 40 21 0 0 chr10 40084090 40084137 -100232628 + AT_rich Low_complexity Low_complexity 1 47 0 27 87 0 0 chr10 40084156 40084225 -100232540 + AT_rich Low_complexity Low_complexity 1 69 0 1215 261 91 7 chr10 40084691 40085372 -100231393 - L1MC4 LINE L1 -140 7902 7012 2185 221 108 13 chr10 40085400 40085943 -100230822 - Tigger2 DNA MER2_type -2029 689 76 2447 39 0 32 chr10 40085943 40086251 -100230514 - AluY SINE Alu -12 299 2 2185 221 108 13 chr10 40086251 40086336 -100230429 - Tigger2 DNA MER2_type -2642 76 1 2611 194 20 17 chr10 40086390 40086978 -100229787 - MER6A DNA MER2_type -1 604 275 893 247 92 4 chr10 40087086 40087325 -100229440 - MER6A DNA MER2_type -344 261 2 590 265 131 39 chr10 40087907 40088296 -100228469 - L1M4 LINE L1 -1645 4501 4077 1161 275 32 47 chr10 40088380 40088885 -100227880 - MLT1E LTR MaLR 0 593 102 253 273 62 55 chr10 40088979 40089235 -100227530 - L1M4 LINE L1 -2160 3986 3729 552 202 75 87 chr10 40089550 40089723 -100227042 - MER20 DNA MER1_type -1 218 48 481 179 0 0 chr10 40089749 40089827 -100226938 + AluS SINE Alu 3 80 -232 1057 143 61 15 chr10 40089841 40090090 -100226675 - LTR54 LTR ERV1 0 510 219 1250 104 14 45 chr10 40090313 40090398 -100226367 + L1PA13 LINE L1 5951 6037 -126 2448 57 0 35 chr10 40090398 40090714 -100226051 + AluY SINE Alu 1 305 -6 1250 104 14 45 chr10 40090714 40090848 -100225917 + L1PA13 LINE L1 6037 6163 0 289 305 61 49 chr10 40093039 40093203 -100223562 - L2 LINE L2 -203 3069 2904 1710 206 19 19 chr10 40093328 40093693 -100223072 + MLT1A1 LTR MaLR 1 365 0 529 235 90 12 chr10 40095502 40095668 -100221097 + MIR SINE MIR 74 252 -10 681 177 89 0 chr10 40096014 40096138 -100220627 + MER3 DNA MER1_type 3 137 -72 3211 195 25 68 chr10 40096138 40096447 -100220318 - L1MB7 LINE L1 -10 6174 5853 2313 97 3 10 chr10 40096447 40096758 -100220007 - AluY SINE Alu -2 309 1 3211 195 25 68 chr10 40096758 40097482 -100219283 - L1MB7 LINE L1 -331 5853 5099 2404 94 3 0 chr10 40097482 40097790 -100218975 - AluY SINE Alu -2 309 1 3211 195 25 68 chr10 40097790 40097967 -100218798 - L1MB7 LINE L1 -1085 5099 5025 1356 181 34 4 chr10 40097967 40098233 -100218532 + L1PB4 LINE L1 5883 6156 0 3211 195 25 68 chr10 40098233 40098259 -100218506 - L1MB7 LINE L1 -1159 5025 4999 990 160 15 15 chr10 40098272 40098472 -100218293 - L1MB4 LINE L1 -2 6178 5979 315 233 0 0 chr10 40098484 40098557 -100218208 + MER3 DNA MER1_type 137 209 0 492 314 117 21 chr10 40098643 40099065 -100217700 + L2 LINE L2 2661 3128 -185 1072 162 23 6 chr10 40099074 40099247 -100217518 - AluJo SINE Alu -21 291 116 264 330 188 0 chr10 40099298 40099410 -100217355 + L2 LINE L2 3180 3312 -1 5877 118 2 6 chr10 40099562 40100551 -100216214 - L1P LINE L1 -2354 3792 2808 2860 76 0 8 chr10 40100569 40100950 -100215815 + L1PA8 LINE L1 5788 6165 -7 1351 251 62 44 chr10 40100974 40101490 -100215275 + L1ME3A LINE L1 4507 5044 -1111 2296 109 0 0 chr10 40101490 40101794 -100214971 + AluY SINE Alu 1 304 -7 1351 251 62 44 chr10 40101794 40102055 -100214710 + L1ME3A LINE L1 5044 5299 -856 1930 251 100 14 chr10 40102092 40102741 -100214024 + L1ME3A LINE L1 5408 6112 -58 312 243 59 22 chr10 40102804 40102940 -100213825 + L1MC5 LINE L1 7785 7925 -36 1412 149 43 0 chr10 40103609 40103864 -100212901 + L1PA16 LINE L1 5896 6161 -5 252 288 120 39 chr10 40105591 40105924 -100210841 - L1ME4a LINE L1 -31 6090 5731 3417 131 0 42 chr10 40106066 40106615 -100210150 - MER1A DNA MER1_type -1 526 1 563 261 0 50 chr10 40106618 40106798 -100209967 - L2 LINE L2 -684 2630 2460 239 260 30 80 chr10 40108044 40108144 -100208621 - MIR3 SINE MIR 0 208 114 274 325 130 15 chr10 40108194 40108575 -100208190 + MER115 DNA AcHobo 6 443 -250 244 108 0 0 chr10 40109386 40109423 -100207342 - tRNA-Met-i tRNA tRNA -38 37 1 2119 125 3 3 chr10 40109433 40109736 -100207029 - AluSx SINE Alu -3 309 7 2009 142 17 0 chr10 40109771 40110067 -100206698 - AluSq SINE Alu -12 301 1 2145 129 0 0 chr10 40110240 40110534 -100206231 - AluSq SINE Alu -19 294 1 215 274 150 43 chr10 40111285 40111458 -100205307 + MIR SINE MIR 38 225 -37 317 271 77 50 chr10 40111580 40111665 -100205100 + MER5A DNA MER1_type 4 85 -104 318 26 0 0 chr10 40111665 40111704 -100205061 + (TC)n Simple_repeat Simple_repeat 2 40 0 477 0 0 0 chr10 40111705 40111758 -100205007 + (CA)n Simple_repeat Simple_repeat 2 54 0 317 271 77 50 chr10 40111758 40111851 -100204914 + MER5A DNA MER1_type 84 189 0 181 172 0 0 chr10 40113864 40113893 -100202872 - MIR SINE MIR -14 248 220 13866 104 3 3 chr10 40114342 40116788 -100199977 - L1P3 LINE L1 -532 5622 3178 3444 43 0 0 chr10 40116783 40117227 -100199538 - L1P2 LINE L1 -378 5776 5333 * 4707 115 47 76 chr10 40117227 40118073 -100198692 - LTR12 LTR ERV1 0 826 5 7953 123 14 14 chr10 40118079 40119852 -100196913 - HERV9 LTR ERV1 0 8399 504 942 196 45 11 chr10 40121118 40121297 -100195468 + AluJo SINE Alu 121 305 -7 2045 136 3 0 chr10 40121910 40122204 -100194561 + AluSx SINE Alu 1 295 -17 1811 171 0 0 chr10 40123542 40123869 -100192896 - AluY SINE Alu 0 327 1 1704 124 4 19 chr10 40124837 40125103 -100191662 + AluY SINE Alu 1 262 -49 3361 74 11 0 chr10 40125233 40125666 -100191099 - HERV9 LTR ERV1 -1544 6855 6418 39644 102 28 27 chr10 40125666 40133509 -100183256 - HERV9 LTR ERV1 0 2438 17 4303 45 2 1 chr10 40133512 40134055 -100182710 - L1P LINE L1 -804 5347 4807 * 14278 158 97 27 chr10 40134053 40137020 -100179745 - L1P LINE L1 -2962 3184 12 233 338 88 7 chr10 40137302 40137450 -100179315 + MLT1K LTR MaLR 17 176 -412 2412 157 105 10 chr10 40137634 40138043 -100178722 + MER83 LTR ERV1 1 448 0 567 231 90 63 chr10 40138098 40138353 -100178412 + L1ME3A LINE L1 5904 6165 -5 21 0 0 0 chr10 40139665 40139686 -100177079 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 40140443 40140464 -100176301 + AT_rich Low_complexity Low_complexity 1 21 0 2288 105 0 0 chr10 40140775 40141070 -100175695 - AluSg SINE Alu -15 295 1 270 56 0 0 chr10 40142189 40142225 -100174540 + (TC)n Simple_repeat Simple_repeat 2 37 0 252 0 0 0 chr10 40142225 40142253 -100174512 + (CA)n Simple_repeat Simple_repeat 1 28 0 395 326 126 49 chr10 40143089 40143498 -100173267 - L2 LINE L2 -377 2937 2476 2507 210 58 67 chr10 40143498 40144227 -100172538 - MER72 LTR ERV1 0 722 1 395 326 126 49 chr10 40144227 40144347 -100172418 - L2 LINE L2 -838 2476 2367 546 206 31 0 chr10 40144587 40144684 -100172081 + Tigger3(Golem) DNA MER2_type 2928 3027 -2 1352 194 4 16 chr10 40145244 40145502 -100171263 + 7SLRNA srpRNA srpRNA 54 308 -12 22 0 0 0 chr10 40145502 40145524 -100171241 + AT_rich Low_complexity Low_complexity 1 22 0 360 0 0 0 chr10 40145524 40145564 -100171201 + (TG)n Simple_repeat Simple_repeat 1 40 0 431 257 184 7 chr10 40145581 40145733 -100171032 + MIR SINE MIR 25 203 -59 210 143 0 0 chr10 40146368 40146403 -100170362 + (GA)n Simple_repeat Simple_repeat 2 36 0 369 317 67 12 chr10 40146784 40146948 -100169817 - MIR SINE MIR -88 174 2 509 278 168 0 chr10 40148799 40148972 -100167793 - MIR SINE MIR -22 240 39 1276 203 63 40 chr10 40148979 40149328 -100167437 + MLT1A2 LTR MaLR 1 357 -17 585 158 20 0 chr10 40150804 40150905 -100165860 - HY1 scRNA scRNA 0 112 10 2410 251 40 15 chr10 40151040 40151716 -100165049 + L1ME2 LINE L1 5456 6148 -16 1295 179 22 93 chr10 40152460 40152772 -100163993 - AluJo SINE Alu -12 290 1 618 133 47 0 chr10 40153538 40153666 -100163099 + GA-rich Low_complexity Low_complexity 3 136 0 287 87 22 0 chr10 40154251 40154297 -100162468 - L1MA4A LINE L1 -6 6297 6251 396 286 92 5 chr10 40155064 40155270 -100161495 - L1ME LINE L1 -304 5817 5594 916 196 45 11 chr10 40157184 40157363 -100159402 + AluJo SINE Alu 121 305 -7 2024 139 3 0 chr10 40157976 40158270 -100158495 + AluSx SINE Alu 1 295 -17 1745 171 0 4 chr10 40159607 40159934 -100156831 - AluSg SINE Alu 0 326 1 252 0 0 0 chr10 40160101 40160129 -100156636 + (T)n Simple_repeat Simple_repeat 1 28 0 2055 147 0 3 chr10 40160671 40160984 -100155781 - AluSx SINE Alu 0 312 1 4994 62 9 0 chr10 40163931 40164513 -100152252 - LTR14C LTR ERVK 0 587 1 1482 205 27 104 chr10 40165796 40166323 -100150442 - MLT1E2 LTR MaLR -137 489 4 256 275 81 38 chr10 40166347 40166558 -100150207 - L1MEd LINE L1 -5219 900 681 354 304 30 30 chr10 40166599 40166767 -100149998 - L1MEd LINE L1 -5554 565 398 272 224 13 66 chr10 40166832 40166908 -100149857 - L1MEd LINE L1 -5744 375 304 256 268 14 0 chr10 40167079 40167150 -100149615 - L1MEd LINE L1 -6046 73 2 211 226 148 61 chr10 40167196 40167311 -100149454 + L2 LINE L2 1891 2015 -1299 1980 153 41 25 chr10 40167367 40167734 -100149031 - L1PA13 LINE L1 0 6163 5791 2147 111 3 33 chr10 40167975 40168282 -100148483 - AluSp SINE Alu -14 299 2 1953 145 0 0 chr10 40168283 40168565 -100148200 - AluSq SINE Alu -31 282 1 1603 228 58 90 chr10 40168579 40169211 -100147554 + LTR9 LTR ERV1 1 612 0 18761 175 41 29 chr10 40169211 40170636 -100146129 + HUERS-P3 LTR ERV1 1 1408 -7511 2259 106 3 0 chr10 40170636 40170939 -100145826 + AluY SINE Alu 1 304 -7 18761 175 41 29 chr10 40170939 40172803 -100143962 + HUERS-P3 LTR ERV1 1408 3338 -5581 2167 17 0 0 chr10 40172803 40173039 -100143726 - AluYb8 SINE Alu -11 307 72 18761 175 41 29 chr10 40173039 40173315 -100143450 + HUERS-P3 LTR ERV1 3338 3609 -5310 1153 199 32 0 chr10 40173315 40173531 -100143234 + HUERS-P3 LTR ERV1 6016 6238 -2681 974 282 72 9 chr10 40173531 40173850 -100142915 + LTR19C LTR ERV1 441 779 0 258 309 79 29 chr10 40173855 40173994 -100142771 + L2 LINE L2 2702 2847 -467 236 256 0 39 chr10 40174015 40174093 -100142672 - LTR67 LTR ERVL 0 557 483 3875 110 4 4 chr10 40174548 40175059 -100141706 + MER9 LTR ERVK 1 511 0 28 0 0 0 chr10 40175274 40175302 -100141463 + AT_rich Low_complexity Low_complexity 1 28 0 1057 188 43 13 chr10 40175412 40175646 -100141119 - L1PB2 LINE L1 -4284 2579 2339 * 8762 204 14 54 chr10 40175634 40178345 -100138420 + L1PB2 LINE L1 2573 5247 -1615 1507 173 34 43 chr10 40178345 40178669 -100138096 + THE1C LTR MaLR 1 321 -54 686 43 75 0 chr10 40178675 40178869 -100137896 + (TA)n Simple_repeat Simple_repeat 1 208 0 28 0 0 0 chr10 40178879 40178907 -100137858 + AT_rich Low_complexity Low_complexity 1 28 0 253 220 20 0 chr10 40178915 40178965 -100137800 + THE1C LTR MaLR 305 355 0 3983 191 33 16 chr10 40178979 40180391 -100136374 + L1PB2 LINE L1 5258 6694 -173 695 138 76 0 chr10 40180399 40180544 -100136221 + L1PB2 LINE L1 5254 5409 -742 823 116 77 7 chr10 40180547 40180702 -100136063 + L1PB2 LINE L1 5984 6149 -2 29 0 0 0 chr10 40180702 40180731 -100136034 + AT_rich Low_complexity Low_complexity 1 29 0 3625 186 41 11 chr10 40181194 40181997 -100134768 - L1MA4A LINE L1 -1 7004 6178 4058 17 0 2 chr10 40182002 40182469 -100134296 - L1PA3 LINE L1 -7 6148 5683 7430 218 85 23 chr10 40182470 40183552 -100133213 - L1MA4A LINE L1 -744 6104 5091 1991 143 10 3 chr10 40183552 40183859 -100132906 - AluSx SINE Alu -3 309 1 7430 218 85 23 chr10 40183859 40185167 -100131598 - L1MA4A LINE L1 -1757 5091 3632 274 30 0 0 chr10 40185190 40185223 -100131542 + L1PA6 LINE L1 5895 5927 -227 27 0 0 0 chr10 40187496 40187523 -100129242 + AT_rich Low_complexity Low_complexity 1 27 0 1914 236 50 43 chr10 40187694 40187857 -100128908 - L1MA4A LINE L1 -3258 3590 3430 2074 96 0 0 chr10 40187857 40188173 -100128592 - AluY SINE Alu 0 318 3 1914 236 50 43 chr10 40188173 40188993 -100127772 - L1MA4A LINE L1 -3418 3430 2602 3750 230 45 20 chr10 40189003 40190801 -100125964 - L1M2 LINE L1 -3226 3623 1776 587 204 14 14 chr10 40190802 40190949 -100125816 + L1MA10 LINE L1 6184 6330 -4 1925 254 60 21 chr10 40190953 40191468 -100125297 + MLT1H1 LTR MaLR 19 553 -2 3076 302 31 37 chr10 40191651 40191736 -100125029 - L1M2 LINE L1 -5036 1814 1730 2279 77 0 13 chr10 40191736 40192035 -100124730 + AluY SINE Alu 2 296 -15 3076 302 31 37 chr10 40192035 40193094 -100123671 - L1M2 LINE L1 -5120 1730 677 1307 291 61 104 chr10 40193195 40193869 -100122896 - L1M2 LINE L1 -6200 649 5 475 252 147 28 chr10 40193870 40194088 -100122677 - L1M4 LINE L1 -1828 4318 4075 2878 82 14 5 chr10 40194130 40194544 -100122221 - L1PA6 LINE L1 -11 6143 5726 428 286 5 70 chr10 40195667 40195852 -100120913 + MLT1D LTR MaLR 3 175 -330 23 0 0 0 chr10 40196177 40196200 -100120565 + AT_rich Low_complexity Low_complexity 1 23 0 300 277 135 0 chr10 40197853 40198001 -100118764 - L1MEc LINE L1 -4916 1480 1313 1845 92 46 11 chr10 40198034 40198295 -100118470 - AluY SINE Alu -7 304 35 2314 94 0 0 chr10 40198297 40198606 -100118159 - AluY SINE Alu -2 309 1 23 0 0 0 chr10 40198617 40198640 -100118125 + AT_rich Low_complexity Low_complexity 1 23 0 664 163 36 48 chr10 40200025 40200191 -100116574 + L1MA7 LINE L1 5980 6143 -148 * 2502 198 64 29 chr10 40200189 40200780 -100115985 - L1MA4A LINE L1 -11 6292 5681 8891 222 35 19 chr10 40200788 40201296 -100115469 - L1MA4A LINE L1 -1474 4672 4174 5420 149 25 39 chr10 40201296 40202381 -100114384 + MER11C LTR ERVK 2 1071 0 8891 222 35 19 chr10 40202381 40204228 -100112537 - L1MA4A LINE L1 -1972 4174 2279 23 33 0 0 chr10 40204466 40204496 -100112269 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr10 40205223 40205259 -100111506 + AT_rich Low_complexity Low_complexity 1 36 0 1845 137 0 17 chr10 40205494 40205793 -100110972 - AluSq SINE Alu -14 299 6 1129 283 67 40 chr10 40205860 40206702 -100110063 + L1MB7 LINE L1 3396 4259 -1887 23 54 0 0 chr10 40206749 40206786 -100109979 + AT_rich Low_complexity Low_complexity 1 37 0 1291 301 72 17 chr10 40206786 40208244 -100108521 + L1MB7 LINE L1 4472 6174 -10 1781 220 64 10 chr10 40208374 40208779 -100107986 - L1PA16 LINE L1 -73 6093 5667 23 0 0 0 chr10 40208779 40208802 -100107963 + AT_rich Low_complexity Low_complexity 1 23 0 5062 190 42 20 chr10 40208811 40208846 -100107919 - L1PA16 LINE L1 -638 5528 5495 228 35 0 0 chr10 40208846 40208875 -100107890 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5062 190 42 20 chr10 40208875 40210255 -100106510 - L1PA16 LINE L1 -671 5495 4089 288 111 0 0 chr10 40210431 40210476 -100106289 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 2405 184 39 19 chr10 40210482 40211015 -100105750 - L1MA6 LINE L1 -6 6294 5751 406 224 0 5 chr10 40211015 40211119 -100105646 - L1M4 LINE L1 -503 6373 6273 * 5177 254 43 36 chr10 40211115 40211464 -100105301 - L1M4 LINE L1 -892 5956 5611 2079 101 0 32 chr10 40211464 40211772 -100104993 + AluY SINE Alu 1 298 -13 5177 254 43 36 chr10 40211772 40212810 -100103955 - L1M4 LINE L1 -1237 5611 4582 2159 96 0 33 chr10 40212810 40213111 -100103654 - AluY SINE Alu -20 291 1 5177 254 43 36 chr10 40213111 40213481 -100103284 - L1M4 LINE L1 -2266 4582 4180 2225 92 0 3 chr10 40213481 40213774 -100102991 - AluY SINE Alu -19 292 1 5177 254 43 36 chr10 40213774 40213990 -100102775 - L1M4 LINE L1 -2668 4180 3967 1586 187 45 15 chr10 40214410 40214742 -100102023 + MER2 DNA MER2_type 2 343 -1 31 68 0 0 chr10 40215470 40215529 -100101236 + AT_rich Low_complexity Low_complexity 1 59 0 250 319 29 58 chr10 40215559 40215697 -100101068 - LTR45 LTR ERV1 0 525 392 9301 215 68 29 chr10 40216039 40217953 -100098812 - L1MA4A LINE L1 -1 7004 5166 2073 133 0 13 chr10 40217953 40218269 -100098496 - AluSx SINE Alu 0 312 1 9301 215 68 29 chr10 40218269 40219763 -100097002 - L1MA4A LINE L1 -1839 5166 3390 2126 119 3 0 chr10 40219763 40220058 -100096707 - AluY SINE Alu -15 296 1 9301 215 68 29 chr10 40220058 40220880 -100095885 - L1MA4A LINE L1 -3615 3390 2602 2706 236 45 7 chr10 40220890 40221799 -100094966 - L1M4 LINE L1 -3226 3622 2677 271 371 45 0 chr10 40222165 40222297 -100094468 - MIR SINE MIR -20 242 105 559 284 65 12 chr10 40223428 40223597 -100093168 + MIR SINE MIR 30 207 -55 186 298 40 89 chr10 40224194 40224387 -100092378 + MIR SINE MIR 17 199 -63 203 316 0 0 chr10 40224496 40224575 -100092190 + (CCTA)n Simple_repeat Simple_repeat 4 82 0 345 340 57 21 chr10 40225618 40225812 -100090953 - MIR SINE MIR -1 261 61 521 227 58 67 chr10 40226015 40226162 -100090603 - MER112 DNA MER1_type -33 227 81 584 203 45 40 chr10 40226162 40226339 -100090426 - MER104 DNA MER2_type 0 180 3 521 227 58 67 chr10 40226339 40226416 -100090349 - MER112 DNA MER1_type -179 81 5 297 247 14 14 chr10 40226943 40227016 -100089749 - L2 LINE L2 0 3313 3241 218 338 0 0 chr10 40227564 40227635 -100089130 - MIR SINE MIR -75 187 117 446 273 23 8 chr10 40227903 40228031 -100088734 + MIR3 SINE MIR 13 142 -66 186 43 0 0 chr10 40228117 40228140 -100088625 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 2052 82 52 28 chr10 40228855 40229146 -100087619 + AluSx SINE Alu 1 298 -14 206 75 0 50 chr10 40229916 40229956 -100086809 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2889 223 47 17 chr10 40230439 40231331 -100085434 - L1M4 LINE L1 -4160 2689 1771 532 186 16 8 chr10 40231332 40231461 -100085304 + L1MA10 LINE L1 6187 6316 -18 1538 273 54 39 chr10 40231468 40231621 -100085144 + MLT1H1 LTR MaLR 12 161 -394 2338 91 0 26 chr10 40231621 40231929 -100084836 + AluY SINE Alu 1 300 -11 1538 273 54 39 chr10 40231929 40232309 -100084456 + MLT1H1 LTR MaLR 161 553 -2 254 244 67 22 chr10 40232311 40232401 -100084364 + MLT1H1-int LTR MaLR 1 94 -1277 2922 307 29 23 chr10 40232511 40233623 -100083142 - L1M4 LINE L1 -5056 1793 676 1222 330 16 2 chr10 40233935 40234384 -100082381 - L1M4 LINE L1 -6385 464 10 775 280 102 34 chr10 40234392 40234870 -100081895 - L1M4 LINE L1 -1834 4312 3802 26 74 0 0 chr10 40235874 40235928 -100080837 + AT_rich Low_complexity Low_complexity 1 54 0 21 36 0 0 chr10 40236147 40236175 -100080590 + AT_rich Low_complexity Low_complexity 1 28 0 1034 183 5 0 chr10 40236257 40236459 -100080306 - L1MC/D LINE L1 -795 5549 5347 189 0 0 0 chr10 40236606 40236627 -100080138 + (GGGA)n Simple_repeat Simple_repeat 4 24 0 820 139 0 0 chr10 40236747 40236869 -100079896 + AluSp/q SINE Alu 169 290 -23 579 171 0 140 chr10 40236881 40236967 -100079798 - MER47A DNA MER2_type -2154 169 115 1906 164 13 0 chr10 40236967 40237265 -100079500 - AluJb SINE Alu -2 310 9 579 171 0 140 chr10 40237265 40237342 -100079423 - MER47A DNA MER2_type -2208 115 29 1181 132 61 14 chr10 40237380 40237593 -100079172 - AluSc SINE Alu -82 227 5 417 232 9 89 chr10 40237597 40237821 -100078944 - L1MC/D LINE L1 -850 5296 5091 1623 176 10 43 chr10 40238612 40238913 -100077852 - AluJo SINE Alu -21 291 1 188 273 80 57 chr10 40239319 40239407 -100077358 + L2 LINE L2 3224 3313 0 312 102 0 0 chr10 40241983 40242032 -100074733 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 1516 176 40 29 chr10 40242057 40242330 -100074435 - AluJb SINE Alu -36 276 1 894 234 46 0 chr10 40242464 40242661 -100074104 + MIR SINE MIR 3 208 -54 189 0 0 0 chr10 40243498 40243519 -100073246 + (GGGA)n Simple_repeat Simple_repeat 4 24 0 535 197 16 33 chr10 40243841 40243963 -100072802 + MER45A DNA AcHobo 54 173 -5 21 0 0 0 chr10 40244917 40244938 -100071827 + AT_rich Low_complexity Low_complexity 1 21 0 215 214 24 0 chr10 40245069 40245111 -100071654 + CT-rich Low_complexity Low_complexity 5 47 0 1997 108 7 44 chr10 40245176 40245503 -100071262 - AluSx SINE Alu 0 316 1 711 224 29 35 chr10 40245898 40246072 -100070693 + MER5B DNA MER1_type 1 173 -5 367 309 22 29 chr10 40246087 40246223 -100070542 - MER5A DNA MER1_type 0 189 55 353 386 39 30 chr10 40246506 40246869 -100069896 - L2 LINE L2 -1907 1407 1042 2843 138 9 0 chr10 40247241 40247684 -100069081 - L1PA16 LINE L1 -9 6157 5711 47 44 0 0 chr10 40248258 40248326 -100068439 + AT_rich Low_complexity Low_complexity 1 68 0 2146 91 3 56 chr10 40248354 40248673 -100068092 + AluSq SINE Alu 9 310 -3 206 333 123 18 chr10 40248916 40249030 -100067735 + L2 LINE L2 3142 3267 -5 500 107 39 10 chr10 40250448 40250551 -100066214 + CT-rich Low_complexity Low_complexity 3 108 0 1095 93 0 27 chr10 40250551 40250734 -100066031 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 217 313 102 39 chr10 40250936 40251064 -100065701 - L2 LINE L2 -18 3295 3160 2055 117 10 10 chr10 40252905 40253204 -100063561 - AluSg SINE Alu -11 299 1 566 259 12 57 chr10 40253511 40253758 -100063007 + MER106A DNA MER1_type 1 236 0 8216 163 102 70 chr10 40254920 40255672 -100061093 + L1MC1 LINE L1 7 733 -5693 10771 64 7 0 chr10 40255672 40257842 -100058923 + L1PA6 LINE L1 3961 6143 -11 8216 163 102 70 chr10 40257842 40257880 -100058885 + L1MC1 LINE L1 733 768 -5658 1525 206 0 24 chr10 40257880 40258167 -100058598 - AluJo SINE Alu -32 280 1 8216 163 102 70 chr10 40258167 40259716 -100057049 + L1MC1 LINE L1 768 2422 -4004 1039 208 34 47 chr10 40259712 40260092 -100056673 + L1MC1 LINE L1 3123 3497 -2929 * 5137 202 51 20 chr10 40260096 40261137 -100055628 + L1MC1 LINE L1 3917 4923 -1690 6576 117 26 18 chr10 40261137 40262199 -100054566 - MER11C LTR ERVK 0 1071 1 5137 202 51 20 chr10 40262199 40263756 -100053009 + L1MC1 LINE L1 4923 6606 -7 1507 194 51 3 chr10 40263759 40264052 -100052713 + AluJo SINE Alu 1 307 -5 198 118 0 0 chr10 40264075 40264109 -100052656 + (CAGG)n Simple_repeat Simple_repeat 3 36 0 290 221 29 0 chr10 40264163 40264231 -100052534 + L1ME LINE L1 5661 5730 -436 181 106 21 43 chr10 40266878 40266925 -100049840 + (TCCC)n Simple_repeat Simple_repeat 4 49 0 236 234 0 0 chr10 40267604 40267668 -100049097 - Charlie1 DNA MER1_type -67 2694 2631 756 279 5 22 chr10 40267681 40267903 -100048862 - Charlie1 DNA MER1_type -2542 219 2 300 333 6 18 chr10 40268096 40268261 -100048504 + CT-rich Low_complexity Low_complexity 1 163 0 2920 162 0 2 chr10 40268595 40269096 -100047669 - L1PA16 LINE L1 -20 6146 5647 327 304 71 48 chr10 40269106 40269669 -100047096 - L1MEc LINE L1 -3161 3054 2479 5428 247 72 35 chr10 40270342 40270866 -100045899 - L1ME1 LINE L1 -5 6161 5658 1108 237 17 4 chr10 40270866 40271102 -100045663 + MER8 DNA MER2_type 1 239 0 5428 247 72 35 chr10 40271102 40273726 -100043039 - L1ME1 LINE L1 -508 5658 2766 561 262 23 70 chr10 40273748 40273965 -100042800 - L1MEc LINE L1 -3716 2499 2330 3113 78 0 0 chr10 40273965 40274374 -100042391 - L1PA8 LINE L1 -2 6170 5762 561 262 23 70 chr10 40274374 40274475 -100042290 - L1MEc LINE L1 -3885 2330 2226 258 295 19 67 chr10 40274480 40274585 -100042180 + MIR SINE MIR 163 262 0 21 36 0 0 chr10 40274835 40274863 -100041902 + AT_rich Low_complexity Low_complexity 1 28 0 2444 71 3 0 chr10 40275368 40275676 -100041089 - AluY SINE Alu -2 309 1 1725 152 3 27 chr10 40276732 40276866 -100039899 + AluJo SINE Alu 12 148 -164 911 95 22 22 chr10 40276866 40277045 -100039720 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 1725 152 3 27 chr10 40277045 40277219 -100039546 + AluJo SINE Alu 148 300 -12 393 157 20 10 chr10 40278824 40278926 -100037839 + (TG)n Simple_repeat Simple_repeat 1 103 0 30 27 0 0 chr10 40280972 40281009 -100035756 + AT_rich Low_complexity Low_complexity 1 37 0 742 217 97 14 chr10 40281778 40281995 -100034770 - MIR SINE MIR -10 252 18 648 248 0 0 chr10 40282641 40282766 -100033999 - FLAM_A SINE Alu -8 125 1 234 243 29 29 chr10 40282852 40282955 -100033810 + A-rich Low_complexity Low_complexity 2 104 0 302 311 132 5 chr10 40283610 40283822 -100032943 + L1MC4a LINE L1 5693 5931 -1877 426 174 0 0 chr10 40284135 40284204 -100032561 - AluJ/FLAM SINE Alu -235 77 9 1533 166 13 67 chr10 40285244 40285557 -100031208 - AluJo SINE Alu -8 304 9 22 35 0 0 chr10 40285854 40285883 -100030882 + AT_rich Low_complexity Low_complexity 1 29 0 1626 166 21 11 chr10 40285883 40286166 -100030599 - AluJo SINE Alu -25 287 2 198 0 0 0 chr10 40287400 40287422 -100029343 + (TA)n Simple_repeat Simple_repeat 2 23 0 684 133 0 50 chr10 40287424 40287544 -100029221 - FLAM_C SINE Alu -24 119 6 453 279 23 58 chr10 40287717 40287889 -100028876 - MIR SINE MIR -56 206 41 237 183 0 100 chr10 40288754 40288814 -100027951 + LTR67 LTR ERVL 439 492 -65 1220 176 107 42 chr10 40288816 40288851 -100027914 - MLT2B1 LTR ERVL -8 512 481 297 0 0 0 chr10 40288851 40288884 -100027881 + (CAA)n Simple_repeat Simple_repeat 3 35 0 1220 176 107 42 chr10 40288884 40289290 -100027475 - MLT2B1 LTR ERVL -39 481 5 816 151 32 0 chr10 40289387 40289513 -100027252 + FLAM_C SINE Alu 1 130 -3 2104 109 0 3 chr10 40289911 40290256 -100026509 - AluY SINE Alu 0 344 1 4787 196 93 65 chr10 40290777 40291406 -100025359 - Charlie1a DNA MER1_type -1308 1453 843 1624 163 10 27 chr10 40291406 40291700 -100025065 + AluJo SINE Alu 1 289 -23 4787 196 93 65 chr10 40291700 40292483 -100024282 - Charlie1a DNA MER1_type -1918 843 1 1725 158 0 0 chr10 40292500 40292747 -100024018 + AluSx SINE Alu 46 292 -20 392 245 126 13 chr10 40292755 40292914 -100023851 - MIR SINE MIR -21 241 65 2548 123 70 29 chr10 40293355 40293770 -100022995 + MSTB1 LTR MaLR 1 432 0 2250 155 11 16 chr10 40294604 40294972 -100021793 + MLT2D LTR ERVL 1 366 -48 360 0 0 0 chr10 40294981 40295021 -100021744 + (TG)n Simple_repeat Simple_repeat 1 40 0 1717 146 58 139 chr10 40295625 40296056 -100020709 + MSTD LTR MaLR 1 396 0 635 241 107 62 chr10 40297331 40297817 -100018948 - L1MC4 LINE L1 -1 8041 7534 981 345 46 52 chr10 40297833 40298520 -100018245 + ERVL LTR ERVL 4407 5089 -675 1116 162 142 111 chr10 40298520 40298872 -100017893 - MLT1A1 LTR MaLR 0 365 3 981 345 46 52 chr10 40298872 40299110 -100017655 + ERVL LTR ERVL 5089 5327 -437 21 0 0 0 chr10 40299185 40299206 -100017559 + AT_rich Low_complexity Low_complexity 1 21 0 723 268 82 18 chr10 40299316 40299667 -100017098 + LTR16C LTR ERVL 79 491 0 365 262 7 0 chr10 40299883 40299974 -100016791 - L1MC/D LINE L1 -560 5610 5534 556 281 31 27 chr10 40299976 40300232 -100016533 - L1MCa LINE L1 -4765 1661 1405 1038 230 22 50 chr10 40300297 40300400 -100016365 - L1MC/D LINE L1 -639 5525 5421 2031 87 40 25 chr10 40300400 40300768 -100015997 - AluY SINE Alu 0 372 1 1038 230 22 50 chr10 40300768 40301159 -100015606 - L1MC/D LINE L1 -743 5421 5049 572 261 46 46 chr10 40301270 40301576 -100015189 - L1MC/D LINE L1 -1388 4758 4453 1551 240 94 27 chr10 40301787 40302156 -100014609 + MLT1C LTR MaLR 1 405 -62 1969 152 0 0 chr10 40302156 40302452 -100014313 - AluY SINE Alu -15 296 1 1551 240 94 27 chr10 40302452 40302520 -100014245 + MLT1C LTR MaLR 405 467 0 822 148 23 0 chr10 40303316 40303444 -100013321 - AluSg/x SINE Alu -22 288 158 1802 163 20 10 chr10 40303984 40304290 -100012475 - AluSx SINE Alu -1 311 3 1642 193 122 21 chr10 40304556 40304702 -100012063 + LOR1b LTR ERV1 1 131 -330 2290 93 0 20 chr10 40304702 40305003 -100011762 + AluSg SINE Alu 1 295 -15 1642 193 122 21 chr10 40305003 40305275 -100011490 + LOR1b LTR ERV1 131 461 0 345 169 133 24 chr10 40305294 40305377 -100011388 + MER63 DNA MER1_type 33 750 -86 280 182 0 0 chr10 40305414 40305458 -100011307 + Alu SINE Alu 2 45 -255 991 139 33 7 chr10 40305458 40305609 -100011156 + AluSg/x SINE Alu 137 291 -21 2254 96 0 7 chr10 40305839 40306130 -100010635 - AluY SINE Alu -22 289 1 1149 137 66 38 chr10 40306131 40306342 -100010423 - AluJo SINE Alu -9 303 87 2160 127 3 0 chr10 40306478 40306769 -100009996 + AluSx SINE Alu 1 292 -20 2186 122 3 0 chr10 40306774 40307078 -100009687 + AluSc SINE Alu 1 305 -4 1853 157 37 3 chr10 40307197 40307497 -100009268 + AluY SINE Alu 1 310 -1 396 290 83 6 chr10 40307541 40307710 -100009055 - MER5A DNA MER1_type -7 182 1 2184 94 21 0 chr10 40307793 40308079 -100008686 + AluSp SINE Alu 4 295 -18 1774 123 0 0 chr10 40308644 40308879 -100007886 - AluSq SINE Alu -78 235 1 2027 116 4 0 chr10 40308883 40309183 -100007582 - AluSp SINE Alu 0 309 9 1514 158 9 94 chr10 40309294 40309441 -100007324 + AluJo SINE Alu 1 159 -153 2430 83 0 3 chr10 40309441 40309743 -100007022 + AluSp SINE Alu 1 301 -12 1514 158 9 94 chr10 40309743 40309822 -100006943 + AluJo SINE Alu 159 193 -119 2373 92 0 0 chr10 40309822 40310125 -100006640 - AluY SINE Alu -8 303 1 1514 158 9 94 chr10 40310125 40310226 -100006539 + AluJo SINE Alu 193 301 -11 310 291 51 0 chr10 40311063 40311142 -100005623 + L2 LINE L2 3231 3313 0 2213 122 0 0 chr10 40311266 40311554 -100005211 - AluSg SINE Alu -22 288 1 2118 144 6 6 chr10 40311852 40312164 -100004601 + AluSx SINE Alu 1 312 0 2239 120 13 3 chr10 40312342 40312650 -100004115 + AluSx SINE Alu 1 311 -1 2258 102 0 23 chr10 40312965 40313270 -100003495 + AluSx SINE Alu 1 298 -14 1976 156 0 0 chr10 40313867 40314155 -100002610 + AluSx SINE Alu 1 288 -24 2054 129 3 3 chr10 40314236 40314539 -100002226 - AluSg SINE Alu -3 307 5 2089 124 3 0 chr10 40314887 40315178 -100001587 + AluSc SINE Alu 1 292 -17 1727 153 3 28 chr10 40315313 40315601 -100001164 - AluJo SINE Alu 0 312 32 1433 195 31 21 chr10 40316008 40316271 -100000494 + AluJo SINE Alu 1 269 -43 2385 89 0 3 chr10 40316271 40316574 -100000191 - AluY SINE Alu -9 302 1 1433 195 31 21 chr10 40316574 40316597 -100000168 + AluJo SINE Alu 269 290 -22 585 281 26 0 chr10 40316606 40316759 -100000006 - MIR SINE MIR 0 262 106 2237 119 0 0 chr10 40317413 40317708 -99999057 - AluSg SINE Alu -13 297 3 1969 129 35 0 chr10 40317711 40317998 -99998767 - AluSx SINE Alu -15 297 1 784 151 7 36 chr10 40318005 40318144 -99998621 - AluJb SINE Alu -176 136 2 211 209 202 78 chr10 40318289 40318418 -99998347 - MIR SINE MIR -116 146 2 2139 109 0 0 chr10 40318865 40319140 -99997625 + AluSg SINE Alu 1 275 -35 2130 131 0 0 chr10 40319703 40319994 -99996771 - AluSc SINE Alu -18 291 1 2027 117 31 0 chr10 40320221 40320512 -99996253 + AluSx SINE Alu 1 300 -12 576 106 0 0 chr10 40320512 40320597 -99996168 + (GGGGA)n Simple_repeat Simple_repeat 1 85 0 194 265 0 0 chr10 40320755 40320804 -99995961 - L2 LINE L2 -3 3269 3221 2366 113 0 0 chr10 40321284 40321593 -99995172 + AluSc SINE Alu 1 309 0 212 133 0 44 chr10 40321779 40321824 -99994941 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 1881 103 77 0 chr10 40322029 40322301 -99994464 + AluSc SINE Alu 1 293 -16 1526 180 36 11 chr10 40322310 40322660 -99994105 + AluSq SINE Alu 1 357 0 322 321 58 70 chr10 40322711 40322950 -99993815 + L1ME4a LINE L1 4747 4982 -1164 2297 89 0 3 chr10 40322950 40323241 -99993524 + AluY SINE Alu 1 290 -21 322 321 58 70 chr10 40323241 40323328 -99993437 + L1ME4a LINE L1 4982 5069 -1077 387 0 0 0 chr10 40323351 40323394 -99993371 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 1773 156 11 0 chr10 40323394 40323670 -99993095 - AluSx SINE Alu -32 280 2 1540 181 53 0 chr10 40323847 40324129 -99992636 + AluJo SINE Alu 1 297 -15 2461 81 7 0 chr10 40324188 40324497 -99992268 + AluY SINE Alu 1 311 0 1096 258 128 42 chr10 40324503 40324981 -99991784 + L1ME4a LINE L1 5315 5878 -243 1413 202 49 91 chr10 40324981 40325205 -99991560 + MSTB1 LTR MaLR 1 198 -234 1480 186 28 17 chr10 40325205 40325496 -99991269 + AluJo SINE Alu 1 294 -18 1413 202 49 91 chr10 40325496 40325721 -99991044 + MSTB1 LTR MaLR 198 431 -1 1096 258 128 42 chr10 40325721 40325887 -99990878 + L1ME4a LINE L1 5878 6028 -93 280 42 0 42 chr10 40325921 40325969 -99990796 + (TCCCC)n Simple_repeat Simple_repeat 1 46 0 820 242 0 0 chr10 40325969 40326134 -99990631 - FRAM SINE Alu -15 161 1 1794 154 6 49 chr10 40326621 40326946 -99989819 + AluSx SINE Alu 1 311 -1 467 258 92 6 chr10 40327167 40327330 -99989435 + MER69A DNA AcHobo 1 177 0 454 219 47 120 chr10 40327407 40327496 -99989269 - Charlie8 DNA MER1_type -163 178 109 2251 128 0 0 chr10 40327496 40327793 -99988972 + AluSx SINE Alu 1 297 -15 454 219 47 120 chr10 40327793 40327895 -99988870 - Charlie8 DNA MER1_type -232 109 1 1966 139 0 20 chr10 40328772 40329074 -99987691 - AluSg SINE Alu -14 296 1 1707 153 33 4 chr10 40329303 40329620 -99987145 - AluSq SINE Alu 0 325 1 1753 197 3 0 chr10 40329652 40329957 -99986808 + AluJo SINE Alu 1 306 -6 259 306 72 18 chr10 40330112 40330223 -99986542 - L2 LINE L2 0 3272 3156 1835 137 6 35 chr10 40330250 40330563 -99986202 + AluSx SINE Alu 1 304 -8 180 0 0 0 chr10 40330627 40330647 -99986118 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1643 123 0 0 chr10 40330670 40330898 -99985867 - AluSc SINE Alu -81 228 1 543 250 112 40 chr10 40330905 40331283 -99985482 - L1MEd LINE L1 -4862 1257 786 2175 142 0 0 chr10 40331473 40331784 -99984981 - AluSx SINE Alu -1 311 1 229 325 75 0 chr10 40331874 40331994 -99984771 - L1MEd LINE L1 -5482 637 509 195 304 156 44 chr10 40332385 40332520 -99984245 + MIR SINE MIR 39 188 -74 218 246 103 119 chr10 40332558 40332616 -99984149 + L2 LINE L2 3167 3224 -89 2076 130 10 0 chr10 40332616 40332909 -99983856 + AluSg SINE Alu 1 296 -14 218 246 103 119 chr10 40332909 40332976 -99983789 + L2 LINE L2 3224 3290 -23 1608 177 18 21 chr10 40333044 40333327 -99983438 + AluJo SINE Alu 1 282 -30 2254 112 0 3 chr10 40333609 40333903 -99982862 - AluSx SINE Alu -19 293 1 225 128 0 0 chr10 40333981 40334020 -99982745 - L1ME LINE L1 -415 5755 5717 1892 163 10 3 chr10 40334540 40334841 -99981924 - AluJb SINE Alu -9 303 1 1366 160 3 134 chr10 40335052 40335140 -99981625 - MER47A DNA MER2_type -1958 365 267 2017 137 3 3 chr10 40335140 40335425 -99981340 - AluSx SINE Alu -27 285 1 1366 160 3 134 chr10 40335425 40335564 -99981201 - MER47A DNA MER2_type -2056 267 111 1978 108 0 7 chr10 40335564 40335833 -99980932 + AluSq SINE Alu 38 304 -9 1366 160 3 134 chr10 40335833 40335914 -99980851 - MER47A DNA MER2_type -2212 111 113 1906 164 13 0 chr10 40335914 40336212 -99980553 - AluJb SINE Alu -2 310 9 1366 160 3 134 chr10 40336212 40336289 -99980476 - MER47A DNA MER2_type -2209 114 29 2286 110 10 0 chr10 40336291 40336600 -99980165 + AluSq SINE Alu 1 312 -1 371 220 0 60 chr10 40336641 40336741 -99980024 - MIR SINE MIR -104 158 65 2048 129 14 7 chr10 40336947 40337242 -99979523 - AluSx SINE Alu -15 297 1 1383 138 0 0 chr10 40338627 40338830 -99977935 - AluSq SINE Alu -47 266 64 484 197 0 116 chr10 40338830 40338977 -99977788 - MLT2B1 LTR ERVL -261 259 130 214 215 143 71 chr10 40339047 40339170 -99977595 + MIR SINE MIR 12 141 -67 2280 119 13 26 chr10 40339180 40339429 -99977336 + L1PA15 LINE L1 5658 5902 -263 2065 131 7 10 chr10 40339429 40339726 -99977039 + AluSx SINE Alu 1 296 -16 2280 119 13 26 chr10 40339726 40339864 -99976901 + L1PA15 LINE L1 5902 6040 -125 857 152 0 51 chr10 40339866 40340004 -99976761 + AluSq/x SINE Alu 6 136 -176 2138 127 0 0 chr10 40340004 40340287 -99976478 + AluSg SINE Alu 1 283 -27 755 169 0 7 chr10 40340307 40340449 -99976316 + L1PA15 LINE L1 6025 6165 0 2142 111 3 20 chr10 40340637 40340935 -99975830 - AluSx SINE Alu -19 293 1 5551 135 30 42 chr10 40341851 40342832 -99973933 + LTR5 LTR ERVK 1 969 0 21 0 0 0 chr10 40343090 40343111 -99973654 + AT_rich Low_complexity Low_complexity 1 21 0 2148 107 3 13 chr10 40343168 40343468 -99973297 - AluSx SINE Alu -15 297 1 2022 109 4 11 chr10 40343616 40343891 -99972874 + AluSg SINE Alu 1 273 -37 6312 172 11 11 chr10 40343897 40345216 -99971549 + MSTA-int LTR MaLR 296 1571 -9 1854 153 128 36 chr10 40345225 40345617 -99971148 + MSTA LTR MaLR 1 428 0 228 319 191 47 chr10 40345900 40346523 -99970242 - L2 LINE L2 -665 2649 1937 21 0 0 0 chr10 40347064 40347085 -99969680 + AT_rich Low_complexity Low_complexity 1 21 0 486 49 0 0 chr10 40347184 40347245 -99969520 + (TA)n Simple_repeat Simple_repeat 1 61 0 530 230 123 8 chr10 40347364 40347625 -99969140 + MER33 DNA MER1_type 17 307 -17 2316 67 0 0 chr10 40348489 40348771 -99967994 - AluY SINE Alu -13 298 17 24 53 0 0 chr10 40348792 40348830 -99967935 + AT_rich Low_complexity Low_complexity 1 38 0 2084 98 7 0 chr10 40350310 40350616 -99966149 + AluSc SINE Alu 1 308 0 239 295 0 0 chr10 40350902 40350980 -99965785 + (CATATA)n Simple_repeat Simple_repeat 6 83 0 327 383 39 0 chr10 40351061 40351241 -99965524 - HAL1 LINE L1 -104 2403 2217 26 0 0 0 chr10 40351260 40351286 -99965479 + AT_rich Low_complexity Low_complexity 1 26 0 285 119 15 30 chr10 40351314 40351381 -99965384 + (TA)n Simple_repeat Simple_repeat 1 66 0 282 297 31 40 chr10 40351671 40351893 -99964872 - HAL1 LINE L1 -722 1785 1566 1226 271 88 16 chr10 40351947 40352378 -99964387 + LTR40b LTR ERVL 1 462 0 2142 119 3 0 chr10 40352860 40353153 -99963612 - AluSx SINE Alu -14 298 5 761 161 0 8 chr10 40353168 40353292 -99963473 - AluSg/x SINE Alu -18 294 172 2076 132 3 0 chr10 40353399 40353694 -99963071 - AluSg SINE Alu -14 296 1 2090 102 10 3 chr10 40353784 40354077 -99962688 - AluY SINE Alu -16 295 1 274 196 0 18 chr10 40354282 40354338 -99962427 - MIR SINE MIR -38 224 170 1846 174 3 3 chr10 40354368 40354666 -99962099 + AluJb SINE Alu 10 307 -5 23 0 0 0 chr10 40355452 40355475 -99961290 + AT_rich Low_complexity Low_complexity 1 23 0 203 0 37 0 chr10 40355542 40355569 -99961196 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2267 70 0 11 chr10 40355571 40355857 -99960908 - AluY SINE Alu -28 283 1 541 260 103 5 chr10 40356063 40356267 -99960498 + Charlie1 DNA MER1_type 16 239 -2522 238 77 39 58 chr10 40356317 40356369 -99960396 - Charlie1 DNA MER1_type -16 2745 2695 218 163 47 0 chr10 40356406 40356449 -99960316 + (TAGA)n Simple_repeat Simple_repeat 1 45 0 188 216 0 0 chr10 40356998 40357035 -99959730 - MIR SINE MIR -115 147 111 21 0 0 0 chr10 40358735 40358756 -99958009 + AT_rich Low_complexity Low_complexity 1 21 0 2046 148 22 27 chr10 40358873 40359239 -99957526 + THE1B LTR MaLR 1 364 0 10928 117 11 2 chr10 40359239 40360804 -99955961 + THE1B-int LTR MaLR 1 1580 0 1987 135 21 81 chr10 40360806 40361191 -99955574 + THE1B LTR MaLR 3 364 0 22 0 0 0 chr10 40361275 40361297 -99955468 + AT_rich Low_complexity Low_complexity 1 22 0 193 289 44 0 chr10 40361703 40361748 -99955017 + MER5A DNA MER1_type 103 149 -40 1024 342 47 23 chr10 40361841 40362396 -99954369 + L2 LINE L2 2260 2827 -487 2256 93 30 0 chr10 40362460 40362760 -99954005 - AluY SINE Alu -2 309 1 1338 217 24 73 chr10 40363086 40363496 -99953269 + MLT1B LTR MaLR 1 390 0 22 0 0 0 chr10 40363936 40363958 -99952807 + AT_rich Low_complexity Low_complexity 1 22 0 2170 94 14 3 chr10 40364254 40364541 -99952224 + AluY SINE Alu 1 290 -21 23 54 0 0 chr10 40364707 40364744 -99952021 + AT_rich Low_complexity Low_complexity 1 37 0 204 40 0 0 chr10 40365184 40365209 -99951556 + (TCTA)n Simple_repeat Simple_repeat 2 26 0 270 269 0 56 chr10 40365749 40365857 -99950908 + GA-rich Low_complexity Low_complexity 5 106 0 561 280 113 6 chr10 40365886 40366054 -99950711 - MIR SINE MIR -37 225 40 1448 194 17 31 chr10 40366229 40366518 -99950247 + AluJo SINE Alu 1 285 -27 354 330 86 30 chr10 40366609 40366876 -99949889 - HAL1 LINE L1 -961 1546 1265 365 318 88 40 chr10 40366966 40367240 -99949525 + L2 LINE L2 3026 3312 -1 941 205 0 133 chr10 40368606 40368952 -99947813 - MLT1B LTR MaLR 0 390 91 237 227 0 0 chr10 40368992 40369058 -99947707 + (TA)n Simple_repeat Simple_repeat 1 66 0 310 249 110 69 chr10 40369388 40369561 -99947204 - L1MC5 LINE L1 -24 7937 7758 31 26 0 0 chr10 40369595 40369633 -99947132 + AT_rich Low_complexity Low_complexity 1 38 0 762 183 23 0 chr10 40369750 40369881 -99946884 + FRAM SINE Alu 26 159 -17 2217 96 0 0 chr10 40369883 40370186 -99946579 + AluSg SINE Alu 1 303 0 1400 197 37 43 chr10 40370189 40370527 -99946238 + AluJb SINE Alu 1 336 0 25 0 0 0 chr10 40370998 40371023 -99945742 + AT_rich Low_complexity Low_complexity 1 25 0 228 24 122 0 chr10 40372737 40372778 -99943987 + L1HS LINE L1 6110 6155 0 1117 150 26 0 chr10 40373448 40373641 -99943124 - Tigger3(Golem) DNA MER2_type -1 3028 2831 1440 166 7 90 chr10 40373646 40373999 -99942766 + AluJo SINE Alu 6 333 0 3099 113 36 11 chr10 40373999 40374548 -99942217 - Tigger3(Golem) DNA MER2_type -189 2840 2278 372 188 208 0 chr10 40374525 40374626 -99942139 - Tigger3(Golem) DNA MER2_type -2907 122 1 * 288 224 60 0 chr10 40377289 40377356 -99939409 + Charlie2 DNA MER1_type 255 325 -2457 1208 208 72 12 chr10 40377359 40377705 -99939060 + Charlie2 DNA MER1_type 1857 2223 -639 848 204 218 14 chr10 40378101 40378600 -99938165 + Charlie2 DNA MER1_type 2262 2862 0 2357 172 35 16 chr10 40379375 40379799 -99936966 - MSTB1 LTR MaLR 0 432 1 2714 103 3 3 chr10 40379822 40380191 -99936574 + L1PA8 LINE L1 5801 6169 -3 430 238 197 0 chr10 40380254 40380401 -99936364 - MIR SINE MIR 0 262 87 1413 211 96 38 chr10 40380411 40380828 -99935937 - MER39 LTR ERV1 0 707 267 241 276 92 0 chr10 40380908 40380984 -99935781 - MIR SINE MIR -179 83 1 199 313 78 0 chr10 40383268 40383332 -99933433 - L2 LINE L2 -51 3221 3153 934 192 59 0 chr10 40383333 40383536 -99933229 + MER33 DNA MER1_type 1 215 -109 1714 169 11 0 chr10 40383536 40383838 -99932927 - AluJb SINE Alu 0 305 1 199 311 85 47 chr10 40383864 40383970 -99932795 + MIR SINE MIR 104 213 -49 1194 101 6 12 chr10 40384890 40384913 -99931852 - MER107 DNA MER1_type -29 168 146 182 36 0 36 chr10 40384913 40384941 -99931824 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1194 101 6 12 chr10 40384941 40385086 -99931679 - MER107 DNA MER1_type -51 146 1 221 0 35 0 chr10 40386131 40386160 -99930605 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 44006 46 6 1 chr10 40386508 40392630 -99924135 + L1PA4 LINE L1 1 6155 0 964 174 0 0 chr10 40394015 40394197 -99922568 - FRAM SINE Alu 0 179 1 526 216 122 34 chr10 40395001 40395246 -99921519 + MER34 LTR ERV1 229 542 0 332 339 60 55 chr10 40395341 40395487 -99921278 - MIR3 SINE MIR -22 186 37 1903 162 3 0 chr10 40395487 40395784 -99920981 - AluSx SINE Alu -14 298 1 332 339 60 55 chr10 40395784 40395820 -99920945 - MIR3 SINE MIR -171 37 3 1381 161 8 24 chr10 40395847 40396101 -99920664 + AluJo SINE Alu 42 291 -21 30 0 0 0 chr10 40396102 40396132 -99920633 + AT_rich Low_complexity Low_complexity 1 30 0 263 220 154 44 chr10 40396163 40396254 -99920511 - MER91B DNA MER1_type -89 101 1 1676 187 0 0 chr10 40396729 40397018 -99919747 - AluJo SINE Alu -20 292 4 2136 158 40 15 chr10 40398258 40398586 -99918179 - MER1B DNA MER1_type -1 336 1 4237 105 2 2 chr10 40398748 40399302 -99917463 + MER41A LTR ERV1 1 554 0 202 261 166 38 chr10 40399647 40399858 -99916907 - L2 LINE L2 -419 2895 2658 256 220 0 34 chr10 40400127 40400186 -99916579 + MER5A DNA MER1_type 1 57 -132 1543 192 7 13 chr10 40400244 40400546 -99916219 - AluJo SINE Alu -9 303 4 1334 101 6 6 chr10 40400563 40400741 -99916024 + AluSp SINE Alu 1 178 -135 1862 171 0 10 chr10 40400929 40401228 -99915537 + AluJb SINE Alu 1 296 -16 280 61 0 41 chr10 40401381 40401430 -99915335 + (CAT)n Simple_repeat Simple_repeat 1 47 0 189 0 0 0 chr10 40402149 40402170 -99914595 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 295 196 19 0 chr10 40403112 40403174 -99913591 - FLAM SINE Alu -16 117 71 630 149 0 0 chr10 40403182 40403276 -99913489 + AluJ/FRAM SINE Alu 216 309 -3 840 158 23 0 chr10 40403930 40404063 -99912702 + AluJo SINE Alu 1 136 -176 1569 200 7 4 chr10 40405045 40405325 -99911440 - AluJo SINE Alu -31 281 1 708 199 0 30 chr10 40405873 40406004 -99910761 - FLAM_A SINE Alu -9 133 7 276 322 43 48 chr10 40406199 40406429 -99910336 - L2 LINE L2 -450 2864 2636 2122 114 0 7 chr10 40406490 40406779 -99909986 + AluY SINE Alu 6 292 -19 1045 166 0 18 chr10 40406787 40406950 -99909815 + AluJb SINE Alu 135 294 -18 243 257 0 0 chr10 40407362 40407436 -99909329 + (TATATG)n Simple_repeat Simple_repeat 2 75 0 28 29 0 0 chr10 40407467 40407502 -99909263 + AT_rich Low_complexity Low_complexity 1 35 0 664 236 0 0 chr10 40407550 40407677 -99909088 - FLAM_A SINE Alu -6 127 1 437 240 5 88 chr10 40407761 40407840 -99908925 - L1ME LINE L1 -359 5762 5678 2155 151 10 68 chr10 40407840 40408252 -99908513 - MLT1B LTR MaLR -2 388 1 437 240 5 88 chr10 40408252 40408376 -99908389 - L1ME LINE L1 -443 5678 5576 2698 89 43 3 chr10 40408405 40408755 -99908010 - THE1B LTR MaLR 0 364 1 330 256 58 73 chr10 40408798 40408989 -99907776 - MLT1J LTR MaLR -10 501 314 791 231 187 11 chr10 40409000 40409268 -99907497 + L2 LINE L2 2932 3246 -67 354 304 0 0 chr10 40409271 40409363 -99907402 + (CA)n Simple_repeat Simple_repeat 1 92 0 379 224 19 25 chr10 40409414 40409575 -99907190 + CT-rich Low_complexity Low_complexity 4 163 0 307 274 83 0 chr10 40409582 40409666 -99907099 - MIR SINE MIR -99 109 19 810 142 8 8 chr10 40410074 40410201 -99906564 - AluJb SINE Alu -185 127 1 987 298 119 11 chr10 40410461 40410898 -99905867 + L2 LINE L2 2804 3287 -26 601 153 41 20 chr10 40410900 40410998 -99905767 - AluJo SINE Alu -25 287 188 * 812 138 17 0 chr10 40410996 40411112 -99905653 - AluJo SINE Alu -192 120 3 24 32 0 0 chr10 40411116 40411147 -99905618 + AT_rich Low_complexity Low_complexity 1 31 0 273 231 204 9 chr10 40411207 40411315 -99905450 + MER117 DNA MER1_type 4 132 -65 888 155 0 14 chr10 40411733 40411875 -99904890 - AluJb SINE Alu -16 296 157 2039 120 0 17 chr10 40413128 40413459 -99903306 + AluSc SINE Alu 1 309 0 1819 176 0 19 chr10 40413809 40414116 -99902649 + AluJo SINE Alu 1 301 -11 273 196 0 0 chr10 40414285 40414341 -99902424 + (TA)n Simple_repeat Simple_repeat 2 57 0 214 172 35 0 chr10 40414390 40414432 -99902333 + (TA)n Simple_repeat Simple_repeat 1 47 -13 5361 146 75 44 chr10 40414432 40415469 -99901296 + MER11C LTR ERVK 3 1071 0 214 172 35 0 chr10 40415469 40415484 -99901281 + (TA)n Simple_repeat Simple_repeat 47 60 0 361 113 0 0 chr10 40415620 40415682 -99901083 - L1MA7 LINE L1 -1 6290 6229 5831 261 45 28 chr10 40415682 40418189 -99898576 - L1 LINE L1 -2498 3536 1334 1226 238 74 15 chr10 40418189 40418513 -99898252 - MER2 DNA MER2_type 0 344 2 5831 261 45 28 chr10 40418513 40419565 -99897200 - L1 LINE L1 -4700 1334 302 247 307 147 43 chr10 40419676 40420002 -99896763 - L1M3a LINE L1 -5251 704 345 1172 334 7 10 chr10 40420043 40420456 -99896309 - L1M3a LINE L1 -5532 423 12 22 56 0 0 chr10 40420482 40420518 -99896247 + AT_rich Low_complexity Low_complexity 1 36 0 2111 191 30 7 chr10 40421896 40422331 -99894434 - L1MA6 LINE L1 0 6300 5856 2574 223 77 47 chr10 40422410 40423074 -99893691 + MLT1A1-int LTR MaLR 1052 1735 0 1301 231 126 3 chr10 40423074 40423399 -99893366 + MLT1A1 LTR MaLR 1 365 0 2381 78 0 7 chr10 40423928 40424236 -99892529 + AluY SINE Alu 1 306 -5 24 0 0 0 chr10 40424528 40424552 -99892213 + AT_rich Low_complexity Low_complexity 1 24 0 1456 251 35 43 chr10 40425603 40426096 -99890669 + L1ME1 LINE L1 5676 6164 -2 403 272 82 13 chr10 40426621 40426779 -99889986 - MIR SINE MIR -63 199 31 2275 84 13 10 chr10 40426855 40427154 -99889611 + AluY SINE Alu 1 300 -11 226 53 79 26 chr10 40428020 40428096 -99888669 + (TA)n Simple_repeat Simple_repeat 1 80 0 2268 88 0 41 chr10 40428143 40428461 -99888304 + AluY SINE Alu 1 305 -6 1731 102 50 79 chr10 40428951 40429254 -99887511 + AluSq SINE Alu 1 294 -19 35 0 0 0 chr10 40429265 40429300 -99887465 + AT_rich Low_complexity Low_complexity 1 35 0 403 296 96 0 chr10 40430031 40430166 -99886599 - MIR SINE MIR -66 196 49 224 208 21 0 chr10 40430535 40430583 -99886182 + L2 LINE L2 3223 3271 -1 22 0 0 0 chr10 40431060 40431082 -99885683 + AT_rich Low_complexity Low_complexity 1 22 0 462 227 127 0 chr10 40432064 40432174 -99884591 + FLAM_A SINE Alu 1 124 -9 229 368 59 34 chr10 40432189 40432235 -99884530 - L2 LINE L2 -584 2730 2687 2455 71 0 3 chr10 40432235 40432531 -99884234 + AluY SINE Alu 1 295 -16 229 368 59 34 chr10 40432531 40432688 -99884077 - L2 LINE L2 -627 2687 2522 3690 204 28 22 chr10 40432694 40433506 -99883259 + L1MB8 LINE L1 4966 5793 -385 2268 107 7 0 chr10 40433506 40433805 -99882960 - AluSq SINE Alu -12 301 1 3690 204 28 22 chr10 40433805 40434189 -99882576 + L1MB8 LINE L1 5793 6173 -5 200 254 254 36 chr10 40434404 40434569 -99882196 - L2 LINE L2 -1038 2276 2076 1875 132 10 52 chr10 40434793 40434936 -99881829 + AluSq SINE Alu 1 148 -165 2187 78 46 4 chr10 40434936 40435217 -99881548 + AluSc SINE Alu 1 293 -16 1875 132 10 52 chr10 40435217 40435383 -99881382 + AluSq SINE Alu 148 297 -16 1633 176 10 3 chr10 40436554 40436843 -99879922 - AluJo SINE Alu -21 291 1 2116 141 0 3 chr10 40437388 40437694 -99879071 + AluSq SINE Alu 1 305 -8 25 31 0 0 chr10 40437950 40437982 -99878783 + AT_rich Low_complexity Low_complexity 1 32 0 425 93 0 0 chr10 40438693 40438747 -99878018 + Alu SINE Alu 229 282 -27 2167 123 7 0 chr10 40439100 40439417 -99877348 - AluSx SINE Alu 0 312 1 25 0 0 0 chr10 40440309 40440334 -99876431 + AT_rich Low_complexity Low_complexity 1 25 0 927 273 95 48 chr10 40440471 40440987 -99875778 + MLT1F LTR MaLR 1 540 -2 21 36 0 0 chr10 40441252 40441280 -99875485 + AT_rich Low_complexity Low_complexity 1 28 0 308 235 12 71 chr10 40441581 40441666 -99875099 + Tigger3(Golem) DNA MER2_type 2 81 -2948 298 109 0 0 chr10 40441678 40441724 -99875041 - AluSx SINE Alu -2 298 253 1268 108 48 0 chr10 40441724 40441891 -99874874 - AluSx SINE Alu -137 175 1 1604 126 45 4 chr10 40441895 40442164 -99874601 + Tigger3(Golem) DNA MER2_type 2749 3028 -1 306 0 0 0 chr10 40443077 40443111 -99873654 + (TG)n Simple_repeat Simple_repeat 2 35 0 387 216 0 11 chr10 40443299 40443387 -99873378 - L1MCa LINE L1 -5762 664 578 2494 250 11 3 chr10 40443473 40444041 -99872724 - L1MCa LINE L1 -5816 610 39 1891 202 0 48 chr10 40444168 40444584 -99872181 + MSTD LTR MaLR 1 396 0 882 355 28 0 chr10 40444655 40445120 -99871645 - HERV16 LTR ERVL -3604 1392 915 320 362 122 24 chr10 40445256 40445795 -99870970 - HERV16 LTR ERVL -4337 659 68 400 324 96 42 chr10 40445874 40446279 -99870486 + LTR16A1 LTR ERVL 1 427 -30 270 337 126 26 chr10 40446286 40446675 -99870090 - LTR16A1 LTR ERVL -29 428 1 1512 211 62 130 chr10 40446801 40447668 -99869097 - L1PA15-16 LINE L1 -2895 3954 3147 6105 124 6 6 chr10 40447691 40448702 -99868063 - L1MA2 LINE L1 0 6304 5294 1022 196 10 0 chr10 40448700 40448904 -99867861 - L1MA2 LINE L1 -1977 4169 3964 * 1631 196 5 0 chr10 40448907 40449295 -99867470 - L1PA15-16 LINE L1 -3703 3146 2757 356 202 67 19 chr10 40451513 40451617 -99865148 - L1PA15-16 LINE L1 -4070 2779 2671 2796 127 42 8 chr10 40451620 40452100 -99864665 + L1PA15 LINE L1 5669 6164 -1 1918 134 36 55 chr10 40452225 40452590 -99864175 + MLT2D LTR ERVL 1 358 -56 201 74 0 0 chr10 40452607 40452634 -99864131 + (TAGG)n Simple_repeat Simple_repeat 1 27 0 198 118 0 0 chr10 40452635 40452669 -99864096 + (CA)n Simple_repeat Simple_repeat 2 35 0 219 267 0 0 chr10 40452670 40452715 -99864050 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 313 48 0 0 chr10 40452897 40452939 -99863826 - U3 snRNA snRNA -175 42 1 637 279 44 3 chr10 40453096 40453394 -99863371 + L1ME3A LINE L1 2268 2577 -3569 814 319 68 19 chr10 40453409 40453980 -99862785 + L1ME3A LINE L1 5523 6121 -49 17033 34 1 0 chr10 40454212 40457047 -99859718 + L1PA3 LINE L1 3317 6152 -3 192 77 0 0 chr10 40457292 40457318 -99859447 + (A)n Simple_repeat Simple_repeat 1 26 0 244 234 36 18 chr10 40457318 40457429 -99859336 + MER20B DNA MER1_type 663 775 -8 278 247 11 0 chr10 40457648 40457741 -99859024 + (GAATG)n Simple_repeat Simple_repeat 2 95 0 962 190 61 4 chr10 40458045 40458349 -99858416 + MLT1A1 LTR MaLR 8 365 0 22 0 0 0 chr10 40458972 40458994 -99857771 + AT_rich Low_complexity Low_complexity 1 22 0 1878 248 113 20 chr10 40459722 40459970 -99856795 - L1ME2 LINE L1 -10 6088 5865 2351 88 3 3 chr10 40459970 40460267 -99856498 - AluSx SINE Alu -7 305 9 1878 248 113 20 chr10 40460267 40460955 -99855810 - L1ME2 LINE L1 -233 5865 5066 351 0 0 0 chr10 40461379 40461418 -99855347 + (TG)n Simple_repeat Simple_repeat 2 40 0 2063 258 55 46 chr10 40461418 40462295 -99854470 - L1ME2 LINE L1 -3234 2846 1978 360 0 0 0 chr10 40462295 40462335 -99854430 + (TG)n Simple_repeat Simple_repeat 2 41 0 2063 258 55 46 chr10 40462335 40462594 -99854171 - L1ME2 LINE L1 -4102 1978 1723 2081 128 13 3 chr10 40462594 40462892 -99853873 - AluSg1 SINE Alu -8 301 1 2063 258 55 46 chr10 40462892 40463316 -99853449 - L1ME2 LINE L1 -4357 1723 1304 1780 179 10 0 chr10 40463316 40463442 -99853323 + AluSx SINE Alu 1 124 -188 270 116 0 0 chr10 40463442 40463485 -99853280 + (CA)n Simple_repeat Simple_repeat 2 44 0 1780 179 10 0 chr10 40463485 40463648 -99853117 + AluSx SINE Alu 124 293 -19 2063 258 55 46 chr10 40463648 40464193 -99852572 - L1ME2 LINE L1 -4776 1304 700 296 370 62 9 chr10 40464814 40465038 -99851727 - MIR SINE MIR -20 242 7 800 260 42 75 chr10 40466113 40466627 -99850138 - MLT1H LTR MaLR 0 549 11 1612 173 14 24 chr10 40466685 40466980 -99849785 - AluJo SINE Alu -20 292 1 2499 82 0 0 chr10 40467127 40467432 -99849333 - AluY SINE Alu -2 309 5 236 211 0 58 chr10 40467540 40467592 -99849173 - L2 LINE L2 -2 3270 3222 193 316 0 0 chr10 40468051 40468108 -99848657 - MER5B DNA MER1_type -105 73 17 324 365 74 34 chr10 40468130 40468684 -99848081 - L2 LINE L2 -552 2762 2187 287 378 16 8 chr10 40468708 40468835 -99847930 - MER5A DNA MER1_type -3 186 59 1659 209 35 8 chr10 40468956 40469330 -99847435 + MLT1B LTR MaLR 1 384 -6 273 280 21 27 chr10 40469748 40469858 -99846907 + GA-rich Low_complexity Low_complexity 1 109 0 226 216 0 0 chr10 40472407 40472458 -99844307 - L1M4 LINE L1 -3311 2835 2785 1747 45 0 0 chr10 40472480 40472681 -99844084 - AluY SINE Alu -15 296 96 648 49 0 0 chr10 40473437 40473519 -99843246 + AluY SINE Alu 1 82 -229 2226 124 0 3 chr10 40473962 40474268 -99842497 + AluSq SINE Alu 5 309 -4 42 41 0 52 chr10 40474688 40474785 -99841980 + AT_rich Low_complexity Low_complexity 1 92 0 21 36 0 0 chr10 40474949 40474977 -99841788 + AT_rich Low_complexity Low_complexity 1 28 0 549 143 0 0 chr10 40475307 40475384 -99841381 - AluJ/FLAM SINE Alu -230 82 6 674 268 57 24 chr10 40475526 40475772 -99840993 + L2 LINE L2 3050 3303 -10 5373 86 18 0 chr10 40475772 40476532 -99840233 + L1PA11 LINE L1 5400 6173 -1 22 0 0 0 chr10 40476583 40476605 -99840160 + AT_rich Low_complexity Low_complexity 1 22 0 24744 40 3 3 chr10 40476646 40480488 -99836277 - L1PA4 LINE L1 0 6155 2310 709 264 11 22 chr10 40480668 40480846 -99835919 - MER45A DNA AcHobo -2 176 1 295 257 140 7 chr10 40480893 40481029 -99835736 + L2 LINE L2 3114 3267 -5 2214 114 0 0 chr10 40482236 40482517 -99834248 - AluSx SINE Alu -15 297 17 1836 203 36 31 chr10 40482824 40483273 -99833492 + pTR5 LTR ERV1 743 1193 -1245 306 368 59 18 chr10 40484145 40484417 -99832348 + HAL1 LINE L1 1105 1387 -1120 1848 153 29 132 chr10 40484661 40485145 -99831620 - Tigger2a DNA MER2_type 0 434 1 2804 188 28 33 chr10 40485513 40486118 -99830647 - LTR26 LTR ERV1 0 603 2 249 108 0 0 chr10 40486160 40486197 -99830568 + (TG)n Simple_repeat Simple_repeat 2 38 0 344 291 136 20 chr10 40486528 40486593 -99830172 + L1M4 LINE L1 2679 2735 -3411 2579 50 3 3 chr10 40486593 40486891 -99829874 + AluY SINE Alu 1 298 -13 344 291 136 20 chr10 40486891 40487127 -99829638 + L1M4 LINE L1 2735 3015 -3131 668 168 8 0 chr10 40488299 40488424 -99828341 + L1MA7 LINE L1 6166 6291 0 418 291 81 45 chr10 40489125 40489483 -99827282 - L1MDa LINE L1 -2602 3938 3568 6695 83 23 19 chr10 40489485 40489575 -99827190 - L1MA3 LINE L1 0 6305 6217 2087 128 7 7 chr10 40489575 40489872 -99826893 + AluSg SINE Alu 1 297 -13 6695 83 23 19 chr10 40489872 40490752 -99826013 - L1MA3 LINE L1 -88 6217 5331 * 10848 162 12 7 chr10 40490749 40492485 -99824280 - L1M1 LINE L1 -5807 1758 14 1533 266 46 14 chr10 40492720 40493239 -99823526 - L1ME3A LINE L1 -260 5910 5375 2409 124 40 26 chr10 40493250 40493628 -99823137 + MSTC LTR MaLR 1 383 -45 841 171 42 10 chr10 40493646 40493839 -99822926 - L1MDa LINE L1 -3530 3010 2812 * 2325 193 95 83 chr10 40493836 40494131 -99822634 - L1MDa LINE L1 -4000 2540 2250 2087 119 3 3 chr10 40494131 40494455 -99822310 - AluSx SINE Alu 0 324 1 2325 193 95 83 chr10 40494455 40494992 -99821773 - L1MDa LINE L1 -4290 2250 1697 303 184 0 6 chr10 40494997 40495072 -99821693 + MLT2B1 LTR ERVL 443 520 0 1322 257 169 35 chr10 40495078 40495701 -99821064 + L1MC4a LINE L1 6784 7489 -319 404 256 133 15 chr10 40495704 40495899 -99820866 + L1MC4 LINE L1 7759 7976 -66 763 265 51 8 chr10 40496043 40496277 -99820488 + MIR SINE MIR 18 261 -1 2683 73 35 0 chr10 40496625 40496968 -99819797 + THE1A LTR MaLR 1 355 0 472 255 145 30 chr10 40497428 40497783 -99818982 - MLT1H LTR MaLR -2 547 125 270 342 29 23 chr10 40498137 40498444 -99818321 + L1ME3A LINE L1 4978 5286 -860 666 284 41 5 chr10 40498454 40498648 -99818117 + MER63A DNA MER1_type 4 204 -6 1022 288 92 42 chr10 40498649 40498712 -99818053 + L1ME3A LINE L1 5285 5343 -827 2182 141 79 12 chr10 40498712 40499117 -99817648 - MSTB1 LTR MaLR 0 432 1 1022 288 92 42 chr10 40499117 40499720 -99817045 + L1ME3A LINE L1 5343 5984 -186 444 19 0 0 chr10 40500321 40500374 -99816391 + (CA)n Simple_repeat Simple_repeat 2 54 0 1097 183 18 14 chr10 40501062 40501281 -99815484 - AluJb SINE Alu -8 304 85 1009 282 120 30 chr10 40501301 40501833 -99814932 + L1MC4a LINE L1 5316 5895 -1913 862 221 89 70 chr10 40502240 40502656 -99814109 + MLT1H1 LTR MaLR 96 368 -6 1014 141 82 5 chr10 40503005 40503189 -99813576 + L1PB1 LINE L1 3 200 -6663 3274 113 58 16 chr10 40503189 40503693 -99813072 + L1PB1 LINE L1 634 1158 -5705 992 94 0 8 chr10 40503708 40503835 -99812930 - AluSp/q SINE Alu -20 293 168 2554 92 129 1 chr10 40503836 40504284 -99812481 + L1PB1 LINE L1 2521 3025 -3837 550 97 0 0 chr10 40504285 40504357 -99812408 - L1PBa LINE L1 -4385 2478 2407 4624 60 15 32 chr10 40504358 40505407 -99811358 - MER11A LTR ERVK 0 1266 1 1820 87 64 0 chr10 40505407 40505673 -99811092 - L1PBa LINE L1 -4453 2410 2128 * 13612 172 9 29 chr10 40505672 40509533 -99807232 + L1PB1 LINE L1 3032 6823 -44 656 243 53 21 chr10 40510032 40510221 -99806544 + MER58A DNA MER1_type 18 212 -12 2060 144 0 0 chr10 40510380 40510671 -99806094 + AluSx SINE Alu 1 291 -21 230 219 36 95 chr10 40510673 40510810 -99805955 + L1ME4a LINE L1 5255 5383 -2425 308 319 76 29 chr10 40510882 40511264 -99805501 + L1ME4a LINE L1 5492 5891 -230 216 171 0 0 chr10 40511309 40511344 -99805421 + (TG)n Simple_repeat Simple_repeat 2 36 0 685 276 134 30 chr10 40511407 40511868 -99804897 - MLT1J LTR MaLR 0 511 3 832 156 16 0 chr10 40512123 40512251 -99804514 + AluJb SINE Alu 3 132 -180 1145 233 66 3 chr10 40512517 40512804 -99803961 + L1MDb LINE L1 18 322 -6087 1791 188 53 53 chr10 40512804 40513309 -99803456 - MLT1D LTR MaLR 0 505 1 1182 226 22 194 chr10 40513311 40514081 -99802684 - MLT1D-int LTR MaLR -2 1369 732 * 3327 187 81 45 chr10 40514079 40514925 -99801840 + L1MDb LINE L1 324 1295 -5111 2102 86 54 4 chr10 40514925 40515204 -99801561 + AluY SINE Alu 2 294 -17 3327 187 81 45 chr10 40515204 40515611 -99801154 + L1MDb LINE L1 1295 1686 -4720 1595 206 34 6 chr10 40515698 40516095 -99800670 - MLT2B1 LTR ERVL -59 456 3 521 222 169 29 chr10 40516098 40516305 -99800460 - L1MC4a LINE L1 -1027 6781 6546 1487 199 14 7 chr10 40516305 40516592 -99800173 + LOR1b LTR ERV1 65 353 -108 458 81 189 0 chr10 40516580 40516654 -99800111 + LOR1a LTR ERV1 410 497 0 * 429 294 107 56 chr10 40516781 40517638 -99799127 - L1MEc LINE L1 -2416 3799 2862 2289 96 3 0 chr10 40517638 40517929 -99798836 + AluSc SINE Alu 1 292 -17 429 294 107 56 chr10 40517929 40518272 -99798493 - L1MEc LINE L1 -3353 2862 2538 237 226 16 0 chr10 40518380 40518442 -99798323 + HsTC2 DNA Tc2 2 64 -1834 334 222 100 11 chr10 40518444 40518534 -99798231 + L1MB1 LINE L1 6008 6105 -63 359 191 0 0 chr10 40518534 40518597 -99798168 + AluJ/FRAM SINE Alu 226 288 -14 321 178 27 0 chr10 40518614 40518687 -99798078 + L1MB1 LINE L1 6093 6167 -1 847 221 29 5 chr10 40518725 40518929 -99797836 + HsTC2 DNA Tc2 93 301 -1597 * 2683 218 93 30 chr10 40518923 40519343 -99797422 + HsTC2 DNA Tc2 146 538 -1362 2387 107 0 0 chr10 40519343 40519652 -99797113 + AluSx SINE Alu 1 309 -3 2683 218 93 30 chr10 40519652 40520099 -99796666 + HsTC2 DNA Tc2 538 1653 -247 1910 147 0 7 chr10 40520146 40520425 -99796340 - AluSx SINE Alu -15 297 21 356 256 41 20 chr10 40520430 40520625 -99796140 - L1MEc LINE L1 -3866 2349 2180 588 302 98 23 chr10 40521082 40521595 -99795170 - HAL1 LINE L1 -849 1658 1108 869 262 172 11 chr10 40521640 40522006 -99794759 - L1MC4a LINE L1 -2056 5752 5328 764 284 53 82 chr10 40522234 40522700 -99794065 - L1MC4a LINE L1 -807 5339 4914 2314 89 3 3 chr10 40522700 40523004 -99793761 + AluY SINE Alu 3 306 -5 764 284 53 82 chr10 40523004 40523499 -99793266 - L1MC4a LINE L1 -1232 4914 4406 1733 179 0 26 chr10 40523528 40523836 -99792929 - AluJo SINE Alu -10 302 3 3719 180 41 25 chr10 40523907 40524711 -99792054 - L1MB7 LINE L1 -85 6099 5283 674 354 80 31 chr10 40524907 40525499 -99791266 - L1MC4a LINE L1 -2024 4122 3483 2025 171 118 12 chr10 40525499 40525921 -99790844 - MLT1C LTR MaLR 0 467 1 674 354 80 31 chr10 40525921 40526090 -99790675 - L1MC4a LINE L1 -2663 3483 3324 584 249 43 80 chr10 40526370 40526695 -99790070 - L1ME1 LINE L1 -16 6150 5838 201 217 29 87 chr10 40530676 40530745 -99786020 - L2 LINE L2 -1 3271 3207 282 225 80 123 chr10 40532018 40532156 -99784609 - MIR SINE MIR -81 181 50 255 320 55 32 chr10 40532280 40532499 -99784266 + L1M4 LINE L1 4943 5166 -980 227 264 0 0 chr10 40533062 40533115 -99783650 + (TG)n Simple_repeat Simple_repeat 2 54 0 3774 116 11 20 chr10 40533691 40534244 -99782521 + LTR14 LTR ERVK 1 548 0 382 239 255 8 chr10 40535888 40536139 -99780626 - L2 LINE L2 -176 3137 2825 994 257 44 42 chr10 40536457 40536858 -99779907 + L1MD1 LINE L1 338 1047 -5493 * 9597 210 51 54 chr10 40536853 40539917 -99776848 + L1MD1 LINE L1 1345 4418 -2218 697 176 7 0 chr10 40539917 40540059 -99776706 + L1MB4 LINE L1 6037 6179 -1 9597 210 51 54 chr10 40540059 40541330 -99775435 + L1MD1 LINE L1 4418 5642 -994 1746 137 0 4 chr10 40541330 40541600 -99775165 + AluSg SINE Alu 35 303 -7 9597 210 51 54 chr10 40541600 40541960 -99774805 + L1MD1 LINE L1 5642 6002 -634 * 36977 64 4 3 chr10 40541959 40547504 -99769261 + L1PA5 LINE L1 603 6152 -2 1599 164 40 16 chr10 40547629 40547933 -99768832 + AluSx SINE Alu 1 311 -1 3119 144 13 105 chr10 40547934 40548637 -99768128 + L1MD1 LINE L1 5999 6636 0 766 292 51 48 chr10 40548743 40549137 -99767628 - HAL1 LINE L1 -7 2500 2106 394 315 142 23 chr10 40549158 40549552 -99767213 - L2 LINE L2 -1 3312 2872 1351 208 64 9 chr10 40551057 40551403 -99765362 - MLT1A1 LTR MaLR 0 365 1 201 279 81 0 chr10 40551974 40552085 -99764680 - L2 LINE L2 -825 2489 2370 296 152 0 0 chr10 40554357 40554403 -99762362 - MLT1L LTR MaLR -221 394 349 472 302 63 31 chr10 40554854 40555076 -99761689 - L3 LINE CR1 -38 1539 1311 2452 271 69 31 chr10 40555121 40556292 -99760473 + L1MEc LINE L1 974 2189 -4207 3147 236 138 28 chr10 40556318 40556641 -99760124 + L1M4b LINE L1 17 303 -6556 1596 249 64 19 chr10 40556641 40557122 -99759643 + MLT1D LTR MaLR 3 505 0 3147 236 138 28 chr10 40557122 40557720 -99759045 + L1M4b LINE L1 303 1039 -5820 443 279 105 22 chr10 40557754 40558020 -99758745 - L1M4 LINE L1 -1076 5070 4785 497 349 49 29 chr10 40558063 40558677 -99758088 - L1MEd LINE L1 -5483 636 11 1894 133 10 26 chr10 40559009 40559311 -99757454 + AluJb SINE Alu 1 297 -15 4611 212 74 18 chr10 40562143 40563746 -99753019 - L1MD1 LINE L1 0 6242 4538 4764 238 53 6 chr10 40563748 40565145 -99751620 - L1MD1 LINE L1 -1702 4444 2983 243 185 0 15 chr10 40565433 40565498 -99751267 - L1ME4a LINE L1 -9 6112 6049 2397 122 0 21 chr10 40565582 40565958 -99750807 - L1PB1 LINE L1 -2 6149 5782 315 0 0 0 chr10 40565993 40566028 -99750737 + (CA)n Simple_repeat Simple_repeat 2 36 0 3836 117 1 13 chr10 40566034 40566222 -99750543 - L1PB1 LINE L1 -360 5791 5602 4743 166 52 50 chr10 40566222 40567291 -99749474 + MER11C LTR ERVK 1 1071 0 3836 117 1 13 chr10 40567291 40567863 -99748902 - L1PB1 LINE L1 -549 5602 5039 444 245 180 12 chr10 40567875 40568120 -99748645 - L1ME4a LINE L1 -241 5880 5595 38 0 0 0 chr10 40570615 40570653 -99746112 + AT_rich Low_complexity Low_complexity 1 38 0 802 180 267 8 chr10 40570708 40570951 -99745814 - L1MA9 LINE L1 -74 6238 5934 1994 132 0 3 chr10 40570951 40571255 -99745510 + AluSp SINE Alu 1 303 -10 802 180 267 8 chr10 40571255 40571267 -99745498 - L1MA9 LINE L1 -378 5934 5926 8936 204 30 50 chr10 40571281 40571670 -99745095 + L1 LINE L1 2546 2941 -3205 2270 90 3 0 chr10 40571670 40571971 -99744794 + AluSq SINE Alu 1 302 -11 8936 204 30 50 chr10 40571971 40574506 -99742259 + L1 LINE L1 2941 5336 -810 2241 64 3 32 chr10 40575257 40575569 -99741196 - AluY SINE Alu 0 311 9 967 235 66 85 chr10 40576067 40576848 -99739917 + HSREP522 Satellite telomeric 1 765 -267 1997 133 0 3 chr10 40578025 40578319 -99738446 - AluSx SINE Alu -19 293 1 376 317 7 0 chr10 40578339 40578481 -99738284 + CT-rich Low_complexity Low_complexity 2 144 0 1314 176 86 8 chr10 40579710 40579966 -99736799 + LOR1-int LTR ERV1 2079 2354 -3592 829 185 36 5 chr10 40579965 40580160 -99736605 + LOR1-int LTR ERV1 1839 2039 -6081 * 2512 154 52 4 chr10 40580174 40580636 -99736129 + LOR1-int LTR ERV1 2745 3228 -2718 357 204 92 71 chr10 40580640 40580836 -99735929 + LOR1-int LTR ERV1 3329 3528 -2418 264 333 0 0 chr10 40581106 40581190 -99735575 + L1MC/D LINE L1 5697 5780 -2028 21 0 0 0 chr10 40582221 40582242 -99734523 + AT_rich Low_complexity Low_complexity 1 21 0 940 248 28 0 chr10 40582454 40582672 -99734093 - MER58A DNA MER1_type 0 224 1 2148 177 40 113 chr10 40582721 40583350 -99733415 - LTR9 LTR ERV1 0 612 30 2070 134 0 13 chr10 40583350 40583655 -99733110 - AluSx SINE Alu -11 301 1 2148 177 40 113 chr10 40583655 40583670 -99733095 - LTR9 LTR ERV1 -582 30 15 1827 149 3 44 chr10 40583794 40583938 -99732827 + AluSx SINE Alu 1 149 -163 2045 86 0 0 chr10 40583938 40584194 -99732571 + AluSg SINE Alu 43 298 -12 1827 149 3 44 chr10 40584194 40584364 -99732401 + AluSx SINE Alu 149 302 -10 892 176 45 11 chr10 40584811 40584987 -99731778 - MLT1A2 LTR MaLR -4 370 189 268 222 13 12 chr10 40585007 40585257 -99731508 + GA-rich Low_complexity Low_complexity 1 250 0 736 162 45 39 chr10 40585288 40585442 -99731323 - MLT1A2 LTR MaLR -215 159 5 1234 208 20 0 chr10 40585473 40585728 -99731037 + MLT1B LTR MaLR 9 268 -122 4448 105 126 146 chr10 40585728 40587238 -99729527 + pTR5 LTR ERV1 743 2438 0 624 147 18 0 chr10 40587242 40587351 -99729414 + MLT1B LTR MaLR 266 376 -14 2207 109 0 0 chr10 40588190 40588484 -99728281 + AluSq SINE Alu 1 294 -19 4315 179 42 20 chr10 40588938 40589839 -99726926 - MER49 LTR ERV1 -2 921 1 1786 140 57 0 chr10 40590734 40591013 -99725752 - AluJb SINE Alu -17 295 1 2317 88 0 26 chr10 40591021 40591327 -99725438 - AluSx SINE Alu -14 298 1 38 0 0 0 chr10 40591327 40591365 -99725400 + AT_rich Low_complexity Low_complexity 1 38 0 1419 184 15 0 chr10 40591365 40591636 -99725129 - L1PA16 LINE L1 -14 6152 5878 205 302 56 79 chr10 40591636 40591762 -99725003 - L2 LINE L2 -8 3264 3142 1342 139 4 62 chr10 40594465 40594537 -99722228 - Tigger5 DNA MER2_type 0 2323 2248 1913 145 26 0 chr10 40594537 40594841 -99721924 + AluSx SINE Alu 1 312 0 1342 139 4 62 chr10 40594841 40595012 -99721753 - Tigger5 DNA MER2_type -75 2248 2094 1745 173 6 43 chr10 40596078 40596401 -99720364 - AluJo SINE Alu -1 311 1 712 183 85 12 chr10 40597121 40597285 -99719480 + MLT1B LTR MaLR 2 177 -213 522 167 48 24 chr10 40597330 40597498 -99719267 + (TCTCTG)n Simple_repeat Simple_repeat 3 174 0 659 202 105 20 chr10 40597501 40597685 -99719080 + MLT1B LTR MaLR 204 374 -16 268 324 112 0 chr10 40599087 40599257 -99717508 + MIR SINE MIR 74 262 0 257 61 0 0 chr10 40599987 40600020 -99716745 - L2 LINE L2 -19 3294 3262 1959 180 30 22 chr10 40600585 40600985 -99715780 - MER57A LTR ERV1 0 403 1 2230 103 0 42 chr10 40601410 40601721 -99715044 - AluSx SINE Alu -14 298 1 461 175 66 81 chr10 40602229 40602440 -99714325 + Charlie4a DNA MER1_type 207 414 -94 382 193 104 15 chr10 40602456 40602591 -99714174 + Charlie4a DNA MER1_type 356 502 -6 197 191 24 0 chr10 40602689 40602731 -99714034 + L2 LINE L2 3265 3307 -6 1440 193 57 33 chr10 40602968 40603336 -99713429 + LTR40b LTR ERVL 84 460 -2 1615 200 29 0 chr10 40604165 40604445 -99712320 - AluJo SINE Alu -24 288 1 720 219 65 145 chr10 40604447 40604625 -99712140 - L1ME LINE L1 -5165 905 714 2355 79 0 7 chr10 40604625 40604916 -99711849 - AluSg SINE Alu -21 289 1 720 219 65 145 chr10 40604916 40604941 -99711824 - L1ME LINE L1 -5356 714 689 2164 102 7 7 chr10 40604941 40605236 -99711529 + AluSp SINE Alu 1 295 -18 720 219 65 145 chr10 40605236 40605279 -99711486 - L1ME LINE L1 -5381 689 644 2087 127 10 19 chr10 40605279 40605587 -99711178 + AluSq SINE Alu 1 305 -8 720 219 65 145 chr10 40605587 40605995 -99710770 - L1ME LINE L1 -5426 644 301 3376 231 117 33 chr10 40606046 40607169 -99709596 - L1MC4 LINE L1 -299 7743 6527 1781 164 27 7 chr10 40608751 40609049 -99707716 - AluJb SINE Alu -8 304 1 2043 146 0 3 chr10 40609080 40609374 -99707391 + AluSg SINE Alu 1 293 -17 312 237 44 53 chr10 40609698 40609812 -99706953 - MLT1K LTR MaLR -323 265 153 231 290 32 0 chr10 40609930 40609992 -99706773 + L1 LINE L1 4911 4974 -1172 344 256 202 42 chr10 40610301 40610469 -99706296 - MLT1L LTR MaLR 0 615 421 775 266 40 0 chr10 40610789 40611011 -99705754 - MIR SINE MIR -21 241 11 336 269 0 0 chr10 40611013 40611091 -99705674 + MER58 DNA MER1_type 1 78 -137 25 0 0 0 chr10 40611457 40611482 -99705283 + AT_rich Low_complexity Low_complexity 1 25 0 2302 152 11 48 chr10 40611609 40612043 -99704722 - LTR3 LTR ERVK -10 422 5 6502 119 51 16 chr10 40612219 40613253 -99703512 + MER11C LTR ERVK 1 1071 0 2058 116 27 7 chr10 40613488 40613781 -99702984 - AluSx SINE Alu -11 301 3 1143 166 21 0 chr10 40613970 40614163 -99702602 + Tigger6 DNA MER2_type 1 197 -886 44285 45 4 3 chr10 40614165 40620314 -99696451 + L1PA4 LINE L1 2 6155 0 826 220 11 11 chr10 40620323 40620500 -99696265 + Tigger6 DNA MER2_type 182 358 -1239 2254 108 7 0 chr10 40620511 40620806 -99695959 + AluSg SINE Alu 1 297 -13 250 306 0 0 chr10 40620819 40620881 -99695884 + Tigger6 DNA MER2_type 1536 1597 0 1841 108 8 0 chr10 40621531 40621780 -99694985 + AluSx SINE Alu 41 291 -21 893 156 54 6 chr10 40621879 40622046 -99694719 + L1M3 LINE L1 5446 5620 -563 1637 165 71 43 chr10 40622051 40622403 -99694362 - MLT1B LTR MaLR -3 387 26 860 176 77 12 chr10 40622390 40622515 -99694250 + MLT2C1 LTR ERVL 217 357 -40 * 210 118 0 0 chr10 40622515 40622549 -99694216 + (CA)n Simple_repeat Simple_repeat 2 35 0 860 176 77 12 chr10 40622549 40622593 -99694172 + MLT2C1 LTR ERVL 357 397 0 376 211 56 106 chr10 40622653 40622833 -99693932 + MLT1D LTR MaLR 335 505 0 1955 139 37 7 chr10 40623301 40623596 -99693169 - AluSx SINE Alu -8 304 1 233 280 10 5 chr10 40624448 40624538 -99692227 + MIR SINE MIR 54 144 -64 240 267 95 52 chr10 40625369 40625485 -99691280 + MIR SINE MIR 77 197 -65 7790 29 17 0 chr10 40626062 40627225 -99689540 - L1PA2 LINE L1 -1 6154 4985 15523 33 2 1 chr10 40627225 40629066 -99687699 + L1PA2 LINE L1 3171 5014 -1132 255 203 176 0 chr10 40629580 40629654 -99687111 + MLT1C LTR MaLR 6 92 -375 286 122 0 0 chr10 40629908 40629949 -99686816 - MER70-int LTR ERVL -2428 2595 2555 852 201 34 95 chr10 40630735 40630999 -99685766 + MLT1C-int LTR MaLR 1123 1370 -1 2068 166 30 38 chr10 40631007 40631478 -99685287 + MLT1C LTR MaLR 1 467 0 978 238 23 4 chr10 40631855 40632111 -99684654 + L1M4 LINE L1 4951 5211 -935 2297 92 7 0 chr10 40632348 40632640 -99684125 - AluSp SINE Alu -19 294 1 451 326 50 16 chr10 40632778 40633036 -99683729 + ERVL LTR ERVL 2064 2330 -3434 836 322 106 56 chr10 40633256 40634491 -99682274 + ERVL LTR ERVL 2698 4002 -1483 382 363 20 0 chr10 40634660 40634864 -99681901 + ERVL LTR ERVL 4203 4410 -1244 321 176 12 35 chr10 40635375 40635460 -99681305 - L1M4 LINE L1 -978 5168 5086 234 221 44 0 chr10 40635456 40635524 -99681241 + L1MB7 LINE L1 4677 4747 -1399 * 2141 129 0 0 chr10 40635524 40635818 -99680947 + AluY SINE Alu 1 294 -17 24 53 0 0 chr10 40635818 40635856 -99680909 + AT_rich Low_complexity Low_complexity 1 38 0 326 222 33 0 chr10 40635859 40635949 -99680816 + L1MB7 LINE L1 4741 4833 -1313 207 0 0 0 chr10 40636034 40636057 -99680708 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1270 215 96 45 chr10 40636058 40636513 -99680252 + L1MB7 LINE L1 4845 5275 -909 2248 103 23 0 chr10 40636513 40636813 -99679952 + AluSq SINE Alu 1 307 -6 1270 215 96 45 chr10 40636813 40636865 -99679900 + L1MB7 LINE L1 5275 5323 -861 2134 138 0 0 chr10 40636865 40637162 -99679603 + AluSx SINE Alu 1 297 -15 1270 215 96 45 chr10 40637162 40637399 -99679366 + L1MB7 LINE L1 5323 5939 -245 1395 157 0 0 chr10 40637403 40637613 -99679152 - AluSg/x SINE Alu -17 295 86 501 234 101 10 chr10 40637615 40637824 -99678941 + L1MB7 LINE L1 5941 6168 -16 2329 74 0 32 chr10 40638506 40638817 -99677948 + AluY SINE Alu 1 301 -10 1595 179 17 30 chr10 40638825 40638957 -99677808 + AluJo SINE Alu 1 133 -179 2359 77 3 22 chr10 40638957 40639235 -99677530 + AluSc SINE Alu 1 274 -35 243 0 0 0 chr10 40639235 40639262 -99677503 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 2359 77 3 22 chr10 40639262 40639296 -99677469 + AluSc SINE Alu 274 307 -2 1595 179 17 30 chr10 40639296 40639465 -99677300 + AluJo SINE Alu 133 298 -14 2324 77 40 3 chr10 40639569 40639868 -99676897 - AluY SINE Alu -1 310 1 343 180 0 0 chr10 40640255 40640316 -99676449 + L1MD3 LINE L1 6877 6937 -1058 1016 262 162 27 chr10 40640353 40640804 -99675961 - REP3 LTR ERV -50 512 1 491 213 140 0 chr10 40640804 40640968 -99675797 + L1MC3 LINE L1 6911 7097 -688 330 259 0 12 chr10 40640978 40641059 -99675706 + MLT1F1 LTR MaLR 46 125 -442 2063 203 91 15 chr10 40641059 40641578 -99675187 + L1MD3 LINE L1 7404 7969 -26 2214 93 0 10 chr10 40641578 40641869 -99674896 + AluSg SINE Alu 1 288 -22 2063 203 91 15 chr10 40641869 40641897 -99674868 + L1MD3 LINE L1 7969 7993 -2 1830 159 14 10 chr10 40644749 40645044 -99671721 - AluSx SINE Alu -15 297 2 650 181 39 8 chr10 40645554 40645681 -99671084 - MIR SINE MIR -67 195 65 3901 173 50 21 chr10 40645781 40646970 -99669795 + L1MB7 LINE L1 4947 6168 -16 389 243 35 28 chr10 40646981 40647125 -99669640 + L1MC4a LINE L1 5814 5958 -1850 21 104 0 0 chr10 40647738 40647815 -99668950 + AT_rich Low_complexity Low_complexity 1 77 0 1808 108 0 0 chr10 40647866 40648098 -99668667 + AluSc SINE Alu 62 293 -16 338 312 95 11 chr10 40648234 40648423 -99668342 + L1ME LINE L1 4811 5015 -1131 901 160 0 14 chr10 40648452 40648596 -99668169 + FLAM_C SINE Alu 1 142 -1 4559 103 0 2 chr10 40648647 40649278 -99667487 - L1PA15 LINE L1 -13 6152 5523 2370 103 0 0 chr10 40649286 40649588 -99667177 - AluSx SINE Alu -10 302 1 2068 124 0 0 chr10 40649622 40649912 -99666853 + AluY SINE Alu 2 291 -20 293 274 98 13 chr10 40650147 40650304 -99666461 + L1ME LINE L1 5360 5528 -638 1695 169 20 23 chr10 40651349 40651650 -99665115 - AluJo SINE Alu -12 300 1 356 295 74 25 chr10 40652495 40652617 -99664148 + MIR3 SINE MIR 3 130 -78 731 100 0 17 chr10 40652617 40652737 -99664028 - AluJb SINE Alu 0 312 195 22 56 0 0 chr10 40652900 40652936 -99663829 + AT_rich Low_complexity Low_complexity 1 36 0 1687 152 0 28 chr10 40652943 40653268 -99663497 - AluJb SINE Alu 0 317 1 300 240 13 0 chr10 40653791 40653866 -99662899 + L1M4 LINE L1 4866 4941 -1205 227 232 73 12 chr10 40653862 40653944 -99662821 + L1M4 LINE L1 2300 2386 -3760 * 819 195 129 9 chr10 40653955 40654165 -99662600 + MER93b LTR ERV1 113 347 -26 249 222 0 19 chr10 40654351 40654405 -99662360 + (CATATA)n Simple_repeat Simple_repeat 1 53 0 472 191 42 1 chr10 40654456 40654572 -99662193 - L1ME LINE L1 -452 5718 5598 2739 169 12 46 chr10 40654581 40655510 -99661255 - L1M3 LINE L1 -374 6045 5151 1187 118 0 0 chr10 40655510 40655671 -99661094 - AluSg/x SINE Alu -12 298 138 7222 199 84 96 chr10 40655672 40656798 -99659967 - L1M3 LINE L1 -1226 5156 4018 2069 144 0 22 chr10 40656798 40657111 -99659654 - AluSx SINE Alu -6 306 1 7222 199 84 96 chr10 40657111 40657793 -99658972 - L1M3 LINE L1 -2364 4018 3330 2071 161 0 0 chr10 40657793 40658104 -99658661 - AluSx SINE Alu -1 311 1 7222 199 84 96 chr10 40658104 40659009 -99657756 - L1M3 LINE L1 -3052 3330 2416 14598 143 39 30 chr10 40659009 40659952 -99656813 + Tigger2 DNA MER2_type 1 934 -1784 196 51 26 26 chr10 40659952 40659991 -99656774 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 14598 143 39 30 chr10 40659991 40660079 -99656686 + Tigger2 DNA MER2_type 934 1020 -1698 1748 169 6 44 chr10 40660079 40660399 -99656366 + AluJb SINE Alu 1 308 -4 14598 143 39 30 chr10 40660399 40660485 -99656280 + Tigger2 DNA MER2_type 1020 1104 -1614 2092 134 0 3 chr10 40660485 40660783 -99655982 + AluJb SINE Alu 6 302 -10 14598 143 39 30 chr10 40660783 40662356 -99654409 + Tigger2 DNA MER2_type 1104 2718 0 7222 199 84 96 chr10 40662356 40663580 -99653185 - L1M3 LINE L1 -3966 2416 1297 2172 113 10 16 chr10 40663580 40663890 -99652875 - AluSx SINE Alu -4 308 1 7222 199 84 96 chr10 40663890 40665018 -99651747 - L1M3 LINE L1 -5085 1297 157 2913 249 48 19 chr10 40665008 40665880 -99650885 - L1M4b LINE L1 -5873 986 90 * 21 0 0 0 chr10 40665893 40665914 -99650851 + AT_rich Low_complexity Low_complexity 1 21 0 2386 82 0 19 chr10 40666425 40666742 -99650023 - AluY SINE Alu 0 311 1 401 230 0 0 chr10 40669567 40669641 -99647124 - L1M4b LINE L1 -6775 84 11 234 226 65 16 chr10 40669650 40669712 -99647053 + L2 LINE L2 3167 3231 -82 596 297 43 5 chr10 40669791 40669976 -99646789 - MIR SINE MIR -70 192 1 28 29 0 0 chr10 40671085 40671120 -99645645 + AT_rich Low_complexity Low_complexity 1 35 0 1452 140 9 0 chr10 40671177 40671405 -99645360 + MER30 DNA MER1_type 1 230 0 2512 81 0 0 chr10 40671580 40671889 -99644876 + AluSc SINE Alu 1 309 0 2176 136 0 0 chr10 40672089 40672398 -99644367 - AluSx SINE Alu -1 311 3 1281 223 130 30 chr10 40672509 40672971 -99643794 - MLT2B2 LTR ERVL -7 508 1 2402 76 0 22 chr10 40673200 40673514 -99643251 - AluY SINE Alu -4 307 1 1850 179 0 7 chr10 40673966 40674267 -99642498 - AluJb SINE Alu -13 299 1 236 250 46 40 chr10 40674466 40674618 -99642147 + L1ME LINE L1 5671 5823 -298 226 300 73 0 chr10 40676583 40676693 -99640072 - MER112 DNA MER1_type -45 215 98 302 209 229 46 chr10 40676739 40676892 -99639873 + L2 LINE L2 2964 3144 -169 435 270 135 30 chr10 40677744 40677944 -99638821 + LTR33 LTR ERVL 301 521 0 280 273 0 0 chr10 40679128 40679137 -99637628 + (TA)n Simple_repeat Simple_repeat 2 10 -68 1789 160 117 10 chr10 40679137 40679530 -99637235 + MER63B DNA MER1_type 1 435 -1 280 273 0 0 chr10 40679530 40679597 -99637168 + (TA)n Simple_repeat Simple_repeat 9 78 0 197 65 32 0 chr10 40682675 40682706 -99634059 + (TAA)n Simple_repeat Simple_repeat 1 32 0 180 111 0 0 chr10 40683553 40683580 -99633185 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 223 271 7 21 chr10 40684119 40684204 -99632561 + GA-rich Low_complexity Low_complexity 2 138 0 491 268 0 0 chr10 40684206 40684318 -99632447 + MER58C DNA MER1_type 104 215 0 1466 299 89 30 chr10 40684318 40685228 -99631537 + L2 LINE L2 2176 3150 -163 354 143 0 0 chr10 40685272 40685335 -99631430 + (CA)n Simple_repeat Simple_repeat 2 64 0 2087 114 0 4 chr10 40685627 40685939 -99630826 - AluSc SINE Alu 0 311 1 303 348 9 17 chr10 40686791 40686906 -99629859 - L2 LINE L2 -23 3249 3136 281 295 0 13 chr10 40687267 40687416 -99629349 + L1MC/D LINE L1 979 1125 -5247 1767 256 46 5 chr10 40687434 40687875 -99628890 + MER68 LTR ERV1 1 532 -73 385 200 12 12 chr10 40687878 40687958 -99628807 + L1MC3 LINE L1 6669 6748 -1037 291 93 0 0 chr10 40688027 40688070 -99628695 + (CA)n Simple_repeat Simple_repeat 2 44 0 296 267 0 0 chr10 40688072 40688158 -99628607 + L1MC/D LINE L1 1041 1126 -5258 * 1670 231 54 32 chr10 40688136 40688724 -99628041 + L1MC/D LINE L1 2654 3254 -3128 1472 208 57 6 chr10 40688697 40689153 -99627612 + L1MC/D LINE L1 5356 5841 -743 * 1168 131 17 0 chr10 40689157 40689333 -99627432 + AluSg/x SINE Alu 131 309 -3 794 178 89 23 chr10 40689333 40689547 -99627218 + L1MC3 LINE L1 6756 6983 -802 3950 141 108 9 chr10 40689976 40690733 -99626032 + L1MC3 LINE L1 6945 7776 -9 1311 278 96 65 chr10 40690779 40691682 -99625083 + L1M4 LINE L1 3 933 -5609 2070 92 75 20 chr10 40691687 40691980 -99624785 + AluSc SINE Alu 1 309 0 1752 247 91 23 chr10 40691980 40692663 -99624102 + L1M4 LINE L1 981 1709 -4833 1779 226 193 26 chr10 40692684 40693408 -99623357 + L1M4 LINE L1 1803 2647 -3999 372 136 34 51 chr10 40693411 40693529 -99623236 + CT-rich Low_complexity Low_complexity 5 120 0 1653 179 13 22 chr10 40693531 40693844 -99622921 - AluJb SINE Alu -2 310 1 341 152 0 15 chr10 40693846 40693912 -99622853 + L1M4 LINE L1 2642 2706 -3940 370 303 130 30 chr10 40694032 40694263 -99622502 + L1MEc LINE L1 1541 1794 -4602 325 222 74 22 chr10 40694374 40694509 -99622256 + L1ME LINE L1 5430 5571 -591 1249 229 8 16 chr10 40694515 40694773 -99621992 + LTR39 LTR ERV1 528 783 0 546 200 246 73 chr10 40694775 40694878 -99621887 + L1MC5 LINE L1 7144 7228 -733 1546 181 9 48 chr10 40694878 40695193 -99621572 + AluJo SINE Alu 1 303 -9 546 200 246 73 chr10 40695193 40695553 -99621212 + L1MC5 LINE L1 7228 7687 -274 910 166 57 0 chr10 40695577 40695734 -99621031 - AluSg/x SINE Alu -27 285 120 517 136 12 0 chr10 40695734 40695815 -99620950 - AluS SINE Alu -6 304 223 783 235 47 13 chr10 40695943 40696177 -99620588 + L1MC4 LINE L1 7742 7983 -59 516 224 128 32 chr10 40696211 40696430 -99620335 + L1MC5 LINE L1 7692 7931 -30 1950 125 7 26 chr10 40696515 40696820 -99619945 + AluSx SINE Alu 1 299 -13 2120 113 3 13 chr10 40696828 40697130 -99619635 + AluSx SINE Alu 1 299 -13 285 318 75 16 chr10 40697423 40697678 -99619087 + HAL1 LINE L1 811 1080 -1427 857 214 22 56 chr10 40697679 40697857 -99618908 + FRAM SINE Alu 1 172 -4 2080 91 7 20 chr10 40697926 40698223 -99618542 + AluY SINE Alu 1 293 -18 2120 127 0 7 chr10 40698317 40698609 -99618156 + AluSg SINE Alu 1 290 -20 2313 227 41 34 chr10 40698922 40699630 -99617135 + L1MD2 LINE L1 4590 5302 -844 3215 129 42 2 chr10 40699636 40700144 -99616621 + MER34B LTR ERV1 1 510 -55 1585 171 91 86 chr10 40700181 40700492 -99616273 + L1MD2 LINE L1 5330 5638 -721 2378 88 3 0 chr10 40700492 40700787 -99615978 + AluSp SINE Alu 1 296 -17 1585 171 91 86 chr10 40700787 40701113 -99615652 + L1MD2 LINE L1 5638 6106 -253 316 139 0 0 chr10 40701117 40701160 -99615605 + Alu SINE Alu 240 282 -20 359 149 37 0 chr10 40701164 40701271 -99615494 + (TA)n Simple_repeat Simple_repeat 1 111 0 638 266 119 40 chr10 40701324 40701397 -99615368 + L1MC4a LINE L1 1226 1292 -5104 1995 84 62 7 chr10 40701397 40701671 -99615094 - AluSc SINE Alu -20 289 1 638 266 119 40 chr10 40701671 40701905 -99614860 + L1MC4a LINE L1 1292 1506 -4890 2140 103 0 7 chr10 40701905 40702206 -99614559 - AluSx SINE Alu -13 299 1 638 266 119 40 chr10 40702206 40702596 -99614169 + L1MC4a LINE L1 1506 1979 -4417 279 276 68 45 chr10 40702609 40702873 -99613892 + L1MC4a LINE L1 5041 5310 -905 1158 283 165 9 chr10 40702904 40703431 -99613334 + L1MC4a LINE L1 5365 5973 -1904 257 259 25 12 chr10 40703436 40703517 -99613248 + MER5A DNA MER1_type 28 109 -80 553 214 53 30 chr10 40703701 40703832 -99612933 - MER94 DNA DNA 0 134 1 221 322 58 50 chr10 40705360 40705481 -99611284 + MIR SINE MIR 25 146 -62 225 286 0 0 chr10 40706005 40706068 -99610697 - MIR SINE MIR -81 181 119 384 259 76 15 chr10 40706714 40706845 -99609920 + MIR SINE MIR 111 249 -13 1662 167 60 18 chr10 40707381 40707621 -99609144 - L1MD3 LINE L1 0 7995 7736 6230 63 33 4 chr10 40707621 40708379 -99608386 - LTR17 LTR ERV1 0 780 1 1662 167 60 18 chr10 40708379 40708473 -99608292 - L1MD3 LINE L1 -259 7736 7647 438 151 55 14 chr10 40708485 40708558 -99608207 - AluS SINE Alu -236 77 2 1055 203 37 164 chr10 40708559 40709248 -99607517 + LTR8A LTR ERV1 138 714 -13 836 148 93 38 chr10 40709258 40709391 -99607374 - L1MD3 LINE L1 -402 7593 7446 1053 210 132 88 chr10 40709391 40709777 -99606988 + MER57A LTR ERV1 1 403 0 836 148 93 38 chr10 40709777 40709826 -99606939 - L1MD3 LINE L1 -549 7446 7401 374 191 225 0 chr10 40709836 40709925 -99606840 - MLT1F1 LTR MaLR -458 109 1 579 197 98 0 chr10 40709926 40710058 -99606707 - L1MC4a LINE L1 -581 7227 7083 258 180 40 0 chr10 40710062 40710112 -99606653 - MER4A LTR ERV1 0 664 613 804 167 92 46 chr10 40710115 40710289 -99606476 + AluSg1 SINE Alu 2 183 -126 997 133 0 78 chr10 40710289 40710469 -99606296 - MER4A LTR ERV1 -102 562 397 1990 134 0 3 chr10 40710469 40710785 -99605980 - AluSq SINE Alu 0 315 1 1289 197 38 84 chr10 40710793 40711072 -99605693 - L1M4 LINE L1 -945 5201 4947 2355 85 20 0 chr10 40711072 40711378 -99605387 - AluSq SINE Alu -1 312 1 1289 197 38 84 chr10 40711378 40711525 -99605240 - L1M4 LINE L1 -1199 4947 4795 1640 183 114 17 chr10 40711526 40711839 -99604926 + MSTD LTR MaLR 1 355 -41 2348 163 58 15 chr10 40711839 40712249 -99604516 + MSTA LTR MaLR 1 428 0 1640 183 114 17 chr10 40712249 40712296 -99604469 + MSTD LTR MaLR 355 396 0 2127 209 22 15 chr10 40712302 40712723 -99604042 + MSTD-int LTR MaLR 5 431 -1304 1588 115 0 41 chr10 40712723 40712966 -99603799 - AluSq SINE Alu -15 298 66 2127 209 22 15 chr10 40712966 40713003 -99603762 + MSTD-int LTR MaLR 431 466 -1269 2315 108 0 0 chr10 40713005 40713301 -99603464 - AluSx SINE Alu -16 296 1 2440 92 0 3 chr10 40713301 40713607 -99603158 - AluSg SINE Alu -5 305 1 654 215 96 28 chr10 40713789 40714061 -99602704 + MLT2D LTR ERVL 1 341 -73 694 109 10 0 chr10 40714388 40714482 -99602283 + MSTA LTR MaLR 3 97 -331 2387 43 43 70 chr10 40714482 40714827 -99601938 + LTR2B LTR ERV1 1 336 -154 266 231 77 22 chr10 40715327 40715418 -99601347 - MIR SINE MIR -88 120 25 290 256 427 0 chr10 40716170 40716287 -99600478 - MER5A DNA MER1_type 0 189 23 218 152 0 22 chr10 40716336 40716382 -99600383 + (TA)n Simple_repeat Simple_repeat 1 45 0 245 191 67 56 chr10 40716401 40716490 -99600275 - L1MC4 LINE L1 -1342 6700 6611 2255 102 0 10 chr10 40716675 40716988 -99599777 - AluSg SINE Alu 0 310 1 1401 181 40 0 chr10 40717414 40717691 -99599074 - L1MB5 LINE L1 -8 6664 6377 840 152 94 53 chr10 40717691 40717854 -99598911 - AluJo SINE Alu -15 297 125 4601 189 50 17 chr10 40717859 40719398 -99597367 - L1MB5 LINE L1 -291 6381 4780 2371 104 0 0 chr10 40719398 40719707 -99597058 - AluSc SINE Alu 0 309 1 4601 189 50 17 chr10 40719707 40719807 -99596958 - L1MB5 LINE L1 -1892 4780 4685 767 226 77 39 chr10 40719809 40720043 -99596722 - L1MB5 LINE L1 -5849 693 451 1828 166 12 98 chr10 40720227 40720389 -99596376 + MLT1B LTR MaLR 1 175 -215 2221 150 132 11 chr10 40720389 40720768 -99595997 - MSTA LTR MaLR -3 425 1 1828 166 12 98 chr10 40720768 40721032 -99595733 + MLT1B LTR MaLR 175 390 0 536 286 78 10 chr10 40721038 40721244 -99595521 - L1MB5 LINE L1 -6316 226 7 1959 168 124 24 chr10 40721439 40721898 -99594867 - MLT1D LTR MaLR 0 505 1 298 268 183 0 chr10 40722106 40722248 -99594517 - L1ME LINE L1 -304 5858 5691 1717 146 14 22 chr10 40722280 40722555 -99594210 + AluJo SINE Alu 1 273 -39 253 263 82 82 chr10 40722592 40722631 -99594134 - L1ME LINE L1 -565 5556 5518 2479 79 0 0 chr10 40722631 40722935 -99593830 - AluY SINE Alu -7 304 1 253 263 82 82 chr10 40722935 40723066 -99593699 - L1ME LINE L1 -602 5519 5386 2378 78 3 0 chr10 40723170 40723466 -99593299 - AluSp SINE Alu -15 298 2 180 0 0 0 chr10 40723466 40723486 -99593279 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1942 131 0 17 chr10 40723486 40723639 -99593126 - AluSx SINE Alu -26 286 139 1890 113 0 55 chr10 40723639 40723932 -99592833 - AluSq SINE Alu -14 299 23 1942 131 0 17 chr10 40723932 40724069 -99592696 - AluSx SINE Alu -173 139 1 1260 300 89 43 chr10 40724115 40724843 -99591922 - L1MC4a LINE L1 -1352 6525 5737 2197 104 10 16 chr10 40724843 40725152 -99591613 - AluSx SINE Alu -5 307 1 1260 300 89 43 chr10 40725152 40725425 -99591340 - L1MC4a LINE L1 -2140 5737 5478 2072 108 0 40 chr10 40725450 40725633 -99591132 - AluSx SINE Alu 0 308 119 189 0 0 0 chr10 40725633 40725654 -99591111 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2034 120 3 11 chr10 40725654 40725938 -99590827 - AluSg SINE Alu -28 282 1 2072 108 0 40 chr10 40725938 40726073 -99590692 - AluSx SINE Alu -187 121 1 1690 197 3 7 chr10 40726248 40726547 -99590218 + AluJo SINE Alu 1 298 -14 243 254 30 15 chr10 40726673 40726740 -99590025 + MER5B DNA MER1_type 1 68 -110 252 162 15 73 chr10 40726768 40726836 -99589929 - L1MC4 LINE L1 -504 7538 7475 2205 123 0 0 chr10 40726836 40727137 -99589628 - AluSg SINE Alu -9 301 1 941 278 71 22 chr10 40727312 40727967 -99588798 - L1MC4a LINE L1 -745 5488 4798 1323 210 241 22 chr10 40727973 40728260 -99588505 - MLT1E1 LTR MaLR 0 654 431 2361 77 0 0 chr10 40728260 40728546 -99588219 - AluSg SINE Alu -24 286 1 1323 210 241 22 chr10 40728546 40728719 -99588046 - MLT1E1 LTR MaLR -223 431 93 24 32 0 0 chr10 40728839 40728870 -99587895 + AT_rich Low_complexity Low_complexity 1 31 0 207 0 0 0 chr10 40728882 40728905 -99587860 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 848 156 0 14 chr10 40728913 40729054 -99587711 - AluSg/x SINE Alu -37 273 135 2033 95 53 0 chr10 40729101 40729384 -99587381 - AluSg SINE Alu -12 298 1 1081 254 45 89 chr10 40729384 40729663 -99587102 - L1MC4a LINE L1 -1476 4739 4449 2399 87 0 0 chr10 40729663 40729962 -99586803 - AluY SINE Alu -12 299 1 1081 254 45 89 chr10 40729962 40730038 -99586727 - L1MC4a LINE L1 -1766 4449 4371 2295 103 7 0 chr10 40730038 40730339 -99586426 - AluSp SINE Alu -10 303 1 1081 254 45 89 chr10 40730339 40730352 -99586413 - L1MC4a LINE L1 -1844 4371 4359 2158 113 0 0 chr10 40730352 40730652 -99586113 - AluY SINE Alu -11 300 1 1081 254 45 89 chr10 40730652 40730843 -99585922 - L1MC4a LINE L1 -1856 4359 4203 2470 80 3 0 chr10 40731161 40731461 -99585304 + AluSp SINE Alu 1 301 -12 2277 99 7 3 chr10 40732711 40733014 -99583751 + AluSx SINE Alu 1 304 -8 2092 290 97 33 chr10 40733035 40733709 -99583056 - L2 LINE L2 -31 3282 2653 2191 117 0 7 chr10 40733709 40734007 -99582758 + AluSx SINE Alu 1 296 -16 2092 290 97 33 chr10 40734007 40734554 -99582211 - L2 LINE L2 -660 2653 1982 1996 143 7 3 chr10 40735701 40735995 -99580770 + AluSx SINE Alu 1 295 -17 261 298 124 14 chr10 40736226 40736444 -99580321 + HAL1b LINE L1 231 472 -876 649 231 143 23 chr10 40736926 40737193 -99579572 - L1MC4a LINE L1 -3598 2617 2307 2288 103 3 3 chr10 40737193 40737493 -99579272 - AluSg SINE Alu -10 300 1 649 231 143 23 chr10 40737493 40737533 -99579232 - L1MC4a LINE L1 -3908 2307 2273 740 127 0 0 chr10 40737555 40737665 -99579100 - AluSx SINE Alu -9 303 194 1046 135 0 0 chr10 40737666 40737807 -99578958 - AluSx SINE Alu -172 141 1 488 262 93 16 chr10 40737812 40737995 -99578770 - L1MC4a LINE L1 -4102 2294 2098 252 88 0 0 chr10 40737997 40738031 -99578734 + Tigger4(Zombi) DNA MER2_type -2 31 -2700 417 257 26 0 chr10 40738032 40738145 -99578620 - MER45R DNA AcHobo -1023 558 443 757 241 20 30 chr10 40738314 40738517 -99578248 - MER45R DNA AcHobo -1377 204 4 956 265 104 15 chr10 40738519 40739242 -99577523 - L1M4 LINE L1 -2279 3867 3032 276 206 33 76 chr10 40739263 40739447 -99577318 + (CATATA)n Simple_repeat Simple_repeat 4 179 0 381 190 66 33 chr10 40739457 40739578 -99577187 + L1M4 LINE L1 3034 3158 -2988 1443 260 67 41 chr10 40739639 40740447 -99576318 - L1M4 LINE L1 -3185 2961 2133 2648 273 67 46 chr10 40740484 40741235 -99575530 - L1MC4a LINE L1 -4401 1995 1261 2417 81 7 0 chr10 40741235 40741542 -99575223 - AluSc SINE Alu 0 309 1 2648 273 67 46 chr10 40741542 40741673 -99575092 - L1MC4a LINE L1 -5135 1261 1134 1675 137 16 73 chr10 40741673 40741987 -99574778 - AluJb SINE Alu -4 308 13 2648 273 67 46 chr10 40741987 40742704 -99574061 - L1MC4a LINE L1 -5262 1134 362 1475 268 94 13 chr10 40742704 40743246 -99573519 + L1M4b LINE L1 347 932 -5927 2145 236 67 13 chr10 40743364 40743922 -99572843 + L1M4b LINE L1 936 1462 -5393 2182 117 13 0 chr10 40743922 40744221 -99572544 + AluSx SINE Alu 1 303 -9 2145 236 67 13 chr10 40744221 40744380 -99572385 + L1M4b LINE L1 1462 1611 -5244 2213 121 0 6 chr10 40744380 40744695 -99572070 + AluSq SINE Alu 1 313 0 2145 236 67 13 chr10 40744695 40744913 -99571852 + L1M4b LINE L1 1611 1901 -4954 449 198 42 0 chr10 40744915 40745011 -99571754 + U6 snRNA snRNA 2 101 -6 460 233 27 20 chr10 40745056 40745202 -99571563 + L1M4b LINE L1 2029 2175 -4784 187 296 111 25 chr10 40745289 40745370 -99571395 - MIR SINE MIR -97 165 78 2391 47 3 0 chr10 40745382 40745680 -99571085 - L1PA4 LINE L1 -3 6152 5854 336 328 85 10 chr10 40745742 40746037 -99570728 + L1M4b LINE L1 2265 2683 -4455 1603 195 17 23 chr10 40746037 40746339 -99570426 + AluJb SINE Alu 1 300 -12 231 222 0 0 chr10 40746348 40746402 -99570363 + A-rich Low_complexity Low_complexity 1 54 0 2112 106 27 3 chr10 40746408 40746700 -99570065 + AluSx SINE Alu 1 299 -13 584 238 59 111 chr10 40746724 40746866 -99569899 + L1MEc LINE L1 1731 1879 -4336 907 136 90 7 chr10 40746866 40747021 -99569744 + L1PA8A LINE L1 5946 6113 -18 180 0 0 0 chr10 40747028 40747048 -99569717 + (CAA)n Simple_repeat Simple_repeat 2 21 0 584 238 59 111 chr10 40747048 40747079 -99569686 + L1MEc LINE L1 1885 1916 -4299 1264 138 47 30 chr10 40747079 40747311 -99569454 - MER46A DNA MER2_type 0 236 1 584 238 59 111 chr10 40747311 40747551 -99569214 + L1MEc LINE L1 1916 2095 -4120 930 191 80 0 chr10 40747567 40747766 -99568999 + L1PB4 LINE L1 5942 6156 0 299 185 15 15 chr10 40747868 40747933 -99568832 - Tigger5 DNA MER2_type 0 2323 2259 288 218 0 0 chr10 40748035 40748090 -99568675 - Tigger5 DNA MER2_type -2268 55 1 5345 252 84 31 chr10 40748167 40749367 -99567398 + L1MEc LINE L1 2276 3412 -2803 1900 156 7 16 chr10 40749367 40749675 -99567090 + AluJb SINE Alu 5 309 -3 5345 252 84 31 chr10 40749675 40750488 -99566277 + L1MEc LINE L1 3412 4181 -2034 1464 156 120 18 chr10 40750488 40750764 -99566001 + AluSg SINE Alu 1 304 -6 5345 252 84 31 chr10 40750764 40751266 -99565499 + L1MEc LINE L1 4181 4655 -1560 2057 133 13 7 chr10 40751266 40751568 -99565197 + AluSg SINE Alu 1 304 -6 5345 252 84 31 chr10 40751568 40751990 -99564775 + L1MEc LINE L1 4655 5407 -808 1929 256 91 40 chr10 40751984 40752429 -99564336 - L1M4 LINE L1 -1820 5137 4716 * 2019 145 10 3 chr10 40752429 40752732 -99564033 - AluSx SINE Alu -7 305 1 1929 256 91 40 chr10 40752732 40753184 -99563581 - L1M4 LINE L1 -2241 4716 4194 2397 169 73 60 chr10 40753224 40753472 -99563293 + L1MC3 LINE L1 6202 6445 -1340 2134 145 0 0 chr10 40753472 40753782 -99562983 + AluSx SINE Alu 1 310 -2 2397 169 73 60 chr10 40753782 40754186 -99562579 + L1MC3 LINE L1 6445 6863 -922 2609 184 53 8 chr10 40754201 40754799 -99561966 + L1MC3 LINE L1 7124 7748 -37 2750 217 28 45 chr10 40754827 40754879 -99561886 + L1MB8 LINE L1 5352 5403 -775 2213 104 0 3 chr10 40754879 40755178 -99561587 + AluSg1 SINE Alu 1 298 -11 2750 217 28 45 chr10 40755178 40755842 -99560923 + L1MB8 LINE L1 5403 6077 -101 2154 111 3 3 chr10 40755842 40756131 -99560634 + AluSx SINE Alu 1 289 -23 1671 108 62 88 chr10 40756139 40756446 -99560319 + AluSx SINE Alu 1 299 -13 2750 217 28 45 chr10 40756446 40756547 -99560218 + L1MB8 LINE L1 6084 6165 -13 2114 93 4 4 chr10 40756903 40757207 -99559558 - AluSc SINE Alu 0 304 1 1421 194 88 38 chr10 40757265 40757290 -99559475 - L1MD2 LINE L1 -12 6347 6325 2231 135 0 0 chr10 40757290 40757602 -99559163 - AluJb SINE Alu 0 312 1 1421 194 88 38 chr10 40757602 40757999 -99558766 - L1MD2 LINE L1 -34 6325 5904 962 264 81 25 chr10 40757999 40758396 -99558369 + LTR52 LTR ERVL 1 419 -2 1416 223 73 8 chr10 40758397 40758796 -99557969 - L1MD2 LINE L1 -453 5906 5482 568 251 76 4 chr10 40758835 40759086 -99557679 - L1M4 LINE L1 -4946 2013 1745 276 162 27 14 chr10 40759154 40759228 -99557537 - L1M4 LINE L1 -5412 1447 1373 305 261 114 23 chr10 40759271 40759447 -99557318 + L1MB4 LINE L1 15 206 -6336 1315 250 25 35 chr10 40759447 40760123 -99556642 + L1MB4 LINE L1 1764 2445 -4199 2064 143 0 13 chr10 40760123 40760437 -99556328 + AluSx SINE Alu 3 312 0 1315 250 25 35 chr10 40760437 40760586 -99556179 + L1MB4 LINE L1 2445 2594 -4050 222 0 79 0 chr10 40760586 40760624 -99556141 + T-rich Low_complexity Low_complexity 1 41 0 1569 159 50 4 chr10 40760624 40760882 -99555883 - AluJo SINE Alu -32 280 11 1315 250 25 35 chr10 40760882 40761241 -99555524 + L1MB4 LINE L1 2592 3043 -3601 1213 189 67 42 chr10 40761243 40761528 -99555237 + AluJb SINE Alu 1 292 -20 204 40 0 0 chr10 40761538 40761563 -99555202 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 760 213 45 5 chr10 40761717 40761919 -99554846 + L1MB4 LINE L1 5194 5403 -1241 508 240 39 7 chr10 40761932 40762086 -99554679 + L1MB5 LINE L1 5897 6055 -119 321 198 110 0 chr10 40762160 40762251 -99554514 + L1MB4 LINE L1 5528 5628 -1016 2157 108 18 0 chr10 40762260 40762546 -99554219 + AluSx SINE Alu 1 291 -21 198 0 0 0 chr10 40762547 40762569 -99554196 + (TCTA)n Simple_repeat Simple_repeat 1 22 0 1711 218 138 7 chr10 40762576 40763113 -99553652 + L1MB4 LINE L1 6070 6676 -2 4850 235 84 63 chr10 40763128 40763195 -99553570 - L1MDa LINE L1 -1222 5318 5254 1312 189 51 61 chr10 40763195 40763570 -99553195 - MLT1A2 LTR MaLR 0 374 4 4850 235 84 63 chr10 40763570 40763694 -99553071 - L1MDa LINE L1 -1286 5254 5134 2726 179 62 2 chr10 40763694 40764213 -99552552 - MER44D DNA MER2_type 0 605 1 4850 235 84 63 chr10 40764213 40764708 -99552057 - L1MDa LINE L1 -1406 5134 4651 2269 105 23 0 chr10 40764708 40765013 -99551752 - AluSp SINE Alu -1 312 1 4850 235 84 63 chr10 40765013 40765646 -99551119 - L1MDa LINE L1 -1889 4651 4033 2104 127 0 7 chr10 40765646 40765945 -99550820 + AluSg SINE Alu 1 297 -13 4850 235 84 63 chr10 40765945 40766211 -99550554 - L1MDa LINE L1 -2507 4033 3774 2189 128 0 3 chr10 40766211 40766515 -99550250 - AluSx SINE Alu -9 303 1 4850 235 84 63 chr10 40766515 40767235 -99549530 - L1MDa LINE L1 -2766 3774 2944 1534 154 30 0 chr10 40767235 40767468 -99549297 - AluSg SINE Alu -9 301 62 4850 235 84 63 chr10 40767468 40767777 -99548988 - L1MDa LINE L1 -3596 2944 2643 696 186 6 25 chr10 40767808 40767969 -99548796 + L1M1 LINE L1 19 176 -7389 4003 111 82 20 chr10 40767969 40768660 -99548105 + L1MA2 LINE L1 5571 6304 0 845 211 223 0 chr10 40768664 40769014 -99547751 - L1MDa LINE L1 -3921 2619 2192 1161 221 112 5 chr10 40769019 40769403 -99547362 - L1MDa LINE L1 -4384 2156 1732 3785 42 0 0 chr10 40769406 40769918 -99546847 + L1PA4 LINE L1 5657 6168 0 518 216 132 25 chr10 40769951 40770155 -99546610 - L1MDa LINE L1 -4819 1721 1496 658 327 106 6 chr10 40770170 40770717 -99546048 + L2 LINE L2 2541 3149 -164 189 74 0 0 chr10 40770720 40770747 -99546018 + (CATATA)n Simple_repeat Simple_repeat 2 28 0 2049 133 23 0 chr10 40770769 40771071 -99545694 - AluSx SINE Alu -3 309 1 1897 114 0 52 chr10 40773269 40773577 -99543188 + AluSq SINE Alu 1 292 -21 1982 124 43 7 chr10 40773715 40773997 -99542768 + AluSq SINE Alu 1 292 -21 298 287 195 0 chr10 40774004 40774352 -99542413 + L1M4 LINE L1 4557 4972 -1174 416 219 26 123 chr10 40774508 40774554 -99542211 - MER58B DNA MER1_type -2080 340 291 2018 120 37 0 chr10 40774554 40774854 -99541911 + AluSx SINE Alu 1 311 -1 416 219 26 123 chr10 40774854 40774962 -99541803 - MER58B DNA MER1_type -2129 291 201 1780 98 7 102 chr10 40775160 40775465 -99541300 + AluSg SINE Alu 27 302 -8 2319 95 0 0 chr10 40775481 40775775 -99540990 + AluSc SINE Alu 1 294 -15 2110 136 0 0 chr10 40776158 40776468 -99540297 + AluSx SINE Alu 1 310 -2 200 254 183 14 chr10 40777154 40777225 -99539540 + MIR SINE MIR 21 103 -105 2221 81 34 0 chr10 40777292 40777587 -99539178 - AluSq SINE Alu -8 305 1 1627 156 28 21 chr10 40779228 40779516 -99537249 + AluJb SINE Alu 1 290 -22 2280 106 0 3 chr10 40779651 40779954 -99536811 + AluSc SINE Alu 1 302 -7 994 238 48 18 chr10 40780001 40780352 -99536413 - L1ME1 LINE L1 -1 6165 5809 1705 204 137 20 chr10 40780352 40780842 -99535923 - LTR10B LTR ERV1 0 547 1 297 265 20 0 chr10 40780842 40780944 -99535821 - L1ME1 LINE L1 -2230 5812 5709 1946 183 96 30 chr10 40781034 40781503 -99535262 - MLT2B1 LTR ERVL 0 520 21 2392 97 0 3 chr10 40781514 40781824 -99534941 - AluSp SINE Alu -4 309 1 4486 163 15 34 chr10 40781908 40782954 -99533811 - L1MA5 LINE L1 0 6300 5236 1778 170 3 0 chr10 40782954 40783263 -99533502 - AluJb SINE Alu 0 310 1 1865 131 77 0 chr10 40783272 40783438 -99533327 - AluSc SINE Alu -14 295 98 351 0 0 0 chr10 40783438 40783477 -99533288 + (TG)n Simple_repeat Simple_repeat 2 40 0 1865 131 77 0 chr10 40783477 40783584 -99533181 - AluSc SINE Alu -211 98 1 2037 114 4 4 chr10 40783594 40783912 -99532853 - AluY SINE Alu 0 318 1 4486 163 15 34 chr10 40783912 40784164 -99532601 - L1MA5 LINE L1 -1081 5219 4869 26 30 0 0 chr10 40784215 40784248 -99532517 + AT_rich Low_complexity Low_complexity 1 33 0 517 290 147 13 chr10 40784272 40784586 -99532179 - LTR50 LTR ERVL -3 792 437 593 160 50 8 chr10 40784731 40784850 -99531915 + L1MB7 LINE L1 6041 6164 -20 671 86 0 0 chr10 40784862 40784943 -99531822 - AluSc SINE Alu -16 293 213 638 235 51 77 chr10 40785032 40785464 -99531301 + LTR15 LTR ERV1 112 493 0 1478 175 38 55 chr10 40785466 40785866 -99530899 + HERV15 LTR ERV1 3 395 -8340 213 94 0 0 chr10 40786041 40786073 -99530692 + (TG)n Simple_repeat Simple_repeat 2 33 0 587 190 37 188 chr10 40786105 40786426 -99530339 - MLT2B1 LTR ERVL -40 374 100 2363 200 30 2 chr10 40786506 40786966 -99529799 - L1PB4 LINE L1 0 6156 5684 1774 173 0 0 chr10 40786967 40787256 -99529509 - AluJo SINE Alu -12 300 12 1191 136 0 0 chr10 40787258 40787435 -99529330 - AluSg/x SINE Alu -15 295 119 42708 38 24 4 chr10 40787438 40793446 -99523319 - L1PA2 LINE L1 -15 6140 3 418 103 162 0 chr10 40793462 40793530 -99523235 - AluY SINE Alu -179 132 54 1175 149 0 16 chr10 40793531 40793719 -99523046 - AluSg SINE Alu -125 185 1 993 117 94 103 chr10 40793720 40793916 -99522849 - L1PB4 LINE L1 -476 5680 5485 855 99 0 0 chr10 40793916 40794027 -99522738 - HY1 scRNA scRNA -1 111 1 993 117 94 103 chr10 40794027 40794053 -99522712 - L1PB4 LINE L1 -671 5485 5460 520 168 196 0 chr10 40794054 40794161 -99522604 - MLT2B2 LTR ERVL -387 128 1 243 277 119 10 chr10 40794167 40794268 -99522497 - MIR SINE MIR -57 151 40 876 242 64 64 chr10 40795079 40795370 -99521395 + L1MEc LINE L1 36 329 -6067 1914 166 3 3 chr10 40795370 40795678 -99521087 + AluSx SINE Alu 1 308 -4 876 242 64 64 chr10 40795678 40795745 -99521020 + L1MEc LINE L1 328 394 -6002 1791 179 67 8 chr10 40796766 40797124 -99519641 + MLT1B LTR MaLR 1 379 -11 1574 80 0 10 chr10 40797172 40797371 -99519394 + MER107 DNA MER1_type 1 197 0 1640 164 30 23 chr10 40797448 40797589 -99519176 + AluJb SINE Alu 1 140 -172 2015 124 21 3 chr10 40797589 40797880 -99518885 + AluSx SINE Alu 1 296 -16 1640 164 30 23 chr10 40797880 40798042 -99518723 + AluJb SINE Alu 140 306 -6 21 0 0 0 chr10 40798345 40798366 -99518399 + AT_rich Low_complexity Low_complexity 1 21 0 2164 108 3 0 chr10 40798369 40798679 -99518086 + AluSp SINE Alu 1 311 0 1293 214 51 11 chr10 40798792 40799067 -99517698 - AluJo SINE Alu -26 286 1 2230 111 3 0 chr10 40799724 40800022 -99516743 + AluSp SINE Alu 1 299 -14 317 280 75 0 chr10 40800034 40800141 -99516624 - L1M4b LINE L1 -6737 122 8 1800 134 47 30 chr10 40800145 40800443 -99516322 - AluSx SINE Alu -9 303 1 2306 108 13 0 chr10 40800459 40800765 -99516000 - AluSg SINE Alu 0 310 1 497 206 10 0 chr10 40800768 40800870 -99515895 - L1MEc LINE L1 -1980 4235 4133 1113 90 0 0 chr10 40800872 40801006 -99515759 - AluSq/x SINE Alu -179 134 1 1455 188 43 190 chr10 40801012 40801043 -99515722 - L1MEc LINE L1 -2814 3401 3367 2334 108 0 0 chr10 40801043 40801348 -99515417 - AluSg SINE Alu 0 310 6 1455 188 43 190 chr10 40801348 40801747 -99515018 - L1MEc LINE L1 -2848 3367 2911 1948 140 7 3 chr10 40801747 40802039 -99514726 - AluSg SINE Alu -17 293 1 1455 188 43 190 chr10 40802039 40802076 -99514689 - L1MEc LINE L1 -3304 2911 2870 1446 197 44 7 chr10 40802076 40802371 -99514394 + AluJo SINE Alu 5 310 -2 1455 188 43 190 chr10 40802371 40802708 -99514057 - L1MEc LINE L1 -3345 2870 2753 2166 124 3 3 chr10 40802708 40803014 -99513751 - AluSp SINE Alu -7 306 1 1455 188 43 190 chr10 40803014 40803157 -99513608 - L1MEc LINE L1 -3462 2753 2591 4101 222 75 38 chr10 40803189 40803510 -99513255 - L1MEc LINE L1 -5058 1338 1030 2223 119 0 0 chr10 40803510 40803805 -99512960 + AluSg SINE Alu 1 295 -15 4101 222 75 38 chr10 40803805 40803993 -99512772 - L1MEc LINE L1 -5366 1030 851 2138 112 10 0 chr10 40803993 40804287 -99512478 - AluSx SINE Alu -15 297 1 4101 222 75 38 chr10 40804287 40805027 -99511738 - L1MEc LINE L1 -5545 851 41 739 181 0 0 chr10 40805027 40805154 -99511611 - AluSg/x SINE Alu -4 308 182 5203 55 132 169 chr10 40805176 40805673 -99511092 + MER11A LTR ERVK 1 515 -751 1306 14 0 0 chr10 40805673 40805817 -99510948 - AluYb8 SINE Alu -3 315 172 5203 55 132 169 chr10 40805817 40806392 -99510373 + MER11A LTR ERVK 515 1265 -1 1070 131 0 0 chr10 40806392 40806537 -99510228 - AluSq/x SINE Alu -168 145 1 1094 216 14 106 chr10 40806547 40806602 -99510163 + L1MC4 LINE L1 7655 7713 -329 1923 145 0 26 chr10 40806602 40806906 -99509859 + AluSc SINE Alu 1 296 -13 1094 216 14 106 chr10 40806906 40807208 -99509557 + L1MC4 LINE L1 7713 7971 -71 1934 146 43 0 chr10 40807208 40807489 -99509276 - AluSg SINE Alu -17 293 1 1094 216 14 106 chr10 40807489 40807547 -99509218 + L1MC4 LINE L1 7971 8033 -9 1980 138 3 10 chr10 40807547 40807845 -99508920 + AluSx SINE Alu 1 296 -16 2293 109 0 3 chr10 40807929 40808231 -99508534 + AluSq SINE Alu 1 301 -12 236 263 53 96 chr10 40808233 40808442 -99508323 + L1ME3A LINE L1 5963 6162 -8 403 118 108 49 chr10 40808743 40808845 -99507920 - MER54A LTR ERVL -786 115 8 2185 111 0 0 chr10 40808985 40809274 -99507491 - AluSc SINE Alu -20 289 1 4798 137 27 21 chr10 40809313 40810087 -99506678 - MER4E LTR ERV1 0 779 1 3128 183 52 23 chr10 40810222 40810250 -99506515 + MER67C LTR ERV1 3 29 -681 2169 114 0 10 chr10 40810250 40810548 -99506217 + AluSg1 SINE Alu 1 295 -14 3128 183 52 23 chr10 40810548 40811207 -99505558 + MER67C LTR ERV1 29 710 0 222 297 16 0 chr10 40811226 40811290 -99505475 + (TATG)n Simple_repeat Simple_repeat 1 65 0 1661 186 62 3 chr10 40811385 40811708 -99505057 + MER2 DNA MER2_type 2 343 -1 307 216 93 174 chr10 40812270 40812604 -99504161 - L1M2 LINE L1 -5835 1014 708 6403 148 26 9 chr10 40813491 40815277 -99501488 - L1MA4 LINE L1 -3 6297 4543 1677 151 79 11 chr10 40815277 40815556 -99501209 - AluSx SINE Alu -14 298 1 6403 148 26 9 chr10 40815556 40815706 -99501059 - L1MA4 LINE L1 -1757 4543 4397 2261 101 3 3 chr10 40815706 40816004 -99500761 - AluSp SINE Alu -15 298 1 6403 148 26 9 chr10 40816004 40816187 -99500578 - L1MA4 LINE L1 -1903 4397 4146 323 205 79 39 chr10 40816737 40816864 -99499901 - L1ME4a LINE L1 -274 5847 5716 387 0 0 0 chr10 40817216 40817259 -99499506 + (TG)n Simple_repeat Simple_repeat 2 44 0 629 308 70 0 chr10 40817352 40817537 -99499228 + Charlie1a DNA MER1_type 1 198 -1257 2228 110 3 3 chr10 40817557 40817856 -99498909 - AluSx SINE Alu -13 299 1 22 0 0 0 chr10 40817865 40817887 -99498878 + AT_rich Low_complexity Low_complexity 1 22 0 500 332 105 9 chr10 40817988 40818253 -99498512 - L2 LINE L2 -250 3063 2777 207 0 0 0 chr10 40818255 40818278 -99498487 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1597 236 19 3 chr10 40818329 40818702 -99498063 - L1M4 LINE L1 -2070 4076 3698 662 254 90 11 chr10 40818708 40818897 -99497868 + MER63A DNA MER1_type 7 210 0 542 299 10 10 chr10 40818897 40819104 -99497661 - L1M4 LINE L1 -2448 3698 3492 3981 174 51 20 chr10 40819106 40819890 -99496875 - L1MB5 LINE L1 -1 6409 5602 1125 229 87 0 chr10 40819926 40820144 -99496621 + MER8 DNA MER2_type 3 239 0 3014 223 71 19 chr10 40820146 40820235 -99496530 - L1MB5 LINE L1 -788 5594 5511 2258 111 3 0 chr10 40820235 40820532 -99496233 + AluSx SINE Alu 1 298 -14 1995 139 0 0 chr10 40820534 40820815 -99495950 + AluSg SINE Alu 1 281 -29 3014 223 71 19 chr10 40820815 40821182 -99495583 - L1MB5 LINE L1 -871 5511 5164 1660 180 44 3 chr10 40821182 40821476 -99495289 + AluJb SINE Alu 1 306 -6 3014 223 71 19 chr10 40821476 40821844 -99494921 - L1MB5 LINE L1 -1218 5164 4723 1493 240 62 24 chr10 40821828 40822110 -99494655 - L1MB5 LINE L1 -3793 2589 2319 * 2259 121 131 31 chr10 40822110 40822457 -99494308 + MSTA LTR MaLR 1 392 -36 2059 118 20 10 chr10 40822457 40822753 -99494012 - AluSx SINE Alu -13 299 1 2259 121 131 31 chr10 40822753 40822793 -99493972 + MSTA LTR MaLR 392 427 -1 1493 240 62 24 chr10 40822793 40823463 -99493302 - L1MB5 LINE L1 -4063 2319 1515 6681 183 29 1 chr10 40823477 40824647 -99492118 - MSTB-int LTR MaLR -446 1205 3 2873 142 9 34 chr10 40824647 40824889 -99491876 - MSTB LTR MaLR 0 426 198 2152 137 0 0 chr10 40824889 40825195 -99491570 - AluSx SINE Alu -4 308 3 2873 142 9 34 chr10 40825195 40825389 -99491376 - MSTB LTR MaLR -228 198 1 1976 137 3 26 chr10 40825468 40825798 -99490967 + AluSx SINE Alu 1 312 0 314 267 17 35 chr10 40825829 40825945 -99490820 - L1MB5 LINE L1 -6248 136 23 779 259 29 38 chr10 40825950 40826266 -99490499 - L1M4 LINE L1 -2636 3510 3198 419 250 72 0 chr10 40826310 40826462 -99490303 - L1M4 LINE L1 -3283 2863 2701 2182 96 3 26 chr10 40826633 40826935 -99489830 - AluSg SINE Alu -15 295 1 2384 88 3 3 chr10 40826945 40827250 -99489515 - AluSp SINE Alu -8 305 1 355 273 85 12 chr10 40827362 40827527 -99489238 - HAL1 LINE L1 -856 1651 1475 2412 75 0 31 chr10 40828238 40828557 -99488208 - AluY SINE Alu -2 309 1 1348 106 0 0 chr10 40828799 40828978 -99487787 + AluY SINE Alu 124 302 -9 2320 99 0 0 chr10 40828980 40829284 -99487481 + AluSx SINE Alu 1 304 -8 242 156 22 0 chr10 40829284 40829329 -99487436 + HAL1b LINE L1 492 537 -811 232 311 0 0 chr10 40829321 40829395 -99487370 + L1M4 LINE L1 2944 3017 -3129 * 21 0 0 31 chr10 40829821 40829836 -99486929 + AT_rich Low_complexity Low_complexity 1 15 -16 1982 139 0 3 chr10 40829836 40830124 -99486641 - AluSx SINE Alu -25 287 1 21 0 0 31 chr10 40830124 40830140 -99486625 + AT_rich Low_complexity Low_complexity 15 31 0 487 200 0 11 chr10 40830158 40830248 -99486517 - AluSg/x SINE Alu -83 226 138 331 303 84 26 chr10 40830702 40830773 -99485992 + L2 LINE L2 3146 3211 -102 2034 161 52 3 chr10 40830773 40831102 -99485663 - MER7A DNA MER2_type -1 345 3 331 303 84 26 chr10 40831102 40831185 -99485580 + L2 LINE L2 3211 3309 -4 2297 100 7 0 chr10 40831955 40832255 -99484510 - AluSp SINE Alu -11 302 1 369 283 0 0 chr10 40832797 40832889 -99483876 + L2 LINE L2 3222 3313 0 1965 124 13 23 chr10 40832907 40833213 -99483552 + AluSx SINE Alu 1 303 -9 2184 122 0 0 chr10 40833723 40834018 -99482747 - AluSx SINE Alu -17 295 1 639 240 173 18 chr10 40838055 40838280 -99478485 + MIR SINE MIR 2 261 -1 1222 204 104 36 chr10 40838440 40838749 -99478016 + MER58B DNA MER1_type 1 330 -11 1808 160 0 27 chr10 40839325 40839625 -99477140 - AluJb SINE Alu -16 296 5 22 0 0 0 chr10 40839938 40839960 -99476805 + AT_rich Low_complexity Low_complexity 1 22 0 1520 161 56 0 chr10 40840022 40840271 -99476494 + AluSx SINE Alu 5 267 -45 375 270 132 17 chr10 40840770 40841147 -99475618 + MLT1H LTR MaLR 32 521 -34 1951 150 6 22 chr10 40841329 40841468 -99475297 + AluSq SINE Alu 1 141 -172 2118 105 14 7 chr10 40841468 40841763 -99475002 + AluSg SINE Alu 1 297 -13 1951 150 6 22 chr10 40841763 40841936 -99474829 + AluSq SINE Alu 141 308 -5 2260 119 0 0 chr10 40842320 40842623 -99474142 - AluSc SINE Alu -5 304 2 2340 87 3 7 chr10 40842624 40842923 -99473842 - AluSg SINE Alu -12 298 1 2004 138 7 7 chr10 40843102 40843398 -99473367 + AluSx SINE Alu 1 296 -16 232 275 0 29 chr10 40843478 40843547 -99473218 + MER88 LTR ERVL 87 153 -311 * 1666 204 101 28 chr10 40843488 40843953 -99472812 - MER74B LTR ERVL -77 545 47 2079 146 0 0 chr10 40844069 40844364 -99472401 + AluSx SINE Alu 1 295 -17 1476 227 0 0 chr10 40844618 40844895 -99471870 + HERVS71 LTR ERV1 7972 8248 -730 464 155 36 12 chr10 40844913 40844997 -99471768 - LTR6A LTR ERV1 -478 86 1 29521 186 5 2 chr10 40844997 40850137 -99466628 - HERVS71 LTR ERV1 -69 8909 3721 14393 217 31 14 chr10 40850144 40853558 -99463207 - HERVS71 LTR ERV1 -5381 3597 4 2401 175 26 36 chr10 40853560 40854063 -99462702 - LTR6B LTR ERV1 0 558 61 734 352 38 14 chr10 40854654 40855077 -99461688 + ERVL LTR ERVL 2644 3076 -2688 1627 140 83 88 chr10 40855445 40855649 -99461116 + L1MA8 LINE L1 5857 6060 -231 1788 92 135 11 chr10 40855649 40855909 -99460856 + AluSg1 SINE Alu 1 292 -17 1627 140 83 88 chr10 40855909 40856112 -99460653 + L1MA8 LINE L1 6060 6262 -29 238 217 0 0 chr10 40856105 40856151 -99460614 - L1MC4 LINE L1 -1341 6701 6656 * 303 102 0 0 chr10 40856141 40856190 -99460575 + L1MA8 LINE L1 6221 6269 -22 1689 179 14 0 chr10 40856190 40856475 -99460290 + AluJb SINE Alu 1 289 -23 2162 116 0 7 chr10 40856481 40856774 -99459991 + AluSp SINE Alu 1 291 -22 2230 118 3 0 chr10 40856786 40857082 -99459683 + AluSq SINE Alu 1 297 -16 1636 185 10 13 chr10 40857091 40857394 -99459371 + AluSx SINE Alu 6 307 -5 2375 104 57 28 chr10 40857424 40857778 -99458987 + THE1B LTR MaLR 1 364 0 973 336 111 32 chr10 40857822 40858688 -99458077 + ERVL LTR ERVL 3572 4505 -1259 1619 171 79 0 chr10 40858819 40859111 -99457654 + MLT1A1 LTR MaLR 49 363 -2 721 160 33 73 chr10 40859185 40859335 -99457430 - AluJo SINE Alu -87 225 82 2415 94 0 0 chr10 40859598 40859895 -99456870 + AluY SINE Alu 1 297 -14 2578 145 14 11 chr10 40859907 40860348 -99456417 + L1MB7 LINE L1 5694 6135 -49 491 257 46 0 chr10 40860376 40860485 -99456280 - MER81 DNA DNA 0 114 1 495 271 93 16 chr10 40860540 40860798 -99455967 + L1MEc LINE L1 980 1224 -4981 824 272 51 12 chr10 40860892 40861223 -99455542 + L1MEc LINE L1 1543 1886 -4510 251 270 130 0 chr10 40861227 40861342 -99455423 - L1M4 LINE L1 -3160 2986 2857 2282 104 0 3 chr10 40861361 40861660 -99455105 - AluSq SINE Alu -14 299 2 4269 164 25 13 chr10 40861746 40861793 -99454972 - L1MB1 LINE L1 0 6168 6123 2359 85 3 0 chr10 40861793 40862088 -99454677 - AluSg SINE Alu -14 296 1 4269 164 25 13 chr10 40862088 40862277 -99454488 - L1MB1 LINE L1 -45 6123 5938 885 170 110 60 chr10 40862277 40862477 -99454288 + MER6B DNA MER2_type 1 210 0 4269 164 25 13 chr10 40862477 40863007 -99453758 - L1MB1 LINE L1 -230 5938 5392 2360 233 106 7 chr10 40863006 40863707 -99453058 - L1M4 LINE L1 -3267 2879 2110 * 2875 150 35 33 chr10 40863708 40863838 -99452927 - L1PA15 LINE L1 -3 6162 6034 2247 115 0 3 chr10 40863838 40864142 -99452623 - AluSx SINE Alu -8 304 2 2875 150 35 33 chr10 40864142 40864530 -99452235 - L1PA15 LINE L1 -131 6034 5643 1828 68 25 0 chr10 40864530 40864746 -99452019 - L1MA1 LINE L1 -1 6301 6059 2190 114 0 3 chr10 40864747 40865044 -99451721 - AluSg SINE Alu -14 296 1 6427 176 14 5 chr10 40865048 40865680 -99451085 - L1MB1 LINE L1 -880 5266 4618 2324 100 7 0 chr10 40865680 40865990 -99450775 - AluSx SINE Alu 0 312 1 6427 176 14 5 chr10 40865990 40866531 -99450234 - L1MB1 LINE L1 -1528 4618 4083 4173 158 60 15 chr10 40866517 40867721 -99449044 - L1P4 LINE L1 -477 5688 4410 * 2068 107 4 7 chr10 40867721 40868034 -99448731 - AluSg SINE Alu 0 312 1 4173 158 60 15 chr10 40868034 40868097 -99448668 - L1P4 LINE L1 -1755 4410 4351 1997 130 58 0 chr10 40868130 40868422 -99448343 - AluSx SINE Alu -3 309 1 1544 159 41 12 chr10 40868426 40868793 -99447972 - L1MC/D LINE L1 -743 5821 5612 622 203 27 59 chr10 40868827 40868933 -99447832 - L1MC/D LINE L1 -4205 2359 2260 2989 83 11 5 chr10 40868933 40869306 -99447459 + THE1C LTR MaLR 1 375 0 622 203 27 59 chr10 40869306 40869386 -99447379 - L1MC/D LINE L1 -4304 2260 2179 2973 186 104 42 chr10 40869397 40870456 -99446309 - L1MCa LINE L1 -4455 2109 894 1113 216 50 11 chr10 40870518 40870801 -99445964 - L1MCa LINE L1 -5162 883 590 437 113 0 0 chr10 40870793 40870855 -99445910 + L1MB7 LINE L1 5558 5619 -561 * 2239 159 151 75 chr10 40870875 40870902 -99445863 + LTR25 LTR ERV1 38 62 -732 2163 118 0 10 chr10 40870902 40871206 -99445559 - AluSx SINE Alu -11 301 1 2239 159 151 75 chr10 40871206 40871839 -99444926 + LTR25 LTR ERV1 62 794 0 1585 214 69 18 chr10 40871857 40872250 -99444515 + L1MB7 LINE L1 5617 6029 -155 752 183 73 74 chr10 40872244 40872283 -99444482 + L1MC3 LINE L1 7541 7579 -463 * 1639 181 24 7 chr10 40872283 40872575 -99444190 - AluJb SINE Alu -15 297 1 752 183 73 74 chr10 40872575 40872761 -99444004 + L1MC3 LINE L1 7579 8035 -7 2017 138 0 24 chr10 40872998 40873296 -99443469 + AluSx SINE Alu 1 291 -21 896 247 112 55 chr10 40873321 40873738 -99443027 + L1MEc LINE L1 1439 1831 -4565 1905 93 90 0 chr10 40873738 40874006 -99442759 + AluSc SINE Alu 1 292 -17 896 247 112 55 chr10 40874006 40874077 -99442688 + L1MEc LINE L1 1831 1897 -4499 2270 97 0 13 chr10 40874077 40874375 -99442390 + AluSx SINE Alu 1 294 -18 896 247 112 55 chr10 40874375 40874629 -99442136 + L1MEc LINE L1 1897 2224 -4172 * 2121 217 91 7 chr10 40874605 40875483 -99441282 + L1MDb LINE L1 4 1073 -5333 2122 106 0 3 chr10 40875483 40875765 -99441000 + AluSx SINE Alu 1 281 -31 2121 217 91 7 chr10 40875765 40875794 -99440971 + L1MDb LINE L1 1073 1098 -5308 1558 222 45 26 chr10 40875807 40876185 -99440580 + L1MA9 LINE L1 3 387 -6781 4292 196 45 19 chr10 40876193 40877005 -99439760 + L1MA9 LINE L1 5813 6678 -655 2207 100 24 0 chr10 40877005 40877296 -99439469 + AluSp SINE Alu 1 298 -15 4292 196 45 19 chr10 40877296 40877925 -99438840 + L1MA9 LINE L1 6678 7289 -44 2232 178 52 24 chr10 40877925 40878346 -99438419 + Tigger2a DNA MER2_type 1 433 -1 5070 137 33 35 chr10 40878346 40878606 -99438159 + Tigger3b DNA MER2_type 322 581 -2447 1776 156 17 13 chr10 40878606 40878907 -99437858 + AluJb SINE Alu 1 302 -10 5070 137 33 35 chr10 40878907 40879043 -99437722 + Tigger3b DNA MER2_type 581 716 -2312 2175 117 7 0 chr10 40879043 40879341 -99437424 + AluSq SINE Alu 1 300 -13 5070 137 33 35 chr10 40879341 40879854 -99436911 + Tigger3b DNA MER2_type 716 1230 -1 1817 230 66 78 chr10 40879855 40880299 -99436466 + L1ME2 LINE L1 4228 4676 -1470 2269 105 0 0 chr10 40880299 40880594 -99436171 + AluSx SINE Alu 2 296 -16 1817 230 66 78 chr10 40880594 40880710 -99436055 + L1ME2 LINE L1 4676 4792 -1354 2159 138 14 46 chr10 40880710 40881058 -99435707 - MER1B DNA MER1_type 0 337 1 1817 230 66 78 chr10 40881058 40881282 -99435483 + L1ME2 LINE L1 4792 5004 -1142 1034 150 0 6 chr10 40881419 40881579 -99435186 + AluSp SINE Alu 150 308 -5 2212 228 65 66 chr10 40881599 40882047 -99434718 + L1ME2 LINE L1 5258 5705 -459 1987 170 66 47 chr10 40882047 40882471 -99434294 - MSTB1 LTR MaLR 0 432 1 2212 228 65 66 chr10 40882471 40882718 -99434047 + L1ME2 LINE L1 5705 5954 -210 665 140 149 0 chr10 40882718 40882832 -99433933 + FLAM_C SINE Alu 1 131 -2 2212 228 65 66 chr10 40882832 40882934 -99433831 + L1ME2 LINE L1 5954 6055 -109 7332 41 10 5 chr10 40882946 40883828 -99432937 - L1PA6 LINE L1 -6 6148 5262 300 244 47 87 chr10 40883826 40883885 -99432880 + L1ME1 LINE L1 6043 6103 -61 * 1971 152 52 33 chr10 40883885 40884253 -99432512 - THE1C LTR MaLR 0 375 1 300 244 47 87 chr10 40884253 40884320 -99432445 + L1ME1 LINE L1 6103 6164 0 40315 36 24 2 chr10 40885901 40891919 -99424846 - L1PA2 LINE L1 -1 6154 2 38 39 0 0 chr10 40894605 40894657 -99422108 + AT_rich Low_complexity Low_complexity 1 52 0 2306 107 7 0 chr10 40894741 40895051 -99421714 + AluSp SINE Alu 1 312 -1 25 0 0 0 chr10 40895185 40895210 -99421555 + AT_rich Low_complexity Low_complexity 1 25 0 2122 119 3 0 chr10 40895247 40895542 -99421223 - AluSx SINE Alu -16 296 1 2205 108 0 3 chr10 40895542 40895828 -99420937 - AluSx SINE Alu -23 289 5 390 240 0 3 chr10 40897277 40897384 -99419381 + MER2 DNA MER2_type 1 106 -133 614 240 32 0 chr10 40897405 40897559 -99419206 + L1ME LINE L1 838 996 -5427 925 248 131 26 chr10 40897690 40898250 -99418515 + L1ME LINE L1 1860 2667 -4455 1171 189 59 8 chr10 40898256 40898494 -99418271 + AluJb SINE Alu 54 303 -9 376 232 16 24 chr10 40898532 40898657 -99418108 + L1ME LINE L1 2693 2816 -4306 498 78 0 165 chr10 40898661 40898764 -99418001 - Tigger4(Zombi) DNA MER2_type 0 2731 2646 1992 127 132 5 chr10 40898801 40899172 -99417593 + MSTA LTR MaLR 1 418 -10 1229 137 49 0 chr10 40899212 40899416 -99417349 - Tigger4(Zombi) DNA MER2_type -2517 214 1 488 262 93 16 chr10 40899421 40899604 -99417161 + L1ME LINE L1 2824 3020 -4102 751 127 0 2 chr10 40899609 40899863 -99416902 + AluSx SINE Alu 1 303 -7 649 231 143 23 chr10 40899885 40899925 -99416840 + L1ME LINE L1 2999 3033 -3908 2157 114 7 3 chr10 40899925 40900224 -99416541 + AluSg SINE Alu 1 300 -10 649 231 143 23 chr10 40900224 40900491 -99416274 + L1ME LINE L1 3033 3343 -3598 263 286 95 54 chr10 40900950 40901191 -99415574 - HAL1b LINE L1 -867 481 231 1977 150 7 3 chr10 40901422 40901716 -99415049 - AluSx SINE Alu -17 295 1 2149 292 98 34 chr10 40902861 40903408 -99413357 + L2 LINE L2 1982 2492 -821 2191 117 0 7 chr10 40903408 40903706 -99413059 - AluSx SINE Alu -16 296 1 2149 292 98 34 chr10 40903706 40904380 -99412385 + L2 LINE L2 2492 3282 -31 2274 99 7 3 chr10 40904401 40904704 -99412061 - AluSx SINE Alu -8 304 1 2450 81 3 0 chr10 40905954 40906252 -99410513 - AluSp SINE Alu -14 299 1 406 292 32 5 chr10 40906574 40906759 -99410006 + L1M4 LINE L1 4138 4327 -1819 2258 101 0 3 chr10 40906761 40907059 -99409706 + AluSg SINE Alu 1 297 -13 2895 131 41 6 chr10 40907062 40907572 -99409193 + Tigger3(Golem) DNA MER2_type 2500 3027 -2 1483 230 66 78 chr10 40907573 40908017 -99408748 + L1ME LINE L1 5023 5471 -1470 2272 105 0 0 chr10 40908017 40908312 -99408453 + AluSx SINE Alu 2 296 -16 1483 230 66 78 chr10 40908312 40908428 -99408337 + L1ME LINE L1 5471 5587 -1354 2017 135 14 46 chr10 40908428 40908776 -99407989 - MER1B DNA MER1_type 0 337 1 1483 230 66 78 chr10 40908776 40908998 -99407767 + L1ME LINE L1 5587 5797 -1144 1055 149 0 6 chr10 40909137 40909298 -99407467 + AluSp SINE Alu 150 309 -4 988 244 30 3 chr10 40909318 40909617 -99407148 + L1ME LINE L1 6053 6359 -600 1125 188 10 10 chr10 41009694 41009891 -99306874 - AluJo SINE Alu -115 197 1 836 240 218 3 chr10 41009892 41010263 -99306502 - L1MC4 LINE L1 -1129 6913 6463 606 236 62 25 chr10 41010569 41010811 -99305954 - L1M4 LINE L1 -2406 3740 3490 2050 144 20 0 chr10 41011401 41011699 -99305066 - AluSx SINE Alu -8 304 1 180 0 0 0 chr10 41014715 41014735 -99302030 + (TGG)n Simple_repeat Simple_repeat 1 20 0 1963 174 0 0 chr10 41014735 41015022 -99301743 - AluSx SINE Alu -25 287 1 1449 178 13 80 chr10 41015766 41016080 -99300685 - AluJb SINE Alu -17 295 3 300 242 0 78 chr10 41016184 41016312 -99300453 + L1ME3 LINE L1 5990 6107 -55 468 0 0 0 chr10 41016733 41016785 -99299980 + (CA)n Simple_repeat Simple_repeat 2 53 0 28 29 0 0 chr10 41017786 41017821 -99298944 + AT_rich Low_complexity Low_complexity 1 35 0 391 174 35 0 chr10 41017833 41017919 -99298846 - Charlie7 DNA MER1_type -2473 139 51 1637 148 0 0 chr10 41018401 41018644 -99298121 + AluSx SINE Alu 63 305 -7 2108 115 17 0 chr10 41018744 41019039 -99297726 + AluSq SINE Alu 1 300 -13 187 0 0 158 chr10 41019039 41019185 -99297580 + (CAAGA)n Simple_repeat Simple_repeat 4 126 0 800 76 83 30 chr10 41019419 41019551 -99297214 + MER85 DNA T2_type 1 139 0 538 270 43 33 chr10 41019555 41019766 -99296999 + L1M4 LINE L1 611 823 -5719 255 223 32 21 chr10 41019804 41019898 -99296867 + L1M4 LINE L1 820 914 -5628 767 62 0 0 chr10 41019916 41020012 -99296753 + AluY SINE Alu 202 297 -14 916 207 64 0 chr10 41020017 41020220 -99296545 + L1M4 LINE L1 1800 2015 -4631 397 133 53 0 chr10 41020354 41020429 -99296336 + L1MA3 LINE L1 6032 6110 -195 28345 95 9 10 chr10 41020432 41025785 -99290980 - L1PA7 LINE L1 0 7592 1445 1175 235 60 22 chr10 41025778 41026195 -99290570 + L1M4 LINE L1 4483 4915 -1729 * 594 174 65 14 chr10 41026195 41026333 -99290432 + MLT1A1 LTR MaLR 1 145 -220 2411 99 3 0 chr10 41026622 41026926 -99289839 + AluSp SINE Alu 1 305 -8 1408 210 100 19 chr10 41026949 41027378 -99289387 + L1MC4 LINE L1 6464 6927 -1115 3190 242 60 44 chr10 41027585 41029792 -99286973 + L1MB2 LINE L1 330 2692 -3952 2183 112 0 43 chr10 41029792 41030114 -99286651 + AluSg SINE Alu 1 308 -2 3190 242 60 44 chr10 41030114 41030366 -99286399 + L1MB2 LINE L1 2692 2938 -3706 * 4028 189 36 24 chr10 41030365 41030929 -99285836 + L1MB2 LINE L1 5119 5675 -994 8023 72 11 5 chr10 41030929 41031993 -99284772 + MER11C LTR ERVK 1 1071 0 4028 189 36 24 chr10 41031993 41032777 -99283988 + L1MB2 LINE L1 5675 6627 -42 843 240 52 0 chr10 41032800 41033087 -99283678 + L1MB5 LINE L1 4081 4401 -1745 758 194 31 6 chr10 41033090 41033250 -99283515 - MER58B DNA MER1_type -39 302 139 609 202 85 48 chr10 41033250 41033522 -99283243 + L1MB5 LINE L1 4390 4671 -1475 2778 164 26 56 chr10 41033524 41034146 -99282619 + L1MB5 LINE L1 5566 6168 -6 2398 85 0 19 chr10 41034313 41034629 -99282136 - AluSg SINE Alu 0 310 1 1207 221 111 3 chr10 41034879 41035186 -99281579 - MER58B DNA MER1_type 0 341 2 1833 111 87 17 chr10 41035734 41036022 -99280743 - AluSg SINE Alu -2 308 1 1676 127 14 40 chr10 41038198 41038356 -99278409 + L1PB3 LINE L1 5878 6028 -126 2064 130 10 0 chr10 41038356 41038655 -99278110 + AluSq SINE Alu 1 302 -11 1676 127 14 40 chr10 41038655 41038771 -99277994 + L1PB3 LINE L1 6028 6145 -9 24 0 0 0 chr10 41038778 41038802 -99277963 + AT_rich Low_complexity Low_complexity 1 24 0 2359 102 0 0 chr10 41039021 41039325 -99277440 - AluSg SINE Alu -6 304 1 1993 145 0 3 chr10 41039377 41039680 -99277085 - AluSx SINE Alu -10 302 1 1500 154 135 0 chr10 41040910 41041176 -99275589 - AluSx SINE Alu -10 302 1 2065 125 7 10 chr10 41042487 41042791 -99273974 - AluSx SINE Alu -9 303 1 2050 128 3 13 chr10 41043191 41043495 -99273270 + AluSc SINE Alu 1 301 -8 2044 217 100 14 chr10 41043507 41044031 -99272734 + MER68 LTR ERV1 11 595 0 1584 155 7 69 chr10 41044045 41044336 -99272429 - AluJo SINE Alu -39 273 1 293 291 0 58 chr10 41044372 41044458 -99272307 + HERVL68 LTR ERVL 346 426 -2611 2445 194 60 39 chr10 41044608 41045253 -99271512 + HERVL68 LTR ERVL 594 1252 -1785 5920 119 34 28 chr10 41045580 41046471 -99270294 + MER49 LTR ERV1 1 899 -24 2403 96 0 0 chr10 41046471 41046774 -99269991 - AluSq SINE Alu -10 303 1 5920 119 34 28 chr10 41046774 41046796 -99269969 + MER49 LTR ERV1 899 919 -4 1680 107 25 0 chr10 41047054 41047297 -99269468 - L1PA13 LINE L1 0 6163 5915 1030 145 38 0 chr10 41047297 41047456 -99269309 + L1PA12 LINE L1 1949 2113 -5468 600 290 67 9 chr10 41047492 41047995 -99268770 + MLT1G LTR MaLR 1 561 -29 185 278 42 0 chr10 41048180 41048252 -99268513 - MIR SINE MIR -10 252 178 207 0 0 0 chr10 41048532 41048555 -99268210 + (CA)n Simple_repeat Simple_repeat 2 24 0 3827 45 5 1 chr10 41048990 41049503 -99267262 - L1PA4 LINE L1 -27 6128 5608 373 141 113 0 chr10 41049510 41049581 -99267184 - MSTD LTR MaLR -2 394 316 32 26 0 0 chr10 41049809 41049848 -99266917 + AT_rich Low_complexity Low_complexity 1 39 0 491 285 96 56 chr10 41050066 41050567 -99266198 + HSATI Satellite Satellite 44 564 -13 299 331 17 6 chr10 41050577 41050752 -99266013 + L1M4 LINE L1 3574 3750 -2396 614 166 40 108 chr10 41050806 41051029 -99265736 + MER4B-int LTR ERV1 3638 3845 -2486 213 39 0 0 chr10 41052025 41052051 -99264714 + (A)n Simple_repeat Simple_repeat 1 26 0 326 173 12 37 chr10 41052082 41052163 -99264602 + MER4B-int LTR ERV1 2406 2484 -4274 502 233 61 28 chr10 41052245 41052425 -99264340 + MER4B-int LTR ERV1 3545 3730 -2868 613 51 39 13 chr10 41052436 41052514 -99264251 + MADE1 DNA Mariner 1 80 0 412 138 0 53 chr10 41052583 41052677 -99264088 + MER4B-int LTR ERV1 3728 3816 -2782 2069 153 114 0 chr10 41052936 41053296 -99263469 + MSTA LTR MaLR 1 401 -27 2289 101 0 0 chr10 41053342 41053630 -99263135 - AluSg SINE Alu -22 288 1 266 128 0 0 chr10 41053630 41053669 -99263096 + MSTA LTR MaLR 390 428 0 9523 165 31 28 chr10 41053669 41054077 -99262688 + MSTA-int LTR MaLR 1 406 -1245 1454 192 91 0 chr10 41054077 41054363 -99262402 + AluJb SINE Alu 1 312 0 9523 165 31 28 chr10 41054363 41055600 -99261165 + MSTA-int LTR MaLR 406 1651 0 2593 162 31 0 chr10 41055600 41056014 -99260751 + MSTA LTR MaLR 1 427 -1 250 318 9 36 chr10 41056288 41056398 -99260367 + MIR SINE MIR 41 147 -61 337 332 80 36 chr10 41056593 41056843 -99259922 - MIR SINE MIR -1 261 1 683 218 83 10 chr10 41057489 41057682 -99259083 - L1MC2 LINE L1 0 6344 6138 3154 112 27 33 chr10 41057952 41058255 -99258510 - MER49 LTR ERV1 -415 508 208 2411 78 3 0 chr10 41058255 41058551 -99258214 - AluY SINE Alu -14 297 1 3154 112 27 33 chr10 41058551 41058758 -99258007 - MER49 LTR ERV1 -715 208 1 459 230 133 12 chr10 41059998 41060163 -99256602 + MLT1C LTR MaLR 283 467 0 352 214 10 10 chr10 41060338 41060436 -99256329 + (TA)n Simple_repeat Simple_repeat 2 99 0 1890 132 3 17 chr10 41060454 41060606 -99256159 - AluSx SINE Alu -27 285 137 1896 122 8 0 chr10 41060606 41060868 -99255897 - AluSq SINE Alu -11 302 39 1890 132 3 17 chr10 41060868 41061004 -99255761 - AluSx SINE Alu -175 137 1 231 226 43 0 chr10 41061363 41061417 -99255348 - MER5A DNA MER1_type -82 106 41 2089 133 0 0 chr10 41061567 41061861 -99254904 + AluSx SINE Alu 1 294 -18 24 0 0 0 chr10 41061861 41061885 -99254880 + AT_rich Low_complexity Low_complexity 1 24 0 979 143 0 0 chr10 41063931 41064078 -99252687 - L1PA16 LINE L1 -9 6157 6011 2020 153 10 0 chr10 41064967 41065275 -99251490 - AluSx SINE Alu -1 311 1 1743 125 91 8 chr10 41065376 41065660 -99251105 + AluSg1 SINE Alu 1 309 0 1889 115 72 0 chr10 41065936 41066214 -99250551 + AluSq SINE Alu 1 298 -15 1938 118 7 4 chr10 41066558 41066830 -99249935 + AluSx SINE Alu 1 273 -39 186 43 0 0 chr10 41066838 41066861 -99249904 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2581 74 0 0 chr10 41068895 41069206 -99247559 - AluY SINE Alu 0 311 1 787 103 0 28 chr10 41069206 41069313 -99247452 - FRAM SINE Alu -19 157 54 907 197 11 115 chr10 41069573 41069946 -99246819 - MLT1A1 LTR MaLR 0 396 39 1777 117 24 0 chr10 41069954 41070223 -99246542 - AluSx SINE Alu 0 301 27 240 128 106 21 chr10 41070227 41070274 -99246491 - AluSx SINE Alu -251 51 1 * 256 111 0 44 chr10 41070274 41070315 -99246450 - MLT1A1 LTR MaLR -386 42 4 1786 264 39 0 chr10 41071245 41071734 -99245031 - LTR53 LTR ERVL -1 518 11 2389 173 69 32 chr10 41071896 41072400 -99244365 - L1MC2 LINE L1 -11 6333 5811 * 3509 230 111 34 chr10 41072385 41073151 -99243614 - L1M4 LINE L1 -1819 4327 3435 2002 127 0 20 chr10 41073151 41073443 -99243322 - AluSg SINE Alu -24 286 1 3509 230 111 34 chr10 41073443 41073871 -99242894 - L1M4 LINE L1 -2711 3435 3041 365 262 57 8 chr10 41074274 41074396 -99242369 + Zaphod DNA AcHobo 3904 4031 0 243 88 0 0 chr10 41074781 41074815 -99241950 + (CA)n Simple_repeat Simple_repeat 1 34 0 337 253 98 41 chr10 41074815 41074993 -99241772 + L1MD3 LINE L1 6153 7796 -12 191 35 0 35 chr10 41077721 41077750 -99239015 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 1034 231 107 28 chr10 41078347 41078771 -99237994 + MLT1B LTR MaLR 1 390 0 31 26 0 0 chr10 41078921 41078959 -99237806 + AT_rich Low_complexity Low_complexity 1 38 0 1767 250 67 59 chr10 41079200 41080068 -99236697 - L1MEc LINE L1 -1404 4811 3937 4437 192 93 40 chr10 41080088 41081288 -99235477 - MER45R DNA AcHobo 0 1581 318 823 246 20 30 chr10 41081352 41081555 -99235210 - MER45R DNA AcHobo -1377 204 4 1115 261 105 16 chr10 41081557 41082280 -99234485 - L1MEc LINE L1 -2279 3936 3101 276 206 33 76 chr10 41082301 41082485 -99234280 + (CATATA)n Simple_repeat Simple_repeat 4 179 0 438 190 66 33 chr10 41082495 41082616 -99234149 + L1M4 LINE L1 3034 3158 -2988 1781 256 79 40 chr10 41082673 41083487 -99233278 - L1MEc LINE L1 -3171 3044 2200 3294 269 68 48 chr10 41083522 41084273 -99232492 - L1MEc LINE L1 -4401 1995 1261 2436 78 7 0 chr10 41084273 41084580 -99232185 - AluSc SINE Alu 0 309 1 3294 269 68 48 chr10 41084580 41084711 -99232054 - L1MEc LINE L1 -5135 1261 1134 1674 136 16 73 chr10 41084711 41085027 -99231738 - AluJb SINE Alu -2 310 13 3294 269 68 48 chr10 41085027 41085744 -99231021 - L1MEc LINE L1 -5262 1134 362 1612 271 94 13 chr10 41085744 41086286 -99230479 + L1M4b LINE L1 347 932 -5927 2424 237 67 13 chr10 41086404 41086962 -99229803 + L1M4b LINE L1 936 1462 -5393 2192 114 13 0 chr10 41086962 41087261 -99229504 + AluSx SINE Alu 1 303 -9 2424 237 67 13 chr10 41087261 41087420 -99229345 + L1M4b LINE L1 1462 1611 -5244 2167 120 0 13 chr10 41087420 41087737 -99229028 + AluSq SINE Alu 1 313 0 2424 237 67 13 chr10 41087737 41087955 -99228810 + L1M4b LINE L1 1611 1901 -4954 491 198 42 0 chr10 41087957 41088053 -99228712 + U6 snRNA snRNA 2 101 -6 516 192 48 41 chr10 41088098 41088244 -99228521 + L1M4b LINE L1 2029 2175 -4784 186 296 111 25 chr10 41088331 41088412 -99228353 - MIR SINE MIR -97 165 78 2551 47 3 0 chr10 41088425 41088723 -99228042 - L1PA4 LINE L1 -3 6152 5854 320 328 85 10 chr10 41088785 41089080 -99227685 + L1M4b LINE L1 2265 2683 -4455 1553 199 17 23 chr10 41089080 41089382 -99227383 + AluJb SINE Alu 1 300 -12 180 125 0 0 chr10 41089415 41089447 -99227318 + (A)n Simple_repeat Simple_repeat 1 32 0 2113 106 27 3 chr10 41089453 41089745 -99227020 + AluSx SINE Alu 1 299 -13 386 235 62 108 chr10 41089769 41089911 -99226854 + L1MEc LINE L1 1731 1878 -4518 977 144 88 6 chr10 41089911 41090093 -99226672 + L1PA8A LINE L1 5946 6140 0 386 235 62 108 chr10 41090093 41090124 -99226641 + L1MEc LINE L1 1878 1909 -4487 1377 138 47 30 chr10 41090124 41090356 -99226409 - MER46A DNA MER2_type 0 236 1 386 235 62 108 chr10 41090356 41090548 -99226217 + L1MEc LINE L1 1909 2083 -4313 29 47 0 0 chr10 41090564 41090607 -99226158 + AT_rich Low_complexity Low_complexity 1 43 0 1025 191 80 0 chr10 41090612 41090811 -99225954 + L1PB4 LINE L1 5942 6156 0 328 185 15 15 chr10 41090913 41090978 -99225787 - Tigger5 DNA MER2_type 0 2323 2259 229 227 15 15 chr10 41091045 41091111 -99225654 - Tigger5 DNA MER2_type -7 2316 2251 * 308 218 0 0 chr10 41091080 41091135 -99225630 - Tigger5 DNA MER2_type -2268 55 1 6332 250 84 31 chr10 41091174 41092412 -99224353 + L1MEc LINE L1 2238 3410 -2805 1881 156 7 16 chr10 41092412 41092720 -99224045 + AluJb SINE Alu 5 309 -3 6332 250 84 31 chr10 41092720 41093534 -99223231 + L1MEc LINE L1 3410 4180 -2035 1447 156 120 18 chr10 41093534 41093810 -99222955 + AluSg SINE Alu 1 304 -6 6332 250 84 31 chr10 41093810 41094312 -99222453 + L1MEc LINE L1 4180 4654 -1561 2058 132 13 7 chr10 41094312 41094615 -99222150 + AluSg SINE Alu 1 305 -5 6332 250 84 31 chr10 41094615 41095037 -99221728 + L1MEc LINE L1 4654 5407 -808 2353 258 90 38 chr10 41095031 41095476 -99221289 - L1M4 LINE L1 -1820 4326 3906 * 1997 145 10 3 chr10 41095476 41095779 -99220986 - AluSx SINE Alu -7 305 1 2353 258 90 38 chr10 41095779 41096230 -99220535 - L1M4 LINE L1 -2240 3906 3383 2715 167 75 60 chr10 41096240 41096518 -99220247 + L1MC3 LINE L1 6171 6443 -1342 2124 145 0 0 chr10 41096518 41096829 -99219936 + AluSx SINE Alu 1 311 -1 2715 167 75 60 chr10 41096829 41097233 -99219532 + L1MC3 LINE L1 6443 6863 -922 2882 186 53 9 chr10 41097248 41097853 -99218912 + L1MC3 LINE L1 7124 8026 -16 3108 216 28 45 chr10 41097874 41097926 -99218839 + L1MB8 LINE L1 5352 5403 -775 2178 110 0 3 chr10 41097926 41098225 -99218540 + AluSg1 SINE Alu 1 298 -11 3108 216 28 45 chr10 41098225 41098889 -99217876 + L1MB8 LINE L1 5403 6077 -101 2151 111 3 3 chr10 41098889 41099178 -99217587 + AluSx SINE Alu 1 289 -23 1668 108 62 88 chr10 41099186 41099493 -99217272 + AluSx SINE Alu 1 299 -13 3108 216 28 45 chr10 41099493 41099594 -99217171 + L1MB8 LINE L1 6084 6165 -13 227 319 83 43 chr10 41099625 41099879 -99216886 - L1M4 LINE L1 -1796 5161 4898 2128 93 4 4 chr10 41099950 41100254 -99216511 - AluSc SINE Alu 0 304 1 3136 209 79 28 chr10 41100312 41100337 -99216428 - L1MD2 LINE L1 -12 6347 6325 2219 135 0 0 chr10 41100337 41100649 -99216116 - AluJb SINE Alu 0 312 1 3136 209 79 28 chr10 41100649 41101046 -99215719 - L1MD2 LINE L1 -34 6325 5950 959 247 101 45 chr10 41101046 41101443 -99215322 + LTR52 LTR ERVL 1 419 -2 3136 209 79 28 chr10 41101443 41101846 -99214919 - L1MD2 LINE L1 -409 5950 5479 654 247 73 15 chr10 41101882 41102141 -99214624 - L1M4 LINE L1 -4946 2013 1740 309 162 27 14 chr10 41102201 41102275 -99214490 - L1M4 LINE L1 -5412 1447 1373 381 261 114 23 chr10 41102318 41102494 -99214271 + L1MB4 LINE L1 15 206 -6336 1712 238 20 47 chr10 41102494 41103170 -99213595 + L1MB4 LINE L1 1764 2456 -4188 2036 145 0 7 chr10 41103170 41103467 -99213298 + AluSx SINE Alu 3 297 -15 1712 238 20 47 chr10 41103467 41103634 -99213131 + L1MB4 LINE L1 2456 2626 -4018 222 0 79 0 chr10 41103634 41103672 -99213093 + T-rich Low_complexity Low_complexity 1 41 0 1556 159 50 4 chr10 41103672 41103930 -99212835 - AluJo SINE Alu -32 280 11 1712 238 20 47 chr10 41103930 41104289 -99212476 + L1MB4 LINE L1 2624 3043 -3601 1209 186 67 42 chr10 41104291 41104576 -99212189 + AluJb SINE Alu 1 292 -20 204 40 0 0 chr10 41104586 41104611 -99212154 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 835 178 74 35 chr10 41104765 41104967 -99211798 + L1MB4 LINE L1 5194 5403 -1241 571 240 39 7 chr10 41104980 41105134 -99211631 + L1MB5 LINE L1 5897 6055 -119 231 174 0 130 chr10 41105138 41105207 -99211558 + L1MB4 LINE L1 5404 5463 -1181 365 204 108 0 chr10 41105208 41105301 -99211464 + L1MB4 LINE L1 5528 5630 -1014 2147 112 18 0 chr10 41105308 41105594 -99211171 + AluSx SINE Alu 1 291 -21 1927 219 135 9 chr10 41105620 41106159 -99210606 + L1MB4 LINE L1 6070 6676 -2 6206 233 58 68 chr10 41106174 41106241 -99210524 - L1M4c LINE L1 -1222 5160 5094 1475 192 40 51 chr10 41106241 41106616 -99210149 - MLT1A2 LTR MaLR 0 374 4 6206 233 58 68 chr10 41106616 41106740 -99210025 - L1M4c LINE L1 -1288 5094 4970 2970 179 62 2 chr10 41106740 41107259 -99209506 - MER44D DNA MER2_type 0 605 1 6206 233 58 68 chr10 41107259 41107752 -99209013 - L1M4c LINE L1 -1412 4970 4474 2183 106 22 19 chr10 41107752 41108063 -99208702 - AluSp SINE Alu -1 312 1 6206 233 58 68 chr10 41108063 41108696 -99208069 - L1M4c LINE L1 -1908 4474 3836 2060 134 0 7 chr10 41108696 41108995 -99207770 + AluSg SINE Alu 1 297 -13 6206 233 58 68 chr10 41108995 41109261 -99207504 - L1M4c LINE L1 -2546 3836 3569 2133 128 0 10 chr10 41109261 41109567 -99207198 - AluSx SINE Alu -9 303 1 6206 233 58 68 chr10 41109567 41110287 -99206478 - L1M4c LINE L1 -2813 3569 2880 1924 159 24 0 chr10 41110287 41110583 -99206182 - AluSx SINE Alu -9 303 1 6206 233 58 68 chr10 41110583 41110976 -99205789 - L1M4c LINE L1 -3502 2880 2485 768 186 6 25 chr10 41111007 41111168 -99205597 + L1M1 LINE L1 19 176 -7389 4376 110 82 20 chr10 41111168 41111859 -99204906 + L1MA2 LINE L1 5571 6304 0 1005 209 223 0 chr10 41111863 41112213 -99204552 - L1M4c LINE L1 -3921 2461 2034 1437 238 114 24 chr10 41112218 41112605 -99204160 - L1M4c LINE L1 -4384 1998 1647 4182 50 2 10 chr10 41112605 41113144 -99203621 + L1PA4 LINE L1 5657 6155 0 1437 238 114 24 chr10 41113144 41113354 -99203411 - L1M4c LINE L1 -4735 1647 1228 638 326 108 6 chr10 41113369 41113908 -99202857 + L2 LINE L2 2541 3141 -172 189 74 0 0 chr10 41113919 41113946 -99202819 + (CATATA)n Simple_repeat Simple_repeat 2 28 0 2055 129 23 0 chr10 41113968 41114270 -99202495 - AluSx SINE Alu -3 309 1 1890 114 0 52 chr10 41116468 41116776 -99199989 + AluSq SINE Alu 1 292 -21 1972 124 43 7 chr10 41116914 41117196 -99199569 + AluSq SINE Alu 1 292 -21 441 282 201 6 chr10 41117203 41117551 -99199214 + L1M4 LINE L1 4557 4972 -1174 472 219 26 123 chr10 41117707 41117753 -99199012 - MER58B DNA MER1_type -2080 340 291 2030 126 30 0 chr10 41117753 41118055 -99198710 + AluSx SINE Alu 1 311 -1 472 219 26 123 chr10 41118055 41118163 -99198602 - MER58B DNA MER1_type -2129 291 201 237 305 38 15 chr10 41118167 41118298 -99198467 + L1ME3 LINE L1 5989 6122 -40 1798 95 7 102 chr10 41118361 41118666 -99198099 + AluSg SINE Alu 27 302 -8 2317 95 0 0 chr10 41118682 41118976 -99197789 + AluSc SINE Alu 1 294 -15 2072 139 0 0 chr10 41119359 41119668 -99197097 + AluSx SINE Alu 1 309 -3 201 239 183 14 chr10 41120354 41120425 -99196340 + MIR SINE MIR 21 103 -105 2233 81 34 0 chr10 41120492 41120787 -99195978 - AluSq SINE Alu -8 305 1 1596 163 28 21 chr10 41122428 41122716 -99194049 + AluJb SINE Alu 1 290 -22 2236 112 0 3 chr10 41122851 41123154 -99193611 + AluSc SINE Alu 1 302 -7 1132 238 48 18 chr10 41123201 41123552 -99193213 - L1ME1 LINE L1 -1 6165 5809 1910 192 139 22 chr10 41123552 41124042 -99192723 - LTR10B LTR ERV1 0 547 1 346 265 20 0 chr10 41124042 41124144 -99192621 - L1ME1 LINE L1 -2230 5812 5709 2144 183 96 30 chr10 41124234 41124703 -99192062 - MLT2B1 LTR ERVL 0 520 21 2421 96 0 3 chr10 41124714 41125028 -99191737 - AluSp SINE Alu 0 313 1 4882 166 16 36 chr10 41125112 41126158 -99190607 - L1MA5 LINE L1 0 6300 5234 1764 170 3 0 chr10 41126158 41126467 -99190298 - AluJb SINE Alu 0 310 1 1864 130 76 0 chr10 41126476 41126644 -99190121 - AluSc SINE Alu -12 297 98 351 0 0 0 chr10 41126644 41126683 -99190082 + (TG)n Simple_repeat Simple_repeat 2 40 0 1864 130 76 0 chr10 41126683 41126790 -99189975 - AluSc SINE Alu -211 98 1 2027 118 4 4 chr10 41126800 41127118 -99189647 - AluY SINE Alu 0 318 1 4882 166 16 36 chr10 41127118 41127370 -99189395 - L1MA5 LINE L1 -1083 5217 4869 26 30 0 0 chr10 41127421 41127454 -99189311 + AT_rich Low_complexity Low_complexity 1 33 0 517 290 147 13 chr10 41127478 41127792 -99188973 - LTR50 LTR ERVL -3 792 437 593 160 50 8 chr10 41127937 41128056 -99188709 + L1MB7 LINE L1 6041 6164 -20 671 86 0 0 chr10 41128068 41128149 -99188616 - AluSc SINE Alu -16 293 213 628 236 51 77 chr10 41128238 41128670 -99188095 + LTR15 LTR ERV1 112 493 0 1428 180 38 55 chr10 41128672 41129072 -99187693 + HERV15 LTR ERV1 3 395 -8340 213 94 0 0 chr10 41129247 41129279 -99187486 + (TG)n Simple_repeat Simple_repeat 2 33 0 587 224 56 87 chr10 41129311 41129632 -99187133 - MLT2B1 LTR ERVL -40 480 100 1736 207 126 2 chr10 41129712 41130133 -99186632 - L1PB4 LINE L1 0 6156 5684 1805 166 0 0 chr10 41130134 41130423 -99186342 - AluJo SINE Alu -12 300 12 1234 128 0 0 chr10 41130425 41130604 -99186161 - AluSg/x SINE Alu -14 296 118 42588 39 24 4 chr10 41130604 41136613 -99180152 - L1PA2 LINE L1 -15 6140 3 418 103 162 0 chr10 41136629 41136697 -99180068 - AluY SINE Alu -179 132 54 1199 144 0 16 chr10 41136698 41136886 -99179879 - AluSg SINE Alu -125 185 1 987 116 94 107 chr10 41136887 41137084 -99179681 - L1PB4 LINE L1 -476 5680 5485 855 99 0 0 chr10 41137084 41137195 -99179570 - HY1 scRNA scRNA -1 111 1 987 116 94 107 chr10 41137195 41137221 -99179544 - L1PB4 LINE L1 -671 5485 5460 520 168 196 0 chr10 41137222 41137329 -99179436 - MLT2B2 LTR ERVL -387 128 1 243 277 119 10 chr10 41137335 41137436 -99179329 - MIR SINE MIR -57 151 40 874 242 64 64 chr10 41138247 41138538 -99178227 + L1MEc LINE L1 36 329 -6067 1898 169 3 3 chr10 41138538 41138846 -99177919 + AluSx SINE Alu 1 308 -4 874 242 64 64 chr10 41138846 41138913 -99177852 + L1MEc LINE L1 328 394 -6002 1808 176 67 8 chr10 41139932 41140290 -99176475 + MLT1B LTR MaLR 1 379 -11 1574 80 0 10 chr10 41140338 41140537 -99176228 + MER107 DNA MER1_type 1 197 0 1609 171 30 23 chr10 41140614 41140755 -99176010 + AluJb SINE Alu 1 140 -172 2015 124 21 3 chr10 41140755 41141046 -99175719 + AluSx SINE Alu 1 296 -16 1609 171 30 23 chr10 41141046 41141208 -99175557 + AluJb SINE Alu 140 306 -6 21 0 0 0 chr10 41141511 41141532 -99175233 + AT_rich Low_complexity Low_complexity 1 21 0 2128 118 3 0 chr10 41141535 41141845 -99174920 + AluSp SINE Alu 1 311 0 1251 218 51 11 chr10 41141958 41142233 -99174532 - AluJo SINE Alu -26 286 1 2245 107 3 0 chr10 41142890 41143188 -99173577 + AluSp SINE Alu 1 299 -14 317 280 75 0 chr10 41143200 41143307 -99173458 - L1M4b LINE L1 -6737 122 8 1800 134 47 30 chr10 41143311 41143609 -99173156 - AluSx SINE Alu -9 303 1 2356 106 0 6 chr10 41143623 41143935 -99172830 - AluSg SINE Alu 0 310 1 483 206 10 0 chr10 41143938 41144040 -99172725 - L1MEc LINE L1 -1980 4235 4133 1113 90 0 0 chr10 41144042 41144176 -99172589 - AluSq/x SINE Alu -178 134 1 2315 107 0 0 chr10 41144210 41144510 -99172255 - AluSg SINE Alu -5 305 6 1444 186 40 193 chr10 41144512 41144909 -99171856 - L1MEc LINE L1 -2848 3367 2911 1976 137 7 3 chr10 41144909 41145201 -99171564 - AluSg SINE Alu -17 293 1 1444 186 40 193 chr10 41145201 41145238 -99171527 - L1MEc LINE L1 -3304 2911 2870 1446 197 44 7 chr10 41145238 41145533 -99171232 + AluJo SINE Alu 5 310 -2 1444 186 40 193 chr10 41145533 41145870 -99170895 - L1MEc LINE L1 -3345 2870 2754 2158 125 3 3 chr10 41145870 41146175 -99170590 - AluSp SINE Alu -8 305 1 1444 186 40 193 chr10 41146175 41146318 -99170447 - L1MEc LINE L1 -3461 2754 2591 * 4086 218 82 38 chr10 41146316 41146671 -99170094 - L1MEc LINE L1 -4993 1272 934 2208 122 0 0 chr10 41146671 41146966 -99169799 + AluSg SINE Alu 1 295 -15 4086 218 82 38 chr10 41146966 41147154 -99169611 - L1MEc LINE L1 -5331 934 756 2132 115 10 0 chr10 41147154 41147449 -99169316 - AluSx SINE Alu -14 298 1 4086 218 82 38 chr10 41147449 41148189 -99168576 - L1MEc LINE L1 -5509 756 41 739 181 0 0 chr10 41148189 41148316 -99168449 - AluSg/x SINE Alu -4 308 182 4344 60 33 56 chr10 41148338 41149397 -99167368 + MER11A LTR ERVK 1 1265 -1 1084 124 0 0 chr10 41149397 41149542 -99167223 - AluSq/x SINE Alu -167 145 1 1094 216 14 106 chr10 41149552 41149607 -99167158 + L1MC4 LINE L1 7655 7713 -329 1892 148 0 26 chr10 41149607 41149911 -99166854 + AluSc SINE Alu 1 296 -13 1094 216 14 106 chr10 41149911 41150213 -99166552 + L1MC4 LINE L1 7713 7971 -71 1919 146 43 0 chr10 41150213 41150494 -99166271 - AluSg SINE Alu -17 293 1 1094 216 14 106 chr10 41150494 41150552 -99166213 + L1MC4 LINE L1 7971 8033 -9 1950 141 3 10 chr10 41150552 41150850 -99165915 + AluSx SINE Alu 1 296 -16 2279 113 0 3 chr10 41150934 41151236 -99165529 + AluSq SINE Alu 1 301 -12 234 263 53 96 chr10 41151238 41151447 -99165318 + L1ME3A LINE L1 5963 6162 -8 403 118 108 49 chr10 41151748 41151850 -99164915 - MER54A LTR ERVL -786 115 8 2185 111 0 0 chr10 41151990 41152279 -99164486 - AluSc SINE Alu -20 289 1 4813 136 27 21 chr10 41152318 41153092 -99163673 - MER4E LTR ERV1 0 779 1 3110 185 52 23 chr10 41153227 41153255 -99163510 + MER67C LTR ERV1 3 29 -681 2169 114 0 10 chr10 41153255 41153553 -99163212 + AluSg1 SINE Alu 1 295 -14 3110 185 52 23 chr10 41153553 41154212 -99162553 + MER67C LTR ERV1 29 710 0 206 313 16 0 chr10 41154231 41154295 -99162470 + (TATG)n Simple_repeat Simple_repeat 1 65 0 1661 186 62 3 chr10 41154390 41154713 -99162052 + MER2 DNA MER2_type 2 343 -1 307 216 93 174 chr10 41155275 41155609 -99161156 - L1M2 LINE L1 -5835 1014 708 6364 148 26 9 chr10 41156496 41158283 -99158482 - L1MA4 LINE L1 -2 6298 4543 1694 149 78 11 chr10 41158283 41158564 -99158201 - AluSx SINE Alu -12 300 1 6364 148 26 9 chr10 41158564 41158714 -99158051 - L1MA4 LINE L1 -1757 4543 4397 2249 104 3 3 chr10 41158714 41159012 -99157753 - AluSp SINE Alu -15 298 1 6364 148 26 9 chr10 41159012 41159195 -99157570 - L1MA4 LINE L1 -1903 4397 4146 333 197 79 39 chr10 41159745 41159872 -99156893 - L1ME4a LINE L1 -274 5847 5716 369 0 0 0 chr10 41160224 41160265 -99156500 + (TG)n Simple_repeat Simple_repeat 2 42 0 616 308 70 0 chr10 41160358 41160543 -99156222 + Charlie1a DNA MER1_type 1 198 -1257 2219 111 3 3 chr10 41160563 41160861 -99155904 - AluSx SINE Alu -14 298 1 22 0 0 0 chr10 41160870 41160892 -99155873 + AT_rich Low_complexity Low_complexity 1 22 0 500 332 105 9 chr10 41160993 41161258 -99155507 - L2 LINE L2 -250 3063 2777 207 0 0 0 chr10 41161260 41161283 -99155482 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1605 236 19 3 chr10 41161334 41161707 -99155058 - L1M4 LINE L1 -2070 4076 3698 662 254 90 11 chr10 41161713 41161902 -99154863 + MER63A DNA MER1_type 7 210 0 549 299 10 10 chr10 41161902 41162109 -99154656 - L1M4 LINE L1 -2448 3698 3492 3981 174 51 20 chr10 41162111 41162895 -99153870 - L1MB5 LINE L1 -1 6409 5602 1125 229 87 0 chr10 41162931 41163149 -99153616 + MER8 DNA MER2_type 3 239 0 3038 222 71 19 chr10 41163151 41163240 -99153525 - L1MB5 LINE L1 -788 5594 5511 2244 114 3 0 chr10 41163240 41163537 -99153228 + AluSx SINE Alu 1 298 -14 1995 139 0 0 chr10 41163539 41163820 -99152945 + AluSg SINE Alu 1 281 -29 3038 222 71 19 chr10 41163820 41164187 -99152578 - L1MB5 LINE L1 -871 5511 5164 1660 180 44 3 chr10 41164187 41164481 -99152284 + AluJb SINE Alu 1 306 -6 3038 222 71 19 chr10 41164481 41164849 -99151916 - L1MB5 LINE L1 -1218 5164 4723 1493 242 63 21 chr10 41164839 41165115 -99151650 - L1MB5 LINE L1 -3797 2585 2322 * 2259 121 131 31 chr10 41165115 41165462 -99151303 + MSTA LTR MaLR 1 392 -36 2059 118 20 10 chr10 41165462 41165758 -99151007 - AluSx SINE Alu -13 299 1 2259 121 131 31 chr10 41165758 41165798 -99150967 + MSTA LTR MaLR 392 427 -1 1493 242 63 21 chr10 41165798 41166468 -99150297 - L1MB5 LINE L1 -4060 2322 1515 6663 183 29 1 chr10 41166482 41167652 -99149113 - MSTB-int LTR MaLR -446 1205 3 2873 142 9 34 chr10 41167652 41167894 -99148871 - MSTB LTR MaLR 0 426 198 2136 141 0 0 chr10 41167894 41168200 -99148565 - AluSx SINE Alu -4 308 3 2873 142 9 34 chr10 41168200 41168394 -99148371 - MSTB LTR MaLR -228 198 1 1976 137 3 26 chr10 41168473 41168803 -99147962 + AluSx SINE Alu 1 312 0 314 267 17 35 chr10 41168832 41168948 -99147817 - L1MB5 LINE L1 -6248 136 23 779 259 29 38 chr10 41168953 41169269 -99147496 - L1M4 LINE L1 -2636 3510 3198 405 257 72 0 chr10 41169313 41169465 -99147300 - L1M4 LINE L1 -3283 2863 2701 2120 109 3 26 chr10 41169636 41169938 -99146827 - AluSg SINE Alu -15 295 1 2368 92 3 3 chr10 41169948 41170253 -99146512 - AluSp SINE Alu -8 305 1 355 273 85 12 chr10 41170365 41170530 -99146235 - HAL1 LINE L1 -856 1651 1475 2373 78 0 34 chr10 41171244 41171565 -99145200 - AluY SINE Alu -1 310 1 1348 106 0 0 chr10 41171807 41171986 -99144779 + AluY SINE Alu 124 302 -9 2242 112 0 0 chr10 41171988 41172292 -99144473 + AluSx SINE Alu 1 304 -8 242 156 22 0 chr10 41172292 41172337 -99144428 + HAL1b LINE L1 492 537 -811 232 311 0 0 chr10 41172329 41172403 -99144362 + L1M4 LINE L1 2944 3017 -3129 * 21 0 0 31 chr10 41172829 41172844 -99143921 + AT_rich Low_complexity Low_complexity 1 15 -16 1966 142 0 3 chr10 41172844 41173132 -99143633 - AluSx SINE Alu -25 287 1 21 0 0 31 chr10 41173132 41173148 -99143617 + AT_rich Low_complexity Low_complexity 15 31 0 505 191 0 48 chr10 41173166 41173271 -99143494 - AluSg/x SINE Alu -83 226 127 344 303 84 26 chr10 41173710 41173781 -99142984 + L2 LINE L2 3146 3211 -102 2034 161 52 3 chr10 41173781 41174110 -99142655 - MER7A DNA MER2_type -1 345 3 344 303 84 26 chr10 41174110 41174193 -99142572 + L2 LINE L2 3211 3309 -4 2222 113 7 0 chr10 41174963 41175264 -99141501 - AluSp SINE Alu -10 303 1 369 283 0 0 chr10 41175806 41175898 -99140867 + L2 LINE L2 3222 3313 0 1965 124 13 23 chr10 41175916 41176222 -99140543 + AluSx SINE Alu 1 303 -9 2131 129 0 0 chr10 41176732 41177027 -99139738 - AluSx SINE Alu -17 295 1 617 253 173 18 chr10 41181064 41181289 -99135476 + MIR SINE MIR 2 261 -1 1222 204 104 36 chr10 41181450 41181759 -99135006 + MER58B DNA MER1_type 1 330 -11 1774 163 0 30 chr10 41182335 41182636 -99134129 - AluJb SINE Alu -16 296 5 22 0 0 0 chr10 41182949 41182971 -99133794 + AT_rich Low_complexity Low_complexity 1 22 0 1520 161 56 0 chr10 41183033 41183282 -99133483 + AluSx SINE Alu 5 267 -45 375 270 132 17 chr10 41183778 41184155 -99132610 + MLT1H LTR MaLR 32 521 -34 1951 150 6 22 chr10 41184337 41184476 -99132289 + AluSq SINE Alu 1 141 -172 2100 112 14 7 chr10 41184476 41184772 -99131993 + AluSg SINE Alu 1 298 -12 1951 150 6 22 chr10 41184772 41184945 -99131820 + AluSq SINE Alu 141 308 -5 2260 119 0 0 chr10 41185329 41185632 -99131133 - AluSc SINE Alu -5 304 2 2340 87 3 7 chr10 41185633 41185932 -99130833 - AluSg SINE Alu -12 298 1 2012 138 7 7 chr10 41186111 41186408 -99130357 + AluSx SINE Alu 1 297 -15 232 275 0 29 chr10 41186488 41186557 -99130208 + MER88 LTR ERVL 87 153 -311 * 1679 204 101 28 chr10 41186498 41186963 -99129802 - MER74B LTR ERVL -77 545 47 2079 146 0 0 chr10 41187079 41187374 -99129391 + AluSx SINE Alu 1 295 -17 1466 231 0 0 chr10 41187628 41187905 -99128860 + HERVS71 LTR ERV1 7972 8248 -730 464 155 36 12 chr10 41187923 41188007 -99128758 - LTR6A LTR ERV1 -478 86 1 19930 181 5 2 chr10 41188007 41193147 -99123618 - HERVS71 LTR ERV1 -69 8909 3721 14454 217 31 14 chr10 41193154 41196567 -99120198 - HERVS71 LTR ERV1 -5381 3597 4 2401 175 26 36 chr10 41196569 41197072 -99119693 - LTR6B LTR ERV1 0 558 61 716 355 38 14 chr10 41197663 41198086 -99118679 + ERVL LTR ERVL 2644 3076 -2688 1610 142 83 88 chr10 41198454 41198658 -99118107 + L1MA8 LINE L1 5857 6060 -231 1788 92 135 11 chr10 41198658 41198918 -99117847 + AluSg1 SINE Alu 1 292 -17 1610 142 83 88 chr10 41198918 41199121 -99117644 + L1MA8 LINE L1 6060 6262 -29 238 217 0 0 chr10 41199114 41199160 -99117605 - L1MC4 LINE L1 -1341 6701 6656 * 303 102 0 0 chr10 41199150 41199199 -99117566 + L1MA8 LINE L1 6221 6269 -22 1719 172 14 0 chr10 41199199 41199484 -99117281 + AluJb SINE Alu 1 289 -23 2162 116 0 7 chr10 41199490 41199783 -99116982 + AluSp SINE Alu 1 291 -22 2206 122 3 0 chr10 41199795 41200091 -99116674 + AluSq SINE Alu 1 297 -16 1606 188 10 13 chr10 41200100 41200403 -99116362 + AluSx SINE Alu 6 307 -5 2375 104 57 28 chr10 41200433 41200787 -99115978 + THE1B LTR MaLR 1 364 0 973 336 111 32 chr10 41200831 41201697 -99115068 + ERVL LTR ERVL 3572 4505 -1259 1607 175 79 0 chr10 41201828 41202120 -99114645 + MLT1A1 LTR MaLR 49 363 -2 721 160 33 73 chr10 41202194 41202344 -99114421 - AluJo SINE Alu -87 225 82 2380 94 0 3 chr10 41202607 41202905 -99113860 + AluY SINE Alu 1 297 -14 2578 145 14 11 chr10 41202917 41203358 -99113407 + L1MB7 LINE L1 5694 6135 -49 491 257 46 0 chr10 41203386 41203495 -99113270 - MER81 DNA DNA 0 114 1 495 271 93 16 chr10 41203550 41203808 -99112957 + L1MEc LINE L1 980 1224 -4981 824 272 51 12 chr10 41203902 41204233 -99112532 + L1MEc LINE L1 1543 1886 -4510 251 270 130 0 chr10 41204237 41204352 -99112413 - L1M4 LINE L1 -3160 2986 2857 2295 100 0 3 chr10 41204371 41204670 -99112095 - AluSq SINE Alu -14 299 2 4272 164 25 13 chr10 41204756 41204803 -99111962 - L1MB1 LINE L1 0 6168 6123 2359 85 3 0 chr10 41204803 41205098 -99111667 - AluSg SINE Alu -14 296 1 4272 164 25 13 chr10 41205098 41205287 -99111478 - L1MB1 LINE L1 -45 6123 5938 885 170 110 60 chr10 41205287 41205487 -99111278 + MER6B DNA MER2_type 1 210 0 4272 164 25 13 chr10 41205487 41206017 -99110748 - L1MB1 LINE L1 -230 5938 5392 2360 233 106 7 chr10 41206016 41206717 -99110048 - L1M4 LINE L1 -3267 2879 2110 * 2875 150 35 33 chr10 41206718 41206848 -99109917 - L1PA15 LINE L1 -3 6162 6034 2247 115 0 3 chr10 41206848 41207152 -99109613 - AluSx SINE Alu -8 304 2 2875 150 35 33 chr10 41207152 41207540 -99109225 - L1PA15 LINE L1 -131 6034 5643 1828 68 25 0 chr10 41207540 41207756 -99109009 - L1MA1 LINE L1 -1 6301 6059 2190 114 0 3 chr10 41207757 41208054 -99108711 - AluSg SINE Alu -14 296 1 6400 176 14 5 chr10 41208058 41208690 -99108075 - L1MB1 LINE L1 -880 5266 4618 2324 100 7 0 chr10 41208690 41209000 -99107765 - AluSx SINE Alu 0 312 1 6400 176 14 5 chr10 41209000 41209541 -99107224 - L1MB1 LINE L1 -1528 4618 4083 4173 158 60 15 chr10 41209527 41210731 -99106034 - L1P4 LINE L1 -477 5688 4410 * 2068 107 4 7 chr10 41210731 41211044 -99105721 - AluSg SINE Alu 0 312 1 4173 158 60 15 chr10 41211044 41211107 -99105658 - L1P4 LINE L1 -1755 4410 4351 1997 130 58 0 chr10 41211140 41211432 -99105333 - AluSx SINE Alu -3 309 1 1544 159 41 12 chr10 41211436 41211803 -99104962 - L1MC/D LINE L1 -743 5821 5612 622 203 27 59 chr10 41211837 41211943 -99104822 - L1MC/D LINE L1 -4205 2359 2260 2989 83 11 5 chr10 41211943 41212316 -99104449 + THE1C LTR MaLR 1 375 0 622 203 27 59 chr10 41212316 41212396 -99104369 - L1MC/D LINE L1 -4304 2260 2179 2894 190 101 43 chr10 41212407 41213471 -99103294 - L1MCa LINE L1 -4455 2109 894 1113 216 50 11 chr10 41213533 41213816 -99102949 - L1MCa LINE L1 -5162 883 590 437 113 0 0 chr10 41213808 41213870 -99102895 + L1MB7 LINE L1 5558 5619 -561 * 2239 159 151 75 chr10 41213890 41213917 -99102848 + LTR25 LTR ERV1 38 62 -732 2163 118 0 10 chr10 41213917 41214221 -99102544 - AluSx SINE Alu -11 301 1 2239 159 151 75 chr10 41214221 41214854 -99101911 + LTR25 LTR ERV1 62 794 0 1585 214 69 18 chr10 41214872 41215265 -99101500 + L1MB7 LINE L1 5617 6029 -155 752 183 73 74 chr10 41215259 41215298 -99101467 + L1MC3 LINE L1 7541 7579 -463 * 1639 181 24 7 chr10 41215298 41215590 -99101175 - AluJb SINE Alu -15 297 1 752 183 73 74 chr10 41215590 41215776 -99100989 + L1MC3 LINE L1 7579 8035 -7 2017 138 0 24 chr10 41216013 41216311 -99100454 + AluSx SINE Alu 1 291 -21 914 248 110 55 chr10 41216336 41216753 -99100012 + L1MEc LINE L1 1439 1832 -4564 1901 97 89 0 chr10 41216753 41217022 -99099743 + AluSc SINE Alu 1 293 -16 914 248 110 55 chr10 41217022 41217093 -99099672 + L1MEc LINE L1 1832 1898 -4498 2283 94 0 13 chr10 41217093 41217391 -99099374 + AluSx SINE Alu 1 294 -18 914 248 110 55 chr10 41217391 41217646 -99099119 + L1MEc LINE L1 1898 2224 -4172 * 2121 217 91 7 chr10 41217622 41218500 -99098265 + L1MDb LINE L1 4 1073 -5333 2122 106 0 3 chr10 41218500 41218782 -99097983 + AluSx SINE Alu 1 281 -31 2121 217 91 7 chr10 41218782 41218811 -99097954 + L1MDb LINE L1 1073 1098 -5308 1558 222 45 26 chr10 41218824 41219202 -99097563 + L1MA9 LINE L1 3 387 -6781 4292 196 45 19 chr10 41219210 41220022 -99096743 + L1MA9 LINE L1 5813 6678 -655 2207 100 24 0 chr10 41220022 41220313 -99096452 + AluSp SINE Alu 1 298 -15 4292 196 45 19 chr10 41220313 41220942 -99095823 + L1MA9 LINE L1 6678 7289 -44 2232 178 52 24 chr10 41220942 41221363 -99095402 + Tigger2a DNA MER2_type 1 433 -1 5084 136 33 35 chr10 41221363 41221623 -99095142 + Tigger3b DNA MER2_type 322 581 -2447 1776 156 17 13 chr10 41221623 41221924 -99094841 + AluJb SINE Alu 1 302 -10 5084 136 33 35 chr10 41221924 41222060 -99094705 + Tigger3b DNA MER2_type 581 716 -2312 2190 114 7 0 chr10 41222060 41222358 -99094407 + AluSq SINE Alu 1 300 -13 5084 136 33 35 chr10 41222358 41222871 -99093894 + Tigger3b DNA MER2_type 716 1230 -1 1817 230 66 78 chr10 41222872 41223316 -99093449 + L1ME2 LINE L1 4228 4676 -1470 2278 105 0 0 chr10 41223316 41223612 -99093153 + AluSx SINE Alu 2 297 -15 1817 230 66 78 chr10 41223612 41223728 -99093037 + L1ME2 LINE L1 4676 4792 -1354 2159 138 14 46 chr10 41223728 41224076 -99092689 - MER1B DNA MER1_type 0 337 1 1817 230 66 78 chr10 41224076 41224300 -99092465 + L1ME2 LINE L1 4792 5004 -1142 1048 148 0 6 chr10 41224437 41224599 -99092166 + AluSp SINE Alu 150 310 -3 2158 224 64 77 chr10 41224619 41225067 -99091698 + L1ME2 LINE L1 5258 5710 -454 1987 170 66 47 chr10 41225067 41225491 -99091274 - MSTB1 LTR MaLR 0 432 1 2158 224 64 77 chr10 41225491 41225738 -99091027 + L1ME2 LINE L1 5710 5944 -220 682 138 147 0 chr10 41225738 41225854 -99090911 + FLAM_C SINE Alu 1 133 0 2158 224 64 77 chr10 41225854 41225965 -99090800 + L1ME2 LINE L1 5944 6055 -109 7317 42 10 5 chr10 41225977 41226859 -99089906 - L1PA6 LINE L1 -6 6148 5262 300 244 47 87 chr10 41226857 41226916 -99089849 + L1ME1 LINE L1 6043 6103 -61 * 1971 152 52 33 chr10 41226916 41227284 -99089481 - THE1C LTR MaLR 0 375 1 300 244 47 87 chr10 41227284 41227351 -99089414 + L1ME1 LINE L1 6103 6164 0 43207 36 23 2 chr10 41228931 41234952 -99081813 - L1PA2 LINE L1 0 6155 1 38 39 0 0 chr10 41237637 41237689 -99079076 + AT_rich Low_complexity Low_complexity 1 52 0 2300 107 7 0 chr10 41237773 41238083 -99078682 + AluSp SINE Alu 1 312 -1 25 0 0 0 chr10 41238217 41238242 -99078523 + AT_rich Low_complexity Low_complexity 1 25 0 2147 115 3 0 chr10 41238279 41238574 -99078191 - AluSx SINE Alu -16 296 1 2200 108 0 3 chr10 41238574 41238860 -99077905 - AluSx SINE Alu -23 289 5 416 240 0 3 chr10 41240309 41240416 -99076349 + MER2 DNA MER2_type 1 106 -133 673 250 43 0 chr10 41240430 41240621 -99076144 + L1MC4a LINE L1 831 1042 -5381 1044 254 124 39 chr10 41240710 41241282 -99075483 + L1MC4a LINE L1 2047 2667 -4455 1174 185 59 8 chr10 41241288 41241526 -99075239 + AluJb SINE Alu 54 303 -9 429 232 16 24 chr10 41241564 41241689 -99075076 + L1MC4a LINE L1 2693 2816 -4306 544 78 0 165 chr10 41241693 41241796 -99074969 - Tigger4(Zombi) DNA MER2_type 0 2731 2646 2135 132 132 5 chr10 41241833 41242204 -99074561 + MSTA LTR MaLR 1 418 -10 1290 142 49 0 chr10 41242244 41242448 -99074317 - Tigger4(Zombi) DNA MER2_type -2517 214 1 243 275 90 6 chr10 41242469 41242636 -99074129 + L1MC4a LINE L1 2840 3020 -4102 787 128 0 2 chr10 41242641 41242893 -99073872 + AluSx SINE Alu 1 301 -9 774 231 140 24 chr10 41242894 41242955 -99073810 + L1MC4a LINE L1 2977 3030 -3911 2260 107 3 3 chr10 41242955 41243255 -99073510 + AluSg SINE Alu 1 300 -10 774 231 140 24 chr10 41243255 41243522 -99073243 + L1MC4a LINE L1 3030 3343 -3598 246 321 99 43 chr10 41244004 41244378 -99072387 - HAL1b LINE L1 -876 472 78 1992 139 7 7 chr10 41244453 41244748 -99072017 - AluSx SINE Alu -17 295 1 2037 290 97 33 chr10 41245895 41246442 -99070323 + L2 LINE L2 1982 2492 -821 2185 117 0 7 chr10 41246442 41246740 -99070025 - AluSx SINE Alu -16 296 1 2037 290 97 33 chr10 41246740 41247414 -99069351 + L2 LINE L2 2492 3282 -31 2256 105 7 3 chr10 41247435 41247739 -99069026 - AluSx SINE Alu -7 305 1 2461 80 3 0 chr10 41248989 41249288 -99067477 - AluSp SINE Alu -13 300 1 1081 254 45 89 chr10 41249606 41249797 -99066968 + L1MC4a LINE L1 4929 5127 -1814 2158 113 0 0 chr10 41249797 41250097 -99066668 + AluY SINE Alu 1 300 -11 1081 254 45 89 chr10 41250097 41250110 -99066655 + L1MC4a LINE L1 5127 5139 -1802 2295 103 7 0 chr10 41250110 41250411 -99066354 + AluSp SINE Alu 1 303 -10 1081 254 45 89 chr10 41250411 41250487 -99066278 + L1MC4a LINE L1 5139 5217 -1724 2384 90 0 0 chr10 41250487 41250786 -99065979 + AluY SINE Alu 1 299 -12 1081 254 45 89 chr10 41250786 41251065 -99065700 + L1MC4a LINE L1 5217 5465 -1476 2022 99 53 0 chr10 41251065 41251348 -99065417 + AluSg SINE Alu 1 298 -12 839 163 0 14 chr10 41251395 41251536 -99065229 + AluSg/x SINE Alu 137 275 -37 207 0 0 0 chr10 41251544 41251567 -99065198 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 24 32 0 0 chr10 41251579 41251610 -99065155 + AT_rich Low_complexity Low_complexity 1 31 0 1323 210 241 22 chr10 41251730 41251903 -99064862 + MLT1E1 LTR MaLR 93 227 -427 2361 77 0 0 chr10 41251903 41252189 -99064576 + AluSg SINE Alu 1 286 -24 1323 210 241 22 chr10 41252189 41252476 -99064289 + MLT1E1 LTR MaLR 227 654 0 941 278 71 22 chr10 41252482 41253137 -99063628 + L1MC4a LINE L1 5524 6214 -745 2252 123 0 0 chr10 41253312 41253622 -99063143 + AluSg SINE Alu 1 310 0 252 162 15 73 chr10 41253622 41253690 -99063075 + L1MC4 LINE L1 7475 7538 -504 243 254 30 15 chr10 41253718 41253785 -99062980 - MER5B DNA MER1_type -110 68 1 1690 197 3 7 chr10 41253911 41254210 -99062555 - AluJo SINE Alu -14 298 1 2127 112 0 11 chr10 41254385 41254520 -99062245 + AluSx SINE Alu 1 136 -172 2108 126 3 10 chr10 41254520 41254829 -99061936 + AluSg SINE Alu 1 307 -3 2127 112 0 11 chr10 41254829 41255004 -99061761 + AluSx SINE Alu 136 308 0 1226 299 88 48 chr10 41255029 41255302 -99061463 + L1MC4a LINE L1 6204 6464 -2139 2246 95 9 25 chr10 41255302 41255619 -99061146 + AluSx SINE Alu 1 312 0 1226 299 88 48 chr10 41255619 41256352 -99060413 + L1MC4a LINE L1 6464 7251 -1352 1943 131 0 17 chr10 41256398 41256535 -99060230 + AluSx SINE Alu 1 139 -167 1862 116 0 58 chr10 41256535 41256829 -99059936 + AluSq SINE Alu 23 299 -14 1943 131 0 17 chr10 41256829 41257002 -99059763 + AluSx SINE Alu 139 306 0 2378 78 3 0 chr10 41257002 41257298 -99059467 + AluSp SINE Alu 2 298 -15 253 263 82 82 chr10 41257402 41257533 -99059232 + L1ME LINE L1 5386 5519 -602 2479 79 0 0 chr10 41257533 41257837 -99058928 + AluY SINE Alu 1 304 -7 253 263 82 82 chr10 41257837 41257876 -99058889 + L1ME LINE L1 5518 5556 -565 1717 146 14 22 chr10 41257913 41258188 -99058577 - AluJo SINE Alu -39 273 1 298 268 183 0 chr10 41258220 41258362 -99058403 + L1ME LINE L1 5691 5858 -304 1959 168 124 24 chr10 41258570 41259029 -99057736 + MLT1D LTR MaLR 1 505 0 536 286 78 10 chr10 41259224 41259430 -99057335 + L1MB5 LINE L1 7 226 -6316 1828 166 12 98 chr10 41259436 41259700 -99057065 - MLT1B LTR MaLR 0 390 175 2221 150 132 11 chr10 41259700 41260079 -99056686 + MSTA LTR MaLR 1 425 -3 1828 166 12 98 chr10 41260079 41260241 -99056524 - MLT1B LTR MaLR -215 175 1 767 226 77 39 chr10 41260425 41260659 -99056106 + L1MB5 LINE L1 451 693 -5849 4630 188 50 17 chr10 41260661 41260761 -99056004 + L1MB5 LINE L1 4685 4780 -1892 2371 104 0 0 chr10 41260761 41261070 -99055695 + AluSc SINE Alu 1 309 0 4630 188 50 17 chr10 41261070 41262608 -99054157 + L1MB5 LINE L1 4780 6381 -291 831 153 94 53 chr10 41262613 41262775 -99053990 + AluJo SINE Alu 125 296 -16 1401 181 40 0 chr10 41262775 41263052 -99053713 + L1MB5 LINE L1 6377 6664 -8 2243 102 0 10 chr10 41263478 41263791 -99052974 + AluSg SINE Alu 1 310 0 236 188 0 94 chr10 41263971 41264067 -99052698 + L1MC4 LINE L1 6614 6700 -1342 218 152 0 22 chr10 41264086 41264132 -99052633 + (TA)n Simple_repeat Simple_repeat 1 45 0 290 256 427 0 chr10 41264181 41264298 -99052467 + MER5A DNA MER1_type 23 189 0 266 231 77 22 chr10 41265049 41265140 -99051625 + MIR SINE MIR 25 120 -88 2387 43 43 70 chr10 41265640 41265985 -99050780 - LTR2B LTR ERV1 -154 336 1 694 109 10 0 chr10 41265985 41266079 -99050686 - MSTA LTR MaLR -331 97 3 654 215 96 28 chr10 41266406 41266678 -99050087 - MLT2D LTR ERVL -73 341 1 2440 92 0 3 chr10 41266860 41267166 -99049599 + AluSg SINE Alu 1 305 -5 2324 108 0 0 chr10 41267166 41267463 -99049302 + AluSx SINE Alu 1 297 -15 2127 209 22 15 chr10 41267465 41267502 -99049263 - MSTD-int LTR MaLR -1269 466 431 1588 115 0 41 chr10 41267502 41267745 -99049020 + AluSq SINE Alu 66 298 -15 2127 209 22 15 chr10 41267745 41268166 -99048599 - MSTD-int LTR MaLR -1304 431 5 1623 186 114 17 chr10 41268172 41268219 -99048546 - MSTD LTR MaLR 0 396 355 2348 163 58 15 chr10 41268219 41268629 -99048136 - MSTA LTR MaLR 0 428 1 1623 186 114 17 chr10 41268629 41268942 -99047823 - MSTD LTR MaLR -41 355 1 1313 199 38 76 chr10 41268943 41269090 -99047675 + L1M4 LINE L1 4795 4946 -1200 2341 88 19 0 chr10 41269090 41269397 -99047368 + AluSq SINE Alu 1 313 0 1313 199 38 76 chr10 41269397 41269672 -99047093 + L1M4 LINE L1 4946 5201 -945 1991 134 0 3 chr10 41269680 41269996 -99046769 + AluSq SINE Alu 1 315 0 997 133 0 78 chr10 41269996 41270176 -99046589 + MER4A LTR ERV1 397 562 -102 783 183 86 46 chr10 41270176 41270351 -99046414 - AluSg1 SINE Alu -126 183 2 258 180 40 0 chr10 41270354 41270404 -99046361 + MER4A LTR ERV1 613 664 0 579 197 98 0 chr10 41270408 41270540 -99046225 + L1MC4a LINE L1 7083 7227 -581 374 191 225 0 chr10 41270541 41270630 -99046135 + MLT1F1 LTR MaLR 1 109 -458 836 148 93 38 chr10 41270640 41270689 -99046076 + L1MD3 LINE L1 7401 7446 -549 1069 207 132 88 chr10 41270689 41271075 -99045690 - MER57A LTR ERV1 0 403 1 836 148 93 38 chr10 41271075 41271208 -99045557 + L1MD3 LINE L1 7446 7593 -402 1055 203 37 164 chr10 41271218 41271907 -99044858 - LTR8A LTR ERV1 -13 714 138 438 151 55 14 chr10 41271908 41271981 -99044784 + AluS SINE Alu 2 77 -236 1662 167 60 18 chr10 41271993 41272087 -99044678 + L1MD3 LINE L1 7647 7736 -259 6242 62 33 4 chr10 41272087 41272845 -99043920 + LTR17 LTR ERV1 1 780 0 1662 167 60 18 chr10 41272845 41273085 -99043680 + L1MD3 LINE L1 7736 7995 0 384 259 76 15 chr10 41273621 41273752 -99043013 - MIR SINE MIR -13 249 111 225 286 0 0 chr10 41274397 41274460 -99042305 + MIR SINE MIR 119 181 -81 221 322 58 50 chr10 41274984 41275105 -99041660 - MIR SINE MIR -62 146 25 553 214 53 30 chr10 41276633 41276764 -99040001 + MER94 DNA DNA 1 134 0 257 259 25 12 chr10 41276948 41277029 -99039736 - MER5A DNA MER1_type -80 109 28 1158 283 165 9 chr10 41277034 41277561 -99039204 - L1MC4a LINE L1 -1904 5973 5365 279 276 68 45 chr10 41277592 41277856 -99038909 - L1MC4a LINE L1 -905 5310 5041 638 266 119 40 chr10 41277869 41278259 -99038506 - L1MC4a LINE L1 -4417 1979 1621 2140 103 0 7 chr10 41278259 41278560 -99038205 + AluSx SINE Alu 1 299 -13 638 266 119 40 chr10 41278560 41278794 -99037971 - L1MC4a LINE L1 -4775 1621 1292 1995 84 62 7 chr10 41278794 41279068 -99037697 + AluSc SINE Alu 1 289 -20 638 266 119 40 chr10 41279068 41279141 -99037624 - L1MC4a LINE L1 -5104 1292 1226 359 149 37 0 chr10 41279194 41279301 -99037464 + (TA)n Simple_repeat Simple_repeat 2 112 0 298 146 0 0 chr10 41279307 41279348 -99037417 - Alu SINE Alu -22 280 240 1585 170 91 87 chr10 41279352 41279678 -99037087 - L1MD2 LINE L1 -253 6106 5783 2392 85 3 0 chr10 41279678 41279973 -99036792 - AluSp SINE Alu -17 296 1 1585 170 91 87 chr10 41279973 41280285 -99036480 - L1MD2 LINE L1 -576 5783 5330 3215 129 42 2 chr10 41280322 41280830 -99035935 - MER34B LTR ERV1 -55 510 1 2296 229 41 34 chr10 41280836 41281544 -99035221 - L1MD2 LINE L1 -844 5302 4590 2120 127 0 7 chr10 41281857 41282149 -99034616 - AluSg SINE Alu -20 290 1 2080 91 7 20 chr10 41282243 41282540 -99034225 - AluY SINE Alu -18 293 1 857 214 22 56 chr10 41282609 41282787 -99033978 - FRAM SINE Alu -4 172 1 285 318 75 16 chr10 41282788 41283043 -99033722 - HAL1 LINE L1 -1427 1080 811 2111 113 3 13 chr10 41283336 41283637 -99033128 - AluSx SINE Alu -14 298 1 1938 128 7 26 chr10 41283645 41283950 -99032815 - AluSx SINE Alu -13 299 1 516 224 128 32 chr10 41284035 41284254 -99032511 - L1MC5 LINE L1 -30 7931 7692 783 235 47 13 chr10 41284288 41284522 -99032243 - L1MC4 LINE L1 -59 7983 7742 517 136 12 0 chr10 41284650 41284731 -99032034 + AluS SINE Alu 223 304 -6 910 166 57 0 chr10 41284731 41284888 -99031877 + AluSg/x SINE Alu 118 283 -27 561 198 246 73 chr10 41284912 41285272 -99031493 - L1MC5 LINE L1 -274 7687 7228 1546 181 9 48 chr10 41285272 41285587 -99031178 - AluJo SINE Alu -9 303 1 561 198 246 73 chr10 41285587 41285690 -99031075 - L1MC5 LINE L1 -733 7228 7144 1263 225 8 16 chr10 41285692 41285950 -99030815 - LTR39 LTR ERV1 0 783 528 325 222 74 22 chr10 41285956 41286091 -99030674 - L1ME LINE L1 -591 5571 5430 370 303 130 30 chr10 41286202 41286433 -99030332 - L1MEc LINE L1 -4602 1794 1541 341 152 0 15 chr10 41286553 41286619 -99030146 - L1M4c LINE L1 -3940 2706 2642 1653 179 13 22 chr10 41286621 41286934 -99029831 + AluJb SINE Alu 1 310 -2 546 206 29 6 chr10 41286939 41287109 -99029656 + GA-rich Low_complexity Low_complexity 5 178 0 1779 226 193 26 chr10 41287134 41287858 -99028907 - L1M4c LINE L1 -3999 2647 1803 2206 254 90 46 chr10 41287867 41288562 -99028203 - L1M4c LINE L1 -4926 1720 1058 2070 92 75 20 chr10 41288562 41288855 -99027910 - AluSc SINE Alu 0 309 1 2206 254 90 46 chr10 41288855 41289763 -99027002 - L1M4c LINE L1 -5588 1058 3 3950 141 108 9 chr10 41289809 41290566 -99026199 - L1MC3 LINE L1 -9 8012 7181 794 178 89 23 chr10 41290995 41291209 -99025556 - L1MC3 LINE L1 -802 7219 6992 1180 131 17 0 chr10 41291209 41291385 -99025380 - AluSg/x SINE Alu -3 309 131 1472 208 57 6 chr10 41291389 41291845 -99024920 - L1MC3 LINE L1 -743 5639 5356 1424 233 54 32 chr10 41291818 41292406 -99024359 - L1MC3 LINE L1 -3128 3254 2654 * 275 259 0 0 chr10 41292384 41292465 -99024300 - L1MC3 LINE L1 -5258 1126 1046 * 324 70 0 0 chr10 41292472 41292515 -99024250 + (TG)n Simple_repeat Simple_repeat 2 44 0 302 275 0 0 chr10 41292584 41292664 -99024101 - L1MC3 LINE L1 -1037 6748 6669 1606 255 46 5 chr10 41292667 41293108 -99023657 - MER68 LTR ERV1 -73 532 1 225 293 0 14 chr10 41293126 41293273 -99023492 - L1MC3 LINE L1 -5247 1125 981 309 348 9 17 chr10 41293636 41293751 -99023014 + L2 LINE L2 3136 3249 -23 2111 110 0 4 chr10 41294603 41294915 -99021850 + AluSc SINE Alu 1 311 0 300 158 0 0 chr10 41295207 41295264 -99021501 + (TG)n Simple_repeat Simple_repeat 2 58 0 1520 296 89 30 chr10 41295308 41296218 -99020547 - L2 LINE L2 -163 3150 2176 443 268 0 0 chr10 41296218 41296330 -99020435 - MER58C DNA MER1_type 0 215 104 223 271 7 21 chr10 41296332 41296417 -99020348 + CT-rich Low_complexity Low_complexity 2 138 0 181 292 69 0 chr10 41296556 41296628 -99020137 - L2 LINE L2 -1230 2084 2008 180 111 0 0 chr10 41296956 41296983 -99019782 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 197 65 32 0 chr10 41297830 41297861 -99018904 + (TTA)n Simple_repeat Simple_repeat 1 32 0 280 273 0 0 chr10 41300941 41301008 -99015757 + (TA)n Simple_repeat Simple_repeat 2 71 -7 1789 160 117 10 chr10 41301008 41301401 -99015364 - MER63B DNA MER1_type -1 435 1 280 273 0 0 chr10 41301401 41301410 -99015355 + (TA)n Simple_repeat Simple_repeat 70 78 0 435 270 135 30 chr10 41302594 41302794 -99013971 - LTR33 LTR ERVL 0 521 301 286 221 221 45 chr10 41303646 41303800 -99012965 - L2 LINE L2 -169 3144 2964 226 300 73 0 chr10 41303846 41303956 -99012809 + MER112 DNA MER1_type 98 215 -45 236 250 46 40 chr10 41305921 41306073 -99010692 - L1ME LINE L1 -298 5823 5671 1850 179 0 7 chr10 41306273 41306574 -99010191 + AluJb SINE Alu 1 299 -13 2357 78 0 23 chr10 41307026 41307335 -99009430 + AluY SINE Alu 1 302 -9 1264 225 130 30 chr10 41307564 41308026 -99008739 + MLT2B2 LTR ERVL 1 508 -7 2176 136 0 0 chr10 41308137 41308446 -99008319 + AluSx SINE Alu 3 311 -1 2503 81 0 0 chr10 41308646 41308954 -99007811 - AluSc SINE Alu -1 308 1 1441 137 13 0 chr10 41309129 41309356 -99007409 - MER30 DNA MER1_type 0 230 1 28 29 0 0 chr10 41309413 41309448 -99007317 + AT_rich Low_complexity Low_complexity 1 35 0 596 297 43 5 chr10 41310557 41310742 -99006023 + MIR SINE MIR 1 192 -70 234 226 65 16 chr10 41310821 41310883 -99005882 - L2 LINE L2 -82 3231 3167 401 230 0 0 chr10 41310892 41310966 -99005799 + L1M4b LINE L1 11 84 -6775 2386 82 0 19 chr10 41313791 41314108 -99002657 + AluY SINE Alu 1 311 0 2912 249 48 19 chr10 41314652 41315524 -99001241 + L1M4b LINE L1 90 986 -5873 * 7210 171 107 80 chr10 41315514 41316643 -99000122 + L1M4c LINE L1 157 1255 -5127 2172 113 10 16 chr10 41316643 41316953 -98999812 + AluSx SINE Alu 1 308 -4 7210 171 107 80 chr10 41316953 41318177 -98998588 + L1M4c LINE L1 1255 2445 -3937 14590 143 39 30 chr10 41318177 41319750 -98997015 - Tigger2 DNA MER2_type 0 2718 1161 2092 134 0 3 chr10 41319750 41320048 -98996717 - AluJb SINE Alu -10 302 6 14590 143 39 30 chr10 41320048 41320134 -98996631 - Tigger2 DNA MER2_type -1557 1161 1077 1748 169 6 44 chr10 41320134 41320454 -98996311 - AluJb SINE Alu -4 308 1 14590 143 39 30 chr10 41320454 41320542 -98996223 - Tigger2 DNA MER2_type -1641 1077 991 196 51 26 26 chr10 41320542 41320581 -98996184 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 14590 143 39 30 chr10 41320581 41321524 -98995241 - Tigger2 DNA MER2_type -1727 991 1 7210 171 107 80 chr10 41321524 41321833 -98994932 + L1M4c LINE L1 2445 2887 -3495 231 226 43 0 chr10 41422058 41422112 -98894653 - MER5A DNA MER1_type -82 106 41 2102 129 0 0 chr10 41422262 41422556 -98894209 + AluSx SINE Alu 1 294 -18 24 0 0 0 chr10 41422556 41422580 -98894185 + AT_rich Low_complexity Low_complexity 1 24 0 979 143 0 0 chr10 41424626 41424773 -98891992 - L1PA16 LINE L1 -9 6157 6011 2073 146 10 0 chr10 41425662 41425970 -98890795 - AluSx SINE Alu -1 311 1 1743 125 91 8 chr10 41426071 41426355 -98890410 + AluSg1 SINE Alu 1 309 0 1912 112 72 0 chr10 41426631 41426909 -98889856 + AluSq SINE Alu 1 298 -15 1938 118 7 4 chr10 41427253 41427525 -98889240 + AluSx SINE Alu 1 273 -39 186 43 0 0 chr10 41427533 41427556 -98889209 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2607 71 0 0 chr10 41429590 41429901 -98886864 - AluY SINE Alu 0 311 1 787 103 0 28 chr10 41429901 41430008 -98886757 - FRAM SINE Alu -19 157 54 907 197 11 115 chr10 41430268 41430641 -98886124 - MLT1A1 LTR MaLR 0 396 39 1777 117 24 0 chr10 41430649 41430918 -98885847 - AluSx SINE Alu 0 301 27 240 128 106 21 chr10 41430922 41430969 -98885796 - AluSx SINE Alu -251 51 1 * 256 111 0 44 chr10 41430969 41431010 -98885755 - MLT1A1 LTR MaLR -386 42 4 1801 262 39 0 chr10 41431940 41432429 -98884336 - LTR53 LTR ERVL -1 518 11 2389 173 69 32 chr10 41432591 41433095 -98883670 - L1MC2 LINE L1 -11 6333 5811 * 3509 230 111 34 chr10 41433080 41433846 -98882919 - L1M4 LINE L1 -1819 4327 3435 2002 127 0 20 chr10 41433846 41434138 -98882627 - AluSg SINE Alu -24 286 1 3509 230 111 34 chr10 41434138 41434566 -98882199 - L1M4 LINE L1 -2711 3435 3041 365 262 57 8 chr10 41434969 41435091 -98881674 + Zaphod DNA AcHobo 3904 4031 0 243 88 0 0 chr10 41435476 41435510 -98881255 + (CA)n Simple_repeat Simple_repeat 1 34 0 337 253 98 41 chr10 41435510 41435688 -98881077 + L1MD3 LINE L1 6153 7796 -12 191 35 0 35 chr10 41438416 41438445 -98878320 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 1045 229 102 23 chr10 41439042 41439466 -98877299 + MLT1B LTR MaLR 1 390 0 31 26 0 0 chr10 41439616 41439654 -98877111 + AT_rich Low_complexity Low_complexity 1 38 0 1767 250 67 59 chr10 41439895 41440763 -98876002 - L1M4 LINE L1 -1404 4742 3868 4153 181 73 33 chr10 41440783 41441813 -98874952 - MER45R DNA AcHobo 0 1581 511 1941 128 3 17 chr10 41542178 41542314 -98774451 + AluSx SINE Alu 1 137 -175 1941 114 8 0 chr10 41542314 41542576 -98774189 + AluSq SINE Alu 39 302 -11 1941 128 3 17 chr10 41542576 41542728 -98774037 + AluSx SINE Alu 137 285 -27 348 24 0 0 chr10 41542746 41542757 -98774008 + (TG)n Simple_repeat Simple_repeat 1 52 0 348 24 0 0 chr10 41542757 41542798 -98773967 + (TG)n Simple_repeat Simple_repeat 2 42 0 461 230 133 12 chr10 41543019 41543184 -98773581 - MLT1C LTR MaLR 0 467 283 3146 112 27 33 chr10 41544424 41544631 -98772134 + MER49 LTR ERV1 1 208 -715 2434 78 3 0 chr10 41544631 41544927 -98771838 + AluY SINE Alu 1 297 -14 3146 112 27 33 chr10 41544927 41545230 -98771535 + MER49 LTR ERV1 208 508 -415 683 218 83 10 chr10 41545500 41545693 -98771072 + L1MC2 LINE L1 6138 6344 0 337 332 80 36 chr10 41546339 41546589 -98770176 + MIR SINE MIR 1 261 -1 250 318 9 36 chr10 41546784 41546894 -98769871 - MIR SINE MIR -61 147 41 2593 162 31 0 chr10 41547168 41547582 -98769183 - MSTA LTR MaLR -1 427 1 9505 165 31 28 chr10 41547582 41548819 -98767946 - MSTA-int LTR MaLR 0 1651 406 1454 192 91 0 chr10 41548819 41549105 -98767660 - AluJb SINE Alu 0 312 1 9505 165 31 28 chr10 41549105 41549513 -98767252 - MSTA-int LTR MaLR -1245 406 1 266 128 0 0 chr10 41549513 41549552 -98767213 - MSTA LTR MaLR 0 428 390 2305 97 0 0 chr10 41549552 41549840 -98766925 + AluSg SINE Alu 1 288 -22 2069 153 114 0 chr10 41549885 41550245 -98766520 - MSTA LTR MaLR -27 401 1 412 138 0 53 chr10 41550504 41550598 -98766167 - LTR49-int LTR ERV1 -2782 3816 3728 613 51 39 13 chr10 41550667 41550745 -98766020 - MADE1 DNA Mariner 0 80 1 502 233 61 28 chr10 41550756 41550936 -98765829 - LTR49-int LTR ERV1 -2868 3730 3545 326 173 12 37 chr10 41551018 41551099 -98765666 - LTR49-int LTR ERV1 -4274 2484 2406 213 39 0 0 chr10 41551130 41551156 -98765609 + (T)n Simple_repeat Simple_repeat 1 26 0 614 166 40 108 chr10 41552152 41552375 -98764390 - LTR49-int LTR ERV1 -2486 3845 3638 299 331 17 6 chr10 41552429 41552604 -98764161 - L1M4 LINE L1 -2396 3750 3574 495 287 96 56 chr10 41552614 41553115 -98763650 - HSATI Satellite Satellite -13 564 44 32 26 0 0 chr10 41553333 41553372 -98763393 + AT_rich Low_complexity Low_complexity 1 39 0 373 141 113 0 chr10 41553600 41553671 -98763094 + MSTD LTR MaLR 316 394 -2 3827 45 5 1 chr10 41553678 41554191 -98762574 + L1PA4 LINE L1 5608 6128 -27 207 0 0 0 chr10 41554626 41554649 -98762116 + (TG)n Simple_repeat Simple_repeat 2 24 0 185 278 42 0 chr10 41554929 41555001 -98761764 + MIR SINE MIR 178 252 -10 600 290 67 9 chr10 41555186 41555689 -98761076 - MLT1G LTR MaLR -29 561 1 1030 145 38 0 chr10 41555725 41555884 -98760881 - L1PA12 LINE L1 -5468 2113 1949 1680 107 25 0 chr10 41555884 41556127 -98760638 + L1PA13 LINE L1 5915 6163 0 5948 117 34 28 chr10 41556385 41556407 -98760358 - MER49 LTR ERV1 -4 919 899 2403 96 0 0 chr10 41556407 41556710 -98760055 + AluSq SINE Alu 1 303 -10 5948 117 34 28 chr10 41556710 41557601 -98759164 - MER49 LTR ERV1 -24 899 1 2429 195 60 39 chr10 41557928 41558573 -98758192 - HERVL68 LTR ERVL -1785 1252 594 293 291 0 58 chr10 41558723 41558809 -98757956 - HERVL68 LTR ERVL -2611 426 346 1584 155 7 69 chr10 41558845 41559136 -98757629 + AluJo SINE Alu 1 273 -39 2044 217 100 14 chr10 41559150 41559674 -98757091 - MER68 LTR ERV1 0 562 11 2050 128 3 13 chr10 41559686 41559990 -98756775 - AluSc SINE Alu -8 301 1 2065 125 7 10 chr10 41560390 41560694 -98756071 + AluSx SINE Alu 1 303 -9 1500 154 135 0 chr10 41562005 41562271 -98754494 + AluSx SINE Alu 1 302 -10 1993 145 0 3 chr10 41563501 41563804 -98752961 + AluSx SINE Alu 1 302 -10 2412 89 0 0 chr10 41563856 41564160 -98752605 + AluSg SINE Alu 1 304 -6 24 0 0 0 chr10 41564379 41564403 -98752362 + AT_rich Low_complexity Low_complexity 1 24 0 1676 127 14 40 chr10 41564410 41564526 -98752239 - L1PB3 LINE L1 -9 6145 6028 2117 124 10 0 chr10 41564526 41564825 -98751940 - AluSq SINE Alu -11 302 1 1676 127 14 40 chr10 41564825 41564983 -98751782 - L1PB3 LINE L1 -126 6028 5878 1852 108 87 17 chr10 41567159 41567447 -98749318 + AluSg SINE Alu 1 308 -2 1343 221 111 3 chr10 41567995 41568302 -98748463 + MER58B DNA MER1_type 2 341 0 2427 82 0 19 chr10 41568552 41568868 -98747897 + AluSg SINE Alu 1 310 0 3070 164 26 56 chr10 41569035 41569657 -98747108 - L1MB5 LINE L1 -6 6168 5566 728 202 85 48 chr10 41569659 41569931 -98746834 - L1MB5 LINE L1 -1475 4671 4390 835 194 31 6 chr10 41569931 41570091 -98746674 + MER58B DNA MER1_type 139 302 -39 928 224 122 11 chr10 41570101 41570387 -98746378 - L1MB5 LINE L1 -1752 4394 4077 4423 189 36 25 chr10 41570397 41571188 -98745577 - L1MB2 LINE L1 -36 6633 5675 8594 75 11 5 chr10 41571188 41572252 -98744513 - MER11C LTR ERVK 0 1071 1 4423 189 36 25 chr10 41572252 41572816 -98743949 - L1MB2 LINE L1 -994 5675 5119 3698 239 60 50 chr10 41572815 41573067 -98743698 - L1MB2 LINE L1 -3706 2938 2690 * 2189 109 0 43 chr10 41573067 41573389 -98743376 - AluSg SINE Alu -2 308 1 3698 239 60 50 chr10 41573389 41575596 -98741169 - L1MB2 LINE L1 -3954 2690 330 1594 200 66 132 chr10 41575717 41576232 -98740533 - L1MC4 LINE L1 -881 6927 6447 2403 99 3 0 chr10 41576255 41576559 -98740206 - AluSp SINE Alu -8 305 1 653 174 65 14 chr10 41576848 41576986 -98739779 - MLT1A1 LTR MaLR -220 145 1 1356 235 60 22 chr10 41576986 41577403 -98739362 - L1M4 LINE L1 -1729 4915 4483 * 30632 94 12 10 chr10 41577397 41582749 -98734016 + L1PA7 LINE L1 795 6154 0 439 143 52 0 chr10 41582750 41582827 -98733938 - L1MA3 LINE L1 -193 6112 6032 1007 207 64 0 chr10 41582961 41583164 -98733601 - L1M4 LINE L1 -4631 2015 1800 794 64 0 0 chr10 41583169 41583263 -98733502 - AluY SINE Alu -16 295 202 619 214 35 151 chr10 41583268 41583627 -98733138 - L1M4 LINE L1 -5621 936 644 899 68 83 30 chr10 41583627 41583759 -98733006 - MER85 DNA T2_type 0 139 1 619 214 35 151 chr10 41583759 41583790 -98732975 - L1M4 LINE L1 -5913 644 611 710 31 21 0 chr10 41583985 41584081 -98732684 + (TTTTC)n Simple_repeat Simple_repeat 3 100 0 2102 108 7 0 chr10 41584082 41584360 -98732405 - AluSq SINE Alu -33 280 1 1646 147 0 0 chr10 41584460 41584705 -98732060 - AluSx SINE Alu -5 307 63 438 174 35 0 chr10 41585187 41585273 -98731492 + Charlie7 DNA MER1_type 51 139 -2473 28 29 0 0 chr10 41585285 41585320 -98731445 + AT_rich Low_complexity Low_complexity 1 35 0 450 0 0 0 chr10 41586321 41586371 -98730394 + (TG)n Simple_repeat Simple_repeat 2 51 0 346 246 25 68 chr10 41586752 41586919 -98729846 - L1ME3 LINE L1 0 6164 5990 1427 178 13 80 chr10 41587023 41587337 -98729428 + AluJb SINE Alu 3 295 -17 1933 174 0 0 chr10 41588081 41588368 -98728397 + AluSx SINE Alu 1 287 -25 180 0 0 0 chr10 41588368 41588388 -98728377 + (CCA)n Simple_repeat Simple_repeat 1 20 0 2042 144 20 0 chr10 41591401 41591700 -98725065 + AluSx SINE Alu 1 305 -7 725 240 65 26 chr10 41592282 41592580 -98724185 + L1 LINE L1 3483 3794 -2352 986 239 217 3 chr10 41592836 41593209 -98723556 + L1MC4 LINE L1 6461 6913 -1129 1833 175 7 7 chr10 41593210 41593513 -98723252 + AluJb SINE Alu 1 303 -9 282 145 65 16 chr10 41593513 41593575 -98723190 + L1MC/D LINE L1 5744 5808 -525 * 3168 175 36 2 chr10 41593563 41594176 -98722589 + L1 LINE L1 4610 5243 -903 1440 163 55 4 chr10 41594176 41594433 -98722332 - MSTA LTR MaLR 0 428 159 855 83 16 0 chr10 41594447 41594568 -98722197 + L1MA3 LINE L1 6183 6305 0 605 225 31 8 chr10 41594716 41594845 -98721920 - MSTA LTR MaLR -294 132 1 6410 95 65 7 chr10 41594860 41595854 -98720911 + L1MA3 LINE L1 5254 6305 0 229 250 240 0 chr10 41596023 41596123 -98720642 + L1M4 LINE L1 4542 4665 -1481 593 204 36 149 chr10 41596251 41596559 -98720206 + L1M4 LINE L1 4965 5237 -909 1432 142 118 146 chr10 41596930 41597004 -98719761 + LOR1a LTR ERV1 1 76 -421 1847 143 156 45 chr10 41597004 41597383 -98719382 - MSTA LTR MaLR -4 424 4 1432 142 118 146 chr10 41597383 41597800 -98718965 + LOR1a LTR ERV1 76 478 -19 2318 90 0 0 chr10 41600017 41600306 -98716459 - AluSg SINE Alu -21 289 1 375 110 8 11 chr10 41600506 41600577 -98716188 + Alu SINE Alu 248 299 -3 579 108 11 0 chr10 41600583 41600676 -98716089 - L1PA15 LINE L1 -1 6164 6071 894 97 8 0 chr10 41600678 41600802 -98715963 - L1PA15 LINE L1 -159 6006 5882 485 46 31 0 chr10 41600816 41600881 -98715884 + MER41A LTR ERV1 400 466 -88 5254 237 54 16 chr10 41601123 41601710 -98715055 - L1MB4 LINE L1 -3 6413 5850 2017 143 0 29 chr10 41601710 41602024 -98714741 - AluSx SINE Alu -7 305 1 5254 237 54 16 chr10 41602024 41603800 -98712965 - L1MB4 LINE L1 -566 5850 3946 1264 171 46 0 chr10 41603800 41604040 -98712725 + Tigger5 DNA MER2_type 2073 2323 0 1234 257 39 25 chr10 41604040 41604557 -98712208 - L1MB4 LINE L1 -3512 2870 2347 5127 58 2 3 chr10 41604569 41605170 -98711595 - L1PA5 LINE L1 -1 6153 5554 6611 112 0 11 chr10 41605170 41606123 -98710642 - L1P LINE L1 -4627 1519 578 4919 233 109 31 chr10 41606118 41606359 -98710406 - L1MB4 LINE L1 -4029 2355 2134 * 2305 104 0 3 chr10 41606359 41606656 -98710109 + AluSc SINE Alu 1 296 -13 4919 233 109 31 chr10 41606656 41606842 -98709923 - L1MB4 LINE L1 -4250 2134 1964 2130 123 70 25 chr10 41606842 41607201 -98709564 - THE1C LTR MaLR 0 375 1 4919 233 109 31 chr10 41607201 41607401 -98709364 - L1MB4 LINE L1 -4420 1964 1781 1894 137 0 36 chr10 41607401 41607708 -98709057 - AluSq SINE Alu -17 296 1 4919 233 109 31 chr10 41607708 41609162 -98707603 - L1MB4 LINE L1 -4603 1781 16 197 308 135 0 chr10 41610071 41610175 -98706590 + MIR3 SINE MIR 63 180 -28 2253 113 0 0 chr10 41610627 41610920 -98705845 - AluSc SINE Alu -16 293 1 2081 234 122 144 chr10 41611482 41612397 -98704368 + L1MC4a LINE L1 6272 7265 -543 596 236 0 0 chr10 41612397 41612520 -98704245 + MLT1F1 LTR MaLR 3 125 -442 2081 234 122 144 chr10 41612520 41613053 -98703712 + L1MC4a LINE L1 7265 7808 0 1812 150 0 0 chr10 41613082 41613349 -98703416 + AluSx SINE Alu 1 267 -45 1290 231 117 2 chr10 41613912 41614324 -98702441 - L1MDa LINE L1 -4112 2428 1970 2100 134 0 10 chr10 41617069 41617376 -98699389 + AluSx SINE Alu 1 304 -8 591 140 32 0 chr10 41617528 41617621 -98699144 - AluSp/q SINE Alu -10 303 208 263 128 26 0 chr10 41617621 41617660 -98699105 - Alu SINE Alu -262 40 1 200 329 63 0 chr10 41617701 41617780 -98698985 - MIR3 SINE MIR -25 183 100 288 267 13 0 chr10 41617805 41617880 -98698885 + Tigger2 DNA MER2_type 3 78 -2640 * 635 268 18 59 chr10 41617868 41618029 -98698736 - MER8 DNA MER2_type -28 211 60 2305 172 64 40 chr10 41618029 41618528 -98698237 - MER9 LTR ERVK 0 511 1 635 268 18 59 chr10 41618528 41618586 -98698179 - MER8 DNA MER2_type -179 60 1 247 263 88 25 chr10 41619439 41619519 -98697246 - MIR3 SINE MIR -46 162 78 2056 154 0 0 chr10 41620094 41620392 -98696373 - AluSx SINE Alu -14 298 1 386 333 42 48 chr10 41620621 41620826 -98695939 + L2 LINE L2 2946 3150 -163 2295 88 0 16 chr10 41620826 41621131 -98695634 - AluY SINE Alu -9 302 3 386 333 42 48 chr10 41621131 41621255 -98695510 + L2 LINE L2 3150 3273 -40 1115 177 60 41 chr10 41621807 41622073 -98694692 - MER92B LTR ERV1 -365 271 1 2150 118 0 3 chr10 41622484 41622827 -98693938 - AluSq SINE Alu 0 313 1 1689 200 7 0 chr10 41622941 41623251 -98693514 - AluSx SINE Alu 0 312 1 1378 97 0 78 chr10 41623399 41623605 -98693160 - AluSp SINE Alu -123 190 1 23 0 0 0 chr10 41623786 41623809 -98692956 + AT_rich Low_complexity Low_complexity 1 23 0 898 206 0 0 chr10 41624115 41624290 -98692475 + AluJb SINE Alu 137 311 -1 195 286 0 0 chr10 41625671 41625776 -98690989 + (TG)n Simple_repeat Simple_repeat 2 106 0 2373 89 0 6 chr10 41626466 41626780 -98689985 - AluSq SINE Alu 0 313 2 379 267 90 71 chr10 41626788 41627476 -98689289 + L1M4 LINE L1 3064 3764 -2382 478 286 32 7 chr10 41629169 41629323 -98687442 + MER58B DNA MER1_type 177 334 -7 2171 221 100 77 chr10 41630008 41630895 -98685870 - L1MC4a LINE L1 -1 7807 6900 1945 75 12 181 chr10 41630901 41631315 -98685450 - LTR14A LTR ERVK 0 344 1 2239 211 49 81 chr10 41631318 41631815 -98684950 - L1MC4a LINE L1 -909 6899 6428 216 0 0 0 chr10 41631815 41631839 -98684926 + (TG)n Simple_repeat Simple_repeat 2 25 0 2239 211 49 81 chr10 41631839 41632017 -98684748 - L1MC4a LINE L1 -1380 6428 6246 397 188 11 125 chr10 41632040 41632216 -98684549 - L1MC4a LINE L1 -1794 6014 5859 2297 116 0 3 chr10 41632376 41632687 -98684078 - AluSx SINE Alu -2 310 1 1584 143 4 15 chr10 41633050 41633309 -98683456 - AluSx SINE Alu -11 301 46 28 86 0 0 chr10 41633754 41633824 -98682941 + AT_rich Low_complexity Low_complexity 1 70 0 1244 251 88 47 chr10 41634248 41634805 -98681960 + L1MC5 LINE L1 6636 7215 -746 2950 128 40 5 chr10 41634807 41635253 -98681512 + MER4C LTR ERV1 1 462 -3 541 227 9 0 chr10 41635259 41635369 -98681396 + MSTD LTR MaLR 1 111 -285 225 133 83 67 chr10 41635371 41635431 -98681334 + L1MC5 LINE L1 7009 7069 -892 746 237 36 8 chr10 41635552 41635742 -98681023 + MSTD LTR MaLR 216 382 -14 341 69 0 17 chr10 41636163 41636221 -98680544 + (TG)n Simple_repeat Simple_repeat 2 58 0 2276 121 0 0 chr10 41636649 41636962 -98679803 - AluSq SINE Alu 0 313 1 306 0 0 0 chr10 41637160 41637194 -98679571 + (TG)n Simple_repeat Simple_repeat 2 35 0 2713 208 61 41 chr10 41638173 41638910 -98677855 - L1MC1 LINE L1 0 6333 5582 699 196 0 38 chr10 41638964 41639097 -98677668 - AluJb SINE Alu -164 148 21 540 235 76 34 chr10 41642042 41642228 -98674537 + MLT1J LTR MaLR 60 300 -211 347 265 14 82 chr10 41642258 41642405 -98674360 + L2 LINE L2 3136 3272 0 2367 97 0 0 chr10 41642678 41642977 -98673788 + AluSg SINE Alu 1 299 -11 290 291 81 0 chr10 41644310 41644396 -98672369 - L2 LINE L2 -24 3289 3197 2108 119 33 81 chr10 41645540 41645934 -98670831 + THE1C LTR MaLR 1 375 0 396 283 194 16 chr10 41645965 41646156 -98670609 + MIR SINE MIR 35 259 -3 1517 127 0 0 chr10 41648051 41648280 -98668485 + L1PA8 LINE L1 5937 6165 -7 707 173 0 58 chr10 41648871 41649010 -98667755 - FLAM_A SINE Alu -2 131 1 1928 186 70 15 chr10 41649978 41650375 -98666390 - MSTB LTR MaLR -7 419 1 310 194 56 0 chr10 41651626 41651698 -98665067 - HAL1 LINE L1 -335 2172 2097 435 348 26 49 chr10 41651975 41652242 -98664523 - HAL1 LINE L1 -548 1959 1699 648 272 181 53 chr10 41652288 41652762 -98664003 - HAL1 LINE L1 -904 1603 1069 328 209 164 18 chr10 41652766 41652876 -98663889 - HAL1 LINE L1 -1542 965 840 281 333 0 10 chr10 41652995 41653097 -98663668 - HAL1 LINE L1 -1832 675 575 1164 176 5 32 chr10 41653816 41654032 -98662733 + AluJo SINE Alu 87 296 -16 5343 155 34 9 chr10 41654155 41655805 -98660960 - L1PB1 LINE L1 -2 6149 4452 3092 204 1 8 chr10 41655798 41656504 -98660261 + L1PB1 LINE L1 3761 4461 -1685 * 26915 114 17 18 chr10 41658777 41664243 -98652522 + L1PA8 LINE L1 717 6168 -4 2147 125 3 0 chr10 41664249 41664567 -98652198 + AluSq SINE Alu 1 319 0 255 31 0 0 chr10 41664743 41664775 -98651990 + (CAA)n Simple_repeat Simple_repeat 1 32 0 582 251 39 45 chr10 41665299 41665478 -98651287 + MER5B DNA MER1_type 1 178 0 314 194 83 111 chr10 41665503 41665647 -98651118 + MIR3 SINE MIR 68 207 -1 22 0 0 0 chr10 41666046 41666068 -98650697 + AT_rich Low_complexity Low_complexity 1 22 0 1915 162 0 3 chr10 41666247 41666544 -98650221 + AluSx SINE Alu 1 296 -16 582 274 26 0 chr10 41667169 41667322 -98649443 - MER20 DNA MER1_type -3 216 60 1230 208 201 10 chr10 41667338 41667926 -98648839 - Charlie1 DNA MER1_type -181 2580 1881 1203 192 103 33 chr10 41667994 41668265 -98648500 - AluSq SINE Alu -23 290 1 1893 106 83 0 chr10 41668817 41669103 -98647662 - AluSq SINE Alu 0 308 1 2399 91 0 0 chr10 41669133 41669440 -98647325 - AluY SINE Alu 0 311 5 2303 106 0 7 chr10 41669767 41670070 -98646695 + AluSq SINE Alu 3 303 -10 285 291 35 0 chr10 41670120 41670206 -98646559 - MER3 DNA MER1_type -109 100 12 * 305 177 177 15 chr10 41670174 41670304 -98646461 + Charlie2 DNA MER1_type 2384 2534 -328 195 280 140 26 chr10 41671544 41671737 -98645028 - L2 LINE L2 -907 2407 2193 546 232 0 9 chr10 41671757 41671869 -98644896 + FLAM_A SINE Alu 1 111 -31 2181 91 0 0 chr10 41671869 41672191 -98644574 - AluY SINE Alu 0 327 6 1230 206 91 18 chr10 41672228 41672504 -98644261 + AluJo SINE Alu 1 296 -16 713 303 121 33 chr10 41672670 41673319 -98643446 - L2 LINE L2 -5 3308 2593 243 61 0 0 chr10 41674123 41674156 -98642609 + (T)n Simple_repeat Simple_repeat 1 33 0 9309 179 43 6 chr10 41674209 41676010 -98640755 + L1PB2 LINE L1 17 1884 -5681 2106 161 2 19 chr10 41676005 41676427 -98640338 + L1PB2 LINE L1 6018 6432 -1133 * 723 171 14 43 chr10 41676430 41676570 -98640195 + AluJ SINE Alu 1 136 -176 1305 211 37 6 chr10 41676571 41676921 -98639844 + L1PB2 LINE L1 6421 6781 -784 883 234 0 0 chr10 41676922 41677076 -98639689 + AluJ SINE Alu 133 286 -26 5127 117 34 25 chr10 41677078 41677667 -98639098 + L1MA3 LINE L1 5354 5957 -348 2246 112 0 0 chr10 41677667 41677972 -98638793 - AluSg SINE Alu -5 305 1 5127 117 34 25 chr10 41677972 41678318 -98638447 + L1MA3 LINE L1 5957 6298 -7 1911 159 80 1 chr10 41679026 41679525 -98637240 + L1PB2 LINE L1 6816 7366 -204 216 97 0 0 chr10 41679541 41679572 -98637193 + (CA)n Simple_repeat Simple_repeat 2 32 0 320 177 36 18 chr10 41680154 41680406 -98636359 + AluJb SINE Alu 2 306 0 2014 114 46 0 chr10 41683162 41683443 -98633322 + AluSg1 SINE Alu 1 294 -15 22 0 0 0 chr10 41684486 41684508 -98632257 + AT_rich Low_complexity Low_complexity 1 22 0 809 257 0 0 chr10 41684635 41684806 -98631959 - FAM SINE Alu -14 171 1 802 212 0 7 chr10 41684918 41685069 -98631696 + FAM SINE Alu 16 165 -20 270 85 0 0 chr10 41685781 41685828 -98630937 - AluSx SINE Alu 0 302 256 1144 135 6 6 chr10 41685828 41685998 -98630767 - AluSx SINE Alu -142 170 1 254 261 0 0 chr10 41686476 41686545 -98630220 - MER116 DNA Mariner -5 75 7 2293 111 0 0 chr10 41687192 41687489 -98629276 - AluSg SINE Alu -8 302 6 39740 62 4 1 chr10 41687523 41693655 -98623110 + L1PA5 LINE L1 1 6147 -7 195 280 27 27 chr10 41694693 41694768 -98621997 + MER5A DNA MER1_type 1 75 -114 706 229 109 5 chr10 41694768 41694969 -98621796 + L1MD3 LINE L1 7730 7951 -44 310 311 50 25 chr10 41694978 41695097 -98621668 + MER5A DNA MER1_type 55 176 -13 483 280 60 60 chr10 41695145 41695345 -98621420 - MIR SINE MIR -54 208 9 2325 72 0 31 chr10 41695504 41695825 -98620940 - AluY SINE Alu 0 311 1 192 284 42 74 chr10 41697626 41697721 -98619044 - L2 LINE L2 -81 3191 3100 263 27 0 27 chr10 41698068 41698105 -98618660 + (TTTTTA)n Simple_repeat Simple_repeat 4 39 0 279 0 0 0 chr10 41698292 41698323 -98618442 + (A)n Simple_repeat Simple_repeat 1 31 0 2204 119 3 0 chr10 41698384 41698687 -98618078 + AluSp SINE Alu 5 308 -5 1270 238 146 23 chr10 41698995 41699524 -98617241 - MER92B LTR ERV1 -10 626 33 487 263 47 32 chr10 41699548 41699738 -98617027 + MER21B LTR ERV1 408 600 -263 567 159 34 0 chr10 41699739 41699866 -98616899 + AluSc SINE Alu 191 320 0 4210 117 55 44 chr10 41699866 41700471 -98616294 - MER4B-int LTR ERV1 -4085 2513 2085 1921 149 7 0 chr10 41700471 41700759 -98616006 - AluSq SINE Alu -19 294 5 4210 117 55 44 chr10 41700759 41701394 -98615371 - MER4B-int LTR ERV1 -4513 2085 1458 2432 106 8 0 chr10 41701422 41701780 -98614985 - L1PB1 LINE L1 -3 6148 5788 3839 114 90 14 chr10 41701780 41702435 -98614330 + MER61-int LTR ERV1 4285 4989 -228 690 260 27 27 chr10 41702794 41703167 -98613598 - L1MEc LINE L1 -2715 3667 3295 2190 142 3 0 chr10 41703190 41703501 -98613264 - AluSx SINE Alu 0 312 1 897 272 33 22 chr10 41703510 41703878 -98612887 - L1MEc LINE L1 -3379 3003 2632 367 281 150 7 chr10 41703885 41704038 -98612727 - L1MEc LINE L1 -5026 1358 1184 856 255 101 34 chr10 41704044 41704459 -98612306 - L1MEc LINE L1 -5273 1290 848 527 95 0 0 chr10 41704459 41704533 -98612232 - FAM SINE Alu -8 177 104 872 283 63 24 chr10 41704587 41705001 -98611764 - L1MEc LINE L1 -5734 829 400 297 318 52 32 chr10 41705011 41705165 -98611600 - L2 LINE L2 -1034 2280 2124 223 326 45 45 chr10 41705585 41705717 -98611048 + MIR SINE MIR 26 157 -105 24 53 0 0 chr10 41705815 41705853 -98610912 + AT_rich Low_complexity Low_complexity 1 38 0 733 172 0 0 chr10 41705964 41706080 -98610685 - FLAM_C SINE Alu -27 116 1 24 67 0 0 chr10 41706741 41706786 -98609979 + AT_rich Low_complexity Low_complexity 1 45 0 262 282 194 8 chr10 41707180 41707428 -98609337 + L1ME4a LINE L1 5765 6058 -63 28 29 0 0 chr10 41707531 41707566 -98609199 + AT_rich Low_complexity Low_complexity 1 35 0 419 196 399 0 chr10 41707727 41707860 -98608905 + MER5A DNA MER1_type 4 189 0 649 291 72 25 chr10 41708086 41708323 -98608442 - MIR SINE MIR 0 262 15 7849 231 49 41 chr10 41708358 41710142 -98606623 + L1MA7 LINE L1 1 1770 -4580 2410 93 0 3 chr10 41710142 41710443 -98606322 + AluSq SINE Alu 1 300 -13 7849 231 49 41 chr10 41710443 41713376 -98603389 + L1MA7 LINE L1 1770 4429 -1921 865 218 75 93 chr10 41713376 41713837 -98602928 - MER66A LTR ERV1 -3 475 97 1347 136 68 19 chr10 41713893 41714203 -98602562 + L1MA7 LINE L1 4426 4750 -1600 448 207 78 0 chr10 41714196 41714312 -98602453 + L1 LINE L1 5223 5347 -799 * 4223 197 48 11 chr10 41714301 41715985 -98600780 + L1MA7 LINE L1 4739 6483 -12 2659 102 6 6 chr10 41716245 41716609 -98600156 - THE1B LTR MaLR 0 364 1 248 304 49 10 chr10 41716644 41716725 -98600040 - L2 LINE L2 -4 3309 3222 2135 120 16 13 chr10 41716725 41717034 -98599731 + AluSp SINE Alu 1 310 -3 248 304 49 10 chr10 41717034 41717054 -98599711 - L2 LINE L2 -91 3222 3204 237 65 0 0 chr10 41717446 41717477 -98599288 + (TG)n Simple_repeat Simple_repeat 2 32 0 1327 167 0 0 chr10 41717624 41717840 -98598925 - MLT1A1 LTR MaLR 0 365 150 952 219 0 0 chr10 41717840 41718009 -98598756 - FAM SINE Alu -13 172 4 2306 125 49 33 chr10 41718030 41718342 -98598423 + MER4B LTR ERV1 115 421 -358 2362 64 0 0 chr10 41718342 41718647 -98598118 - AluY SINE Alu 0 305 1 2306 125 49 33 chr10 41718647 41718823 -98597942 + MER4B LTR ERV1 421 779 0 2719 84 18 11 chr10 41720401 41720781 -98595984 + L1PA11 LINE L1 5792 6174 0 253 326 23 23 chr10 41722062 41722148 -98594617 + MIR SINE MIR 17 102 -160 2455 106 11 0 chr10 41722264 41722613 -98594152 + THE1A LTR MaLR 1 353 -2 2900 164 57 4 chr10 41722964 41723495 -98593270 - MER89 LTR ERV1 0 559 1 433 264 68 36 chr10 41726183 41726433 -98590332 - L1MC4 LINE L1 -1029 7013 6756 209 182 0 0 chr10 41726549 41726582 -98590183 + polypyrimidine Low_complexity Low_complexity 6 38 0 621 314 33 25 chr10 41726604 41726846 -98589919 + MIR SINE MIR 19 262 0 209 32 0 32 chr10 41727515 41727546 -98589219 + (TTCCC)n Simple_repeat Simple_repeat 5 34 0 816 154 19 6 chr10 41727736 41727898 -98588867 - MER89 LTR ERV1 -1 558 395 229 375 39 10 chr10 41728068 41728172 -98588593 + L2 LINE L2 3125 3231 -41 2179 122 0 0 chr10 41729762 41730056 -98586709 - AluSq SINE Alu -19 294 1 211 356 100 28 chr10 41730323 41730503 -98586262 + MIR SINE MIR 27 219 -43 588 284 107 50 chr10 41730921 41731379 -98585386 - L1MC4 LINE L1 -2000 5808 5325 221 325 223 6 chr10 41732030 41732196 -98584569 - MIR SINE MIR -1 261 60 387 210 98 128 chr10 41732204 41732759 -98584006 - MER34C LTR ERV1 -5 537 3 2580 138 34 15 chr10 41733266 41733526 -98583239 + L1MA4 LINE L1 5527 5801 -499 234 0 0 0 chr10 41733526 41733552 -98583213 + (TA)n Simple_repeat Simple_repeat 2 27 0 2580 138 34 15 chr10 41733552 41733756 -98583009 + L1MA4 LINE L1 5801 6000 -300 295 188 2 0 chr10 41733776 41733851 -98582914 + L1MB3 LINE L1 6079 6154 -17 7586 16 0 1 chr10 41734219 41735711 -98581054 - L1HS LINE L1 0 6155 4666 * 9903 24 0 0 chr10 41735709 41736919 -98579846 + L1HS LINE L1 3463 4672 -1474 5793 68 4 0 chr10 41737501 41738240 -98578525 + L1PA7 LINE L1 5402 6143 -11 217 390 48 0 chr10 41738909 41739014 -98577751 + L2 LINE L2 3138 3247 -25 308 345 35 7 chr10 41739186 41739328 -98577437 + MIR3 SINE MIR 60 205 -3 230 346 58 0 chr10 41739462 41739566 -98577199 - L2 LINE L2 0 3272 3163 189 372 47 40 chr10 41740004 41740152 -98576613 + MER5A DNA MER1_type 40 188 -1 398 329 32 0 chr10 41740194 41740349 -98576416 + MIR SINE MIR 54 213 -49 182 263 35 18 chr10 41740355 41740412 -98576353 + MER5B DNA MER1_type 11 68 -110 2129 128 3 6 chr10 41740826 41741139 -98575626 + AluSx SINE Alu 1 312 0 256 272 49 0 chr10 41741550 41741819 -98574946 + (TA)n Simple_repeat Simple_repeat 1 282 0 181 0 33 33 chr10 41741965 41741995 -98574770 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1231 202 89 16 chr10 41742000 41742257 -98574508 - AluJo SINE Alu -33 279 4 1858 168 0 20 chr10 41742768 41742904 -98573861 + AluJb SINE Alu 6 143 -169 2256 104 17 0 chr10 41742904 41743203 -98573562 + AluY SINE Alu 2 305 -6 1858 168 0 20 chr10 41743203 41743364 -98573401 + AluJb SINE Alu 143 297 -15 258 247 81 65 chr10 41743805 41743904 -98572861 - MARNA DNA Mariner -253 333 228 1475 212 48 0 chr10 41743904 41744197 -98572568 + AluJo SINE Alu 1 307 -5 258 247 81 65 chr10 41744197 41744283 -98572482 - MARNA DNA Mariner -358 228 145 578 92 0 0 chr10 41744482 41744558 -98572207 + AluSc SINE Alu 197 272 -37 403 176 10 10 chr10 41744566 41744668 -98572097 + CT-rich Low_complexity Low_complexity 2 103 0 3059 177 21 59 chr10 41744910 41745627 -98571138 - LTR8 LTR ERV1 -1 690 1 425 239 192 0 chr10 41746964 41747094 -98569671 - L2 LINE L2 -1 3271 3117 260 172 0 16 chr10 41747105 41747156 -98569609 + (CATA)n Simple_repeat Simple_repeat 2 53 -11 1615 118 230 28 chr10 41747156 41747512 -98569253 - MSTA LTR MaLR 0 428 1 260 172 0 16 chr10 41747512 41747524 -98569241 + (CATA)n Simple_repeat Simple_repeat 53 64 0 311 316 164 34 chr10 41747528 41747797 -98568968 - L2 LINE L2 -150 3163 2860 2187 169 102 36 chr10 41748144 41748438 -98568327 - LTR49 LTR ERV1 0 595 322 2343 100 7 3 chr10 41748438 41748748 -98568017 + AluSq SINE Alu 1 311 -2 2187 169 102 36 chr10 41748748 41749011 -98567754 - LTR49 LTR ERV1 -273 322 1 798 171 40 29 chr10 41749148 41749323 -98567442 + MER5B DNA MER1_type 2 178 0 1975 169 64 114 chr10 41749919 41750618 -98566147 - MER4A LTR ERV1 0 664 1 720 136 16 16 chr10 41751275 41751400 -98565365 + FLAM_C SINE Alu 11 135 -8 26 62 0 15 chr10 41752645 41752668 -98564097 + AT_rich Low_complexity Low_complexity 1 23 -41 3100 90 26 21 chr10 41752668 41752735 -98564030 + L1PA13 LINE L1 5685 5750 -413 2200 125 0 0 chr10 41752735 41753032 -98563733 + AluSx SINE Alu 1 297 -15 3100 90 26 21 chr10 41753032 41753433 -98563332 + L1PA13 LINE L1 5750 6155 -8 26 62 0 15 chr10 41753433 41753474 -98563291 + AT_rich Low_complexity Low_complexity 23 64 0 789 285 65 8 chr10 41753854 41754100 -98562665 - MIR SINE MIR 0 262 3 528 232 116 0 chr10 41754284 41754396 -98562369 + FLAM_A SINE Alu 4 128 -5 319 258 113 21 chr10 41754552 41754649 -98562116 + L2 LINE L2 3157 3262 -10 361 303 9 0 chr10 41756910 41757019 -98559746 - MIR SINE MIR -1 261 152 360 295 75 62 chr10 41757048 41757275 -98559490 + L1M3c LINE L1 173 402 -5911 2419 210 93 7 chr10 41757688 41758469 -98558296 + L1M3c LINE L1 777 1787 -4516 225 325 100 0 chr10 41758469 41758547 -98558218 - MIR SINE MIR -160 102 17 621 143 9 54 chr10 41758547 41758659 -98558106 + MER5A DNA MER1_type 1 107 -82 646 247 57 71 chr10 41758780 41759116 -98557649 + MER46C DNA MER2_type 6 336 -2 244 296 105 26 chr10 41759128 41759280 -98557485 + MIR3 SINE MIR 21 184 -24 505 81 40 0 chr10 41759382 41759456 -98557309 + MADE1 DNA Mariner 3 79 -1 2164 108 48 0 chr10 41760367 41760662 -98556103 + AluSx SINE Alu 1 309 -3 1138 82 98 27 chr10 41760672 41760696 -98556069 - MER107 DNA MER1_type 0 197 176 234 0 0 0 chr10 41760696 41760722 -98556043 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1138 82 98 27 chr10 41760722 41760881 -98555884 - MER107 DNA MER1_type -21 176 1 24 32 0 0 chr10 41761513 41761544 -98555221 + AT_rich Low_complexity Low_complexity 1 31 0 266 333 194 7 chr10 41761577 41761721 -98555044 - MIR3 SINE MIR -27 181 11 293 301 38 53 chr10 41762436 41762569 -98554196 + MIR SINE MIR 22 152 -110 375 23 0 0 chr10 41762648 41762692 -98554073 + (CAT)n Simple_repeat Simple_repeat 2 45 0 309 26 0 0 chr10 41763223 41763261 -98553504 + (TG)n Simple_repeat Simple_repeat 2 39 0 1948 91 7 18 chr10 41764196 41764471 -98552294 + AluSc SINE Alu 34 305 -4 1713 172 0 7 chr10 41764901 41765191 -98551574 - AluJb SINE Alu -14 298 11 22 0 0 0 chr10 41766405 41766427 -98550338 + AT_rich Low_complexity Low_complexity 1 22 0 258 119 48 0 chr10 41766954 41766996 -98549769 + tRNA-Leu-CTG tRNA tRNA 1 44 -42 872 174 25 156 chr10 41767111 41767294 -98549471 - MER34B LTR ERV1 0 585 438 1730 197 0 7 chr10 41767294 41767584 -98549181 - AluJo SINE Alu -24 288 1 872 174 25 156 chr10 41767584 41767729 -98549036 - MER34B LTR ERV1 -147 438 276 1124 146 10 94 chr10 41767730 41767939 -98548826 - MER7A DNA MER2_type -2692 336 116 2036 126 0 32 chr10 41767939 41768278 -98548487 + AluSq SINE Alu 1 313 0 1124 146 10 94 chr10 41768278 41768366 -98548399 - MER7A DNA MER2_type -2912 116 22 1096 155 55 59 chr10 41768385 41768656 -98548109 - MER34B LTR ERV1 -291 274 5 852 293 67 78 chr10 41769117 41769598 -98547167 + L2 LINE L2 2511 2974 -339 1945 122 0 11 chr10 41769598 41769861 -98546904 - AluSq SINE Alu -53 260 1 852 293 67 78 chr10 41769861 41770114 -98546651 + L2 LINE L2 2974 3228 -85 444 62 0 0 chr10 41770525 41770589 -98546176 + (TG)n Simple_repeat Simple_repeat 2 65 0 21 36 0 0 chr10 41771383 41771411 -98545354 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr10 41773776 41773804 -98542961 + AT_rich Low_complexity Low_complexity 1 28 0 250 269 43 92 chr10 41773962 41774103 -98542662 + MIR3 SINE MIR 10 143 -65 240 162 0 0 chr10 41774289 41774326 -98542439 + Alu SINE Alu 1 37 -262 256 135 0 0 chr10 41774413 41774450 -98542315 + Alu SINE Alu 1 37 -264 2284 110 0 10 chr10 41774534 41774843 -98541922 + AluSg SINE Alu 1 306 -4 585 193 176 0 chr10 41777806 41777982 -98538783 - MER5C DNA MER1_type 0 324 118 3814 112 20 27 chr10 41777983 41778261 -98538504 + MER51C LTR ERV1 1 280 -360 4613 70 52 5 chr10 41778261 41778891 -98537874 - PABL_A LTR ERV1 0 660 1 3814 112 20 27 chr10 41778891 41779275 -98537490 + MER51C LTR ERV1 280 640 0 289 148 98 0 chr10 41779275 41779336 -98537429 - MER5C DNA MER1_type -204 120 54 2214 102 3 23 chr10 41779610 41779787 -98536978 - AluSx SINE Alu -13 299 129 252 86 0 0 chr10 41779787 41779822 -98536943 + (TA)n Simple_repeat Simple_repeat 2 36 0 2214 102 3 23 chr10 41779822 41779949 -98536816 - AluSx SINE Alu -183 129 1 23 33 0 0 chr10 41780466 41780496 -98536269 + AT_rich Low_complexity Low_complexity 1 30 0 193 182 0 0 chr10 41782213 41782246 -98534519 - L2 LINE L2 -7 3306 3274 180 191 48 0 chr10 41782234 41782276 -98534489 - MER5A DNA MER1_type -21 168 125 * 570 239 75 0 chr10 41782935 41783136 -98533629 + L1MD3 LINE L1 7771 7986 -9 228 67 0 0 chr10 41783531 41783561 -98533204 + (T)n Simple_repeat Simple_repeat 1 30 0 185 222 0 22 chr10 41785299 41785344 -98531421 - L2 LINE L2 -5 3308 3265 750 312 113 60 chr10 41785770 41787184 -98529581 - L2 LINE L2 -580 2734 1246 843 131 15 0 chr10 41787485 41787615 -98529150 + FLAM_C SINE Alu 2 133 0 2165 127 0 0 chr10 41787879 41788171 -98528594 - AluSg SINE Alu -18 292 1 846 183 6 74 chr10 41788172 41788347 -98528418 - FRAM SINE Alu -13 163 1 2509 54 0 3 chr10 41788357 41788654 -98528111 - AluY SINE Alu -15 296 1 367 273 58 8 chr10 41789276 41789397 -98527368 - MIR SINE MIR -12 250 124 2221 102 3 0 chr10 41789417 41789702 -98527063 + AluSq SINE Alu 1 286 -27 225 304 70 43 chr10 41789722 41789837 -98526928 - MIR SINE MIR -138 124 7 880 45 0 0 chr10 41790524 41790635 -98526130 + L1PA5 LINE L1 6040 6150 -4 758 234 73 108 chr10 41791400 41791772 -98524993 + MLT1A1 LTR MaLR 6 364 -1 263 138 21 43 chr10 41791776 41791870 -98524895 + (TCTA)n Simple_repeat Simple_repeat 2 93 0 918 78 37 26 chr10 41791908 41792191 -98524574 + (TCTA)n Simple_repeat Simple_repeat 1 466 0 1048 130 35 25 chr10 41792565 41792765 -98524000 + L1MA8 LINE L1 6060 6261 -30 22 56 0 0 chr10 41792781 41792817 -98523948 + AT_rich Low_complexity Low_complexity 1 36 0 1017 202 204 34 chr10 41793512 41793957 -98522808 + HsTC2a DNA Tc2 8 528 -216 314 368 32 8 chr10 41793963 41794088 -98522677 + L2 LINE L2 3140 3267 -5 859 165 0 82 chr10 41794191 41794361 -98522404 + FRAM SINE Alu 1 156 -20 28 0 0 0 chr10 41794590 41794618 -98522147 + AT_rich Low_complexity Low_complexity 1 28 0 2294 121 0 0 chr10 41795093 41795399 -98521366 + AluSg SINE Alu 1 306 -4 28 29 0 0 chr10 41795660 41795695 -98521070 + AT_rich Low_complexity Low_complexity 1 35 0 377 255 77 21 chr10 41795695 41795930 -98520835 + L1ME3A LINE L1 2738 2985 -3161 2519 279 69 12 chr10 41795950 41797493 -98519272 + L1ME3A LINE L1 4523 6155 -15 22 0 0 0 chr10 41799969 41799991 -98516774 + AT_rich Low_complexity Low_complexity 1 22 0 368 256 92 0 chr10 41800823 41800959 -98515806 + MIR SINE MIR 42 198 -64 1917 157 0 16 chr10 41801123 41801429 -98515336 + AluSx SINE Alu 1 301 -11 1965 143 13 0 chr10 41801847 41802180 -98514585 + AluSx SINE Alu 1 312 0 246 208 0 0 chr10 41802186 41802239 -98514526 + GA-rich Low_complexity Low_complexity 2 54 0 229 256 12 23 chr10 41802617 41802632 -98514133 + GA-rich Low_complexity Low_complexity 4 18 -70 1669 161 21 18 chr10 41802632 41802918 -98513847 + AluJo SINE Alu 15 301 -11 229 256 12 23 chr10 41802918 41802988 -98513777 + GA-rich Low_complexity Low_complexity 18 88 0 2105 122 0 13 chr10 41803852 41804155 -98512610 - AluSx SINE Alu -13 299 1 554 209 174 94 chr10 41804461 41804972 -98511793 - MER34C LTR ERV1 0 585 34 400 306 34 14 chr10 41805331 41805478 -98511287 - MIR3 SINE MIR -15 193 44 348 24 0 0 chr10 41806198 41806239 -98510526 + (CA)n Simple_repeat Simple_repeat 2 42 0 504 195 205 25 chr10 41806897 41807097 -98509668 + MER106A DNA MER1_type 1 236 0 364 318 104 50 chr10 41807132 41807793 -98508972 + L1M4 LINE L1 2332 3028 -3118 3715 58 6 0 chr10 41807922 41808390 -98508375 - L1PA8 LINE L1 -2 6170 5700 1605 233 36 42 chr10 41808590 41809096 -98507669 + MLT1D LTR MaLR 3 505 0 699 197 16 0 chr10 41809273 41809400 -98507365 + FLAM_C SINE Alu 1 129 -4 2428 76 0 0 chr10 41809474 41809778 -98506987 + AluY SINE Alu 1 304 -7 205 109 43 22 chr10 41810355 41810401 -98506364 + (TTTA)n Simple_repeat Simple_repeat 4 50 0 298 355 60 17 chr10 41810794 41811028 -98505737 - L2 LINE L2 -458 2856 2613 1212 212 22 18 chr10 41811064 41811342 -98505423 + AluJo SINE Alu 1 279 -33 318 219 20 0 chr10 41811344 41811490 -98505275 + (TA)n Simple_repeat Simple_repeat 1 149 0 336 244 70 45 chr10 41812464 41812706 -98504059 + L1ME4a LINE L1 5636 5883 -238 2094 134 0 0 chr10 41812724 41813031 -98503734 + AluSx SINE Alu 1 307 0 218 218 18 0 chr10 41813263 41813318 -98503447 + (CAAA)n Simple_repeat Simple_repeat 2 57 0 184 154 0 51 chr10 41813817 41813856 -98502909 + L3b LINE CR1 1196 1232 -351 674 264 17 6 chr10 41814151 41814325 -98502440 - MER5B DNA MER1_type 0 178 3 2056 127 3 3 chr10 41814370 41814678 -98502087 - AluSc SINE Alu 0 309 2 280 250 0 36 chr10 41814908 41814992 -98501773 - MIR SINE MIR -54 208 128 25 51 0 0 chr10 41814992 41815031 -98501734 + AT_rich Low_complexity Low_complexity 1 39 0 772 232 19 58 chr10 41816986 41817220 -98499545 - MIR SINE MIR -1 261 38 319 197 16 0 chr10 41817220 41817281 -98499484 - MIR SINE MIR -131 131 70 23 33 0 0 chr10 41818499 41818529 -98498236 + AT_rich Low_complexity Low_complexity 1 30 0 2126 115 19 19 chr10 41819068 41819380 -98497385 - AluSx SINE Alu 0 312 1 1749 130 16 0 chr10 41820196 41820443 -98496322 + AluSq SINE Alu 40 290 -23 1938 145 0 3 chr10 41820764 41821078 -98495687 + AluSx SINE Alu 1 313 0 866 283 32 78 chr10 41821227 41821765 -98495000 + MER34 LTR ERV1 1 513 -29 321 283 125 0 chr10 41822187 41822307 -98494458 + MLT1G1 LTR MaLR 427 561 -34 259 300 50 0 chr10 41822963 41823043 -98493722 + MER91C DNA MER1_type 22 105 -35 194 300 20 0 chr10 41823888 41823938 -98492827 + L2 LINE L2 3244 3294 -19 2124 96 0 36 chr10 41824295 41824596 -98492169 - AluSg SINE Alu -20 290 1 226 365 40 32 chr10 41825778 41825904 -98490861 + L2 LINE L2 2587 2713 -601 242 320 107 95 chr10 41826067 41826458 -98490307 + L2 LINE L2 2874 3269 -3 2315 84 0 3 chr10 41826520 41826835 -98489930 + AluY SINE Alu 1 314 0 1224 251 106 9 chr10 41827558 41828020 -98488745 + Charlie4a DNA MER1_type 1 507 -1 1412 192 69 3 chr10 41828307 41828625 -98488140 + MER44D DNA MER2_type 1 609 0 371 321 155 0 chr10 41829587 41829755 -98487010 + MIR SINE MIR 55 248 -14 4196 170 9 7 chr10 41830132 41830902 -98485863 - L1PA16 LINE L1 -13 6153 5382 288 256 39 0 chr10 41830979 41831057 -98485708 + MIR SINE MIR 55 135 -127 1019 201 108 0 chr10 41831149 41831427 -98485338 - L1 LINE L1 -743 5403 5096 1414 149 50 71 chr10 41831706 41831987 -98484778 - AluJo SINE Alu -17 295 21 2323 105 0 3 chr10 41832059 41832365 -98484400 + AluSc SINE Alu 1 305 -4 993 163 19 12 chr10 41832397 41832557 -98484208 - FRAM SINE Alu -18 158 1 431 247 101 0 chr10 41832581 41832759 -98484006 - L1MC4 LINE L1 -970 7072 6877 247 327 107 39 chr10 41832980 41833185 -98483580 - MIR SINE MIR -27 235 17 29 0 0 0 chr10 41833764 41833793 -98482972 + AT_rich Low_complexity Low_complexity 1 29 0 1767 74 39 0 chr10 41833793 41834051 -98482714 - L1MA1 LINE L1 0 6302 6035 887 277 28 20 chr10 41834067 41834320 -98482445 - MIR SINE MIR -6 256 2 5810 164 31 28 chr10 41835070 41835663 -98481102 - L1MC3 LINE L1 -27 7758 7169 2382 100 7 0 chr10 41835663 41835973 -98480792 + AluSp SINE Alu 1 312 -1 5810 164 31 28 chr10 41835973 41836617 -98480148 - L1MC3 LINE L1 -616 7169 6516 585 286 91 12 chr10 41837128 41837369 -98479396 - MIR SINE MIR -1 261 2 187 344 16 0 chr10 41837691 41837752 -98479013 - L2 LINE L2 -5 3267 3206 1922 132 19 0 chr10 41837935 41838201 -98478564 - AluSx SINE Alu -19 293 23 719 258 121 5 chr10 41838242 41838432 -98478333 + MIR SINE MIR 17 228 -34 342 358 11 6 chr10 41838439 41838618 -98478147 + (TG)n Simple_repeat Simple_repeat 1 180 0 207 239 57 0 chr10 41839587 41839675 -98477090 + A-rich Low_complexity Low_complexity 2 94 0 204 349 61 0 chr10 41840126 41840192 -98476573 + L2 LINE L2 3197 3266 -47 314 317 0 17 chr10 41841776 41841896 -98474869 - MER117 DNA MER1_type -52 145 28 375 326 190 34 chr10 41842530 41842883 -98473882 + L2 LINE L2 2860 3267 -5 251 182 45 82 chr10 41843402 41843512 -98473253 - MER103 DNA DNA -11 155 50 285 212 0 30 chr10 41843789 41843855 -98472910 + MIR3 SINE MIR 121 184 -24 27617 46 7 0 chr10 41843916 41848315 -98468450 - L1PA5 LINE L1 -8 6146 1720 443 278 66 36 chr10 41848478 41848863 -98467902 - MLT1J LTR MaLR -24 487 50 1844 143 7 11 chr10 41849334 41849621 -98467144 + AluJb SINE Alu 1 286 -26 21 0 0 0 chr10 41849622 41849643 -98467122 + AT_rich Low_complexity Low_complexity 1 21 0 2202 113 0 0 chr10 41849828 41850120 -98466645 + AluSg SINE Alu 1 292 -18 266 311 11 56 chr10 41851141 41851321 -98465444 + MIR SINE MIR 65 236 -26 287 272 98 11 chr10 41851552 41851644 -98465121 + MIR SINE MIR 76 175 -87 271 197 148 0 chr10 41852024 41852085 -98464680 - L2 LINE L2 0 3313 3244 320 252 62 87 chr10 41852086 41852326 -98464439 + L1MEd LINE L1 1076 1353 -4862 809 184 0 0 chr10 41852375 41852500 -98464265 + FLAM_C SINE Alu 3 127 -16 3214 238 52 22 chr10 41852506 41853558 -98463207 - L1M4 LINE L1 -2365 3781 2698 504 275 122 46 chr10 41854005 41854267 -98462498 + L2 LINE L2 3032 3313 0 2851 180 78 3 chr10 41855596 41856164 -98460601 + LTR31 LTR ERV1 1 610 -9 1100 202 165 74 chr10 41856981 41857465 -98459300 + MLT1E2 LTR MaLR 115 626 0 485 250 109 35 chr10 41857687 41857934 -98458831 + L1MC/D LINE L1 5416 5688 -770 998 282 30 15 chr10 41857934 41858267 -98458498 - MER46C DNA MER2_type 0 338 1 485 250 109 35 chr10 41858267 41858296 -98458469 + L1MC/D LINE L1 5688 5713 -745 1019 172 129 168 chr10 41858725 41859082 -98457683 - MSTD LTR MaLR 0 396 56 1631 127 120 8 chr10 41859082 41859341 -98457424 - AluSg1 SINE Alu -21 288 1 1019 172 129 168 chr10 41859341 41859395 -98457370 - MSTD LTR MaLR -340 56 1 1959 155 32 91 chr10 41859500 41859743 -98457022 - LTR56 LTR ERV1 0 445 240 549 115 0 0 chr10 41859743 41859821 -98456944 - L1PA7 LINE L1 0 6154 6077 1959 155 32 91 chr10 41859821 41860041 -98456724 - LTR56 LTR ERV1 -205 240 9 189 0 0 0 chr10 41860372 41860393 -98456372 + (TATG)n Simple_repeat Simple_repeat 2 22 0 2308 91 3 0 chr10 41860804 41861100 -98455665 - AluSp SINE Alu -16 297 1 3143 66 5 13 chr10 41861670 41862058 -98454707 + L1PA6 LINE L1 5754 6140 -14 180 0 0 0 chr10 41862058 41862078 -98454687 + (CTA)n Simple_repeat Simple_repeat 1 20 0 207 0 0 0 chr10 41862191 41862214 -98454551 + (A)n Simple_repeat Simple_repeat 1 23 0 1063 171 47 0 chr10 41865397 41865590 -98451175 + MER3 DNA MER1_type 4 205 -4 834 159 16 0 chr10 41866096 41866222 -98450543 - FRAM SINE Alu -20 156 29 784 258 152 16 chr10 41868925 41869301 -98447464 + L1ME3 LINE L1 5646 6072 -90 1158 197 106 3 chr10 41869808 41870092 -98446673 - MER33 DNA MER1_type 0 324 12 459 190 60 20 chr10 41870128 41870228 -98446537 + MER5A DNA MER1_type 4 107 -82 890 216 79 0 chr10 41870419 41870609 -98446156 + MER3 DNA MER1_type 4 208 -1 595 126 0 0 chr10 41872060 41872147 -98444618 - AluJo/FRAM SINE Alu -16 296 210 1074 139 0 6 chr10 41872147 41872305 -98444460 + AluSc SINE Alu 136 292 -17 1255 153 70 121 chr10 41872345 41872659 -98444106 + AluJb SINE Alu 2 299 -3 277 231 148 74 chr10 41872743 41872851 -98443914 + AluJb SINE Alu 110 225 -77 1183 124 5 62 chr10 41872856 41873065 -98443700 - AluJb SINE Alu -114 198 2 565 239 0 0 chr10 41873125 41873234 -98443531 - AluSg/x SINE Alu -23 287 179 2068 82 14 20 chr10 41873286 41873578 -98443187 - AluSg SINE Alu -20 290 1 495 186 356 21 chr10 41874646 41874834 -98441931 + AluJo SINE Alu 45 295 -17 943 101 22 29 chr10 41874894 41875033 -98441732 + AluJo SINE Alu 23 160 -152 595 188 7 83 chr10 41875040 41875184 -98441581 - FLAM_C SINE Alu 0 133 1 1971 114 11 0 chr10 41875220 41875493 -98441272 + AluSx SINE Alu 2 277 -35 1014 227 15 0 chr10 41875495 41875698 -98441067 + AluJo SINE Alu 76 281 -31 180 0 0 0 chr10 41875698 41875718 -98441047 + (CTAG)n Simple_repeat Simple_repeat 1 20 0 2057 115 0 33 chr10 41876441 41876769 -98439996 - AluSq SINE Alu 0 313 1 2254 102 10 0 chr10 41876791 41877086 -98439679 + AluSp SINE Alu 1 298 -15 2205 113 6 3 chr10 41877223 41877534 -98439231 - AluSx SINE Alu 0 312 1 2128 139 0 13 chr10 41877748 41877927 -98438838 - AluSx SINE Alu 0 312 137 2252 119 3 0 chr10 41877927 41878230 -98438535 - AluSp SINE Alu -9 304 1 2128 139 0 13 chr10 41878230 41878366 -98438399 - AluSx SINE Alu -175 137 1 244 266 16 0 chr10 41879849 41879913 -98436852 + MIR SINE MIR 21 85 -177 189 239 30 15 chr10 41880262 41880329 -98436436 + MIR SINE MIR 85 152 -56 304 98 0 0 chr10 41880599 41880650 -98436115 + AluSp/q SINE Alu 251 301 -2 1990 110 14 3 chr10 41881507 41881809 -98434956 + AluSq SINE Alu 1 305 0 1721 171 14 0 chr10 41882598 41882890 -98433875 + AluSx SINE Alu 2 297 -15 2137 131 0 3 chr10 41883067 41883373 -98433392 - AluSx SINE Alu -7 305 1 1475 224 175 2 chr10 41883404 41883833 -98432932 - MLT1D LTR MaLR -2 503 1 1294 156 40 46 chr10 41883961 41884263 -98432502 - AluY SINE Alu -11 300 1 2190 112 0 0 chr10 41884957 41885252 -98431513 - AluSg1 SINE Alu -14 295 1 2211 107 10 0 chr10 41885313 41885612 -98431153 + AluSp SINE Alu 3 304 -9 2089 114 4 0 chr10 41886409 41886690 -98430075 - AluSg SINE Alu -28 282 1 1726 162 10 7 chr10 41887431 41887721 -98429044 - AluSx SINE Alu -19 293 3 1768 124 0 12 chr10 41888032 41888289 -98428476 - AluSq SINE Alu -14 299 46 444 192 27 0 chr10 41888289 41888362 -98428403 - AluS SINE Alu -237 76 2 180 0 0 0 chr10 41888567 41888587 -98428178 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1771 155 11 4 chr10 41888588 41888866 -98427899 - AluSq SINE Alu -33 280 1 1680 173 88 16 chr10 41889987 41890305 -98426460 + MSTD LTR MaLR 1 341 -55 678 163 17 22 chr10 41890340 41890518 -98426247 + CT-rich Low_complexity Low_complexity 4 180 0 367 182 0 0 chr10 41890518 41890584 -98426181 + MSTD LTR MaLR 330 395 -1 867 205 42 121 chr10 41891067 41891399 -98425366 - L1MC4 LINE L1 -938 7069 6718 1800 98 0 0 chr10 41893115 41893339 -98423426 - AluSq SINE Alu -87 226 3 369 0 0 0 chr10 41893658 41893699 -98423066 + (TG)n Simple_repeat Simple_repeat 2 42 0 1576 208 0 0 chr10 41893700 41893984 -98422781 - AluJb SINE Alu -28 284 1 1053 138 0 0 chr10 41894396 41894541 -98422224 - AluJb SINE Alu -38 274 130 541 176 9 65 chr10 41894552 41894660 -98422105 - MER8 DNA MER2_type -134 105 4 633 175 29 0 chr10 41894880 41894983 -98421782 + U6 snRNA snRNA 2 107 0 312 254 4 33 chr10 41895025 41895143 -98421622 - L1MC4 LINE L1 -469 5652 5577 516 111 12 25 chr10 41895148 41895229 -98421536 + AluJ/FLAM SINE Alu 4 83 -229 2149 116 7 0 chr10 41895424 41895718 -98421047 - AluSg SINE Alu -14 296 1 1481 191 30 30 chr10 41895779 41896082 -98420683 - AluJo SINE Alu -7 305 3 32 26 0 0 chr10 41896152 41896191 -98420574 + AT_rich Low_complexity Low_complexity 1 39 0 363 266 18 18 chr10 41896344 41896453 -98420312 - L1MC4a LINE L1 -1977 5831 5723 1370 223 7 23 chr10 41896491 41896792 -98419973 + AluJo SINE Alu 1 296 -16 638 235 0 0 chr10 41896794 41896909 -98419856 + AluJb SINE Alu 185 299 -13 207 203 47 31 chr10 41897287 41897351 -98419414 + (GGGTG)n Simple_repeat Simple_repeat 1 65 0 245 239 110 55 chr10 41897581 41897690 -98419075 - MIR SINE MIR -75 187 73 7423 111 23 16 chr10 41897805 41898869 -98417896 - MER11C LTR ERVK 0 1071 1 2708 232 80 40 chr10 41898889 41899170 -98417595 - MER21B LTR ERV1 -61 802 534 1815 161 0 16 chr10 41899170 41899475 -98417290 - AluJo SINE Alu -12 300 1 2708 232 80 40 chr10 41899475 41899784 -98416981 - MER21B LTR ERV1 -329 534 173 2052 143 0 3 chr10 41899784 41900078 -98416687 + AluSq SINE Alu 1 293 -20 2708 232 80 40 chr10 41900078 41900240 -98416525 - MER21B LTR ERV1 -690 173 19 346 291 0 0 chr10 41900262 41900341 -98416424 - MER21B LTR ERV1 -773 90 12 1507 206 0 7 chr10 41900347 41900619 -98416146 - AluJo SINE Alu -38 274 5 1499 194 14 57 chr10 41900622 41900973 -98415792 + MLT1D LTR MaLR 162 497 -8 1568 199 10 14 chr10 41901000 41901127 -98415638 + AluJb SINE Alu 10 136 -176 2106 102 35 0 chr10 41901127 41901411 -98415354 + AluSg1 SINE Alu 1 294 -15 1568 199 10 14 chr10 41901411 41901574 -98415191 + AluJb SINE Alu 136 299 -13 1216 271 80 32 chr10 41901574 41902185 -98414580 - L2 LINE L2 -216 3097 2456 749 196 0 0 chr10 41902282 41902415 -98414350 + FLAM_C SINE Alu 1 133 0 23 0 0 0 chr10 41902415 41902438 -98414327 + AT_rich Low_complexity Low_complexity 1 23 0 1303 240 10 7 chr10 41902438 41902734 -98414031 + AluJo SINE Alu 2 298 -4 342 245 11 11 chr10 41902879 41902973 -98413792 + LTR37A LTR ERV1 240 333 -93 2062 147 0 3 chr10 41903184 41903490 -98413275 - AluSq SINE Alu -8 305 1 1621 185 20 20 chr10 41903792 41904094 -98412671 - AluJo SINE Alu -10 302 1 2776 196 39 34 chr10 41904115 41904734 -98412031 - L1MB8 LINE L1 -5 6173 5552 671 189 0 0 chr10 41904734 41904845 -98411920 + FLAM_A SINE Alu 4 114 -19 481 173 8 102 chr10 41904879 41904967 -98411798 - L1ME LINE L1 -577 5589 5505 1694 181 10 7 chr10 41904967 41905260 -98411505 - AluJb SINE Alu -18 294 1 481 173 8 102 chr10 41905260 41905291 -98411474 - L1ME LINE L1 -661 5505 5473 597 201 0 122 chr10 41905349 41905409 -98411356 + AluJo SINE Alu 24 90 -222 312 83 0 0 chr10 41905409 41905457 -98411308 + (TTG)n Simple_repeat Simple_repeat 1 48 0 1802 153 22 4 chr10 41905457 41905731 -98411034 - AluSx SINE Alu -33 279 1 597 201 0 122 chr10 41905731 41905833 -98410932 + AluJo SINE Alu 88 167 -145 1396 166 126 15 chr10 41905847 41906118 -98410647 - AluJo SINE Alu -1 301 1 1373 238 0 14 chr10 41906371 41906665 -98410100 - AluJo SINE Alu -18 294 5 344 201 25 132 chr10 41906666 41906825 -98409940 - MLT1D LTR MaLR -292 213 72 189 261 72 14 chr10 41906894 41906963 -98409802 - L2 LINE L2 -32 3281 3209 1726 179 0 13 chr10 41907596 41907903 -98408862 - AluJb SINE Alu -9 303 1 2310 98 3 0 chr10 41907989 41908284 -98408481 - AluSp SINE Alu -17 296 1 24 53 0 0 chr10 41908284 41908322 -98408443 + AT_rich Low_complexity Low_complexity 1 38 0 1853 165 0 3 chr10 41908324 41908615 -98408150 - AluJb SINE Alu -18 294 5 2982 127 9 2 chr10 41908975 41909407 -98407358 + MER1A DNA MER1_type 56 490 -39 704 197 0 0 chr10 41909420 41909537 -98407228 - FLAM_C SINE Alu -18 125 9 569 126 53 0 chr10 41909578 41909856 -98406909 + AluJb SINE Alu 194 476 0 1154 0 16 55 chr10 41909674 41909950 -98406815 + (TAAAA)n Simple_repeat Simple_repeat 3 271 0 191 281 21 31 chr10 41910252 41910348 -98406417 - L2 LINE L2 -211 3061 2967 244 360 36 0 chr10 41910631 41910742 -98406023 - MIR SINE MIR -75 187 73 2595 235 51 43 chr10 41910905 41911150 -98405615 - MER21B LTR ERV1 -112 751 510 1604 208 13 0 chr10 41911150 41911448 -98405317 - AluJo SINE Alu -10 302 1 2595 235 51 43 chr10 41911448 41911518 -98405247 - MER21B LTR ERV1 -353 510 442 1589 186 3 46 chr10 41911518 41911824 -98404941 + AluJb SINE Alu 2 294 -18 2595 235 51 43 chr10 41911824 41912234 -98404531 - MER21B LTR ERV1 -421 442 19 306 286 0 0 chr10 41912260 41912330 -98404435 - MER21B LTR ERV1 -777 86 17 1119 177 3 118 chr10 41912331 41912619 -98404146 - AluJb SINE Alu -13 299 45 686 225 0 0 chr10 41912619 41912739 -98404026 - FLAM_A SINE Alu -13 120 1 648 235 0 7 chr10 41912744 41912880 -98403885 - FLAM_C SINE Alu -7 136 2 1502 175 25 76 chr10 41912880 41913234 -98403531 + MLT1D LTR MaLR 162 497 -8 1719 178 23 13 chr10 41913243 41913377 -98403388 + AluJo SINE Alu 1 132 -180 2152 116 0 10 chr10 41913377 41913689 -98403076 + AluSq SINE Alu 1 313 0 1719 178 23 13 chr10 41913689 41913863 -98402902 + AluJo SINE Alu 132 312 0 1060 228 92 73 chr10 41913864 41914502 -98402263 - L2 LINE L2 -213 3100 2458 539 241 0 0 chr10 41914608 41914724 -98402041 + FLAM_C SINE Alu 9 124 -19 1300 234 14 3 chr10 41914748 41915043 -98401722 + AluJo SINE Alu 1 298 -14 2141 115 3 7 chr10 41915201 41915496 -98401269 + AluSq SINE Alu 5 298 -15 243 211 228 22 chr10 41915539 41915719 -98401046 + Charlie1 DNA MER1_type 2539 2755 -6 1360 205 8 4 chr10 41915773 41916041 -98400724 - AluJo SINE Alu -4 308 40 1060 189 0 5 chr10 41916641 41916831 -98399934 - AluJb SINE Alu -7 305 117 390 226 39 49 chr10 41916831 41916933 -98399832 - MER8 DNA MER2_type -136 103 3 1582 187 0 13 chr10 41917041 41917341 -98399424 + AluJo SINE Alu 1 296 -16 489 206 14 78 chr10 41917579 41917720 -98399045 + AluJo SINE Alu 11 142 -170 304 232 12 24 chr10 41917720 41917802 -98398963 - L1ME LINE L1 -558 5563 5483 1549 179 42 14 chr10 41917933 41918218 -98398547 - AluJo SINE Alu -19 293 1 272 231 33 44 chr10 41918283 41918374 -98398391 + LTR33A LTR ERVL 432 521 -2 2590 131 64 19 chr10 41918638 41919058 -98397707 + MER1A DNA MER1_type 1 439 -90 2218 108 0 0 chr10 41923806 41924103 -98392662 + AluSg SINE Alu 1 297 -13 442 158 0 0 chr10 41927175 41927257 -98389508 - AluSq SINE Alu -2 311 230 877 152 21 7 chr10 41927259 41927404 -98389361 - AluSq SINE Alu -162 151 5 927 234 43 18 chr10 41927411 41927857 -98388908 - L1M2 LINE L1 -4226 2623 2069 2241 103 3 22 chr10 41927857 41928168 -98388597 - AluSg SINE Alu -5 305 1 927 234 43 18 chr10 41928168 41928274 -98388491 - L1M2 LINE L1 -4780 2069 1967 682 158 0 0 chr10 41928275 41928376 -98388389 - FLAM_C SINE Alu -40 103 3 719 119 0 28 chr10 41928378 41928487 -98388278 + AluJo/FLAM SINE Alu 27 132 -180 1872 107 3 66 chr10 41928489 41928778 -98387987 + AluSx SINE Alu 37 307 -5 221 291 30 70 chr10 41929172 41929264 -98387501 + L2 LINE L2 3118 3212 -101 2230 120 0 0 chr10 41929264 41929564 -98387201 + AluSq SINE Alu 1 300 -13 221 291 30 70 chr10 41929564 41929670 -98387095 + L2 LINE L2 3212 3308 -5 2022 126 0 0 chr10 41930110 41930380 -98386385 + AluSx SINE Alu 1 270 -42 321 246 109 36 chr10 41930504 41930614 -98386151 + L2 LINE L2 3195 3312 -1 22 35 0 0 chr10 41931001 41931030 -98385735 + AT_rich Low_complexity Low_complexity 1 29 0 1556 208 39 33 chr10 41931157 41931923 -98384842 - L1M4c LINE L1 -4071 2313 1451 907 137 41 25 chr10 41931924 41932121 -98384644 - L1MA5 LINE L1 0 6300 6101 1886 175 13 0 chr10 41933283 41933586 -98383179 - AluJb SINE Alu -5 307 1 348 387 45 28 chr10 41933749 41934300 -98382465 - L2 LINE L2 -2 3270 2710 482 257 0 9 chr10 41934311 41934424 -98382341 - L2 LINE L2 -5 3308 3197 191 146 24 0 chr10 41934704 41934745 -98382020 + (TA)n Simple_repeat Simple_repeat 1 42 0 573 125 0 0 chr10 41934891 41934987 -98381778 - L1MA5 LINE L1 -5 6295 6200 212 182 0 18 chr10 41935026 41935081 -98381684 + (CATATA)n Simple_repeat Simple_repeat 3 56 0 45 62 0 0 chr10 41936444 41936524 -98380241 + AT_rich Low_complexity Low_complexity 1 80 0 2545 60 0 0 chr10 41936596 41936894 -98379871 + AluY SINE Alu 1 298 -13 508 39 110 0 chr10 41937029 41937183 -98379582 + (TA)n Simple_repeat Simple_repeat 1 171 0 1932 116 86 50 chr10 41938207 41938569 -98378196 + THE1C LTR MaLR 1 375 0 29 47 0 0 chr10 41938655 41938698 -98378067 + AT_rich Low_complexity Low_complexity 1 43 0 1057 278 118 26 chr10 41938998 41940041 -98376724 - L1ME3A LINE L1 -94 6010 4906 1841 220 41 31 chr10 41940041 41940531 -98376234 - MLT1D LTR MaLR -10 495 1 290 286 116 15 chr10 41940728 41940927 -98375838 - L1ME3A LINE L1 -1430 4699 4481 * 582 218 16 31 chr10 41940917 41941110 -98375655 - L1ME3A LINE L1 -2163 3966 3777 1056 281 71 14 chr10 41941110 41941769 -98374996 - L2 LINE L2 -4 3309 2616 283 325 8 0 chr10 41941933 41942050 -98374715 + L1M4 LINE L1 3524 3641 -2505 369 288 109 51 chr10 41942056 41942539 -98374226 - MER65A LTR ERV1 0 445 2 224 250 183 0 chr10 41942670 41942774 -98373991 + L2 LINE L2 2321 2443 -871 673 302 92 47 chr10 41943448 41943915 -98372850 - L1ME3A LINE L1 -5285 834 347 843 316 52 52 chr10 41943995 41944419 -98372346 - MLT1E LTR MaLR -148 445 22 393 338 72 47 chr10 41945538 41946042 -98370723 - L2 LINE L2 0 3272 2762 2215 116 0 3 chr10 41946742 41947045 -98369720 - AluSq SINE Alu -11 302 1 6050 98 27 0 chr10 41947181 41948045 -98368720 - L1PA14 LINE L1 0 6161 5275 870 218 0 29 chr10 41948116 41948290 -98368475 + FAM SINE Alu 4 172 -3 206 128 26 0 chr10 41948312 41948351 -98368414 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 390 42 0 0 chr10 41948511 41948559 -98368206 + (CA)n Simple_repeat Simple_repeat 1 48 0 707 188 115 19 chr10 41949559 41949793 -98366972 - AluJo SINE Alu -12 300 1 292 328 168 13 chr10 41949802 41950040 -98366725 - L2 LINE L2 -112 3201 2927 246 326 22 0 chr10 41950252 41950344 -98366421 + MIR SINE MIR 82 175 -87 1125 223 127 13 chr10 41950348 41950648 -98366117 - MLT1C LTR MaLR 0 467 134 283 348 54 0 chr10 41951591 41951703 -98365062 + MER5B DNA MER1_type 1 118 -60 340 277 128 21 chr10 41952381 41952496 -98364269 - L1ME4a LINE L1 -4 6117 6016 210 37 0 0 chr10 41952496 41952523 -98364242 + (TA)n Simple_repeat Simple_repeat 1 27 0 340 277 128 21 chr10 41952523 41952595 -98364170 - L1ME4a LINE L1 -105 6016 5910 307 333 159 43 chr10 41953055 41953614 -98363151 - L3 LINE CR1 -10 1567 944 401 290 47 24 chr10 41953625 41953794 -98362971 + LTR33 LTR ERVL 1 173 -348 2121 152 57 31 chr10 41953916 41953936 -98362829 - MSTB1 LTR MaLR 0 432 414 240 35 0 0 chr10 41953936 41953965 -98362800 + (TG)n Simple_repeat Simple_repeat 2 30 0 2121 152 57 31 chr10 41953965 41954215 -98362550 - MSTB1 LTR MaLR -18 414 145 2322 85 0 3 chr10 41954215 41954509 -98362256 + AluSq SINE Alu 5 297 -16 2121 152 57 31 chr10 41954509 41954658 -98362107 - MSTB1 LTR MaLR -287 145 1 273 118 0 0 chr10 41954667 41954718 -98362047 + (GAATG)n Satellite Satellite 4 54 0 639 178 0 0 chr10 41954750 41954924 -98361841 + (GAATG)n Satellite Satellite 2 175 0 876 133 0 0 chr10 41954950 41955130 -98361635 + (GAATG)n Satellite Satellite 1 180 0 786 149 3 18 chr10 41955144 41955478 -98361287 + (GAATG)n Satellite Satellite 1 329 0 918 151 0 0 chr10 41955492 41956032 -98360733 + (GAATG)n Satellite Satellite 1 540 0 827 169 0 14 chr10 41956061 41956424 -98360341 + (GAATG)n Satellite Satellite 1 357 0 931 103 7 18 chr10 41956440 41956805 -98359960 + (GAATG)n Satellite Satellite 1 540 0 270 125 0 0 chr10 41956816 41956864 -98359901 + (GAATG)n Satellite Satellite 2 49 0 865 151 8 13 chr10 41956880 41957284 -98359481 + (GAATG)n Satellite Satellite 1 402 0 747 140 0 0 chr10 41957335 41957492 -98359273 + (GAATG)n Satellite Satellite 1 157 0 1002 133 0 2 chr10 41957547 41957901 -98358864 + (GAATG)n Satellite Satellite 1 533 0 972 143 0 0 chr10 41957912 41958200 -98358565 + (GAATG)n Satellite Satellite 1 288 0 927 162 6 0 chr10 41958227 41958577 -98358188 + (GAATG)n Satellite Satellite 1 352 0 1092 117 0 6 chr10 41958595 41958954 -98357811 + (GAATG)n Satellite Satellite 2 534 0 948 150 0 0 chr10 41958976 41959307 -98357458 + (GAATG)n Satellite Satellite 1 331 0 925 135 9 3 chr10 41959331 41959685 -98357080 + (GAATG)n Satellite Satellite 1 356 0 966 138 0 2 chr10 41959738 41960071 -98356694 + (GAATG)n Satellite Satellite 1 511 0 1122 139 2 0 chr10 41960098 41960725 -98356040 + (GAATG)n Satellite Satellite 1 628 0 966 146 2 4 chr10 41960742 41961763 -98355002 + (GAATG)n Satellite Satellite 1 1197 0 877 117 6 6 chr10 41961763 41961942 -98354823 + (GAATG)n Satellite Satellite 2 180 0 966 122 0 0 chr10 41962222 41962402 -98354363 + (GAATG)n Simple_repeat Simple_repeat 1 180 0 1011 125 0 2 chr10 41962648 41963096 -98353669 + (GAATG)n Satellite Satellite 1 626 0 680 168 4 0 chr10 41963113 41963390 -98353375 + (GAATG)n Satellite Satellite 1 278 0 846 160 2 10 chr10 41963432 41964028 -98352737 + (GAATG)n Satellite Satellite 1 590 0 972 139 0 0 chr10 41964055 41964465 -98352300 + (GAATG)n Satellite Satellite 1 410 0 1065 143 0 0 chr10 41964477 41965019 -98351746 + (GAATG)n Satellite Satellite 1 542 0 273 89 0 0 chr10 41965030 41965075 -98351690 + (GAATG)n Satellite Satellite 1 45 0 939 125 0 0 chr10 41965099 41965267 -98351498 + (GAATG)n Satellite Satellite 4 171 0 714 167 0 0 chr10 41965295 41965475 -98351290 + (GAATG)n Satellite Satellite 1 180 0 815 141 0 6 chr10 41965496 41965673 -98351092 + (GAATG)n Satellite Satellite 4 179 0 1050 149 0 4 chr10 41965691 41966347 -98350418 + (GAATG)n Satellite Satellite 1 831 0 754 118 0 54 chr10 41966361 41966547 -98350218 + (GAATG)n Satellite Satellite 4 179 0 598 183 6 6 chr10 41966560 41966740 -98350025 + (GAATG)n Satellite Satellite 1 180 0 774 140 3 10 chr10 41966769 41967175 -98349590 + (GAATG)n Satellite Satellite 1 402 0 1032 142 0 0 chr10 41967187 41967476 -98349289 + (GAATG)n Satellite Satellite 1 289 0 1006 132 3 5 chr10 41967493 41967934 -98348831 + (GAATG)n Satellite Satellite 1 619 0 1070 116 4 3 chr10 41967951 41968481 -98348284 + (GAATG)n Satellite Satellite 1 710 0 771 156 0 0 chr10 41968521 41968700 -98348065 + (GAATG)n Satellite Satellite 1 179 0 984 126 0 21 chr10 41968711 41969138 -98347627 + (GAATG)n Satellite Satellite 1 591 0 396 228 0 0 chr10 41969150 41969321 -98347444 + (GAATG)n Satellite Satellite 4 174 0 743 158 3 0 chr10 41969354 41969650 -98347115 + (GAATG)n Satellite Satellite 1 297 0 746 166 2 14 chr10 41969668 41970110 -98346655 + (GAATG)n Satellite Satellite 1 436 0 975 144 1 5 chr10 41970129 41971181 -98345584 + (GAATG)n Satellite Satellite 1 1227 0 700 157 3 3 chr10 41971242 41971549 -98345216 + (GAATG)n Satellite Satellite 1 307 0 969 135 0 0 chr10 41971562 41971904 -98344861 + (GAATG)n Satellite Satellite 1 342 0 1011 144 0 9 chr10 41971961 41972939 -98343826 + (GAATG)n Satellite Satellite 1 1147 0 770 141 0 27 chr10 41972976 41973161 -98343604 + (GAATG)n Satellite Satellite 1 180 0 732 160 0 0 chr10 41973182 41973589 -98343176 + (GAATG)n Satellite Satellite 1 407 0 978 117 0 0 chr10 41973602 41973781 -98342984 + (GAATG)n Satellite Satellite 1 179 0 642 174 0 0 chr10 41973801 41973973 -98342792 + (GAATG)n Satellite Satellite 4 175 0 924 133 0 0 chr10 41974026 41974206 -98342559 + (GAATG)n Satellite Satellite 1 180 0 703 146 6 6 chr10 41974231 41974409 -98342356 + (GAATG)n Satellite Satellite 3 180 0 255 79 0 0 chr10 41974450 41974488 -98342277 + (GAATG)n Satellite Satellite 4 41 0 858 167 2 11 chr10 41974505 41975057 -98341708 + (GAATG)n Satellite Satellite 1 546 0 483 177 0 0 chr10 41975069 41975199 -98341566 + (GAATG)n Satellite Satellite 2 131 0 799 141 6 6 chr10 41975219 41975396 -98341369 + (GAATG)n Satellite Satellite 4 180 0 237 98 0 0 chr10 41975406 41975447 -98341318 + (GACTG)n Simple_repeat Simple_repeat 2 42 0 989 108 6 0 chr10 41975482 41975658 -98341107 + (GAATG)n Satellite Satellite 4 180 0 894 150 0 6 chr10 41975703 41976038 -98340727 + (GAATG)n Satellite Satellite 3 509 0 970 126 4 14 chr10 41976050 41976415 -98340350 + (GAATG)n Satellite Satellite 1 540 0 294 87 0 0 chr10 41976438 41976484 -98340281 + (GAATG)n Satellite Satellite 2 47 0 903 146 4 4 chr10 41976506 41977984 -98338781 + (GAATG)n Satellite Satellite 1 1658 0 978 133 0 0 chr10 41978029 41978474 -98338291 + (GAATG)n Satellite Satellite 1 445 0 198 91 0 0 chr10 41978510 41978543 -98338222 + (GAATG)n Satellite Satellite 2 34 0 629 171 6 0 chr10 41978585 41978760 -98338005 + (GAATG)n Satellite Satellite 4 179 0 858 147 0 0 chr10 41978793 41979154 -98337611 + (GAATG)n Satellite Satellite 1 361 0 766 162 6 3 chr10 41979180 41979508 -98337257 + (GAATG)n Satellite Satellite 1 329 0 966 122 0 0 chr10 41979546 41979726 -98337039 + (GAATG)n Satellite Satellite 1 180 0 762 157 6 11 chr10 41979739 41980468 -98336297 + (GAATG)n Satellite Satellite 1 725 0 905 123 6 0 chr10 41980514 41980693 -98336072 + (GAATG)n Satellite Satellite 1 180 0 804 155 0 9 chr10 41980729 41981291 -98335474 + (GAATG)n Satellite Satellite 1 556 0 684 164 0 0 chr10 41981302 41981479 -98335286 + (GAATG)n Satellite Satellite 4 180 0 872 166 0 10 chr10 41981517 41982022 -98334743 + (GAATG)n Satellite Satellite 1 499 0 888 148 0 12 chr10 41982033 41982449 -98334316 + (GAATG)n Satellite Satellite 1 588 0 840 146 0 0 chr10 41982478 41982656 -98334109 + (GAATG)n Satellite Satellite 2 179 0 847 160 1 12 chr10 41982685 41983628 -98333137 + (GAATG)n Satellite Satellite 1 932 0 858 157 0 0 chr10 41983641 41984179 -98332586 + (GAATG)n Satellite Satellite 1 538 0 795 157 0 0 chr10 41984216 41984738 -98332027 + (GAATG)n Satellite Satellite 1 522 0 756 156 0 0 chr10 41984754 41984934 -98331831 + (GAATG)n Satellite Satellite 1 180 0 183 42 0 0 chr10 41984947 41984971 -98331794 + (GAATG)n Satellite Satellite 4 27 0 816 163 2 0 chr10 41984984 41985550 -98331215 + (GAATG)n Satellite Satellite 1 567 0 893 152 3 1 chr10 41985561 41986066 -98330699 + (GAATG)n Satellite Satellite 1 685 0 780 154 0 0 chr10 41986086 41986261 -98330504 + (GAATG)n Satellite Satellite 1 175 0 738 153 0 0 chr10 41986302 41986465 -98330300 + (GAATG)n Satellite Satellite 2 164 0 953 159 3 2 chr10 41986481 41987942 -98328823 + (GAATG)n Satellite Satellite 1 1462 0 885 152 0 6 chr10 41987987 41988621 -98328144 + (GAATG)n Satellite Satellite 1 630 0 1044 160 0 4 chr10 41988646 41989878 -98326887 + (GAATG)n Satellite Satellite 1 1226 0 828 136 0 0 chr10 41989892 41990068 -98326697 + (GAATG)n Satellite Satellite 4 179 0 864 163 0 0 chr10 41990086 41990414 -98326351 + (GAATG)n Satellite Satellite 1 328 0 693 168 0 0 chr10 41990457 41990636 -98326129 + (GAATG)n Satellite Satellite 2 180 0 789 150 0 0 chr10 41990652 41990832 -98325933 + (GAATG)n Satellite Satellite 1 180 0 861 155 0 0 chr10 41990851 41991092 -98325673 + (GAATG)n Satellite Satellite 1 241 0 1082 115 3 14 chr10 41991123 41991491 -98325274 + (GAATG)n Satellite Satellite 1 364 0 747 147 0 0 chr10 41991539 41991702 -98325063 + (GAATG)n Satellite Satellite 4 166 0 638 162 0 27 chr10 41991730 41991915 -98324850 + (GAATG)n Satellite Satellite 1 180 0 1059 132 6 5 chr10 41991930 41992641 -98324124 + (GAATG)n Satellite Satellite 1 891 0 717 168 0 0 chr10 41992665 41992844 -98323921 + (GAATG)n Satellite Satellite 1 179 0 886 95 0 53 chr10 41992884 41993074 -98323691 + (GAATG)n Satellite Satellite 1 180 0 718 136 0 28 chr10 41993120 41993296 -98323469 + (GAATG)n Satellite Satellite 4 174 0 912 146 0 0 chr10 41993318 41993623 -98323142 + (GAATG)n Satellite Satellite 1 305 0 1044 111 0 0 chr10 41993664 41993844 -98322921 + (GAATG)n Satellite Satellite 1 180 0 906 159 2 0 chr10 41993860 41994328 -98322437 + (GAATG)n Satellite Satellite 1 469 0 1056 157 2 4 chr10 41994368 41995762 -98321003 + (GAATG)n Satellite Satellite 1 1389 0 1023 148 0 1 chr10 41995786 41996641 -98320124 + (GAATG)n Satellite Satellite 1 1033 0 1014 136 0 0 chr10 41996652 41997022 -98319743 + (GAATG)n Satellite Satellite 1 370 0 587 174 0 27 chr10 41997057 41997241 -98319524 + (GAATG)n Satellite Satellite 2 180 0 922 147 1 7 chr10 41997253 41998344 -98318421 + (GAATG)n Satellite Satellite 4 1261 0 978 142 0 7 chr10 41998379 41999084 -98317681 + (GAATG)n Satellite Satellite 1 879 0 833 153 0 15 chr10 41999123 41999455 -98317310 + (GAATG)n Satellite Satellite 1 326 0 909 144 3 3 chr10 41999468 41999828 -98316937 + (GAATG)n Satellite Satellite 1 360 0 1155 140 2 2 chr10 41999840 42000959 -98315806 + (GAATG)n Satellite Satellite 1 1299 0 963 101 0 0 chr10 42001001 42001160 -98315605 + (GAATG)n Satellite Satellite 2 160 0 567 238 12 24 chr10 42201200 42201364 -98115401 + LOR1-int LTR ERV1 477 638 -5308 * 1211 167 12 12 chr10 42201350 42201601 -98115164 + LOR1-int LTR ERV1 1080 1330 -4616 * 2050 122 37 61 chr10 42201598 42201976 -98114789 + LOR1-int LTR ERV1 2003 2371 -5166 350 132 0 0 chr10 42201977 42202030 -98114735 + LOR1-int LTR ERV1 2511 2563 -4974 3684 60 45 0 chr10 42202041 42202510 -98114255 + LTR2B LTR ERV1 1 490 0 2090 90 4 0 chr10 42202554 42202820 -98113945 + AluSp SINE Alu 31 297 -16 320 134 75 0 chr10 42202820 42202887 -98113878 + LOR1-int LTR ERV1 2558 2629 -4908 * 365 148 0 0 chr10 42202878 42202939 -98113826 + LOR1-int LTR ERV1 2162 2222 -3724 3471 128 10 2 chr10 42202939 42203508 -98113257 + MER41B LTR ERV1 55 557 0 817 180 86 43 chr10 42203560 42203912 -98112853 + LOR1-int LTR ERV1 3689 4498 -2292 773 259 0 0 chr10 42203915 42204073 -98112692 - AluJb SINE Alu -24 288 131 181 225 12 12 chr10 42204088 42204168 -98112597 + (TA)n Simple_repeat Simple_repeat 2 81 0 1119 50 0 0 chr10 42204272 42204413 -98112352 + L1PA3 LINE L1 6015 6155 0 333 336 186 0 chr10 42205007 42205147 -98111618 - MER5A DNA MER1_type -1 188 23 498 203 97 60 chr10 42205314 42205531 -98111234 + L1MC4 LINE L1 7281 7505 -537 2132 117 0 29 chr10 42205863 42206179 -98110586 - AluSx SINE Alu -4 308 2 241 220 120 47 chr10 42207259 42207409 -98109356 + HAL1 LINE L1 1365 1525 -982 463 320 59 72 chr10 42207528 42207919 -98108846 + HAL1 LINE L1 1699 2084 -423 682 191 0 8 chr10 42209450 42209576 -98107189 + MSTB LTR MaLR 1 125 -301 240 91 0 0 chr10 42211902 42211935 -98104830 + Alu SINE Alu 1 33 -275 2261 92 0 35 chr10 42211935 42212249 -98104516 + AluY SINE Alu 7 309 -2 538 280 50 50 chr10 42212429 42212629 -98104136 + MIR SINE MIR 9 208 -54 264 320 60 10 chr10 42212696 42212796 -98103969 - MER5A DNA MER1_type -30 159 55 706 229 109 5 chr10 42212805 42213006 -98103759 - L1MD3 LINE L1 -44 7951 7730 205 267 27 27 chr10 42213006 42213081 -98103684 - MER5A DNA MER1_type -114 75 1 1141 106 0 2 chr10 42214104 42214340 -98102425 + AluSg1 SINE Alu 2 292 -18 20952 29 6 5 chr10 42214455 42217774 -98098991 + L1PA3 LINE L1 2682 6006 -149 1852 169 11 0 chr10 42217774 42218147 -98098618 - L1 LINE L1 -1318 4828 4452 603 177 0 0 chr10 42218141 42218254 -98098511 + L1P LINE L1 3762 3874 -2272 * 1287 49 0 0 chr10 42218257 42218419 -98098346 - L1PA2 LINE L1 0 6155 5994 1916 37 4 8 chr10 42218746 42218987 -98097778 + L1PA5 LINE L1 5911 6150 -4 2328 98 0 0 chr10 42219050 42219346 -98097419 - AluSx SINE Alu -16 296 1 5399 99 32 15 chr10 42219347 42219971 -98096794 - MER41B-int LTR ERV1 -2968 4751 4106 1920 157 0 16 chr10 42219971 42220284 -98096481 - AluSx SINE Alu -4 308 1 5399 99 32 15 chr10 42220284 42220525 -98096240 - MER41B-int LTR ERV1 -3613 4106 3871 739 125 17 0 chr10 42220979 42221099 -98095666 - MER41B-int LTR ERV1 -4745 1201 1080 * 4068 125 11 5 chr10 42221094 42221719 -98095046 - MER41B-int LTR ERV1 -5317 629 1 3819 142 26 2 chr10 42221719 42222339 -98094426 - MER41B LTR ERV1 0 635 1 23 0 0 0 chr10 42222556 42222579 -98094186 + AT_rich Low_complexity Low_complexity 1 23 0 293 155 0 0 chr10 42222748 42222806 -98093959 - MER4B-int LTR ERV1 -3874 2884 2827 2072 114 3 10 chr10 42222862 42223160 -98093605 + AluSx SINE Alu 1 296 -16 1682 98 4 0 chr10 42223261 42223486 -98093279 + AluSq SINE Alu 82 307 -6 23 33 0 0 chr10 42223946 42223976 -98092789 + AT_rich Low_complexity Low_complexity 1 30 0 1232 181 104 30 chr10 42224039 42224309 -98092456 + AluSq SINE Alu 1 290 -23 1302 209 195 8 chr10 42224374 42224964 -98091801 + Charlie1 DNA MER1_type 1881 2580 -181 669 263 6 0 chr10 42224980 42225136 -98091629 + MER20 DNA MER1_type 60 216 -3 1751 164 0 17 chr10 42225771 42226064 -98090701 - AluSx SINE Alu -24 288 1 24 32 0 0 chr10 42226243 42226274 -98090491 + AT_rich Low_complexity Low_complexity 1 31 0 325 183 69 122 chr10 42226664 42226795 -98089970 - MIR3 SINE MIR -1 207 84 496 272 41 47 chr10 42226833 42227002 -98089763 - MER5B DNA MER1_type 0 178 11 2139 128 0 0 chr10 42227734 42228022 -98088743 - AluSq SINE Alu -25 288 1 6316 65 24 5 chr10 42228028 42228910 -98087855 - L1PA7 LINE L1 -2 6152 5254 22 70 0 0 chr10 42230201 42230244 -98086521 + AT_rich Low_complexity Low_complexity 1 43 0 2441 192 7 22 chr10 42231367 42231970 -98084795 - L1 LINE L1 -1685 4461 3868 40372 37 22 1 chr10 42231973 42238001 -98078764 + L1PA2 LINE L1 2 6155 0 603 177 0 0 chr10 42238004 42238117 -98078648 - L1P LINE L1 -2272 3874 3762 * 5291 157 25 3 chr10 42238111 42239771 -98076994 + L1PB1 LINE L1 4452 6149 -2 1035 164 18 0 chr10 42239894 42240065 -98076700 - AluJo SINE Alu -16 296 123 266 0 0 0 chr10 42240080 42240117 -98076648 - L1PA3 LINE L1 -3 6152 6116 239 132 0 0 chr10 42240117 42240155 -98076610 - AluJo SINE Alu -178 124 87 310 360 110 24 chr10 42240404 42240732 -98076033 + HAL1 LINE L1 4 359 -2148 293 277 218 39 chr10 42240876 42241161 -98075604 + HAL1 LINE L1 575 910 -1597 408 271 40 60 chr10 42241252 42241403 -98075362 + HAL1 LINE L1 1146 1293 -1214 282 236 101 27 chr10 42241422 42241570 -98075195 + HAL1 LINE L1 1367 1525 -982 537 315 54 67 chr10 42241689 42242080 -98074685 + HAL1 LINE L1 1699 2084 -423 255 222 56 0 chr10 42242233 42242305 -98074460 + HAL1 LINE L1 2097 2172 -335 1891 192 28 35 chr10 42243609 42243786 -98072979 + MSTB LTR MaLR 1 178 -248 21776 30 7 10 chr10 42243786 42247207 -98069558 + L1PA3 LINE L1 2734 6155 0 1891 192 28 35 chr10 42247207 42247451 -98069314 + MSTB LTR MaLR 178 419 -7 660 184 0 57 chr10 42248414 42248555 -98068210 + FLAM_A SINE Alu 1 133 0 183 211 19 39 chr10 42248767 42248819 -98067946 + MIR SINE MIR 99 149 -59 1690 94 4 0 chr10 42249182 42249417 -98067348 - L1PA8 LINE L1 -1 6171 5936 321 290 125 99 chr10 42250820 42251517 -98065248 + L1M2 LINE L1 561 1275 -5574 445 266 158 30 chr10 42252060 42252263 -98064502 - MIR SINE MIR 0 262 34 2187 153 27 21 chr10 42252289 42252662 -98064103 - THE1C LTR MaLR 0 375 1 232 314 162 29 chr10 42252772 42252835 -98063930 - MIR SINE MIR -9 253 200 2285 92 3 0 chr10 42252835 42253128 -98063637 - AluY SINE Alu -17 294 1 232 314 162 29 chr10 42253128 42253268 -98063497 - MIR SINE MIR -62 200 23 302 298 75 0 chr10 42254124 42254218 -98062547 + L2 LINE L2 3197 3297 -16 227 369 82 21 chr10 42254342 42254621 -98062144 - L2 LINE L2 -1486 1828 1533 2203 111 7 3 chr10 42255444 42255742 -98061023 - AluSg SINE Alu -11 299 1 354 340 0 48 chr10 42256014 42256161 -98060604 - L2 LINE L2 0 3313 3174 542 253 74 30 chr10 42256178 42256364 -98060401 - MLT1J LTR MaLR -211 300 60 1067 196 4 75 chr10 42259341 42259607 -98057158 + AluJb SINE Alu 21 267 -45 1464 228 21 34 chr10 42259628 42260006 -98056759 + MER93b LTR ERV1 1 373 0 2875 204 59 43 chr10 42260090 42260859 -98055906 + L1MC1 LINE L1 5558 6333 0 270 0 0 0 chr10 42261842 42261872 -98054893 + (CA)n Simple_repeat Simple_repeat 2 31 0 2114 137 0 0 chr10 42262068 42262374 -98054391 + AluSq SINE Alu 1 306 -7 218 179 0 15 chr10 42262808 42262875 -98053890 + (CA)n Simple_repeat Simple_repeat 2 67 0 736 240 32 5 chr10 42263285 42263478 -98053287 - MSTD LTR MaLR -11 418 216 251 196 89 80 chr10 42263547 42263659 -98053106 - L1MC5 LINE L1 -840 7121 7009 449 245 10 0 chr10 42263673 42263771 -98052994 - MSTD LTR MaLR -297 99 1 2740 146 43 5 chr10 42263777 42264222 -98052543 - MER4C LTR ERV1 -3 462 1 1277 263 70 48 chr10 42264224 42264791 -98051974 - L1MC5 LINE L1 -746 7215 6636 219 342 33 25 chr10 42265032 42265152 -98051613 + L2 LINE L2 3142 3262 -10 22 56 0 0 chr10 42265913 42265949 -98050816 + AT_rich Low_complexity Low_complexity 1 36 0 273 88 0 0 chr10 42265995 42266029 -98050736 + U6 snRNA snRNA 1 34 -73 2020 109 27 10 chr10 42266306 42266600 -98050165 + AluSx SINE Alu 1 299 -13 2354 106 0 3 chr10 42266963 42267275 -98049490 + AluSx SINE Alu 1 311 -1 340 212 11 123 chr10 42267447 42267495 -98049270 + L1MC4a LINE L1 5859 5911 -1897 201 74 0 0 chr10 42267495 42267522 -98049243 + (TA)n Simple_repeat Simple_repeat 2 28 0 340 212 11 123 chr10 42267522 42267652 -98049113 + L1MC4a LINE L1 5911 6017 -1791 2385 197 52 84 chr10 42267672 42267847 -98048918 + L1MC4a LINE L1 6246 6425 -1383 321 26 0 0 chr10 42267847 42267885 -98048880 + (CA)n Simple_repeat Simple_repeat 2 39 0 2385 197 52 84 chr10 42267885 42268385 -98048380 + L1MC4a LINE L1 6425 6899 -909 1948 105 91 108 chr10 42268388 42268805 -98047960 + LTR14B LTR ERVK 1 608 0 1933 236 102 79 chr10 42268807 42269698 -98047067 + L1MC4a LINE L1 6896 7807 -1 518 290 31 6 chr10 42270388 42270550 -98046215 - MER58A DNA MER1_type -12 212 47 766 222 33 22 chr10 42271527 42271707 -98045058 - Tigger2 DNA MER2_type -4 2714 2533 458 289 82 83 chr10 42273280 42273819 -98042946 - L1 LINE L1 -2368 3778 3241 323 208 136 45 chr10 42274066 42274330 -98042435 - L1 LINE L1 -2789 3357 3070 2053 101 42 3 chr10 42274344 42274631 -98042134 + AluSq SINE Alu 2 299 -14 306 356 0 0 chr10 42275325 42275429 -98041336 + (CA)n Simple_repeat Simple_repeat 2 105 0 869 217 0 0 chr10 42276755 42276930 -98039835 - AluJb SINE Alu -1 311 137 2304 110 10 0 chr10 42277440 42277750 -98039015 + AluSp SINE Alu 1 313 0 2266 119 0 3 chr10 42277752 42278054 -98038711 + AluSp SINE Alu 1 301 -12 1732 162 7 0 chr10 42278289 42278561 -98038204 + AluSx SINE Alu 1 274 -38 2132 108 0 3 chr10 42278657 42279018 -98037747 + AluSq SINE Alu 1 360 0 1066 193 57 34 chr10 42279446 42279710 -98037055 + MER92B LTR ERV1 2 271 -365 320 304 42 70 chr10 42280263 42280389 -98036376 - L2 LINE L2 -40 3273 3145 2269 103 3 6 chr10 42280389 42280701 -98036064 + AluY SINE Alu 1 311 0 320 304 42 70 chr10 42280701 42280860 -98035905 - L2 LINE L2 -168 3145 2996 1962 146 7 0 chr10 42281136 42281424 -98035341 + AluSx SINE Alu 1 290 -22 197 274 113 0 chr10 42282006 42282068 -98034697 + MIR SINE MIR 70 138 -70 335 172 35 0 chr10 42283022 42283080 -98033685 + MER2 DNA MER2_type 1 60 -285 2220 199 57 28 chr10 42283080 42283573 -98033192 + MER9 LTR ERVK 1 507 -4 33986 142 9 8 chr10 42283577 42288985 -98027780 + HERVK9 LTR ERVK 1 5181 -735 2096 256 56 44 chr10 42288962 42290662 -98026103 + HERVK9 LTR ERVK 3536 5912 -4 * 2197 196 61 26 chr10 42290665 42291159 -98025606 + MER9 LTR ERVK 1 511 0 427 333 0 0 chr10 42291162 42291282 -98025483 + MER8 DNA MER2_type 57 176 -63 314 225 28 0 chr10 42291312 42291383 -98025382 + MER8 DNA MER2_type 165 237 -2 3947 111 0 4 chr10 42291455 42291968 -98024797 + MER9 LTR ERVK 1 511 0 42623 74 21 17 chr10 42291968 42292735 -98024030 + HERVK9 LTR ERVK 1 763 -5153 191 228 0 88 chr10 42292735 42292792 -98023973 + MER5B DNA MER1_type 58 109 -69 42623 74 21 17 chr10 42292792 42293658 -98023107 + HERVK9 LTR ERVK 763 1624 -4292 2404 65 0 3 chr10 42293658 42293950 -98022815 + AluY SINE Alu 1 291 -20 42623 74 21 17 chr10 42293950 42294788 -98021977 + HERVK9 LTR ERVK 1624 2457 -3459 243 0 0 0 chr10 42294788 42294815 -98021950 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 42623 74 21 17 chr10 42294815 42297891 -98018874 + HERVK9 LTR ERVK 2457 5632 -284 2267 68 7 0 chr10 42297989 42298269 -98018496 + HERVK9 LTR ERVK 5635 5916 0 3820 119 0 4 chr10 42298269 42298782 -98017983 + MER9 LTR ERVK 1 511 0 455 139 56 0 chr10 42298895 42299006 -98017759 + AluSp/q SINE Alu 208 322 0 2261 108 0 9 chr10 42299136 42299451 -98017314 - AluSx SINE Alu 0 312 1 1202 237 124 5 chr10 42302216 42302626 -98014139 + L1MDa LINE L1 1970 2428 -4112 3730 117 4 12 chr10 42302630 42303145 -98013620 - MER9 LTR ERVK 0 511 1 2208 123 4 3 chr10 42303145 42303468 -98013297 - HERVK9 LTR ERVK 0 5916 4936 7559 114 2 8 chr10 42303523 42304582 -98012183 - HERVK9 LTR ERVK -282 5634 4582 1612 81 45 5 chr10 42304581 42304803 -98011962 - HERVK9 LTR ERVK -1975 3941 3711 * 10687 71 4 1 chr10 42304803 42306221 -98010544 - HERVK9 LTR ERVK -3130 2786 1268 4285 75 52 0 chr10 42306221 42306784 -98009981 - HERVK9 LTR ERVK -5324 592 1 3984 105 0 4 chr10 42306784 42307297 -98009468 - MER9 LTR ERVK 0 511 1 1295 152 134 122 chr10 42308316 42308750 -98008015 - LOR1a LTR ERV1 0 497 59 1758 144 155 43 chr10 42308750 42309124 -98007641 + MSTA LTR MaLR 4 419 -9 330 154 0 132 chr10 42309116 42309207 -98007558 - LOR1a LTR ERV1 -418 79 1 * 560 226 211 88 chr10 42309394 42309862 -98006903 - L1M4 LINE L1 -766 5380 4855 225 270 0 0 chr10 42309955 42310018 -98006747 - L1M4 LINE L1 -1542 4604 4542 6505 101 52 8 chr10 42310186 42311190 -98005575 - L1MA3 LINE L1 0 6305 5258 647 215 31 8 chr10 42311209 42311339 -98005426 + MSTA LTR MaLR 1 133 -293 798 98 16 8 chr10 42311480 42311602 -98005163 - L1MA3 LINE L1 0 6305 6183 1571 150 39 0 chr10 42311616 42311876 -98004889 + MSTA LTR MaLR 159 428 0 3308 168 34 2 chr10 42311876 42312490 -98004275 - L1 LINE L1 -903 5243 4610 1821 176 7 7 chr10 42312540 42312842 -98003923 - AluJb SINE Alu -10 302 1 758 271 209 8 chr10 42312843 42313212 -98003553 - L1MC4 LINE L1 -1129 6913 6471 607 261 73 41 chr10 42313423 42313764 -98003001 - L1 LINE L1 -2299 3847 3496 1799 164 39 0 chr10 42314376 42314657 -98002108 - AluSx SINE Alu -20 292 1 2295 82 41 0 chr10 42315227 42315519 -98001246 + AluY SINE Alu 7 310 -1 1866 181 0 0 chr10 42317930 42318217 -97998548 - AluSx SINE Alu -25 287 1 205 293 0 35 chr10 42318866 42318924 -97997841 - MER5A DNA MER1_type -18 171 116 1410 175 13 80 chr10 42318969 42319283 -97997482 - AluJo SINE Alu -17 295 3 23 0 0 0 chr10 42319363 42319386 -97997379 + AT_rich Low_complexity Low_complexity 1 23 0 421 217 50 89 chr10 42319389 42319569 -97997196 + L1ME3 LINE L1 5990 6162 0 252 0 0 0 chr10 42319961 42319989 -97996776 + (CA)n Simple_repeat Simple_repeat 2 29 0 391 214 34 0 chr10 42321036 42321125 -97995640 - Charlie7 DNA MER1_type -2470 142 51 1670 120 0 0 chr10 42321609 42321834 -97994931 + AluSx SINE Alu 63 287 -25 2172 116 13 7 chr10 42321943 42322253 -97994512 + AluSq SINE Alu 1 312 -1 479 254 34 54 chr10 42322461 42322492 -97994273 + L1M4c LINE L1 611 641 -6005 948 78 86 0 chr10 42322492 42322620 -97994145 + MER85 DNA T2_type 1 139 0 479 254 34 54 chr10 42322620 42322755 -97994010 + L1M4c LINE L1 641 926 -5720 252 0 0 0 chr10 42322759 42322787 -97993978 + (TTA)n Simple_repeat Simple_repeat 3 30 0 42843 43 24 1 chr10 42322787 42328780 -97987985 - L1PA3 LINE L1 -18 6137 2 296 203 0 0 chr10 42328877 42328941 -97987824 + T-rich Low_complexity Low_complexity 1 64 0 3404 233 62 19 chr10 42328962 42330094 -97986671 + L1M4c LINE L1 829 2015 -4631 508 115 52 21 chr10 42330230 42330326 -97986439 + L1MA3 LINE L1 6032 6130 -175 * 32939 105 13 54 chr10 42330306 42336720 -97980045 - L1PA7 LINE L1 -5 6149 10 1089 110 58 31 chr10 42336732 42336923 -97979842 + L1MA3 LINE L1 6110 6305 0 5921 239 69 32 chr10 42336936 42339079 -97977686 + L1M4c LINE L1 2696 4916 -1728 655 204 35 14 chr10 42339079 42339221 -97977544 + MLT1A1 LTR MaLR 1 145 -220 2221 117 3 0 chr10 42339511 42339809 -97976956 + AluSp SINE Alu 1 299 -14 1762 184 103 19 chr10 42339832 42340261 -97976504 + L1MC4 LINE L1 6464 6928 -1114 3711 237 57 42 chr10 42340457 42342673 -97974092 + L1MB2 LINE L1 330 2681 -3963 2121 127 0 35 chr10 42342673 42342988 -97973777 + AluSg SINE Alu 1 304 -6 3711 237 57 42 chr10 42342988 42343250 -97973515 + L1MB2 LINE L1 2681 2938 -3706 * 4911 175 38 9 chr10 42343249 42344585 -97972180 + L1MB2 LINE L1 5119 6633 -36 1136 224 47 16 chr10 42344595 42344917 -97971848 + L1MB5 LINE L1 4077 4408 -1738 829 189 33 7 chr10 42344917 42345070 -97971695 - MER58B DNA MER1_type -43 298 142 698 203 80 47 chr10 42345070 42345346 -97971419 + L1MB5 LINE L1 4387 4671 -1475 3114 150 36 54 chr10 42345348 42345962 -97970803 + L1MB5 LINE L1 5566 6168 -6 2456 92 0 0 chr10 42346128 42346434 -97970331 - AluSg SINE Alu -4 306 1 1476 231 55 9 chr10 42346682 42347007 -97969758 - MER58B DNA MER1_type 0 341 2 2270 103 0 3 chr10 42347556 42347857 -97968908 - AluSg SINE Alu -9 301 2 1600 141 11 40 chr10 42350040 42350199 -97966566 + L1PB3 LINE L1 5878 6027 -127 2024 123 44 0 chr10 42350199 42350492 -97966273 + AluSq SINE Alu 1 306 -7 1600 141 11 40 chr10 42350492 42350608 -97966157 + L1PB3 LINE L1 6027 6145 -9 2393 67 0 10 chr10 42350677 42350974 -97965791 - AluSc SINE Alu -15 294 1 2300 101 13 0 chr10 42351159 42351465 -97965300 - AluSg SINE Alu 0 310 1 2133 125 0 3 chr10 42351513 42351809 -97964956 - AluSx SINE Alu -17 295 1 1415 169 154 0 chr10 42353035 42353295 -97963470 - AluSx SINE Alu -12 300 1 1837 148 13 26 chr10 42354605 42354915 -97961850 - AluSx SINE Alu -6 306 1 2144 142 0 10 chr10 42355319 42355630 -97961135 + AluSc SINE Alu 1 308 -1 2164 213 80 10 chr10 42355658 42356160 -97960605 + MER68 LTR ERV1 26 562 0 1616 154 0 68 chr10 42356190 42356483 -97960282 - AluJo SINE Alu -39 273 1 321 241 128 15 chr10 42356534 42356667 -97960098 + HERVL68 LTR ERVL 2 149 -2888 269 279 0 70 chr10 42356749 42356835 -97959930 + HERVL68 LTR ERVL 347 426 -2611 180 97 0 0 chr10 42356856 42356887 -97959878 + (TGGG)n Simple_repeat Simple_repeat 1 31 0 2454 194 64 41 chr10 42356985 42357625 -97959140 + HERVL68 LTR ERVL 598 1252 -1785 5735 124 26 20 chr10 42357954 42358860 -97957905 + MER49 LTR ERV1 1 912 -11 2099 128 0 0 chr10 42358862 42359189 -97957576 - AluSq SINE Alu 0 327 1 1716 99 21 4 chr10 42359441 42359684 -97957081 - L1PA13 LINE L1 -2 6161 5915 1092 152 0 0 chr10 42359684 42359849 -97956916 + L1PA12 LINE L1 1949 2113 -5468 648 293 60 7 chr10 42359886 42360391 -97956374 + MLT1G LTR MaLR 1 561 -29 196 297 27 0 chr10 42360581 42360655 -97956110 - MIR SINE MIR -10 252 177 462 285 109 65 chr10 42361799 42362339 -97954426 + HSATI Satellite Satellite 1 564 -13 254 265 31 10 chr10 42362420 42362518 -97954247 + L1M4 LINE L1 3652 3751 -2395 29 90 0 0 chr10 42362610 42362688 -97954077 + AT_rich Low_complexity Low_complexity 1 78 0 357 196 26 96 chr10 42362688 42362851 -97953914 + MER4B-int LTR ERV1 2555 2728 -2395 2325 77 3 0 chr10 42362851 42363138 -97953627 + AluY SINE Alu 1 288 -23 243 0 0 0 chr10 42363141 42363168 -97953597 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 357 196 26 96 chr10 42363168 42363185 -97953580 + MER4B-int LTR ERV1 2679 2696 -2427 22 0 0 0 chr10 42363195 42363217 -97953548 + AT_rich Low_complexity Low_complexity 1 22 0 346 138 15 0 chr10 42364256 42364321 -97952444 + MER4B-int LTR ERV1 2406 2471 -4287 467 262 47 26 chr10 42364412 42364603 -97952162 + MER4B-int LTR ERV1 3536 3730 -2868 626 65 39 0 chr10 42364611 42364688 -97952077 + MADE1 DNA Mariner 1 80 0 414 171 16 24 chr10 42364731 42364851 -97951914 + MER4B-int LTR ERV1 3698 4457 -423 2198 164 64 3 chr10 42365110 42365487 -97951278 + MSTA LTR MaLR 1 400 -28 2271 109 7 0 chr10 42365508 42365801 -97950964 - AluSg SINE Alu -15 295 1 241 154 0 0 chr10 42365801 42365840 -97950925 + MSTA LTR MaLR 390 428 0 9529 166 28 29 chr10 42365840 42366244 -97950521 + MSTA-int LTR MaLR 1 404 -1247 1508 210 0 11 chr10 42366244 42366571 -97950194 + AluJb SINE Alu 1 324 0 9529 166 28 29 chr10 42366571 42367817 -97948948 + MSTA-int LTR MaLR 404 1651 0 2740 150 31 0 chr10 42367817 42368231 -97948534 + MSTA LTR MaLR 1 427 -1 271 336 0 27 chr10 42368504 42368614 -97948151 + MIR SINE MIR 41 147 -61 304 310 110 45 chr10 42368809 42369054 -97947711 - MIR SINE MIR -1 261 1 635 228 83 10 chr10 42369696 42369889 -97946876 - L1MC2 LINE L1 0 6344 6138 3085 121 36 16 chr10 42370166 42370664 -97946101 - MER49 LTR ERV1 -415 508 1 513 216 197 56 chr10 42371868 42372081 -97944684 + MLT1C LTR MaLR 263 467 0 213 39 0 0 chr10 42372270 42372296 -97944469 + (TA)n Simple_repeat Simple_repeat 2 27 0 1942 125 7 17 chr10 42372296 42372455 -97944310 - AluSx SINE Alu -19 293 137 2013 86 8 0 chr10 42372455 42372711 -97944054 - AluSq SINE Alu -17 296 39 1942 125 7 17 chr10 42372711 42372847 -97943918 - AluSx SINE Alu -175 137 1 243 196 43 0 chr10 42373204 42373250 -97943515 - MER5A DNA MER1_type -83 106 59 2333 111 0 0 chr10 42373409 42373715 -97943050 + AluSx SINE Alu 1 306 -6 229 179 60 30 chr10 42373738 42373805 -97942960 - MER76 LTR ERV -18 670 602 928 149 0 7 chr10 42375766 42375914 -97940851 - L1PA16 LINE L1 -9 6157 6011 2047 146 10 0 chr10 42376788 42377096 -97939669 - AluSx SINE Alu -1 311 1 1748 108 104 0 chr10 42377199 42377484 -97939281 + AluSg1 SINE Alu 3 313 0 2025 108 77 0 chr10 42377762 42378048 -97938717 + AluSq SINE Alu 1 308 -5 2168 123 0 3 chr10 42378391 42378692 -97938073 + AluSx SINE Alu 1 300 -12 2286 98 3 0 chr10 42381084 42381379 -97935386 - AluSq SINE Alu -17 296 1 2416 70 13 0 chr10 42382709 42383007 -97933758 - AluY SINE Alu -9 302 1 649 149 0 37 chr10 42383007 42383114 -97933651 - FRAM SINE Alu -20 156 54 795 216 14 110 chr10 42383373 42383749 -97933016 - MLT1A1 LTR MaLR 0 428 39 1906 104 12 0 chr10 42383757 42384027 -97932738 - AluSx SINE Alu 0 301 29 245 95 0 48 chr10 42384109 42384151 -97932614 - MLT1A1 LTR MaLR -386 42 3 1863 262 32 2 chr10 42385036 42385529 -97931236 - LTR53 LTR ERVL -1 518 11 2415 165 76 34 chr10 42385695 42386197 -97930568 - L1MC2 LINE L1 -11 6333 5811 1664 230 52 30 chr10 42386183 42386687 -97930078 - L1M4 LINE L1 -1820 4326 3812 * 1101 229 23 11 chr10 42386688 42386950 -97929815 - L1M4 LINE L1 -2391 3755 3491 1268 116 0 6 chr10 42386954 42387126 -97929639 - AluSg/x SINE Alu -23 289 119 1097 235 122 10 chr10 42387143 42387552 -97929213 - L1M4 LINE L1 -2640 3506 3052 272 322 55 20 chr10 42387825 42387971 -97928794 + MER115 DNA AcHobo 317 467 -226 346 260 65 24 chr10 42387976 42388099 -97928666 + Zaphod DNA AcHobo 3904 4031 0 207 100 0 0 chr10 42388489 42388519 -97928246 + (CA)n Simple_repeat Simple_repeat 1 30 0 460 205 121 42 chr10 42388529 42388719 -97928046 + L1MD3 LINE L1 7789 7993 -2 191 35 0 35 chr10 42391429 42391458 -97925307 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 873 232 130 40 chr10 42392058 42392476 -97924289 + MLT1B LTR MaLR 1 386 -4 27 29 0 0 chr10 42392632 42392666 -97924099 + AT_rich Low_complexity Low_complexity 1 34 0 1734 267 83 35 chr10 42392910 42393763 -97923002 - L1MEc LINE L1 -1389 4826 3933 5335 208 107 36 chr10 42393768 42395242 -97921523 - MER45R DNA AcHobo 0 1581 4 1675 250 164 22 chr10 42395244 42395976 -97920789 - L1MEc LINE L1 -2279 3936 3101 226 164 36 0 chr10 42395997 42396052 -97920713 + (TA)n Simple_repeat Simple_repeat 2 58 0 22 0 0 0 chr10 42396092 42396114 -97920651 + AT_rich Low_complexity Low_complexity 1 22 0 406 197 66 33 chr10 42396250 42396372 -97920393 + L1M4 LINE L1 3033 3158 -2988 1778 255 69 42 chr10 42396429 42397238 -97919527 - L1MEc LINE L1 -3185 3030 2200 3167 273 65 50 chr10 42397274 42398027 -97918738 - L1MEc LINE L1 -4401 1995 1255 2153 125 7 3 chr10 42398027 42398330 -97918435 - AluSc SINE Alu -5 304 1 3167 273 65 50 chr10 42398330 42398464 -97918301 - L1MEc LINE L1 -5141 1255 1124 1835 138 0 45 chr10 42398464 42398775 -97917990 - AluJb SINE Alu -5 307 11 3167 273 65 50 chr10 42398775 42399496 -97917269 - L1MEc LINE L1 -5272 1124 362 3401 234 63 82 chr10 42399496 42400721 -97916044 + L1M4b LINE L1 -228 1018 -5262 2157 121 7 7 chr10 42400721 42401028 -97915737 + AluSx SINE Alu 1 307 -5 3401 234 63 82 chr10 42401028 42401189 -97915576 + L1M4b LINE L1 1018 1108 -5172 2083 118 0 26 chr10 42401189 42401502 -97915263 + AluSq SINE Alu 1 305 -8 3401 234 63 82 chr10 42401502 42401714 -97915051 + L1M4b LINE L1 1108 1322 -4958 414 263 10 0 chr10 42401717 42401816 -97914949 + U6 snRNA snRNA 2 101 -6 26 0 0 0 chr10 42401816 42401842 -97914923 + AT_rich Low_complexity Low_complexity 1 26 0 509 258 69 92 chr10 42401867 42402367 -97914398 + L1M4b LINE L1 1454 2103 -4460 1669 186 17 24 chr10 42402372 42402668 -97914097 + AluJb SINE Alu 1 294 -18 233 228 0 0 chr10 42402677 42402734 -97914031 + A-rich Low_complexity Low_complexity 1 57 0 2123 135 0 0 chr10 42402741 42403037 -97913728 + AluSx SINE Alu 1 296 -16 384 221 97 94 chr10 42403057 42403196 -97913569 + L1MEc LINE L1 1731 1868 -4528 1067 149 75 6 chr10 42403196 42403370 -97913395 + L1PA8A LINE L1 5946 6131 0 384 221 97 94 chr10 42403370 42403398 -97913367 + L1MEc LINE L1 1868 1894 -4502 1431 129 47 34 chr10 42403398 42403631 -97913134 - MER46A DNA MER2_type 0 236 1 384 221 97 94 chr10 42403631 42403888 -97912877 + L1MEc LINE L1 1894 2145 -4251 1214 165 33 19 chr10 42403888 42404100 -97912665 + L1PB4 LINE L1 5942 6156 0 384 221 97 94 chr10 42404100 42404197 -97912568 + L1MEc LINE L1 2145 2240 -4156 311 200 15 15 chr10 42404197 42404262 -97912503 - Tigger5 DNA MER2_type 0 2323 2259 349 182 0 0 chr10 42404366 42404421 -97912344 - Tigger5 DNA MER2_type -2268 55 1 7843 252 89 24 chr10 42404447 42405696 -97911069 + L1MEc LINE L1 2224 3391 -2824 1907 163 3 10 chr10 42405696 42406003 -97910762 + AluJb SINE Alu 5 309 -3 7843 252 89 24 chr10 42406003 42406812 -97909953 + L1MEc LINE L1 3391 4146 -2069 1994 137 0 7 chr10 42406812 42407120 -97909645 + AluSq SINE Alu 1 306 0 7843 252 89 24 chr10 42407120 42407621 -97909144 + L1MEc LINE L1 4146 4613 -1602 2171 119 16 10 chr10 42407621 42407924 -97908841 + AluSg SINE Alu 1 305 -5 7843 252 89 24 chr10 42407924 42408351 -97908414 + L1MEc LINE L1 4613 5407 -808 2336 257 98 34 chr10 42408345 42408792 -97907973 - L1M4 LINE L1 -1820 4562 4145 * 2061 136 3 3 chr10 42408792 42409094 -97907671 - AluSx SINE Alu -10 302 1 2336 257 98 34 chr10 42409094 42409533 -97907232 - L1M4 LINE L1 -2237 4145 3619 2670 188 60 53 chr10 42409550 42409822 -97906943 + L1MC3 LINE L1 6179 6447 -1338 1926 166 0 7 chr10 42409822 42410129 -97906636 + AluSx SINE Alu 1 305 -7 2670 188 60 53 chr10 42410129 42410536 -97906229 + L1MC3 LINE L1 6447 6863 -922 2878 196 47 7 chr10 42410551 42411152 -97905613 + L1MC3 LINE L1 7124 7748 -37 3240 211 31 51 chr10 42411170 42411234 -97905531 + L1MB8 LINE L1 5334 5398 -780 2271 99 3 0 chr10 42411234 42411528 -97905237 + AluSg SINE Alu 3 297 -13 3240 211 31 51 chr10 42411528 42412200 -97904565 + L1MB8 LINE L1 5398 6082 -96 2034 131 0 7 chr10 42412200 42412491 -97904274 + AluSx SINE Alu 1 289 -23 1677 113 58 91 chr10 42412499 42412808 -97903957 + AluSx SINE Alu 1 299 -13 3240 211 31 51 chr10 42412808 42412910 -97903855 + L1MB8 LINE L1 6089 6165 -13 2271 88 3 3 chr10 42413258 42413552 -97903213 - AluSc SINE Alu -15 294 1 3219 211 73 24 chr10 42413620 42413651 -97903114 - L1MD2 LINE L1 0 6359 6331 2220 135 0 0 chr10 42413651 42413962 -97902803 - AluJb SINE Alu -1 311 1 3219 211 73 24 chr10 42413962 42414361 -97902404 - L1MD2 LINE L1 -28 6331 5953 1224 256 84 20 chr10 42414361 42414755 -97902010 + LTR52 LTR ERVL 1 419 -2 3219 211 73 24 chr10 42414755 42415163 -97901602 - L1MD2 LINE L1 -406 5953 5479 670 262 71 8 chr10 42415199 42415466 -97901299 - L1M4 LINE L1 -4946 1438 1155 334 138 30 63 chr10 42415503 42415602 -97901163 - L1M4 LINE L1 -5406 878 783 367 283 71 27 chr10 42415640 42415824 -97900941 + L1MB4 LINE L1 15 206 -6336 1689 237 46 69 chr10 42415824 42416490 -97900275 + L1MB4 LINE L1 1764 2444 -4200 2000 148 0 10 chr10 42416490 42416793 -97899972 + AluSx SINE Alu 1 300 -12 1689 237 46 69 chr10 42416793 42416966 -97899799 + L1MB4 LINE L1 2444 2619 -4025 1540 151 50 29 chr10 42416966 42417245 -97899520 - AluJb SINE Alu -17 295 11 1689 237 46 69 chr10 42417245 42417600 -97899165 + L1MB4 LINE L1 2619 3043 -3601 1295 196 37 51 chr10 42417602 42417898 -97898867 + AluJo SINE Alu 1 292 -20 204 40 0 0 chr10 42417908 42417933 -97898832 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 3881 241 29 36 chr10 42417982 42419153 -97897612 + L1MB4 LINE L1 4241 5403 -1241 592 204 82 7 chr10 42419166 42419313 -97897452 + L1MB4 LINE L1 5896 6053 -127 549 223 94 58 chr10 42419319 42419543 -97897222 + L1MB4 LINE L1 5404 5635 -1009 2079 115 10 0 chr10 42419544 42419832 -97896933 + AluSx SINE Alu 1 291 -21 2265 202 103 9 chr10 42419855 42420410 -97896355 + L1MB4 LINE L1 6070 6676 -2 5984 233 60 65 chr10 42420426 42420493 -97896272 - L1MDa LINE L1 -1222 5318 5252 1523 197 43 48 chr10 42420493 42420869 -97895896 - MLT1A2 LTR MaLR 0 374 1 5984 233 60 65 chr10 42420869 42420988 -97895777 - L1MDa LINE L1 -1288 5252 5134 2985 174 66 2 chr10 42420988 42421505 -97895260 - MER44D DNA MER2_type 0 605 1 5984 233 60 65 chr10 42421505 42421597 -97895168 - L1MDa LINE L1 -1406 5134 5043 207 0 0 0 chr10 42421597 42421620 -97895145 + (TA)n Simple_repeat Simple_repeat 2 24 0 5984 233 60 65 chr10 42421620 42422025 -97894740 - L1MDa LINE L1 -1497 5043 4638 2196 114 23 0 chr10 42422025 42422331 -97894434 - AluSp SINE Alu 0 313 1 5984 233 60 65 chr10 42422331 42422966 -97893799 - L1MDa LINE L1 -1902 4638 4001 2065 126 0 0 chr10 42422966 42423244 -97893521 + AluSg SINE Alu 1 278 -32 368 20 0 20 chr10 42423244 42423294 -97893471 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 5984 233 60 65 chr10 42423294 42423561 -97893204 - L1MDa LINE L1 -2538 4002 3735 2185 120 0 3 chr10 42423561 42423862 -97892903 - AluSx SINE Alu -12 300 1 5984 233 60 65 chr10 42423862 42424575 -97892190 - L1MDa LINE L1 -2805 3735 3026 1971 167 3 0 chr10 42424575 42424874 -97891891 - AluSx SINE Alu -12 300 1 5984 233 60 65 chr10 42424874 42425242 -97891523 - L1MDa LINE L1 -3514 3026 2658 773 181 6 19 chr10 42425283 42425443 -97891322 + L1M1 LINE L1 19 176 -7389 4700 117 39 15 chr10 42425443 42426160 -97890605 + L1MA2 LINE L1 5571 6304 0 3094 219 139 12 chr10 42426163 42427156 -97889609 - L1MDa LINE L1 -3926 2614 1496 572 339 85 3 chr10 42427171 42427638 -97889127 + L2 LINE L2 2541 3055 -258 2185 118 23 0 chr10 42427752 42428057 -97888708 - AluSx SINE Alu 0 312 1 2270 94 0 7 chr10 42430244 42430543 -97886222 + AluSq SINE Alu 1 297 -16 1896 138 39 7 chr10 42430681 42430964 -97885801 + AluSq SINE Alu 1 292 -21 306 256 146 7 chr10 42430966 42431103 -97885662 + L1M4 LINE L1 4548 4703 -1443 400 259 128 30 chr10 42431167 42431472 -97885293 + L1M4 LINE L1 4807 5141 -1005 470 196 74 128 chr10 42431477 42431523 -97885242 - MER58B DNA MER1_type -2080 340 293 1907 140 27 0 chr10 42431523 42431815 -97884950 + AluSx SINE Alu 1 300 -12 470 196 74 128 chr10 42431815 42431916 -97884849 - MER58B DNA MER1_type -2127 293 201 2077 106 4 0 chr10 42432111 42432385 -97884380 + AluSg SINE Alu 24 298 -12 2363 93 0 0 chr10 42432407 42432708 -97884057 + AluSc SINE Alu 1 301 -8 21 0 0 0 chr10 42432773 42432794 -97883971 + AT_rich Low_complexity Low_complexity 1 21 0 1820 129 10 29 chr10 42433098 42433409 -97883356 + AluSx SINE Alu 1 305 -7 214 291 81 35 chr10 42434055 42434141 -97882624 + MIR3 SINE MIR 14 103 -105 1940 118 37 0 chr10 42434214 42434510 -97882255 - AluSp SINE Alu -6 307 1 1597 173 27 20 chr10 42436160 42436455 -97880310 + AluJo SINE Alu 1 297 -15 2261 115 0 0 chr10 42436584 42436889 -97879876 + AluSc SINE Alu 1 305 -4 1253 222 38 26 chr10 42436944 42437286 -97879479 - L1ME1 LINE L1 -15 6151 5806 1599 180 63 30 chr10 42437286 42437736 -97879029 - LTR10B LTR ERV1 0 547 1 291 304 20 0 chr10 42437736 42437838 -97878927 - L1ME1 LINE L1 -357 5809 5706 2285 181 99 31 chr10 42437928 42438413 -97878352 - MLT2B1 LTR ERVL 0 520 3 2074 105 43 23 chr10 42438431 42438735 -97878030 - AluSp SINE Alu -3 310 1 5879 173 20 18 chr10 42438824 42439991 -97876774 - L1MA5 LINE L1 0 6300 5137 1926 159 3 0 chr10 42439991 42440293 -97876472 - AluJb SINE Alu -9 303 1 1806 134 57 33 chr10 42440302 42440601 -97876164 - AluSc SINE Alu -3 306 1 5879 173 20 18 chr10 42440601 42440855 -97875910 - L1MA5 LINE L1 -1170 5130 4865 520 291 142 13 chr10 42440947 42441263 -97875502 - LTR50 LTR ERVL -3 792 436 576 162 77 8 chr10 42441407 42441524 -97875241 + L1MB7 LINE L1 6041 6165 -19 644 110 0 0 chr10 42441535 42441617 -97875148 - AluSc SINE Alu -17 292 211 488 216 117 95 chr10 42441743 42442135 -97874630 + LTR15 LTR ERV1 112 596 0 24046 264 39 54 chr10 42442135 42451001 -97865764 + HERV15 LTR ERV1 1 8732 -3 481 241 63 85 chr10 42451089 42451527 -97865238 + LTR15 LTR ERV1 112 493 0 1549 126 0 0 chr10 42451527 42451741 -97865024 - AluSc SINE Alu -95 214 1 1900 155 3 3 chr10 42451905 42452201 -97864564 + AluSq SINE Alu 1 296 -17 2291 106 3 0 chr10 42452206 42452499 -97864266 + AluSp SINE Alu 3 296 -17 269 294 0 0 chr10 42453284 42453352 -97863413 + (TG)n Simple_repeat Simple_repeat 2 69 0 189 0 0 0 chr10 42453352 42453373 -97863392 + (CA)n Simple_repeat Simple_repeat 2 22 0 506 240 50 88 chr10 42453374 42453675 -97863090 - MLT2B1 LTR ERVL -40 470 116 709 211 72 11 chr10 42453766 42453946 -97862819 - L1PB4 LINE L1 0 6156 5966 3481 232 39 10 chr10 42453948 42455225 -97861540 + L1MA6 LINE L1 4497 5839 -461 189 0 0 0 chr10 42455225 42455246 -97861519 + (CA)n Simple_repeat Simple_repeat 2 22 0 3481 232 39 10 chr10 42455246 42455722 -97861043 + L1MA6 LINE L1 5839 6300 0 2004 129 14 0 chr10 42455727 42456013 -97860752 + AluSx SINE Alu 1 290 -22 1501 259 35 7 chr10 42456024 42456483 -97860282 + L1MCa LINE L1 134 605 -5821 424 231 51 0 chr10 42456542 42456659 -97860106 + L1MCa LINE L1 573 695 -5731 199 0 65 0 chr10 42457165 42457196 -97859569 + (TA)n Simple_repeat Simple_repeat 2 34 0 26 0 0 0 chr10 42457774 42457800 -97858965 + AT_rich Low_complexity Low_complexity 1 26 0 1055 211 33 11 chr10 42458812 42459082 -97857683 - L1MA9 LINE L1 -217 6095 5820 264 224 0 0 chr10 42459099 42459166 -97857599 + (CATATA)n Simple_repeat Simple_repeat 6 72 0 207 0 0 0 chr10 42459174 42459197 -97857568 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1318 223 45 0 chr10 42459205 42459452 -97857313 - AluJo SINE Alu -54 258 1 2259 238 61 41 chr10 42459476 42460366 -97856399 - L1MA9 LINE L1 -556 5756 4885 312 83 0 0 chr10 42460366 42460414 -97856351 + (TA)n Simple_repeat Simple_repeat 2 49 0 2259 238 61 41 chr10 42460414 42460797 -97855968 - L1MA9 LINE L1 -1427 4885 4409 262 77 0 0 chr10 42460797 42460836 -97855929 + MADE1 DNA Mariner 1 39 -41 2259 238 61 41 chr10 42460836 42460995 -97855770 - L1MA9 LINE L1 -1903 4409 4255 42077 40 1 4 chr10 42461674 42467845 -97848920 + L1PA4 LINE L1 3 6152 -3 392 266 68 16 chr10 42467916 42468168 -97848597 + L1M4 LINE L1 4265 4529 -1617 * 701 160 0 30 chr10 42468167 42468298 -97848467 + L1MA2 LINE L1 6156 6282 -22 477 259 18 27 chr10 42468310 42468530 -97848235 + L1M4 LINE L1 4533 4750 -1396 1708 251 22 34 chr10 42468536 42469033 -97847732 + LTR42 LTR ERVL 2 492 -3 185 343 78 108 chr10 42469342 42469546 -97847219 - L2 LINE L2 -50 3222 3025 1523 201 67 31 chr10 42469886 42470105 -97846660 + MER6A DNA MER2_type 1 240 -625 330 26 0 0 chr10 42470105 42470144 -97846621 + (TG)n Simple_repeat Simple_repeat 2 40 0 1523 201 67 31 chr10 42470144 42470283 -97846482 + MER6A DNA MER2_type 240 372 -233 1812 146 7 32 chr10 42470616 42470925 -97845840 + AluSx SINE Alu 1 301 -11 2014 131 0 3 chr10 42471180 42471463 -97845302 - AluSx SINE Alu -30 282 1 945 152 104 24 chr10 42471482 42471693 -97845072 + MER6A DNA MER2_type 375 602 -3 1975 134 7 0 chr10 42472751 42473060 -97843705 + AluSx SINE Alu 1 311 0 481 152 0 0 chr10 42473357 42473449 -97843316 + L1PB1 LINE L1 6060 6151 0 1601 193 27 7 chr10 42473717 42474013 -97842752 + AluJb SINE Alu 1 302 -10 370 205 145 0 chr10 42474015 42474098 -97842667 + L1MB8 LINE L1 5498 5571 -613 625 185 0 0 chr10 42474134 42474242 -97842523 - FLAM_C SINE Alu -35 108 1 1800 221 48 50 chr10 42474242 42474803 -97841962 + L1MB8 LINE L1 5556 6115 -63 280 167 28 0 chr10 42474803 42474875 -97841890 + CT-rich Low_complexity Low_complexity 1 74 0 1299 236 7 7 chr10 42474875 42475155 -97841610 - AluJb SINE Alu -32 280 1 22 0 0 0 chr10 42475205 42475227 -97841538 + AT_rich Low_complexity Low_complexity 1 22 0 2166 122 0 10 chr10 42475228 42475532 -97841233 + AluSx SINE Alu 1 301 -11 1324 196 4 32 chr10 42475536 42475817 -97840948 + AluJo SINE Alu 1 273 -39 312 200 11 95 chr10 42476148 42476243 -97840522 - AluJo SINE Alu -130 172 86 887 219 0 57 chr10 42476243 42476471 -97840294 - AluJo SINE Alu -92 220 6 915 257 84 26 chr10 42476567 42476586 -97840179 + L2 LINE L2 2541 2557 -756 2244 113 0 3 chr10 42476586 42476897 -97839868 + AluSg SINE Alu 1 310 0 915 257 84 26 chr10 42476897 42477329 -97839436 + L2 LINE L2 2557 3095 -218 1157 208 62 22 chr10 42477335 42477609 -97839156 - AluJb SINE Alu -13 289 5 1398 183 25 61 chr10 42477623 42477984 -97838781 - MLT1D LTR MaLR -8 497 150 557 172 52 0 chr10 42477990 42478106 -97838659 + AluSq/x SINE Alu 12 133 -180 1417 215 56 7 chr10 42478133 42478421 -97838344 + AluJo SINE Alu 1 302 -10 225 247 11 101 chr10 42478421 42478510 -97838255 + MER21B LTR ERV1 16 96 -767 2643 210 38 53 chr10 42478517 42478933 -97837832 + MER21B LTR ERV1 19 440 -423 1716 182 17 17 chr10 42478933 42479229 -97837536 - AluJb SINE Alu -3 309 14 2643 210 38 53 chr10 42479229 42479312 -97837453 + MER21B LTR ERV1 440 523 -340 1724 157 28 11 chr10 42479312 42479599 -97837166 + AluJo SINE Alu 10 301 -11 2643 210 38 53 chr10 42479599 42479831 -97836934 + MER21B LTR ERV1 523 740 -123 2694 198 36 33 chr10 42480697 42481038 -97835727 + L1MB3 LINE L1 5480 5819 -364 712 213 0 0 chr10 42481038 42481165 -97835600 + FLAM_C SINE Alu 2 128 -5 2694 198 36 33 chr10 42481165 42481524 -97835241 + L1MB3 LINE L1 5819 6182 -1 2116 130 0 3 chr10 42482273 42482566 -97834199 + AluSc SINE Alu 1 292 -17 22 0 0 0 chr10 42482854 42482876 -97833889 + AT_rich Low_complexity Low_complexity 1 22 0 1051 203 88 2 chr10 42484047 42484440 -97832325 - LOR1a LTR ERV1 0 497 1 1580 189 31 10 chr10 42485113 42485404 -97831361 + AluSx SINE Alu 1 297 -15 220 314 8 16 chr10 42486581 42486705 -97830060 + GA-rich Low_complexity Low_complexity 1 123 0 204 40 0 0 chr10 42486789 42486814 -97829951 + (CAA)n Simple_repeat Simple_repeat 3 27 0 497 295 53 16 chr10 42487858 42488238 -97828527 - HSREP522 Satellite telomeric -104 400 7 1766 126 90 4 chr10 42488632 42488910 -97827855 + AluSg SINE Alu 1 302 -8 798 57 0 0 chr10 42489027 42489132 -97827633 - L1PA8 LINE L1 -304 5868 5764 2213 87 0 17 chr10 42489159 42489459 -97827306 + AluSg SINE Alu 1 295 -15 2345 97 0 0 chr10 42489652 42489950 -97826815 - AluY SINE Alu -13 298 1 1851 164 0 3 chr10 42490672 42490959 -97825806 + AluJo SINE Alu 1 286 -26 2108 107 3 27 chr10 42492912 42493234 -97823531 - AluSq SINE Alu 0 313 2 25 31 0 0 chr10 42493620 42493652 -97823113 + AT_rich Low_complexity Low_complexity 1 32 0 359 352 57 0 chr10 42493770 42493929 -97822836 - MIR SINE MIR -70 192 25 221 148 0 37 chr10 42494505 42494559 -97822206 + (TTCTCC)n Simple_repeat Simple_repeat 3 54 0 703 139 28 39 chr10 42494561 42494741 -97822024 + CT-rich Low_complexity Low_complexity 3 180 0 452 292 46 31 chr10 42495035 42495230 -97821535 + HAL1 LINE L1 780 977 -1530 26 64 0 0 chr10 42495237 42495284 -97821481 + AT_rich Low_complexity Low_complexity 1 47 0 1187 294 81 18 chr10 42495292 42496011 -97820754 + HAL1 LINE L1 1619 2382 -125 23 33 0 0 chr10 42496264 42496294 -97820471 + AT_rich Low_complexity Low_complexity 1 30 0 1488 270 108 31 chr10 42496807 42497522 -97819243 - L2 LINE L2 0 3313 2518 2725 50 6 0 chr10 42497522 42497863 -97818902 - L1PA4 LINE L1 -3 6152 5810 1488 270 108 31 chr10 42497863 42498028 -97818737 - L2 LINE L2 -795 2518 2367 2244 112 0 0 chr10 42499115 42499409 -97817356 + AluSg SINE Alu 1 294 -16 357 143 0 0 chr10 42499421 42499477 -97817288 + AluJ/FLAM SINE Alu 2 57 -245 406 239 156 44 chr10 42499674 42499854 -97816911 + L2 LINE L2 3114 3313 0 233 56 0 28 chr10 42500865 42500901 -97815864 + (GAAA)n Simple_repeat Simple_repeat 3 37 0 1635 164 49 24 chr10 42501758 42502087 -97814678 - MER44D DNA MER2_type -2 607 1 21 0 0 0 chr10 42502190 42502211 -97814554 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 42502270 42502292 -97814473 + AT_rich Low_complexity Low_complexity 1 22 0 2824 173 9 7 chr10 42502386 42502931 -97813834 - L1P LINE L1 -1101 5045 4500 1102 115 6 0 chr10 42502933 42503098 -97813667 + L1PA13 LINE L1 5993 6158 -5 196 331 92 8 chr10 42505323 42505453 -97811312 + L2 LINE L2 701 841 -2473 1919 169 0 0 chr10 42505939 42506234 -97810531 + AluSx SINE Alu 1 295 -17 476 135 42 52 chr10 42506516 42506612 -97810153 - L1P LINE L1 -1552 4594 4500 1014 165 264 16 chr10 42507302 42507544 -97809221 - AluJo SINE Alu 0 302 1 1637 156 12 0 chr10 42507770 42508020 -97808745 - AluSx SINE Alu -16 296 44 1783 174 34 0 chr10 42509077 42509370 -97807395 - AluJb SINE Alu -9 303 1 817 214 35 0 chr10 42512656 42512829 -97803936 + MER5A DNA MER1_type 11 189 0 768 233 14 42 chr10 42512837 42513052 -97803713 + MER3 DNA MER1_type 1 209 0 348 207 126 45 chr10 42514036 42514147 -97802618 - MIR3 SINE MIR -6 202 83 2109 128 0 26 chr10 42515288 42515593 -97801172 - AluSq SINE Alu -16 297 1 279 140 0 0 chr10 42516663 42516713 -97800052 + (TG)n Simple_repeat Simple_repeat 1 50 0 230 296 18 45 chr10 42518004 42518170 -97798595 - MIR SINE MIR -61 147 31 2100 146 123 5 chr10 42518187 42518570 -97798195 + MSTA LTR MaLR 1 428 0 2325 92 0 20 chr10 42518761 42519065 -97797700 - AluSc SINE Alu -11 298 1 228 198 66 55 chr10 42519278 42519369 -97797396 - L2 LINE L2 -99 3214 3123 1700 181 3 17 chr10 42519399 42519692 -97797073 + AluSx SINE Alu 3 291 -21 26 30 0 0 chr10 42520325 42520358 -97796407 + AT_rich Low_complexity Low_complexity 1 33 0 985 290 130 33 chr10 42521630 42522521 -97794244 - L2 LINE L2 -12 3301 2334 1116 150 0 0 chr10 42522552 42522719 -97794046 - L1PB3 LINE L1 -24 6130 5964 302 261 9 0 chr10 42522760 42522871 -97793894 + (TA)n Simple_repeat Simple_repeat 1 112 0 3785 23 9 0 chr10 42523102 42523533 -97793232 - L1P LINE L1 -1709 4437 4002 2098 45 0 19 chr10 42523533 42523790 -97792975 + L1PA5 LINE L1 5895 6153 -1 196 162 0 27 chr10 42523800 42523837 -97792928 - MIR SINE MIR -218 44 9 589 125 86 78 chr10 42524952 42525080 -97791685 - FLAM_C SINE Alu -1 132 4 224 250 0 0 chr10 42525242 42525290 -97791475 + MIR3 SINE MIR 112 159 -49 2321 115 3 0 chr10 42525815 42526127 -97790638 - AluSp SINE Alu 0 313 1 1809 145 0 28 chr10 42526822 42527133 -97789632 - AluJb SINE Alu 0 303 1 486 277 53 19 chr10 42527689 42527888 -97788877 - MIR SINE MIR -52 210 8 1560 48 0 0 chr10 42529206 42529393 -97787372 + L1PA6 LINE L1 5968 6154 0 201 94 0 0 chr10 42529422 42529454 -97787311 + (CA)n Simple_repeat Simple_repeat 2 33 0 2130 105 7 0 chr10 42529785 42530080 -97786685 + AluSg SINE Alu 1 297 -13 2241 92 3 7 chr10 42530145 42530438 -97786327 + AluSc SINE Alu 1 292 -17 850 167 13 0 chr10 42530451 42530601 -97786164 - L1MB2 LINE L1 -58 6113 5962 25 53 0 18 chr10 42530883 42530902 -97785863 + AT_rich Low_complexity Low_complexity 1 19 -37 1902 145 36 46 chr10 42530902 42531295 -97785470 + L1MA8 LINE L1 5897 6285 -6 25 53 0 18 chr10 42531295 42531332 -97785433 + AT_rich Low_complexity Low_complexity 19 56 0 1851 178 0 3 chr10 42531336 42531639 -97785126 + AluJb SINE Alu 5 306 -6 29 0 0 0 chr10 42532256 42532285 -97784480 + AT_rich Low_complexity Low_complexity 1 29 0 1352 159 52 17 chr10 42532737 42532970 -97783795 + AluJo SINE Alu 57 297 -15 201 235 0 0 chr10 42535088 42535139 -97781626 + L2 LINE L2 3190 3240 -73 1958 146 3 10 chr10 42535579 42535881 -97780884 + AluJb SINE Alu 1 300 -12 228 327 9 18 chr10 42535894 42536004 -97780761 + MER5B DNA MER1_type 1 109 -69 323 326 90 21 chr10 42536602 42536835 -97779930 - MIR SINE MIR 0 262 14 541 265 175 26 chr10 42537733 42538208 -97778557 - L2 LINE L2 0 3313 2755 5032 39 11 15 chr10 42538256 42539295 -97777470 - MER11A LTR ERVK 0 1266 1 242 283 26 44 chr10 42539860 42539973 -97776792 + MLT2E LTR ERVL 505 615 -13 657 257 34 10 chr10 42539982 42540188 -97776577 - L1MC5 LINE L1 -735 7226 7016 2277 114 0 3 chr10 42540284 42540583 -97776182 - AluY SINE Alu -13 298 1 260 229 136 7 chr10 42540640 42540780 -97775985 - L1ME LINE L1 -5160 910 753 2841 221 33 2 chr10 42540781 42541352 -97775413 + Tigger7 DNA MER2_type 2 590 -143 390 225 12 0 chr10 42541346 42541426 -97775339 + Tigger7 DNA MER2_type 2407 2487 0 * 285 29 0 0 chr10 42541543 42541577 -97775188 + (CAT)n Simple_repeat Simple_repeat 3 36 0 1480 210 3 32 chr10 42541577 42541887 -97774878 - AluJo SINE Alu -11 301 1 871 279 34 20 chr10 42541894 42542188 -97774577 - L1MC4 LINE L1 -1029 7013 6716 29 0 0 0 chr10 42542208 42542237 -97774528 + AT_rich Low_complexity Low_complexity 1 29 0 2160 111 0 0 chr10 42542354 42542634 -97774131 - AluSg1 SINE Alu -29 280 1 1479 148 6 102 chr10 42542634 42542966 -97773799 - AluSx SINE Alu -12 300 1 696 164 9 0 chr10 42542966 42543082 -97773683 + Tigger1 DNA MER2_type 2302 2418 0 1293 215 0 31 chr10 42543148 42543318 -97773447 - AluJo SINE Alu -6 306 132 261 0 0 0 chr10 42543318 42543347 -97773418 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2393 57 0 0 chr10 42543347 42543629 -97773136 - AluY SINE Alu -29 282 1 1293 215 0 31 chr10 42543629 42543745 -97773020 - AluJo SINE Alu -178 134 28 1060 246 18 33 chr10 42543750 42544080 -97772685 - L1MC4 LINE L1 -476 7566 7242 446 76 0 0 chr10 42544094 42544160 -97772605 - MER41A LTR ERV1 -88 466 401 970 154 0 0 chr10 42544340 42544483 -97772282 - FLAM_C SINE Alu 0 143 1 355 43 0 0 chr10 42545029 42545076 -97771689 + AluY SINE Alu 254 300 0 2056 112 0 24 chr10 42545086 42545373 -97771392 + AluSg1 SINE Alu 1 280 -29 31 26 0 0 chr10 42545490 42545528 -97771237 + AT_rich Low_complexity Low_complexity 1 38 0 280 313 9 0 chr10 42545811 42545926 -97770839 - L1ME2 LINE L1 0 6164 6049 292 267 100 0 chr10 42546763 42546853 -97769912 + MIR3 SINE MIR 91 189 -19 2326 95 3 0 chr10 42547136 42547431 -97769334 - AluSq SINE Alu -16 297 2 2331 97 0 3 chr10 42549261 42549572 -97767193 - AluSq SINE Alu -3 310 1 1224 119 108 101 chr10 42549809 42550095 -97766670 - AluJo SINE Alu -24 288 1 225 282 0 0 chr10 42553212 42553290 -97763475 + (CA)n Simple_repeat Simple_repeat 2 79 0 603 239 0 8 chr10 42554152 42554286 -97762479 - AluJo SINE Alu -178 134 2 761 229 23 6 chr10 42556085 42556260 -97760505 - MER45A DNA AcHobo 0 178 1 2014 154 41 11 chr10 42556319 42556683 -97760082 + THE1C LTR MaLR 1 375 0 1270 91 11 6 chr10 42556778 42556953 -97759812 - PABL_B LTR ERV1 -206 461 286 342 286 38 30 chr10 42558435 42558568 -97758197 - MIR SINE MIR -55 153 20 417 213 23 89 chr10 42558619 42558888 -97757877 - L1M3 LINE L1 -690 5493 689 * 6614 139 23 1 chr10 42558886 42560130 -97756635 - L1MA3 LINE L1 0 6305 5033 2707 179 77 9 chr10 42560130 42561005 -97755760 + L1 LINE L1 3417 4108 -2038 1507 118 0 48 chr10 42560773 42561001 -97755764 - AluY SINE Alu -94 217 1 845 113 8 0 chr10 42561001 42561123 -97755642 - MSTA-int LTR MaLR -1525 126 1 2242 116 129 11 chr10 42561123 42561502 -97755263 - MSTA LTR MaLR 0 428 5 3215 243 49 22 chr10 42561506 42562226 -97754539 + L1MC2 LINE L1 4301 5000 -1146 2132 43 0 22 chr10 42562226 42562503 -97754262 + L1PA6 LINE L1 5883 6153 -1 3215 243 49 22 chr10 42562503 42562571 -97754194 + L1MC2 LINE L1 5000 5065 -1081 1753 177 3 3 chr10 42562571 42562865 -97753900 + AluSx SINE Alu 1 294 -18 3215 243 49 22 chr10 42562865 42563081 -97753684 + L1MC2 LINE L1 5065 5333 -813 2201 104 37 0 chr10 42563081 42563406 -97753359 + AluSg SINE Alu 1 336 0 922 8 23 16 chr10 42563406 42563535 -97753230 + (GAGAA)n Simple_repeat Simple_repeat 4 133 0 554 169 127 8 chr10 42563535 42563653 -97753112 + AluJb SINE Alu 170 301 -11 2258 194 47 6 chr10 42563653 42564162 -97752603 + L1MC2 LINE L1 5814 6343 -1 2080 189 116 34 chr10 42564164 42564761 -97752004 + L1MDa LINE L1 1353 1998 -4542 1852 156 6 16 chr10 42564764 42565078 -97751687 + AluJo SINE Alu 1 311 -1 2328 73 0 3 chr10 42565440 42565729 -97751036 - AluSc SINE Alu 0 309 22 2850 81 128 0 chr10 42565941 42566372 -97750393 + LTR19A LTR ERV1 1 486 0 2328 191 10 17 chr10 42567613 42567968 -97748797 - MER70B LTR ERVL -177 401 48 2140 121 3 7 chr10 42567968 42568273 -97748492 + AluSx SINE Alu 1 304 -8 2328 191 10 17 chr10 42568273 42568321 -97748444 - MER70B LTR ERVL -530 48 1 7622 198 106 22 chr10 42568512 42570131 -97746634 + MER52A LTR ERV1 1 1755 0 635 220 58 0 chr10 42570135 42570308 -97746457 + MER5A DNA MER1_type 4 186 -3 246 65 0 0 chr10 42570322 42570353 -97746412 + MER70B LTR ERVL 290 320 -258 2362 120 11 22 chr10 42570985 42571352 -97745413 + THE1B LTR MaLR 1 363 -1 981 274 136 7 chr10 42572169 42572632 -97744133 + L2 LINE L2 1311 1833 -1481 454 272 40 17 chr10 42572653 42572826 -97743939 + L2 LINE L2 2046 2222 -1092 2565 124 70 5 chr10 42572833 42573235 -97743530 + MSTA LTR MaLR 1 428 0 1233 232 288 17 chr10 42573235 42573833 -97742932 + LTR41 LTR ERVL 8 767 -6 1493 249 44 24 chr10 42573837 42574006 -97742759 + L2 LINE L2 2210 2374 -940 2738 14 0 0 chr10 42574006 42574302 -97742463 - AluYa5 SINE Alu -15 296 1 1493 249 44 24 chr10 42574302 42574627 -97742138 + L2 LINE L2 2374 2714 -600 1411 243 119 25 chr10 42574786 42575350 -97741415 - L2 LINE L2 -2089 1225 609 1600 129 10 61 chr10 42575832 42576143 -97740622 - AluJo SINE Alu -17 295 1 227 341 33 0 chr10 42577019 42577110 -97739655 - MIR SINE MIR -92 116 23 247 222 42 14 chr10 42577277 42577349 -97739416 + L2 LINE L2 3240 3313 0 557 241 145 0 chr10 42577757 42577923 -97738842 - MER3 DNA MER1_type 0 209 20 477 284 151 14 chr10 42578750 42578968 -97737797 - MIR SINE MIR -13 249 2 1617 147 42 62 chr10 42580244 42580550 -97736215 - AluJb SINE Alu -12 300 1 235 264 47 31 chr10 42581415 42581544 -97735221 - MIR SINE MIR -36 226 96 1725 134 67 10 chr10 42582178 42582492 -97734273 - L1MA4 LINE L1 -1 6299 5968 426 252 124 52 chr10 42582653 42582849 -97733916 - L1MC4a LINE L1 -161 5960 5750 1083 197 45 0 chr10 42583891 42584089 -97732676 - MER58A DNA MER1_type -16 208 2 1764 165 14 3 chr10 42584394 42584685 -97732080 + AluSx SINE Alu 1 294 -18 24 32 0 0 chr10 42585404 42585435 -97731330 + AT_rich Low_complexity Low_complexity 1 31 0 1989 146 10 7 chr10 42587739 42588047 -97728718 - AluSx SINE Alu -3 309 1 1234 246 78 8 chr10 42588162 42588557 -97728208 - L1MC4 LINE L1 -799 7243 6821 1686 173 17 13 chr10 42591528 42591828 -97724937 - AluJb SINE Alu -6 306 6 335 230 103 52 chr10 42592289 42592463 -97724302 - L1MC5 LINE L1 -436 7525 7343 723 178 86 0 chr10 42592473 42592636 -97724129 + MER3 DNA MER1_type 10 186 -23 1031 242 145 70 chr10 42592653 42592952 -97723813 - L1MC5 LINE L1 -624 7337 7062 2207 110 0 3 chr10 42592952 42593253 -97723512 - AluY SINE Alu -11 300 1 1031 242 145 70 chr10 42593253 42593794 -97722971 - L1MC5 LINE L1 -899 7062 6414 1387 163 150 5 chr10 42593849 42594182 -97722583 - L1MC4a LINE L1 -606 5578 5215 21 71 0 0 chr10 42594918 42594960 -97721805 + AT_rich Low_complexity Low_complexity 1 42 0 75 39 0 0 chr10 42595146 42595249 -97721516 + AT_rich Low_complexity Low_complexity 1 103 0 661 224 116 0 chr10 42595447 42595594 -97721171 - FRAM SINE Alu -2 164 1 1326 191 5 5 chr10 42595644 42595864 -97720901 - AluJo SINE Alu -92 220 1 24 0 0 0 chr10 42595884 42595908 -97720857 + AT_rich Low_complexity Low_complexity 1 24 0 3257 219 72 27 chr10 42596177 42597156 -97719609 - L1ME1 LINE L1 -5 6421 5335 2127 101 28 0 chr10 42597156 42597443 -97719322 - AluSx SINE Alu -17 295 1 3257 219 72 27 chr10 42597443 42598111 -97718654 - L1ME1 LINE L1 -1091 5335 4699 1630 137 0 0 chr10 42598340 42598566 -97718199 - AluSx SINE Alu -25 287 62 442 203 73 8 chr10 42598823 42598946 -97717819 - L1ME1 LINE L1 -1948 4458 4328 2404 95 0 3 chr10 42598982 42599288 -97717477 + AluSg SINE Alu 1 305 -5 2341 177 68 74 chr10 42599327 42599564 -97717201 - L1MD2 LINE L1 0 6359 6122 191 88 29 0 chr10 42599564 42599598 -97717167 + (TG)n Simple_repeat Simple_repeat 2 36 0 2341 177 68 74 chr10 42599598 42599994 -97716771 - L1MD2 LINE L1 -237 6122 5730 1142 176 49 5 chr10 42599994 42600169 -97716596 - AluJo SINE Alu 0 305 117 189 74 0 0 chr10 42600169 42600196 -97716569 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1142 176 49 5 chr10 42600196 42600249 -97716516 - AluJo SINE Alu -188 117 68 1125 190 74 16 chr10 42600249 42600491 -97716274 - L1MD2 LINE L1 -622 5737 5482 1545 166 7 58 chr10 42600632 42600940 -97715825 - AluJo SINE Alu -20 292 1 370 111 0 0 chr10 42600948 42601002 -97715763 - L1ME1 LINE L1 -2303 4103 4050 550 173 19 19 chr10 42601062 42601166 -97715599 - U13 snRNA snRNA 0 104 1 2771 223 65 69 chr10 42601192 42601868 -97714897 - L1ME1 LINE L1 -2367 4039 3362 2134 123 3 3 chr10 42601868 42602178 -97714587 - AluSp SINE Alu -3 310 1 2771 223 65 69 chr10 42602178 42602351 -97714414 - L1ME1 LINE L1 -3044 3362 3190 2888 10 0 0 chr10 42602351 42602659 -97714106 - AluYa5 SINE Alu -3 308 1 2771 223 65 69 chr10 42602659 42603007 -97713758 - L1ME1 LINE L1 -3216 3190 2844 1457 209 22 0 chr10 42603007 42603275 -97713490 - AluJo SINE Alu -38 274 1 2771 223 65 69 chr10 42603275 42603317 -97713448 - L1ME1 LINE L1 -3562 2844 2803 1240 241 57 67 chr10 42603370 42603864 -97712901 - LTR53 LTR ERVL -11 508 20 2345 215 150 77 chr10 42603877 42605410 -97711355 - L1ME1 LINE L1 -3753 2653 1017 1286 175 24 12 chr10 42605411 42605662 -97711103 - L1ME1 LINE L1 -5502 907 654 873 241 66 8 chr10 42605674 42605915 -97710850 - L1ME1 LINE L1 -6072 337 83 281 252 107 29 chr10 42606056 42606159 -97710606 + MIR SINE MIR 145 255 -7 684 189 148 18 chr10 42606395 42606564 -97710201 - AluJb SINE Alu -8 304 114 2200 102 3 0 chr10 42606857 42607160 -97709605 + AluSg SINE Alu 1 304 -6 360 218 58 11 chr10 42609155 42609242 -97707523 - L2 LINE L2 -499 2815 2725 474 324 95 108 chr10 42609262 42610299 -97706466 - L2 LINE L2 -709 2605 1519 717 230 29 0 chr10 42610315 42610489 -97706276 + MER3 DNA MER1_type 5 183 -26 265 308 60 15 chr10 42610566 42610699 -97706066 - L2 LINE L2 -1898 1416 1278 2245 105 0 0 chr10 42610822 42611128 -97705637 - AluSx SINE Alu -6 306 1 245 338 0 12 chr10 42612257 42612337 -97704428 - L2 LINE L2 0 3313 3235 2260 114 0 0 chr10 42612578 42612886 -97703879 - AluSx SINE Alu -4 308 1 445 172 75 0 chr10 42613832 42613925 -97702840 - L1M2a LINE L1 -7068 100 1 764 252 190 26 chr10 42614048 42614437 -97702328 - L1ME3A LINE L1 -1 6169 5717 272 261 2 25 chr10 42614606 42614686 -97702079 - L1ME3A LINE L1 -615 5549 5469 354 310 65 7 chr10 42614717 42614872 -97701893 - L1MEd LINE L1 -5953 166 3 1486 64 5 0 chr10 42615194 42615382 -97701383 + AluY SINE Alu 106 294 -17 1940 113 3 27 chr10 42615590 42615907 -97700858 + AluSx SINE Alu 1 310 0 298 132 57 0 chr10 42617640 42617693 -97699072 - Tigger3(Golem) DNA MER2_type -71 2958 2903 435 236 81 95 chr10 42618038 42618186 -97698579 - L1MD2 LINE L1 -79 6280 6135 1975 126 3 7 chr10 42618201 42618495 -97698270 + AluJb SINE Alu 1 293 -19 457 237 31 0 chr10 42618509 42618606 -97698159 - U6 snRNA snRNA -4 103 4 1834 173 77 0 chr10 42619420 42619743 -97697022 - MER7A DNA MER2_type 0 346 1 273 172 0 86 chr10 42619897 42619955 -97696810 + L2 LINE L2 3187 3239 -74 3451 177 113 35 chr10 42620945 42621867 -97694898 - L1MB3 LINE L1 0 6183 5196 25 31 0 0 chr10 42621885 42621917 -97694848 + GC_rich Low_complexity Low_complexity 1 32 0 717 213 43 7 chr10 42622077 42622218 -97694547 + AluSg/x SINE Alu 134 279 -33 772 145 0 0 chr10 42622278 42622402 -97694363 + Tigger2 DNA MER2_type 873 996 -1722 1410 199 49 66 chr10 42622410 42622437 -97694328 - MER49 LTR ERV1 -10 913 887 1502 158 8 15 chr10 42622437 42622696 -97694069 - AluJb SINE Alu -55 257 1 1410 199 49 66 chr10 42622696 42622707 -97694058 - MER49 LTR ERV1 -36 887 877 856 35 26 0 chr10 42622707 42622822 -97693943 + (TTTC)n Simple_repeat Simple_repeat 3 120 0 1809 132 0 18 chr10 42622826 42623106 -97693659 - AluSx SINE Alu -32 280 6 1410 199 49 66 chr10 42623106 42623468 -97693297 - MER49 LTR ERV1 -49 874 514 * 5084 122 82 18 chr10 42623443 42624233 -97692532 + Tigger2 DNA MER2_type 1814 2664 -54 1882 130 0 13 chr10 42624233 42624532 -97692233 - AluSg SINE Alu -15 295 1 5084 122 82 18 chr10 42624532 42624591 -97692174 + Tigger2 DNA MER2_type 2664 2718 0 374 272 125 15 chr10 42624595 42624731 -97692034 - MIR SINE MIR -70 192 42 671 151 118 0 chr10 42624991 42625110 -97691655 + FLAM_C SINE Alu 1 133 0 241 284 136 58 chr10 42625372 42625843 -97690922 + L2 LINE L2 2554 3064 -208 515 141 148 16 chr10 42625846 42625974 -97690791 + MER3 DNA MER1_type 41 185 -24 919 188 56 39 chr10 42625981 42626106 -97690659 + MER3 DNA MER1_type 2268 2401 -223 2059 101 0 7 chr10 42626106 42626418 -97690347 + AluSq SINE Alu 1 310 0 919 188 56 39 chr10 42626418 42626525 -97690240 + MER3 DNA MER1_type 2401 2505 -119 308 65 0 43 chr10 42626523 42626569 -97690196 - AluSx SINE Alu -10 292 249 * 883 235 67 17 chr10 42626679 42627398 -97689367 - L1MD1 LINE L1 -329 5913 5032 12708 164 53 19 chr10 42627423 42629445 -97687320 - ERVL-B1 LTR ERVL -357 5407 3293 9122 38 7 179 chr10 42629445 42631129 -97685636 + SVA Other Other 1 1386 0 12708 164 53 19 chr10 42631129 42631435 -97685330 - ERVL-B1 LTR ERVL -2471 3293 2999 1890 244 81 6 chr10 42631418 42631914 -97684851 - ERVL-B1 LTR ERVL -5230 534 2 * 1961 195 95 41 chr10 42631915 42632408 -97684357 - MLT2B1 LTR ERVL 0 520 1 2773 142 60 22 chr10 42632413 42632455 -97684310 + L1MA5 LINE L1 5729 5768 -532 198 0 0 0 chr10 42632455 42632477 -97684288 + (TG)n Simple_repeat Simple_repeat 2 23 0 2773 142 60 22 chr10 42632477 42632985 -97683780 + L1MA5 LINE L1 5768 6300 0 180 0 0 0 chr10 42633522 42633542 -97683223 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 8538 259 66 29 chr10 42633712 42634515 -97682250 - L1MD2 LINE L1 0 6753 5981 1725 143 8 0 chr10 42634515 42634781 -97681984 - AluSx SINE Alu -44 268 1 8538 259 66 29 chr10 42634781 42637237 -97679528 - L1MD2 LINE L1 -772 5981 3317 1666 160 28 14 chr10 42637237 42637525 -97679240 - AluJb SINE Alu -20 292 1 8538 259 66 29 chr10 42637525 42638302 -97678463 - L1MD2 LINE L1 -3436 3317 2570 956 275 133 42 chr10 42638377 42638882 -97677883 - MER77 LTR ERV1 -1 604 54 3221 241 95 18 chr10 42638913 42640147 -97676618 - L1MD2 LINE L1 -4012 2528 1107 1637 193 3 0 chr10 42640147 42640458 -97676307 - AluJo SINE Alu 0 312 1 3221 241 95 18 chr10 42640458 42640731 -97676034 - L1MD2 LINE L1 -5433 1107 857 804 268 61 23 chr10 42640905 42641166 -97675599 - L1MD2 LINE L1 -6208 332 62 228 278 56 32 chr10 42641197 42641323 -97675442 - L1P4 LINE L1 -558 5605 5477 366 340 92 54 chr10 42642313 42642607 -97674158 + HAL1 LINE L1 1251 1555 -952 965 90 8 0 chr10 42642957 42643091 -97673674 + AluSq/x SINE Alu 1 135 -178 1988 115 0 3 chr10 42643091 42643386 -97673379 + AluSx SINE Alu 1 294 -18 315 350 49 28 chr10 42643779 42643843 -97672922 + MIR SINE MIR 4 65 -197 1721 187 36 3 chr10 42643843 42644175 -97672590 - MER2 DNA MER2_type -1 343 1 315 350 49 28 chr10 42644175 42644253 -97672512 + MIR SINE MIR 65 149 -113 502 286 70 50 chr10 42644306 42644884 -97671881 - L1ME LINE L1 -503 5661 5074 1820 80 52 12 chr10 42645116 42645367 -97671398 + L1PA8 LINE L1 5906 6166 -6 22 0 0 0 chr10 42645367 42645389 -97671376 + AT_rich Low_complexity Low_complexity 1 22 0 349 340 95 53 chr10 42645815 42646194 -97670571 - L1ME LINE L1 -2683 3463 3069 246 331 8 0 chr10 42646214 42646335 -97670430 - L1ME LINE L1 -3135 3011 2890 225 333 18 0 chr10 42646379 42646490 -97670275 - L1ME LINE L1 -3128 3018 2906 1866 155 0 3 chr10 42646516 42646813 -97669952 - AluSx SINE Alu -16 296 1 189 0 26 77 chr10 42647037 42647076 -97669689 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 888 209 6 0 chr10 42647674 42647846 -97668919 + L1MB3 LINE L1 5659 5831 -352 885 96 16 0 chr10 42647846 42647971 -97668794 - BC200 scRNA scRNA -60 140 14 1433 193 55 40 chr10 42647974 42648353 -97668412 + L1MB3 LINE L1 5798 6182 -1 289 254 123 9 chr10 42648359 42648473 -97668292 + MIR SINE MIR 20 146 -116 230 0 0 32 chr10 42649728 42649759 -97667006 + (TTTTTG)n Simple_repeat Simple_repeat 3 32 0 1111 237 78 3 chr10 42649801 42650134 -97666631 - MER47A DNA MER2_type 0 366 9 215 261 159 0 chr10 42650155 42650224 -97666541 + MIR SINE MIR 64 143 -119 213 341 0 0 chr10 42650266 42650348 -97666417 + (TATG)n Simple_repeat Simple_repeat 3 84 0 218 190 0 17 chr10 42650352 42650410 -97666355 + (TG)n Simple_repeat Simple_repeat 2 58 0 2152 83 3 42 chr10 42651626 42651939 -97664826 - AluSg SINE Alu -9 301 1 426 306 0 0 chr10 42652239 42652409 -97664356 + (CA)n Simple_repeat Simple_repeat 1 170 0 276 185 0 0 chr10 42652430 42652484 -97664281 + (CA)n Simple_repeat Simple_repeat 1 54 0 182 318 0 0 chr10 42652663 42652726 -97664039 - L2 LINE L2 -6 3266 3204 365 237 140 9 chr10 42653473 42653587 -97663178 - MIR SINE MIR -74 188 60 207 100 0 0 chr10 42658950 42658980 -97657785 + (TG)n Simple_repeat Simple_repeat 2 31 0 1008 237 55 29 chr10 42659593 42660044 -97656721 + MLT2B1 LTR ERVL 1 513 -7 219 326 0 0 chr10 42663028 42663114 -97653651 + (TG)n Simple_repeat Simple_repeat 1 86 0 416 304 75 68 chr10 42663812 42664226 -97652539 + L1MEd LINE L1 853 1252 -4867 1863 127 31 130 chr10 42664481 42664973 -97651792 - Tigger2 DNA MER2_type 0 2718 1 2912 184 26 36 chr10 42665346 42665955 -97650810 - LTR26 LTR ERV1 0 603 1 216 0 0 0 chr10 42666011 42666035 -97650730 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 604 300 104 39 chr10 42666329 42666767 -97649998 + L1MEd LINE L1 2627 3089 -3040 744 114 24 0 chr10 42667833 42667956 -97648809 + L1MA7 LINE L1 6166 6291 0 541 323 81 19 chr10 42668835 42669157 -97647608 - L1MDa LINE L1 -2634 3906 3565 6702 94 12 13 chr10 42669160 42669254 -97647511 - L1MA2 LINE L1 0 6304 6211 2101 114 0 3 chr10 42669254 42669551 -97647214 + AluSg SINE Alu 1 296 -14 6702 94 12 13 chr10 42669551 42670431 -97646334 - L1MA2 LINE L1 -93 6211 5331 * 10955 163 14 8 chr10 42670428 42672163 -97644602 - L1M1 LINE L1 -5807 1758 14 359 227 103 67 chr10 42672169 42672363 -97644402 - L1MDa LINE L1 -2998 3542 3342 1480 285 42 10 chr10 42672389 42672908 -97643857 - L1ME3A LINE L1 -260 5910 5375 2517 111 40 24 chr10 42672919 42673296 -97643469 + MSTC LTR MaLR 1 383 -45 926 191 26 0 chr10 42673314 42673508 -97643257 - L1MDa LINE L1 -3530 3010 2812 * 1991 216 118 14 chr10 42673505 42673792 -97642973 - L1MDa LINE L1 -4000 2540 2284 1948 118 51 3 chr10 42673792 42674088 -97642677 - AluSx SINE Alu -2 310 1 1991 216 118 14 chr10 42674088 42674453 -97642312 - L1MDa LINE L1 -4256 2284 1820 2270 20 0 0 chr10 42674537 42674791 -97641974 + L1PA3 LINE L1 5897 6150 -5 186 167 0 0 chr10 42674795 42674831 -97641934 + A-rich Low_complexity Low_complexity 1 36 0 384 198 144 18 chr10 42674831 42674942 -97641823 - L1MDa LINE L1 -4736 1804 1680 317 175 0 0 chr10 42674948 42675005 -97641760 + MLT2B1 LTR ERVL 464 520 0 1484 262 171 8 chr10 42675011 42675618 -97641147 + L1MC4a LINE L1 6784 7489 -319 391 240 116 0 chr10 42675620 42675749 -97641016 + L1MC4 LINE L1 7759 7902 -140 825 256 59 21 chr10 42675961 42676199 -97640566 + MIR SINE MIR 15 261 -1 2664 79 35 0 chr10 42676545 42676888 -97639877 + THE1A LTR MaLR 1 355 0 291 156 0 0 chr10 42677341 42677386 -97639379 - MLT1H LTR MaLR -1 548 504 467 276 241 25 chr10 42677437 42677752 -97639013 - MLT1H LTR MaLR -42 507 125 338 344 32 26 chr10 42678071 42678414 -97638351 + L1ME3A LINE L1 4942 5286 -860 744 259 41 5 chr10 42678415 42678612 -97638153 + MER63A DNA MER1_type 1 204 -6 1165 289 51 48 chr10 42678613 42678646 -97638119 + L1ME3A LINE L1 5285 5316 -854 2003 110 21 0 chr10 42678646 42678936 -97637829 + AluSp SINE Alu 1 296 -17 1165 289 51 48 chr10 42678936 42678981 -97637784 + L1ME3A LINE L1 5316 5359 -811 2300 128 82 15 chr10 42678981 42679386 -97637379 - MSTB1 LTR MaLR 0 432 1 1165 289 51 48 chr10 42679386 42679953 -97636812 + L1ME3A LINE L1 5359 5933 -237 369 0 0 0 chr10 42680581 42680622 -97636143 + (CA)n Simple_repeat Simple_repeat 2 42 0 1144 155 14 10 chr10 42682387 42682594 -97634171 - AluJb SINE Alu -20 292 85 8271 49 9 118 chr10 42682620 42683942 -97632823 + SVA Other Other 209 1386 0 926 284 126 27 chr10 42683945 42684470 -97632295 + L1MC4a LINE L1 5324 5900 -1908 231 148 148 178 chr10 42684733 42684834 -97631931 - MLT2B1 LTR ERVL -14 506 409 802 248 165 18 chr10 42684859 42685260 -97631505 + MLT1H1 LTR MaLR 96 545 -10 899 142 131 6 chr10 42685620 42685796 -97630969 + L1P5 LINE L1 3 200 -6663 6639 116 162 9 chr10 42685796 42686329 -97630436 + L1P5 LINE L1 634 1084 -5779 2030 109 0 10 chr10 42686329 42686623 -97630142 - AluSq SINE Alu -22 291 1 6639 116 162 9 chr10 42686623 42687208 -97629557 + L1P5 LINE L1 1084 1914 -4949 1868 91 60 0 chr10 42687216 42687501 -97629264 - L1PBa LINE L1 -4434 2429 2128 * 13281 189 16 18 chr10 42687500 42690531 -97626234 + L1P5 LINE L1 3032 6043 -824 189 0 0 0 chr10 42690531 42690552 -97626213 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 13281 189 16 18 chr10 42690552 42690926 -97625839 + L1P5 LINE L1 6043 6416 -451 470 299 24 0 chr10 42691464 42691591 -97625174 + L2 LINE L2 3184 3313 0 * 786 304 121 56 chr10 42691575 42692067 -97624698 - L2 LINE L2 -7 3306 2707 2207 122 3 26 chr10 42692067 42692410 -97624355 + MER1B DNA MER1_type 3 337 0 786 304 121 56 chr10 42692410 42692728 -97624037 - L2 LINE L2 -606 2707 2411 556 239 73 76 chr10 42692866 42693167 -97623598 - L1MC4 LINE L1 -1 8041 7742 234 0 0 0 chr10 42693187 42693213 -97623552 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 4133 35 2 0 chr10 42693213 42693693 -97623072 - L1PA3 LINE L1 -13 6142 5662 2989 61 10 15 chr10 42693693 42694087 -97622678 + L1PB1 LINE L1 5716 6107 -44 24 0 0 0 chr10 42694088 42694112 -97622653 + AT_rich Low_complexity Low_complexity 1 24 0 769 265 20 0 chr10 42694588 42694788 -97621977 + MER58A DNA MER1_type 18 221 -3 1005 155 0 0 chr10 42694937 42695098 -97621667 + AluSg/x SINE Alu 134 294 -18 737 315 113 38 chr10 42695099 42695756 -97621009 + L1ME4a LINE L1 5255 5964 -157 203 138 0 0 chr10 42695756 42695785 -97620980 + (TG)n Simple_repeat Simple_repeat 2 30 0 633 270 139 37 chr10 42695850 42696309 -97620456 - MLT1J LTR MaLR -2 509 4 334 264 111 69 chr10 42696336 42696552 -97620213 + HAL1 LINE L1 1428 1652 -855 800 130 0 0 chr10 42696564 42696679 -97620086 + AluJb SINE Alu 1 115 -197 210 91 0 0 chr10 42696685 42696718 -97620047 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 1427 224 23 1 chr10 42696921 42697243 -97619522 + L1MDa LINE L1 4 456 -6087 1883 180 50 50 chr10 42697243 42697748 -97619017 - MLT1D LTR MaLR 0 505 1 1899 232 26 113 chr10 42697750 42698449 -97618316 - MLT1D-int LTR MaLR -2 1369 732 * 3403 205 103 63 chr10 42698447 42699138 -97617627 + L1MDa LINE L1 458 1120 -5420 2107 102 3 0 chr10 42699138 42699432 -97617333 + AluSq SINE Alu 1 295 -18 3403 205 103 63 chr10 42699432 42700027 -97616738 + L1MDa LINE L1 1120 1820 -4720 21 0 0 0 chr10 42700083 42700104 -97616661 + AT_rich Low_complexity Low_complexity 1 21 0 1597 165 15 11 chr10 42700120 42700392 -97616373 - MLT2B1 LTR ERVL -246 274 2 473 179 56 78 chr10 42700406 42700597 -97616168 - L1MC4 LINE L1 -1073 6820 6546 1491 196 14 7 chr10 42700598 42700884 -97615881 + LOR1b LTR ERV1 66 353 -108 388 81 203 14 chr10 42700872 42700946 -97615819 + LOR1a LTR ERV1 410 497 0 * 391 287 111 62 chr10 42700946 42701642 -97615123 - L1MCa LINE L1 -2248 4178 3449 1426 169 73 11 chr10 42701905 42702178 -97614587 + AluJo SINE Alu 3 292 -20 2288 93 0 0 chr10 42702206 42702508 -97614257 + AluSc SINE Alu 1 302 -7 304 296 74 31 chr10 42702520 42702844 -97613921 - L1MCa LINE L1 -3335 3091 2754 533 170 0 10 chr10 42703020 42703120 -97613645 + L1MB1 LINE L1 6007 6105 -63 394 143 0 0 chr10 42703120 42703183 -97613582 + AluJ/FRAM SINE Alu 226 288 -14 450 120 0 0 chr10 42703200 42703275 -97613490 + L1MB1 LINE L1 6093 6167 -1 890 232 5 0 chr10 42703313 42703520 -97613245 + HsTC2 DNA Tc2 93 300 -1598 * 2502 213 92 35 chr10 42703515 42703941 -97612824 + HsTC2 DNA Tc2 561 961 -937 1884 135 17 0 chr10 42703941 42704238 -97612527 + AluSx SINE Alu 1 302 -10 2502 213 92 35 chr10 42704238 42704682 -97612083 + HsTC2 DNA Tc2 961 1652 -246 1654 138 47 0 chr10 42704743 42704997 -97611768 - AluSg SINE Alu -24 286 21 472 258 54 84 chr10 42705002 42705321 -97611444 - L1MCa LINE L1 -3949 2477 2246 510 311 113 22 chr10 42705644 42706149 -97610616 - HAL1 LINE L1 -849 1658 1108 620 246 95 3 chr10 42706192 42706495 -97610270 - L1MC/D LINE L1 -734 5436 5335 440 184 62 9 chr10 42706495 42706613 -97610152 - L1 LINE L1 -753 5393 5264 1322 326 85 60 chr10 42706657 42707419 -97609346 - L1 LINE L1 -1833 4313 3498 2054 178 88 9 chr10 42707419 42707852 -97608913 - MLT1C LTR MaLR 0 467 1 1322 326 85 60 chr10 42707852 42708272 -97608493 - L1 LINE L1 -2648 3498 3090 510 267 32 97 chr10 42708298 42708647 -97608118 - L1ME1 LINE L1 -16 6150 5828 2480 75 16 0 chr10 42709188 42709494 -97607271 - AluY SINE Alu 0 311 1 698 204 247 55 chr10 42709753 42710097 -97606668 + LTR16A1 LTR ERVL 1 410 -47 292 239 15 15 chr10 42710296 42710363 -97606402 - L2 LINE L2 0 3313 3247 211 289 0 0 chr10 42710752 42710804 -97605961 - MIR SINE MIR -116 146 95 219 358 75 0 chr10 42710807 42710941 -97605824 + L2 LINE L2 2272 2415 -899 806 266 82 11 chr10 42711928 42712282 -97604483 + L1ME4a LINE L1 5529 5907 -214 338 110 36 15 chr10 42712346 42712413 -97604352 + MER5A DNA MER1_type 4 71 -118 191 229 29 86 chr10 42717816 42717886 -97598879 - L2 LINE L2 0 3272 3207 282 29 0 0 chr10 42718258 42718293 -97598472 + (CA)n Simple_repeat Simple_repeat 2 36 0 571 339 85 21 chr10 42720361 42720736 -97596029 + L1M4 LINE L1 4943 5341 -805 219 305 0 0 chr10 42721148 42721207 -97595558 + (TG)n Simple_repeat Simple_repeat 2 60 0 2220 93 33 13 chr10 42721764 42722064 -97594701 + AluSc SINE Alu 1 306 -3 1383 254 89 0 chr10 42722246 42722605 -97594160 + MER47B DNA MER2_type 28 418 0 271 257 124 0 chr10 42725962 42726075 -97590690 - L2 LINE L2 -360 2953 2827 1138 203 94 62 chr10 42726402 42726796 -97589969 + L1MD1 LINE L1 341 1047 -5493 * 4897 219 44 102 chr10 42726791 42727805 -97588960 + L1MD1 LINE L1 1345 2416 -4220 2293 76 31 7 chr10 42727805 42728095 -97588670 + AluY SINE Alu 1 297 -14 4897 219 44 102 chr10 42728095 42728816 -97587949 + L1MD1 LINE L1 2416 3177 -3459 2339 109 0 3 chr10 42728816 42729128 -97587637 - AluY SINE Alu 0 311 1 4897 219 44 102 chr10 42729128 42732907 -97583858 + L1MD1 LINE L1 3177 7173 537 342 0 0 0 chr10 42732907 42732945 -97583820 + (TG)n Simple_repeat Simple_repeat 1 38 0 2314 99 3 0 chr10 42732946 42733240 -97583525 - AluSp SINE Alu -18 295 1 4897 219 44 102 chr10 42733240 42733378 -97583387 + L1MD1 LINE L1 6492 6636 0 836 258 58 58 chr10 42733476 42733871 -97582894 - HAL1 LINE L1 -7 2500 2106 515 218 28 28 chr10 42733900 42734042 -97582723 - L2 LINE L2 -4 3309 3168 1097 250 64 5 chr10 42735542 42737287 -97579478 - L1M4 LINE L1 -1217 4929 2992 319 213 0 27 chr10 42737579 42737654 -97579111 - L1ME4a LINE L1 0 6121 6049 2240 133 3 0 chr10 42737739 42738100 -97578665 - L1PB1 LINE L1 -2 6149 5788 202 143 24 0 chr10 42738333 42738375 -97578390 + T-rich Low_complexity Low_complexity 3 45 0 1279 214 79 9 chr10 42738416 42738757 -97578008 - MLT1A1 LTR MaLR 0 365 1 274 156 0 0 chr10 42741686 42741731 -97575034 - MLT1L LTR MaLR -221 394 350 521 313 52 0 chr10 42742208 42742400 -97574365 - L3 LINE CR1 -65 1512 1311 1530 294 69 19 chr10 42742442 42743313 -97573452 + L1MEc LINE L1 969 1882 -4514 551 246 45 69 chr10 42743424 42743712 -97573053 + L1MEc LINE L1 1883 2163 -4233 751 296 25 8 chr10 42743712 42743952 -97572813 + MLT1D LTR MaLR 262 505 0 1785 225 211 20 chr10 42743954 42744550 -97572215 + L1MC4 LINE L1 330 1039 -5820 410 315 92 13 chr10 42744580 42744840 -97571925 - L1 LINE L1 -1073 5073 4791 385 323 56 56 chr10 42744893 42745212 -97571553 - L1MEd LINE L1 -5483 636 318 24 53 0 0 chr10 42745499 42745537 -97571228 + AT_rich Low_complexity Low_complexity 1 38 0 2048 154 0 13 chr10 42745815 42746120 -97570645 + AluJo SINE Alu 1 301 -11 4648 200 49 23 chr10 42749019 42750232 -97566533 - L1MD1 LINE L1 0 6242 4989 403 67 0 17 chr10 42750332 42750392 -97566373 + L1PB1 LINE L1 5913 5971 -180 24 32 0 0 chr10 42750392 42750423 -97566342 + AT_rich Low_complexity Low_complexity 1 31 0 368 253 19 29 chr10 42750423 42750527 -97566238 + L1MC4 LINE L1 2526 7513 -1340 339 281 25 39 chr10 42750502 42750673 -97566092 - L1MC4 LINE L1 -1316 6726 6613 * 21 36 0 0 chr10 42750681 42750709 -97566056 + AT_rich Low_complexity Low_complexity 1 28 0 3642 136 5 0 chr10 42750709 42751497 -97565268 - L1P5 LINE L1 -361 5790 4999 386 258 124 6 chr10 42751623 42751801 -97564964 - L1ME LINE L1 -328 5793 5595 1577 167 0 0 chr10 42754532 42754772 -97561993 - AluJo SINE Alu -72 240 1 250 333 61 0 chr10 42755698 42755830 -97560935 - L1ME LINE L1 -816 5330 5191 447 348 34 14 chr10 42756249 42756456 -97560309 - L1ME LINE L1 -1684 4462 4252 347 379 17 6 chr10 42756686 42756860 -97559905 - L1ME LINE L1 -2688 3458 3283 426 274 105 25 chr10 42760504 42760789 -97555976 - L1ME LINE L1 -3099 3047 2740 2233 94 33 3 chr10 42760842 42761141 -97555624 - AluSp SINE Alu -5 308 1 384 315 116 32 chr10 42761193 42761409 -97555356 - L1ME LINE L1 -3641 2505 2272 350 237 12 12 chr10 42761588 42761761 -97555004 + (CA)n Simple_repeat Simple_repeat 2 174 0 324 193 17 55 chr10 42761750 42761931 -97554834 + (CATA)n Simple_repeat Simple_repeat 4 177 0 * 227 288 14 0 chr10 42761932 42762005 -97554760 + (CA)n Simple_repeat Simple_repeat 1 74 0 242 329 41 0 chr10 42763513 42763586 -97553179 + MIR SINE MIR 112 187 -75 754 172 0 15 chr10 42765264 42765398 -97551367 + FLAM_C SINE Alu 2 133 0 1743 191 0 0 chr10 42765408 42765710 -97551055 + AluJb SINE Alu 1 302 0 264 200 57 0 chr10 42766486 42766556 -97550209 + MIR SINE MIR 109 182 -80 251 292 28 51 chr10 42767342 42767510 -97549255 - MIR3 SINE MIR -65 143 2 211 255 0 0 chr10 42768072 42768123 -97548642 - L2 LINE L2 -1 3312 3262 871 292 69 3 chr10 42768123 42768455 -97548310 - MLT1A1 LTR MaLR -9 356 3 223 308 53 15 chr10 42768537 42768670 -97548095 - L2 LINE L2 -307 3006 2869 220 296 235 16 chr10 42768664 42769043 -97547722 - L2 LINE L2 -579 2735 2274 * 376 246 109 9 chr10 42769743 42769853 -97546912 - MER117 DNA MER1_type -10 187 67 267 239 26 43 chr10 42772297 42772414 -97544351 + (TCTCTG)n Simple_repeat Simple_repeat 6 120 0 267 324 9 0 chr10 42776291 42776402 -97540363 - MER117 DNA MER1_type -37 160 49 4030 181 37 45 chr10 42776424 42777099 -97539666 + L1MB4 LINE L1 4644 5323 -857 1853 166 19 3 chr10 42777099 42777406 -97539359 + AluJb SINE Alu 1 312 0 4030 181 37 45 chr10 42777406 42778264 -97538501 + L1MB4 LINE L1 5323 6179 -1 890 253 161 29 chr10 42778532 42778978 -97537787 - MLT1D LTR MaLR 0 505 1 342 388 105 14 chr10 42779090 42779366 -97537399 + L1M4 LINE L1 2111 2411 -3735 252 86 0 0 chr10 42780105 42780140 -97536625 + (CA)n Simple_repeat Simple_repeat 1 35 0 376 313 16 0 chr10 42780558 42780686 -97536079 + MIR SINE MIR 6 135 -127 1117 296 90 21 chr10 42780968 42781445 -97535320 + MLT2B2 LTR ERVL 6 515 0 230 293 41 41 chr10 42781609 42781756 -97535009 + MIR SINE MIR 1 147 -115 315 269 38 113 chr10 42785405 42785591 -97531174 + HAL1 LINE L1 2 173 -2334 271 332 52 48 chr10 42785669 42785940 -97530825 + HAL1 LINE L1 423 694 -1813 2558 199 45 7 chr10 42786011 42786492 -97530273 - L1MC3 LINE L1 0 7854 7348 2574 136 24 24 chr10 42786492 42786947 -97529818 - L1PA16 LINE L1 -7 6159 5705 2558 199 45 7 chr10 42786947 42787014 -97529751 - L1MC3 LINE L1 -506 7348 7285 248 304 26 26 chr10 42787014 42787129 -97529636 - MLT1F1 LTR MaLR -429 138 24 2259 156 31 50 chr10 42787129 42787610 -97529155 - L1MC3 LINE L1 -700 7154 6683 1275 180 79 85 chr10 42787610 42788036 -97528729 + MLT2C2 LTR ERVL 1 464 0 5810 188 57 10 chr10 42788041 42789462 -97527303 - L1MC3 LINE L1 -743 5472 5187 831 117 0 29 chr10 42789504 42789641 -97527124 - FLAM_C SINE Alu 0 133 1 1604 236 137 19 chr10 42789652 42790294 -97526471 - L1MC3 LINE L1 -2378 3837 3092 2093 146 0 10 chr10 42790294 42790589 -97526176 - AluSx SINE Alu -20 292 1 1604 236 137 19 chr10 42790589 42790700 -97526065 - L1MC3 LINE L1 -3123 3092 2995 1007 122 6 61 chr10 42790700 42790922 -97525843 - FRAM SINE Alu 0 176 1 2351 109 0 0 chr10 42790946 42791249 -97525516 + AluSc SINE Alu 1 303 -6 2245 236 35 32 chr10 42791249 42791896 -97524869 - L1MC3 LINE L1 -3242 2973 2329 2438 78 0 23 chr10 42791896 42792202 -97524563 + AluY SINE Alu 1 299 -12 216 0 0 0 chr10 42792202 42792226 -97524539 + (TA)n Simple_repeat Simple_repeat 2 25 0 2245 236 35 32 chr10 42792226 42792318 -97524447 - L1MC3 LINE L1 -3885 2330 2231 2088 140 19 16 chr10 42792321 42792643 -97524122 - MER1B DNA MER1_type 0 339 17 251 146 0 42 chr10 42792647 42792695 -97524070 + MLT1A1 LTR MaLR 68 113 -252 5354 202 120 66 chr10 42792698 42794335 -97522430 + MLT1A1-int LTR MaLR 5 1729 -6 1902 191 9 3 chr10 42794412 42794758 -97522007 + MLT1A1 LTR MaLR 16 363 -2 528 241 41 21 chr10 42794760 42794905 -97521860 - L1MC3 LINE L1 -4699 1697 1550 5623 228 46 26 chr10 42794909 42795170 -97521595 + L1MB7 LINE L1 287 541 -6105 4640 164 18 30 chr10 42795170 42796084 -97520681 + MER4D LTR ERV1 1 903 0 5623 228 46 26 chr10 42796084 42797292 -97519473 + L1MB7 LINE L1 541 1864 -4782 1834 171 35 0 chr10 42797292 42797579 -97519186 + AluJo SINE Alu 1 297 -15 5623 228 46 26 chr10 42797579 42798197 -97518568 + L1MB7 LINE L1 1864 2468 -4178 459 0 0 0 chr10 42798198 42798249 -97518516 + (TA)n Simple_repeat Simple_repeat 1 51 0 2816 228 38 11 chr10 42798252 42799068 -97517697 + L1MB7 LINE L1 2612 3449 -3195 2344 124 3 3 chr10 42799074 42799429 -97517336 + THE1A LTR MaLR 1 355 0 359 184 83 0 chr10 42799435 42799544 -97517221 + L1MB7 LINE L1 3689 3806 -2838 27 29 0 0 chr10 42799559 42799593 -97517172 + AT_rich Low_complexity Low_complexity 1 34 0 9922 114 22 5 chr10 42799601 42801520 -97515245 - L1P4 LINE L1 -500 5668 3715 1291 218 146 23 chr10 42801526 42801966 -97514799 + L1MB7 LINE L1 4202 4695 -1949 21 57 0 0 chr10 42802322 42802357 -97514408 + AT_rich Low_complexity Low_complexity 1 35 0 657 234 13 0 chr10 42803334 42803492 -97513273 + L1MB7 LINE L1 4709 4868 -1776 1683 176 6 42 chr10 42803493 42803805 -97512960 + AluJo SINE Alu 1 301 -11 248 175 35 0 chr10 42803806 42803863 -97512902 + GA-rich Low_complexity Low_complexity 1 59 0 992 266 30 32 chr10 42803881 42804253 -97512512 + L1MB7 LINE L1 6194 6564 -118 27 29 0 0 chr10 42804988 42805022 -97511743 + GC_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr10 42805123 42805145 -97511620 + GC_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr10 42805180 42805206 -97511559 + GC_rich Low_complexity Low_complexity 1 26 0 213 283 50 0 chr10 42805490 42805550 -97511215 + MIR SINE MIR 90 152 -56 238 274 80 26 chr10 42807547 42807660 -97509105 - MIR SINE MIR -55 207 89 904 226 113 28 chr10 42810005 42810056 -97506709 + MER58B DNA MER1_type 37 82 -2338 1990 110 28 0 chr10 42810056 42810387 -97506378 - AluSg SINE Alu 0 310 1 904 226 113 28 chr10 42810387 42810583 -97506182 + MER58B DNA MER1_type 82 305 -36 374 309 133 5 chr10 42810840 42811050 -97505715 - MIR SINE MIR 0 262 26 397 279 32 50 chr10 42811112 42811356 -97505409 - L1MC4a LINE L1 -305 5816 5600 396 0 0 0 chr10 42811379 42811423 -97505342 + (TG)n Simple_repeat Simple_repeat 1 44 0 346 203 141 55 chr10 42811423 42811551 -97505214 - MIR3 SINE MIR 0 208 70 1705 224 35 29 chr10 42812687 42813174 -97503591 - L1ME1 LINE L1 -5 6161 5672 1195 220 7 14 chr10 42813174 42813451 -97503314 - MER93b LTR ERV1 0 373 99 1488 157 83 43 chr10 42813452 42813752 -97503013 - AluJo SINE Alu 0 312 1 431 196 33 11 chr10 42813924 42814016 -97502749 - L1ME1 LINE L1 -491 5675 5582 1921 174 34 32 chr10 42814077 42814630 -97502135 - MLT2A2 LTR ERVL 0 554 1 769 177 14 34 chr10 42814630 42814777 -97501988 + FRAM SINE Alu 2 145 -31 6706 206 70 24 chr10 42814836 42815007 -97501758 - L1ME1 LINE L1 -611 5555 5393 2809 3 0 0 chr10 42815007 42815317 -97501448 - AluYa5 SINE Alu -1 310 1 6706 206 70 24 chr10 42815317 42817116 -97499649 - L1ME1 LINE L1 -773 5393 3678 216 0 0 0 chr10 42817116 42817140 -97499625 +